Query 002158
Match_columns 958
No_of_seqs 988 out of 6961
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 17:49:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.9E-77 4.2E-82 763.0 64.8 820 34-904 24-956 (968)
2 KOG1187 Serine/threonine prote 100.0 3.1E-51 6.7E-56 454.4 28.9 285 611-901 61-354 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1E-46 2.2E-51 414.6 27.6 258 631-906 47-310 (362)
4 KOG0581 Mitogen-activated prot 100.0 7E-46 1.5E-50 386.3 19.2 243 630-895 84-335 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 4.6E-45 1E-49 398.1 22.7 252 630-901 211-463 (468)
6 KOG0595 Serine/threonine-prote 100.0 2.4E-44 5.2E-49 377.3 22.9 249 625-894 10-267 (429)
7 KOG0575 Polo-like serine/threo 100.0 3.6E-44 7.8E-49 394.1 22.5 248 625-895 18-269 (592)
8 KOG1026 Nerve growth factor re 100.0 2.6E-44 5.6E-49 410.3 17.2 266 621-904 482-767 (774)
9 KOG0615 Serine/threonine prote 100.0 8E-44 1.7E-48 372.2 14.8 251 623-895 170-437 (475)
10 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-43 2.9E-48 394.8 15.5 261 627-905 631-897 (996)
11 KOG0591 NIMA (never in mitosis 100.0 8.4E-44 1.8E-48 353.9 10.5 256 626-898 20-284 (375)
12 KOG0193 Serine/threonine prote 100.0 1.4E-42 3E-47 378.9 16.4 272 618-907 385-661 (678)
13 KOG0598 Ribosomal protein S6 k 100.0 5.4E-42 1.2E-46 357.3 18.4 249 624-894 24-280 (357)
14 KOG0592 3-phosphoinositide-dep 100.0 6.7E-41 1.5E-45 361.6 22.8 256 624-895 72-338 (604)
15 KOG4721 Serine/threonine prote 100.0 3.2E-42 6.8E-47 370.2 11.7 240 629-899 128-368 (904)
16 KOG0198 MEKK and related serin 100.0 2.3E-41 5.1E-46 360.4 16.8 256 626-898 18-279 (313)
17 KOG0582 Ste20-like serine/thre 100.0 1.8E-40 3.8E-45 350.4 22.2 264 625-895 26-293 (516)
18 KOG0593 Predicted protein kina 100.0 3.6E-41 7.8E-46 338.5 14.3 258 626-895 3-284 (396)
19 KOG0578 p21-activated serine/t 100.0 7.1E-41 1.5E-45 365.3 17.2 250 625-895 273-523 (550)
20 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.2E-40 6.9E-45 370.6 22.4 262 623-901 5-336 (338)
21 KOG0661 MAPK related serine/th 100.0 6.2E-41 1.3E-45 356.5 15.4 259 624-895 9-291 (538)
22 KOG0597 Serine-threonine prote 100.0 1.2E-40 2.6E-45 358.7 17.5 247 625-895 2-251 (808)
23 KOG1095 Protein tyrosine kinas 100.0 4.2E-40 9.2E-45 389.5 23.5 264 625-906 692-968 (1025)
24 KOG0194 Protein tyrosine kinas 100.0 2.5E-40 5.3E-45 367.6 19.7 269 618-906 150-427 (474)
25 KOG1094 Discoidin domain recep 100.0 4.5E-40 9.7E-45 355.5 20.3 265 623-899 536-804 (807)
26 KOG0616 cAMP-dependent protein 100.0 4.3E-40 9.3E-45 330.5 18.2 236 625-886 44-283 (355)
27 KOG0659 Cdk activating kinase 100.0 9.6E-40 2.1E-44 323.4 19.4 258 626-895 3-281 (318)
28 KOG3653 Transforming growth fa 100.0 4.9E-39 1.1E-43 341.8 26.1 263 630-904 215-508 (534)
29 PHA02988 hypothetical protein; 100.0 4.7E-39 1E-43 351.2 26.5 261 610-900 10-280 (283)
30 KOG0600 Cdc2-related protein k 100.0 8.3E-40 1.8E-44 350.5 18.5 259 626-895 118-400 (560)
31 KOG0583 Serine/threonine prote 100.0 2.7E-39 5.9E-44 359.6 21.2 249 623-894 15-274 (370)
32 KOG4278 Protein tyrosine kinas 100.0 6.5E-40 1.4E-44 354.7 14.7 263 618-900 260-524 (1157)
33 KOG0580 Serine/threonine prote 100.0 9.2E-40 2E-44 319.1 12.5 250 623-895 20-273 (281)
34 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-38 2.4E-43 349.0 22.4 251 627-895 2-261 (285)
35 KOG0201 Serine/threonine prote 100.0 5.5E-40 1.2E-44 347.0 10.0 249 625-895 13-263 (467)
36 cd05104 PTKc_Kit Catalytic dom 100.0 1.4E-38 2.9E-43 361.5 21.9 259 624-899 34-374 (375)
37 cd05096 PTKc_DDR1 Catalytic do 100.0 3.8E-38 8.3E-43 348.3 24.7 262 625-897 5-303 (304)
38 cd05571 STKc_PKB Catalytic dom 100.0 3.2E-38 7E-43 351.7 23.6 242 631-895 1-251 (323)
39 PTZ00263 protein kinase A cata 100.0 3.3E-38 7.3E-43 352.4 23.4 245 625-895 18-271 (329)
40 cd05106 PTKc_CSF-1R Catalytic 100.0 2.6E-38 5.6E-43 358.9 22.5 262 622-900 35-373 (374)
41 KOG4257 Focal adhesion tyrosin 100.0 1.1E-38 2.5E-43 346.2 17.6 260 621-901 385-651 (974)
42 cd05612 STKc_PRKX_like Catalyt 100.0 1E-38 2.3E-43 350.3 17.7 245 625-895 1-254 (291)
43 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.2E-38 1.3E-42 339.6 23.1 255 625-899 5-265 (266)
44 PF07714 Pkinase_Tyr: Protein 100.0 3.3E-38 7.1E-43 340.2 19.6 249 630-896 4-259 (259)
45 KOG0588 Serine/threonine prote 100.0 1.2E-38 2.7E-43 350.6 16.3 245 627-895 14-263 (786)
46 KOG2052 Activin A type IB rece 100.0 6E-38 1.3E-42 331.0 20.7 270 620-901 206-505 (513)
47 KOG0663 Protein kinase PITSLRE 100.0 6.6E-38 1.4E-42 319.2 19.6 258 626-895 77-361 (419)
48 KOG0605 NDR and related serine 100.0 7.7E-38 1.7E-42 338.7 21.3 261 622-895 138-445 (550)
49 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-37 2.3E-42 341.7 22.6 259 626-895 2-284 (287)
50 cd05595 STKc_PKB_beta Catalyti 100.0 2.2E-37 4.7E-42 344.9 25.4 242 631-895 1-251 (323)
51 KOG0694 Serine/threonine prote 100.0 1.8E-38 3.8E-43 352.9 16.2 244 622-889 365-613 (694)
52 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 8.8E-38 1.9E-42 349.9 21.6 252 626-895 2-257 (333)
53 KOG1989 ARK protein kinase fam 100.0 7.5E-38 1.6E-42 359.7 21.3 263 625-903 37-315 (738)
54 PTZ00426 cAMP-dependent protei 100.0 7.1E-38 1.5E-42 350.5 20.5 245 625-895 30-284 (340)
55 cd05072 PTKc_Lyn Catalytic dom 100.0 1.6E-37 3.5E-42 335.2 22.5 255 624-898 5-260 (261)
56 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-37 2.6E-42 340.6 21.7 255 626-898 6-282 (283)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 3.1E-37 6.6E-42 345.0 25.0 259 624-896 4-302 (331)
58 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.2E-37 4.9E-42 352.5 24.1 262 623-901 35-399 (400)
59 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.3E-37 4.9E-42 333.1 22.8 251 625-896 4-255 (256)
60 KOG0585 Ca2+/calmodulin-depend 100.0 7.3E-38 1.6E-42 332.4 18.0 257 623-897 95-374 (576)
61 cd05052 PTKc_Abl Catalytic dom 100.0 3.2E-37 7E-42 333.3 23.5 255 625-899 6-262 (263)
62 cd05148 PTKc_Srm_Brk Catalytic 100.0 1E-37 2.3E-42 336.7 19.6 256 623-898 4-260 (261)
63 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-37 2.8E-42 345.1 20.6 240 633-895 1-247 (312)
64 cd05108 PTKc_EGFR Catalytic do 100.0 3.7E-37 8E-42 342.3 24.3 260 624-903 6-272 (316)
65 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-37 2.7E-42 347.4 20.3 242 631-895 1-251 (328)
66 cd05068 PTKc_Frk_like Catalyti 100.0 3.2E-37 6.9E-42 333.0 22.8 256 623-898 4-260 (261)
67 cd05094 PTKc_TrkC Catalytic do 100.0 4.6E-37 1E-41 337.4 24.4 261 626-904 6-287 (291)
68 cd05589 STKc_PKN Catalytic dom 100.0 5.3E-37 1.2E-41 342.1 25.2 245 627-895 1-257 (324)
69 cd05584 STKc_p70S6K Catalytic 100.0 6E-37 1.3E-41 341.5 25.4 242 631-895 2-256 (323)
70 cd05605 STKc_GRK4_like Catalyt 100.0 3.1E-37 6.8E-42 337.6 22.2 252 626-895 1-261 (285)
71 cd05033 PTKc_EphR Catalytic do 100.0 7.9E-37 1.7E-41 330.9 25.0 257 624-899 3-265 (266)
72 KOG0611 Predicted serine/threo 100.0 3.4E-38 7.4E-43 326.8 13.4 247 625-896 53-304 (668)
73 cd05093 PTKc_TrkB Catalytic do 100.0 3.2E-37 7E-42 338.1 22.0 261 625-903 5-283 (288)
74 cd05054 PTKc_VEGFR Catalytic d 100.0 3E-37 6.5E-42 345.4 21.9 261 624-901 6-335 (337)
75 cd07862 STKc_CDK6 Catalytic do 100.0 6E-37 1.3E-41 336.3 23.7 258 626-895 2-287 (290)
76 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.8E-37 1.3E-41 336.0 23.5 259 625-895 5-285 (288)
77 cd05049 PTKc_Trk Catalytic dom 100.0 5.1E-37 1.1E-41 335.0 22.8 255 625-897 5-279 (280)
78 PTZ00267 NIMA-related protein 100.0 4.5E-37 9.8E-42 359.6 23.9 252 626-895 68-323 (478)
79 cd05601 STKc_CRIK Catalytic do 100.0 3.9E-37 8.5E-42 344.3 22.0 253 625-895 1-263 (330)
80 cd05594 STKc_PKB_alpha Catalyt 100.0 3.8E-37 8.2E-42 343.5 21.6 242 631-895 1-252 (325)
81 KOG2345 Serine/threonine prote 100.0 3.8E-38 8.2E-43 309.0 11.3 267 624-900 20-301 (302)
82 cd05062 PTKc_IGF-1R Catalytic 100.0 3E-37 6.5E-42 336.3 19.8 257 623-897 4-276 (277)
83 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-36 2.3E-41 338.2 24.4 241 631-894 1-247 (316)
84 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-36 2.8E-41 340.4 25.2 250 626-895 1-267 (332)
85 KOG0199 ACK and related non-re 100.0 1.7E-37 3.7E-42 341.2 17.5 248 630-896 115-369 (1039)
86 KOG1025 Epidermal growth facto 100.0 1.1E-37 2.3E-42 348.4 15.9 255 628-902 699-960 (1177)
87 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.9E-37 1.7E-41 328.9 22.2 251 626-897 5-256 (256)
88 cd05629 STKc_NDR_like_fungal C 100.0 1.4E-36 3.1E-41 346.0 25.6 256 625-895 1-305 (377)
89 KOG0577 Serine/threonine prote 100.0 1.1E-37 2.3E-42 336.7 15.2 245 626-895 27-278 (948)
90 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-36 2.9E-41 344.8 25.2 258 625-895 1-296 (364)
91 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-36 3E-41 339.8 24.7 258 624-895 4-299 (333)
92 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.4E-37 1.4E-41 343.9 22.1 260 626-895 1-290 (338)
93 KOG0589 Serine/threonine prote 100.0 1.9E-37 4.1E-42 337.9 17.1 251 625-895 4-258 (426)
94 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-36 2.5E-41 332.8 23.4 256 625-898 5-282 (283)
95 cd05071 PTKc_Src Catalytic dom 100.0 1.6E-36 3.5E-41 327.7 24.1 255 625-900 6-261 (262)
96 KOG4279 Serine/threonine prote 100.0 2.5E-37 5.5E-42 338.6 17.7 244 632-894 582-831 (1226)
97 cd05626 STKc_LATS2 Catalytic d 100.0 1.2E-36 2.5E-41 347.0 24.1 258 626-895 2-305 (381)
98 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.9E-36 4.2E-41 326.7 24.4 253 625-898 6-259 (260)
99 cd05628 STKc_NDR1 Catalytic do 100.0 3.9E-36 8.5E-41 340.5 27.7 259 625-895 1-293 (363)
100 cd05590 STKc_nPKC_eta Catalyti 100.0 4.2E-37 9E-42 342.1 19.1 236 631-889 1-241 (320)
101 PHA03212 serine/threonine kina 100.0 6.5E-37 1.4E-41 348.6 21.1 253 625-895 92-376 (391)
102 cd05059 PTKc_Tec_like Catalyti 100.0 1.4E-36 3.1E-41 326.9 22.5 250 626-896 5-255 (256)
103 cd05620 STKc_nPKC_delta Cataly 100.0 1.6E-36 3.5E-41 336.8 23.6 241 631-894 1-247 (316)
104 cd05607 STKc_GRK7 Catalytic do 100.0 1.8E-36 3.9E-41 330.1 23.4 248 633-897 1-252 (277)
105 cd05591 STKc_nPKC_epsilon Cata 100.0 9.6E-37 2.1E-41 339.6 21.5 242 631-895 1-254 (321)
106 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-36 4.3E-41 334.4 23.8 260 624-895 4-288 (303)
107 cd05603 STKc_SGK2 Catalytic do 100.0 1.2E-36 2.6E-41 339.0 22.2 237 631-890 1-242 (321)
108 cd05582 STKc_RSK_N N-terminal 100.0 1.1E-36 2.4E-41 338.8 21.8 238 631-891 2-245 (318)
109 cd05111 PTK_HER3 Pseudokinase 100.0 2.7E-36 5.9E-41 329.1 24.5 259 625-903 7-272 (279)
110 cd08228 STKc_Nek6 Catalytic do 100.0 3.3E-36 7.1E-41 326.2 25.0 257 625-899 2-265 (267)
111 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.2E-36 4.7E-41 326.3 23.5 254 624-898 5-259 (260)
112 cd05588 STKc_aPKC Catalytic do 100.0 7E-37 1.5E-41 341.7 20.1 251 631-895 1-262 (329)
113 KOG0658 Glycogen synthase kina 100.0 1.7E-37 3.7E-42 322.8 13.9 254 626-895 25-306 (364)
114 cd05587 STKc_cPKC Catalytic do 100.0 7.2E-37 1.6E-41 341.1 20.0 241 626-889 1-246 (324)
115 cd05053 PTKc_FGFR Catalytic do 100.0 1.4E-36 3.1E-41 333.9 22.1 261 622-900 9-292 (293)
116 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.5E-36 3.2E-41 342.7 22.8 258 625-895 1-285 (350)
117 cd05055 PTKc_PDGFR Catalytic d 100.0 2.7E-36 5.9E-41 332.9 24.3 260 623-899 33-301 (302)
118 PLN00034 mitogen-activated pro 100.0 8.8E-37 1.9E-41 344.5 20.7 246 627-895 76-328 (353)
119 cd05608 STKc_GRK1 Catalytic do 100.0 1.7E-36 3.7E-41 330.9 22.3 246 633-895 1-257 (280)
120 cd05618 STKc_aPKC_iota Catalyt 100.0 6.6E-37 1.4E-41 341.8 19.5 251 631-895 1-262 (329)
121 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.7E-36 5.9E-41 329.8 23.9 265 626-900 5-282 (283)
122 cd08529 STKc_FA2-like Catalyti 100.0 2.2E-36 4.8E-41 325.2 22.7 250 626-895 1-253 (256)
123 PTZ00283 serine/threonine prot 100.0 6.6E-37 1.4E-41 358.2 19.9 256 622-895 29-297 (496)
124 cd05045 PTKc_RET Catalytic dom 100.0 3.6E-36 7.8E-41 330.1 24.5 258 626-901 1-288 (290)
125 cd05107 PTKc_PDGFR_beta Cataly 100.0 2E-36 4.4E-41 344.4 23.2 263 621-900 33-400 (401)
126 cd05596 STKc_ROCK Catalytic do 100.0 9.7E-37 2.1E-41 345.7 20.4 252 623-895 41-304 (370)
127 cd05084 PTKc_Fes Catalytic dom 100.0 2.7E-36 5.9E-41 323.8 22.8 248 631-897 1-251 (252)
128 cd05043 PTK_Ryk Pseudokinase d 100.0 2.7E-36 5.8E-41 329.4 23.1 262 623-902 4-279 (280)
129 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-36 2.6E-41 337.6 20.5 241 631-894 1-247 (316)
130 cd05069 PTKc_Yes Catalytic dom 100.0 4.1E-36 8.9E-41 324.1 24.1 253 625-898 6-259 (260)
131 cd05598 STKc_LATS Catalytic do 100.0 1.6E-36 3.5E-41 345.6 21.9 257 626-895 2-301 (376)
132 cd05089 PTKc_Tie1 Catalytic do 100.0 3.6E-36 7.8E-41 331.3 23.9 258 625-903 2-279 (297)
133 cd05092 PTKc_TrkA Catalytic do 100.0 3.3E-36 7.2E-41 328.6 23.4 254 626-897 6-279 (280)
134 cd05091 PTKc_Ror2 Catalytic do 100.0 1.2E-36 2.6E-41 332.7 19.8 254 627-898 7-282 (283)
135 cd05570 STKc_PKC Catalytic dom 100.0 1E-36 2.2E-41 338.8 19.6 242 631-895 1-252 (318)
136 cd05075 PTKc_Axl Catalytic dom 100.0 4.9E-36 1.1E-40 325.7 24.5 254 628-899 2-271 (272)
137 cd05616 STKc_cPKC_beta Catalyt 100.0 2.7E-36 5.8E-41 336.3 23.0 241 626-889 1-246 (323)
138 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.9E-36 6.4E-41 329.8 22.8 267 625-899 4-283 (284)
139 cd05115 PTKc_Zap-70 Catalytic 100.0 4.9E-36 1.1E-40 322.9 24.1 249 632-899 2-255 (257)
140 cd05116 PTKc_Syk Catalytic dom 100.0 4E-36 8.6E-41 323.6 23.4 248 632-899 2-255 (257)
141 cd05035 PTKc_Axl_like Catalyti 100.0 5.2E-36 1.1E-40 325.6 24.5 255 627-899 1-272 (273)
142 cd05621 STKc_ROCK2 Catalytic d 100.0 1.8E-36 3.9E-41 343.1 21.5 256 619-895 37-304 (370)
143 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.8E-36 6E-41 327.0 22.0 258 624-899 4-267 (268)
144 KOG0594 Protein kinase PCTAIRE 100.0 1.3E-36 2.9E-41 317.4 18.6 259 626-895 12-302 (323)
145 PRK13184 pknD serine/threonine 100.0 4.6E-36 1E-40 358.6 25.8 270 625-905 2-296 (932)
146 cd05039 PTKc_Csk_like Catalyti 100.0 5.3E-36 1.1E-40 322.4 23.8 249 625-898 6-255 (256)
147 cd05034 PTKc_Src_like Catalyti 100.0 4.1E-36 9E-41 324.2 22.8 256 623-898 4-260 (261)
148 cd05632 STKc_GRK5 Catalytic do 100.0 4.4E-36 9.6E-41 328.4 23.4 251 627-895 2-261 (285)
149 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.6E-36 7.9E-41 338.0 23.2 262 624-902 6-342 (343)
150 cd05575 STKc_SGK Catalytic dom 100.0 3.3E-36 7.1E-41 335.6 22.5 237 631-890 1-242 (323)
151 cd06654 STKc_PAK1 Catalytic do 100.0 6E-36 1.3E-40 329.2 24.1 250 625-895 20-270 (296)
152 cd06625 STKc_MEKK3_like Cataly 100.0 7.1E-36 1.5E-40 322.7 24.2 253 625-895 2-260 (263)
153 cd06646 STKc_MAP4K5 Catalytic 100.0 2.9E-36 6.2E-41 326.7 21.0 255 624-896 8-266 (267)
154 KOG0660 Mitogen-activated prot 100.0 8.5E-37 1.8E-41 317.1 15.9 262 623-895 20-310 (359)
155 KOG0574 STE20-like serine/thre 100.0 1.2E-38 2.6E-43 318.6 2.1 247 626-895 34-283 (502)
156 cd08229 STKc_Nek7 Catalytic do 100.0 5.5E-36 1.2E-40 324.4 23.0 256 626-900 3-266 (267)
157 cd05625 STKc_LATS1 Catalytic d 100.0 2.8E-36 6.1E-41 344.3 21.8 257 626-895 2-305 (382)
158 cd05061 PTKc_InsR Catalytic do 100.0 2.6E-36 5.7E-41 330.8 20.7 260 623-900 4-279 (288)
159 cd05082 PTKc_Csk Catalytic dom 100.0 6E-36 1.3E-40 322.0 23.1 248 625-898 6-255 (256)
160 cd05040 PTKc_Ack_like Catalyti 100.0 6.2E-36 1.4E-40 322.0 23.2 250 631-897 1-256 (257)
161 cd05088 PTKc_Tie2 Catalytic do 100.0 4.9E-36 1.1E-40 331.1 22.8 258 625-903 7-284 (303)
162 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.9E-36 1.1E-40 326.8 22.4 256 624-897 5-276 (277)
163 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.1E-35 2.3E-40 333.2 25.5 264 624-905 11-299 (334)
164 cd05101 PTKc_FGFR2 Catalytic d 100.0 8.2E-36 1.8E-40 329.7 24.2 262 623-902 13-299 (304)
165 cd05109 PTKc_HER2 Catalytic do 100.0 8.9E-36 1.9E-40 325.1 24.1 259 624-902 6-271 (279)
166 cd05066 PTKc_EphR_A Catalytic 100.0 7.1E-36 1.5E-40 323.6 23.2 257 625-899 4-266 (267)
167 cd05630 STKc_GRK6 Catalytic do 100.0 4.9E-36 1.1E-40 328.0 22.1 251 627-895 2-261 (285)
168 cd06637 STKc_TNIK Catalytic do 100.0 4.4E-36 9.5E-41 326.1 21.4 253 623-895 4-269 (272)
169 cd05085 PTKc_Fer Catalytic dom 100.0 1E-35 2.2E-40 319.0 23.8 247 631-897 1-249 (250)
170 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.7E-35 3.7E-40 320.4 25.8 257 625-900 2-266 (267)
171 cd08219 STKc_Nek3 Catalytic do 100.0 9.8E-36 2.1E-40 320.1 23.6 250 626-895 1-252 (255)
172 cd05602 STKc_SGK1 Catalytic do 100.0 4.9E-36 1.1E-40 334.5 22.0 242 631-895 1-247 (325)
173 cd05597 STKc_DMPK_like Catalyt 100.0 2.3E-35 5.1E-40 329.7 27.4 255 625-895 1-266 (331)
174 cd05032 PTKc_InsR_like Catalyt 100.0 3.6E-36 7.7E-41 327.8 20.3 256 624-897 5-276 (277)
175 cd05065 PTKc_EphR_B Catalytic 100.0 7.3E-36 1.6E-40 323.9 22.6 258 626-899 5-268 (269)
176 cd06631 STKc_YSK4 Catalytic do 100.0 1E-35 2.2E-40 322.0 23.6 255 626-894 1-261 (265)
177 KOG0610 Putative serine/threon 100.0 2.6E-36 5.5E-41 316.7 18.1 257 627-895 79-392 (459)
178 cd05099 PTKc_FGFR4 Catalytic d 100.0 7E-36 1.5E-40 331.7 22.4 264 623-904 10-298 (314)
179 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.2E-35 2.5E-40 328.9 24.0 261 624-902 17-302 (307)
180 cd05623 STKc_MRCK_alpha Cataly 100.0 2.3E-35 4.9E-40 330.1 26.6 255 625-895 1-266 (332)
181 cd05622 STKc_ROCK1 Catalytic d 100.0 5.3E-36 1.2E-40 339.6 21.6 261 617-896 35-305 (371)
182 cd06624 STKc_ASK Catalytic dom 100.0 1.1E-35 2.4E-40 322.3 23.2 257 620-895 3-265 (268)
183 cd05604 STKc_SGK3 Catalytic do 100.0 7.5E-36 1.6E-40 333.0 22.5 241 631-894 1-246 (325)
184 cd05097 PTKc_DDR_like Catalyti 100.0 9.1E-36 2E-40 327.8 22.8 263 624-897 4-294 (295)
185 cd05615 STKc_cPKC_alpha Cataly 100.0 4E-36 8.8E-41 334.7 20.2 242 626-890 1-247 (323)
186 cd06643 STKc_SLK Catalytic dom 100.0 9.2E-36 2E-40 325.5 22.6 250 627-895 7-262 (282)
187 cd05617 STKc_aPKC_zeta Catalyt 100.0 4E-36 8.7E-41 335.3 20.1 238 631-889 1-248 (327)
188 cd07876 STKc_JNK2 Catalytic do 100.0 8.8E-36 1.9E-40 337.3 23.2 256 624-895 20-315 (359)
189 cd05058 PTKc_Met_Ron Catalytic 100.0 1.6E-35 3.5E-40 319.7 24.2 254 631-901 1-261 (262)
190 cd05060 PTKc_Syk_like Catalyti 100.0 1.6E-35 3.4E-40 319.0 23.9 250 631-900 1-256 (257)
191 cd05050 PTKc_Musk Catalytic do 100.0 6.7E-36 1.4E-40 327.7 21.3 257 624-898 4-288 (288)
192 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.9E-35 4.1E-40 320.2 24.4 254 626-895 1-264 (267)
193 cd05056 PTKc_FAK Catalytic dom 100.0 1.8E-35 3.9E-40 321.0 24.1 257 624-901 5-267 (270)
194 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-35 3.3E-40 321.6 23.5 249 631-900 1-269 (270)
195 cd05624 STKc_MRCK_beta Catalyt 100.0 2.7E-35 5.8E-40 329.2 26.0 255 625-895 1-266 (331)
196 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-35 2.4E-40 325.2 22.4 267 625-899 4-283 (284)
197 cd07853 STKc_NLK Catalytic dom 100.0 8.7E-36 1.9E-40 338.9 22.4 258 626-895 1-288 (372)
198 cd05073 PTKc_Hck Catalytic dom 100.0 1.9E-35 4E-40 319.0 23.9 254 624-898 5-259 (260)
199 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-35 2.9E-40 331.3 23.4 261 630-895 3-307 (327)
200 cd05051 PTKc_DDR Catalytic dom 100.0 1.8E-35 3.8E-40 325.7 24.0 262 624-897 4-295 (296)
201 PTZ00036 glycogen synthase kin 100.0 5.9E-36 1.3E-40 346.1 21.1 256 624-895 65-351 (440)
202 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-35 3.3E-40 324.8 22.9 258 626-895 1-285 (288)
203 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2E-35 4.3E-40 320.5 23.5 252 632-897 2-268 (269)
204 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-35 2.3E-40 323.4 21.1 238 632-896 2-273 (274)
205 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-35 5.3E-40 324.6 24.2 262 625-898 5-296 (296)
206 cd00192 PTKc Catalytic domain 100.0 1.6E-35 3.5E-40 319.1 22.3 249 631-897 1-262 (262)
207 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-35 3.3E-40 328.2 22.7 259 625-895 6-286 (309)
208 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.7E-35 3.7E-40 319.6 22.3 239 631-896 1-261 (262)
209 cd06655 STKc_PAK2 Catalytic do 100.0 1.9E-35 4.1E-40 325.2 22.9 249 626-895 20-269 (296)
210 cd06615 PKc_MEK Catalytic doma 100.0 2.9E-35 6.3E-40 325.7 24.1 256 625-895 1-287 (308)
211 cd07874 STKc_JNK3 Catalytic do 100.0 1.5E-35 3.3E-40 334.9 22.2 257 623-895 15-311 (355)
212 KOG0599 Phosphorylase kinase g 100.0 1.8E-36 3.9E-41 299.8 12.7 254 622-895 14-283 (411)
213 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-37 3.7E-42 302.7 5.3 252 624-895 10-267 (355)
214 cd06656 STKc_PAK3 Catalytic do 100.0 1.7E-35 3.7E-40 325.8 21.8 250 625-895 19-269 (297)
215 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.8E-36 1.3E-40 322.5 17.6 239 631-896 1-257 (258)
216 cd06611 STKc_SLK_like Catalyti 100.0 1.7E-35 3.7E-40 323.0 21.4 253 624-895 4-262 (280)
217 cd08221 STKc_Nek9 Catalytic do 100.0 4.6E-35 9.9E-40 315.1 24.1 250 626-895 1-253 (256)
218 cd07875 STKc_JNK1 Catalytic do 100.0 2.6E-35 5.7E-40 334.1 23.2 256 624-895 23-318 (364)
219 cd06619 PKc_MKK5 Catalytic dom 100.0 2E-35 4.3E-40 322.3 21.4 249 626-895 2-253 (279)
220 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-35 4.5E-40 319.9 21.5 253 625-895 9-265 (267)
221 cd08223 STKc_Nek4 Catalytic do 100.0 5.4E-35 1.2E-39 314.6 24.4 250 626-895 1-254 (257)
222 cd06612 STKc_MST1_2 Catalytic 100.0 3.1E-35 6.7E-40 316.2 22.4 250 625-895 3-253 (256)
223 cd05041 PTKc_Fes_like Catalyti 100.0 4.9E-35 1.1E-39 313.9 23.8 248 631-897 1-250 (251)
224 PTZ00284 protein kinase; Provi 100.0 1.7E-35 3.6E-40 346.3 21.8 261 618-895 122-438 (467)
225 PHA03211 serine/threonine kina 100.0 1.1E-35 2.3E-40 342.4 19.7 256 624-895 168-455 (461)
226 cd05044 PTKc_c-ros Catalytic d 100.0 2.4E-35 5.3E-40 319.7 21.5 249 631-897 1-268 (269)
227 PTZ00266 NIMA-related protein 100.0 2.7E-35 5.9E-40 353.2 23.8 259 619-895 7-295 (1021)
228 cd06651 STKc_MEKK3 Catalytic d 100.0 6.5E-35 1.4E-39 315.9 24.6 252 625-895 2-261 (266)
229 cd06644 STKc_STK10_LOK Catalyt 100.0 4.1E-35 8.8E-40 322.1 23.3 252 625-895 12-269 (292)
230 cd05057 PTKc_EGFR_like Catalyt 100.0 4.2E-35 9.1E-40 319.8 23.1 260 625-904 7-273 (279)
231 cd05042 PTKc_Aatyk Catalytic d 100.0 5.7E-35 1.2E-39 316.9 24.0 251 632-896 2-267 (269)
232 PF00069 Pkinase: Protein kina 100.0 2.4E-35 5.2E-40 317.8 20.8 253 627-895 1-257 (260)
233 cd05112 PTKc_Itk Catalytic dom 100.0 4.6E-35 1E-39 315.0 22.9 250 626-896 5-255 (256)
234 cd08218 STKc_Nek1 Catalytic do 100.0 4.5E-35 9.8E-40 315.1 22.7 250 626-895 1-253 (256)
235 KOG0584 Serine/threonine prote 100.0 3E-36 6.5E-41 332.1 13.7 244 630-895 45-296 (632)
236 cd05083 PTKc_Chk Catalytic dom 100.0 3.6E-35 7.8E-40 315.6 21.5 247 625-898 6-253 (254)
237 cd06613 STKc_MAP4K3_like Catal 100.0 7.1E-35 1.5E-39 314.6 23.9 253 625-894 3-259 (262)
238 cd07861 STKc_CDK1_euk Catalyti 100.0 6.8E-35 1.5E-39 319.1 24.0 259 626-895 1-282 (285)
239 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-35 3.6E-40 335.1 19.5 256 625-895 1-293 (360)
240 KOG0032 Ca2+/calmodulin-depend 100.0 4.6E-35 9.9E-40 325.3 22.5 252 623-895 33-293 (382)
241 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.9E-35 8.5E-40 320.5 21.7 260 615-894 6-278 (282)
242 cd05046 PTK_CCK4 Pseudokinase 100.0 4.8E-35 1E-39 318.6 22.2 255 625-897 5-274 (275)
243 cd06652 STKc_MEKK2 Catalytic d 100.0 1.1E-34 2.3E-39 314.0 24.7 252 625-895 2-261 (265)
244 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.3E-35 7.2E-40 321.2 20.9 266 626-899 5-283 (284)
245 KOG4717 Serine/threonine prote 100.0 1.2E-35 2.6E-40 316.0 16.6 246 626-894 19-269 (864)
246 KOG0596 Dual specificity; seri 100.0 1.2E-35 2.7E-40 320.5 16.9 253 625-895 361-627 (677)
247 cd06640 STKc_MST4 Catalytic do 100.0 9.4E-35 2E-39 316.6 24.2 247 626-895 5-253 (277)
248 cd06632 STKc_MEKK1_plant Catal 100.0 9.7E-35 2.1E-39 312.7 24.0 248 626-895 1-255 (258)
249 KOG0579 Ste20-like serine/thre 100.0 1.2E-36 2.7E-41 329.9 9.1 251 626-895 33-289 (1187)
250 cd06638 STKc_myosinIIIA Cataly 100.0 2.8E-35 6E-40 322.4 20.0 263 615-896 8-284 (286)
251 KOG0667 Dual-specificity tyros 100.0 4.1E-35 9E-40 326.8 21.5 255 626-895 187-502 (586)
252 cd06609 STKc_MST3_like Catalyt 100.0 6.2E-35 1.3E-39 317.5 22.2 247 626-895 2-251 (274)
253 cd05110 PTKc_HER4 Catalytic do 100.0 8.1E-35 1.8E-39 321.5 23.3 259 624-902 6-271 (303)
254 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.5E-35 5.3E-40 321.2 18.8 246 627-895 6-253 (277)
255 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.4E-35 9.6E-40 320.5 20.8 258 625-896 5-267 (284)
256 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.1E-35 8.9E-40 329.8 21.1 256 623-895 13-298 (343)
257 cd05586 STKc_Sck1_like Catalyt 100.0 2E-35 4.3E-40 330.4 18.4 239 633-894 1-252 (330)
258 cd07868 STKc_CDK8 Catalytic do 100.0 6.1E-35 1.3E-39 324.7 22.1 196 630-835 6-218 (317)
259 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.5E-35 9.9E-40 320.7 20.5 251 626-895 2-262 (286)
260 cd06658 STKc_PAK5 Catalytic do 100.0 4.9E-35 1.1E-39 321.3 20.7 246 629-895 26-272 (292)
261 PHA03209 serine/threonine kina 100.0 2.8E-35 6.1E-40 332.4 19.2 254 623-895 64-351 (357)
262 cd08220 STKc_Nek8 Catalytic do 100.0 1E-34 2.3E-39 312.2 22.6 249 626-895 1-253 (256)
263 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.7E-35 1.5E-39 321.9 21.7 259 625-895 6-286 (301)
264 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.5E-34 3.3E-39 312.9 23.7 258 625-895 1-264 (267)
265 cd06659 STKc_PAK6 Catalytic do 100.0 6E-35 1.3E-39 321.4 20.6 245 630-895 26-271 (297)
266 cd05574 STKc_phototropin_like 100.0 1.5E-34 3.1E-39 321.6 23.8 256 626-894 2-288 (316)
267 PHA03207 serine/threonine kina 100.0 6.8E-35 1.5E-39 333.5 21.2 256 624-895 91-375 (392)
268 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.1E-34 4.5E-39 315.4 24.0 259 625-895 1-283 (286)
269 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.6E-34 3.5E-39 313.2 22.9 252 632-897 2-267 (268)
270 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.7E-34 3.7E-39 313.6 23.2 255 626-895 2-269 (272)
271 cd06639 STKc_myosinIIIB Cataly 100.0 1.2E-34 2.6E-39 318.2 22.0 262 615-895 12-287 (291)
272 cd07846 STKc_CDKL2_3 Catalytic 100.0 6.3E-35 1.4E-39 319.5 19.7 259 625-895 1-283 (286)
273 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.2E-34 2.6E-39 312.2 21.5 237 631-896 1-258 (259)
274 cd07867 STKc_CDC2L6 Catalytic 100.0 1.3E-34 2.8E-39 322.1 22.3 256 630-895 6-314 (317)
275 cd07860 STKc_CDK2_3 Catalytic 100.0 1.6E-34 3.4E-39 316.1 22.3 259 626-895 1-281 (284)
276 smart00219 TyrKc Tyrosine kina 100.0 2.4E-34 5.2E-39 309.5 23.4 251 627-896 1-258 (258)
277 cd05609 STKc_MAST Catalytic do 100.0 2.1E-34 4.5E-39 318.5 23.1 260 626-898 2-273 (305)
278 cd05580 STKc_PKA Catalytic dom 100.0 1.6E-34 3.5E-39 317.0 22.1 244 626-895 2-254 (290)
279 cd07832 STKc_CCRK Catalytic do 100.0 2.5E-34 5.4E-39 314.7 23.5 259 626-895 1-282 (286)
280 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-34 3.6E-39 313.9 21.5 254 623-895 4-272 (275)
281 cd06626 STKc_MEKK4 Catalytic d 100.0 4.3E-34 9.2E-39 308.9 24.4 252 626-894 1-260 (264)
282 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.9E-34 4.2E-39 315.1 22.0 250 625-895 1-261 (283)
283 cd08528 STKc_Nek10 Catalytic d 100.0 3.1E-34 6.7E-39 311.1 23.3 251 626-897 1-268 (269)
284 cd07841 STKc_CDK7 Catalytic do 100.0 2.8E-34 6.1E-39 316.4 23.2 258 626-895 1-282 (298)
285 cd06648 STKc_PAK_II Catalytic 100.0 4.2E-34 9.1E-39 312.8 24.2 248 627-895 21-269 (285)
286 cd06630 STKc_MEKK1 Catalytic d 100.0 3.6E-34 7.9E-39 310.3 23.3 256 626-895 1-264 (268)
287 KOG1024 Receptor-like protein 100.0 1.1E-34 2.5E-39 300.2 18.2 269 616-902 275-558 (563)
288 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.3E-34 7.2E-39 311.5 23.0 255 627-899 1-272 (273)
289 cd06605 PKc_MAPKK Catalytic do 100.0 2.3E-34 5E-39 311.2 21.6 248 626-895 2-257 (265)
290 cd06623 PKc_MAPKK_plant_like C 100.0 3.4E-34 7.4E-39 309.6 22.4 249 626-895 2-256 (264)
291 cd06647 STKc_PAK_I Catalytic d 100.0 2.3E-34 4.9E-39 316.2 21.2 250 625-895 19-269 (293)
292 cd07833 STKc_CDKL Catalytic do 100.0 2.9E-34 6.4E-39 314.5 21.7 258 626-894 2-284 (288)
293 cd06607 STKc_TAO Catalytic dom 100.0 4.4E-34 9.6E-39 316.2 23.2 245 625-895 15-267 (307)
294 cd08217 STKc_Nek2 Catalytic do 100.0 6.1E-34 1.3E-38 307.5 23.8 250 626-895 1-262 (265)
295 cd06641 STKc_MST3 Catalytic do 100.0 4.6E-34 1E-38 311.2 22.9 247 626-895 5-253 (277)
296 cd07839 STKc_CDK5 Catalytic do 100.0 1.7E-34 3.7E-39 315.7 19.3 258 626-895 1-281 (284)
297 cd08225 STKc_Nek5 Catalytic do 100.0 1.9E-34 4.1E-39 310.3 19.2 250 626-895 1-254 (257)
298 cd07835 STKc_CDK1_like Catalyt 100.0 4E-34 8.6E-39 312.7 22.0 258 627-895 1-280 (283)
299 cd06614 STKc_PAK Catalytic dom 100.0 7.7E-34 1.7E-38 311.0 23.4 253 623-895 17-270 (286)
300 cd07844 STKc_PCTAIRE_like Cata 100.0 7.5E-34 1.6E-38 311.9 23.2 258 625-894 5-287 (291)
301 cd08216 PK_STRAD Pseudokinase 100.0 7.3E-34 1.6E-38 315.6 23.1 258 632-895 9-295 (314)
302 cd07837 STKc_CdkB_plant Cataly 100.0 6.7E-34 1.4E-38 312.9 22.5 260 625-895 1-291 (295)
303 cd06917 STKc_NAK1_like Catalyt 100.0 6.5E-34 1.4E-38 310.0 21.9 247 626-895 2-255 (277)
304 cd08226 PK_STRAD_beta Pseudoki 100.0 1.2E-33 2.5E-38 315.9 24.2 261 632-895 5-308 (328)
305 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.9E-33 4E-38 308.1 25.3 255 626-895 2-266 (287)
306 PHA02882 putative serine/threo 100.0 9.4E-34 2E-38 311.4 22.9 263 625-896 12-293 (294)
307 cd07843 STKc_CDC2L1 Catalytic 100.0 9.4E-34 2E-38 311.5 22.9 259 625-895 5-290 (293)
308 cd05122 PKc_STE Catalytic doma 100.0 1.9E-33 4.1E-38 301.0 24.4 248 626-895 1-251 (253)
309 cd06616 PKc_MKK4 Catalytic dom 100.0 4.9E-34 1.1E-38 312.9 20.1 251 627-895 6-267 (288)
310 cd06635 STKc_TAO1 Catalytic do 100.0 1.7E-33 3.8E-38 312.9 24.6 247 627-898 27-280 (317)
311 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.1E-33 4.5E-38 303.8 24.6 252 625-895 2-261 (264)
312 cd06606 STKc_MAPKKK Catalytic 100.0 1.9E-33 4.1E-38 302.4 24.1 252 626-895 1-257 (260)
313 cd05578 STKc_Yank1 Catalytic d 100.0 3.5E-34 7.5E-39 308.7 18.3 246 626-894 1-254 (258)
314 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.9E-33 4E-38 308.8 24.2 260 624-895 4-288 (291)
315 cd05577 STKc_GRK Catalytic dom 100.0 9.9E-34 2.2E-38 308.6 21.8 241 633-891 1-245 (277)
316 cd05633 STKc_GRK3 Catalytic do 100.0 9.9E-34 2.1E-38 308.8 21.6 241 632-895 1-255 (279)
317 KOG0986 G protein-coupled rece 100.0 6.7E-35 1.5E-39 307.6 11.8 250 622-889 182-435 (591)
318 cd07836 STKc_Pho85 Catalytic d 100.0 1.8E-33 3.9E-38 307.7 22.9 259 626-895 1-281 (284)
319 cd06657 STKc_PAK4 Catalytic do 100.0 1.5E-33 3.3E-38 309.3 22.4 244 631-895 26-270 (292)
320 KOG4194 Membrane glycoprotein 100.0 1.7E-35 3.7E-40 320.0 6.4 385 65-455 48-493 (873)
321 PLN00009 cyclin-dependent kina 100.0 2.3E-33 5.1E-38 308.5 23.3 260 625-895 2-284 (294)
322 cd07850 STKc_JNK Catalytic dom 100.0 1.7E-33 3.6E-38 317.9 22.7 257 623-895 14-311 (353)
323 cd06627 STKc_Cdc7_like Catalyt 100.0 3.3E-33 7.1E-38 299.9 23.7 247 626-894 1-250 (254)
324 cd08215 STKc_Nek Catalytic dom 100.0 2E-33 4.4E-38 302.1 21.9 250 626-895 1-255 (258)
325 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-33 3.2E-38 304.5 20.8 241 633-894 1-251 (262)
326 cd07831 STKc_MOK Catalytic dom 100.0 2.9E-33 6.2E-38 305.7 22.3 255 627-895 1-279 (282)
327 cd07845 STKc_CDK10 Catalytic d 100.0 3.8E-33 8.2E-38 309.1 23.4 260 624-895 6-290 (309)
328 cd07838 STKc_CDK4_6_like Catal 100.0 4.4E-33 9.5E-38 305.0 23.5 257 627-895 1-284 (287)
329 cd07849 STKc_ERK1_2_like Catal 100.0 1.8E-33 4E-38 315.4 20.9 261 624-895 4-292 (336)
330 KOG0200 Fibroblast/platelet-de 100.0 1.8E-33 4E-38 334.9 22.1 264 620-901 291-581 (609)
331 cd05118 STKc_CMGC Catalytic do 100.0 4.3E-33 9.3E-38 304.4 22.6 257 627-895 1-280 (283)
332 cd07864 STKc_CDK12 Catalytic d 100.0 4.8E-33 1E-37 307.2 22.8 263 622-895 4-299 (302)
333 KOG4645 MAPKKK (MAP kinase kin 100.0 3.6E-35 7.9E-40 344.2 6.2 257 622-895 1232-1494(1509)
334 cd07842 STKc_CDK8_like Catalyt 100.0 4E-33 8.7E-38 309.9 22.1 262 626-895 1-313 (316)
335 cd06634 STKc_TAO2 Catalytic do 100.0 5.5E-33 1.2E-37 307.5 23.0 245 626-896 16-268 (308)
336 cd08530 STKc_CNK2-like Catalyt 100.0 5.3E-33 1.1E-37 298.8 21.8 248 626-895 1-253 (256)
337 cd07852 STKc_MAPK15 Catalytic 100.0 3.2E-33 7E-38 313.6 20.7 264 623-895 5-295 (337)
338 cd07865 STKc_CDK9 Catalytic do 100.0 7.7E-33 1.7E-37 306.7 23.5 263 625-895 12-307 (310)
339 KOG0983 Mitogen-activated prot 100.0 4.1E-34 9E-39 283.4 11.7 255 615-895 89-349 (391)
340 cd05611 STKc_Rim15_like Cataly 100.0 6.5E-33 1.4E-37 299.1 21.8 242 631-895 2-248 (260)
341 cd07840 STKc_CDK9_like Catalyt 100.0 7.3E-33 1.6E-37 303.1 22.6 258 627-895 1-284 (287)
342 cd05579 STKc_MAST_like Catalyt 100.0 2.5E-33 5.5E-38 302.7 18.7 248 633-896 1-255 (265)
343 cd07855 STKc_ERK5 Catalytic do 100.0 3.4E-33 7.3E-38 313.0 20.2 263 624-895 4-294 (334)
344 PHA03390 pk1 serine/threonine- 100.0 8.9E-33 1.9E-37 299.2 22.9 248 619-894 8-261 (267)
345 KOG0607 MAP kinase-interacting 100.0 7.1E-34 1.5E-38 287.3 13.2 269 616-895 74-361 (463)
346 KOG4250 TANK binding protein k 100.0 8.9E-34 1.9E-38 316.3 15.2 264 627-901 15-312 (732)
347 cd06618 PKc_MKK7 Catalytic dom 100.0 5.9E-33 1.3E-37 305.6 21.8 249 625-895 15-273 (296)
348 KOG0690 Serine/threonine prote 100.0 3.1E-34 6.6E-39 290.1 10.3 250 623-895 166-424 (516)
349 PLN00113 leucine-rich repeat r 100.0 7.5E-33 1.6E-37 353.5 25.8 325 86-420 236-588 (968)
350 cd06633 STKc_TAO3 Catalytic do 100.0 1.4E-32 2.9E-37 305.1 24.3 244 627-895 23-273 (313)
351 cd05583 STKc_MSK_N N-terminal 100.0 6.4E-33 1.4E-37 304.1 21.0 254 627-898 2-266 (288)
352 cd05606 STKc_beta_ARK Catalyti 100.0 7.5E-33 1.6E-37 301.8 21.3 241 632-894 1-254 (278)
353 cd05613 STKc_MSK1_N N-terminal 100.0 8.1E-33 1.8E-37 303.6 21.6 251 626-894 1-267 (290)
354 cd07879 STKc_p38delta_MAPK13 C 100.0 7.4E-33 1.6E-37 311.1 21.5 257 624-899 14-303 (342)
355 KOG0586 Serine/threonine prote 100.0 2E-33 4.2E-38 309.8 16.1 248 624-895 55-306 (596)
356 KOG1035 eIF-2alpha kinase GCN2 100.0 1.3E-33 2.8E-38 329.9 15.3 259 623-894 477-870 (1351)
357 KOG1006 Mitogen-activated prot 100.0 4.3E-35 9.3E-40 289.6 2.2 247 631-895 70-327 (361)
358 cd07830 STKc_MAK_like Catalyti 100.0 5.5E-33 1.2E-37 303.6 19.1 257 627-895 1-280 (283)
359 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.6E-32 3.4E-37 308.8 22.9 262 617-895 9-300 (345)
360 PTZ00024 cyclin-dependent prot 100.0 1.2E-32 2.7E-37 308.6 22.0 261 629-895 13-313 (335)
361 PHA03210 serine/threonine kina 100.0 5.1E-33 1.1E-37 326.5 19.6 263 622-895 145-454 (501)
362 cd05581 STKc_PDK1 Catalytic do 100.0 3.7E-33 8.1E-38 304.3 17.2 254 625-894 1-276 (280)
363 cd07866 STKc_BUR1 Catalytic do 100.0 1E-32 2.2E-37 305.8 21.0 267 624-895 7-308 (311)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.3E-32 2.9E-37 309.1 21.3 257 622-895 12-298 (343)
365 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-32 2.3E-37 309.3 19.7 258 625-895 5-291 (337)
366 cd07834 STKc_MAPK Catalytic do 100.0 1E-32 2.2E-37 308.8 19.3 260 626-895 1-289 (330)
367 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-32 2.8E-37 307.0 20.0 259 620-895 5-288 (328)
368 cd07854 STKc_MAPK4_6 Catalytic 100.0 9.6E-33 2.1E-37 310.2 18.8 260 625-895 5-300 (342)
369 cd08222 STKc_Nek11 Catalytic d 100.0 1.8E-32 4E-37 295.6 20.2 249 626-895 1-257 (260)
370 KOG0666 Cyclin C-dependent kin 100.0 2E-33 4.2E-38 283.3 10.1 205 623-835 22-242 (438)
371 cd07857 STKc_MPK1 Catalytic do 100.0 4.2E-32 9.2E-37 303.8 22.0 261 626-895 1-292 (332)
372 cd07829 STKc_CDK_like Catalyti 100.0 3.9E-32 8.4E-37 296.6 20.5 257 627-895 1-279 (282)
373 cd07851 STKc_p38 Catalytic dom 100.0 2.4E-32 5.2E-37 307.1 18.5 256 623-895 13-298 (343)
374 cd05123 STKc_AGC Catalytic dom 100.0 4.5E-32 9.7E-37 290.6 18.8 236 633-891 1-240 (250)
375 KOG4236 Serine/threonine prote 100.0 4.3E-33 9.3E-38 297.3 10.6 245 630-895 569-819 (888)
376 cd05610 STKc_MASTL Catalytic d 100.0 1.5E-31 3.2E-36 323.7 23.7 146 625-775 4-153 (669)
377 KOG0587 Traf2- and Nck-interac 100.0 4.2E-32 9E-37 308.2 16.7 260 615-895 9-282 (953)
378 KOG0612 Rho-associated, coiled 100.0 1.7E-32 3.8E-37 317.9 12.7 259 616-895 66-338 (1317)
379 KOG0662 Cyclin-dependent kinas 100.0 6.1E-32 1.3E-36 251.9 13.3 257 627-895 4-283 (292)
380 KOG0696 Serine/threonine prote 100.0 1.2E-32 2.6E-37 286.3 8.8 241 624-887 348-593 (683)
381 cd05576 STKc_RPK118_like Catal 100.0 1.3E-31 2.8E-36 284.8 16.9 220 636-890 4-224 (237)
382 KOG1151 Tousled-like protein k 100.0 3.2E-32 6.9E-37 285.2 10.8 260 624-893 462-739 (775)
383 KOG0604 MAP kinase-activated p 100.0 5.7E-32 1.2E-36 271.8 11.0 250 623-895 59-322 (400)
384 PLN03224 probable serine/threo 100.0 1.3E-30 2.9E-35 299.2 20.6 264 623-895 143-500 (507)
385 KOG1027 Serine/threonine prote 100.0 8.6E-32 1.9E-36 304.3 9.9 248 626-895 510-767 (903)
386 smart00220 S_TKc Serine/Threon 100.0 4.2E-30 9.1E-35 273.1 21.5 238 637-894 1-240 (244)
387 KOG0695 Serine/threonine prote 100.0 1.7E-31 3.7E-36 270.9 10.0 248 623-887 248-502 (593)
388 KOG0614 cGMP-dependent protein 100.0 4.6E-32 9.9E-37 289.1 6.0 247 627-895 422-677 (732)
389 KOG0603 Ribosomal protein S6 k 100.0 6.2E-31 1.3E-35 291.8 14.6 240 624-895 321-563 (612)
390 PLN03225 Serine/threonine-prot 100.0 3E-30 6.6E-35 304.4 21.1 258 623-895 130-450 (566)
391 KOG0669 Cyclin T-dependent kin 100.0 5.3E-32 1.1E-36 265.4 5.0 256 630-895 22-315 (376)
392 KOG0671 LAMMER dual specificit 100.0 4.7E-31 1E-35 274.8 11.0 265 615-895 79-406 (415)
393 KOG0984 Mitogen-activated prot 100.0 2.3E-30 5E-35 247.2 10.5 209 627-846 48-265 (282)
394 KOG4194 Membrane glycoprotein 100.0 2.6E-31 5.6E-36 287.8 3.0 315 85-406 124-470 (873)
395 KOG0608 Warts/lats-like serine 100.0 3.6E-29 7.8E-34 272.7 14.3 213 621-838 625-876 (1034)
396 KOG0664 Nemo-like MAPK-related 100.0 1.1E-29 2.5E-34 251.3 3.5 257 627-896 55-344 (449)
397 KOG0668 Casein kinase II, alph 100.0 1.9E-28 4.1E-33 237.3 9.4 253 624-895 37-322 (338)
398 cd00180 PKc Catalytic domain o 99.9 7E-27 1.5E-31 242.2 21.5 210 633-895 1-214 (215)
399 KOG0576 Mitogen-activated prot 99.9 6.3E-29 1.4E-33 273.9 5.8 254 623-894 13-270 (829)
400 KOG0665 Jun-N-terminal kinase 99.9 6.8E-28 1.5E-32 245.5 9.9 254 625-895 17-310 (369)
401 KOG1152 Signal transduction se 99.9 7.1E-28 1.5E-32 261.3 10.0 198 623-834 559-770 (772)
402 smart00221 STYKc Protein kinas 99.9 5.3E-26 1.2E-30 238.9 21.4 199 627-835 1-202 (225)
403 KOG1345 Serine/threonine kinas 99.9 3.4E-27 7.4E-32 234.3 10.5 246 625-894 24-283 (378)
404 KOG0444 Cytoskeletal regulator 99.9 3.9E-29 8.5E-34 271.7 -6.0 295 86-391 7-307 (1255)
405 KOG0444 Cytoskeletal regulator 99.9 8.5E-29 1.8E-33 269.2 -3.6 296 88-387 57-374 (1255)
406 KOG1290 Serine/threonine prote 99.9 1.2E-25 2.7E-30 240.2 17.6 132 625-760 78-222 (590)
407 KOG0195 Integrin-linked kinase 99.9 2.6E-26 5.7E-31 227.5 9.7 256 613-900 185-447 (448)
408 KOG0670 U4/U6-associated splic 99.9 4.8E-26 1E-30 244.0 8.0 259 623-895 430-746 (752)
409 KOG1167 Serine/threonine prote 99.9 2E-25 4.3E-30 236.4 12.5 266 620-895 31-381 (418)
410 KOG1164 Casein kinase (serine/ 99.9 5.1E-24 1.1E-28 236.3 21.3 268 626-903 19-301 (322)
411 PLN00181 protein SPA1-RELATED; 99.9 2.9E-25 6.2E-30 275.9 9.4 202 677-895 28-265 (793)
412 smart00750 KIND kinase non-cat 99.9 5.5E-24 1.2E-28 215.0 15.2 169 706-901 1-171 (176)
413 KOG0472 Leucine-rich repeat pr 99.9 4.8E-27 1E-31 244.8 -7.8 265 111-389 46-311 (565)
414 KOG4237 Extracellular matrix p 99.9 3E-26 6.5E-31 239.0 -2.7 298 137-447 71-389 (498)
415 KOG1163 Casein kinase (serine/ 99.9 4.8E-24 1E-28 208.6 12.8 266 625-904 15-289 (341)
416 KOG0472 Leucine-rich repeat pr 99.9 2.9E-26 6.2E-31 239.1 -3.3 193 90-290 118-310 (565)
417 KOG1165 Casein kinase (serine/ 99.9 2.9E-23 6.3E-28 212.2 16.1 265 626-905 29-305 (449)
418 PRK09188 serine/threonine prot 99.9 2.3E-23 5.1E-28 229.6 15.5 173 621-808 14-195 (365)
419 PRK15387 E3 ubiquitin-protein 99.9 1.3E-21 2.7E-26 232.5 17.4 256 88-389 203-459 (788)
420 COG0515 SPS1 Serine/threonine 99.9 3.2E-20 6.8E-25 206.5 24.5 258 627-895 2-275 (384)
421 KOG0618 Serine/threonine phosp 99.9 1.3E-23 2.9E-28 240.3 -3.0 197 206-415 242-488 (1081)
422 PRK15370 E3 ubiquitin-protein 99.9 9E-21 1.9E-25 226.9 20.6 246 110-388 178-428 (754)
423 KOG1240 Protein kinase contain 99.8 1.4E-21 3E-26 227.0 7.5 253 626-895 24-291 (1431)
424 KOG0590 Checkpoint kinase and 99.8 9.5E-22 2.1E-26 231.2 4.8 255 629-894 322-584 (601)
425 cd05147 RIO1_euk RIO kinase fa 99.8 1.8E-20 3.8E-25 190.5 11.5 138 630-775 2-166 (190)
426 PRK10359 lipopolysaccharide co 99.8 1.5E-20 3.3E-25 192.6 10.3 174 621-828 27-217 (232)
427 PRK15387 E3 ubiquitin-protein 99.8 1.4E-19 3E-24 215.1 16.5 260 110-418 201-460 (788)
428 PRK12274 serine/threonine prot 99.8 1.5E-19 3.3E-24 180.8 13.3 190 628-834 5-208 (218)
429 cd05145 RIO1_like RIO kinase f 99.8 2.7E-19 5.9E-24 182.6 15.0 138 630-776 2-167 (190)
430 PF14531 Kinase-like: Kinase-l 99.8 1.4E-18 3E-23 183.5 18.0 229 629-886 16-288 (288)
431 PRK15370 E3 ubiquitin-protein 99.8 2E-19 4.4E-24 215.4 13.0 260 87-380 179-438 (754)
432 PLN03210 Resistant to P. syrin 99.8 2.4E-18 5.1E-23 220.6 23.0 286 87-389 559-884 (1153)
433 KOG0618 Serine/threonine phosp 99.8 1.2E-20 2.7E-25 216.2 -1.4 241 133-387 241-488 (1081)
434 PLN03210 Resistant to P. syrin 99.8 4.3E-18 9.2E-23 218.2 21.4 287 86-389 532-860 (1153)
435 PRK10345 hypothetical protein; 99.8 2.1E-18 4.7E-23 176.6 14.4 136 628-773 5-156 (210)
436 KOG1023 Natriuretic peptide re 99.8 9.4E-19 2E-23 196.1 10.8 216 675-901 1-226 (484)
437 KOG0603 Ribosomal protein S6 k 99.8 1.6E-19 3.4E-24 201.4 3.6 224 633-889 2-232 (612)
438 KOG0617 Ras suppressor protein 99.8 9E-21 1.9E-25 176.4 -5.8 165 155-347 31-195 (264)
439 KOG4158 BRPK/PTEN-induced prot 99.7 1.2E-17 2.5E-22 174.9 12.4 201 679-896 274-511 (598)
440 KOG1166 Mitotic checkpoint ser 99.7 1.3E-17 2.8E-22 199.3 14.4 254 618-901 691-955 (974)
441 cd00116 LRR_RI Leucine-rich re 99.7 1.6E-19 3.4E-24 201.0 -2.9 200 91-290 3-234 (319)
442 KOG0617 Ras suppressor protein 99.7 2.7E-19 5.9E-24 166.6 -3.1 154 132-290 32-186 (264)
443 PRK14879 serine/threonine prot 99.7 6.2E-17 1.3E-21 168.6 14.0 134 631-775 2-143 (211)
444 KOG4237 Extracellular matrix p 99.7 3.7E-19 8E-24 186.3 -3.4 341 91-447 51-410 (498)
445 TIGR03724 arch_bud32 Kae1-asso 99.7 7.5E-17 1.6E-21 166.3 12.5 130 632-775 1-138 (199)
446 cd00116 LRR_RI Leucine-rich re 99.7 1E-18 2.2E-23 194.6 -1.7 263 124-387 14-319 (319)
447 cd05144 RIO2_C RIO kinase fami 99.7 1.2E-16 2.6E-21 164.5 13.6 143 619-776 9-175 (198)
448 smart00090 RIO RIO-like kinase 99.7 8.5E-17 1.8E-21 169.2 12.6 141 626-775 29-197 (237)
449 PRK09605 bifunctional UGMP fam 99.7 7.6E-17 1.6E-21 191.2 12.4 145 617-776 325-477 (535)
450 KOG1033 eIF-2alpha kinase PEK/ 99.7 2.2E-17 4.8E-22 181.0 6.2 177 694-892 329-509 (516)
451 KOG0606 Microtubule-associated 99.7 9.7E-17 2.1E-21 187.3 7.0 215 623-887 81-304 (1205)
452 cd05120 APH_ChoK_like Aminogly 99.6 1.8E-15 3.9E-20 148.2 10.2 135 629-775 2-138 (155)
453 cd05119 RIO RIO kinase family, 99.6 6.2E-15 1.3E-19 150.4 11.9 135 630-776 2-164 (187)
454 PRK01723 3-deoxy-D-manno-octul 99.6 1.5E-14 3.2E-19 152.6 14.5 135 630-775 36-191 (239)
455 PLN03150 hypothetical protein; 99.6 8.7E-15 1.9E-19 175.3 14.1 159 33-218 366-528 (623)
456 TIGR01982 UbiB 2-polyprenylphe 99.5 3.1E-13 6.6E-18 154.9 13.3 140 630-776 122-307 (437)
457 KOG0590 Checkpoint kinase and 99.4 1.2E-14 2.6E-19 171.4 -0.7 254 625-894 20-285 (601)
458 KOG0532 Leucine-rich repeat (L 99.4 2.4E-14 5.2E-19 156.9 -2.2 184 156-348 74-257 (722)
459 COG4886 Leucine-rich repeat (L 99.3 1.2E-12 2.5E-17 150.3 8.3 200 137-344 97-297 (394)
460 COG4886 Leucine-rich repeat (L 99.3 1.5E-12 3.4E-17 149.2 8.6 187 127-320 110-297 (394)
461 KOG3207 Beta-tubulin folding c 99.3 2.6E-13 5.7E-18 144.9 -0.3 234 154-412 118-361 (505)
462 KOG1266 Protein kinase [Signal 99.3 1.9E-12 4.2E-17 133.3 5.5 206 672-895 118-331 (458)
463 KOG0532 Leucine-rich repeat (L 99.3 1.5E-13 3.3E-18 150.8 -3.4 169 114-290 79-247 (722)
464 cd05151 ChoK Choline Kinase (C 99.3 8.7E-12 1.9E-16 124.9 9.4 130 630-774 3-135 (170)
465 KOG0601 Cyclin-dependent kinas 99.3 4.4E-12 9.4E-17 142.7 7.4 251 626-894 115-378 (524)
466 PRK04750 ubiB putative ubiquin 99.3 2.6E-11 5.6E-16 140.4 13.0 142 625-777 120-315 (537)
467 KOG3207 Beta-tubulin folding c 99.2 2.1E-12 4.5E-17 138.1 1.6 208 108-337 119-339 (505)
468 KOG1259 Nischarin, modulator o 99.2 1.5E-12 3.2E-17 132.2 -0.0 125 255-388 285-412 (490)
469 KOG1243 Protein kinase [Genera 99.2 1.5E-10 3.3E-15 131.2 15.5 165 647-829 35-199 (690)
470 KOG1909 Ran GTPase-activating 99.2 2.1E-12 4.6E-17 134.7 0.2 242 128-388 25-311 (382)
471 cd05146 RIO3_euk RIO kinase fa 99.2 1.7E-10 3.8E-15 116.0 13.3 134 631-775 3-173 (197)
472 KOG0531 Protein phosphatase 1, 99.2 1.5E-12 3.2E-17 149.6 -2.3 197 130-337 69-268 (414)
473 KOG1259 Nischarin, modulator o 99.1 6.6E-12 1.4E-16 127.5 0.3 133 201-338 280-413 (490)
474 KOG3087 Serine/threonine prote 99.1 6.3E-10 1.4E-14 106.7 13.0 143 629-775 11-165 (229)
475 KOG1909 Ran GTPase-activating 99.1 2.1E-12 4.6E-17 134.7 -4.9 240 87-337 31-311 (382)
476 cd05154 ACAD10_11_like Acyl-Co 99.1 3.7E-10 8E-15 118.4 11.8 142 631-775 4-206 (223)
477 KOG0601 Cyclin-dependent kinas 99.1 4.8E-11 1E-15 134.4 4.8 247 622-897 262-516 (524)
478 PF14580 LRR_9: Leucine-rich r 99.1 1.7E-11 3.7E-16 120.8 0.8 57 134-194 20-77 (175)
479 PF14580 LRR_9: Leucine-rich r 99.1 3.7E-11 7.9E-16 118.5 2.9 131 254-415 19-150 (175)
480 KOG0531 Protein phosphatase 1, 99.1 1.2E-11 2.6E-16 142.1 -1.0 218 108-337 70-290 (414)
481 COG3642 Mn2+-dependent serine/ 99.1 9.7E-10 2.1E-14 106.3 11.8 131 631-775 2-140 (204)
482 PLN03150 hypothetical protein; 99.0 2.4E-10 5.1E-15 137.3 7.0 108 158-266 419-527 (623)
483 KOG4658 Apoptotic ATPase [Sign 99.0 3.4E-10 7.5E-15 138.6 5.3 247 87-338 546-808 (889)
484 PRK15123 lipopolysaccharide co 99.0 1.5E-08 3.2E-13 108.1 16.2 140 631-774 28-193 (268)
485 KOG3741 Poly(A) ribonuclease s 98.9 3.5E-08 7.7E-13 108.6 17.7 214 638-895 289-521 (655)
486 KOG0606 Microtubule-associated 98.9 2.3E-10 5.1E-15 134.8 0.6 253 623-890 802-1084(1205)
487 KOG2982 Uncharacterized conser 98.9 9.1E-11 2E-15 119.5 -3.2 224 179-428 69-302 (418)
488 PF01163 RIO1: RIO1 family; I 98.8 1.1E-08 2.4E-13 102.7 10.0 124 640-775 1-155 (188)
489 KOG1859 Leucine-rich repeat pr 98.8 6.8E-11 1.5E-15 133.2 -8.0 131 230-392 165-296 (1096)
490 COG4248 Uncharacterized protei 98.8 2.5E-07 5.5E-12 99.3 17.3 261 628-904 14-305 (637)
491 COG0478 RIO-like serine/threon 98.8 3.2E-08 7E-13 101.5 9.7 135 626-774 92-250 (304)
492 KOG4658 Apoptotic ATPase [Sign 98.6 4.5E-08 9.7E-13 120.2 8.2 176 111-290 546-730 (889)
493 PRK09902 hypothetical protein; 98.6 5.5E-07 1.2E-11 90.8 14.4 137 633-774 26-178 (216)
494 KOG1859 Leucine-rich repeat pr 98.6 5.2E-10 1.1E-14 126.3 -8.8 155 126-290 102-267 (1096)
495 KOG2982 Uncharacterized conser 98.6 1.5E-08 3.2E-13 103.7 1.7 229 103-331 38-286 (418)
496 PF13855 LRR_8: Leucine rich r 98.6 2.3E-08 5E-13 81.1 2.4 58 183-240 3-60 (61)
497 PF06293 Kdo: Lipopolysacchari 98.6 5.3E-07 1.1E-11 93.1 12.2 106 665-775 55-170 (206)
498 COG0661 AarF Predicted unusual 98.5 5.1E-07 1.1E-11 104.2 10.5 140 631-777 131-316 (517)
499 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 1.9E-06 4.1E-11 90.2 13.5 139 631-775 7-182 (226)
500 KOG2137 Protein kinase [Signal 98.4 9.8E-08 2.1E-12 109.3 2.1 159 728-894 104-264 (700)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.9e-77 Score=763.04 Aligned_cols=820 Identities=25% Similarity=0.384 Sum_probs=436.6
Q ss_pred CCCCHhHHHHHHHHHHHcccCccccCCCCCCCCCCCCCCceeeCccccCCCceeeEEEEccCCcCCCCccccccCCCCcc
Q 002158 34 QTTDPQEASALRAIKNSLVDSMNHLRNWNKGDPCMSNWTGVLCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQ 113 (958)
Q Consensus 34 ~~~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~ 113 (958)
+..+++|+.||++||+++.+|...+.+|+..++|| .|.||+|.+ ..+|+.|+|+++++++.+++.+..+++|+
T Consensus 24 ~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c-~w~gv~c~~------~~~v~~L~L~~~~i~~~~~~~~~~l~~L~ 96 (968)
T PLN00113 24 SMLHAEELELLLSFKSSINDPLKYLSNWNSSADVC-LWQGITCNN------SSRVVSIDLSGKNISGKISSAIFRLPYIQ 96 (968)
T ss_pred cCCCHHHHHHHHHHHHhCCCCcccCCCCCCCCCCC-cCcceecCC------CCcEEEEEecCCCccccCChHHhCCCCCC
Confidence 33478999999999999988888899998777765 899999963 23788999999888888888888888888
Q ss_pred eeeccCc-ccCCCCcccc-CCCCCcEEEeeCCCCCCC----------------------CChhhcCCCCCCEEecccccc
Q 002158 114 YYFMWND-LTGTIPKEIG-NISSLIFLLLNGNKLSGS----------------------LPDELGYLSNLNRLQVDENNI 169 (958)
Q Consensus 114 ~L~l~n~-~~~~ip~~i~-~l~~L~~L~Ls~n~l~~~----------------------~p~~l~~l~~L~~L~L~~N~l 169 (958)
.|++++| +.+.+|..+. ++++|++|+|++|++++. +|..++++++|++|+|++|.+
T Consensus 97 ~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l 176 (968)
T PLN00113 97 TINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL 176 (968)
T ss_pred EEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcc
Confidence 8888744 4567777654 666666666666666544 444455555555555555555
Q ss_pred cccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCcccc
Q 002158 170 TGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPAT 249 (958)
Q Consensus 170 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~ 249 (958)
.+.+|..+.++++|++|+|++|.+++.+|..+.++++|+.|+|++|++++.+|..+.++++|++|+|++|+++ ..+|..
T Consensus 177 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~p~~ 255 (968)
T PLN00113 177 VGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLT-GPIPSS 255 (968)
T ss_pred cccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceec-cccChh
Confidence 5555555555555555555555555555555555555555555555555555555555555555555555554 244555
Q ss_pred ccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCC
Q 002158 250 YGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQ 327 (958)
Q Consensus 250 ~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 327 (958)
++++++|+.|+|++|++++..+ .+.++++|+.|+|++|.+.+.+|.. ..+++|+.|+|++|.+++..|..+..+++|+
T Consensus 256 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 335 (968)
T PLN00113 256 LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQ 335 (968)
T ss_pred HhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCC
Confidence 5555555555555555554443 2455555555555555555444432 2345555555555555555555555555555
Q ss_pred eEeeecccCCCccchhhhcccccCccccceEeccCCCCCCC-cc------------------------CC-CCCCcceEE
Q 002158 328 TLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNI-VG------------------------DL-TLPNNVTLR 381 (958)
Q Consensus 328 ~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l-~~------------------------~~-~l~~L~~L~ 381 (958)
.|+|++|.+++.+|..+..+. .|+.|+|++|+++.. +. .. .+++|+.|+
T Consensus 336 ~L~L~~n~l~~~~p~~l~~~~-----~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~ 410 (968)
T PLN00113 336 VLQLWSNKFSGEIPKNLGKHN-----NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVR 410 (968)
T ss_pred EEECcCCCCcCcCChHHhCCC-----CCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEE
Confidence 555555555555555444332 233444444444321 11 11 333444444
Q ss_pred eCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCC----CCCCCcccccCCCCCCceeeeec-----eee-eeec
Q 002158 382 LGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQA----CPVDNFFEYVPASPEPCFCAAPL-----RIG-YRLK 451 (958)
Q Consensus 382 l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~----~~~~~~~~~~~~~~~~~~c~sp~-----~~~-~~~~ 451 (958)
+.+|++.... + ..+........+.+.+|.+.-..+. .+-..++.- +.+.....-|. ... ..+.
T Consensus 411 L~~n~l~~~~--p--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L---~~n~~~~~~p~~~~~~~L~~L~ls 483 (968)
T PLN00113 411 LQDNSFSGEL--P--SEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL---ARNKFFGGLPDSFGSKRLENLDLS 483 (968)
T ss_pred CcCCEeeeEC--C--hhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEEC---cCceeeeecCcccccccceEEECc
Confidence 4444432110 0 0011111222233333322110000 000000000 00000000000 000 0000
Q ss_pred CCCCCCCCCChh------------------hhHHHHhhhcccceeeeEEeeeeecc------CCCcceEEEeeeccCCCC
Q 002158 452 SPSFTYFPPYVY------------------PFEEYLTNTLNLELYQLSIDSFAWEK------GPRLEMYLKLFPTLNRSS 507 (958)
Q Consensus 452 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 507 (958)
.-.++...|... .......+-..++...++-+.+.... -+.+.. +.+ ..|.-.
T Consensus 484 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~-L~L--s~N~l~ 560 (968)
T PLN00113 484 RNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQ-LDL--SQNQLS 560 (968)
T ss_pred CCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCE-EEC--CCCccc
Confidence 000000000000 00000000011111111111111000 000000 000 001000
Q ss_pred -ccchhHHHHhhhhccccccCCCcccCCcccc----ce---eecC-------CCCCCCCCCCCCCcccceeeeehhHHHH
Q 002158 508 -TFDDSEVRQIRDRFTSWKFPGSDIFGPYELL----NF---TLLG-------PYSNLNFNSQSKGISGGILAAIVVGAVA 572 (958)
Q Consensus 508 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~ivv~~~~ 572 (958)
..... ... -.....-.+.++...|.+... .+ .+.| +................ +..+++++++
T Consensus 561 ~~~p~~-l~~-l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~-~~~~~~~~~~ 637 (968)
T PLN00113 561 GEIPKN-LGN-VESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPS-WWFYITCTLG 637 (968)
T ss_pred ccCChh-Hhc-CcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccce-eeeehhHHHH
Confidence 00000 000 000000011111111110000 00 0000 00000000000001111 1112222222
Q ss_pred HHHHH-HHHHHHHHHhhhhhccccccccccccccccc---cCCccccChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-
Q 002158 573 SAVAI-TAAVTLLVMRRHARYQHSLSRKRLSTKISMK---IDGVKGFKFKELAMATAYFSSSTQVGQGGYGKVYKGILS- 647 (958)
Q Consensus 573 ~~~~i-~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~- 647 (958)
+++++ +++++++++||+++.+.. ..+......... ......+.++++ ...|...+.||+|+||+||+|++.
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~ 713 (968)
T PLN00113 638 AFLVLALVAFGFVFIRGRNNLELK-RVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIK 713 (968)
T ss_pred HHHHHHHHHHHHHHHHhhhccccc-ccccccccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECC
Confidence 22222 222222222222211110 000000000000 000112333333 346778899999999999999974
Q ss_pred CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHH
Q 002158 648 DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLR 727 (958)
Q Consensus 648 ~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~ 727 (958)
++..||||++...... ..+|++.+++++|||||+++|+|.+++..++||||+++|+|.++++. ++|.++.+
T Consensus 714 ~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~ 784 (968)
T PLN00113 714 NGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRK 784 (968)
T ss_pred CCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHH
Confidence 7899999998754322 23568899999999999999999999999999999999999999952 88999999
Q ss_pred HHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc
Q 002158 728 VALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT 807 (958)
Q Consensus 728 i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 807 (958)
++.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||.+..... .....||++|+|||++.+
T Consensus 785 i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~ 852 (968)
T PLN00113 785 IAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----------DTKCFISSAYVAPETRET 852 (968)
T ss_pred HHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----------CCCccccccccCcccccC
Confidence 99999999999997766669999999999999999988875 665543211 112358899999999999
Q ss_pred CCCCCcchhhhHHHHHHHHHhCCCCCCCC----chhHHHHHHHhhcCcchhhhcccC---CCCChHHHHHHHHHHHHccc
Q 002158 808 HKLTDKSDVYSLGVVLLELLTGMQPISHG----KNIVREVNVARDSGMVFSIIDNRM---GSYPSECVERFVTLALRCCH 880 (958)
Q Consensus 808 ~~~~~~~DV~S~Gv~l~elltG~~P~~~~----~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~l~~li~~cl~ 880 (958)
..++.++|||||||++|||+||+.||+.. .....+.+...........+++.. ...+.....++.+++.+||+
T Consensus 853 ~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~ 932 (968)
T PLN00113 853 KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTA 932 (968)
T ss_pred CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999998532 223334333222222222333332 12345667788999999999
Q ss_pred cCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 881 DKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 881 ~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
.||++||+|+|+++.|+++.+..+
T Consensus 933 ~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 933 TDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred CCchhCcCHHHHHHHHHHhhcccc
Confidence 999999999999999998875443
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-51 Score=454.38 Aligned_cols=285 Identities=52% Similarity=0.876 Sum_probs=247.8
Q ss_pred CccccChHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEE
Q 002158 611 GVKGFKFKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYC 690 (958)
Q Consensus 611 ~~~~~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 690 (958)
..+.|+++|+..+|++|...+.||+|+||.||+|..++|+.||||++........++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 46779999999999999999999999999999999999999999988775443145699999999999999999999999
Q ss_pred EeCC-eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEee
Q 002158 691 DEEG-EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 691 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
.+.+ +.+||||||++|+|.++|+......++|.+|++||.++|+||+|||+...++||||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9998 599999999999999999876543799999999999999999999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCC-----chhHHHHH
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHG-----KNIVREVN 844 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~-----~~~~~~~~ 844 (958)
||+|+..+.. . .+......||.+|+|||++..+..+.|+|||||||+|+||+||+.+.+.. ..+..|..
T Consensus 221 FGLa~~~~~~-~-----~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 221 FGLAKLGPEG-D-----TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred ccCcccCCcc-c-----cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 9999754321 0 11111117999999999999999999999999999999999999888642 24667766
Q ss_pred HHhhcCcchhhhcccCC--CCCh-HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 845 VARDSGMVFSIIDNRMG--SYPS-ECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~--~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
.....+...+++|+.+. .++. .....+..++.+|++.+|++||+|.||++.|+.+..
T Consensus 295 ~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 295 PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 67777788899999874 4554 678889999999999999999999999999966543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1e-46 Score=414.60 Aligned_cols=258 Identities=36% Similarity=0.605 Sum_probs=218.4
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCChhc--HHHHHHHHHHHHccCCCCcceEEEEEEeCC-eEEEEEEecCCCC
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQG--QNEFLTEIKLLSRLHHRNLVSLLGYCDEEG-EQMLVYEFVPNGT 707 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lV~E~~~~gs 707 (958)
+.||+|+||+||+|.|+....||||++....... .++|.+|+.+|++++|||||+++|+|.... ..++|||||++|+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs 126 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS 126 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence 4599999999999999766669999998753222 568999999999999999999999999887 7999999999999
Q ss_pred HHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-CeEEeeeeeecccccCCCCCCcc
Q 002158 708 LRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-NAKVADFGLSRLAPVLDDEGTMP 786 (958)
Q Consensus 708 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~~~~~~~~~~~ 786 (958)
|.++++......+++..+++++.|||+||.|||+++. ||||||||+|||++.++ ++||+|||+++......
T Consensus 127 L~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~------ 198 (362)
T KOG0192|consen 127 LSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK------ 198 (362)
T ss_pred HHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc------
Confidence 9999987545669999999999999999999999874 99999999999999997 99999999998653211
Q ss_pred ceeeeeccCCCCccChhhhc--cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 787 THVSTIVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 787 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
...+...||++|||||++. ...|+.|+||||||+++|||+||+.||.+.... +...... .....+.+|
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~v~--------~~~~Rp~~p 268 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASAVV--------VGGLRPPIP 268 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHHH--------hcCCCCCCC
Confidence 1223367999999999999 568999999999999999999999999876652 2221111 123345567
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
..++..+..++.+||+.||.+||++.+++..|+.+.......
T Consensus 269 ~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~ 310 (362)
T KOG0192|consen 269 KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA 310 (362)
T ss_pred ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence 779999999999999999999999999999999998766543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7e-46 Score=386.28 Aligned_cols=243 Identities=28% Similarity=0.434 Sum_probs=211.2
Q ss_pred CceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC-eEEEEEEecCCC
Q 002158 630 STQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG-EQMLVYEFVPNG 706 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lV~E~~~~g 706 (958)
.+.||+|..|+|||+.++ +++.+|+|++... ....++++.+|++++++.+||+||++||.|...+ ...++||||++|
T Consensus 84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgG 163 (364)
T KOG0581|consen 84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGG 163 (364)
T ss_pred hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCC
Confidence 567999999999999987 6889999999554 4555678999999999999999999999999998 599999999999
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
+|++++... +.+++...-+++.++++||.|||+ ++ ||||||||+|||++..|++||+|||.++.+..
T Consensus 164 SLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn------- 231 (364)
T KOG0581|consen 164 SLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVN------- 231 (364)
T ss_pred CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhh-------
Confidence 999999765 349999999999999999999996 66 99999999999999999999999999986532
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCC----chhHHHHHHHhhcCcchhhhcccCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHG----KNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.....+.||..|||||.+.+..|+.++||||||++++|+.+|+.||... ....+. +..++++..+
T Consensus 232 --S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L---------l~~Iv~~ppP 300 (364)
T KOG0581|consen 232 --SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL---------LCAIVDEPPP 300 (364)
T ss_pred --hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH---------HHHHhcCCCC
Confidence 2445688999999999999999999999999999999999999999753 111111 1233444555
Q ss_pred CCChH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSE-CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..|.+ +++++..++..|+++||.+||+++|+++|
T Consensus 301 ~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 301 RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 66775 89999999999999999999999999986
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-45 Score=398.13 Aligned_cols=252 Identities=35% Similarity=0.576 Sum_probs=213.8
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHH
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLR 709 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 709 (958)
.+.||+|-||+||.|.|+....||||.++.... ..+.|.+|+++|++++|+|||+++|+|..++..+||||||+.|+|.
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl 289 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL 289 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence 457999999999999998888999999987633 3457999999999999999999999999998999999999999999
Q ss_pred HHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcccee
Q 002158 710 DWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHV 789 (958)
Q Consensus 710 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 789 (958)
++|+...+..+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+|||+||... ++. ...
T Consensus 290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~--d~~----Y~~ 360 (468)
T KOG0197|consen 290 DYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIG--DDE----YTA 360 (468)
T ss_pred HHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccC--CCc----eee
Confidence 9999866777999999999999999999999999 9999999999999999999999999999432 111 112
Q ss_pred eeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 790 STIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 790 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
.....-...|.|||.+....++.|||||||||+||||+| |+.||....+ .+.+.... . +.+-..|..||
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-~ev~~~le-~--------GyRlp~P~~CP 430 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-EEVLELLE-R--------GYRLPRPEGCP 430 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-HHHHHHHh-c--------cCcCCCCCCCC
Confidence 222334568999999999999999999999999999999 8999865443 22222221 1 22234578899
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
+++++||..||+.+|++|||++.+...|+++..
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 999999999999999999999999988888654
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-44 Score=377.28 Aligned_cols=249 Identities=28% Similarity=0.472 Sum_probs=204.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.+|...+.||+|+||+||+|+++ ++..||||.+... ..+.++....|+.+|+.++|||||++++++..++..|||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 35777778999999999999986 6899999998776 45566778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC------CCeEEeeeeeecc
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN------LNAKVADFGLSRL 775 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~------~~~kl~DFGla~~ 775 (958)
||.||+|.+|++.++. +++.++..++.|+|.||++||+++ ||||||||.|||++.. -.+||+|||+||.
T Consensus 90 yC~gGDLs~yi~~~~~--l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGR--LPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred eCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999987654 999999999999999999999999 9999999999999764 4689999999998
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
+.. .......+|++-|||||+++.++|+.|+|+||.|+++||+++|+.||.... ..+.....+.....
T Consensus 165 L~~--------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t-~~eL~~~~~k~~~~--- 232 (429)
T KOG0595|consen 165 LQP--------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET-PKELLLYIKKGNEI--- 232 (429)
T ss_pred CCc--------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC-HHHHHHHHhccccc---
Confidence 752 333456789999999999999999999999999999999999999997433 22322222222111
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
.+..+........+++...++.+|.+|-++.+-..
T Consensus 233 ----~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~ 267 (429)
T KOG0595|consen 233 ----VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFD 267 (429)
T ss_pred ----cCchhhhccCchhhhhhHHHhcCccccCchHHhhh
Confidence 12233344455557777777778888876666543
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-44 Score=394.12 Aligned_cols=248 Identities=25% Similarity=0.443 Sum_probs=216.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-CCCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-SDNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
..|...+.||+|||+.||+++. ..|+.||+|++.+. .....+...+|+++.+.++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688889999999999999998 78999999999764 3344567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|+|++++|.++++. ++.+++.++..+..||+.||.|||+++ |+|||||-.|++++++.++||+|||+|..+...+
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 99999999999973 345999999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
......+|||.|+|||++....++..+||||+||+||-|+.|++||+. +.+.+.+.... ..-
T Consensus 173 -------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet-k~vkety~~Ik----------~~~ 234 (592)
T KOG0575|consen 173 -------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET-KTVKETYNKIK----------LNE 234 (592)
T ss_pred -------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-chHHHHHHHHH----------hcC
Confidence 234567899999999999999999999999999999999999999973 33333333222 222
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+|.....+..+||.++++.||.+|||+++|+.+
T Consensus 235 Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 235 YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 34577788899999999999999999999999975
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.6e-44 Score=410.34 Aligned_cols=266 Identities=31% Similarity=0.506 Sum_probs=220.1
Q ss_pred HHHHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeC
Q 002158 621 AMATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEE 693 (958)
Q Consensus 621 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 693 (958)
+..+.+....+.||+|+||+||+|... +...||||.+++.... .+.+|.+|+++++.++|||||+++|+|..+
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~ 561 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG 561 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence 334455566778999999999999853 3567999999987655 678999999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCC------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRT------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS 761 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~ 761 (958)
+..++|+|||..|+|.++|.... +.+++..+.+.||.|||.||+||-++. +|||||..+|+||.+
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGE 638 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceecc
Confidence 99999999999999999996432 223889999999999999999999999 999999999999999
Q ss_pred CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhH
Q 002158 762 NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIV 840 (958)
Q Consensus 762 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~ 840 (958)
+..|||+|||++|.....+-.. ......=..+|||||.++.++|+++||||||||+|||+++ |+.||.+..+.
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk-----~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~- 712 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYK-----VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ- 712 (774)
T ss_pred ceEEEecccccchhhhhhhhhc-----ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH-
Confidence 9999999999998653322111 1101112468999999999999999999999999999999 99999865442
Q ss_pred HHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 841 REVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 841 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
++...... ...-..|.+||.++++||..||+.+|++||+++||-..|++..+.-+
T Consensus 713 -EVIe~i~~--------g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 713 -EVIECIRA--------GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred -HHHHHHHc--------CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 22222222 22345688999999999999999999999999999999999775444
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8e-44 Score=372.21 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=205.2
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc-------HHHHHHHHHHHHccCCCCcceEEEEEEeCC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG-------QNEFLTEIKLLSRLHHRNLVSLLGYCDEEG 694 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 694 (958)
..+.|...+.||+|+||.|-+|..+ +|+.||||++....... .....+|+++|++++|||||+++++++..+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4557788899999999999999965 79999999987642221 223579999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC---CCeEEeeee
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN---LNAKVADFG 771 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~---~~~kl~DFG 771 (958)
..|+||||++||.|.+.+-..+. +.+..-..++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~--l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY--LREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc--cccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence 99999999999999999965543 777778899999999999999999 9999999999999665 779999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhccCCC---CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKL---TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~ 848 (958)
+|+.... ......++||+.|.|||++.+..+ ..++|+||+||+||-+++|.+||.+.........
T Consensus 325 lAK~~g~--------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~e---- 392 (475)
T KOG0615|consen 325 LAKVSGE--------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKE---- 392 (475)
T ss_pred hhhcccc--------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHH----
Confidence 9997532 334456899999999999987653 3388999999999999999999975432211111
Q ss_pred cCcchhhhcccCC---CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 849 SGMVFSIIDNRMG---SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 849 ~~~~~~~i~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
++...+.. .......++..++|.+|+..||++||+++|++++
T Consensus 393 -----QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 393 -----QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred -----HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 11112221 2234678899999999999999999999999985
No 10
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=394.80 Aligned_cols=261 Identities=28% Similarity=0.450 Sum_probs=221.3
Q ss_pred CCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
..+.++||.|.||+||+|+++ ....||||.++.... +.+.+|+.|+.+|.++.||||++|.|+.......++|+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 456789999999999999986 346799999998754 445689999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
||+||+|+.+|+.+.++ +++.+...+..+||.|++||.+.+ +|||||.++|||++.+..+||+|||++|.+.....
T Consensus 711 yMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 99999999999877654 999999999999999999999999 99999999999999999999999999997744331
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
....+..-.-..+|.|||.+...+++.++|||||||+|||.++ |.+||-+..+-. +... +.+...
T Consensus 787 ----~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd--VIka--------Ie~gyR 852 (996)
T KOG0196|consen 787 ----AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VIKA--------IEQGYR 852 (996)
T ss_pred ----ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH--HHHH--------HHhccC
Confidence 1222222333568999999999999999999999999999999 999997654321 1111 112223
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
...|.+||..+.+||+.||++|-.+||.++||+..|.++++....
T Consensus 853 LPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~S 897 (996)
T KOG0196|consen 853 LPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNS 897 (996)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchh
Confidence 445889999999999999999999999999999999999875543
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-44 Score=353.89 Aligned_cols=256 Identities=26% Similarity=0.419 Sum_probs=207.6
Q ss_pred CCCCCceeeeeCCeEEEEEEE-CCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEE-EEEeCC-eEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGIL-SDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLG-YCDEEG-EQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~-~~~lV~ 700 (958)
+|.+.++||+|.||+|||+.. .+|..||.|.+.-+ +.........|+.+|++++|||||++++ .+..+. ..++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 455667899999999999995 48999999988644 3344567899999999999999999999 344444 489999
Q ss_pred EecCCCCHHHHhcc--CCCCCchHHHHHHHHHHHHHHHHHhhhcC-CCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 701 EFVPNGTLRDWLSG--RTKENLNFAMRLRVALDSAKGILYLHTEA-HPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 701 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
|||..|+|..+++. +.+..+++.++++++.|++.||.++|..- +..|+||||||.||+++.+|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 99999999999964 33456999999999999999999999842 1239999999999999999999999999999874
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.. .......+|||.||+||.+.+..|+.|+||||+||++|||+.-++||.+. ++........+
T Consensus 180 s~-------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~q--------- 242 (375)
T KOG0591|consen 180 SK-------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIEQ--------- 242 (375)
T ss_pred ch-------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHHc---------
Confidence 32 12234578999999999999999999999999999999999999999865 44333322222
Q ss_pred ccCCCCC-hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 858 NRMGSYP-SECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 858 ~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
...+..| .-.+..+..||..|+..||+.||+.-.+++.+..
T Consensus 243 gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 243 GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1122344 5678899999999999999999996665555544
No 12
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=378.92 Aligned_cols=272 Identities=25% Similarity=0.456 Sum_probs=219.5
Q ss_pred HHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe
Q 002158 618 KELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE 695 (958)
Q Consensus 618 ~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 695 (958)
++++..-+.+.....||+|.||+||+|.|.. .||||+++... ....+.|..|+.++++-+|.||+-+.|||..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 4444455556667899999999999999953 59999987653 4456789999999999999999999999998877
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.+|+.||+|.+|+.++|... ..++..+.+.||.|||+|+.|||.++ |||||||..||++.+++.|||+|||++..
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred -eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceee
Confidence 99999999999999999655 45999999999999999999999999 99999999999999999999999999976
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccC---CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
-....... ....-.|...|||||+++.+ +|+..+||||||+++|||+||..||. .....+.+ .....+..
T Consensus 538 k~~w~g~~-----q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIi-fmVGrG~l 610 (678)
T KOG0193|consen 538 KTRWSGEQ-----QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQII-FMVGRGYL 610 (678)
T ss_pred eeeecccc-----ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheE-EEeccccc
Confidence 54432211 11223478899999999754 58889999999999999999999997 33322221 11111111
Q ss_pred hhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCCC
Q 002158 853 FSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPETD 907 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 907 (958)
.+.+......+++++.+|+..||..++++||.+.+|+..|+.++...|.-.
T Consensus 611 ----~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~ 661 (678)
T KOG0193|consen 611 ----MPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKIN 661 (678)
T ss_pred ----CccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccc
Confidence 111223356789999999999999999999999999999999887666543
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-42 Score=357.31 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=208.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
.+.|+..+.||+|+||+||.++.+ .++.+|+|++++... .+.+...+|..+|.+++||.||+++-.|.+.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 457889999999999999999976 589999999977532 3456688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
+||+.||.|..+|++.+. +++..+.-++..|+.||.|||+.+ ||||||||+|||+|++|.++|+|||+++..-..
T Consensus 104 ld~~~GGeLf~hL~~eg~--F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR--FSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHHHhcCC--cchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 999999999999976544 999999999999999999999999 999999999999999999999999999854222
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
...+..++||+.|||||++.+..|+..+|.||+|+++|||++|.+||.... ......... ...
T Consensus 179 -------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-~~~~~~~I~---------~~k 241 (357)
T KOG0598|consen 179 -------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-VKKMYDKIL---------KGK 241 (357)
T ss_pred -------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-HHHHHHHHh---------cCc
Confidence 122345899999999999999999999999999999999999999997533 222222221 122
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCC----CHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRP----SMSDVVR 894 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~ 894 (958)
....|.-...+..+++.+.+..||++|. ++.+|-+
T Consensus 242 ~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 242 LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 2333444778899999999999999995 4555443
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-41 Score=361.64 Aligned_cols=256 Identities=23% Similarity=0.350 Sum_probs=214.9
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh---cHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ---GQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 698 (958)
..+|...+.||+|+|++||+|+.+ .++.||||++.+.... ..+-...|-++|.+| +||.|++|+-.|.++..+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 346667788999999999999975 6899999998764221 123356899999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
|+||+++|+|.++|+..+ .+++..+..++.+|+.||+|||++| ||||||||+|||+|+||++||+|||.|+.+..
T Consensus 152 vLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999997654 4999999999999999999999999 99999999999999999999999999998854
Q ss_pred CCCCCC------ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 779 LDDEGT------MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 779 ~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
...... ........++||..|++||++.....++.+|+|+|||++|+|+.|++||.+..+...
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli----------- 295 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI----------- 295 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH-----------
Confidence 433211 111112568999999999999999999999999999999999999999976543221
Q ss_pred hhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
++.|-.....+|...++.+.+|+.+.+..||.+|++.++|.++
T Consensus 296 FqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 296 FQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 2222233346677888999999999999999999999999876
No 15
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-42 Score=370.19 Aligned_cols=240 Identities=30% Similarity=0.512 Sum_probs=204.8
Q ss_pred CCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 629 SSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
+.+-||+|+-|.||+|++ .++.||||+++.-. ..+|+-|++++|+||+.|.|+|.....++||||||+.|-|
T Consensus 128 ELeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 356799999999999998 57789999986422 2578889999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccce
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTH 788 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 788 (958)
++.|+..+ .++....+.|..+||.|+.|||.+. |||||||.-||||..+..+||+|||.++..... .
T Consensus 200 ~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--------S 266 (904)
T KOG4721|consen 200 YEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK--------S 266 (904)
T ss_pred HHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh--------h
Confidence 99997654 4888899999999999999999999 999999999999999999999999999865321 2
Q ss_pred eeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC-CCCChHH
Q 002158 789 VSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM-GSYPSEC 867 (958)
Q Consensus 789 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~ 867 (958)
....++||..|||||+++..+.+.|+|||||||+||||+||..||.+-.... .++-+-.+.+ ...|..|
T Consensus 267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----------IIwGVGsNsL~LpvPstc 336 (904)
T KOG4721|consen 267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----------IIWGVGSNSLHLPVPSTC 336 (904)
T ss_pred hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----------eEEeccCCcccccCcccC
Confidence 2345889999999999999999999999999999999999999997533211 1111111222 3458899
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 868 VERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 868 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
|+.+.-|+++||+..|+.||++.+|+.+|.-.
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 99999999999999999999999999998653
No 16
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=360.41 Aligned_cols=256 Identities=28% Similarity=0.474 Sum_probs=208.4
Q ss_pred CCCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC--eEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG--EQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~E~ 702 (958)
++...+.||+|+||+||++...+ |+..|||.+........+.+.+|+.+|++++|||||+.+|...... .+++.|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 45567889999999999999864 8999999987653333566889999999999999999999855444 68999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~~~~~ 781 (958)
+++|+|.+++.+.+. .+++..+.++..||++||+|||+++ ||||||||+|||++. ++.+||+|||+++.......
T Consensus 98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 999999999987765 6999999999999999999999999 999999999999999 79999999999986542111
Q ss_pred CCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCC-chhHHHHHHHhhcCcchhhhccc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHG-KNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~-~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......+.||+.|||||++..+ ....++||||+||++.||+||+.||... ........... ...
T Consensus 174 ----~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~---------~~~ 240 (313)
T KOG0198|consen 174 ----KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGR---------EDS 240 (313)
T ss_pred ----cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhc---------cCC
Confidence 12223457799999999999964 3445999999999999999999999752 11111111111 112
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.+.+|...+.+..+++.+|+..||++|||+++++++...
T Consensus 241 ~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 241 LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 346677888999999999999999999999999987443
No 17
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=350.35 Aligned_cols=264 Identities=24% Similarity=0.336 Sum_probs=215.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-CCCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-SDNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+.|+..+.||.|..++||+|+. +.++.||||++.-+.-. +.+.+.+|+..|+.++||||++++..|..+..+|+||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 4677888999999999999995 47899999998765333 357889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
|.+|++.++++..-...+++..+..|..++++||.|||++| .||||||+.||||+.+|.|||+|||.+-.+...
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~--- 179 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS--- 179 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeeccc---
Confidence 99999999998776667999999999999999999999999 999999999999999999999999987654332
Q ss_pred CCccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
+.........+.||+.|||||+++. ..|+.|+||||||++..||.+|..||.........+........... .....
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-t~~~~ 258 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-TSGLD 258 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc-cccCC
Confidence 2222222266789999999999754 46899999999999999999999999876655444443332221111 00000
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+........+.+++..|++.||++|||+++++++
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 12233456689999999999999999999999864
No 18
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.6e-41 Score=338.49 Aligned_cols=258 Identities=26% Similarity=0.346 Sum_probs=205.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.|+...++|+|+||+|||++.+ +|+.||||++..... .-.+-.++|+++|++++|+|+|.++.+|......+||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 4556678999999999999987 599999999976432 2234578999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
|+. ++-+-|.... ..++.+.+.+++.|+++|+.|+|+++ +|||||||+||||+.+|.+||||||+|+.+...
T Consensus 83 ~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p--- 154 (396)
T KOG0593|consen 83 CDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP--- 154 (396)
T ss_pred cch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC---
Confidence 976 4444444332 33889999999999999999999999 999999999999999999999999999987432
Q ss_pred CCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch----hhh-
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF----SII- 856 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~----~~i- 856 (958)
....+..+.|..|.|||.+.+ .+|...+||||.||++.||++|.+-|.+..++.+.......-+... ++.
T Consensus 155 ----gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 155 ----GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred ----cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 223445678999999999988 6899999999999999999999999987777665544333322211 000
Q ss_pred ---------cccC---CCC---ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 ---------DNRM---GSY---PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ---------~~~~---~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
-+.. ... -+....-+.++++.|++.||++|++-+|++.+
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 0000 001 12344578899999999999999999999854
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-41 Score=365.32 Aligned_cols=250 Identities=25% Similarity=0.396 Sum_probs=214.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
..|....+||+|+.|.||.|... +++.||||++........+-..+|+.+|+..+|+|||++++.|...+..|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 45666778999999999999854 78899999998766555666889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
+||+|.|.+.... +++.++..|+.++++||+|||.++ |+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 353 ~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-- 424 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-- 424 (550)
T ss_pred CCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC--
Confidence 9999999997543 899999999999999999999999 99999999999999999999999999976543221
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.....+||+.|||||++....|.+|.||||||++++||+.|++||.....+............. -..
T Consensus 425 -----KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~--------lk~ 491 (550)
T KOG0578|consen 425 -----KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPK--------LKN 491 (550)
T ss_pred -----ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCC--------cCC
Confidence 2345679999999999999999999999999999999999999998766555444332221111 123
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+......+.+++.+||+.|+++||++.|++++
T Consensus 492 ~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 492 PEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 56778899999999999999999999999986
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.2e-40 Score=370.60 Aligned_cols=262 Identities=28% Similarity=0.466 Sum_probs=208.4
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC-
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE- 693 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~- 693 (958)
..++|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++++ +||||++++++|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4567888899999999999999741 35689999987543 23346789999999999 899999999998764
Q ss_pred CeEEEEEEecCCCCHHHHhccCC---------------------------------------------------------
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRT--------------------------------------------------------- 716 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~--------------------------------------------------------- 716 (958)
+..++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 46899999999999999997432
Q ss_pred ---CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeec
Q 002158 717 ---KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIV 793 (958)
Q Consensus 717 ---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~ 793 (958)
...+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....... .......
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~ 236 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGSA 236 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcc-----hhcccCC
Confidence 124788899999999999999999998 99999999999999999999999999985432111 0111223
Q ss_pred cCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHH
Q 002158 794 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFV 872 (958)
Q Consensus 794 ~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~ 872 (958)
.++..|+|||++.+..++.++|||||||++|||++ |..||............... ......+..++..+.
T Consensus 237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~ 307 (338)
T cd05102 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD---------GTRMRAPENATPEIY 307 (338)
T ss_pred CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc---------CCCCCCCCCCCHHHH
Confidence 46788999999999999999999999999999997 99999754322111111111 111122445667899
Q ss_pred HHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 873 TLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 873 ~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
+++.+||+.||++||++.|+++.|++++.
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998775
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-41 Score=356.51 Aligned_cols=259 Identities=23% Similarity=0.336 Sum_probs=211.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh-cHHHHHHHHHHHHccC-CCCcceEEEEEEeCC-eEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEG-EQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~lV 699 (958)
.++|...++||.|+||.||+|+.. .|..||||+++..-.. +.---++|+..|++++ |||||++.+++.+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 345667789999999999999965 6889999999875322 1223468999999998 999999999998887 99999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||| ..+|+++++++ ...+++..+..|+.||.+||+|+|.+| +.|||+||+|||+.....+||+|||+||....
T Consensus 89 fE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S- 162 (538)
T KOG0661|consen 89 FEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS- 162 (538)
T ss_pred HHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc-
Confidence 9999 57999999987 567999999999999999999999999 99999999999999999999999999996543
Q ss_pred CCCCCccceeeeeccCCCCccChhhhc-cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh----
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS---- 854 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~---- 854 (958)
....+..+.|..|+|||++. .+-|+.+.||||+||+++|+.+-++-|.+..+..+..+.+.--|...+
T Consensus 163 -------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 163 -------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred -------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 22345567899999999986 457899999999999999999999888877776666554433222110
Q ss_pred -------hhcccCC--------CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 -------IIDNRMG--------SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 -------~i~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+.-.++ ..-+.+..+..+++.+|+..||++|||++|++++
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111 1122477889999999999999999999999985
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-40 Score=358.70 Aligned_cols=247 Identities=29% Similarity=0.451 Sum_probs=213.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|...+.||+|+||+||||+.+ +.+.||+|.+.+.. .++.+...+|+++++.++|||||.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 45777788999999999999977 68899999987643 3445678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+.| +|..+|.... .++++.+..++.|++.||.|||+.+ |+|||+||+|||++..|.+|++|||+|+....
T Consensus 82 ~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMST--- 152 (808)
T ss_pred hhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhccc---
Confidence 9965 9999997654 4999999999999999999999999 99999999999999999999999999996532
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.....+.+.||+-|||||...++.|+..+|.||+||++||+++|++||.. ..+.+.+..... ...
T Consensus 153 ----~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-~si~~Lv~~I~~----------d~v 217 (808)
T KOG0597|consen 153 ----NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-RSITQLVKSILK----------DPV 217 (808)
T ss_pred ----CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHhc----------CCC
Confidence 24556778999999999999999999999999999999999999999963 333333333222 222
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..|......+..++...+.+||.+|.+..+++.+
T Consensus 218 ~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 3466788889999999999999999999999876
No 23
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-40 Score=389.50 Aligned_cols=264 Identities=33% Similarity=0.501 Sum_probs=217.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC--Cc----EEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD--NT----TVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
...+..+.||+|+||.||+|...+ +. .||||.++.. +.++..+|.+|..+|+.++|||||+++|+|.+.+..+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 344556789999999999999653 43 4999999875 4566778999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC-----CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 698 LVYEFVPNGTLRDWLSGRT-----KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
+++|||++|+|..+|++.+ ...++....+.++.|||+|+.||++++ +|||||.++|+|+++...|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccch
Confidence 9999999999999998652 345899999999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGM 851 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~ 851 (958)
|+.....+-. .......=..+|||||.++.+.++.|+|||||||++||++| |..||.+..+..-... ..
T Consensus 849 ArDiy~~~yy-----r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~-~~---- 918 (1025)
T KOG1095|consen 849 ARDIYDKDYY-----RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD-VL---- 918 (1025)
T ss_pred hHhhhhchhe-----eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH-HH----
Confidence 9943221110 00001122358999999999999999999999999999999 8999976544322221 11
Q ss_pred chhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 852 VFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 852 ~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
.+.+...|..||+.++++|.+||+.+|++||++..+++++.++.......
T Consensus 919 -----~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 919 -----EGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred -----hCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 12233458899999999999999999999999999999999988665443
No 24
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=367.62 Aligned_cols=269 Identities=30% Similarity=0.479 Sum_probs=220.1
Q ss_pred HHHHHHHcCCCCCceeeeeCCeEEEEEEECC--C--cE-EEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEE
Q 002158 618 KELAMATAYFSSSTQVGQGGYGKVYKGILSD--N--TT-VAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGY 689 (958)
Q Consensus 618 ~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~--~--~~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~ 689 (958)
..++...++....++||+|+||.||+|.++. + .. ||||..+.. ......+|.+|+++|++++|||||+++|+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3444455566666899999999999999753 2 23 899998852 35567789999999999999999999999
Q ss_pred EEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEee
Q 002158 690 CDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 690 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
+..+..+++|||+|+||+|.++|+.... .++..++++++.++|+||+|||+++ +|||||.++|+|++.++.+||+|
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISD 305 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISD 305 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCc
Confidence 9999999999999999999999986554 5999999999999999999999999 99999999999999999999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhh
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~ 848 (958)
||+++....... ......-..+|+|||.+....|+.++|||||||++||+++ |..||.+........... .
T Consensus 306 FGLs~~~~~~~~-------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~-~ 377 (474)
T KOG0194|consen 306 FGLSRAGSQYVM-------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV-K 377 (474)
T ss_pred cccccCCcceee-------ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH-h
Confidence 999875431110 0001124568999999999999999999999999999999 889998665432221111 1
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
.......+...|..+..++.+||..+|++||+|.++.+.++.+.+.....
T Consensus 378 --------~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 378 --------NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred --------cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 12223446678899999999999999999999999999999988766543
No 25
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=355.54 Aligned_cols=265 Identities=29% Similarity=0.438 Sum_probs=216.3
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhc-HHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQG-QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
........++||+|-||+|..+....+..||||+++...... +++|.+|+++|.+++||||++++|+|..++.+++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 334456678999999999999999888999999998865444 5789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
||++|+|..++.......+..+...+|+.|||.|++||.+.. +||||+.++|+|+|.++++||+|||++|-+...+.
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc
Confidence 999999999998775544566777899999999999999998 99999999999999999999999999996543321
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh--CCCCCCCCchhHHHHHHHhhcCcchh-hhcc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT--GMQPISHGKNIVREVNVARDSGMVFS-IIDN 858 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt--G~~P~~~~~~~~~~~~~~~~~~~~~~-~i~~ 858 (958)
.+.....+=..+|||||.+..+++++++|||+||+++||+++ ...||....+.... ...+.+.. .-..
T Consensus 693 -----y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv----en~~~~~~~~~~~ 763 (807)
T KOG1094|consen 693 -----YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV----ENAGEFFRDQGRQ 763 (807)
T ss_pred -----eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH----HhhhhhcCCCCcc
Confidence 222223445679999999999999999999999999999987 67788654322111 11111111 0011
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.....|.-|+..+++++.+||..|-++||+++++...|++.
T Consensus 764 ~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 764 VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11345788999999999999999999999999999988764
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-40 Score=330.50 Aligned_cols=236 Identities=25% Similarity=0.369 Sum_probs=206.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh---cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ---GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||.|+||+|..++.+ +|..+|+|++.....- ..+...+|..+|+.+.||.++++++.+.+.+..||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 35777889999999999999987 6889999999875433 3445778999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||++||.|..+++..++ +++..+..+|.||+.||+|||+.+ |++||+||+|||+|.+|.+||+|||.|+...
T Consensus 124 eyv~GGElFS~Lrk~~r--F~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR--FSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred eccCCccHHHHHHhcCC--CCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 99999999999976554 999999999999999999999999 9999999999999999999999999998762
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
..+.+.+||+.|+|||++....|..++|.|||||++|||+.|.+||.....+.. ++.|-..-
T Consensus 196 -------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i-----------Y~KI~~~~ 257 (355)
T KOG0616|consen 196 -------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI-----------YEKILEGK 257 (355)
T ss_pred -------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH-----------HHHHHhCc
Confidence 235678999999999999999999999999999999999999999986554222 12222233
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCC
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHR 886 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~R 886 (958)
-.+|.-....+.+|+...++.|-.+|
T Consensus 258 v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 258 VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 35677888899999999999999999
No 27
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9.6e-40 Score=323.37 Aligned_cols=258 Identities=26% Similarity=0.366 Sum_probs=208.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc--HHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG--QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|...+.||+|.||.||+|++. +|+.||||+++.....+ .....+|++.|+.++|+||+.++++|...+..-||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 4566778999999999999965 79999999998764433 34578999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
|+ .+|+..++++. ..++..++..++.++.+|++|||++. |+||||||.|+|++++|.+||+|||+|+.+...+..
T Consensus 83 m~-tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 83 MP-TDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred cc-ccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 95 69999998664 45999999999999999999999999 999999999999999999999999999987543332
Q ss_pred CCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc--
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR-- 859 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~-- 859 (958)
. +..+-|..|.|||.+.+. .|+...||||.||++.||+-|.+-|.+..++.+.......-+......-+.
T Consensus 158 ~-------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 158 Q-------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred c-------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence 1 222578899999999875 689999999999999999998877766666655544333222211100000
Q ss_pred ---------------CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 ---------------MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ---------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....-..+.....+++.+++..||.+|.++.|++++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 011223456677999999999999999999999974
No 28
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=341.79 Aligned_cols=263 Identities=28% Similarity=0.439 Sum_probs=199.7
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHcc--CCCCcceEEEEEEeCC----eEEEEEEec
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL--HHRNLVSLLGYCDEEG----EQMLVYEFV 703 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~~----~~~lV~E~~ 703 (958)
.++||+|+||.||||.+ +++.||||++.. .+...|++|-++++-. +|+||++++++-.... +++||+||.
T Consensus 215 ~eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred HHHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 45799999999999998 458999999964 4456788888888865 7999999999976655 899999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc------CCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE------AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~------~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+.|+|.+||+... ++|....+|+..+++||+|||+. .+|+|+|||||++||||..|+++.|+|||+|..+.
T Consensus 291 ~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~ 367 (534)
T KOG3653|consen 291 PKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE 367 (534)
T ss_pred cCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence 9999999998665 99999999999999999999975 36789999999999999999999999999998876
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCC-C-----CCcchhhhHHHHHHHHHhCCCCCCCCc------hhHHHHHH
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK-L-----TDKSDVYSLGVVLLELLTGMQPISHGK------NIVREVNV 845 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-----~~~~DV~S~Gv~l~elltG~~P~~~~~------~~~~~~~~ 845 (958)
.....+ .....+||.+|||||++.+.- + -.+.||||+|.+||||+++..-++.+. .....+..
T Consensus 368 p~~~~~-----d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 368 PGKPQG-----DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred CCCCCc-----chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 433322 223468999999999997642 1 237999999999999999765442110 01111100
Q ss_pred HhhcCcchh-hh-cccCCCCCh-----HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 846 ARDSGMVFS-II-DNRMGSYPS-----ECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 846 ~~~~~~~~~-~i-~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
...-+.+.+ ++ ++.++.+|. ..+..+.+.+..||+.||+.|.|+.=+.+.+.++....+
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 000000000 01 122233332 345678999999999999999999998888887664433
No 29
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=351.23 Aligned_cols=261 Identities=22% Similarity=0.338 Sum_probs=210.7
Q ss_pred CCccccChHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhc---HHHHHHHHHHHHccCCCCcceE
Q 002158 610 DGVKGFKFKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQG---QNEFLTEIKLLSRLHHRNLVSL 686 (958)
Q Consensus 610 ~~~~~~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l 686 (958)
.+++.++.+++ +......||+|++|.||+|.+ +|+.||||+++...... .+.|.+|++++++++||||+++
T Consensus 10 ~~~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~ 83 (283)
T PHA02988 10 NDIKCIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI 83 (283)
T ss_pred CcceecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 34555666666 233346899999999999998 78899999987643332 4678899999999999999999
Q ss_pred EEEEEe----CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecC
Q 002158 687 LGYCDE----EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDS 761 (958)
Q Consensus 687 ~~~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~ 761 (958)
+|++.+ ....++||||+++|+|.+++.... .+++..+.+++.|++.||.|||+. + ++||||||+||++++
T Consensus 84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~ 158 (283)
T PHA02988 84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTE 158 (283)
T ss_pred eeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECC
Confidence 999876 347899999999999999997643 488999999999999999999985 6 889999999999999
Q ss_pred CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCchh
Q 002158 762 NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLTGMQPISHGKNI 839 (958)
Q Consensus 762 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~ 839 (958)
++.+||+|||+++..... .....|+..|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 159 ~~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~ 228 (283)
T PHA02988 159 NYKLKIICHGLEKILSSP----------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK 228 (283)
T ss_pred CCcEEEcccchHhhhccc----------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH
Confidence 999999999998854221 112358899999999976 67899999999999999999999999754322
Q ss_pred HHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 840 VREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 840 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
......... ......+..++..+.+++.+||+.||++||+++|+++.|+...
T Consensus 229 -~~~~~i~~~--------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 229 -EIYDLIINK--------NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred -HHHHHHHhc--------CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 211111111 1112234467889999999999999999999999999998865
No 30
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.3e-40 Score=350.48 Aligned_cols=259 Identities=26% Similarity=0.348 Sum_probs=205.1
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~ 700 (958)
.|+..++||+|+||.||+|++. +|+.||+|++.-.. .....-..+||.+|++++||||+++.+...+. +.+|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 3444578999999999999964 79999999987643 33344568999999999999999999998776 7899999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|||+. +|.-++... ...|+..++..++.|++.||+|||++| |+|||||.+|||||.+|.+||+|||+|+++....
T Consensus 198 eYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 198 EYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred ecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 99975 888888643 345999999999999999999999999 9999999999999999999999999999875433
Q ss_pred CCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc-
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN- 858 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~- 858 (958)
. ...+..+-|..|.|||.+.+. .|+.+.|+||.||+|.||++|++.|.+..++.+.-....-.+...+...+
T Consensus 273 ~------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~ 346 (560)
T KOG0600|consen 273 S------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPV 346 (560)
T ss_pred C------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccc
Confidence 2 123455678999999999886 69999999999999999999999998766655543332222211110000
Q ss_pred -cC---------CCCC-------hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 -RM---------GSYP-------SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 -~~---------~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+ ..+. ...+....+|+..++..||++|.|+.++++.
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 00 0111 1345567889999999999999999999863
No 31
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=359.62 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=209.4
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC----Ch-hcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG----SL-QGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGE 695 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 695 (958)
....|...+.||+|+||+||.|.+. +++.||||++... .. ...+...+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 3457888899999999999999865 6899999977653 11 22445668999999998 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeeeec
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGLSR 774 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla~ 774 (958)
.++||||+.+|+|.+++... .++.+.++.+++.|++.|++|||++| |+||||||+|||+|.+ +++||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 99999999999999999873 44888999999999999999999999 9999999999999999 999999999998
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCC-CC-CcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK-LT-DKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
..+. ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++.. .......
T Consensus 170 ~~~~-------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-~~~l~~k------- 234 (370)
T KOG0583|consen 170 ISPG-------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-VPNLYRK------- 234 (370)
T ss_pred ccCC-------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-HHHHHHH-------
Confidence 7631 122345678999999999999977 86 58999999999999999999998633 2222211
Q ss_pred hhhhcccCCCCChHH-HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 853 FSIIDNRMGSYPSEC-VERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
+......+|... ..++..++.+|+..||.+|+++.+|++
T Consensus 235 ---i~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 235 ---IRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred ---HhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 222333445556 889999999999999999999999994
No 32
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-40 Score=354.66 Aligned_cols=263 Identities=30% Similarity=0.475 Sum_probs=222.7
Q ss_pred HHHHHHHcCCCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 618 KELAMATAYFSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 618 ~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
.+++....++...++||-|-||.||.|.|+. .-.||||.++.+ .-..++|+.|+.+|+.++|||+|+++|+|..+..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 5666677777888999999999999999985 568999999874 34567899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
|||+|||.+|+|.|||++..+..++....+.++.||+.|++||..++ +|||||.++|+|+.++..+||+|||+++++
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999988888999999999999999999999998 999999999999999999999999999987
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
..+. +.. .....-.+.|.|||.+....++.|+|||+|||+|||+.| |..||.+-+ +.+.+. ....+.
T Consensus 416 tgDT----YTA--HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-lSqVY~-LLEkgy---- 483 (1157)
T KOG4278|consen 416 TGDT----YTA--HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYG-LLEKGY---- 483 (1157)
T ss_pred cCCc----eec--ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-HHHHHH-HHhccc----
Confidence 3211 111 112223467999999999999999999999999999999 899996432 222211 111111
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
+-+.|..||+.+++||+.||+.+|.+||+++|+-+.++.+.
T Consensus 484 ----RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 484 ----RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred ----cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 12447889999999999999999999999999999988765
No 33
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.2e-40 Score=319.11 Aligned_cols=250 Identities=28% Similarity=0.402 Sum_probs=215.7
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
+-++|++.+.||+|.||.||.|+.+ ++-.||+|++.+... .-..++.+|+++-+.++||||+++|+++.+....||
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 3457889999999999999999975 678999999876432 224568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
++||.++|.++..|+++....+++.....+..|+|.|+.|+|..+ ||||||||+|+|++.++..||+|||.+...+
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 999999999999999777777999999999999999999999998 9999999999999999999999999987542
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
.......+||..|.+||...+..++..+|+|++|++.||++.|.+||.... ..+.. +.|..
T Consensus 176 --------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etY----------krI~k 236 (281)
T KOG0580|consen 176 --------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETY----------KRIRK 236 (281)
T ss_pred --------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHH----------HHHHH
Confidence 223456789999999999999999999999999999999999999997433 11211 22222
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+|...+....++|.+|+..+|.+|....|++++
T Consensus 237 ~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 237 VDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ccccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 2234567788899999999999999999999999986
No 34
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-38 Score=349.03 Aligned_cols=251 Identities=24% Similarity=0.359 Sum_probs=204.5
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
|...+.||+|+||+||+|.+. +++.||||.+..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 667789999999999999975 789999999865322 2334678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-- 156 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--
Confidence 99999999886554446899999999999999999999999 9999999999999999999999999987642211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
......||..|+|||++.+..++.++|||||||++|||++|+.||............. ..+......
T Consensus 157 ------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~-------~~~~~~~~~ 223 (285)
T cd05631 157 ------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD-------RRVKEDQEE 223 (285)
T ss_pred ------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHH-------HHhhccccc
Confidence 1123468999999999999999999999999999999999999997543211110000 011111123
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
++...+..+.+++.+||+.||++||+ +++++++
T Consensus 224 ~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 224 YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 34556778999999999999999997 7888764
No 35
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-40 Score=346.99 Aligned_cols=249 Identities=27% Similarity=0.417 Sum_probs=212.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..|...+.||+|.||.||+|.+. .++.||+|++.-... .+.++.++|+.++.+.+++||.++||.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 35666789999999999999975 689999999986543 3456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
|.||++.+.++... .+++..+.-+..++..|+.|||.++ .+|||||+.|||+..+|.+||+|||.+-.+....
T Consensus 93 ~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~-- 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV-- 165 (467)
T ss_pred hcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh--
Confidence 99999999997544 2578888889999999999999999 9999999999999999999999999987653221
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.....++||+.|||||++....|+.|+||||||++.+||.+|.+|+.+... ...++.+.....+.
T Consensus 166 -----~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----------mrvlflIpk~~PP~ 230 (467)
T KOG0201|consen 166 -----KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP----------MRVLFLIPKSAPPR 230 (467)
T ss_pred -----hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc----------ceEEEeccCCCCCc
Confidence 122568899999999999988999999999999999999999999975332 22333333444455
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+...+.+.+.+++..|++.||+.||++.+++++
T Consensus 231 L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 231 LDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 556788899999999999999999999999864
No 36
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.4e-38 Score=361.53 Aligned_cols=259 Identities=27% Similarity=0.425 Sum_probs=206.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEE------CCCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGIL------SDNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGE 695 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 695 (958)
.++|+..+.||+|+||.||+|++ ..+..||||+++... ....+.+.+|+++++.+ +||||++++++|...+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 44677889999999999999974 235689999987542 33456788999999999 89999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCC-----------------------------------------------------------
Q 002158 696 QMLVYEFVPNGTLRDWLSGRT----------------------------------------------------------- 716 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------- 716 (958)
.++||||+++|+|.++++...
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999996432
Q ss_pred --------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 717 --------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 717 --------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
...+++..+.+++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 269 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSN- 269 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCccc-
Confidence 124788899999999999999999998 99999999999999999999999999976532211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
........++..|+|||++.+..++.++|||||||++|||++ |..||............... + ...
T Consensus 270 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~--------~~~ 336 (375)
T cd05104 270 ----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE-G--------YRM 336 (375)
T ss_pred ----ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh-C--------ccC
Confidence 011112335678999999999999999999999999999998 88898654322222211111 1 011
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
..+...+.++.+++.+||+.||++||+++|+++.|++.
T Consensus 337 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 12334567899999999999999999999999999864
No 37
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.8e-38 Score=348.26 Aligned_cols=262 Identities=29% Similarity=0.432 Sum_probs=203.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC-----------------CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD-----------------NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSL 686 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l 686 (958)
.+|...+.||+|+||.||+|.+++ +..||+|.+.... .....+|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467778899999999999998642 3369999987643 3345679999999999999999999
Q ss_pred EEEEEeCCeEEEEEEecCCCCHHHHhccCC-----------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeec
Q 002158 687 LGYCDEEGEQMLVYEFVPNGTLRDWLSGRT-----------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFH 749 (958)
Q Consensus 687 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH 749 (958)
++++...+..++||||+++|+|.+++.... ...+++.++.+++.|++.||+|||+.+ |+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 999999999999999999999999986432 123688899999999999999999999 999
Q ss_pred cCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-
Q 002158 750 RDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT- 828 (958)
Q Consensus 750 ~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt- 828 (958)
|||||+|||+++++.+||+|||+++....... ........++..|+|||++....++.++||||||+++|||++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHc
Confidence 99999999999999999999999875422111 111223346789999999998999999999999999999997
Q ss_pred -CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 829 -GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 829 -G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
+..||........ ...... .............+..++..+.+++.+||+.||++||++.+|.+.|+
T Consensus 237 ~~~~p~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 237 CKEQPYGELTDEQV-IENAGE--FFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred cCCCCCCcCCHHHH-HHHHHH--HhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 5567764332111 111000 00000000011224456788999999999999999999999998875
No 38
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.2e-38 Score=351.67 Aligned_cols=242 Identities=22% Similarity=0.285 Sum_probs=200.7
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
+.||+|+||.||+|..+ +|+.||||+++... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999975 68999999987532 223456789999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcc
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMP 786 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 786 (958)
+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~------ 149 (323)
T cd05571 81 ELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG------ 149 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC------
Confidence 9999997543 4899999999999999999999999 9999999999999999999999999987432111
Q ss_pred ceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChH
Q 002158 787 THVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSE 866 (958)
Q Consensus 787 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 866 (958)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...... ......++..
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~~----------~~~~~~~p~~ 217 (323)
T cd05571 150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFELI----------LMEEIRFPRT 217 (323)
T ss_pred -CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-HHHHHH----------HcCCCCCCCC
Confidence 1123456999999999999999999999999999999999999999754322 111111 1111233556
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 867 CVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 867 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.+.++.+++.+||+.||++|| ++.+++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 678899999999999999999 78998864
No 39
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=352.35 Aligned_cols=245 Identities=23% Similarity=0.334 Sum_probs=203.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|+++ +++.||||++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 45777889999999999999986 68999999986532 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 9999999999997543 4888899999999999999999999 999999999999999999999999998754211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+...... ..... ...
T Consensus 172 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~i~----------~~~ 231 (329)
T PTZ00263 172 ---------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI-YEKIL----------AGR 231 (329)
T ss_pred ---------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH-HHHHh----------cCC
Confidence 1234699999999999999999999999999999999999999975443211 11111 111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
..+|...+..+.+++.+||+.||.+||+ +++++++
T Consensus 232 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 232 LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1234445677899999999999999987 6777765
No 40
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.6e-38 Score=358.90 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=207.8
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE 693 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 693 (958)
...++|+..+.||+|+||.||+|++. ++..||||++.... ......+.+|+++++.+ +|+||++++++|...
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 34457888899999999999999852 24579999997643 33345688999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCC---------------------------------------------------------
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRT--------------------------------------------------------- 716 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~--------------------------------------------------------- 716 (958)
+..++||||+++|+|.++++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 99999999999999999985421
Q ss_pred -----------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 717 -----------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 717 -----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
...+++.++++++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.......
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~---- 267 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN---- 267 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcc----
Confidence 124788899999999999999999998 99999999999999999999999999975432111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
........++..|+|||++.+..++.++|||||||++|||++ |+.||............. ..+ .....+
T Consensus 268 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~-~~~--------~~~~~~ 337 (374)
T cd05106 268 -YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV-KRG--------YQMSRP 337 (374)
T ss_pred -eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH-Hcc--------cCccCC
Confidence 111122345678999999999999999999999999999997 999996533211111111 100 011123
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
...+.++.+++.+||+.||++||++.++++.|++++
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 334678999999999999999999999999999865
No 41
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=346.17 Aligned_cols=260 Identities=28% Similarity=0.501 Sum_probs=218.5
Q ss_pred HHHHcCCCCCceeeeeCCeEEEEEEECC---C--cEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC
Q 002158 621 AMATAYFSSSTQVGQGGYGKVYKGILSD---N--TTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG 694 (958)
Q Consensus 621 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 694 (958)
+..++.....++||+|-||.||+|++.+ | -.||||.-+.+ ...+.+.|+.|..+|+.++||||++++|+|.+.
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~- 463 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ- 463 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-
Confidence 3445556667899999999999999642 2 35899988874 555677899999999999999999999999875
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++|||.++-|.|++||+.+. ..++......++.|+..||+|||+.. +|||||..+|||+.....+||+|||++|
T Consensus 464 P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhh
Confidence 7899999999999999998654 45999999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcch
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
.+....- ...+...=...|||||.+.-..++.++|||.|||.+||++. |..||.+-++ .+.+.
T Consensus 540 ~~ed~~y------YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN----------sDVI~ 603 (974)
T KOG4257|consen 540 YLEDDAY------YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN----------SDVIG 603 (974)
T ss_pred hccccch------hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc----------cceEE
Confidence 8754321 11222334567999999999999999999999999999999 9999976433 22233
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
.+-.+.+...|+.||..++.|+.+||..+|.+||.+.|+...|.+++.
T Consensus 604 ~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 333344566789999999999999999999999999999999998875
No 42
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1e-38 Score=350.27 Aligned_cols=245 Identities=22% Similarity=0.303 Sum_probs=203.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36788899999999999999986 68999999986432 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~-- 153 (291)
T cd05612 81 EYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-- 153 (291)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccC--
Confidence 9999999999997544 4889999999999999999999999 99999999999999999999999999875421
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... ...
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-~~~~~i~----------~~~ 214 (291)
T cd05612 154 --------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-GIYEKIL----------AGK 214 (291)
T ss_pred --------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH----------hCC
Confidence 112346899999999999999999999999999999999999999754332 1111111 111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
..++...+..+.+++.+||+.||.+||+ +++++++
T Consensus 215 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 215 LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 2234455678899999999999999995 7787764
No 43
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.2e-38 Score=339.57 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=207.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
++|+..+.||+|+||.||+|.++ .+..||+|.++... ....+.|.+|+..+++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46778889999999999999864 36689999988653 33346799999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||.+......
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 99999999999997543 35899999999999999999999999 999999999999999999999999987643111
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
. ........++..|+|||.+.+..++.++|||||||++||+++ |..||...... ....... +.
T Consensus 161 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-~~~~~~~---------~~ 224 (266)
T cd05064 161 A------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-DVIKAVE---------DG 224 (266)
T ss_pred c------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HHHHHHH---------CC
Confidence 0 011112335678999999999999999999999999999875 99999754322 1111111 11
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.....+..++..+.+++.+||+.+|++||+++++.+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11223556778899999999999999999999999988764
No 44
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.3e-38 Score=340.16 Aligned_cols=249 Identities=37% Similarity=0.624 Sum_probs=198.7
Q ss_pred CceeeeeCCeEEEEEEEC-----CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 630 STQVGQGGYGKVYKGILS-----DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.+.||.|.||.||+|.+. .+..|+||.++.. .....+.|.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 468999999999999986 2678999999664 3344678999999999999999999999999888899999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++|+|.++|+......+++.++..|+.|+|+||+|||+.+ ++|+||+++||++++++.+||+|||+++.......
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~-- 158 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK-- 158 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS--
T ss_pred cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc--
Confidence 9999999999875566999999999999999999999998 99999999999999999999999999876511110
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
........+...|+|||.+....++.++||||||+++|||++ |+.||.+... ........ +.....
T Consensus 159 ---~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~~~~~~~~---------~~~~~~ 225 (259)
T PF07714_consen 159 ---YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-EEIIEKLK---------QGQRLP 225 (259)
T ss_dssp ---EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-HHHHHHHH---------TTEETT
T ss_pred ---ccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc---------ccccce
Confidence 122223446778999999999999999999999999999999 7888865432 22221111 111223
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.+..++..+.+++.+||+.+|++||++.++++.|
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 3556778899999999999999999999999876
No 45
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-38 Score=350.63 Aligned_cols=245 Identities=27% Similarity=0.379 Sum_probs=210.5
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
|...+.||+|+-|.|..|++. +|+.+|||++.+.. ......+.+|+-+|+-+.|||++++|+++++..++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 455678999999999999975 79999999987652 12234578999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++|-|.+++-.++ ++++.++.+++.||+.|+.|+|..+ |+|||+||+|+|+|..+++||+|||+|.+...
T Consensus 94 v~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~---- 164 (786)
T KOG0588|consen 94 VPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP---- 164 (786)
T ss_pred cCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC----
Confidence 99999999997654 4999999999999999999999999 99999999999999999999999999986422
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCC-cchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
......-+|++.|.|||++++.+|+- ++||||.||+||.|+||+.||++ +++...+... .....
T Consensus 165 ----gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-dNir~LLlKV----------~~G~f 229 (786)
T KOG0588|consen 165 ----GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-DNIRVLLLKV----------QRGVF 229 (786)
T ss_pred ----CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-ccHHHHHHHH----------HcCcc
Confidence 23344568999999999999999875 99999999999999999999984 4443333222 22223
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
++|...+.+..+|+.+|+..||++|-|++||++|
T Consensus 230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 5578889999999999999999999999999987
No 46
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-38 Score=331.03 Aligned_cols=270 Identities=22% Similarity=0.364 Sum_probs=205.4
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHcc--CCCCcceEEEEEEeC----
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL--HHRNLVSLLGYCDEE---- 693 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~---- 693 (958)
...........+.||+|.||+||+|.| .|+.||||++... +.+.+.+|.++++.. +|+||+.+++.-..+
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred HHhhhheeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 344455677889999999999999999 6889999999753 344567888888765 999999999986543
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-----cCCCCeeccCCCccceEecCCCCeEEe
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-----EAHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-----~~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
.+++||++|.+.|||+|||... .++.+..++++..+|.||+|||. +|+|.|.|||||+.|||+..++.+.|+
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 3689999999999999999764 38999999999999999999995 578999999999999999999999999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCC------CCCcchhhhHHHHHHHHHhC----------CCC
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVLLELLTG----------MQP 832 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DV~S~Gv~l~elltG----------~~P 832 (958)
|+|+|...+...+.-..+ ....+||.+|||||++...- .-..+||||||.++||+..+ +.|
T Consensus 359 DLGLAv~h~~~t~~idi~---~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIP---PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred eceeeEEecccCCcccCC---CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 999998765544332222 23457999999999996431 12379999999999999874 446
Q ss_pred CCCC---chhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 833 ISHG---KNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 833 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
|.+- +...+.++...-.......+.+++ ...++...+.++|+.||..+|..|-++-.+-+.|.++.+
T Consensus 436 yyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW--~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 436 YYDVVPSDPSFEEMRKVVCVQKLRPNIPNRW--KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred cccCCCCCCCHHHHhcceeecccCCCCCccc--ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 6432 111222221111111111111111 123677889999999999999999999999988888764
No 47
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.6e-38 Score=319.22 Aligned_cols=258 Identities=24% Similarity=0.279 Sum_probs=205.8
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc--HHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG--QNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~ 700 (958)
.|+..+.|++|+||.||+|+++ +++.||+|+++-..... --..++|+.+|.+++|||||.+-.+... -+..|+||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 4666789999999999999986 68999999987543222 1235799999999999999999988754 45799999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|||+. +|...++.-. +++...++.-+..|+++|++|||++. |+|||||++|+|+.+.|.+||+|||+||.+...
T Consensus 157 e~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp- 230 (419)
T KOG0663|consen 157 EYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP- 230 (419)
T ss_pred HHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC-
Confidence 99965 9999997554 56999999999999999999999999 999999999999999999999999999976432
Q ss_pred CCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
....+..+-|..|.|||.+.+. .|++..|+||+||++.||+++++-|.+...+.+.......-+...+.+.+.
T Consensus 231 ------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 231 ------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred ------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 2233456679999999999876 589999999999999999999988877666555544433333332222222
Q ss_pred CCC--------------------CChH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGS--------------------YPSE-CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~--------------------~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... ++.. ..+.-.+++...+..||++|-|++|.+++
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 111 1111 34667899999999999999999999974
No 48
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.7e-38 Score=338.73 Aligned_cols=261 Identities=21% Similarity=0.324 Sum_probs=206.5
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
...++|+..++||+|+||.||.|+-+ +|..+|+|++++... .+.+....|-.+|....+|+||+++-.|.+.+.+|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 35678999999999999999999965 699999999987533 33456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
|||||+|||++..+|...+ .|++..+..++.+++-|++.+|+.| +|||||||+|+|||..|++||+|||++.-+.
T Consensus 218 LiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999999997544 4999999999999999999999999 9999999999999999999999999995432
Q ss_pred cCC------------------CCCCcc-----ce-----------------eeeeccCCCCccChhhhccCCCCCcchhh
Q 002158 778 VLD------------------DEGTMP-----TH-----------------VSTIVKGTPGYLDPEYFLTHKLTDKSDVY 817 (958)
Q Consensus 778 ~~~------------------~~~~~~-----~~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~~DV~ 817 (958)
... .....+ .. .....+|||.|||||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 100 000011 00 11235799999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCC---HHHHHH
Q 002158 818 SLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPS---MSDVVR 894 (958)
Q Consensus 818 S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 894 (958)
|+||++|||+.|-+||........+-... ........ .-...+..+..++|.+|+. ||++|-- ++||-+
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~-nwr~~l~f------P~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIV-NWRETLKF------PEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhhccC------CCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 99999999999999998655433222211 10000000 0012344888999999999 9999964 666654
Q ss_pred H
Q 002158 895 E 895 (958)
Q Consensus 895 ~ 895 (958)
+
T Consensus 445 H 445 (550)
T KOG0605|consen 445 H 445 (550)
T ss_pred C
Confidence 3
No 49
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.1e-37 Score=341.73 Aligned_cols=259 Identities=24% Similarity=0.284 Sum_probs=202.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|...+.||+|+||+||+|+++ +++.||||++.... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 6788899999999999999986 68899999987542 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++++.+..+.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 155 (287)
T cd07848 82 VEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN- 155 (287)
T ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccccc-
Confidence 9987776655332 34889999999999999999999999 99999999999999999999999999986532111
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc----------
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV---------- 852 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~---------- 852 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||................+..
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 156 -----ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred -----ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 11123468999999999999899999999999999999999999997644322211111100000
Q ss_pred ----hhhhcccC-------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 ----FSIIDNRM-------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ----~~~i~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+.. .......+..+.+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000 00112356679999999999999999999999864
No 50
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.2e-37 Score=344.85 Aligned_cols=242 Identities=23% Similarity=0.285 Sum_probs=199.6
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
+.||+|+||.||++... +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999975 68999999987532 233456788999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcc
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMP 786 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 786 (958)
+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~------ 149 (323)
T cd05595 81 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG------ 149 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC------
Confidence 9999986543 4899999999999999999999999 9999999999999999999999999987431111
Q ss_pred ceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChH
Q 002158 787 THVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSE 866 (958)
Q Consensus 787 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 866 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... .....+|..
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~~~~~----------~~~~~~p~~ 217 (323)
T cd05595 150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELIL----------MEEIRFPRT 217 (323)
T ss_pred -CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-HHHHh----------cCCCCCCCC
Confidence 112235699999999999999999999999999999999999999975432211 11111 111123455
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 867 CVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 867 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
++..+.+++.+||+.||++|| ++.+++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 678899999999999999998 88888864
No 51
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=352.93 Aligned_cols=244 Identities=26% Similarity=0.406 Sum_probs=206.8
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 696 (958)
...++|...++||+|.||+|+++..+ +++.+|||++++.. ..+.+..+.|.+++... +||.++.++.++...+++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34567888999999999999999987 68899999998864 33455678898888887 599999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
|+||||+.||++..+.+. ..+++..+.-++..++.||+|||+++ ||+||||-+|||+|.+|.+||+|||+++..
T Consensus 445 ~fvmey~~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEecCCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999995555543 34999999999999999999999999 999999999999999999999999999853
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
.. ....+.+++||+.|||||++.+..|+.++|.|||||+||||+.|+.||.++... +. ++.|
T Consensus 519 m~-------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-e~----------FdsI 580 (694)
T KOG0694|consen 519 MG-------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-EV----------FDSI 580 (694)
T ss_pred CC-------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-HH----------HHHH
Confidence 21 233456789999999999999999999999999999999999999999754432 11 2222
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSM 889 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 889 (958)
-..-..+|..++.+..+|+.+++..+|++|.-+
T Consensus 581 ~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 581 VNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred hcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 222345688899999999999999999999765
No 52
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=8.8e-38 Score=349.91 Aligned_cols=252 Identities=27% Similarity=0.339 Sum_probs=205.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+|+..+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5788899999999999999986 58899999987532 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 82 YVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 999999999997543 4889999999999999999999999 99999999999999999999999999875422
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ............ .+...
T Consensus 154 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~--~~~~~ 223 (333)
T cd05600 154 -------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-WENLKYWKETLQ--RPVYD 223 (333)
T ss_pred -------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-HHHHHhcccccc--CCCCC
Confidence 12335699999999999999999999999999999999999999975433221 111111000000 00000
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+.++.+++.+|+..+|++||++++++++
T Consensus 224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 224 DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0012456788999999999999999999999976
No 53
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-38 Score=359.71 Aligned_cols=263 Identities=24% Similarity=0.395 Sum_probs=213.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCC-cEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEE-EE---e---CCe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDN-TTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGY-CD---E---EGE 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~-~~---~---~~~ 695 (958)
.+.++.+.|.+|||+.||.|.+..+ ..||+|++...+..+.+...+|+++|+.+. |+|||.+++. .. . .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 3455678999999999999998765 999999998878888888999999999996 9999999993 21 1 236
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
++|.||||+||.|-|++..+....|++.++++|+.|+++|+++||... +||||||||-+||||..++..||||||.|.-
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 789999999999999998776666999999999999999999999875 8999999999999999999999999999863
Q ss_pred cccCC--CCCCccceeeeeccCCCCccChhhh---ccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 776 APVLD--DEGTMPTHVSTIVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 776 ~~~~~--~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
-.... ..+...-.......-|+-|+|||++ .+...+.|+||||+||+||-|+-...||++...+
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----------- 264 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----------- 264 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-----------
Confidence 21111 0010001112233478999999998 4668899999999999999999999999864321
Q ss_pred cchhhhcccCCCCC--hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 851 MVFSIIDNRMGSYP--SECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 851 ~~~~~i~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
.++.... .+| +.+...+.+||..||+.||.+||++.+|+.++.++...-
T Consensus 265 ---aIlng~Y-~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 265 ---AILNGNY-SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ---eEEeccc-cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 1222222 222 478899999999999999999999999999998887544
No 54
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.1e-38 Score=350.51 Aligned_cols=245 Identities=24% Similarity=0.347 Sum_probs=203.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC--CcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD--NTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
++|...+.||+|+||.||+|.++. +..||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 467888999999999999998653 3689999986432 22345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~- 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT- 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence 99999999999997544 4889999999999999999999999 99999999999999999999999999975421
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
......||+.|+|||++.+..++.++|||||||++|||++|..||......... .... ..
T Consensus 184 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~-~~i~----------~~ 243 (340)
T PTZ00426 184 ---------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIY-QKIL----------EG 243 (340)
T ss_pred ---------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHH-HHHh----------cC
Confidence 112356999999999999988999999999999999999999999765432211 1111 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
...+|...+..+.+++.+|++.||++|+ ++++++++
T Consensus 244 ~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 244 IIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1223445567789999999999999995 88888765
No 55
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.6e-37 Score=335.23 Aligned_cols=255 Identities=26% Similarity=0.445 Sum_probs=209.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.++|+..+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 35678889999999999999998888899999987543 23567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.++++......+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-- 158 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-- 158 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce--
Confidence 9999999997665556899999999999999999999998 99999999999999999999999999986532110
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.......++..|+|||++....++.++|||||||++|||+| |..||....... ..... .... ...
T Consensus 159 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~-~~~~--------~~~ 224 (261)
T cd05072 159 ----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-VMSAL-QRGY--------RMP 224 (261)
T ss_pred ----eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-HHHHH-HcCC--------CCC
Confidence 11122346678999999998889999999999999999999 999996533211 11111 1110 111
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.+..++..+.+++.+|++.+|++||+++++.+.|++
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 225 RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 223456788999999999999999999999999875
No 56
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.2e-37 Score=340.57 Aligned_cols=255 Identities=33% Similarity=0.566 Sum_probs=207.8
Q ss_pred CCCCCceeeeeCCeEEEEEEECC------CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSD------NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
+|+..+.||+|+||.||+|.... ...||+|.+.... .....+|.+|++++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 56778899999999999998643 2579999987543 3334678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCC--------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC
Q 002158 699 VYEFVPNGTLRDWLSGRTK--------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN 764 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~ 764 (958)
+|||+++++|.+++..... ..+++.++..++.|++.||+|||+.+ ++||||||+||++++++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCc
Confidence 9999999999999975421 45888999999999999999999999 999999999999999999
Q ss_pred eEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002158 765 AKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREV 843 (958)
Q Consensus 765 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~ 843 (958)
+||+|||+++.....+. ........+++.|+|||++.+..++.++|||||||++|||++ |..||...... +..
T Consensus 163 ~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~~ 236 (283)
T cd05048 163 VKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EVI 236 (283)
T ss_pred EEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHH
Confidence 99999999975432111 111223346788999999998999999999999999999998 99999753321 111
Q ss_pred HHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 844 NVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 844 ~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
... ........+..++.++.+++.+||+.||++||+++||+++|++
T Consensus 237 ~~i---------~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 237 EMI---------RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHH---------HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111 1112233456778999999999999999999999999999875
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.1e-37 Score=345.03 Aligned_cols=259 Identities=22% Similarity=0.344 Sum_probs=205.6
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.++|+..+.||+|+||.||+++++ ++..||+|.+.... ....+++.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 467888999999999999999986 68899999987642 3345679999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+. |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999997543 38899999999999999999998532 999999999999999999999999998754211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc-----C-c----
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS-----G-M---- 851 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~-----~-~---- 851 (958)
......||..|+|||++.+..++.++|||||||++|||++|+.||....... ........ . .
T Consensus 158 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 229 (331)
T cd06649 158 -------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE-LEAIFGRPVVDGEEGEPHSI 229 (331)
T ss_pred -------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHhcccccccccCCcccc
Confidence 1123468999999999999999999999999999999999999996433211 11000000 0 0
Q ss_pred -----------------------chh----hhcccCCCC-ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 852 -----------------------VFS----IIDNRMGSY-PSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 852 -----------------------~~~----~i~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
..+ ++....... ....+.++.+++.+||+.||++||+++|++++-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 230 SPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred CcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 000 000001111 123567899999999999999999999999863
No 58
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.2e-37 Score=352.50 Aligned_cols=262 Identities=25% Similarity=0.394 Sum_probs=208.5
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEG 694 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 694 (958)
..++|.+.+.||+|+||.||+|++. .+..||||++.... ....+.|.+|+++++++. ||||++++++|...+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3457788899999999999999863 13469999997543 333467999999999996 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCC----------------------------------------------------------
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRT---------------------------------------------------------- 716 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 716 (958)
..++||||+++|+|.++++...
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999999999999986431
Q ss_pred ------------------------------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec
Q 002158 717 ------------------------------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD 760 (958)
Q Consensus 717 ------------------------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~ 760 (958)
...+++.++..++.|+++||+|||+.+ |+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence 123778888999999999999999998 99999999999999
Q ss_pred CCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchh
Q 002158 761 SNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNI 839 (958)
Q Consensus 761 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~ 839 (958)
.++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSN-----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred CCCEEEEEeCCcceecccccc-----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 999999999999976532111 111122346788999999999999999999999999999997 99998653221
Q ss_pred HHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 840 VREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 840 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
......... ......+..++..+.+++.+||+.||++||++.++.+.|+++.+
T Consensus 347 ~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 347 STFYNKIKS---------GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHHHHHhc---------CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111111111 11112345567889999999999999999999999999988653
No 59
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.3e-37 Score=333.12 Aligned_cols=251 Identities=31% Similarity=0.493 Sum_probs=204.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
++|+..+.||+|+||.||+|.++++..+|+|.+.... ...++|.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 3567778999999999999999888899999887543 334678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~---- 154 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE---- 154 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCc----
Confidence 999999997543 24899999999999999999999999 9999999999999999999999999987542211
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
........++..|+|||++.+..++.++||||||+++|||++ |+.||...... ......... .....
T Consensus 155 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-~~~~~i~~~---------~~~~~ 222 (256)
T cd05114 155 --YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-EVVEMISRG---------FRLYR 222 (256)
T ss_pred --eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHCC---------CCCCC
Confidence 111122335678999999988889999999999999999999 89999654322 222211111 11112
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
+...+..+.+++.+||+.+|++||+++++++.|
T Consensus 223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 333457889999999999999999999999876
No 60
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-38 Score=332.35 Aligned_cols=257 Identities=29% Similarity=0.415 Sum_probs=202.9
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--------------cHHHHHHHHHHHHccCCCCcceEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--------------GQNEFLTEIKLLSRLHHRNLVSLL 687 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~H~niv~l~ 687 (958)
.-++|.+.+.||+|.||.|-+|+.. +++.||||++.+.... ..+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3467888899999999999999975 7999999998653211 124678999999999999999999
Q ss_pred EEEEeC--CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 688 GYCDEE--GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 688 ~~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
.+..+. +.+|||+|||..|.+...=.. ...++..++.+++.++..||+|||.+| ||||||||+|+|++++|++
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d--~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPD--KPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCC--cccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcE
Confidence 998764 579999999998877554322 222999999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCC----CCCcchhhhHHHHHHHHHhCCCCCCCCchhHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVLLELLTGMQPISHGKNIVR 841 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~ 841 (958)
||+|||.+.......+.+.. .......||+.|+|||...++. .+.+.||||+||+||-|+.|+.||.+...+.-
T Consensus 250 KIsDFGVs~~~~~~~~~~~d--~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l 327 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSD--DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL 327 (576)
T ss_pred EeeccceeeecccCCccccH--HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence 99999999876443322221 1122367999999999998743 24589999999999999999999975443322
Q ss_pred HHHHHhhcCcchhhhcccCCCCC--hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 842 EVNVARDSGMVFSIIDNRMGSYP--SECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 842 ~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
.-. ++...+ .+| ++..+.+.+||++++++||++|.+..+|..+..
T Consensus 328 ~~K----------Ivn~pL-~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 328 FDK----------IVNDPL-EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred HHH----------HhcCcc-cCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 211 111111 222 246788999999999999999999999987754
No 61
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.2e-37 Score=333.33 Aligned_cols=255 Identities=31% Similarity=0.485 Sum_probs=209.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.+|...+.||+|+||.||+|.++ .++.||+|.+... ....+++.+|++++++++|+||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 34667789999999999999976 5889999998754 334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-- 159 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-- 159 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee--
Confidence 9999999997665566899999999999999999999998 99999999999999999999999999876532110
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.......++..|+|||++.+..++.++||||||+++|||++ |..||..... ......... . ....
T Consensus 160 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~-~--------~~~~ 225 (263)
T cd05052 160 ----TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEK-G--------YRME 225 (263)
T ss_pred ----eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHC-C--------CCCC
Confidence 11112234668999999999999999999999999999998 8999865332 222111111 0 1123
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 3455678899999999999999999999999998865
No 62
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1e-37 Score=336.68 Aligned_cols=256 Identities=30% Similarity=0.498 Sum_probs=214.4
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
...+|+..+.||+|+||.||+|.+.+++.||+|.+..........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 44567788899999999999999988999999999876665667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.++++......+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 99999999998766566899999999999999999999999 9999999999999999999999999997653211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.......++..|+|||++....++.++||||||+++|||++ |+.||...... ....... .....
T Consensus 159 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~~~~---------~~~~~ 223 (261)
T cd05148 159 -----YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYDQIT---------AGYRM 223 (261)
T ss_pred -----ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHHHHH---------hCCcC
Confidence 11112346678999999998899999999999999999998 89999654321 1111111 11112
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
..+..++..+.+++.+||+.||++||+++++.+.|+.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 2345667889999999999999999999999999875
No 63
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-37 Score=345.11 Aligned_cols=240 Identities=25% Similarity=0.337 Sum_probs=197.5
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
||+|+||+||+|... +++.||+|++... .......+.+|++++++++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999986 5889999998653 233345788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccce
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTH 788 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 788 (958)
.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-------~ 148 (312)
T cd05585 81 FHHLQREG--RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-------D 148 (312)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-------C
Confidence 99997543 4899999999999999999999999 9999999999999999999999999987532111 1
Q ss_pred eeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 789 VSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 789 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........ .....++...+
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-~~~~~~~~----------~~~~~~~~~~~ 217 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-NEMYRKIL----------QEPLRFPDGFD 217 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-HHHHHHHH----------cCCCCCCCcCC
Confidence 12345699999999999999999999999999999999999999975432 22211111 11123455667
Q ss_pred HHHHHHHHHccccCCCCCCC---HHHHHHH
Q 002158 869 ERFVTLALRCCHDKPEHRPS---MSDVVRE 895 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs---~~evl~~ 895 (958)
..+.+++.+||+.||++||+ +.|++.+
T Consensus 218 ~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 218 RDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 88999999999999999985 5566543
No 64
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.7e-37 Score=342.31 Aligned_cols=260 Identities=25% Similarity=0.437 Sum_probs=207.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCc----EEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNT----TVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
..+|+..+.||+|+||+||+|++. ++. .||||+++... ....++|.+|+.+++.++||||++++|+|... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 346888899999999999999864 333 48999987543 34456799999999999999999999999865 577
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999997643 34888999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
.... ........++..|+|||++.+..++.++||||||+++|||++ |..||.+.... ........ +
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~~~~~~~-~------ 227 (316)
T cd05108 161 ADEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILEK-G------ 227 (316)
T ss_pred CCCc-----ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhC-C------
Confidence 3221 111112234678999999999999999999999999999998 99999653321 11111111 1
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
.....+..++..+.+++.+||..+|.+||++.+++..+.++.+..
T Consensus 228 --~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 228 --ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 111123345677899999999999999999999999998876443
No 65
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.3e-37 Score=347.43 Aligned_cols=242 Identities=23% Similarity=0.296 Sum_probs=200.4
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
+.||+|+||.||++... +++.||||++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999976 68999999987532 233457889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcc
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMP 786 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 786 (958)
+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------- 148 (328)
T cd05593 81 ELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------- 148 (328)
T ss_pred CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc-------
Confidence 9999996543 4899999999999999999999999 999999999999999999999999998743211
Q ss_pred ceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChH
Q 002158 787 THVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSE 866 (958)
Q Consensus 787 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 866 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... ......+|..
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-~~~~~~----------~~~~~~~p~~ 217 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFELI----------LMEDIKFPRT 217 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-HHHHHh----------ccCCccCCCC
Confidence 11122356999999999999999999999999999999999999999754321 111111 1111233555
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 867 CVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 867 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.+.++.+++.+||+.||++|| ++.|++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 677899999999999999997 89998875
No 66
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.2e-37 Score=332.96 Aligned_cols=256 Identities=29% Similarity=0.505 Sum_probs=210.1
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..++|+..+.||+|+||.||+|.+.+++.||+|.++... ...++|.+|++++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 345688889999999999999998888899999987643 3356789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.......+++..+..++.|++.|+.|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 99999999997655456899999999999999999999999 99999999999999999999999999986542110
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
........+..|+|||++.+..++.++||||||+++|||++ |+.||....... ..... ... ...
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~-~~~--------~~~ 223 (261)
T cd05068 159 -----EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-VLQQV-DQG--------YRM 223 (261)
T ss_pred -----cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHH-HcC--------CCC
Confidence 01111223467999999998899999999999999999999 999996543221 11111 111 011
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
..+..++..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 2234566889999999999999999999999999875
No 67
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.6e-37 Score=337.37 Aligned_cols=261 Identities=28% Similarity=0.511 Sum_probs=212.7
Q ss_pred CCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+|...+.||+|+||.||+|.+. ++..|++|.+........+.+.+|++++++++|+||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4666789999999999999853 3557999998876666667899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 700 YEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
|||+++++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcE
Confidence 99999999999996532 234889999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~ 844 (958)
+|+|||+++....... ........|+..|+|||++.+..++.++||||||+++|||+| |+.||....... ...
T Consensus 163 ~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~ 236 (291)
T cd05094 163 KIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VIE 236 (291)
T ss_pred EECCCCcccccCCCce-----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH
Confidence 9999999875422111 111223446788999999999999999999999999999999 999986543321 111
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
.. . .......+..++..+.+++.+||+.+|++||+++++++.|+++.+..|
T Consensus 237 ~~-~--------~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 237 CI-T--------QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred HH-h--------CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence 11 1 111122234467789999999999999999999999999999876544
No 68
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.3e-37 Score=342.11 Aligned_cols=245 Identities=25% Similarity=0.384 Sum_probs=197.1
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHH---HccCCCCcceEEEEEEeCCeEEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLL---SRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
|...+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 556789999999999999976 68999999987532 22234566676655 566899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++++|..+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 9999999999988643 4899999999999999999999999 999999999999999999999999998643211
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
. .......|++.|+|||++.+..++.++|||||||++|||++|+.||....... ...... ..
T Consensus 155 ~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~-~~~~i~----------~~ 216 (324)
T cd05589 155 G-------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE-VFDSIV----------ND 216 (324)
T ss_pred C-------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH-HHHHHH----------hC
Confidence 1 11234569999999999999999999999999999999999999997543321 111111 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
....+...+..+.+++.+||+.||.+|| ++.+++++
T Consensus 217 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 217 EVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1223455678889999999999999999 46666553
No 69
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6e-37 Score=341.47 Aligned_cols=242 Identities=22% Similarity=0.323 Sum_probs=198.3
Q ss_pred ceeeeeCCeEEEEEEEC----CCcEEEEEEeccCC----hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 631 TQVGQGGYGKVYKGILS----DNTTVAIKRAEEGS----LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+.||+|+||.||++... .++.||||+++... ......+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999852 57899999987532 22334678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.... .+.+..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (323)
T cd05584 82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-- 154 (323)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--
Confidence 99999999997543 3788889999999999999999999 9999999999999999999999999987432111
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...... .....
T Consensus 155 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-~~~~~~----------~~~~~ 218 (323)
T cd05584 155 -----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-TIDKIL----------KGKLN 218 (323)
T ss_pred -----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-HHHHHH----------cCCCC
Confidence 11223569999999999999889999999999999999999999997544321 111111 11123
Q ss_pred CChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.+...+..+.+++.+||+.+|++|| ++++++++
T Consensus 219 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 219 LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 3455667889999999999999999 78888764
No 70
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.1e-37 Score=337.56 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=205.6
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+|+..+.||+|+||+||++... +++.||||++..... .....+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3677889999999999999975 689999999865322 223457889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 999999999987554456899999999999999999999999 9999999999999999999999999987643211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
......|+..|+|||++.+..++.++||||+||++|||++|+.||......... ... ...+.....
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~------~~~~~~~~~ 222 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEV------ERRVKEDQE 222 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHH------HHHhhhccc
Confidence 112346899999999999889999999999999999999999999754321111 000 011112223
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
..+...+..+.+++.+||+.||++|| ++++++++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 223 EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 34556778899999999999999999 78888764
No 71
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.9e-37 Score=330.88 Aligned_cols=257 Identities=30% Similarity=0.478 Sum_probs=209.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.++|+..+.||+|+||+||+|.++. ...||||.++... .....+|.+|+.++++++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 3568888999999999999999752 4579999987643 3345679999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++++|.+++..... .+++.++..++.|++.|++|||+.+ |+||||||+||++++++.++|+|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 9999999999999975433 5899999999999999999999998 99999999999999999999999999987641
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ........++..|+|||.+.+..++.++||||||+++|||++ |..||........ ..... .
T Consensus 159 ~~~-----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~-~~~~~---------~ 223 (266)
T cd05033 159 SEA-----TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV-IKAVE---------D 223 (266)
T ss_pred ccc-----ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH-HHHHH---------c
Confidence 111 111112345678999999998899999999999999999998 9999965432211 11111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
......+..++..+.+++.+||+.+|++||+++|++++|+++
T Consensus 224 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 224 GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111122345677899999999999999999999999999875
No 72
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-38 Score=326.84 Aligned_cols=247 Identities=28% Similarity=0.406 Sum_probs=209.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-CCCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-SDNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+|++.+.||+|.||+|-+|+. ..|+.||||.+++... ++.-.+.+|+++|+.++||||+.++.+|+..+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 3566667899999999999985 5899999999877543 34456789999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||..+|.|+||+.+++. +++.++.+++.||..|+.|+|.++ ++|||||-+|||+|.++++||+|||++.++..
T Consensus 133 EYaS~GeLYDYiSer~~--LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~-- 205 (668)
T KOG0611|consen 133 EYASGGELYDYISERGS--LSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD-- 205 (668)
T ss_pred EecCCccHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc--
Confidence 99999999999987655 999999999999999999999999 99999999999999999999999999987632
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCC-CcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
......++|++-|.+||++.+.+|. +.+|-||+||+||-|+-|..||++. +....++.... +...
T Consensus 206 ------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-Dhk~lvrQIs~-GaYr------ 271 (668)
T KOG0611|consen 206 ------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-DHKRLVRQISR-GAYR------ 271 (668)
T ss_pred ------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-hHHHHHHHhhc-cccc------
Confidence 2344578999999999999999886 5899999999999999999999753 33333333222 2111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.++.|....-||.+|+..+|++|.|+.+|..+-
T Consensus 272 ----EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 272 ----EPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred ----CCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 223345567899999999999999999999764
No 73
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.2e-37 Score=338.10 Aligned_cols=261 Identities=30% Similarity=0.495 Sum_probs=211.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.+|...+.||+|+||+||++... ++..||+|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46778889999999999999852 345689999887665566789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCC-----------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEE
Q 002158 699 VYEFVPNGTLRDWLSGRT-----------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKV 767 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl 767 (958)
||||+++++|.+++.... ...+++.++..++.|++.||+|||+++ ++||||||+||++++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 999999999999996432 234899999999999999999999999 999999999999999999999
Q ss_pred eeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002158 768 ADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVA 846 (958)
Q Consensus 768 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~ 846 (958)
+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||....... .....
T Consensus 162 ~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~~~i 235 (288)
T cd05093 162 GDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECI 235 (288)
T ss_pred ccCCccccccCCce-----eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH
Confidence 99999875422111 111122345778999999998899999999999999999999 899986543211 11111
Q ss_pred hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 847 RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
. .+ .....+..++..+.+++.+||+.+|.+||++.++++.|+++.+..
T Consensus 236 ~-~~--------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 236 T-QG--------RVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred H-cC--------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 1 11 111223345678999999999999999999999999999987653
No 74
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3e-37 Score=345.42 Aligned_cols=261 Identities=30% Similarity=0.484 Sum_probs=206.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEe-CC
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDE-EG 694 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-~~ 694 (958)
.++|.+.+.||+|+||.||+|.+. .++.||+|+++... ....+.+..|+++++++ +|+||++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 456888899999999999999742 24789999987543 23345688999999999 89999999998865 45
Q ss_pred eEEEEEEecCCCCHHHHhccCC----------------------------------------------------------
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRT---------------------------------------------------------- 716 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 716 (958)
..+++|||+++++|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 7889999999999999986432
Q ss_pred -CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccC
Q 002158 717 -KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKG 795 (958)
Q Consensus 717 -~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~g 795 (958)
...+++..+.+++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.+...... .......+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~-----~~~~~~~~ 237 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-----VRKGDARL 237 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcch-----hhccCCCC
Confidence 125889999999999999999999998 999999999999999999999999999865322110 11122346
Q ss_pred CCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHH
Q 002158 796 TPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTL 874 (958)
Q Consensus 796 t~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~l 874 (958)
+..|+|||++.+..++.++|||||||++|||++ |..||............. ..+ .....+...+.++.++
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~l 308 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL-KEG--------TRMRAPEYATPEIYSI 308 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH-hcc--------CCCCCCccCCHHHHHH
Confidence 778999999999999999999999999999998 999996432211111111 111 1112234456789999
Q ss_pred HHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 875 ALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 875 i~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
+.+||+.+|++||++.|++++|++++.
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998875
No 75
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6e-37 Score=336.32 Aligned_cols=258 Identities=25% Similarity=0.366 Sum_probs=198.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC--CCcEEEEEEeccCCh--hcHHHHHHHHHHHHcc---CCCCcceEEEEEE-----eC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS--DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRL---HHRNLVSLLGYCD-----EE 693 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~-----~~ 693 (958)
+|...+.||+|+||+||+|.+. +++.||||++..... .....+.+|+++++.+ +||||++++++|. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 6788899999999999999873 468899998865322 2234566788777766 6999999999985 24
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
...++||||++ ++|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccce
Confidence 56899999995 69999997665556899999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc--
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM-- 851 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~-- 851 (958)
+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||................+.
T Consensus 158 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 158 RIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 229 (290)
T ss_pred EeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 764321 1123456899999999999889999999999999999999999999765443222111111000
Q ss_pred ---ch-------hhhcccC----CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 ---VF-------SIIDNRM----GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ---~~-------~~i~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ....... .......+..+.+++.+|++.||++||++.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00 0000000 00112345678899999999999999999999863
No 76
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.8e-37 Score=335.95 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=199.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|..+ +++.||+|+++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 45788899999999999999976 68899999987543 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ ++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 97 59999986543 34788999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc----------
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM---------- 851 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~---------- 851 (958)
.......|++.|+|||++.+ ..++.++||||+||++|||++|+.||................+.
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred -----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence 11123457899999999875 56889999999999999999999999754432211111100000
Q ss_pred ----chhhhcccCC-----CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 ----VFSIIDNRMG-----SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ----~~~~i~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+... ........+..+++.+|++.||.+|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000000 0011234678899999999999999999999864
No 77
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.1e-37 Score=334.99 Aligned_cols=255 Identities=29% Similarity=0.515 Sum_probs=207.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC------CcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD------NTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
..|...+.||+|+||.||+|.+.+ ++.||||.++..... ..+.|.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 456677899999999999998643 478999999765444 4568999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 698 LVYEFVPNGTLRDWLSGRT------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
+||||+++++|.+++.... ...+++.++..++.|++.|++|||+.+ ++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 9999999999999997542 234789999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~ 844 (958)
||+|||+++....... ........+++.|+|||++.+..++.++||||||+++|||++ |..||...... ....
T Consensus 162 kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~~ 235 (280)
T cd05049 162 KIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVIE 235 (280)
T ss_pred EECCcccceecccCcc-----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHH
Confidence 9999999875422111 111122345788999999999999999999999999999999 99998654322 1111
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
... .......+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 236 ~~~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 236 CIT---------QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHH---------cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 111 11122234456788999999999999999999999999875
No 78
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.5e-37 Score=359.57 Aligned_cols=252 Identities=21% Similarity=0.293 Sum_probs=206.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-C-CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-D-NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.|...+.||+|+||.||+|... + ++.||+|.+..........+.+|+++++.++||||+++++++..++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3777889999999999999865 3 6788999876655555567888999999999999999999999999999999999
Q ss_pred CCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 704 PNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 704 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
++|+|.++++.. ....+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988643 2345889999999999999999999998 99999999999999999999999999986532111
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
........||++|+|||++.+..++.++|||||||++|||++|+.||...... ...... ......
T Consensus 225 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-~~~~~~---------~~~~~~ 289 (478)
T PTZ00267 225 -----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-EIMQQV---------LYGKYD 289 (478)
T ss_pred -----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH---------HhCCCC
Confidence 11233456999999999999999999999999999999999999999754321 111111 111112
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+..++..+.+++.+||+.||++||++++++++
T Consensus 290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 2344566789999999999999999999998753
No 79
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.9e-37 Score=344.27 Aligned_cols=253 Identities=22% Similarity=0.269 Sum_probs=203.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|... +++.||+|+++... ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36788899999999999999976 68999999987542 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999997652 34899999999999999999999999 9999999999999999999999999997653211
Q ss_pred CCCCccceeeeeccCCCCccChhhhc------cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
........||+.|+|||++. ...++.++|||||||++|||++|+.||.......... ..........
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~-~i~~~~~~~~ 229 (330)
T cd05601 157 ------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYN-NIMNFQRFLK 229 (330)
T ss_pred ------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHH-HHHcCCCccC
Confidence 11223346999999999987 4567889999999999999999999997654332211 1111100000
Q ss_pred hhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ......+..+.+++.+|++ +|++||++++++++
T Consensus 230 -----~-~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 230 -----F-PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -----C-CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0 0112356778899999998 99999999999864
No 80
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.8e-37 Score=343.45 Aligned_cols=242 Identities=22% Similarity=0.288 Sum_probs=199.0
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
+.||+|+||.||++... +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999975 68999999987532 233456788999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
+|.+++.... .+++.++..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~----- 150 (325)
T cd05594 81 ELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG----- 150 (325)
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-----
Confidence 9999986543 48999999999999999999997 67 9999999999999999999999999987432111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... ......++.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-~~~~~i----------~~~~~~~p~ 217 (325)
T cd05594 151 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFELI----------LMEEIRFPR 217 (325)
T ss_pred --cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-HHHHHH----------hcCCCCCCC
Confidence 1122356999999999999999999999999999999999999999754321 111111 111122344
Q ss_pred HHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
..+.++.+++.+|++.||++|+ ++.+++++
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 218 TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 5667899999999999999996 89999865
No 81
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=309.01 Aligned_cols=267 Identities=24% Similarity=0.351 Sum_probs=213.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEE-ECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe-----CCeEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGI-LSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE-----EGEQM 697 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~~ 697 (958)
.++|.+.+.+|+|||+.||.+. ..+++.+|+|++.-...++.+..++|++..++++|||++++++++.. ..+.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4578888999999999999998 45788999999988777788889999999999999999999998743 34589
Q ss_pred EEEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 698 LVYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
++++|...|+|.+.+.... +..+++.+.++|+.++++||++||+.. +|++||||||.|||+.+++.+++.|||.++.
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccc
Confidence 9999999999999997543 346999999999999999999999986 6899999999999999999999999999986
Q ss_pred cccCCCCC--CccceeeeeccCCCCccChhhhcc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 776 APVLDDEG--TMPTHVSTIVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 776 ~~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
.+..-... ...-........|..|.|||.+.- ...+.++|||||||+||+|+-|..||+.. ..+.+
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~~~Gg 249 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------YQQGG 249 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------hhcCC
Confidence 64322211 111122334468999999999853 45678999999999999999999999621 11222
Q ss_pred cchhhhcccCCCCC--hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 851 MVFSIIDNRMGSYP--SECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 851 ~~~~~i~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
.+.-.+......+| ...++.+.+++++|++.||.+||+..+++..+.++.
T Consensus 250 SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 250 SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 22111111111111 227889999999999999999999999999988754
No 82
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3e-37 Score=336.30 Aligned_cols=257 Identities=27% Similarity=0.461 Sum_probs=206.0
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE 695 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 695 (958)
.+++|+..+.||+|+||.||+|.+. .+..||||++... ......+|.+|+.+++.++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 5667889999999999999999863 2567999998653 23345678999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCC--------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEE
Q 002158 696 QMLVYEFVPNGTLRDWLSGRT--------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKV 767 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl 767 (958)
.++||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 999999999999999996532 123678889999999999999999998 999999999999999999999
Q ss_pred eeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002158 768 ADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVA 846 (958)
Q Consensus 768 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~ 846 (958)
+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... .......
T Consensus 161 ~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~~~~~~ 234 (277)
T cd05062 161 GDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQVLRFV 234 (277)
T ss_pred CCCCCccccCCcce-----eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHH
Confidence 99999875422111 011112245778999999998899999999999999999999 7888864332 2211111
Q ss_pred hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 847 RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
. .......+..++..+.+++.+||+.+|++||++.|+++.|+
T Consensus 235 ~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 235 M---------EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred H---------cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1 11122334456778999999999999999999999999875
No 83
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.1e-36 Score=338.24 Aligned_cols=241 Identities=24% Similarity=0.354 Sum_probs=195.0
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|.+. +++.||||+++... ....+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 57899999987532 22334566777777654 899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~----- 150 (316)
T cd05592 81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE----- 150 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-----
Confidence 99999997543 4889999999999999999999999 9999999999999999999999999987532211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +......++.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-~~~~~----------i~~~~~~~~~ 217 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-ELFDS----------ILNDRPHFPR 217 (316)
T ss_pred --CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-HHHHH----------HHcCCCCCCC
Confidence 1123456999999999999999999999999999999999999999754321 11111 1112233455
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMS-DVVR 894 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 894 (958)
.++.++.+++.+||+.||++||++. ++.+
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 5677889999999999999999875 4544
No 84
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-36 Score=340.42 Aligned_cols=250 Identities=25% Similarity=0.293 Sum_probs=199.9
Q ss_pred CCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCC----hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGS----LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 696 (958)
+|+..+.||+|+||+||++... +++.||+|++.... ....+.+.+|+++++++ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4677889999999999999853 57899999986432 22345678899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++|+|.+++..+. .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 99999999999999997543 4889999999999999999999999 999999999999999999999999998754
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcCcch
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKN--IVREVNVARDSGMVF 853 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~--~~~~~~~~~~~~~~~ 853 (958)
..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ....+..
T Consensus 156 ~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~-------- 221 (332)
T cd05614 156 LSEEK------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR-------- 221 (332)
T ss_pred cccCC------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH--------
Confidence 22111 112245699999999999865 478899999999999999999999964221 1111111
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.+.......+...+..+.+++.+||+.||++|| ++++++++
T Consensus 222 -~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 222 -RILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred -HHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 011111233445677889999999999999999 77788764
No 85
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=341.17 Aligned_cols=248 Identities=30% Similarity=0.464 Sum_probs=209.4
Q ss_pred CceeeeeCCeEEEEEEEC--CCc--EEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 630 STQVGQGGYGKVYKGILS--DNT--TVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
.++||+|.||.|++|.|+ .|+ .||||.++..... ...+|++|+.+|.+++|+|++++||+..+ ....+|||+++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 457999999999999996 343 6899999887655 56789999999999999999999999987 67889999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
.|+|.+.|+...+..|-......++.|||.||.||.+++ +|||||..+|+|+-....+||+|||+.|.+...++...
T Consensus 194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv 270 (1039)
T KOG0199|consen 194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV 270 (1039)
T ss_pred cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence 999999999866677999999999999999999999999 99999999999999999999999999998765444322
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc-ccCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID-NRMGS 862 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~ 862 (958)
+. ....-.+.|+|||.+....++.++|||+|||++|||+| |+.||.+-.... .+ +.+| ..+..
T Consensus 271 m~----p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q-IL----------~~iD~~erLp 335 (1039)
T KOG0199|consen 271 MA----PQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ-IL----------KNIDAGERLP 335 (1039)
T ss_pred ec----CCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH-HH----------HhccccccCC
Confidence 22 22334567999999999999999999999999999999 899997543321 11 1222 22334
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.|+.|++.++++++.||..+|++||++..|.+.+
T Consensus 336 RPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 336 RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 5889999999999999999999999999998543
No 86
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=348.40 Aligned_cols=255 Identities=29% Similarity=0.439 Sum_probs=211.7
Q ss_pred CCCceeeeeCCeEEEEEEEC-CC----cEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 628 SSSTQVGQGGYGKVYKGILS-DN----TTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 628 ~~~~~lg~G~~g~Vy~~~~~-~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
...++||+|+||+||+|.|- +| -+||||++... ..+...++++|+-.|.+++|||++|++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 34579999999999999973 33 47899988664 4555678999999999999999999999998775 889999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|||.|+|.||++..+ .++.....+.|..|||+||.|||++. ++||||.++|||+.+-..+||.|||+++.+...+.
T Consensus 778 ~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred hcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 999999999998654 45888999999999999999999998 99999999999999999999999999998865544
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
+-. .....-.+.|||-|.+....|+.++|||||||++||++| |..|+++... .+.-...+ ++.+
T Consensus 854 ey~-----~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-~eI~dlle---------~geR 918 (1177)
T KOG1025|consen 854 EYS-----APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-EEIPDLLE---------KGER 918 (1177)
T ss_pred ccc-----ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-HHhhHHHh---------cccc
Confidence 322 122233567999999999999999999999999999999 9999975331 11111111 1222
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
...|+.|+.+++.++.+||..|++.||+++++...+.++.+.
T Consensus 919 LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 919 LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 455888999999999999999999999999999988887654
No 87
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.9e-37 Score=328.88 Aligned_cols=251 Identities=30% Similarity=0.479 Sum_probs=204.3
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+|...+.||+|+||+||+|.++++..||||.+.... ...++|.+|+.++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 466678899999999999998777789999987543 3346799999999999999999999999998899999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++..... .+++.+++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||.++......
T Consensus 84 ~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~----- 154 (256)
T cd05113 84 GCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE----- 154 (256)
T ss_pred CcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCc-----
Confidence 999999975433 5899999999999999999999999 9999999999999999999999999987542211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
........++..|+|||++.+..++.++||||||+++|||++ |..||........ ..... .......+
T Consensus 155 -~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~-~~~~~---------~~~~~~~~ 223 (256)
T cd05113 155 -YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET-VEKVS---------QGLRLYRP 223 (256)
T ss_pred -eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH-HHHHh---------cCCCCCCC
Confidence 111122346678999999998889999999999999999999 9999865432211 11111 11111123
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
...+..+.+++.+||+.+|.+||++.++++.|+
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 334678999999999999999999999998763
No 88
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.4e-36 Score=345.99 Aligned_cols=256 Identities=23% Similarity=0.286 Sum_probs=199.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36788899999999999999975 68999999986432 223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999999999997543 4888999999999999999999999 9999999999999999999999999996432111
Q ss_pred CCC---------Ccc-------------------------------ceeeeeccCCCCccChhhhccCCCCCcchhhhHH
Q 002158 781 DEG---------TMP-------------------------------THVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLG 820 (958)
Q Consensus 781 ~~~---------~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~G 820 (958)
... ... ........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 000 000 0000124699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC--hHHHHHHHHHHHHccccCCCCC---CCHHHHHHH
Q 002158 821 VVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP--SECVERFVTLALRCCHDKPEHR---PSMSDVVRE 895 (958)
Q Consensus 821 v~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 895 (958)
|++|||++|..||........ ......... . ..+| ...+.++.+++.+|+. +|.+| +++.|++++
T Consensus 236 vil~elltG~~Pf~~~~~~~~-~~~i~~~~~-------~-~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHET-YRKIINWRE-------T-LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHH-HHHHHccCC-------c-cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999999999975443221 111111000 0 0111 1245678899999997 67665 599999876
No 89
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=336.71 Aligned_cols=245 Identities=28% Similarity=0.454 Sum_probs=205.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.|...+.||.|+||.||.|++. +.+.||||++.-... ....+++.|+.+|++++|||+|.+-|+|..+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 3555678999999999999975 678999999865433 334578999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|| -|+-.|++.-. ++++.+.++..|+.+.++||+|||+++ -||||||+.|||+.+.|.|||+|||.|.+..
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~---- 177 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMA---- 177 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcC----
Confidence 99 57888888643 345899999999999999999999999 9999999999999999999999999998642
Q ss_pred CCCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
+...++|||.|||||++. .+.|+-|+||||+|++-.|+...++|+.....+...+..+.......
T Consensus 178 -------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtL----- 245 (948)
T KOG0577|consen 178 -------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL----- 245 (948)
T ss_pred -------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCC-----
Confidence 234578999999999996 46799999999999999999999999986655444433332211111
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...++.+.+.+++..|+++-|.+|||.++++.+
T Consensus 246 ----qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 246 ----QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ----CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 145788999999999999999999999988754
No 90
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.4e-36 Score=344.79 Aligned_cols=258 Identities=22% Similarity=0.303 Sum_probs=202.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||+|+||+||+|... +++.||||++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888899999999999999986 68999999987532 223456789999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 81 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999997543 4899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCCcc-------------------------------ceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhC
Q 002158 781 DEGTMP-------------------------------THVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTG 829 (958)
Q Consensus 781 ~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG 829 (958)
...... ........||+.|+|||++....++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 100000 0011124699999999999999999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 002158 830 MQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPS---MSDVVRE 895 (958)
Q Consensus 830 ~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 895 (958)
..||.......... ........... ......+..+.+++.+|+. +|.+|++ ++|++++
T Consensus 236 ~~Pf~~~~~~~~~~-~i~~~~~~~~~------~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 236 YPPFCSDNPQETYR-KIINWKETLQF------PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCHHHHHH-HHHcCCCccCC------CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99997654322211 11110000000 0011345678899999996 9999997 8888875
No 91
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-36 Score=339.81 Aligned_cols=258 Identities=24% Similarity=0.376 Sum_probs=203.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.++|+..+.||+|+||.||+|.++ ++..||+|.+.... ......+.+|++++++++|+||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 467888999999999999999987 68889999887642 3334678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+|||+++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (333)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-
Confidence 999999999997543 388899999999999999999975 5 999999999999999999999999998754211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH-hhcCc--------
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA-RDSGM-------- 851 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~-~~~~~-------- 851 (958)
......|+..|+|||++.+..++.++|||||||++|||++|+.||............. ...+.
T Consensus 158 --------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (333)
T cd06650 158 --------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSP 229 (333)
T ss_pred --------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCc
Confidence 1123468999999999998889999999999999999999999997533211100000 00000
Q ss_pred ---------------------chh----hhcccCCCCC-hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 ---------------------VFS----IIDNRMGSYP-SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ---------------------~~~----~i~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... ++.......+ ...+.++.+++.+||+.||++||+++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 230 RPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 000 0000001111 1235678999999999999999999999875
No 92
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.4e-37 Score=343.93 Aligned_cols=260 Identities=24% Similarity=0.337 Sum_probs=197.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC-----CeEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE-----GEQM 697 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~ 697 (958)
+|+..+.||+|+||.||+|+.. +++.||||++... ......++.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4677889999999999999976 6899999998743 223345788999999999999999999988543 2479
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||++ ++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999994 79999986543 4899999999999999999999999 9999999999999999999999999997542
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC-----
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG----- 850 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~----- 850 (958)
..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||................+
T Consensus 155 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 155 NDTPT----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred cccCc----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 21111 111233569999999999876 6788999999999999999999999975442211100000000
Q ss_pred -----------cchhhhcccCC-C---CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 851 -----------MVFSIIDNRMG-S---YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 851 -----------~~~~~i~~~~~-~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+..... . .....+..+.+++.+||+.||++||+++|++++
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000000 0 001234667899999999999999999999975
No 93
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-37 Score=337.88 Aligned_cols=251 Identities=27% Similarity=0.426 Sum_probs=215.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--cHHHHHHHHHHHHccCCCCcceEEEEEEeCCe-EEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE-QMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lV~ 700 (958)
++|...+++|+|+||.++..+++ ++..+++|.+...... ..+....|+.++++++|||||.+.+.+..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 45777889999999999999876 6789999988765333 34467899999999999999999999999888 99999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
+||+||++.+.+....+..++++++.+|+.|++.|+.|||+.. |+|||||+.||+++.++.|||+|||+|+.+....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998877778999999999999999999999888 9999999999999999999999999999764322
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.....+.||+.||.||.+.+.+|..|+||||+||++|||++-+++|... +....+.. +.....
T Consensus 161 -------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-~m~~Li~k---------i~~~~~ 223 (426)
T KOG0589|consen 161 -------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-NMSELILK---------INRGLY 223 (426)
T ss_pred -------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-chHHHHHH---------HhhccC
Confidence 1234578999999999999999999999999999999999999999643 33332222 222223
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...|.....++..++..|++.+|+.||++.+++.+
T Consensus 224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 45577888999999999999999999999999976
No 94
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-36 Score=332.84 Aligned_cols=256 Identities=30% Similarity=0.522 Sum_probs=205.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-----CCCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-----SDNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
..|+..+.||+|+||+||+|.+ .++..||+|.+.... .....+|.+|++++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3566778999999999999985 246789999987543 3344678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCC---------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC
Q 002158 699 VYEFVPNGTLRDWLSGRT---------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL 763 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~ 763 (958)
||||+++++|.+++.... ...+++.+++.++.|++.||+|||+++ ++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 999999999999985321 234788999999999999999999999 99999999999999999
Q ss_pred CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHH
Q 002158 764 NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVRE 842 (958)
Q Consensus 764 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~ 842 (958)
.+||+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++ |..||..... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05090 162 HVKISDLGLSREIYSADY-----YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEV 235 (283)
T ss_pred cEEeccccccccccCCcc-----eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999976432111 111223346778999999988889999999999999999999 9989864332 111
Q ss_pred HHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 843 VNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 843 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
...... . .....+..++..+.+++.+||+.||++||++.++.++|.+
T Consensus 236 ~~~~~~-~--------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 IEMVRK-R--------QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHc-C--------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111 1 1112344567889999999999999999999999998764
No 95
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.6e-36 Score=327.66 Aligned_cols=255 Identities=32% Similarity=0.493 Sum_probs=207.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
.+|...+.||+|+||.||+|.++++..||+|++..... ..++|.+|++++++++|+||+++++++.. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 46788899999999999999987777899999875332 34578999999999999999999998754 56899999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+|+|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||++++++.++|+|||.++.......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~--- 157 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--- 157 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc---
Confidence 999999997654455899999999999999999999998 99999999999999999999999999976532211
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.......++..|+|||+..+..++.++||||||+++|||++ |..||....... ....... ......
T Consensus 158 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-~~~~~~~---------~~~~~~ 224 (262)
T cd05071 158 ---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVER---------GYRMPC 224 (262)
T ss_pred ---ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-HHHHHhc---------CCCCCC
Confidence 11112346778999999998899999999999999999999 888886543221 1111110 111122
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
+..++..+.+++.+|++.+|++||+++++.+.|++..
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 225 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 4456788999999999999999999999999998753
No 96
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=338.64 Aligned_cols=244 Identities=29% Similarity=0.433 Sum_probs=206.5
Q ss_pred eeeeeCCeEEEEEEECC-CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHHH
Q 002158 632 QVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLRD 710 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~ 710 (958)
+||+|.||+||.|++.+ ...+|||-+..........+.+|+..-++++|.|||+++|.|..+++.-+.||-+|||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 79999999999999764 56789999987766666778899999999999999999999999999999999999999999
Q ss_pred HhccCCCCCc--hHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-CCCCeEEeeeeeecccccCCCCCCccc
Q 002158 711 WLSGRTKENL--NFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD-SNLNAKVADFGLSRLAPVLDDEGTMPT 787 (958)
Q Consensus 711 ~l~~~~~~~l--~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~ 787 (958)
+|+.+.+. + .+.+.-.+..||++||.|||+.. |||||||-+||||+ -.|.+||+|||.++.+... .
T Consensus 662 LLrskWGP-lKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-------n 730 (1226)
T KOG4279|consen 662 LLRSKWGP-LKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-------N 730 (1226)
T ss_pred HHHhccCC-CccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccC-------C
Confidence 99877643 4 67788889999999999999999 99999999999996 5799999999999876332 2
Q ss_pred eeeeeccCCCCccChhhhccC--CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 788 HVSTIVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 788 ~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
..+..+.||.-|||||++..+ .|..++|||||||++.||.||++||....+....+- +.+ +-+.-+.+|.
T Consensus 731 P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF---kVG-----myKvHP~iPe 802 (1226)
T KOG4279|consen 731 PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF---KVG-----MYKVHPPIPE 802 (1226)
T ss_pred ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh---hhc-----ceecCCCCcH
Confidence 234567899999999999766 488899999999999999999999975443322211 011 1122356788
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
+...+..++|.+|+.+||.+||++.++++
T Consensus 803 elsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 99999999999999999999999999986
No 97
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.2e-36 Score=346.99 Aligned_cols=258 Identities=21% Similarity=0.310 Sum_probs=200.6
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.|...+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5777889999999999999975 68899999987532 2334568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999999997543 4888999999999999999999999 99999999999999999999999999864321100
Q ss_pred CCC----------------------------------------ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHH
Q 002158 782 EGT----------------------------------------MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 821 (958)
Q Consensus 782 ~~~----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv 821 (958)
... ..........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 000 0000112357999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHH--ccccCCCCCCCHHHHHHH
Q 002158 822 VLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALR--CCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 822 ~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~evl~~ 895 (958)
++|||++|+.||.................. .. . ......+.++.+++.+ |+..+|..||+++|++++
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~-----~-~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQLKVINWENT-LH-----I-PPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHHHHHHccccc-cC-----C-CCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999999999765432222111110000 00 0 0111345677788877 566677779999999975
No 98
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.9e-36 Score=326.67 Aligned_cols=253 Identities=30% Similarity=0.488 Sum_probs=206.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
++|+..+.||+|+||.||+|.++++..||+|.+..... ..+.|.+|+.++++++|+|++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46777889999999999999988888999999876433 3457999999999999999999999885 456899999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.++++......+++.++..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc---
Confidence 999999998655556899999999999999999999999 99999999999999999999999999976532111
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.......++..|+|||++.+..++.++||||||+++|||++ |..||.+.... ....... .......
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~~~~---------~~~~~~~ 224 (260)
T cd05070 158 ---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLEQVE---------RGYRMPC 224 (260)
T ss_pred ---ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHH---------cCCCCCC
Confidence 11112235678999999988899999999999999999999 88898654322 1111111 1111223
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
+...+..+.+++.+|+..+|++||+++++.+.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 44567789999999999999999999999998875
No 99
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.9e-36 Score=340.46 Aligned_cols=259 Identities=22% Similarity=0.308 Sum_probs=198.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||+|+||+||+|... +++.||||++.... ......+.+|+.++.+++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888899999999999999976 58899999987532 222356788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 9999999999997543 4899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCC----------------------------ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCC
Q 002158 781 DEGT----------------------------MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQP 832 (958)
Q Consensus 781 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P 832 (958)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0000 000011245799999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccc--cCCCCCCCHHHHHHH
Q 002158 833 ISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCH--DKPEHRPSMSDVVRE 895 (958)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~~ 895 (958)
|.......... .......... .+. ......++.+++.+++. .++..||+++|++++
T Consensus 236 f~~~~~~~~~~-~i~~~~~~~~-----~p~-~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 236 FCSETPQETYK-KVMNWKETLI-----FPP-EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCHHHHHH-HHHcCcCccc-----CCC-cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 97544322211 1111000000 000 01134566677776433 344467999999976
No 100
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.2e-37 Score=342.14 Aligned_cols=236 Identities=24% Similarity=0.344 Sum_probs=193.9
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|..+ +++.||||++.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999986 58899999987532 23345677899988877 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~------ 149 (320)
T cd05590 81 GDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN------ 149 (320)
T ss_pred chHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC------
Confidence 99999997543 4899999999999999999999999 999999999999999999999999998743211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... ......+.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-~~~~~i~----------~~~~~~~~ 217 (320)
T cd05590 150 -GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-DLFEAIL----------NDEVVYPT 217 (320)
T ss_pred -CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-HHHHHHh----------cCCCCCCC
Confidence 11123456999999999999999999999999999999999999999754422 1111111 11122344
Q ss_pred HHHHHHHHHHHHccccCCCCCCCH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSM 889 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~ 889 (958)
..+.++.+++.+|++.||++||++
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 218 WLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCC
Confidence 566788999999999999999998
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-37 Score=348.57 Aligned_cols=253 Identities=23% Similarity=0.298 Sum_probs=197.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.+|...+.||+|+||.||+|.+. .++.||+|.... ..+.+|++++++++||||+++++++......++|||++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 56888999999999999999975 688999997542 34678999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
+++|.+++.... .+++.+++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 166 -~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--- 236 (391)
T PHA03212 166 -KTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--- 236 (391)
T ss_pred -CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc---
Confidence 479999986543 4889999999999999999999999 9999999999999999999999999997532211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh------HHHHHHH-hhcCc-----
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI------VREVNVA-RDSGM----- 851 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~------~~~~~~~-~~~~~----- 851 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... ...+.
T Consensus 237 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 237 ---ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred ---ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 11223457999999999999999999999999999999999999887542210 0011000 00000
Q ss_pred -------chhhh----c---ccCCCC-----ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 -------VFSII----D---NRMGSY-----PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 -------~~~~i----~---~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..... . ...... ....+.++.+++.+||+.||++|||++|++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 0 000000 11346688999999999999999999999974
No 102
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.4e-36 Score=326.94 Aligned_cols=250 Identities=30% Similarity=0.479 Sum_probs=203.5
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+|+..+.||+|+||.||+|.++++..+|+|.+.... ....+|.+|++++++++|+||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 466778999999999999998877889999986533 2345788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
++|.+++..... .+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 84 ~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~----- 154 (256)
T cd05059 84 GCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ----- 154 (256)
T ss_pred CCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccc-----
Confidence 999999975433 5899999999999999999999999 9999999999999999999999999987542111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ....... . .....+
T Consensus 155 -~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~-~--------~~~~~~ 223 (256)
T cd05059 155 -YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-VVESVSA-G--------YRLYRP 223 (256)
T ss_pred -ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-HHHHHHc-C--------CcCCCC
Confidence 001111224567999999999999999999999999999999 899986543321 1111111 1 011223
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
..++..+.+++.+||..+|++||++.|+++.|
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 45678899999999999999999999999876
No 103
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.6e-36 Score=336.76 Aligned_cols=241 Identities=22% Similarity=0.335 Sum_probs=195.6
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||.||+|.++ +|+.||+|+++... ......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999986 68899999987532 12344567788888765 899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 149 (316)
T cd05620 81 GDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG------ 149 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC------
Confidence 99999997543 4889999999999999999999999 999999999999999999999999998743111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...... .......+.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-~~~~~~----------~~~~~~~~~ 217 (316)
T cd05620 150 -DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-ELFESI----------RVDTPHYPR 217 (316)
T ss_pred -CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHH----------HhCCCCCCC
Confidence 11223456999999999999999999999999999999999999999754321 111111 111123344
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMS-DVVR 894 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 894 (958)
....++.+++.+||+.||++||++. ++.+
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 218 WITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 4667889999999999999999985 5553
No 104
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.8e-36 Score=330.11 Aligned_cols=248 Identities=22% Similarity=0.343 Sum_probs=197.6
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
||+|+||.||++..+ +|+.||+|++..... ...+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999976 689999999864321 2234466799999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccce
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTH 788 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 788 (958)
.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++...... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--------~ 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--------K 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCC--------c
Confidence 99987655556899999999999999999999999 999999999999999999999999998754321 1
Q ss_pred eeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 789 VSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 789 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
......|+..|+|||++.+..++.++||||+||++|||++|+.||.............. ..............+
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 223 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR------RTLEDEVKFEHQNFT 223 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH------HhhccccccccccCC
Confidence 12234689999999999998999999999999999999999999965322111100000 001111111122456
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
.++.+++.+||+.||++||+++|+++.+.
T Consensus 224 ~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 224 EESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred HHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 77899999999999999999988765433
No 105
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=9.6e-37 Score=339.59 Aligned_cols=242 Identities=23% Similarity=0.336 Sum_probs=197.4
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|+++ +++.||||++.... ....+.+..|.++++.+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999986 57899999987532 23345677899999876 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~----- 150 (321)
T cd05591 81 GDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG----- 150 (321)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC-----
Confidence 99999996543 4889999999999999999999999 9999999999999999999999999987432111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... .....|.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~-~~~~i~~----------~~~~~p~ 217 (321)
T cd05591 151 --VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD-LFESILH----------DDVLYPV 217 (321)
T ss_pred --ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH-HHHHHHc----------CCCCCCC
Confidence 11234569999999999999999999999999999999999999997544322 1111111 1112344
Q ss_pred HHHHHHHHHHHHccccCCCCCC-------CHHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRP-------SMSDVVRE 895 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RP-------s~~evl~~ 895 (958)
..+.++.+++.+|++.||++|| ++++++++
T Consensus 218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 4567889999999999999999 77777754
No 106
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-36 Score=334.40 Aligned_cols=260 Identities=24% Similarity=0.344 Sum_probs=200.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.++|...+.||+|+||+||+|..+ +++.||||++..... .....+.+|+++++.++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 357888999999999999999986 688999999875432 223467889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|++ ++|.+++.... ..++...+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 995 68888886543 34888999999999999999999999 9999999999999999999999999987532111
Q ss_pred CCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh-cCcch------
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD-SGMVF------ 853 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~-~~~~~------ 853 (958)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..+.......... .+...
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 158 ------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPG 231 (303)
T ss_pred ------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccc
Confidence 11123458899999999875 45788999999999999999999999765443332221110 00000
Q ss_pred --h---hhcccCC-CCCh---------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 --S---IIDNRMG-SYPS---------ECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 --~---~i~~~~~-~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ....... ..+. ..+..+.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0 0000000 0010 123567899999999999999999999864
No 107
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.2e-36 Score=338.96 Aligned_cols=237 Identities=26% Similarity=0.337 Sum_probs=190.8
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHH-HHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIK-LLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||.||+|++. +++.||+|++.... .....++.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999986 68899999986532 122344555654 67889999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP------ 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC------
Confidence 9999988654 34888899999999999999999999 999999999999999999999999998742111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........ ......+.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~----------~~~~~~~~ 217 (321)
T cd05603 150 -EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-SQMYDNIL----------HKPLQLPG 217 (321)
T ss_pred -CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-HHHHHHHh----------cCCCCCCC
Confidence 1112345699999999999999999999999999999999999999975432 12111111 11122344
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMS 890 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~ 890 (958)
..+..+.+++.+|++.||++||+..
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 5567889999999999999999764
No 108
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.1e-36 Score=338.77 Aligned_cols=238 Identities=24% Similarity=0.303 Sum_probs=195.8
Q ss_pred ceeeeeCCeEEEEEEE----CCCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 631 TQVGQGGYGKVYKGIL----SDNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
+.||+|+||.||++.. .+|+.||+|++..... .....+..|++++++++||||+++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 3578999999875322 234467889999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---- 152 (318)
T cd05582 82 GGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---- 152 (318)
T ss_pred CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC----
Confidence 999999996543 4899999999999999999999999 9999999999999999999999999987542211
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... ......+
T Consensus 153 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~~i~----------~~~~~~p 218 (318)
T cd05582 153 ---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET-MTMIL----------KAKLGMP 218 (318)
T ss_pred ---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH-HHHHH----------cCCCCCC
Confidence 112345699999999999988899999999999999999999999975433211 11111 1112334
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSD 891 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~e 891 (958)
...+..+.+++.+||+.||++||++.+
T Consensus 219 ~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 556778899999999999999999554
No 109
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.7e-36 Score=329.10 Aligned_cols=259 Identities=26% Similarity=0.398 Sum_probs=203.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCc----EEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNT----TVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.+|...+.||+|+||+||+|.+. +++ .|++|.+.... .....++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 35667789999999999999975 344 47788876432 2234568889999999999999999999864 46789
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
++||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999997543 34899999999999999999999998 99999999999999999999999999986532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ........++..|+|||++.+..++.++||||||+++|||++ |..||.+..... ... ....+.
T Consensus 162 ~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~~-~~~~~~------ 228 (279)
T cd05111 162 DDK-----KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-VPD-LLEKGE------ 228 (279)
T ss_pred CCc-----ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HHH-HHHCCC------
Confidence 211 111223457789999999998999999999999999999998 999996543211 111 111111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
....+..++..+..++.+||..+|++||++.|+++.|..+.+..
T Consensus 229 --~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 229 --RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 11123335567889999999999999999999999998877543
No 110
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.3e-36 Score=326.15 Aligned_cols=257 Identities=24% Similarity=0.365 Sum_probs=208.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||+|+||.||+|+.. +++.||||.+... .......|.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46888899999999999999975 7899999987542 2333457899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 701 EFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 701 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||+++++|.+++... ....+++..+..++.|+++||+|||+++ ++||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988532 2344788999999999999999999999 99999999999999999999999999876532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh-HHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI-VREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~i~ 857 (958)
... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ...........
T Consensus 159 ~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~------- 224 (267)
T cd08228 159 KTT-------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD------- 224 (267)
T ss_pred hhH-------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC-------
Confidence 111 112345888999999999888999999999999999999999999654321 11111111100
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.....+...+..+.+++.+||+.+|++||++++|++.++++
T Consensus 225 -~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 225 -YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 01112335667899999999999999999999999999875
No 111
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.2e-36 Score=326.29 Aligned_cols=254 Identities=30% Similarity=0.483 Sum_probs=208.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.+.|...++||+|+||.||+|..++++.||+|.+..... ...+|.+|++++++++|+|++++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 456788899999999999999988899999999876433 3467899999999999999999999874 45789999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.......+++.++..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc--
Confidence 9999999997665566899999999999999999999998 99999999999999999999999999876532111
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.......++..|+|||++....++.++||||||+++|||++ |+.||...... ........ + ....
T Consensus 158 ----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~-~--------~~~~ 223 (260)
T cd05067 158 ----TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-EVIQNLER-G--------YRMP 223 (260)
T ss_pred ----ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-HHHHHHHc-C--------CCCC
Confidence 11122346778999999998889999999999999999999 99999754322 11111111 1 1112
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.+...+.++.+++.+||+.+|++||+++++.+.|+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 234456789999999999999999999999998875
No 112
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7e-37 Score=341.70 Aligned_cols=251 Identities=21% Similarity=0.307 Sum_probs=198.1
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|.++ +++.||||+++... ....+.+.+|..+++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999976 68899999997532 22345688999999998 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------ 149 (329)
T cd05588 81 GDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP------ 149 (329)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC------
Confidence 99999986543 4899999999999999999999999 999999999999999999999999998742111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ........+.+.......|.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~ 226 (329)
T cd05588 150 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD--QNTEDYLFQVILEKQIRIPR 226 (329)
T ss_pred -CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccc--ccchHHHHHHHHcCCCCCCC
Confidence 111234569999999999999999999999999999999999999996311000000 00000011112222223455
Q ss_pred HHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPS------MSDVVRE 895 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs------~~evl~~ 895 (958)
.++..+.+++.+|++.||.+||+ +++++++
T Consensus 227 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 227 SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 66778999999999999999997 6677654
No 113
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=322.82 Aligned_cols=254 Identities=23% Similarity=0.344 Sum_probs=197.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC-----eEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG-----EQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lV 699 (958)
.|...+++|.|+||.||+|... .++.||||+.-.+.... .+|+++|+.+.|||||++.-++.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4555689999999999999975 57999999886543322 37999999999999999999885432 34589
Q ss_pred EEecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeeeeccc
Q 002158 700 YEFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGLSRLA 776 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla~~~ 776 (958)
||||| .+|+++++.. .+..++...+.-+..|+.+||+|||+.+ |+||||||.|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 99996 5999999742 2344788888899999999999999999 9999999999999987 99999999999987
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc---
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV--- 852 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~--- 852 (958)
..... ......|..|+|||.+.+. .|+.+.||||.||++.||+-|++-|.+.....+.+....--|..
T Consensus 177 ~~~ep--------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e 248 (364)
T KOG0658|consen 177 VKGEP--------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRE 248 (364)
T ss_pred ccCCC--------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHH
Confidence 54332 2334467889999999876 69999999999999999999999888765544443332221111
Q ss_pred --------------hhhhcccCCC-CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 --------------FSIIDNRMGS-YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 --------------~~~i~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.++....+.. +....+.+..+++.+++..+|.+|.++.|++.+
T Consensus 249 ~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 249 DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0000111111 334567889999999999999999999999864
No 114
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=7.2e-37 Score=341.07 Aligned_cols=241 Identities=22% Similarity=0.320 Sum_probs=197.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCC-CCcceEEEEEEeCCeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHH-RNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lV~ 700 (958)
+|+..+.||+|+||.||+|..+ +++.||||++.... ....+.+..|.++++.++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4677889999999999999976 57899999987532 2334568889999999976 56888999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 9999999999997543 3889999999999999999999999 999999999999999999999999998643111
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........||+.|+|||++.+..++.++||||+||++|||++|+.||........ .... ....
T Consensus 155 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-~~~i----------~~~~ 217 (324)
T cd05587 155 ------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-FQSI----------MEHN 217 (324)
T ss_pred ------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-HHHH----------HcCC
Confidence 1122345699999999999999999999999999999999999999975443211 1111 1112
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSM 889 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 889 (958)
..++...+..+.+++.+|++.||.+|++.
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 23345567788999999999999999986
No 115
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.4e-36 Score=333.85 Aligned_cols=261 Identities=28% Similarity=0.525 Sum_probs=209.9
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEECC------CcEEEEEEeccC-ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILSD------NTTVAIKRAEEG-SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE 693 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 693 (958)
...++|+..+.||+|+||.||+|.+.+ ...||+|.+... ......++.+|+++++++ +|+||+++++++..+
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 345567888999999999999998642 367999998754 233445788999999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccC--------------CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGR--------------TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
+..++||||+++|+|.++++.. ....+++..+++++.|++.||+|||+.+ |+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence 9999999999999999999642 2345899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
++++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 240 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDY-----YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 240 (293)
T ss_pred cCCCeEEeCccccccccccccc-----eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH
Confidence 9999999999999986532211 111122235678999999988899999999999999999998 9999864332
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
.+....... ......+..++..+.+++.+||+.+|++|||++|+++.|++++
T Consensus 241 -~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 -EELFKLLKE---------GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -HHHHHHHHc---------CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 121111111 1112234456778999999999999999999999999998875
No 116
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.5e-36 Score=342.67 Aligned_cols=258 Identities=22% Similarity=0.304 Sum_probs=206.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|... +++.||||++.... ......+.+|+++++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36788899999999999999986 68999999987532 133456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999765 34899999999999999999999998 9999999999999999999999999997653322
Q ss_pred CC----------------------CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch
Q 002158 781 DE----------------------GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN 838 (958)
Q Consensus 781 ~~----------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~ 838 (958)
.. ............||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 00 00001122345699999999999999999999999999999999999999976553
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPS-MSDVVRE 895 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 895 (958)
........ ...... ..+. ...++..+.+++.+|+. ||.+||+ +++++++
T Consensus 236 ~~~~~~i~-~~~~~~-----~~p~-~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 QETYNKII-NWKESL-----RFPP-DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHHHh-ccCCcc-----cCCC-CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 22221111 100000 0111 11256788999999997 9999999 9999975
No 117
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.7e-36 Score=332.93 Aligned_cols=260 Identities=25% Similarity=0.409 Sum_probs=208.9
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEG 694 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 694 (958)
..++|...+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|+++++++ +|+||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3456888899999999999999752 34579999987643 33346789999999999 7999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++||||+++|+|.++++......+++.++..++.|++.||+|||+.+ |+|+||||+||+++.++.++++|||+++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence 9999999999999999997655445899999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcch
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
....... ........++..|+|||++.+..++.++|||||||++|||++ |..||............. ..+.
T Consensus 190 ~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~-~~~~-- 261 (302)
T cd05055 190 DIMNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI-KEGY-- 261 (302)
T ss_pred cccCCCc-----eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH-HcCC--
Confidence 5532211 111122346788999999999999999999999999999998 999986543221111111 1110
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
....+...+..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 262 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 ------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1112334467899999999999999999999999999875
No 118
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.8e-37 Score=344.53 Aligned_cols=246 Identities=28% Similarity=0.393 Sum_probs=194.0
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
|+..+.||+|+||+||+|++. +++.||||++.... ....+.+.+|+++++.++|+||+++++++...+..++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 344578999999999999976 68999999986543 2334678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+|+|.+.. ...+..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 156 ~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---- 222 (353)
T PLN00034 156 GGSLEGTH------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---- 222 (353)
T ss_pred CCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc----
Confidence 99986543 2456778899999999999999999 9999999999999999999999999998653211
Q ss_pred ccceeeeeccCCCCccChhhhcc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||...... .+..... .+....
T Consensus 223 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-~~~~~~~------~~~~~~ 292 (353)
T PLN00034 223 ---DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-DWASLMC------AICMSQ 292 (353)
T ss_pred ---ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-cHHHHHH------HHhccC
Confidence 11223469999999998743 22346899999999999999999999632211 1100000 000111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+..++.++.+++.+||+.||++||+++|++++
T Consensus 293 ~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122344567889999999999999999999999974
No 119
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.7e-36 Score=330.86 Aligned_cols=246 Identities=23% Similarity=0.346 Sum_probs=197.3
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
||+|+||+||++.+. +++.||+|++..... ...+.+..|+++++.++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999976 688999999865322 2235678899999999999999999999999999999999999999
Q ss_pred HHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcc
Q 002158 709 RDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMP 786 (958)
Q Consensus 709 ~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 786 (958)
.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||+++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----- 152 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS----- 152 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-----
Confidence 9888542 2345899999999999999999999999 99999999999999999999999999875432111
Q ss_pred ceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChH
Q 002158 787 THVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSE 866 (958)
Q Consensus 787 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 866 (958)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.............. .+.......+..
T Consensus 153 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 223 (280)
T cd05608 153 --KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ-------RILNDSVTYPDK 223 (280)
T ss_pred --cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH-------hhcccCCCCccc
Confidence 12235689999999999999999999999999999999999999975332111100000 000111223455
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 867 CVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 867 ~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.+..+.+++.+||+.||++|| ++++++++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 678899999999999999999 66677653
No 120
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.6e-37 Score=341.75 Aligned_cols=251 Identities=22% Similarity=0.325 Sum_probs=197.5
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|..+ +++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 6889999998753 223345678899988877 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~----- 150 (329)
T cd05618 81 GDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG----- 150 (329)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-----
Confidence 99999986543 4899999999999999999999999 9999999999999999999999999987432111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ........+.+.......|.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~--~~~~~~~~~~i~~~~~~~p~ 226 (329)
T cd05618 151 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD--QNTEDYLFQVILEKQIRIPR 226 (329)
T ss_pred --CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcc--cccHHHHHHHHhcCCCCCCC
Confidence 11234569999999999999999999999999999999999999995211000000 00000011111222233456
Q ss_pred HHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPS------MSDVVRE 895 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs------~~evl~~ 895 (958)
..+..+.+++.+||+.||++||+ +++++++
T Consensus 227 ~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 227 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 66788899999999999999998 4676654
No 121
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.7e-36 Score=329.83 Aligned_cols=265 Identities=28% Similarity=0.461 Sum_probs=205.1
Q ss_pred CCCCCceeeeeCCeEEEEEEE-----CCCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGIL-----SDNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQM 697 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 697 (958)
+|...+.||+|+||+||++.. .+++.||+|.+.... ......|.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 347788999999999988653 357889999987643 23456788999999999999999999998653 4689
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++++|.+++... .+++.++..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 85 lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999999754 3899999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh----cCcch
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD----SGMVF 853 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~----~~~~~ 853 (958)
..... ........++..|+|||.+.+..++.++||||||+++|||++|..|+............... .....
T Consensus 159 ~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05080 159 EGHEY----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI 234 (283)
T ss_pred Ccchh----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhh
Confidence 32111 01111223566799999999888999999999999999999999998643321111110000 00011
Q ss_pred hhhcccC-CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 854 SIIDNRM-GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 854 ~~i~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
+.++... ...+..++..+.+++.+||+.+|++||+++++++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111111 2234556789999999999999999999999999998864
No 122
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.2e-36 Score=325.18 Aligned_cols=250 Identities=26% Similarity=0.430 Sum_probs=208.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|++|.||+|.++ +++.|++|.+... .....+++.+|++++++++|||++++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3667789999999999999986 6899999988643 344566799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.++++......+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 99999999998765556899999999999999999999998 9999999999999999999999999987653211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.......|++.|+|||+..+..++.++||||||+++|||++|+.||....... .... ........
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~---------~~~~~~~~ 220 (256)
T cd08529 156 -----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-LILK---------IIRGVFPP 220 (256)
T ss_pred -----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHH---------HHcCCCCC
Confidence 11123458899999999999999999999999999999999999997544211 1111 11122223
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+...+..+.+++.+||+.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 344567889999999999999999999999874
No 123
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.6e-37 Score=358.20 Aligned_cols=256 Identities=24% Similarity=0.328 Sum_probs=207.9
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC----
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG---- 694 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 694 (958)
....+|...+.||+|+||+||+|.+. +++.||||++... .......+.+|+.++..++|+|++++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34568889999999999999999865 7899999998654 2344567889999999999999999988765432
Q ss_pred ----eEEEEEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEe
Q 002158 695 ----EQMLVYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 695 ----~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
..++||||+++|+|.++++.+. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEE
Confidence 3689999999999999997532 345899999999999999999999998 9999999999999999999999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~ 848 (958)
|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+...
T Consensus 186 DFGls~~~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-~~~~~~~-- 257 (496)
T PTZ00283 186 DFGFSKMYAATVS-----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-EEVMHKT-- 257 (496)
T ss_pred ecccCeecccccc-----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHH--
Confidence 9999986532211 1122345699999999999999999999999999999999999999975432 2221111
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........+..++.++.+++.+||+.||++||++.+++++
T Consensus 258 -------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 -------LAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -------hcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1112223455677889999999999999999999999864
No 124
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.6e-36 Score=330.13 Aligned_cols=258 Identities=29% Similarity=0.511 Sum_probs=207.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
+|+..+.||+|+||.||+|... ....||+|.+.... .....++.+|+++++.++||||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 3667789999999999999863 23578999887543 3345678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCC----------------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccc
Q 002158 699 VYEFVPNGTLRDWLSGRT----------------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASN 756 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~N 756 (958)
||||+++++|.+++.... ...+++.+++.++.|++.||+|||+.+ ++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999986421 134789999999999999999999998 9999999999
Q ss_pred eEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCC
Q 002158 757 ILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISH 835 (958)
Q Consensus 757 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~ 835 (958)
|++++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||..
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999998754322111 11122346678999999998899999999999999999999 9999964
Q ss_pred CchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 836 GKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
... ......... . .....+..++..+.+++.+||+.+|++||+++++++.|++++.
T Consensus 233 ~~~-~~~~~~~~~-~--------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 233 IAP-ERLFNLLKT-G--------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCH-HHHHHHHhC-C--------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 332 221211111 1 0112244566789999999999999999999999999999874
No 125
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2e-36 Score=344.44 Aligned_cols=263 Identities=25% Similarity=0.410 Sum_probs=208.2
Q ss_pred HHHHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccC-CCCcceEEEEEEe
Q 002158 621 AMATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLH-HRNLVSLLGYCDE 692 (958)
Q Consensus 621 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 692 (958)
....++|...+.||+|+||.||+|++. .++.||||+++.... ...+.+.+|++++.++. ||||++++++|..
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 334456777889999999999999864 246899999976432 23457899999999997 9999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCC-------------------------------------------------------
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSGRTK------------------------------------------------------- 717 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~~~~------------------------------------------------------- 717 (958)
.+..++||||+++|+|.++++....
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 9999999999999999999964321
Q ss_pred -----------------------------------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccc
Q 002158 718 -----------------------------------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASN 756 (958)
Q Consensus 718 -----------------------------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~N 756 (958)
..+++..+..++.|++.||+|||+.+ |+||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcce
Confidence 23677888999999999999999988 9999999999
Q ss_pred eEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCC
Q 002158 757 ILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISH 835 (958)
Q Consensus 757 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~ 835 (958)
||+++++.+||+|||+++........ .......++..|+|||.+....++.++||||||+++|||++ |..||..
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred EEEeCCCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999754221110 11122346788999999998889999999999999999998 8889864
Q ss_pred CchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 836 GKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
........... ..+ .....+..++..+.+++.+||..+|.+||+++|+++.|++++
T Consensus 345 ~~~~~~~~~~~-~~~--------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 345 LPMNEQFYNAI-KRG--------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCchHHHHHHH-HcC--------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 33221111111 111 111234456788999999999999999999999999999875
No 126
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.7e-37 Score=345.70 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=202.6
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
..++|+..+.||+|+||+||+|..+ +++.||+|++... .....+.+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4567888999999999999999976 6889999998642 12233457899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++|+|.+++... .++...+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999999654 3788889999999999999999999 99999999999999999999999999875432
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccC----CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
.. ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ..........
T Consensus 195 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~~--- 264 (370)
T cd05596 195 NG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMDHKN--- 264 (370)
T ss_pred CC------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-HHHHHHcCCC---
Confidence 11 1112245699999999998754 37889999999999999999999997544322 1111111000
Q ss_pred hhcccCCCCCh--HHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002158 855 IIDNRMGSYPS--ECVERFVTLALRCCHDKPEH--RPSMSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~~--~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 895 (958)
...++. ..+..+.+++.+|++.+|++ ||+++|++++
T Consensus 265 -----~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 -----SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred -----cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 011121 35678899999999999988 9999999876
No 127
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.7e-36 Score=323.83 Aligned_cols=248 Identities=28% Similarity=0.473 Sum_probs=199.4
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
+.||+|+||.||+|++. +++.||+|.+.... ......|.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999975 78999999876543 33456799999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccce
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTH 788 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 788 (958)
.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...... . ..
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~----~-~~ 151 (252)
T cd05084 81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGV----Y-AS 151 (252)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccccccc----c-cc
Confidence 99997543 34889999999999999999999999 9999999999999999999999999987542110 0 00
Q ss_pred eeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHH
Q 002158 789 VSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSEC 867 (958)
Q Consensus 789 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 867 (958)
......++..|+|||.+.+..++.++||||||+++|||++ |..||........ ...... ......+..+
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-~~~~~~---------~~~~~~~~~~ 221 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-REAIEQ---------GVRLPCPELC 221 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-HHHHHc---------CCCCCCcccC
Confidence 0111123457999999999899999999999999999998 8888864332111 111110 1112234456
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 868 VERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 868 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
+..+.+++.+|++.+|++||++.++.+.|+
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 788999999999999999999999998875
No 128
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.7e-36 Score=329.37 Aligned_cols=262 Identities=27% Similarity=0.429 Sum_probs=211.0
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECC-----CcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe-CCe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSD-----NTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE-EGE 695 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 695 (958)
..++|...+.||+|+||.||+|.+.+ +..|++|++... .....+.+.+|+.++++++|+||+++++++.. +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45678888999999999999999865 688999998754 33445678999999999999999999998866 567
Q ss_pred EEEEEEecCCCCHHHHhccCCC------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEee
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTK------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
.++++||+++++|.+++..... ..+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 8999999999999999975422 45899999999999999999999998 99999999999999999999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhh
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~ 848 (958)
||+++.+..... ........++..|+|||++.+..++.++||||||+++||+++ |+.||...... ........
T Consensus 161 ~g~~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~ 234 (280)
T cd05043 161 NALSRDLFPMDY-----HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-EMAAYLKD 234 (280)
T ss_pred CCCcccccCCce-----EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-HHHHHHHc
Confidence 999975432111 011122346778999999998889999999999999999999 99999754322 11111111
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
+. ....+..++..+.+++.+||+.||++||++.++++.|+++.+.
T Consensus 235 -~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 235 -GY--------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -CC--------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 10 1112334567899999999999999999999999999988653
No 129
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-36 Score=337.62 Aligned_cols=241 Identities=26% Similarity=0.395 Sum_probs=195.2
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|.+. +++.||||+++... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999986 57899999987542 22334567788888764 899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 150 (316)
T cd05619 81 GDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD----- 150 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-----
Confidence 99999997543 4889999999999999999999999 9999999999999999999999999987432111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... .....++.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~i~----------~~~~~~~~ 217 (316)
T cd05619 151 --AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-ELFQSIR----------MDNPCYPR 217 (316)
T ss_pred --CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-HHHHHHH----------hCCCCCCc
Confidence 1123456999999999999999999999999999999999999999754321 1111111 11112344
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMS-DVVR 894 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 894 (958)
..+..+.+++.+||+.||++||++. ++.+
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 4567889999999999999999997 5544
No 130
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.1e-36 Score=324.11 Aligned_cols=253 Identities=31% Similarity=0.470 Sum_probs=205.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
++|.....||+|+||.||+|.++++..||+|.+.... ...+.|.+|++++++++|+|++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 3577778999999999999998877789999886543 23457889999999999999999999885 456889999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.++++......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++.......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc---
Confidence 999999997655555899999999999999999999998 99999999999999999999999999976432111
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.......++..|+|||+..+..++.++||||||+++|||++ |..||.+...... ...... ......
T Consensus 158 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~~~---------~~~~~~ 224 (260)
T cd05069 158 ---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV-LEQVER---------GYRMPC 224 (260)
T ss_pred ---cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHc---------CCCCCC
Confidence 11112346678999999998899999999999999999999 8999975433221 111111 111123
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 44567889999999999999999999999998875
No 131
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.6e-36 Score=345.62 Aligned_cols=257 Identities=22% Similarity=0.317 Sum_probs=200.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.|+..+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++|+||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 5788899999999999999975 68999999986532 1234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|..+.....
T Consensus 82 ~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 82 YIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 999999999997543 4788889999999999999999999 99999999999999999999999999753321100
Q ss_pred CC------------------------------------CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHH
Q 002158 782 EG------------------------------------TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLE 825 (958)
Q Consensus 782 ~~------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~e 825 (958)
.. ...........||+.|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 00 000011123579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCC---CHHHHHHH
Q 002158 826 LLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRP---SMSDVVRE 895 (958)
Q Consensus 826 lltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~ 895 (958)
|++|+.||............. ....... .......+..+.+++.+|+ .+|.+|+ ++.+++++
T Consensus 237 ll~G~~Pf~~~~~~~~~~~i~-~~~~~~~------~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 237 MLVGQPPFLADTPAETQLKVI-NWETTLH------IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhhCCCCCCCCCHHHHHHHHh-ccCcccc------CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999999997654322211111 0000000 0011234566778888866 5999999 88999876
No 132
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.6e-36 Score=331.31 Aligned_cols=258 Identities=29% Similarity=0.484 Sum_probs=206.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC-C--cEEEEEEeccC-ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD-N--TTVAIKRAEEG-SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 699 (958)
++|+..+.||+|+||.||+|.+++ + ..+++|.++.. .....+.|.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 467888899999999999999753 3 35788888753 333456789999999999 799999999999999999999
Q ss_pred EEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 700 YEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
|||+++++|.++++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999996532 124888999999999999999999998 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~ 844 (958)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 159 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYE 229 (297)
T ss_pred EECCcCCCccccce--------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Confidence 99999998632110 01111223567999999998889999999999999999998 99999654322 1111
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
.. ........+..++..+.+++.+||+.+|.+||+++++++.|+.+....
T Consensus 230 ~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 230 KL---------PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HH---------hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11 111112234456678999999999999999999999999999988655
No 133
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.3e-36 Score=328.63 Aligned_cols=254 Identities=29% Similarity=0.482 Sum_probs=206.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+|...++||+|+||.||++... ++..||+|.+..........|.+|++++++++|+||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV 85 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence 4566789999999999999742 3568999998876666677899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCC-------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeE
Q 002158 700 YEFVPNGTLRDWLSGRTK-------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAK 766 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~k 766 (958)
|||+++++|.+++..... ..+++.+++.++.|++.|++|||+.+ ++||||||+||++++++.+|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCEE
Confidence 999999999999975431 34889999999999999999999999 99999999999999999999
Q ss_pred EeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002158 767 VADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNV 845 (958)
Q Consensus 767 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~ 845 (958)
|+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||........ ...
T Consensus 163 L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~~ 236 (280)
T cd05092 163 IGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-IEC 236 (280)
T ss_pred ECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-HHH
Confidence 999999875422110 111122335678999999999999999999999999999998 8999865433211 111
Q ss_pred HhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 846 ARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 846 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
.. .......+..++..+.+++.+||+.||.+||+++|+.+.|+
T Consensus 237 ~~---------~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 237 IT---------QGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HH---------cCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11 11112234456778999999999999999999999999876
No 134
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-36 Score=332.67 Aligned_cols=254 Identities=29% Similarity=0.478 Sum_probs=204.2
Q ss_pred CCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
|...+.||+|+||+||+|.+. ++..||+|++...... ..+.|.+|+.+++.++||||+++++++...+..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 455678999999999999863 2578999999764332 345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 700 YEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
+||+++++|.+++.... ...+++..+.+++.|++.||+|||+.+ |+||||||+||++++++.+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCce
Confidence 99999999999985321 234788899999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~ 844 (958)
||+|||+++....... ........+++.|+|||++.+..++.++||||||+++|||++ |..||.+.... ....
T Consensus 164 kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~ 237 (283)
T cd05091 164 KISDLGLFREVYAADY-----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIE 237 (283)
T ss_pred Eecccccccccccchh-----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Confidence 9999999875432111 111223346788999999998889999999999999999998 88888654321 2221
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
... .......+..++..+.+++.+||+.+|++||++++|++.|+.
T Consensus 238 ~i~---------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIR---------NRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHH---------cCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111 112223456678889999999999999999999999998863
No 135
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1e-36 Score=338.77 Aligned_cols=242 Identities=24% Similarity=0.341 Sum_probs=198.5
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|.++ +++.||||+++... ......+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999986 57899999987532 23345678899999888 799999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 150 (318)
T cd05570 81 GDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG----- 150 (318)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC-----
Confidence 99999987553 4899999999999999999999999 9999999999999999999999999986421111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... ......+.
T Consensus 151 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-~~~~~i~----------~~~~~~~~ 217 (318)
T cd05570 151 --VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-ELFQSIL----------EDEVRYPR 217 (318)
T ss_pred --CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-HHHHHHH----------cCCCCCCC
Confidence 1122346899999999999999999999999999999999999999754322 1111111 11122344
Q ss_pred HHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSM-----SDVVRE 895 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 895 (958)
..+..+.+++.+||+.||++||++ .+++++
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 567889999999999999999999 777754
No 136
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.9e-36 Score=325.73 Aligned_cols=254 Identities=29% Similarity=0.473 Sum_probs=200.3
Q ss_pred CCCceeeeeCCeEEEEEEECC-Cc--EEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------CeE
Q 002158 628 SSSTQVGQGGYGKVYKGILSD-NT--TVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------GEQ 696 (958)
Q Consensus 628 ~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~ 696 (958)
...+.||+|+||.||+|.+.+ +. .||+|.++.. .....+.|.+|+++++.++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999999764 32 6899988654 334456789999999999999999999987432 256
Q ss_pred EEEEEecCCCCHHHHhccC----CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 697 MLVYEFVPNGTLRDWLSGR----TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999987422 2234889999999999999999999998 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGM 851 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~ 851 (958)
++....... ........+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ........ +
T Consensus 159 ~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~-~- 230 (272)
T cd05075 159 SKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-EIYDYLRQ-G- 230 (272)
T ss_pred ccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHc-C-
Confidence 986532111 111122346778999999999999999999999999999999 78888653322 21111111 1
Q ss_pred chhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 852 VFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 852 ~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.....+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 231 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 -------NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11122345667899999999999999999999999999875
No 137
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.7e-36 Score=336.29 Aligned_cols=241 Identities=22% Similarity=0.315 Sum_probs=197.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 700 (958)
+|...+.||+|+||+||+|... +++.||||++.... ....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4677889999999999999976 57899999987542 22234567788888877 5899999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD- 154 (323)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC-
Confidence 9999999999996543 3889999999999999999999999 999999999999999999999999998743211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... ...
T Consensus 155 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-~~~~~i~----------~~~ 217 (323)
T cd05616 155 ------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIM----------EHN 217 (323)
T ss_pred ------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-HHHHHHH----------hCC
Confidence 11123456999999999999999999999999999999999999999754432 1111111 111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSM 889 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 889 (958)
..+|...+.++.+++.+|++.||.+|++.
T Consensus 218 ~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 23345567788999999999999999984
No 138
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.9e-36 Score=329.75 Aligned_cols=267 Identities=28% Similarity=0.444 Sum_probs=205.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-----CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-----DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~ 697 (958)
..|...+.||+|+||+||+|..+ +++.||+|++........+.|.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 36777889999999999999853 578999999987666666789999999999999999999998754 34689
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999997543 34899999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc--Cc---c
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS--GM---V 852 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~--~~---~ 852 (958)
..... ........++..|+|||++.+..++.++||||||+++|||++|..|+................ .. .
T Consensus 160 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 160 QDKEY----YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred CCCcc----eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 32211 011111224456999999998889999999999999999999987764322111000000000 00 0
Q ss_pred hhhhcc-cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 853 FSIIDN-RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 853 ~~~i~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.+.+.. .....+..++..+.+++.+||+.+|++|||++|+++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 011111 11122345677899999999999999999999999998864
No 139
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.9e-36 Score=322.93 Aligned_cols=249 Identities=27% Similarity=0.464 Sum_probs=199.3
Q ss_pred eeeeeCCeEEEEEEEC---CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 632 QVGQGGYGKVYKGILS---DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
.||+|+||.||+|.+. .+..||+|++.... ....++|.+|+.++++++|+||+++++++.. ...++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999864 35579999987653 2334679999999999999999999999864 57899999999999
Q ss_pred HHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccc
Q 002158 708 LRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPT 787 (958)
Q Consensus 708 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 787 (958)
|.+++.... ..+++.++++++.|++.||+|||+++ ++||||||+||+++.++.+||+|||+++........ .
T Consensus 81 L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~----~ 152 (257)
T cd05115 81 LNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY----Y 152 (257)
T ss_pred HHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccc----e
Confidence 999997543 35899999999999999999999999 999999999999999999999999998754322111 0
Q ss_pred eeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChH
Q 002158 788 HVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSE 866 (958)
Q Consensus 788 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 866 (958)
.......++..|+|||++....++.++||||||+++||+++ |..||....... ....... ......+..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~---------~~~~~~~~~ 222 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-VMSFIEQ---------GKRLDCPAE 222 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHHC---------CCCCCCCCC
Confidence 11112234678999999988889999999999999999997 999997543321 1111111 111234556
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 867 CVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 867 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
++.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 778999999999999999999999999998764
No 140
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4e-36 Score=323.64 Aligned_cols=248 Identities=27% Similarity=0.423 Sum_probs=199.3
Q ss_pred eeeeeCCeEEEEEEEC---CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 632 QVGQGGYGKVYKGILS---DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
.||+|+||+||+|.++ ++..||+|+++... ....+++.+|+.+++.++|+||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999763 57889999986543 2335678999999999999999999999864 4678999999999
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcc
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMP 786 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 786 (958)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~---- 151 (257)
T cd05116 81 PLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY---- 151 (257)
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe----
Confidence 9999996543 4889999999999999999999999 999999999999999999999999999765322110
Q ss_pred ceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 787 THVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 787 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
........++..|+|||.+....++.++||||||+++|||++ |..||...... ........ ......+.
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~i~~---------~~~~~~~~ 221 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-EVTQMIES---------GERMECPQ 221 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHC---------CCCCCCCC
Confidence 011112234678999999988889999999999999999998 99999754321 11111111 11123355
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.++.++.+++.+||+.||++||++++|.+.|++.
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 6778899999999999999999999999998763
No 141
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.2e-36 Score=325.57 Aligned_cols=255 Identities=29% Similarity=0.475 Sum_probs=204.2
Q ss_pred CCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe-----
Q 002158 627 FSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE----- 695 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 695 (958)
|.+.+.||+|+||.||+|.+.. +..||||+++... ......+.+|++.++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998742 3679999987542 3344679999999999999999999999866554
Q ss_pred -EEEEEEecCCCCHHHHhccC----CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeee
Q 002158 696 -QMLVYEFVPNGTLRDWLSGR----TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADF 770 (958)
Q Consensus 696 -~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DF 770 (958)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 79999999999999998543 2235899999999999999999999998 999999999999999999999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhc
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDS 849 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~ 849 (958)
|+++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||.+.... +......
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-~~~~~~~-- 229 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-EIYDYLR-- 229 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH--
Confidence 999865322211 11112335678999999988889999999999999999999 88888654432 1111111
Q ss_pred CcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 850 GMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 850 ~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.......+..++..+.+++.+||+.||++||++.|+++.|+++
T Consensus 230 -------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 -------HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -------cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1112233556778899999999999999999999999999875
No 142
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.8e-36 Score=343.06 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=202.4
Q ss_pred HHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC
Q 002158 619 ELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG 694 (958)
Q Consensus 619 el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 694 (958)
++....++|+..+.||+|+||.||+|.+. +++.||+|++... .......+.+|+.+++.++||||+++++++..++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 33445567889999999999999999986 5889999998642 2223456889999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccce
Confidence 999999999999999999654 3788899999999999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCC----CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
...... ........||+.|+|||++.+.. ++.++||||+||++|||++|+.||....... .........
T Consensus 191 ~~~~~~------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-~~~~i~~~~ 263 (370)
T cd05621 191 KMDETG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-TYSKIMDHK 263 (370)
T ss_pred ecccCC------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-HHHHHHhCC
Confidence 653211 11123456999999999997643 7789999999999999999999997544322 111111110
Q ss_pred cchhhhcccCCCCC--hHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002158 851 MVFSIIDNRMGSYP--SECVERFVTLALRCCHDKPEH--RPSMSDVVRE 895 (958)
Q Consensus 851 ~~~~~i~~~~~~~~--~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 895 (958)
. ....| ...+..+.+++.+|+..++.+ |++++|++++
T Consensus 264 ~--------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 264 N--------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred c--------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0 01112 234677889999999755543 8899999876
No 143
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.8e-36 Score=326.95 Aligned_cols=258 Identities=29% Similarity=0.487 Sum_probs=207.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CC---cEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DN---TTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.++|+..+.||+|+||.||+|..+ ++ ..||+|.++.. .....+++..|++++++++|+|++++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 346777899999999999999975 33 37999998754 23345678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++++|.+++.... ..+++.++..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999997543 34899999999999999999999999 99999999999999999999999999875532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.... .........+..|+|||++....++.++|||||||++|||++ |..||..... .........
T Consensus 160 ~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-~~~~~~i~~--------- 225 (268)
T cd05063 160 DPEG----TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-HEVMKAIND--------- 225 (268)
T ss_pred cccc----ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-HHHHHHHhc---------
Confidence 2111 111112224567999999998889999999999999999998 9999964332 112211111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
......+..++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111122334667899999999999999999999999999875
No 144
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=317.39 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=203.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--cHHHHHHHHHHHHccCCCC-cceEEEEEEeCC------e
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRLHHRN-LVSLLGYCDEEG------E 695 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~------~ 695 (958)
.|...++||+|+||+||+|+.+ +|+.||+|++...... .-....+|+.++++++|+| |+++++++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 3444567999999999999976 7899999998765332 1234579999999999999 999999998877 7
Q ss_pred EEEEEEecCCCCHHHHhccCCC--CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTK--ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
.++|+||+ .-+|.+++..... ..++...+..++.|+++||+|||+++ |+||||||.||||+++|.+||+|||+|
T Consensus 92 l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchH
Confidence 89999999 5699999987653 35777889999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
+.... +....+...+|..|.|||++.+. .|++..||||+||++.||++++.-|.+..+..+.......-+..
T Consensus 168 ra~~i-------p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP 240 (323)
T KOG0594|consen 168 RAFSI-------PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTP 240 (323)
T ss_pred HHhcC-------CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 96532 22234456688999999999987 79999999999999999999988887766655444333222211
Q ss_pred hhhh--------cc--cCCCC--ChH----H---HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSII--------DN--RMGSY--PSE----C---VERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i--------~~--~~~~~--~~~----~---~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+.. +- ..... +.. . .....+++.+|++.+|.+|.|++.++++
T Consensus 241 ~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 241 NEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1100 00 00000 111 1 1378899999999999999999999975
No 145
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.6e-36 Score=358.65 Aligned_cols=270 Identities=24% Similarity=0.357 Sum_probs=209.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+|...++||+|+||.||+|.+. +++.||||++.... ....++|.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 36788899999999999999976 58999999987532 223467999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCC---------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeee
Q 002158 701 EFVPNGTLRDWLSGRT---------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFG 771 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 771 (958)
||+++|+|.+++.... ....++..+++++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 123567788999999999999999999 9999999999999999999999999
Q ss_pred eecccccCCCCCC-----------ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhH
Q 002158 772 LSRLAPVLDDEGT-----------MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIV 840 (958)
Q Consensus 772 la~~~~~~~~~~~-----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~ 840 (958)
+++.......... ..........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986522111000 00011123569999999999999999999999999999999999999996532211
Q ss_pred HHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhHhhCCC
Q 002158 841 REVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRP-SMSDVVRELENILKMFPE 905 (958)
Q Consensus 841 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 905 (958)
...... ...+.........+..+.+++.+|++.||++|| +++++.+.|+..+...+.
T Consensus 239 i~~~~~--------i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~ 296 (932)
T PRK13184 239 ISYRDV--------ILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPE 296 (932)
T ss_pred hhhhhh--------ccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcc
Confidence 111000 000000011134567789999999999999995 677788888887765443
No 146
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.3e-36 Score=322.44 Aligned_cols=249 Identities=29% Similarity=0.474 Sum_probs=207.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
++|+..+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 46777889999999999999874 78999999987644 56689999999999999999999999998999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.++......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence 999999998766556999999999999999999999999 9999999999999999999999999987552111
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
....++..|+|||++.+..++.++||||||+++|||++ |..||..... ....... ..+ .....
T Consensus 157 ------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~-~~~--------~~~~~ 220 (256)
T cd05039 157 ------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPHV-EKG--------YRMEA 220 (256)
T ss_pred ------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHH-hcC--------CCCCC
Confidence 12234567999999998889999999999999999998 9999864432 1111111 111 11122
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
+..++..+.+++.+|+..+|++||+++|++++|+.
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 221 PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 44567889999999999999999999999999875
No 147
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.1e-36 Score=324.20 Aligned_cols=256 Identities=30% Similarity=0.497 Sum_probs=210.6
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..++|.+.+.||+|+||.||+|.+++++.||||.+.... ...+++.+|+.++++++|+|++++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 456788899999999999999998888899999987643 3456799999999999999999999999998999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.......+++.++..++.|++.|++|||+.+ ++|+||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDE-- 157 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchh--
Confidence 99999999998765556899999999999999999999999 9999999999999999999999999987653211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
........++..|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....... ....
T Consensus 158 ----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~---------~~~~ 223 (261)
T cd05034 158 ----YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VLEQVER---------GYRM 223 (261)
T ss_pred ----hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHc---------CCCC
Confidence 011112235678999999998889999999999999999999 999996543221 1111111 0011
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
..+...+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 2233456789999999999999999999999998875
No 148
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.4e-36 Score=328.44 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=202.8
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
|+..+.||+|+||+||+|.+. +++.||+|.+..... .....+.+|++++++++|+|++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 556788999999999999975 688999999865422 2234578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 99999999987655456999999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
......|+..|+|||++.+..++.++|+||||+++|||++|..||.............. .+......
T Consensus 157 ------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~-------~~~~~~~~ 223 (285)
T cd05632 157 ------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDR-------RVLETEEV 223 (285)
T ss_pred ------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-------hhhccccc
Confidence 11234689999999999999999999999999999999999999975443221111100 01111112
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
.+...+..+.+++.+|++.||++||+ +++++++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 224 YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 34456677899999999999999999 6666653
No 149
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.6e-36 Score=337.99 Aligned_cols=262 Identities=29% Similarity=0.472 Sum_probs=204.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEE------CCCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC-C
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGIL------SDNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE-G 694 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~ 694 (958)
.++|...+.||+|+||+||+|.+ .+++.||||+++... ......+.+|+.++.++ +|+||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45788899999999999999974 246889999997643 23345688999999999 689999999988654 4
Q ss_pred eEEEEEEecCCCCHHHHhccCC----------------------------------------------------------
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRT---------------------------------------------------------- 716 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~---------------------------------------------------------- 716 (958)
..++||||+++|+|.++++...
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999986432
Q ss_pred -------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcccee
Q 002158 717 -------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHV 789 (958)
Q Consensus 717 -------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 789 (958)
...+++..+.+++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----~~~ 237 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVR 237 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcc-----hhh
Confidence 123678888999999999999999999 99999999999999999999999999876422111 011
Q ss_pred eeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 790 STIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 790 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
.....++..|+|||++.+..++.++||||||+++|||++ |..||.............. .+ .....+...+
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~ 308 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-EG--------TRMRAPDYTT 308 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh-cc--------CCCCCCCCCC
Confidence 112345678999999999999999999999999999997 9999865332211111111 11 1111222345
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
..+.+++.+||+.+|++||++.|++++|+.+++.
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 6789999999999999999999999999998753
No 150
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.3e-36 Score=335.62 Aligned_cols=237 Identities=24% Similarity=0.314 Sum_probs=191.2
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHH-HHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIK-LLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|.+. +|+.||||++.... .....++.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999986 68999999986532 122344555554 56789999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (323)
T cd05575 81 GELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH------ 149 (323)
T ss_pred CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC------
Confidence 99999997543 4889999999999999999999999 999999999999999999999999998743211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......... .....+.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-~~~~~~i~~----------~~~~~~~ 217 (323)
T cd05575 150 -SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-AEMYDNILN----------KPLRLKP 217 (323)
T ss_pred -CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-HHHHHHHHc----------CCCCCCC
Confidence 1112345699999999999999999999999999999999999999975432 221111111 1112233
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMS 890 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~ 890 (958)
..+..+.+++.+|++.||++||++.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 4567889999999999999999985
No 151
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6e-36 Score=329.24 Aligned_cols=250 Identities=24% Similarity=0.381 Sum_probs=206.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.+|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|+|++++++++..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 36777789999999999999975 68899999987765555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.+. .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-- 171 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc--
Confidence 999999999643 3788999999999999999999999 99999999999999999999999999875422111
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||............... .. .....
T Consensus 172 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~-------~~~~~ 238 (296)
T cd06654 172 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GT-------PELQN 238 (296)
T ss_pred -----ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CC-------CCCCC
Confidence 112345889999999999888999999999999999999999999755432222111110 00 00122
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+...+..+.+++.+||..+|++||++.+++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 44566789999999999999999999999974
No 152
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.1e-36 Score=322.71 Aligned_cols=253 Identities=26% Similarity=0.418 Sum_probs=207.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-----hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-----QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
++|...+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999975 689999998864321 123568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++++|.+++.... .+++..+.+++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999997543 4888999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
.... ........|+..|+|||++.+..++.++||||+|+++|||++|+.||............... .
T Consensus 157 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---------~ 223 (263)
T cd06625 157 ICSS----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ---------P 223 (263)
T ss_pred cccc----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc---------C
Confidence 2111 11112345788999999999999999999999999999999999999765433222211111 1
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+..++..+.+++.+||..+|.+||++.+++++
T Consensus 224 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 224 TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1123455667889999999999999999999999874
No 153
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.9e-36 Score=326.66 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=203.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..+|+..+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 346888899999999999999975 6889999998765444556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.++++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 88 CGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 99999999997543 4889999999999999999999998 9999999999999999999999999987542211
Q ss_pred CCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.||............. ... ....
T Consensus 161 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~-~~~-----~~~~ 229 (267)
T cd06646 161 -----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMS-KSN-----FQPP 229 (267)
T ss_pred -----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeee-cCC-----CCCC
Confidence 1112345889999999984 3457789999999999999999999986433221111000 000 0000
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
........+..+.+++.+||+.+|++||+++++++++
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 230 KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0011223567899999999999999999999998754
No 154
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-37 Score=317.06 Aligned_cols=262 Identities=24% Similarity=0.347 Sum_probs=206.1
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEecc--CChhcHHHHHHHHHHHHccCCCCcceEEEEEEe-----CC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEE--GSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE-----EG 694 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~ 694 (958)
....|...+.||+|+||.|.+|..+ +|+.||||++.. ......++-.+|+.+|+.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3445555788999999999999976 789999999874 345556788999999999999999999999865 34
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..|+|+|+| +.+|...++.+.. ++...+..+..|+++||.|+|+.+ |+|||+||+|++++.+..+||+|||+||
T Consensus 100 DvYiV~elM-etDL~~iik~~~~--L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQD--LTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCcc--ccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence 689999999 6799999976543 899999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV- 852 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~- 852 (958)
....... ....+..+.|..|.|||++.. ..|+.+.||||.||++.||++|++-|.+.+.+.+.-....--+..
T Consensus 174 ~~~~~~~-----~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~ 248 (359)
T KOG0660|consen 174 YLDKFFE-----DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPS 248 (359)
T ss_pred eccccCc-----ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCC
Confidence 7754311 122345567899999999864 579999999999999999999999887655443322111111110
Q ss_pred ------------hhhhcccC--CC-----CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 ------------FSIIDNRM--GS-----YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ------------~~~i~~~~--~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+.... +. .-+.......+|+.+|+..||.+|+|++|++++
T Consensus 249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111110 11 112455678899999999999999999999975
No 155
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=318.56 Aligned_cols=247 Identities=29% Similarity=0.437 Sum_probs=210.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
-|.+..+||+|+||.||+|.++ .|+.||||.+... .+..++..|+.+|++.+.+++|++||.+-....+++|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 4566778999999999999987 6999999998753 456789999999999999999999999988889999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
.|++.|.++.++ +++++.++..++...++||+|||... -||||||+.|||++.+|.+||+|||.|-.+.. +
T Consensus 112 AGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-----T 182 (502)
T KOG0574|consen 112 AGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-----T 182 (502)
T ss_pred CCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhh-----h
Confidence 999999998654 46999999999999999999999998 89999999999999999999999999865421 1
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC--C
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG--S 862 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 862 (958)
......+.||+.|||||++....|+.++||||+|++..||..|++||.+-.... .++-+..+..+ .
T Consensus 183 --MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR----------AIFMIPT~PPPTF~ 250 (502)
T KOG0574|consen 183 --MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR----------AIFMIPTKPPPTFK 250 (502)
T ss_pred --HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc----------eeEeccCCCCCCCC
Confidence 222345779999999999999999999999999999999999999997643321 12222222222 2
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.|..+..++.+++++|+-++|++|-++.+++++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 367889999999999999999999999998875
No 156
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=5.5e-36 Score=324.42 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=208.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+|...+.||+|+||.||+|... +++.||||.+... ......++.+|+++++.++|+||+++++++..++..++|||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 5677789999999999999965 7899999987643 22334578999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 702 FVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 702 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|+++++|.+++... ....+++.++..++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 99999999998632 2345899999999999999999999999 999999999999999999999999998765321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh-HHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI-VREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~i~~ 858 (958)
.. ......|+..|+|||++.+..++.++||||||+++|||++|..||...... ........ ..
T Consensus 160 ~~-------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---------~~ 223 (267)
T cd08229 160 TT-------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE---------QC 223 (267)
T ss_pred Cc-------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh---------cC
Confidence 11 112345889999999999888999999999999999999999999643321 11111110 01
Q ss_pred cCCC-CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 859 RMGS-YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 859 ~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
..+. .+...+..+.+++.+||+.+|++|||+.+|++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1111 12356788999999999999999999999999988764
No 157
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.8e-36 Score=344.25 Aligned_cols=257 Identities=21% Similarity=0.323 Sum_probs=198.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.|...+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++|+||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5778899999999999999975 68899999987532 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 999999999997543 4788899999999999999999999 99999999999999999999999999754321100
Q ss_pred CC----------------------------------------CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHH
Q 002158 782 EG----------------------------------------TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 821 (958)
Q Consensus 782 ~~----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv 821 (958)
.. ...........||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00 00000112356999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 002158 822 VLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPS---MSDVVRE 895 (958)
Q Consensus 822 ~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 895 (958)
++|||++|+.||.................. . .. ......+.+..+++.+++ .+|++|++ +++++++
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~-~-----~~-p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLETQMKVINWQTS-L-----HI-PPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHccCCC-c-----CC-CCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 999999999999765433222211110000 0 00 011234566777777765 59999987 8877754
No 158
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.6e-36 Score=330.83 Aligned_cols=260 Identities=27% Similarity=0.447 Sum_probs=206.8
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE 695 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 695 (958)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... .....++.+|+.++++++|+||+++++++...+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4668888999999999999999754 24589999886543 3334568899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCC--------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEE
Q 002158 696 QMLVYEFVPNGTLRDWLSGRT--------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKV 767 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl 767 (958)
.++||||+++|+|.+++.... ....++..+..++.|++.||.|||+++ |+||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 999999999999999996432 233567788999999999999999999 999999999999999999999
Q ss_pred eeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002158 768 ADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVA 846 (958)
Q Consensus 768 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~ 846 (958)
+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||..... .......
T Consensus 161 ~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~~~~~~ 234 (288)
T cd05061 161 GDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV 234 (288)
T ss_pred CcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH
Confidence 99999875432111 111112235678999999999899999999999999999999 7888864322 1111111
Q ss_pred hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 847 RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
.+......+..++..+.+++.+|++.+|++||++.++++.|++.+
T Consensus 235 ---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 235 ---------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred ---------HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 111112234455688999999999999999999999999988754
No 159
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6e-36 Score=322.04 Aligned_cols=248 Identities=29% Similarity=0.472 Sum_probs=203.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEE-eCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCD-EEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lV~E~~ 703 (958)
.+|...+.||+|+||.||+|.. .+..||+|.+.... ..+.|.+|+.++++++|+|++++++++. .++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 3677788999999999999987 47889999986533 3457899999999999999999999764 456789999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.++++......+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999998765556899999999999999999999999 9999999999999999999999999987542211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
....++..|+|||++.+..++.++||||||+++|||++ |+.||.... .......... + ....
T Consensus 157 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-~~~~~~~~~~-~--------~~~~ 219 (256)
T cd05082 157 -------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEK-G--------YKMD 219 (256)
T ss_pred -------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhc-C--------CCCC
Confidence 12234567999999998899999999999999999998 999986432 2221111111 0 1122
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.+..++..+.+++.+||+.+|++||+++++++.|++
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 220 APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 344567889999999999999999999999998875
No 160
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.2e-36 Score=322.01 Aligned_cols=250 Identities=28% Similarity=0.450 Sum_probs=203.8
Q ss_pred ceeeeeCCeEEEEEEECC--C--cEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILSD--N--TTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|++|.||+|.+.+ + ..||||.+..... ...++|.+|++++++++|+||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999999753 3 3699999987665 556789999999999999999999999988 889999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 153 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--- 153 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc---
Confidence 99999997654345899999999999999999999998 999999999999999999999999999865432211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
........++..|+|||++.+..++.++||||||+++|||++ |+.||....... ........ ......+
T Consensus 154 -~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~--------~~~~~~~ 223 (257)
T cd05040 154 -YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-ILKKIDKE--------GERLERP 223 (257)
T ss_pred -eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHhc--------CCcCCCC
Confidence 111123457889999999998899999999999999999999 999996543322 11111110 0111223
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
...+..+.+++.+||+.+|++||+++++++.|.
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 456788999999999999999999999999875
No 161
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.9e-36 Score=331.13 Aligned_cols=258 Identities=31% Similarity=0.489 Sum_probs=205.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCc--EEEEEEeccC-ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNT--TVAIKRAEEG-SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 699 (958)
++|+..+.||+|+||.||+|.++ ++. .+|+|.+... .......|.+|++++.++ +|+||+++++++..++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46777889999999999999975 444 4678877653 233456788999999999 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 700 YEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
|||+++++|.++++... ...+++.+++.++.|++.||+|||+.+ ++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 99999999999997432 235789999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~ 844 (958)
||+|||+++..... .......++..|+|||++.+..++.++|||||||++|||+| |..||...... ....
T Consensus 164 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~ 234 (303)
T cd05088 164 KIADFGLSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYE 234 (303)
T ss_pred EeCccccCcccchh--------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHHH
Confidence 99999998632110 01111234668999999988889999999999999999998 99999643321 1111
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
.... ......+...+..+.+++.+||+.+|++||+++++++.|+++....
T Consensus 235 ~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 235 KLPQ---------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred HHhc---------CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1110 1011223345678899999999999999999999999998876543
No 162
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.9e-36 Score=326.78 Aligned_cols=256 Identities=28% Similarity=0.465 Sum_probs=204.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC------CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD------NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
+++|...+.||+|+||.||+|.+.+ +..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4568888999999999999999753 5678999886543 33345799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCC-----CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC---CeEEe
Q 002158 697 MLVYEFVPNGTLRDWLSGRTK-----ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL---NAKVA 768 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~---~~kl~ 768 (958)
++||||+++++|.++++.... ..+++..+++++.|++.||+|||+.+ ++||||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence 999999999999999975431 25899999999999999999999999 99999999999998754 59999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~ 847 (958)
|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||...... .......
T Consensus 162 dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~~~~~~~ 235 (277)
T cd05036 162 DFGMARDIYRASY-----YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-EVMEFVT 235 (277)
T ss_pred cCccccccCCccc-----eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHH
Confidence 9999986521110 001111223567999999999999999999999999999997 99999754321 1111111
Q ss_pred hcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 848 DSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 848 ~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
. ......+..++..+.+++.+|++.+|++||++.+++++|+
T Consensus 236 ~---------~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 236 G---------GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred c---------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1 1112334556788999999999999999999999999885
No 163
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-35 Score=333.25 Aligned_cols=264 Identities=26% Similarity=0.514 Sum_probs=210.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC--------CcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD--------NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE 693 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 693 (958)
..+|.+.+.||+|+||.||+|.+.. +..||+|.++... ....+++.+|+++++++ +|+||+++++++..+
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 3467888999999999999997521 2368999887542 33456799999999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ |+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEE
Confidence 99999999999999999997532 234788999999999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
+.++.+||+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~- 241 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP- 241 (334)
T ss_pred cCCCcEEECCcccceecccccc-----cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-
Confidence 9999999999999875532111 011112234567999999999999999999999999999999 888886432
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
.......... ......+..++..+.+++.+||+.+|++||++.|+++.|+++......
T Consensus 242 ~~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~~ 299 (334)
T cd05100 242 VEELFKLLKE---------GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTST 299 (334)
T ss_pred HHHHHHHHHc---------CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcCC
Confidence 2222221111 111223445667899999999999999999999999999998754443
No 164
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.2e-36 Score=329.66 Aligned_cols=262 Identities=26% Similarity=0.530 Sum_probs=210.6
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC--------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS--------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDE 692 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 692 (958)
...+|...+.||+|+||.||+|++. ++..||+|.+.... ....+++.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3556778899999999999999741 24579999987542 34456789999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceE
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNIL 758 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NIL 758 (958)
.+..++||||+++|+|.+++.... ...+++.++..++.|+++||+|||+.+ |+||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEE
Confidence 999999999999999999997542 234788999999999999999999999 999999999999
Q ss_pred ecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCc
Q 002158 759 LDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGK 837 (958)
Q Consensus 759 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~ 837 (958)
+++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~- 243 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 243 (304)
T ss_pred EcCCCcEEECCCccceeccccccc-----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-
Confidence 999999999999999865332211 11122346678999999998889999999999999999999 77887543
Q ss_pred hhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 838 NIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
............ .....+..++..+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 244 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 PVEELFKLLKEG---------HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CHHHHHHHHHcC---------CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 222222222111 11123445678899999999999999999999999999998754
No 165
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.9e-36 Score=325.09 Aligned_cols=259 Identities=28% Similarity=0.444 Sum_probs=205.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCc----EEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNT----TVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
.++|+..+.||+|+||+||+|.+. +++ .||+|++... .....+++.+|+.+++.++|+||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 346778899999999999999864 444 4899998754 333456789999999999999999999999764 578
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
++|||+++|+|.++++... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999997543 34899999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
..... .......++..|+|||...+..++.++|||||||++|||++ |..||....... ..... ..+
T Consensus 161 ~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~-~~~------ 227 (279)
T cd05109 161 IDETE-----YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-IPDLL-EKG------ 227 (279)
T ss_pred cccce-----eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHH-HCC------
Confidence 22111 11112235678999999999999999999999999999998 899986433211 11111 111
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
.....+..++..+.+++.+||+.||++||++.++++.|+.+...
T Consensus 228 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 228 --ERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred --CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 11122345667899999999999999999999999998877543
No 166
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.1e-36 Score=323.64 Aligned_cols=257 Identities=28% Similarity=0.456 Sum_probs=206.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
.+|...+.||+|+||.||+|.+. .+..||+|.++... ....+.|.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46777899999999999999864 23479999987543 33456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++++|.+++.... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999997543 34899999999999999999999999 999999999999999999999999999865322
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
... ........++..|+|||++.+..++.++||||||+++||+++ |..||...... .......+ .
T Consensus 160 ~~~----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-~~~~~~~~---------~ 225 (267)
T cd05066 160 PEA----AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-DVIKAIEE---------G 225 (267)
T ss_pred cce----eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-HHHHHHhC---------C
Confidence 110 111112224568999999998899999999999999999887 99999654322 11111111 1
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.....+..++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 01122334567889999999999999999999999998875
No 167
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.9e-36 Score=328.04 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=202.8
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
|+..+.||+|+||.||+|.+. +++.||||.+.... ....+.+.+|+.++++++|+|++++++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 566789999999999999976 68899999886532 22234578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 99999999997655556899999999999999999999998 9999999999999999999999999987542111
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
......|+..|+|||++.+..++.++||||||+++|||++|+.||............. .........
T Consensus 157 ------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~-------~~~~~~~~~ 223 (285)
T cd05630 157 ------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE-------RLVKEVQEE 223 (285)
T ss_pred ------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHH-------hhhhhhhhh
Confidence 1123468999999999999999999999999999999999999997543211110000 000001112
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
.+...+..+.+++.+||+.||++||+ ++|++++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 224 YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 23445677899999999999999999 7888864
No 168
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.4e-36 Score=326.11 Aligned_cols=253 Identities=26% Similarity=0.424 Sum_probs=203.0
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC------C
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE------G 694 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~------~ 694 (958)
++..|+..+.||+|+||+||+|.+. +++.||+|++.... .....+.+|+.+++++ +|+||+++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 5567788889999999999999976 68899999986543 3445788999999999 799999999998653 4
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++||||+++++|.+++.......+++..+..++.|++.|++|||+++ |+||||||+||++++++.++|+|||+++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCce
Confidence 6899999999999999998655556899999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS 849 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~ 849 (958)
...... .......|+..|+|||++. ...++.++|||||||++|||++|..||...............
T Consensus 160 ~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~- 231 (272)
T cd06637 160 QLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN- 231 (272)
T ss_pred eccccc-------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC-
Confidence 542211 1123356899999999986 335788999999999999999999999754432222211110
Q ss_pred CcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 850 GMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 850 ~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+..++..+.+++.+||..+|.+||++++++++
T Consensus 232 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 --------PAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred --------CCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 01111123456788999999999999999999999863
No 169
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1e-35 Score=319.01 Aligned_cols=247 Identities=31% Similarity=0.530 Sum_probs=200.9
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHH
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLR 709 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 709 (958)
+.||+|+||.||+|..++++.||+|.+..... .....|.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999876543 23456899999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcccee
Q 002158 710 DWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHV 789 (958)
Q Consensus 710 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 789 (958)
+++.... ..+++.++..++.|++.||.|+|+.+ ++||||||+||+++.++.+||+|||++....... ...
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~------~~~ 150 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI------YSS 150 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccc------ccc
Confidence 9997543 34889999999999999999999999 9999999999999999999999999987432111 001
Q ss_pred eeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 790 STIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 790 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
.....++..|+|||++.+..++.++||||||+++||+++ |..||........ ..... .. .....+..++
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~-~~~~~-~~--------~~~~~~~~~~ 220 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA-REQVE-KG--------YRMSCPQKCP 220 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH-HHHHH-cC--------CCCCCCCCCC
Confidence 112234678999999998889999999999999999999 9999965432211 11111 11 1112244567
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
..+.+++.+|++.+|++||++.|+++.|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 88999999999999999999999998874
No 170
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.7e-35 Score=320.41 Aligned_cols=257 Identities=26% Similarity=0.408 Sum_probs=210.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||+|+||.||+|... +|+.||+|.++.. .....+++.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 46888899999999999999987 7899999988632 2333567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 701 EFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 701 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||+++++|.+++... ....+++.++..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 2345899999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch-hHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN-IVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~-~~~~~~~~~~~~~~~~~i~ 857 (958)
... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ......... .
T Consensus 159 ~~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---------~ 222 (267)
T cd08224 159 KTT-------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE---------K 222 (267)
T ss_pred CCc-------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh---------c
Confidence 111 11234588899999999988899999999999999999999999964432 111111110 1
Q ss_pred ccCCCCCh-HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 858 NRMGSYPS-ECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 858 ~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
......+. ..+..+.+++.+||..+|++||++.+|++.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11122233 56678999999999999999999999999998763
No 171
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=9.8e-36 Score=320.13 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=206.9
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+|+..+.||+|+||.||++.+. +++.||+|.++.. .....+.+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 3677889999999999999976 6889999988643 3344567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.......++...+..++.|++.||.|||+.+ |+|+||||+||++++++.++++|||.++......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 154 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--- 154 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc---
Confidence 9999999997655556899999999999999999999999 9999999999999999999999999987553211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.......|+..|+|||++.+..++.++||||||+++|+|++|..||..... ........ .......
T Consensus 155 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~~~---------~~~~~~~ 220 (255)
T cd08219 155 ----AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-KNLILKVC---------QGSYKPL 220 (255)
T ss_pred ----cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-HHHHHHHh---------cCCCCCC
Confidence 112235688999999999988899999999999999999999999975332 11111111 1111223
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+...+..+.+++.+||+.||++||++.+++..
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 44566789999999999999999999999863
No 172
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.9e-36 Score=334.49 Aligned_cols=242 Identities=23% Similarity=0.301 Sum_probs=192.9
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHH-HHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIK-LLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|++. +++.||+|++.... ......+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999986 57889999986532 122234445544 56888999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+....+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~----- 150 (325)
T cd05602 81 GELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----- 150 (325)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC-----
Confidence 99999997543 3788888999999999999999999 9999999999999999999999999987432111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....... .....+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~----------~~~~~~~ 217 (325)
T cd05602 151 --GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILN----------KPLQLKP 217 (325)
T ss_pred --CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-HHHHHHh----------CCcCCCC
Confidence 11234569999999999999999999999999999999999999997544322 1111111 1112234
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+..+.+++.+|++.||.+||++.+.+..
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 566788999999999999999998754443
No 173
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.3e-35 Score=329.70 Aligned_cols=255 Identities=24% Similarity=0.268 Sum_probs=198.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||+|+||+||++... +++.||+|++... .....+.|.+|+.+++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36788899999999999999976 5899999998642 2223456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 9999999999997532 34889999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCCccceeeeeccCCCCccChhhhcc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ............
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~-~~~i~~~~~~~~- 228 (331)
T cd05597 157 ------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKEHFQ- 228 (331)
T ss_pred ------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCccc-
Confidence 111123469999999999973 4577899999999999999999999975432221 111111111010
Q ss_pred hcccCCCCChHHHHHHHHHHHHcccc--CCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHD--KPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~--dP~~RPs~~evl~~ 895 (958)
........+..+.+++.+|+.. ++..||++++++++
T Consensus 229 ----~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 ----FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ----CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1111223566788888887754 33447899999876
No 174
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.6e-36 Score=327.76 Aligned_cols=256 Identities=28% Similarity=0.468 Sum_probs=207.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC------CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD------NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
.++|...+.||+|+||.||+|.+++ +..||+|.+.... ......+.+|+.+++.++|+||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4577888999999999999998742 3689999987543 34455789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCC--------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEe
Q 002158 697 MLVYEFVPNGTLRDWLSGRT--------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 99999999999999996532 123788899999999999999999998 9999999999999999999999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~ 847 (958)
|||+++....... ........++..|+|||.+.+..++.++|||||||++||+++ |..||..... ........
T Consensus 162 dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~ 235 (277)
T cd05032 162 DFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-EEVLKFVI 235 (277)
T ss_pred CcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH-HHHHHHHh
Confidence 9999875432111 011122346788999999998889999999999999999998 8999864332 12111111
Q ss_pred hcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 848 DSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 848 ~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
.......+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 236 ---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 ---------DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ---------cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11122334556788999999999999999999999999875
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=7.3e-36 Score=323.91 Aligned_cols=258 Identities=29% Similarity=0.452 Sum_probs=205.1
Q ss_pred CCCCCceeeeeCCeEEEEEEECC-C---cEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSD-N---TTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.|...+.||+|+||.||+|.+.. + ..||||.+... ......+|..|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 45677899999999999999753 3 36999998764 3444568999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.... ..+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 85 EFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred ecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999997543 34899999999999999999999999 9999999999999999999999999987653322
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
..... ........+..|+|||++.+..++.++||||||+++|||++ |..||....... ....... . .
T Consensus 161 ~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-~~~~i~~-~--------~ 228 (269)
T cd05065 161 SDPTY--TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-VINAIEQ-D--------Y 228 (269)
T ss_pred ccccc--ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-HHHHHHc-C--------C
Confidence 11110 00111112457999999999999999999999999999987 999996543221 1111110 0 0
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
....+.+++..+.+++.+||+.+|++||+++++++.|+++
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1122345677889999999999999999999999998875
No 176
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1e-35 Score=322.01 Aligned_cols=255 Identities=27% Similarity=0.468 Sum_probs=206.4
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCC------hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGS------LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+|...+.||+|+||+||+|...+++.||||.+.... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 367788999999999999998889999999876432 12234688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.++|+|||+++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999996543 4789999999999999999999999 999999999999999999999999998765322
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
...... ........|+..|+|||++.+..++.++||||||+++|||++|+.||................ ..
T Consensus 156 ~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~ 226 (265)
T cd06631 156 GLHGTH-SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHR--------GL 226 (265)
T ss_pred cccccc-cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhcc--------CC
Confidence 111111 112233568999999999999889999999999999999999999997544332221111110 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
....+...+..+.+++.+||+.+|++||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 12334556788999999999999999999999886
No 177
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.6e-36 Score=316.74 Aligned_cols=257 Identities=25% Similarity=0.314 Sum_probs=210.3
Q ss_pred CCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccCChh---cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQ---GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
|...+.||+|.-|+||.+..++ +..+|+|++.+.... ...+.+.|-+||+.++||.++.+|+.++.++..++||||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey 158 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY 158 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence 3445679999999999999874 689999999876433 345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC--
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD-- 780 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~-- 780 (958)
|+||+|....+.+....+++..+..++..++-||+|||-.| ||.|||||+||||.++|.+.|+||.++.......
T Consensus 159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 99999999999988888999999999999999999999999 9999999999999999999999999985442100
Q ss_pred -----------------------------CCCC-----------------cc-ceeeeeccCCCCccChhhhccCCCCCc
Q 002158 781 -----------------------------DEGT-----------------MP-THVSTIVKGTPGYLDPEYFLTHKLTDK 813 (958)
Q Consensus 781 -----------------------------~~~~-----------------~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~ 813 (958)
.... .+ ...+..++||-.|+|||++.+...+.+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA 315 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA 315 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCch
Confidence 0000 00 112345789999999999999999999
Q ss_pred chhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCC----H
Q 002158 814 SDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPS----M 889 (958)
Q Consensus 814 ~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~ 889 (958)
+|.|+|||++|||+.|.-||.+..+.....+...+.-. .+.. +..+..+.+||++.+.+||.+|-- +
T Consensus 316 VDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~--------Fp~~-~~vs~~akDLIr~LLvKdP~kRlg~~rGA 386 (459)
T KOG0610|consen 316 VDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK--------FPEE-PEVSSAAKDLIRKLLVKDPSKRLGSKRGA 386 (459)
T ss_pred hhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc--------CCCC-CcchhHHHHHHHHHhccChhhhhccccch
Confidence 99999999999999999999876554333222221111 1122 256678999999999999999988 7
Q ss_pred HHHHHH
Q 002158 890 SDVVRE 895 (958)
Q Consensus 890 ~evl~~ 895 (958)
+||-++
T Consensus 387 ~eIK~H 392 (459)
T KOG0610|consen 387 AEIKRH 392 (459)
T ss_pred HHhhcC
Confidence 777765
No 178
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7e-36 Score=331.72 Aligned_cols=264 Identities=27% Similarity=0.512 Sum_probs=209.8
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC--------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS--------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDE 692 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 692 (958)
..++|.+.+.||+|+||.||+|... ....||+|.+.... .....++.+|+++++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3456778899999999999999752 24579999987542 33456788999999999 69999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceE
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNIL 758 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NIL 758 (958)
.+..++||||+++|+|.+++.... ...+++.++.+++.|++.||+|||+++ ++||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEE
Confidence 999999999999999999996532 234889999999999999999999999 999999999999
Q ss_pred ecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCc
Q 002158 759 LDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGK 837 (958)
Q Consensus 759 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~ 837 (958)
+++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYY-----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred EcCCCcEEEccccccccccccccc-----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999765322111 01111234567999999999899999999999999999999 888886432
Q ss_pred hhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 838 NIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
. ......... ......+..++..+.+++.+||+.+|++||++.++++.|+++.....
T Consensus 242 ~-~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 298 (314)
T cd05099 242 V-EELFKLLRE---------GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVS 298 (314)
T ss_pred H-HHHHHHHHc---------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhc
Confidence 2 121111111 11122344567789999999999999999999999999999876543
No 179
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-35 Score=328.92 Aligned_cols=261 Identities=28% Similarity=0.527 Sum_probs=209.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC--------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS--------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE 693 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 693 (958)
.++|.+.+.||+|+||.||+|.+. +...||+|.+.... .....++.+|+++++++ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 356888899999999999999853 23579999987542 33455788999999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
+..++||||+++|+|.+++..+. ...+++.++++++.|++.||+|||+.+ ++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 99999999999999999997542 134889999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
+.++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||... .
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~ 247 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-P 247 (307)
T ss_pred cCCCcEEECCCcccccccccchh-----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-C
Confidence 99999999999998754321110 11112234568999999999889999999999999999998 88888543 2
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
.......... . .....+..++..+.+++.+||..+|++||++.++++.|+++.+.
T Consensus 248 ~~~~~~~~~~-~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 VEELFKLLKE-G--------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHHc-C--------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 2222221111 1 11233455678899999999999999999999999999998764
No 180
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.3e-35 Score=330.07 Aligned_cols=255 Identities=24% Similarity=0.274 Sum_probs=198.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||++.++ .++.||+|++.... ......|.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36788899999999999999986 57889999986421 222345888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999997532 34889999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCCCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
........||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...........
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~-- 227 (332)
T cd05623 157 ------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKERF-- 227 (332)
T ss_pred ------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH-HHHHhCCCccc--
Confidence 11122356999999999986 34578899999999999999999999975443222 22111111000
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCC--CCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPE--HRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~ 895 (958)
..+.....++..+.+++.+|+..+++ .|++++|++++
T Consensus 228 ---~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 ---QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ---cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 01112234567888999998865444 46899999876
No 181
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.3e-36 Score=339.57 Aligned_cols=261 Identities=20% Similarity=0.286 Sum_probs=204.9
Q ss_pred hHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe
Q 002158 617 FKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE 692 (958)
Q Consensus 617 ~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 692 (958)
++++....++|+..+.||+|+||.||+|.++ +++.||+|++... .......+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455666789999999999999999999986 6889999998642 22234457899999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
++..++||||+++|+|.+++... .++...+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999999999654 3788889999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCC----CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~ 848 (958)
++...... ........||+.|+|||++.... ++.++|||||||++|||++|+.||....... .......
T Consensus 189 a~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~ 261 (371)
T cd05622 189 CMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMN 261 (371)
T ss_pred eeEcCcCC------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-HHHHHHc
Confidence 98653211 11123456999999999997543 7889999999999999999999997544322 1111111
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCC--CCCHHHHHHHH
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEH--RPSMSDVVREL 896 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 896 (958)
...... . ......+..+.+++.+|+..++.+ ||+++|++++.
T Consensus 262 ~~~~~~-----~-~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 262 HKNSLT-----F-PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCCccc-----C-CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 110000 0 112245678889999999844433 78999988763
No 182
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.1e-35 Score=322.30 Aligned_cols=257 Identities=26% Similarity=0.377 Sum_probs=207.1
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
++.+++.+.....||+|+||.||+|.+. ++..||+|.+........+.+.+|++++++++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3445667777789999999999999965 678899999887666667789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCc--hHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeeeeecc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENL--NFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFGLSRL 775 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~ 775 (958)
||||+++++|.+++..... .+ ++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.++|+|||++..
T Consensus 83 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999975432 24 78888999999999999999998 999999999999986 67999999999875
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCC--CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
...... ......|+..|+|||++.... ++.++||||||+++|||++|+.||.............
T Consensus 159 ~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~------- 224 (268)
T cd06624 159 LAGINP-------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV------- 224 (268)
T ss_pred cccCCC-------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh-------
Confidence 422111 112235889999999986644 7889999999999999999999996433211111100
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.........+...+.++.+++.+||+.+|++||++.|++++
T Consensus 225 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 225 -GMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred -hhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 01111233455677889999999999999999999999864
No 183
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7.5e-36 Score=333.04 Aligned_cols=241 Identities=24% Similarity=0.298 Sum_probs=192.8
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHH-HHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIK-LLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|... +|+.||+|++.... .....++..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999976 68999999986532 223345566655 56778999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~----- 150 (325)
T cd05604 81 GELFFHLQRER--SFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS----- 150 (325)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-----
Confidence 99999986543 4899999999999999999999999 9999999999999999999999999987432111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ . ....+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~~~~---------~-~~~~~~ 217 (325)
T cd05604 151 --DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-EMYDNILH---------K-PLVLRP 217 (325)
T ss_pred --CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-HHHHHHHc---------C-CccCCC
Confidence 1123456999999999999999999999999999999999999999754322 21111111 1 111223
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
..+..+.+++.+|++.+|.+||++.+.++
T Consensus 218 ~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 218 GASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred CCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 45677889999999999999998864443
No 184
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=9.1e-36 Score=327.78 Aligned_cols=263 Identities=27% Similarity=0.398 Sum_probs=202.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC---------------CcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD---------------NTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLL 687 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~ 687 (958)
..+|...+.||+|+||.||++...+ ...||+|.+... .......|.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3568888999999999999987642 235899998764 333445799999999999999999999
Q ss_pred EEEEeCCeEEEEEEecCCCCHHHHhccCC----------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccce
Q 002158 688 GYCDEEGEQMLVYEFVPNGTLRDWLSGRT----------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNI 757 (958)
Q Consensus 688 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NI 757 (958)
+++...+..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence 99999999999999999999999996432 123688999999999999999999999 99999999999
Q ss_pred EecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh--CCCCCCC
Q 002158 758 LLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT--GMQPISH 835 (958)
Q Consensus 758 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt--G~~P~~~ 835 (958)
++++++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred EEcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999875432111 111122345778999999999999999999999999999998 5667754
Q ss_pred CchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 836 GKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
.... ........ .............+...+..+.+++.+||+.+|++||++++|++.|+
T Consensus 236 ~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 236 LSDE-QVIENTGE--FFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cChH-HHHHHHHH--hhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 3221 11111000 00000000011223345678999999999999999999999999875
No 185
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4e-36 Score=334.66 Aligned_cols=242 Identities=23% Similarity=0.323 Sum_probs=196.7
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~ 700 (958)
+|+..+.||+|+||+||+|... +++.||+|++.... ....+.+..|.++++.+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999976 68899999987532 223456788999998885 577888999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 9999999999996543 4899999999999999999999999 9999999999999999999999999987432111
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....... ...
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-~~~~~i~----------~~~ 217 (323)
T cd05615 156 -------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-ELFQSIM----------EHN 217 (323)
T ss_pred -------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHH----------hCC
Confidence 1123456999999999999999999999999999999999999999754432 1111111 111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMS 890 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 890 (958)
...|...+..+.+++.+|++.+|.+|++..
T Consensus 218 ~~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 218 VSYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CCCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 233455667889999999999999999853
No 186
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=9.2e-36 Score=325.52 Aligned_cols=250 Identities=24% Similarity=0.373 Sum_probs=202.6
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
|+..+.||+|+||.||+|.+. ++..+++|.+........+.+.+|+++++.++|+|++++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 556678999999999999986 5788899998766666667899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----- 157 (282)
T cd06643 87 GAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI----- 157 (282)
T ss_pred CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc-----
Confidence 99999886432 35899999999999999999999999 9999999999999999999999999987542111
Q ss_pred cceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.......|+..|+|||++. +..++.++|||||||++|||++|+.||................ ...
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~--------~~~ 227 (282)
T cd06643 158 --QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--------PPT 227 (282)
T ss_pred --cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC--------CCC
Confidence 1122345899999999984 3457789999999999999999999997543322211111100 001
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+..++..+.+++.+||+.+|.+||++++++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 228 LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11234566789999999999999999999999864
No 187
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4e-36 Score=335.29 Aligned_cols=238 Identities=22% Similarity=0.310 Sum_probs=193.6
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|... +++.||+|+++... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999976 57899999997642 22345688999999888 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------ 149 (327)
T cd05617 81 GDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP------ 149 (327)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC------
Confidence 99999986543 4899999999999999999999999 999999999999999999999999998742111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc-----hhHHHHHHHhhcCcchhhhcccC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK-----NIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...... .+.+....
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~---------~~~~~~~~ 219 (327)
T cd05617 150 -GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL---------FQVILEKP 219 (327)
T ss_pred -CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH---------HHHHHhCC
Confidence 111234569999999999999999999999999999999999999995321 111111 11111122
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSM 889 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 889 (958)
...|...+..+.+++.+|++.||++|+++
T Consensus 220 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 220 IRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 23455566788999999999999999984
No 188
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.8e-36 Score=337.28 Aligned_cols=256 Identities=23% Similarity=0.309 Sum_probs=198.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC------
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG------ 694 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 694 (958)
.++|...+.||+|+||.||+|... +|+.||||++... ......++.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 467888999999999999999975 6899999998653 2333567889999999999999999999986543
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++||||++ ++|.+.++. .++...+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 100 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 100 DVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred eeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 4799999996 567777642 2788889999999999999999999 9999999999999999999999999987
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc--
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV-- 852 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~-- 852 (958)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........+.......+..
T Consensus 172 ~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 243 (359)
T cd07876 172 TACTN--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243 (359)
T ss_pred ccccC--------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 53211 11223468999999999999999999999999999999999999997654332221111110000
Q ss_pred ----------hhhhcc--cC-----------------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 ----------FSIIDN--RM-----------------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ----------~~~i~~--~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... .. .......+..+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 00 00111234678999999999999999999999975
No 189
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.6e-35 Score=319.73 Aligned_cols=254 Identities=33% Similarity=0.519 Sum_probs=197.5
Q ss_pred ceeeeeCCeEEEEEEEC----CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEE-eCCeEEEEEEecC
Q 002158 631 TQVGQGGYGKVYKGILS----DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCD-EEGEQMLVYEFVP 704 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lV~E~~~ 704 (958)
+.||+|+||.||+|.+. ++..||+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999863 2457999988643 3344567899999999999999999999875 4556899999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+|+|.+++.... ...++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~--- 153 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY--- 153 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcc---
Confidence 999999997543 23677888999999999999999998 99999999999999999999999999875422110
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhC-CCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTG-MQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
..........++..|+|||++.+..++.++||||||+++|||++| ..||..... ......... ......
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~ 223 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS-FDITVYLLQ---------GRRLLQ 223 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHhc---------CCCCCC
Confidence 001111233467789999999988999999999999999999995 555643322 222211111 111122
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
+..++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 33456789999999999999999999999999998753
No 190
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.6e-35 Score=319.01 Aligned_cols=250 Identities=30% Similarity=0.519 Sum_probs=200.7
Q ss_pred ceeeeeCCeEEEEEEECC----CcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILSD----NTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||.||+|.+.. +..||+|.+..... ...+++.+|+++++++.|+||+++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 469999999999998642 26899999876543 345679999999999999999999998764 468999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcc---
Confidence 99999997654 5899999999999999999999999 999999999999999999999999999865322211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
........++..|+|||.+.+..++.++||||||+++|||++ |..||...... ........ . .....+
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~~~~-~--------~~~~~~ 220 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAMLES-G--------ERLPRP 220 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHHc-C--------CcCCCC
Confidence 111112234568999999998899999999999999999998 99999654332 11111111 1 111234
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
..++..+.+++.+||..+|++||++.++++.|+++.
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 456678999999999999999999999999998753
No 191
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=6.7e-36 Score=327.67 Aligned_cols=257 Identities=30% Similarity=0.484 Sum_probs=206.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
.++|+..+.||+|+||.||+|.++ ++..||+|++.... ....++|.+|++++++++||||+++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457888899999999999999863 46789999987643 33456799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCC--------------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRT--------------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASN 756 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~N 756 (958)
++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 99999999999999996421 124788899999999999999999998 9999999999
Q ss_pred eEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCC
Q 002158 757 ILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISH 835 (958)
Q Consensus 757 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~ 835 (958)
|++++++.++|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.+
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY-----YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred eEecCCCceEECccccceecccCcc-----ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999875422111 011112234667999999998899999999999999999998 8888864
Q ss_pred CchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 836 GKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
... ......... ......+..++.++.+++.+||+.+|++||++.|+++.|++
T Consensus 236 ~~~-~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 236 MAH-EEVIYYVRD---------GNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCH-HHHHHHHhc---------CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 332 222221111 11112244567889999999999999999999999998863
No 192
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.9e-35 Score=320.21 Aligned_cols=254 Identities=25% Similarity=0.437 Sum_probs=205.7
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh---------cHHHHHHHHHHHHccCCCCcceEEEEEEeCCe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ---------GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE 695 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 695 (958)
+|...+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3667789999999999999975 6889999988654221 12468899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999754 34888999999999999999999998 99999999999999999999999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
.......... ........|+..|+|||.+.+..++.++||||+|+++|||++|+.||........... .
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----------~ 224 (267)
T cd06628 156 LEANSLSTKT-NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK----------I 224 (267)
T ss_pred cccccccCCc-cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH----------H
Confidence 6421111111 1111234588999999999988899999999999999999999999976443222111 1
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........+...+..+.+++.+||+.||.+||++.|++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 225 GENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred hccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 1111233455677889999999999999999999999863
No 193
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.8e-35 Score=321.03 Aligned_cols=257 Identities=26% Similarity=0.446 Sum_probs=207.4
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.++|...+.||+|+||.||+|.+.+ ...||||...... ....+.|.+|+.++++++||||+++++++.. +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3457778899999999999998643 3468999887654 4455689999999999999999999999876 46789
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999999999997543 34899999999999999999999998 99999999999999999999999999876532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.. ........++..|+|||.+....++.++||||||+++|||++ |..||.......... ....
T Consensus 160 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~-~~~~--------- 223 (270)
T cd05056 160 ES------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG-RIEN--------- 223 (270)
T ss_pred cc------ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHc---------
Confidence 21 111122235568999999988889999999999999999996 999997554322211 1111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
......+..++..+.+++.+|+..+|++||++.++++.|+++..
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 224 GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11112345567889999999999999999999999999998764
No 194
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-35 Score=321.60 Aligned_cols=249 Identities=32% Similarity=0.512 Sum_probs=198.8
Q ss_pred ceeeeeCCeEEEEEEECC-Cc--EEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILSD-NT--TVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||.||+|.+++ +. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999864 43 46888887533 34456789999999999 799999999999999999999999999
Q ss_pred CCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeee
Q 002158 706 GTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFG 771 (958)
Q Consensus 706 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 771 (958)
|+|.+++.... ...+++.++..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999997532 124789999999999999999999998 9999999999999999999999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcC
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~ 850 (958)
+++..... ........+..|+|||++....++.++||||||+++|||++ |..||..... .........
T Consensus 158 l~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~~~~-- 226 (270)
T cd05047 158 LSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQ-- 226 (270)
T ss_pred Cccccchh--------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHHHhC--
Confidence 98632110 01111234567999999988889999999999999999997 9999964332 111111111
Q ss_pred cchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 851 MVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 851 ~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
......+..++..+.+++.+||+.+|.+||++.++++.|++++
T Consensus 227 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 -------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -------CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0111223445678899999999999999999999999998875
No 195
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.7e-35 Score=329.23 Aligned_cols=255 Identities=24% Similarity=0.276 Sum_probs=198.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+++.. +++.||+|++... .......+.+|..++..++|+||+++++++..++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36788899999999999999976 6889999998652 1223345888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999997532 34889999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCCccceeeeeccCCCCccChhhhcc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
........||++|+|||++.+ ..++.++|||||||++|||++|+.||........ ...........
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~-- 227 (331)
T cd05624 157 ------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHEERF-- 227 (331)
T ss_pred ------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH-HHHHHcCCCcc--
Confidence 111223569999999999875 4678899999999999999999999975443221 11111111000
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEH--RPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 895 (958)
..+......+.++.+++.+|+..++++ |+++++++++
T Consensus 228 ---~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 228 ---QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ---cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 011112234678889999998865544 4688888765
No 196
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-35 Score=325.21 Aligned_cols=267 Identities=26% Similarity=0.457 Sum_probs=205.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-----CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-----DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 696 (958)
..|...+.||+|+||.||++.+. ++..||+|.++... ......+.+|++++++++|+|++++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 35677889999999999999842 47889999987543 33346799999999999999999999998775 568
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++++|.+++.... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999996543 34899999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHH-HhhcCc---c
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNV-ARDSGM---V 852 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~-~~~~~~---~ 852 (958)
...... ........|+..|+|||++.+..++.++||||||+++|||++++.|............. ...... .
T Consensus 160 ~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 160 ETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 322111 11112345777899999999888999999999999999999987765322111000000 000000 0
Q ss_pred hhhh-cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 853 FSII-DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 853 ~~~i-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
...+ .......+..++..+.+++.+||+.+|++||+++++++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000 1111122445678899999999999999999999999999875
No 197
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8.7e-36 Score=338.92 Aligned_cols=258 Identities=24% Similarity=0.314 Sum_probs=199.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC-----eEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG-----EQM 697 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 697 (958)
+|+..+.||+|+||+||+|... +++.||||++... .....+++.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999975 7899999998653 2334567889999999999999999999998776 789
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+. ++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999995 68888886443 4899999999999999999999999 9999999999999999999999999998643
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC--c---
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG--M--- 851 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~--~--- 851 (958)
.... .......++..|+|||++.+. .++.++||||+||++|||++|+.||................+ .
T Consensus 155 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 155 PDES------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred cCcc------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 2211 111234578999999999874 478899999999999999999999975443221111100000 0
Q ss_pred -------chhhhcccC---------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 -------VFSIIDNRM---------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 -------~~~~i~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+.... .......++++.+++.+|++.||++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000 01122345678999999999999999999999875
No 198
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.9e-35 Score=319.00 Aligned_cols=254 Identities=27% Similarity=0.472 Sum_probs=207.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.++|...+.||+|+||.||+|.+.++..||+|.+.... ...+.|.+|++++++++|+||+++++++.. ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 45778889999999999999998788889999887543 334678999999999999999999999887 7889999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.......+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 157 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc--
Confidence 9999999997655556889999999999999999999998 99999999999999999999999999875432111
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.......++..|+|||++....++.++|+||||+++||+++ |..||....... ....... + ....
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~~~~~~~-~--------~~~~ 223 (260)
T cd05073 158 ----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRALER-G--------YRMP 223 (260)
T ss_pred ----ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHhC-C--------CCCC
Confidence 11112345678999999998889999999999999999999 899996543221 1111111 1 0112
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.+...+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 224 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 234456789999999999999999999999998875
No 199
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-35 Score=331.33 Aligned_cols=261 Identities=19% Similarity=0.258 Sum_probs=197.2
Q ss_pred Cceeeee--CCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 630 STQVGQG--GYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 630 ~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
.++||+| +||+||++..+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4679999 78899999975 78999999987542 2233467789999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++|||.+...........
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 999999997654445899999999999999999999999 99999999999999999999999987543321111000
Q ss_pred ccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc-----
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID----- 857 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~----- 857 (958)
..........++..|+|||++.+ ..++.++|||||||++|||++|+.||.............. +.....++
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 237 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCccccccccchh
Confidence 00011122346778999999976 4588999999999999999999999975332111111110 00000000
Q ss_pred --------------c------------------cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 --------------N------------------RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 --------------~------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. .........+..+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0 0001122345688999999999999999999999974
No 200
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.8e-35 Score=325.66 Aligned_cols=262 Identities=29% Similarity=0.438 Sum_probs=205.6
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC-----------------CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcce
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD-----------------NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVS 685 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~ 685 (958)
..+|...+.||+|+||.||+|.+.+ +..||+|.+.... ....+.+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3567888999999999999998642 2468999987653 344567899999999999999999
Q ss_pred EEEEEEeCCeEEEEEEecCCCCHHHHhccCC---------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccc
Q 002158 686 LLGYCDEEGEQMLVYEFVPNGTLRDWLSGRT---------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASN 756 (958)
Q Consensus 686 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~N 756 (958)
+++++..++..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999999999999999999999999997543 125899999999999999999999999 9999999999
Q ss_pred eEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh--CCCCCC
Q 002158 757 ILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT--GMQPIS 834 (958)
Q Consensus 757 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt--G~~P~~ 834 (958)
|+++.++.++|+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-----YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-----eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 9999999999999999875432111 111223446788999999998889999999999999999998 677876
Q ss_pred CCchhHHHHHHHhhcCcchhhhccc-CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 835 HGKNIVREVNVARDSGMVFSIIDNR-MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
...... ....... ........ ....+..++.++.+++.+||+.||++||++.|+++.|+
T Consensus 236 ~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 236 HLTDQQ-VIENAGH---FFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CcChHH-HHHHHHh---ccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 433211 1111110 00000000 01123345678999999999999999999999999875
No 201
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.9e-36 Score=346.14 Aligned_cols=256 Identities=22% Similarity=0.357 Sum_probs=194.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--------C
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--------G 694 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~ 694 (958)
..+|...+.||+|+||+||+|... +++.||||++.... ....+|+.+++.++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 356888999999999999999975 68899999886432 2234799999999999999999986432 2
Q ss_pred eEEEEEEecCCCCHHHHhcc--CCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-CeEEeeee
Q 002158 695 EQMLVYEFVPNGTLRDWLSG--RTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-NAKVADFG 771 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFG 771 (958)
..++||||++ ++|.+++.. .....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 4679999996 578777753 22345899999999999999999999999 99999999999999665 79999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
+|+...... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||.+..............+
T Consensus 217 la~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~ 288 (440)
T PTZ00036 217 SAKNLLAGQ--------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG 288 (440)
T ss_pred cchhccCCC--------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 998653211 11234689999999998764 689999999999999999999999976543322222111100
Q ss_pred cc-h---hhhc--------cc-----C-CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 851 MV-F---SIID--------NR-----M-GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 851 ~~-~---~~i~--------~~-----~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. . .... +. + ..+|...+.++.+++.+||+.||.+||++.|++++
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00 0 0000 00 0 11233456789999999999999999999999965
No 202
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-35 Score=324.82 Aligned_cols=258 Identities=26% Similarity=0.336 Sum_probs=196.8
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHcc---CCCCcceEEEEEEe-----CC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRL---HHRNLVSLLGYCDE-----EG 694 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~-----~~ 694 (958)
+|+..+.||+|+||+||+|.+. +++.||+|.+..... .....+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4677889999999999999976 688999998875322 1223466777777665 69999999998864 34
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++||||++ ++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccc
Confidence 5799999997 58999997655556899999999999999999999999 9999999999999999999999999997
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc---
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM--- 851 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~--- 851 (958)
...... ......||..|+|||++.+..++.++||||+||++|||++|+.||................+.
T Consensus 157 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 157 IYSCQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228 (288)
T ss_pred cccCcc--------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCCh
Confidence 653211 112345889999999999999999999999999999999999999654432211111110000
Q ss_pred --chhhh---cccC--------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 --VFSII---DNRM--------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 --~~~~i---~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..... .... .......+..+.+++.+|++.||++||++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 0000 01112356778999999999999999999999863
No 203
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2e-35 Score=320.52 Aligned_cols=252 Identities=29% Similarity=0.408 Sum_probs=193.3
Q ss_pred eeeeeCCeEEEEEEECC---CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 632 QVGQGGYGKVYKGILSD---NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
.||+|+||.||+|.+.+ +..+|+|.++... ......|.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998653 4579999887643 3334578999999999999999999999999999999999999999
Q ss_pred HHHHhccCC---CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 708 LRDWLSGRT---KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 708 L~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
|.++++... ....++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--- 155 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY--- 155 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcce---
Confidence 999997532 224677788899999999999999999 99999999999999999999999999864321110
Q ss_pred ccceeeeeccCCCCccChhhhccC-------CCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTH-------KLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
........|+..|+|||++... .++.++||||||+++|||++ |+.||.............. .......
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~ 231 (269)
T cd05087 156 --YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVR--EQQLKLP 231 (269)
T ss_pred --eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhh--cccCCCC
Confidence 1111234578889999998642 35789999999999999997 9999975443222111111 1001111
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
. +......++.+.+++.+|| .+|++||+++||++.|+
T Consensus 232 ~---~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 K---PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C---CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 1112234567889999999 68999999999998764
No 204
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-35 Score=323.44 Aligned_cols=238 Identities=26% Similarity=0.380 Sum_probs=188.8
Q ss_pred eeeeeCCeEEEEEEECC-------------------------CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceE
Q 002158 632 QVGQGGYGKVYKGILSD-------------------------NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSL 686 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 686 (958)
.||+|+||.||+|.+.. ...||+|++.........+|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999998521 23589999876554445678999999999999999999
Q ss_pred EEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC---
Q 002158 687 LGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL--- 763 (958)
Q Consensus 687 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~--- 763 (958)
+++|......++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCccc
Confidence 999999999999999999999999996532 35889999999999999999999998 99999999999997654
Q ss_pred ----CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHH-hCCCCCCCCc
Q 002158 764 ----NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELL-TGMQPISHGK 837 (958)
Q Consensus 764 ----~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~ell-tG~~P~~~~~ 837 (958)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||....
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred CccceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 3899999987643110 11247788999999875 56889999999999999995 6999986533
Q ss_pred hhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 838 NIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.... ..... . ....+......+.+++.+||+.+|++||+++++++.|
T Consensus 227 ~~~~-~~~~~----------~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 227 PSEK-ERFYE----------K-KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred hHHH-HHHHH----------h-ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2111 11000 0 0111222345789999999999999999999999876
No 205
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.4e-35 Score=324.55 Aligned_cols=262 Identities=27% Similarity=0.419 Sum_probs=203.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-----------------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-----------------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSL 686 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l 686 (958)
++|+..+.||+|+||.||++.+. ++..||+|++.... .....+|.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888899999999999998643 23468999987643 3345679999999999999999999
Q ss_pred EEEEEeCCeEEEEEEecCCCCHHHHhccCCC---------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccce
Q 002158 687 LGYCDEEGEQMLVYEFVPNGTLRDWLSGRTK---------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNI 757 (958)
Q Consensus 687 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NI 757 (958)
++++...+..++||||+++++|.+++..... ..+++.++..++.|++.||+|||+.+ ++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 9999999999999999999999999975421 23778899999999999999999999 99999999999
Q ss_pred EecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh--CCCCCCC
Q 002158 758 LLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT--GMQPISH 835 (958)
Q Consensus 758 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt--G~~P~~~ 835 (958)
+++.++.++|+|||+++....... ........++..|+|||....+.++.++|||||||++|||++ |..||..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 999999999999999875422111 011112334678999999988899999999999999999998 6788864
Q ss_pred CchhHHHHHHHhhcCcchhhh-cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 836 GKNIVREVNVARDSGMVFSII-DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.... ..+.... ..+... .......+..++..+.+++.+||+.||++||++.+|++.|++
T Consensus 237 ~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 237 LSDE-QVIENTG---EFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred cChH-HHHHHHH---HHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 3321 1111000 000000 000112234566889999999999999999999999998863
No 206
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.6e-35 Score=319.12 Aligned_cols=249 Identities=36% Similarity=0.558 Sum_probs=206.1
Q ss_pred ceeeeeCCeEEEEEEECC----CcEEEEEEeccCChhc-HHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILSD----NTTVAIKRAEEGSLQG-QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||.||+|.+.. +..||+|.+....... .+.+.+|++.++.++|+|++++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999763 7899999987654333 57899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCC-------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 706 GTLRDWLSGRT-------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 706 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
++|.+++.... ...+++.++..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999997652 245999999999999999999999998 99999999999999999999999999986543
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ........++..|+|||.+....++.++||||+|+++|||++ |..||...... ....... .
T Consensus 158 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~---------~ 222 (262)
T cd00192 158 DDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-EVLEYLR---------K 222 (262)
T ss_pred ccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHH---------c
Confidence 221 111233457889999999998889999999999999999999 69999765321 1111111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
......+..++..+.+++.+||+.+|++||++.|++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1122335556788999999999999999999999998763
No 207
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.5e-35 Score=328.22 Aligned_cols=259 Identities=20% Similarity=0.319 Sum_probs=199.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|+.+ +++.||+|.++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 45778889999999999999976 678899999875432 2334678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ ++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 86 LD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 96 58988886543 34788999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc----chhhh-
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM----VFSII- 856 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~----~~~~i- 856 (958)
.......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||................+. ....+
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 159 -----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred -----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 11122457899999999865 45788999999999999999999999754422111111100000 00000
Q ss_pred ------cccCC--------CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 ------DNRMG--------SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ------~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+.... ......+.++.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000 0112345678899999999999999999999974
No 208
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.7e-35 Score=319.57 Aligned_cols=239 Identities=21% Similarity=0.384 Sum_probs=190.5
Q ss_pred ceeeeeCCeEEEEEEECC-------------CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 631 TQVGQGGYGKVYKGILSD-------------NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
+.||+|+||.||+|++.. ...||+|.+..........|.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998632 2358899887655555567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC-------eEEeee
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN-------AKVADF 770 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~-------~kl~DF 770 (958)
+||||+++|+|..++.... ..+++..+.+++.|+++||+|||+.+ |+||||||+|||++.++. ++++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999987543 34899999999999999999999999 999999999999987664 899999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhc-cCCCCCcchhhhHHHHHHHHH-hCCCCCCCCchhHHHHHHHhh
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVLLELL-TGMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DV~S~Gv~l~ell-tG~~P~~~~~~~~~~~~~~~~ 848 (958)
|++..... .....|+..|+|||++. +..++.++|||||||++|||+ +|..|+..... ........
T Consensus 157 g~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~- 223 (262)
T cd05077 157 GIPITVLS-----------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-AEKERFYE- 223 (262)
T ss_pred CCCccccC-----------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHh-
Confidence 99864321 11234788899999986 466888999999999999998 58888764321 11111100
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
... ......+..+.+++.+||+.||++||++.++++.+
T Consensus 224 ---------~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 ---------GQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---------cCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 11122346789999999999999999999999876
No 209
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-35 Score=325.23 Aligned_cols=249 Identities=24% Similarity=0.398 Sum_probs=206.7
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
+|+..+.||.|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|+|++++++++...+..++||||++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 99 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLA 99 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecC
Confidence 5777889999999999999964 789999999876555556778999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++... .+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 100 ~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--- 170 (296)
T cd06655 100 GGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--- 170 (296)
T ss_pred CCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc---
Confidence 99999999643 3899999999999999999999999 99999999999999999999999999875432111
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||............... . ......+
T Consensus 171 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~-------~~~~~~~ 238 (296)
T cd06655 171 ----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-G-------TPELQNP 238 (296)
T ss_pred ----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-C-------CcccCCc
Confidence 112345888999999999888999999999999999999999999765543322211110 0 0011224
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..++..+.+++.+||..||++||++.+++++
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 4566788999999999999999999999964
No 210
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.9e-35 Score=325.72 Aligned_cols=256 Identities=23% Similarity=0.371 Sum_probs=202.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|+..+.||+|+||.||+|.+. ++..||+|.+.... .....++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888899999999999999976 57889999887542 33345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
+++++|.++++.. ..+++..+..++.|+++||.|||+ .+ ++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 9999999999755 348899999999999999999997 46 999999999999999999999999998644211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc-c--------
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM-V-------- 852 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~-~-------- 852 (958)
......|+..|+|||++.+..++.++||||||+++|||++|+.||...... ........... .
T Consensus 154 -------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 225 (308)
T cd06615 154 -------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRP 225 (308)
T ss_pred -------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh-hHHHhhcCccccccccCCccc
Confidence 112346889999999998888999999999999999999999998643321 11110000000 0
Q ss_pred --------------hh----hhcccCCCCC-hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 --------------FS----IIDNRMGSYP-SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 --------------~~----~i~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+ ......+..+ ...+.++.+++.+||..+|++||++++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 226 VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0000011111 1245679999999999999999999999976
No 211
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.5e-35 Score=334.87 Aligned_cols=257 Identities=23% Similarity=0.302 Sum_probs=199.0
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------ 693 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 693 (958)
..++|...+.||+|+||.||+|... .++.||||++... .......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4467888999999999999999875 6889999998754 223345788999999999999999999988643
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
...++||||++ +++.+.+.. .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCccc
Confidence 35799999996 577777743 3788899999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc--
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM-- 851 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~-- 851 (958)
+..... .......||..|+|||++.+..++.++|||||||++|||++|+.||................+.
T Consensus 167 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (355)
T cd07874 167 RTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238 (355)
T ss_pred ccCCCc--------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 754211 1122346899999999999999999999999999999999999999765433222111111000
Q ss_pred ----------chhhhccc----------------C---CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 ----------VFSIIDNR----------------M---GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ----------~~~~i~~~----------------~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+... . ...+......+.+++.+|++.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000 0 00111234578899999999999999999999985
No 212
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=299.76 Aligned_cols=254 Identities=24% Similarity=0.400 Sum_probs=204.9
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh----hc----HHHHHHHHHHHHcc-CCCCcceEEEEEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL----QG----QNEFLTEIKLLSRL-HHRNLVSLLGYCD 691 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~ 691 (958)
..-+.|...+.||.|..++|.+...+ +|..+|+|++..... .. .+.-.+|+.+|+++ .||+|+++.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 34456777789999999999998876 688999998864311 11 23456799999999 6999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeee
Q 002158 692 EEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFG 771 (958)
Q Consensus 692 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 771 (958)
.+...++|+|.|+.|.|.|+|.+.. .+++.+..+|+.|+.+|++|||... |||||+||+|||+|++.++||+|||
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccc
Confidence 9999999999999999999997654 4999999999999999999999999 9999999999999999999999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhcc------CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNV 845 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~ 845 (958)
+|+.++. .......+||++|+|||.+.. ..|+...|+||.||+||-++.|.+||...+.+... +.
T Consensus 169 Fa~~l~~--------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML-R~ 239 (411)
T KOG0599|consen 169 FACQLEP--------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML-RM 239 (411)
T ss_pred eeeccCC--------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH-HH
Confidence 9987643 233456789999999999853 25778999999999999999999999654432211 11
Q ss_pred HhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 846 ARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 846 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... +. ++.- ...-.+......+||.+|++.||.+|-|++|++++
T Consensus 240 Ime-Gk-yqF~----speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 240 IME-GK-YQFR----SPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHh-cc-cccC----CcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 111 10 0000 11124566788999999999999999999999976
No 213
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=302.74 Aligned_cols=252 Identities=23% Similarity=0.357 Sum_probs=202.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++.|+..+.||+|.|+.||+.... .|+.+|+|.+... ...+.+++.+|+++-+.++||||+++.+.+.+.+..|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 345666778999999999999865 7899999977543 2335567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEeeeeeecccc
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVADFGLSRLAP 777 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~DFGla~~~~ 777 (958)
|+|.|++|..-|-.+ ..+++..+-+...||++||.|+|.++ |||||+||+|+++-. .--+||+|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999997666433 34888889999999999999999999 999999999999943 3459999999998664
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
. ......+.||++|||||++...+|+..+|||+-||+||-++.|..||.+.... ........... +.
T Consensus 165 ----~----g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rlye~I~~g~y--d~-- 231 (355)
T KOG0033|consen 165 ----D----GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYEQIKAGAY--DY-- 231 (355)
T ss_pred ----C----ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HHHHHHhcccc--CC--
Confidence 1 23345678999999999999999999999999999999999999999763321 11111111000 00
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+..-+...++..+|+.+|+..||.+|.|+.|.+++
T Consensus 232 --~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 232 --PSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred --CCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 011223556788999999999999999999998864
No 214
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-35 Score=325.77 Aligned_cols=250 Identities=24% Similarity=0.369 Sum_probs=205.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.+|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 57888899999999999999974 78999999987655555667899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++... .+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-- 170 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc--
Confidence 999999999643 3788999999999999999999998 99999999999999999999999999875422111
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
......|++.|+|||.+.+..++.++|||||||++|+|++|..||.............. . .......
T Consensus 171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~-------~~~~~~~ 237 (297)
T cd06656 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-N-------GTPELQN 237 (297)
T ss_pred -----CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-C-------CCCCCCC
Confidence 11234588899999999998899999999999999999999999965432211110000 0 0000122
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+...+..+.+++.+||+.+|++||++++++++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 238 PERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 44566778999999999999999999999974
No 215
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.8e-36 Score=322.55 Aligned_cols=239 Identities=26% Similarity=0.438 Sum_probs=191.9
Q ss_pred ceeeeeCCeEEEEEEECC--------CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 631 TQVGQGGYGKVYKGILSD--------NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+.||+|+||.||+|..+. ...||+|.+........+++.+|+.+++.++|||++++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999998642 234888888765555566889999999999999999999999998999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC--------eEEeeeeeec
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN--------AKVADFGLSR 774 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~--------~kl~DFGla~ 774 (958)
+++|+|.++++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. ++++|||++.
T Consensus 81 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999976543 5889999999999999999999999 999999999999987765 5899999876
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCC-CCCCCCchhHHHHHHHhhcCcc
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGM-QPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~-~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
.... .....++..|+|||++.+. .++.++||||||+++|||++|. .|+...... .......
T Consensus 157 ~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-~~~~~~~----- 219 (258)
T cd05078 157 TVLP-----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-KKLQFYE----- 219 (258)
T ss_pred ccCC-----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-HHHHHHH-----
Confidence 4311 1224578899999999864 5788999999999999999985 555432221 1111111
Q ss_pred hhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 853 FSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.....+.....++.+++.+||+.+|++||+++++++.|
T Consensus 220 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 220 ------DRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ------ccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11123334456789999999999999999999999876
No 216
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.7e-35 Score=322.98 Aligned_cols=253 Identities=26% Similarity=0.370 Sum_probs=206.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.++|++.+.||+|+||.||+|.+. ++..||+|.+........+.|.+|++++++++|+||+++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 346777889999999999999975 6889999999876666667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-- 157 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc--
Confidence 99999999987543 34899999999999999999999999 9999999999999999999999999986542211
Q ss_pred CCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.......|++.|+|||++. ...++.++||||||+++|||++|+.||........... ... ...
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~-~~~----- 225 (280)
T cd06611 158 -----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLK-ILK-SEP----- 225 (280)
T ss_pred -----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHH-Hhc-CCC-----
Confidence 1122345899999999985 34467799999999999999999999975433221111 111 000
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+..++..+.+++.+||+.+|++||++.+++++
T Consensus 226 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 -PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0011234566789999999999999999999999875
No 217
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.6e-35 Score=315.09 Aligned_cols=250 Identities=26% Similarity=0.378 Sum_probs=207.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|+||.||.+... +++.|++|.+... .....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4777889999999999999865 6889999987653 344456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.......+++.++..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99999999998664556899999999999999999999998 99999999999999999999999999976532221
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
......|++.|+|||++.+..++.++||||||+++|||++|..||..... ........ ......
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~---------~~~~~~ 220 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-LNLVVKIV---------QGNYTP 220 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHH---------cCCCCC
Confidence 11234589999999999888889999999999999999999999965332 22221111 111222
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+...+..+.+++.+||+.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 234567789999999999999999999999875
No 218
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.6e-35 Score=334.10 Aligned_cols=256 Identities=22% Similarity=0.290 Sum_probs=198.4
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------C
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------G 694 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 694 (958)
.++|...+.||+|+||.||+|... .++.||||++... .......+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 467888999999999999999975 6889999998753 233345788999999999999999999987543 3
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++||||++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 103 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred eEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 5799999996 578887743 2788899999999999999999999 9999999999999999999999999997
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc--
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV-- 852 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~-- 852 (958)
..... .......||..|+|||++.+..++.++|||||||++|||++|+.||................+..
T Consensus 175 ~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (364)
T cd07875 175 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246 (364)
T ss_pred ccCCC--------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 54211 11223468999999999999999999999999999999999999997654433222211110100
Q ss_pred ----------hhhhcccC-------------------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 ----------FSIIDNRM-------------------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ----------~~~i~~~~-------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........ ..........+.+++.+|++.||.+|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 00011124578899999999999999999999975
No 219
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2e-35 Score=322.34 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=198.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+|+..+.||+|+||.||+|.+. +++.||+|++... ......+|.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5677889999999999999975 6889999998654 3334567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|..+. .+++..+..++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 999997653 2678888999999999999999999 999999999999999999999999998754211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
......|+..|+|||++.+..++.++||||||+++|||++|+.||............. .......+......
T Consensus 149 -----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 220 (279)
T cd06619 149 -----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPL---QLLQCIVDEDPPVL 220 (279)
T ss_pred -----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchH---HHHHHHhccCCCCC
Confidence 1223468999999999999899999999999999999999999996422110000000 00000001111111
Q ss_pred -ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 -PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 -~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+.++.+++.+||+.+|++||+++|++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 12345678999999999999999999999875
No 220
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-35 Score=319.89 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=201.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
++|...+.||+|+||.||+|.+. +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 35566678999999999999975 68899999987655455567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.... .+++.++..++.|++.|++|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--- 160 (267)
T cd06645 89 GGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI--- 160 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc---
Confidence 9999999996543 4899999999999999999999999 9999999999999999999999999987542211
Q ss_pred CccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.......|+..|+|||++. ...++.++|||||||++|||++|..||............... .... ...
T Consensus 161 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~-~~~~----~~~ 231 (267)
T cd06645 161 ----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS-NFQP----PKL 231 (267)
T ss_pred ----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc-CCCC----Ccc
Confidence 1122346899999999984 456888999999999999999999998654322211111110 0000 000
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....++..+.+++.+|++.+|++||++++++++
T Consensus 232 -~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 232 -KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred -cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0011345678999999999999999999998864
No 221
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.4e-35 Score=314.63 Aligned_cols=250 Identities=26% Similarity=0.390 Sum_probs=205.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEe-CCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE-EGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV~E 701 (958)
+|+..+.||+|++|.||++..+ +++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4777889999999999999976 57899999986532 3345578899999999999999999998764 446899999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++.......+++.++..++.|++.|++|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 999999999998655556899999999999999999999999 99999999999999999999999999876532111
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
......|++.|+|||++.+..++.++||||||++++||++|+.||..... ....... ......
T Consensus 158 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-~~~~~~~---------~~~~~~ 220 (257)
T cd08223 158 -------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-NSLVYRI---------IEGKLP 220 (257)
T ss_pred -------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-HHHHHHH---------HhcCCC
Confidence 12234588999999999999999999999999999999999999964332 1211111 111222
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+...+..+.+++.+||+.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 3345677889999999999999999999999864
No 222
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.1e-35 Score=316.25 Aligned_cols=250 Identities=28% Similarity=0.427 Sum_probs=205.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
++|+..+.||+|+||.||+|.+.+ ++.||+|.+..... .+++.+|++++++++|+||+++++++..+...+++|||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 568888899999999999999874 88999999875432 668999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 81 GAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence 9999999996543 35899999999999999999999999 99999999999999999999999999876532211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
......|+..|+|||++.+..++.++||||||+++|||++|+.||............... .......
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~ 221 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--------PPPTLSD 221 (256)
T ss_pred -----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC--------CCCCCCc
Confidence 122345888999999999989999999999999999999999999754332211110000 0001112
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+...+..+.+++.+||+.+|++||++.|++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 222 PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 34456789999999999999999999999863
No 223
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.9e-35 Score=313.89 Aligned_cols=248 Identities=32% Similarity=0.523 Sum_probs=201.3
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHH
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLR 709 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 709 (958)
+.||+|+||.||+|.+.+++.||+|.+...... ....|.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999877999999998765433 4567999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcccee
Q 002158 710 DWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHV 789 (958)
Q Consensus 710 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 789 (958)
+++.... ..+++..+..++.+++.||+|||+++ ++||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-----~~~ 151 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-----TVS 151 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcc-----eec
Confidence 9997543 34789999999999999999999999 99999999999999999999999999875421110 000
Q ss_pred eeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 790 STIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 790 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
.....++..|+|||++.+..++.++||||||+++|||+| |..||......... ..... . .....+...+
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~-~~~~~-~--------~~~~~~~~~~ 221 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR-ERIES-G--------YRMPAPQLCP 221 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH-HHHhc-C--------CCCCCCccCC
Confidence 111224567999999998899999999999999999999 88888654321111 11110 0 0112344567
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
..+.+++.+||+.+|++||++.|+++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 88999999999999999999999999875
No 224
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.7e-35 Score=346.30 Aligned_cols=261 Identities=20% Similarity=0.307 Sum_probs=195.6
Q ss_pred HHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCC------CCcceEEEEE
Q 002158 618 KELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHH------RNLVSLLGYC 690 (958)
Q Consensus 618 ~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~~~~ 690 (958)
+++...+.+|.+.+.||+|+||+||+|.+. .++.||||+++... ...+.+..|+++++.++| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344456678999999999999999999975 57889999986532 223456677777777754 4588999988
Q ss_pred EeC-CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCC-----
Q 002158 691 DEE-GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNL----- 763 (958)
Q Consensus 691 ~~~-~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~----- 763 (958)
..+ +..++|||++ +++|.+++.... .+++..+..++.|++.||+|||++ + ||||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccc
Confidence 764 5789999998 789999886543 489999999999999999999984 7 99999999999998765
Q ss_pred -----------CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCC
Q 002158 764 -----------NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQP 832 (958)
Q Consensus 764 -----------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P 832 (958)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~p 344 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDER----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLL 344 (467)
T ss_pred ccccccCCCCceEEECCCCccccCc----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 49999999875321 112346799999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHhhcCcchh-------------hh---cccCCCC-C--------------hHHHHHHHHHHHHcccc
Q 002158 833 ISHGKNIVREVNVARDSGMVFS-------------II---DNRMGSY-P--------------SECVERFVTLALRCCHD 881 (958)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~-------------~i---~~~~~~~-~--------------~~~~~~l~~li~~cl~~ 881 (958)
|................+.... .. ....... + ......+.+|+.+||+.
T Consensus 345 f~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 424 (467)
T PTZ00284 345 YDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHY 424 (467)
T ss_pred CCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCc
Confidence 9765433221111111010000 00 0000000 0 01134577999999999
Q ss_pred CCCCCCCHHHHHHH
Q 002158 882 KPEHRPSMSDVVRE 895 (958)
Q Consensus 882 dP~~RPs~~evl~~ 895 (958)
||++|||++|++++
T Consensus 425 dP~~R~ta~e~L~H 438 (467)
T PTZ00284 425 DRQKRLNARQMTTH 438 (467)
T ss_pred ChhhCCCHHHHhcC
Confidence 99999999999975
No 225
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-35 Score=342.42 Aligned_cols=256 Identities=24% Similarity=0.268 Sum_probs=196.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..+|.+.+.||+|+||.||+|.+. .++.||||.... ..+.+|++++++++|+||+++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457888899999999999999986 578999996432 2356899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+ .++|.+++.... ..+++.+++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 242 ~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~- 315 (461)
T PHA03211 242 Y-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS- 315 (461)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc-
Confidence 9 579999886543 35999999999999999999999999 99999999999999999999999999986532111
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch-------hHHHHHHHhhcCcc---
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN-------IVREVNVARDSGMV--- 852 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~-------~~~~~~~~~~~~~~--- 852 (958)
........||+.|+|||++.+..++.++|||||||++|||++|..|+..... .....+.....+..
T Consensus 316 ----~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 316 ----TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred ----cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 1112245699999999999999999999999999999999998876543210 01111111110000
Q ss_pred -h--------hhh-----cccCCCCC-------hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 -F--------SII-----DNRMGSYP-------SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 -~--------~~i-----~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ... ........ ......+.+++.+||+.||++|||+.|++++
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 000 00000000 0123468899999999999999999999975
No 226
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.4e-35 Score=319.69 Aligned_cols=249 Identities=31% Similarity=0.497 Sum_probs=199.9
Q ss_pred ceeeeeCCeEEEEEEECC-------CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 631 TQVGQGGYGKVYKGILSD-------NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+.||+|+||.||+|++.+ +..||||.+.... ......|.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998753 2579999886543 23456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC-----CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-----CeEEeeeee
Q 002158 703 VPNGTLRDWLSGRT-----KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-----NAKVADFGL 772 (958)
Q Consensus 703 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-----~~kl~DFGl 772 (958)
+++++|.+++.... ...+++.+++.++.|++.||+|||+.+ ++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 234789999999999999999999998 99999999999999877 899999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGM 851 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~ 851 (958)
++....... ........++..|+|||++.+..++.++||||||+++|||++ |+.||........ ......
T Consensus 158 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~--- 228 (269)
T cd05044 158 ARDIYKSDY-----YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV-LQHVTA--- 228 (269)
T ss_pred ccccccccc-----cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH-HHHHhc---
Confidence 875432111 011112345678999999999999999999999999999998 9999965443221 111111
Q ss_pred chhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 852 VFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 852 ~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
......+...+..+.+++.+||+.+|.+||+++++++.|+
T Consensus 229 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 ------GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ------CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1112234456788999999999999999999999999886
No 227
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-35 Score=353.18 Aligned_cols=259 Identities=20% Similarity=0.322 Sum_probs=203.3
Q ss_pred HHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--C
Q 002158 619 ELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--E 693 (958)
Q Consensus 619 el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~ 693 (958)
+......+|.+.+.||+|+||+||+|.+. .+..||+|.+... .......|..|+.++++++||||+++++++.. .
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 33445568899999999999999999986 5778999988653 23345678999999999999999999998854 3
Q ss_pred CeEEEEEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCC----CCeeccCCCccceEecC------
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAH----PPVFHRDIKASNILLDS------ 761 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~----~~iiH~Dikp~NILl~~------ 761 (958)
...++||||+++|+|.++|.... ...+++..++.|+.||+.||+|||+.+. .+||||||||+|||++.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 56899999999999999997532 2458999999999999999999998542 34999999999999964
Q ss_pred -----------CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHh
Q 002158 762 -----------NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLT 828 (958)
Q Consensus 762 -----------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~ellt 828 (958)
.+.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 2358999999997542211 1223569999999999864 458889999999999999999
Q ss_pred CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 829 GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 829 G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
|+.||.........+....... .......+..+.+||..||+.+|.+||++.|++++
T Consensus 239 Gk~PF~~~~~~~qli~~lk~~p----------~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 239 GKTPFHKANNFSQLISELKRGP----------DLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CCCCCCcCCcHHHHHHHHhcCC----------CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 9999976554433332221110 00112345778999999999999999999999854
No 228
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.5e-35 Score=315.90 Aligned_cols=252 Identities=27% Similarity=0.434 Sum_probs=200.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-----hhcHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-----LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 696 (958)
.+|...+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888899999999999999975 58899999876432 2234568899999999999999999998865 3578
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
+++|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 89999999999999997543 3888999999999999999999998 999999999999999999999999998755
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
....... .......|+.+|+|||++.+..++.++|||||||++|||++|+.||........... ...
T Consensus 157 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~-~~~-------- 223 (266)
T cd06651 157 QTICMSG----TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK-IAT-------- 223 (266)
T ss_pred ccccccC----CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH-Hhc--------
Confidence 3211110 111234588999999999988899999999999999999999999975433222211 110
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......+....+.+..++ +||..+|++||+++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 224 QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 0111233555667777887 6888999999999999863
No 229
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.1e-35 Score=322.13 Aligned_cols=252 Identities=26% Similarity=0.389 Sum_probs=203.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+.|+..+.||+|+||.||+|.+. +++.||+|.+........+.+.+|+++++.++|+|++++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45777889999999999999986 58899999998776666778999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|..++.+.. ..+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~---- 163 (292)
T cd06644 92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT---- 163 (292)
T ss_pred CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc----
Confidence 9999998886443 34899999999999999999999998 999999999999999999999999988643211
Q ss_pred CccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
........++..|+|||++. ...++.++|||||||++|||++|..||........... ..... .
T Consensus 164 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~-------~ 232 (292)
T cd06644 164 ---LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSE-------P 232 (292)
T ss_pred ---ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHH-HhcCC-------C
Confidence 11112345888999999985 34467899999999999999999999965432211111 11100 0
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+..++..+.+++.+||+.+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 233 PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0111234556788999999999999999999999864
No 230
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.2e-35 Score=319.76 Aligned_cols=260 Identities=27% Similarity=0.456 Sum_probs=207.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCc----EEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNT----TVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.+|...+.||+|+||+||+|.++ +|+ .||+|...... .....++.+|+.++++++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 45677789999999999999975 333 58999887653 3345678999999999999999999999987 78999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++|+|.+++..... .+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 9999999999999976433 4899999999999999999999988 99999999999999999999999999986542
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.... .......++..|+|||.+....++.++||||||+++||+++ |+.||..... .........
T Consensus 162 ~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~--------- 226 (279)
T cd05057 162 DEKE-----YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-VEIPDLLEK--------- 226 (279)
T ss_pred cccc-----eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-HHHHHHHhC---------
Confidence 2111 11112224578999999988889999999999999999999 9999965432 111111111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
......+..++..+.+++.+||..+|.+||++.++++.|+++.+..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 227 GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 11112233455778999999999999999999999999999876443
No 231
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.7e-35 Score=316.90 Aligned_cols=251 Identities=27% Similarity=0.401 Sum_probs=191.8
Q ss_pred eeeeeCCeEEEEEEECC---CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 632 QVGQGGYGKVYKGILSD---NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
.||+|+||+||+|...+ ...||+|.+.... ......|.+|+++++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 4578888876543 3334578999999999999999999999999999999999999999
Q ss_pred HHHHhccCCC---CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 708 LRDWLSGRTK---ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 708 L~~~l~~~~~---~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
|.+++..... ...++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999975432 23567888999999999999999999 99999999999999999999999999864322110
Q ss_pred ccceeeeeccCCCCccChhhhcc-------CCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
........++..|+|||++.. ..++.++|||||||++|||++ |..||............... . .....
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~-~~~~~ 231 (269)
T cd05042 156 --YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE-Q-DIKLP 231 (269)
T ss_pred --eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc-c-CccCC
Confidence 011122346678999999753 356779999999999999999 78888654432221111111 1 00110
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.+..+..++..+.+++..|| .||++||++++|++.|
T Consensus 232 ---~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 232 ---KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred ---CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 12234456677888999999 5999999999999876
No 232
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.4e-35 Score=317.83 Aligned_cols=253 Identities=31% Similarity=0.517 Sum_probs=200.6
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHH--HHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQN--EFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
|+..+.||+|+||+||++... +++.||+|++......... ...+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 345689999999999999987 4678999999876544432 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.. ...+++.++..++.|+++||+|||+.+ |+|+||||+||++++++.++|+|||.+.....
T Consensus 81 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~----- 150 (260)
T PF00069_consen 81 PGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSE----- 150 (260)
T ss_dssp TTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTS-----
T ss_pred ccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-----
Confidence 99999999973 234899999999999999999999999 99999999999999999999999999875311
Q ss_pred CccceeeeeccCCCCccChhhhc-cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.........++..|+|||++. +..++.++||||+|+++|+|++|..||..................... ... .
T Consensus 151 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~-~ 224 (260)
T PF00069_consen 151 --NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLP---SSS-Q 224 (260)
T ss_dssp --TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHH---HHT-T
T ss_pred --cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccc---ccc-c
Confidence 012233456899999999998 788999999999999999999999999865211111111111000000 000 0
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........+.+++.+||+.||++||++.+++++
T Consensus 225 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 225 QSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011123789999999999999999999999863
No 233
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.6e-35 Score=315.03 Aligned_cols=250 Identities=32% Similarity=0.534 Sum_probs=202.6
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+|+..+.||+|+||.||+|.+.+++.+|+|.+..... ...+|.+|++++++++|||++++++++......++||||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 5666789999999999999987788999999875432 345789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
++|.+++.... ..++++.+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~----- 154 (256)
T cd05112 84 GCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ----- 154 (256)
T ss_pred CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCc-----
Confidence 99999997543 34789999999999999999999999 9999999999999999999999999987542111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
........++.+|+|||++.+..++.++||||||+++|||++ |..||..... ......... + .....+
T Consensus 155 -~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~-~--------~~~~~~ 223 (256)
T cd05112 155 -YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-SEVVETINA-G--------FRLYKP 223 (256)
T ss_pred -ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHHhC-C--------CCCCCC
Confidence 111112335678999999998889999999999999999998 9999864332 111111111 0 011112
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
...+..+.+++.+||+.+|++||++.+++++|
T Consensus 224 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 33467899999999999999999999999876
No 234
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.5e-35 Score=315.12 Aligned_cols=250 Identities=24% Similarity=0.370 Sum_probs=207.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|+||.||++... +++.||+|.+... .....+++.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4677889999999999999975 6889999998643 233456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.......+++.++..++.|++.|++|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 99999999997655455889999999999999999999998 9999999999999999999999999987543211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.......|++.|+|||++.+..++.++||||||++++||++|+.||...... ..+.. ++......
T Consensus 156 -----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~~---------~~~~~~~~ 220 (256)
T cd08218 156 -----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-NLVLK---------IIRGSYPP 220 (256)
T ss_pred -----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-HHHHH---------HhcCCCCC
Confidence 1112345888999999999888999999999999999999999999754332 11111 11122223
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+...+..+.+++.+||+.+|++||++.+|+++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 221 VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 345567889999999999999999999999974
No 235
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-36 Score=332.13 Aligned_cols=244 Identities=24% Similarity=0.437 Sum_probs=198.5
Q ss_pred CceeeeeCCeEEEEEEEC-CCcEEEE---EEecc-CChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe--EEEEEEe
Q 002158 630 STQVGQGGYGKVYKGILS-DNTTVAI---KRAEE-GSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE--QMLVYEF 702 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-~~~~vav---K~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--~~lV~E~ 702 (958)
...||+|+|-+||||.+. +|-.||- |.-+. .+....++|..|+++|+.|+|+||++++.++.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 347999999999999985 5777773 32211 244556789999999999999999999999977654 7899999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~~~~~ 781 (958)
+..|+|+.|+++.++ ++...+..|+.||++||.|||++. |||||||||.+||+|+. -|.|||+|.|+|.....
T Consensus 125 ~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~--- 198 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK--- 198 (632)
T ss_pred ccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhc---
Confidence 999999999987655 788899999999999999999975 89999999999999975 48999999999987632
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.....+.|||.|||||++. ..|+..+||||||+.|+||+|+..||..-.+..+.++.... |......
T Consensus 199 ------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S-GiKP~sl----- 265 (632)
T KOG0584|consen 199 ------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS-GIKPAAL----- 265 (632)
T ss_pred ------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc-CCCHHHh-----
Confidence 1223478999999999986 77999999999999999999999999877776666554332 2111111
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..--..++.++|.+|+.. ..+|||+.|+++.
T Consensus 266 --~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 266 --SKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred --hccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 111135789999999999 9999999999864
No 236
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.6e-35 Score=315.57 Aligned_cols=247 Identities=30% Similarity=0.492 Sum_probs=201.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
..|...+.||+|+||.||+|.. .++.||+|.+.... ....+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 3577788999999999999975 67889999986542 245789999999999999999999998765 4799999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++.......+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC----
Confidence 999999998665556899999999999999999999998 9999999999999999999999999987532111
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.....+..|+|||++.+..++.++||||||+++|||++ |+.||...... ...... ..+ .....
T Consensus 155 ------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~~-~~~--------~~~~~ 218 (254)
T cd05083 155 ------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-EVKECV-EKG--------YRMEP 218 (254)
T ss_pred ------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-HHHHHH-hCC--------CCCCC
Confidence 11234567999999998899999999999999999998 99998654321 111111 111 11122
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
+..++..+.+++.+||+.+|++||+++++++.|++
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 34567889999999999999999999999998764
No 237
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.1e-35 Score=314.62 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=207.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
++|...+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++...+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 56788899999999999999975 57889999998765556678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||++.......
T Consensus 83 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 155 (262)
T cd06613 83 GGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--- 155 (262)
T ss_pred CCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh---
Confidence 9999999997542 34889999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccceeeeeccCCCCccChhhhccC---CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.......|+..|+|||.+... .++.++||||||+++|||++|+.||............... .. ....
T Consensus 156 ----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~-~~-----~~~~ 225 (262)
T cd06613 156 ----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS-NF-----PPPK 225 (262)
T ss_pred ----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-cC-----CCcc
Confidence 111234688899999999777 7889999999999999999999999764432222111111 00 0001
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
...+...+.++.+++.+||..+|.+||++.+++.
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1123456778999999999999999999999985
No 238
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.8e-35 Score=319.10 Aligned_cols=259 Identities=26% Similarity=0.354 Sum_probs=200.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|...+.||+|++|.||+|+.. ++..||||++.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 3677789999999999999976 68999999986532 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC-CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRT-KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
++ ++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 96 68999886543 256899999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch-------
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF------- 853 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~------- 853 (958)
.......+++.|+|||++.+. .++.++||||||+++|||+||+.||................+...
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 156 ------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred ------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 111223478899999998754 468899999999999999999999976544322221111100000
Q ss_pred -------hhhc----ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 -------SIID----NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 -------~~i~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.... ..........+.++.+++.+||+.||++||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000 00001112346778899999999999999999999863
No 239
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.7e-35 Score=335.05 Aligned_cols=256 Identities=23% Similarity=0.332 Sum_probs=199.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||+|+||+||+|..+ +++.||+|++.... ......+.+|++++..++|+||+++++++.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36778899999999999999976 68999999986432 223456888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 9999999999997543 4899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCC----------------------------ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCC
Q 002158 781 DEGT----------------------------MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQP 832 (958)
Q Consensus 781 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P 832 (958)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0000 000011235799999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHhhcCcchhhhcccCCCCCh--HHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 002158 833 ISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS--ECVERFVTLALRCCHDKPEHRPS---MSDVVRE 895 (958)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 895 (958)
|......... ........ ...+|. ..+.++.+++.+++ .||.+|++ +.|++++
T Consensus 236 f~~~~~~~~~-~~i~~~~~--------~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 236 FCSETPQETY-RKVMNWKE--------TLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCHHHHH-HHHHcCCC--------ceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 9754432221 11111000 001111 24567788888866 49999985 6666654
No 240
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=325.27 Aligned_cols=252 Identities=24% Similarity=0.359 Sum_probs=211.2
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh---cHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ---GQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 697 (958)
....|+..+.||+|.||.||+++.+ +|+.+|+|.+.+.... ......+|+++|+++. |||||.+++++++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3456777789999999999999987 4999999999765443 3457889999999998 999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC----CCeEEeeeeee
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN----LNAKVADFGLS 773 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~----~~~kl~DFGla 773 (958)
+|||++.||.|.+.+... .+++..+..++.|++.|++|||+.| |+|||+||+|+|+... +.+|++|||++
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 999999999999999766 3999999999999999999999999 9999999999999543 57999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||.+..............-
T Consensus 187 ~~~~~--------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--- 255 (382)
T KOG0032|consen 187 KFIKP--------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--- 255 (382)
T ss_pred eEccC--------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC---
Confidence 87633 2234567899999999999999999999999999999999999999986554333222111110
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ....-......+.+++..++..||.+|+++.+++++
T Consensus 256 ~f----~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 DF----TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CC----CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 00 012234567889999999999999999999999996
No 241
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.9e-35 Score=320.51 Aligned_cols=260 Identities=26% Similarity=0.415 Sum_probs=207.5
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEe
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDE 692 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 692 (958)
.++.++......|+..+.||+|+||.||+|.+. +++.||+|.+.... ....++..|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 456666667788999999999999999999975 68899999886543 3345688999999999 79999999999853
Q ss_pred ------CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeE
Q 002158 693 ------EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAK 766 (958)
Q Consensus 693 ------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~k 766 (958)
....++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence 457899999999999999997655556888899999999999999999999 99999999999999999999
Q ss_pred EeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHH
Q 002158 767 VADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVR 841 (958)
Q Consensus 767 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~ 841 (958)
|+|||+++...... .......|+..|+|||.+. ...++.++|||||||++|||++|..||........
T Consensus 162 l~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~ 234 (282)
T cd06636 162 LVDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA 234 (282)
T ss_pred EeeCcchhhhhccc-------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh
Confidence 99999987542211 1112345889999999986 34578899999999999999999999975433222
Q ss_pred HHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 842 EVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 842 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
....... .........++..+.+++.+||+.||.+||++.|+++
T Consensus 235 ~~~~~~~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 LFLIPRN---------PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhhHhhC---------CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1110000 0011112346678999999999999999999999986
No 242
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.8e-35 Score=318.58 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=204.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
++|.....||+|+||+||+|+.+ +.+.|++|.+...... ..+++.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56788889999999999999964 2467999988764433 4567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCC-------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeee
Q 002158 698 LVYEFVPNGTLRDWLSGRTK-------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADF 770 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DF 770 (958)
+||||+++|+|.++++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999975441 25899999999999999999999999 999999999999999999999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhc
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDS 849 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~ 849 (958)
|+++...... ........++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..+.....
T Consensus 162 ~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~- 233 (275)
T cd05046 162 SLSKDVYNSE------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQA- 233 (275)
T ss_pred ccccccCccc------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-HHHHHHHc-
Confidence 9986432111 111122345678999999988888999999999999999999 78888643321 11111111
Q ss_pred CcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 850 GMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 850 ~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
+.. ....+..++..+.+++.+||+.+|++||++.|+++.|+
T Consensus 234 ~~~-------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 GKL-------ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCc-------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 100 01123346678999999999999999999999998875
No 243
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.1e-34 Score=314.03 Aligned_cols=252 Identities=25% Similarity=0.398 Sum_probs=201.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-----hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-----LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 696 (958)
++|...+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46788899999999999999975 58999999875321 22345788999999999999999999998663 467
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++++|.+++.... .+++..+.+++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999997543 3788889999999999999999999 999999999999999999999999998754
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
...... ........|+..|+|||++.+..++.++||||||+++|||++|+.||..............
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~--------- 223 (265)
T cd06652 157 QTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT--------- 223 (265)
T ss_pred cccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---------
Confidence 321111 1111234588999999999888899999999999999999999999975433322211110
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......|......+.+++.+|+. +|++||+++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 224 QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 111233455667788899999994 99999999999864
No 244
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.3e-35 Score=321.22 Aligned_cols=266 Identities=27% Similarity=0.453 Sum_probs=206.6
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-----CCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-----DNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQM 697 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~ 697 (958)
.|...+.||+|+||.||+|.+. .+..||||.+...... ..+.|.+|+++++.++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 5666789999999999999864 3678999999865443 45679999999999999999999999877 55789
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 85 lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999999997544 24899999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc----Ccch
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS----GMVF 853 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~----~~~~ 853 (958)
..... ........++..|+|||.+.+..++.++||||||+++|||++|..|+................ ....
T Consensus 161 ~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 161 EDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 22111 111112335567999999998899999999999999999999999986432211000000000 0000
Q ss_pred hhhccc-CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 854 SIIDNR-MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 854 ~~i~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
..+... ....+..++.++.+++.+||+.+|++||++.|++++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111111 1122345668899999999999999999999999999875
No 245
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=316.04 Aligned_cols=246 Identities=24% Similarity=0.361 Sum_probs=208.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc--HHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG--QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
-|...+.||+|.|+.|-.|++- .|..||||++.+..... ...+..|+++|+-++|||||++|.+......+|||+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 3555678999999999999865 79999999998754333 34688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-CCCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD-SNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla~~~~~~~~ 781 (958)
-++|+|+|||-... ..+.+.-+.+++.||..|+.|+|+.+ +|||||||+||.+- .-|-+||.|||++-.+..
T Consensus 99 GD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P--- 171 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP--- 171 (864)
T ss_pred cCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCC---
Confidence 99999999997554 34999999999999999999999999 99999999999774 568999999999865532
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCC-cchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.......+|+..|-|||++.+..|+. ++||||+||+||.|++|+.||....+. +.+..++| .-
T Consensus 172 -----G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----------ETLTmImD-CK 235 (864)
T KOG4717|consen 172 -----GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----------ETLTMIMD-CK 235 (864)
T ss_pred -----cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----------hhhhhhhc-cc
Confidence 33455678999999999999999985 899999999999999999999754332 12222222 23
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
...|.....+..+||..|+..||++|.+.+||+.
T Consensus 236 YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 236 YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 4568889999999999999999999999999985
No 246
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-35 Score=320.53 Aligned_cols=253 Identities=23% Similarity=0.377 Sum_probs=201.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEecc--CChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEE--GSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E 701 (958)
..|++.++||+||.++||++...+.+.||+|++.. .+.+....|..|++.|.+++ |.+||++++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 35677789999999999999988889999997654 34455677999999999994 9999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|= ..+|..+|+.+......| .+..+..||+.|+.++|++| |||.||||.|+|+- .|.+||+|||+|........
T Consensus 441 ~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred cc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence 86 679999998877654555 78889999999999999999 99999999999995 68999999999987643322
Q ss_pred CCCccceeeeeccCCCCccChhhhccCC-----------CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHK-----------LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
.-.....+||+.||+||.+.... .++++||||+||+||+|+-|+.||..-.+....+....+.+
T Consensus 515 -----sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~ 589 (677)
T KOG0596|consen 515 -----SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPN 589 (677)
T ss_pred -----ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCC
Confidence 22334568999999999996443 55799999999999999999999975444333332222211
Q ss_pred cchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 851 MVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 851 ~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... ..+..+.. .++.++++.|+..||++||+..|++++
T Consensus 590 ~~I-----efp~~~~~--~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 590 HEI-----EFPDIPEN--DELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccc-----cccCCCCc--hHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 100 11222322 238999999999999999999999975
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=9.4e-35 Score=316.64 Aligned_cols=247 Identities=26% Similarity=0.416 Sum_probs=205.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|++++++++|+||+++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4666788999999999999976 58899999987543 344567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++... .+++.++..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06640 85 GGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc---
Confidence 999999999643 3888999999999999999999998 9999999999999999999999999987543211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.......++..|+|||++.+..++.++||||||+++|||++|..||.......... . .........
T Consensus 156 ----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-~---------~~~~~~~~~ 221 (277)
T cd06640 156 ----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-L---------IPKNNPPTL 221 (277)
T ss_pred ----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-h---------hhcCCCCCC
Confidence 11223458889999999998889999999999999999999999997543221110 0 001112334
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+..++..+.+++.+||+.+|++||++++++++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 222 TGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred chhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 55778899999999999999999999999876
No 248
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.7e-35 Score=312.68 Aligned_cols=248 Identities=28% Similarity=0.487 Sum_probs=204.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-----hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-----LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+|...+.||+|+||.||+|... +++.|++|.+.... ....+.+.+|+++++.++|+||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3666789999999999999987 78999999876532 22346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++++|.+++.... .+++..+..++.|++.|++|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999997543 4889999999999999999999999 999999999999999999999999998764321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
. ......|+..|+|||.+.... ++.++|+||||+++|||++|+.||.............. ..
T Consensus 156 ~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---------~~ 218 (258)
T cd06632 156 S--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR---------SK 218 (258)
T ss_pred c--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh---------cc
Confidence 1 122345889999999997766 88999999999999999999999975443222111110 01
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+...+..+.+++.+||+.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 219 ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1223345567888999999999999999999999863
No 249
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=329.91 Aligned_cols=251 Identities=25% Similarity=0.399 Sum_probs=208.8
Q ss_pred CCCCCceeeeeCCeEEEEEEECCC-cEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDN-TTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
.|.++..||.|+||.||+|..++. -..|.|++...+....++|+-|+++|+...||+||++++.|..++.++++.|||+
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 455566799999999999998753 4456788888788888899999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
||-++..+-.-+ ..+++.++.-++.|++.||.|||++. |||||||+.|||++-+|.++|+|||.+....
T Consensus 113 GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~------- 181 (1187)
T KOG0579|consen 113 GGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNK------- 181 (1187)
T ss_pred CchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccch-------
Confidence 999998886543 34999999999999999999999999 9999999999999999999999999875321
Q ss_pred ccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
........+.||+.|||||+.+ ..+|++++||||||++|.||..+.+|...-..+...+...... +.
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe--------PP 253 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--------PP 253 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC--------CC
Confidence 1122334678999999999985 4579999999999999999999999987554433333222211 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
-.-.|..+...+.+++.+|+..||+.||++++++++
T Consensus 254 TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 254 TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 122477889999999999999999999999999864
No 250
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.8e-35 Score=322.38 Aligned_cols=263 Identities=24% Similarity=0.395 Sum_probs=205.8
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEE-
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCD- 691 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~- 691 (958)
+.+..+..+.++|+..+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++++ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 344556667889999999999999999999975 68899999876532 2235688899999999 6999999999884
Q ss_pred ----eCCeEEEEEEecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 692 ----EEGEQMLVYEFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 692 ----~~~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
.++..++||||+++++|.++++.. ....+++..+..++.|+++||.|||+.+ |+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 345789999999999999988632 2345889999999999999999999998 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIV 840 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~ 840 (958)
||+|||+++...... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||.......
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~ 236 (286)
T cd06638 164 KLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR 236 (286)
T ss_pred EEccCCceeecccCC-------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH
Confidence 999999987543211 11123458999999999853 447889999999999999999999997654322
Q ss_pred HHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 841 REVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 841 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
....... ... . ....+..++..+.+++.+||+.||++||++.|++++.
T Consensus 237 ~~~~~~~--~~~-----~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 237 ALFKIPR--NPP-----P-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHhhccc--cCC-----C-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 2211100 000 0 0011233456799999999999999999999999753
No 251
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.1e-35 Score=326.81 Aligned_cols=255 Identities=25% Similarity=0.353 Sum_probs=202.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-C-----CCcceEEEEEEeCCeEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-H-----RNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~~~~~~~~~~~l 698 (958)
+|.+.+.||+|+||.|-+|.+. +++.||||+++... .-..+-..|+.+|..++ | -|+|++++|+...++.+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7888999999999999999975 69999999998743 23345678999999996 3 579999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC--CCeEEeeeeeeccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN--LNAKVADFGLSRLA 776 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~--~~~kl~DFGla~~~ 776 (958)
|+|.+ .-+|+++|+......++...+..++.||+.||.+||+.+ |||+||||+|||+.+. ..+||+|||.|+..
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 579999999888888999999999999999999999999 9999999999999654 36999999999864
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC------
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG------ 850 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~------ 850 (958)
.. .. .....+..|+|||++.+.+|+.+.|||||||++.||++|.+-|.+.....+......--+
T Consensus 342 ~q---------~v-ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 342 SQ---------RV-YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKM 411 (586)
T ss_pred CC---------cc-eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 21 11 144577889999999999999999999999999999999766655443322211111000
Q ss_pred --------cchhh-----------------------------hcccC-C--------CCChHHHHHHHHHHHHccccCCC
Q 002158 851 --------MVFSI-----------------------------IDNRM-G--------SYPSECVERFVTLALRCCHDKPE 884 (958)
Q Consensus 851 --------~~~~~-----------------------------i~~~~-~--------~~~~~~~~~l~~li~~cl~~dP~ 884 (958)
..++. .+... + ..+......+.+++++|++.||.
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 00000 00000 0 01113456789999999999999
Q ss_pred CCCCHHHHHHH
Q 002158 885 HRPSMSDVVRE 895 (958)
Q Consensus 885 ~RPs~~evl~~ 895 (958)
+|+|..|++++
T Consensus 492 ~R~tp~qal~H 502 (586)
T KOG0667|consen 492 ERITPAQALNH 502 (586)
T ss_pred hcCCHHHHhcC
Confidence 99999999986
No 252
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=6.2e-35 Score=317.52 Aligned_cols=247 Identities=27% Similarity=0.413 Sum_probs=204.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+|+..+.||.|+||.||+|.+. +++.||+|.+.... ......+.+|+++++.++|+|++++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5677789999999999999976 68899999987543 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++... .+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||+++......
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 152 (274)
T cd06609 82 GGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--- 152 (274)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc---
Confidence 999999999754 5899999999999999999999999 9999999999999999999999999998654321
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.......|+..|+|||++.+..++.++||||||+++|||++|+.||......... .... .......
T Consensus 153 ----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~-~~~~---------~~~~~~~ 218 (274)
T cd06609 153 ----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL-FLIP---------KNNPPSL 218 (274)
T ss_pred ----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH-HHhh---------hcCCCCC
Confidence 1122345888999999999988999999999999999999999999654322111 1100 0111122
Q ss_pred ChH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSE-CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+.. ++..+.+++.+||..+|++||++++++++
T Consensus 219 ~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 219 EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred cccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 222 56789999999999999999999999874
No 253
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.1e-35 Score=321.46 Aligned_cols=259 Identities=28% Similarity=0.469 Sum_probs=203.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCc----EEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNT----TVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
.++|...+.||+|+||.||+|.+. ++. .||+|.+.... .....++.+|+.+++.++||||++++++|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 345677889999999999999874 343 57889886543 23345788999999999999999999998754 567
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+++||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence 9999999999999997543 34889999999999999999999998 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
..... .......++..|+|||++.+..++.++||||||+++|||++ |..||..... ....... ..+.
T Consensus 161 ~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-~~~~~~~-~~~~----- 228 (303)
T cd05110 161 GDEKE-----YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-REIPDLL-EKGE----- 228 (303)
T ss_pred Ccccc-----cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH-HCCC-----
Confidence 22111 11122345778999999998999999999999999999998 8899864321 1111111 1110
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
....+..++..+.+++.+||..+|++||+++++++.|+++.+.
T Consensus 229 ---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 229 ---RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1112234556789999999999999999999999999987544
No 254
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.5e-35 Score=321.23 Aligned_cols=246 Identities=26% Similarity=0.418 Sum_probs=201.7
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++..+...++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 445567999999999999875 57899999987543 3345678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++... .+++..+..++.|+++|+.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 86 ~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06642 86 GGSALDLLKPG---PLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred CCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc----
Confidence 99999998643 4889999999999999999999998 9999999999999999999999999987543211
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
.......|+..|+|||++.+..++.++||||||+++|||++|+.|+.......... . .........+
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-~---------~~~~~~~~~~ 222 (277)
T cd06642 156 ---IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-L---------IPKNSPPTLE 222 (277)
T ss_pred ---hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-h---------hhcCCCCCCC
Confidence 11123458889999999999889999999999999999999999986433211110 0 1111122234
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..++..+.+++.+||+.+|++||++.+++++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 4567789999999999999999999999985
No 255
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.4e-35 Score=320.46 Aligned_cols=258 Identities=25% Similarity=0.346 Sum_probs=203.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|+..+.||+|+||+||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45666778999999999999976 58899999876543 33456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
+++++|.+++.... .+++..+..++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~-- 157 (284)
T cd06620 85 MDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS-- 157 (284)
T ss_pred CCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh--
Confidence 99999999987543 48999999999999999999997 46 999999999999999999999999998643211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh-hcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR-DSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~-~~~~~~~~i~~~~ 860 (958)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.............. ........+....
T Consensus 158 -------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd06620 158 -------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP 230 (284)
T ss_pred -------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC
Confidence 11234689999999999888899999999999999999999999975332100000000 0000111111112
Q ss_pred CCCCh-HHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 861 GSYPS-ECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 861 ~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
...+. .++..+.+++.+||+.||++||++.|++++.
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 231 PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 22222 3677899999999999999999999999863
No 256
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.1e-35 Score=329.84 Aligned_cols=256 Identities=23% Similarity=0.337 Sum_probs=197.4
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------ 693 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 693 (958)
..++|...+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++|+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4567888999999999999999975 68899999987542 22345678999999999999999999987543
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
...+++||++ +++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccc
Confidence 3578999998 78999988643 3899999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
+.... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||................+..
T Consensus 166 ~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd07878 166 RQADD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTP 235 (343)
T ss_pred eecCC----------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 75421 1123468999999999977 568889999999999999999999997544322111111100000
Q ss_pred -hhhh-----------cccCCCCC--------hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 -FSII-----------DNRMGSYP--------SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 -~~~i-----------~~~~~~~~--------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+.. ...+...+ ......+.+++.+|++.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 236 SPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 00011111 1123457899999999999999999999975
No 257
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2e-35 Score=330.43 Aligned_cols=239 Identities=22% Similarity=0.308 Sum_probs=188.5
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHcc---CCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRL---HHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
||+|+||+||+|... +++.||||++..... .....+..|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999976 689999999864321 2233456677777665 699999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~----- 150 (330)
T cd05586 81 GELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN----- 150 (330)
T ss_pred ChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-----
Confidence 99999997543 4899999999999999999999999 9999999999999999999999999987432111
Q ss_pred cceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
.......||..|+|||++.+. .++.++||||+||++|||++|+.||..... ........... . .++
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-~~~~~~i~~~~---------~-~~~ 217 (330)
T cd05586 151 --KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-QQMYRNIAFGK---------V-RFP 217 (330)
T ss_pred --CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-HHHHHHHHcCC---------C-CCC
Confidence 112345699999999999765 478999999999999999999999975432 12111111100 0 111
Q ss_pred -hHHHHHHHHHHHHccccCCCCCC----CHHHHHH
Q 002158 865 -SECVERFVTLALRCCHDKPEHRP----SMSDVVR 894 (958)
Q Consensus 865 -~~~~~~l~~li~~cl~~dP~~RP----s~~evl~ 894 (958)
...+..+.+++.+||+.||++|| ++.++++
T Consensus 218 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 23457788999999999999998 4666655
No 258
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.1e-35 Score=324.73 Aligned_cols=196 Identities=30% Similarity=0.393 Sum_probs=160.5
Q ss_pred CceeeeeCCeEEEEEEEC---CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEEEEEEecC
Q 002158 630 STQVGQGGYGKVYKGILS---DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQMLVYEFVP 704 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~E~~~ 704 (958)
.++||+|+||+||+|..+ +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999965 46789999987543 23457789999999999999999999854 456899999995
Q ss_pred CCCHHHHhccC-------CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe----cCCCCeEEeeeeee
Q 002158 705 NGTLRDWLSGR-------TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL----DSNLNAKVADFGLS 773 (958)
Q Consensus 705 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl----~~~~~~kl~DFGla 773 (958)
++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 6898887532 1234889999999999999999999999 9999999999999 45678999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCC
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISH 835 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~ 835 (958)
+....... +........||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 160 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 86532111 11122345689999999999774 588899999999999999999999964
No 259
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.5e-35 Score=320.70 Aligned_cols=251 Identities=25% Similarity=0.423 Sum_probs=203.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+|+..+.||+|+||.||+|.++ ++..||+|.+... .......+.+|++++++++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5677889999999999999986 7899999988754 3334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCC-CCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 704 PNGTLRDWLSGRT-KENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 704 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
++++|.++++... ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 9999999987532 23589999999999999999999974 6 999999999999999999999999998754211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCC------CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
......|+..|+|||++.+.. ++.++|||||||++|||++|+.||....... .... ...+
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~------~~~~ 222 (286)
T cd06622 157 -------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQ------LSAI 222 (286)
T ss_pred -------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHH------HHHH
Confidence 112235788999999986543 4789999999999999999999996432211 1110 0111
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........+..++..+.+++.+||+.+|++||++++++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 2222234456678889999999999999999999999974
No 260
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.9e-35 Score=321.25 Aligned_cols=246 Identities=24% Similarity=0.379 Sum_probs=200.8
Q ss_pred CCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 629 SSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 3457999999999999975 688999999876555556678999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccc
Q 002158 708 LRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPT 787 (958)
Q Consensus 708 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 787 (958)
|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 106 L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~------ 173 (292)
T cd06658 106 LTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------ 173 (292)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc------
Confidence 99998543 3889999999999999999999998 99999999999999999999999999875422111
Q ss_pred eeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHH
Q 002158 788 HVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSEC 867 (958)
Q Consensus 788 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 867 (958)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||........ ...... ...... ......
T Consensus 174 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~------~~~~~~-~~~~~~ 244 (292)
T cd06658 174 -KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-MRRIRD------NLPPRV-KDSHKV 244 (292)
T ss_pred -cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHh------cCCCcc-cccccc
Confidence 11234588999999999888899999999999999999999999975443221 111110 000111 111234
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 868 VERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 868 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+..+.+++.+||..||.+||+++|++++
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 5678899999999999999999999975
No 261
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-35 Score=332.39 Aligned_cols=254 Identities=20% Similarity=0.293 Sum_probs=193.2
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
...+|...+.||+|+||.||+|.+. +++.||+|+.... ....|+.++++++|+||+++++++...+..++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4457999999999999999999986 5788999975432 23469999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+ .++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 138 ~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~--- 209 (357)
T PHA03209 138 HY-SSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVV--- 209 (357)
T ss_pred cc-CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCcccccccc---
Confidence 99 578999886543 35899999999999999999999999 99999999999999999999999999874321
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhH---------HHHH-HHhhcCc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIV---------REVN-VARDSGM 851 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~---------~~~~-~~~~~~~ 851 (958)
........||..|+|||++.+..++.++|||||||++|||+++..|+....... ..+. .....+.
T Consensus 210 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~ 284 (357)
T PHA03209 210 -----APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKV 284 (357)
T ss_pred -----CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhcc
Confidence 111224569999999999999999999999999999999999666553221100 0000 0000000
Q ss_pred c-------------hhhhcc-cCC--CC-------ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 V-------------FSIIDN-RMG--SY-------PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ~-------------~~~i~~-~~~--~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ...++. ... .. ....+....+++.+||+.||++|||+.|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 285 HPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred ChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0 000000 000 00 01234456679999999999999999999975
No 262
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-34 Score=312.16 Aligned_cols=249 Identities=26% Similarity=0.386 Sum_probs=205.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|+||.||+|... +++.||||.+.... ......+.+|++++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4677889999999999999975 68899999986542 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla~~~~~~~~ 781 (958)
+++++|.+++.......+++..+.+++.|+++||+|||+++ ++||||||+||+++++ +.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999998765556899999999999999999999998 9999999999999865 458999999987653211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ....... .....
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~---------~~~~~ 219 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-ALVLKIM---------SGTFA 219 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-HHHHHHH---------hcCCC
Confidence 112345888999999999888899999999999999999999999654322 1111111 11112
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+...+..+.+++.+||+.+|++||++.|++++
T Consensus 220 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 2344567789999999999999999999999864
No 263
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=6.7e-35 Score=321.87 Aligned_cols=259 Identities=22% Similarity=0.310 Sum_probs=199.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||.||+|.++ +++.||+|.+.... ......+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 45778889999999999999976 68899999987543 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ ++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 96 69999887543 34889999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc-----Ccchhhh
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS-----GMVFSII 856 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~-----~~~~~~i 856 (958)
.......+++.|+|||++.+. .++.++|||||||++|||++|+.||................ .......
T Consensus 159 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 159 -----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred -----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 111223468899999998754 47889999999999999999999997544321111110000 0000000
Q ss_pred cc------cCCC--------CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DN------RMGS--------YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~------~~~~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ..+. .....+..+.+++.+|++.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00 0000 112345678999999999999999999999974
No 264
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.5e-34 Score=312.86 Aligned_cols=258 Identities=27% Similarity=0.394 Sum_probs=208.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|+..+.||.|+||+||+|... ++..||+|++.... ....+.+.+|+++++.++|+|++++++.+..++..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36788899999999999999975 67899999987543 23456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCC-CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTK-ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
+++++|.++++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976432 45899999999999999999999999 99999999999999999999999999876543222
Q ss_pred CCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.. ........|+..|+|||++... .++.++||||||+++|||++|+.||................ ....
T Consensus 158 ~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~ 227 (267)
T cd06610 158 RT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND-------PPSL 227 (267)
T ss_pred cc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC-------CCCc
Confidence 11 1122345689999999999877 78889999999999999999999997544322211111110 0011
Q ss_pred CCC--ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSY--PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... ....+..+.+++.+||+.||++||++++++++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 228 ETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 110 12556788999999999999999999999864
No 265
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6e-35 Score=321.37 Aligned_cols=245 Identities=23% Similarity=0.336 Sum_probs=200.8
Q ss_pred CceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 630 STQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
...||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++..++..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 447999999999999975 6899999998765445566788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccce
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTH 788 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 788 (958)
.+++... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 106 ~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-------~ 172 (297)
T cd06659 106 TDIVSQT---RLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-------P 172 (297)
T ss_pred HHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc-------c
Confidence 9988543 3889999999999999999999999 9999999999999999999999999987542211 1
Q ss_pred eeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 789 VSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 789 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
......|+..|+|||++.+..++.++||||||+++|||++|+.||.......... ...... ......+...+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~ 244 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSP-------PPKLKNAHKIS 244 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhccC-------CCCccccCCCC
Confidence 1223568999999999998899999999999999999999999997544332221 111100 00011122345
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+.+++.+||+.+|++||++++++++
T Consensus 245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 245 PVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 678899999999999999999999985
No 266
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-34 Score=321.56 Aligned_cols=256 Identities=23% Similarity=0.311 Sum_probs=205.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh---cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ---GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+|+..+.||+|+||+||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++.+...+..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5777889999999999999986 4899999998764322 34578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+.+++|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 999999999998655566999999999999999999999999 99999999999999999999999999875532211
Q ss_pred CCCc----------------------cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh
Q 002158 782 EGTM----------------------PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI 839 (958)
Q Consensus 782 ~~~~----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~ 839 (958)
.... .........||..|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 1000 001112346899999999999988999999999999999999999999754432
Q ss_pred HHHHHHHhhcCcchhhhcccCC-CCChHHHHHHHHHHHHccccCCCCCCC----HHHHHH
Q 002158 840 VREVNVARDSGMVFSIIDNRMG-SYPSECVERFVTLALRCCHDKPEHRPS----MSDVVR 894 (958)
Q Consensus 840 ~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 894 (958)
....... ..... ......+..+.+++.+||+.+|++||+ ++|+++
T Consensus 239 ~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 239 ETFSNIL----------KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHHHHh----------cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 2221111 11110 011125788999999999999999999 666655
No 267
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.8e-35 Score=333.47 Aligned_cols=256 Identities=20% Similarity=0.237 Sum_probs=197.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC---CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS---DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
..+|...+.||+|+||.||++... .+..||||.+... +.+.+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 346888899999999999999854 3578999988653 23458999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|++. ++|.+++... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||+++......
T Consensus 166 e~~~-~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9995 7899998433 45899999999999999999999999 9999999999999999999999999997553221
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch------hHHHHHHHhhcCcc--
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN------IVREVNVARDSGMV-- 852 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~------~~~~~~~~~~~~~~-- 852 (958)
. ........||+.|+|||++....++.++|||||||++|||++|+.||.+... +.............
T Consensus 240 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 240 D-----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred c-----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 1 1122345799999999999999999999999999999999999999965321 11111100000000
Q ss_pred ----h-------hhhcccCC--CCC-----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 ----F-------SIIDNRMG--SYP-----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ----~-------~~i~~~~~--~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. +....... ..+ ...+..+.+++.+|+..||++||++.|++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 00000000 001 1234578889999999999999999999975
No 268
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.1e-34 Score=315.36 Aligned_cols=259 Identities=23% Similarity=0.342 Sum_probs=201.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|+..+.||+|+||.||+|.++ +++.||+|++.... ....+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 35778889999999999999987 68999999886532 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|..++.... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 999988888875433 4899999999999999999999998 99999999999999999999999999986533221
Q ss_pred CCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh----hh
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS----II 856 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----~i 856 (958)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||.+..............+.... ..
T Consensus 156 -------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 156 -------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred -------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 1122347888999999876 45788999999999999999999999765443222211110000000 00
Q ss_pred ----------cccCCC------CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 ----------DNRMGS------YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ----------~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+.... .....+..+.+++.+||+.+|++||++.|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000 011235778999999999999999999999863
No 269
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.6e-34 Score=313.18 Aligned_cols=252 Identities=28% Similarity=0.404 Sum_probs=189.9
Q ss_pred eeeeeCCeEEEEEEECCC---cEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 632 QVGQGGYGKVYKGILSDN---TTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
.||+|+||+||+|...++ ..+++|.+.... ....+.|.+|+.+++.++||||++++++|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999986433 346677666433 3445689999999999999999999999999999999999999999
Q ss_pred HHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 708 LRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 708 L~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|.++++... ....++..+..++.|+++||+|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999997542 234667778899999999999999998 99999999999999999999999999763211100
Q ss_pred cceeeeeccCCCCccChhhhcc-------CCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
........|+..|+|||++.. ..++.++||||||+++|||++ |..||............... ......+
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~ 231 (268)
T cd05086 155 -IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKD--QQVKLFK 231 (268)
T ss_pred -hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhh--cccccCC
Confidence 111123457889999999753 245779999999999999997 56687644332211111111 1111111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
+..+......+.+++..|| .+|++||++++|++.|.
T Consensus 232 ---~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 ---PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ---CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1222335677888999999 67999999999998763
No 270
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.7e-34 Score=313.63 Aligned_cols=255 Identities=24% Similarity=0.434 Sum_probs=201.9
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh----------hcHHHHHHHHHHHHccCCCCcceEEEEEEeCC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL----------QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG 694 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 694 (958)
+|...+.||+|+||.||+|... +++.||+|.++.... ...+.+.+|++++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 3566789999999999999865 688999998753211 11245788999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999765 34889999999999999999999998 9999999999999999999999999987
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCC--CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
....... ........|+..|+|||.+.... ++.++||||||+++||+++|..||............... ...
T Consensus 157 ~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~ 230 (272)
T cd06629 157 KSDDIYD-----NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK-RSA 230 (272)
T ss_pred ccccccc-----ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc-ccC
Confidence 5432111 11123356889999999987654 788999999999999999999999754443322211111 000
Q ss_pred hhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... . ......++..+.+++.+||+.+|++||++++++++
T Consensus 231 ~~~-~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 231 PPI-P---PDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CcC-C---ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000 0 11223456889999999999999999999999874
No 271
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.2e-34 Score=318.22 Aligned_cols=262 Identities=26% Similarity=0.400 Sum_probs=205.9
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEe
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDE 692 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 692 (958)
+...++..++++|...+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 444555667888999999999999999999975 68899999986532 2245678899999999 89999999999865
Q ss_pred C-----CeEEEEEEecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 693 E-----GEQMLVYEFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 693 ~-----~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
. +..++||||+++++|.++++.. ....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence 3 3589999999999999998642 2345899999999999999999999998 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-----CCCCcchhhhHHHHHHHHHhCCCCCCCCchhH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVLLELLTGMQPISHGKNIV 840 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~ 840 (958)
||+|||+++....... ......|+..|+|||++... .++.++|||||||++|||++|+.||.......
T Consensus 168 kl~dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~ 240 (291)
T cd06639 168 KLVDFGVSAQLTSTRL-------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK 240 (291)
T ss_pred EEeecccchhcccccc-------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH
Confidence 9999999875432111 11234588999999998644 36789999999999999999999997544322
Q ss_pred HHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 841 REVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 841 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........ ... . ...+......+.+++.+||+.+|++||++.|++++
T Consensus 241 ~~~~~~~~--~~~-----~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 241 TLFKIPRN--PPP-----T-LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHHHhcC--CCC-----C-CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 22111111 000 0 01133455679999999999999999999999874
No 272
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=6.3e-35 Score=319.50 Aligned_cols=259 Identities=26% Similarity=0.386 Sum_probs=201.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|+..+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 35778899999999999999986 589999998765322 234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.++..... .+++.++..++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred cCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 999999998876433 3899999999999999999999998 99999999999999999999999999876432111
Q ss_pred CCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch----h--
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF----S-- 854 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~----~-- 854 (958)
......++..|+|||++.+. .++.++||||||+++|||++|+.||................+... .
T Consensus 156 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 156 -------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred -------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHh
Confidence 11234578899999998753 467899999999999999999999875443322111111000000 0
Q ss_pred ----hhccc-CC---------CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 ----IIDNR-MG---------SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ----~i~~~-~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..... .. .....++..+.+++.+||+.+|++||++++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000 00 0122456789999999999999999999999864
No 273
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.2e-34 Score=312.23 Aligned_cols=237 Identities=27% Similarity=0.442 Sum_probs=190.3
Q ss_pred ceeeeeCCeEEEEEEECCCc-----------EEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 631 TQVGQGGYGKVYKGILSDNT-----------TVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+.||+|+||.||+|.+.+.. .|++|.+...... ...|.+|+.++++++|+||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 36899999999999986433 5788877654433 6789999999999999999999999988 788999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-------CeEEeeeee
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-------NAKVADFGL 772 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-------~~kl~DFGl 772 (958)
|||+++|+|.+++..... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999976442 5889999999999999999999998 99999999999999888 799999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccC--CCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDS 849 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~ 849 (958)
++.... .....++..|+|||++... .++.++||||||+++|||++ |..||...... ........
T Consensus 155 a~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~~- 221 (259)
T cd05037 155 PITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-EKERFYQD- 221 (259)
T ss_pred cccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-hHHHHHhc-
Confidence 875422 1123467789999999876 78899999999999999999 57777544311 11111110
Q ss_pred CcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 850 GMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 850 ~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.. ..+......+.+++.+||..+|.+||++.++++.|
T Consensus 222 --------~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 222 --------QH--RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred --------CC--CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00 01111127889999999999999999999999876
No 274
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.3e-34 Score=322.06 Aligned_cols=256 Identities=23% Similarity=0.306 Sum_probs=187.2
Q ss_pred CceeeeeCCeEEEEEEEC---CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEEEEEEecC
Q 002158 630 STQVGQGGYGKVYKGILS---DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQMLVYEFVP 704 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~E~~~ 704 (958)
..+||+|+||+||+|..+ ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999975 35789999987543 23457899999999999999999999853 557899999995
Q ss_pred CCCHHHHhccC-------CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe----cCCCCeEEeeeeee
Q 002158 705 NGTLRDWLSGR-------TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL----DSNLNAKVADFGLS 773 (958)
Q Consensus 705 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl----~~~~~~kl~DFGla 773 (958)
++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5888877422 1234889999999999999999999999 9999999999999 56679999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhH--------HHHH
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIV--------REVN 844 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~--------~~~~ 844 (958)
+........ ........||+.|+|||++.+. .++.++|||||||++|||+||+.||....... ....
T Consensus 160 ~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~ 235 (317)
T cd07867 160 RLFNSPLKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLD 235 (317)
T ss_pred eccCCCccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHH
Confidence 865322111 1112345689999999999764 57889999999999999999999996432110 0000
Q ss_pred -HHh--------------hcCcchhhhcc-------------cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 845 -VAR--------------DSGMVFSIIDN-------------RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 845 -~~~--------------~~~~~~~~i~~-------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... ........... ............+.+++.+|++.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 236 RIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred HHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 000 00000000000 0000011123457889999999999999999999863
No 275
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.6e-34 Score=316.11 Aligned_cols=259 Identities=25% Similarity=0.370 Sum_probs=201.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|++|.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999976 68999999886542 22235788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ ++|.+++.......+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 95 68999997665566899999999999999999999998 99999999999999999999999999875422111
Q ss_pred CCccceeeeeccCCCCccChhhhccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh-----
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII----- 856 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i----- 856 (958)
......++..|+|||++.+.. ++.++||||||+++|||+||+.||................+.....+
T Consensus 156 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 156 ------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred ------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 112234688999999887654 57899999999999999999999976554332222111111100000
Q ss_pred -------------cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 -------------DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 -------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...........+..+.+++.+||+.||++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000112345677899999999999999999999863
No 276
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.4e-34 Score=309.53 Aligned_cols=251 Identities=35% Similarity=0.561 Sum_probs=203.8
Q ss_pred CCCCceeeeeCCeEEEEEEECC-----CcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILSD-----NTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
|+..+.||+|+||.||++.+.+ +..||+|++...... ..+.+..|+++++.++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456789999999999999864 388999999765433 5668999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.......+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999997654433899999999999999999999999 9999999999999999999999999987653321
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.. ......+++.|+|||.+.+..++.++||||+|++++||++ |..||..... ......... ..
T Consensus 158 ~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-~~~~~~~~~---------~~ 221 (258)
T smart00219 158 YY------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-EEVLEYLKK---------GY 221 (258)
T ss_pred cc------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhc---------CC
Confidence 11 0112237789999999988889999999999999999999 7888864222 121111111 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
....+...+..+.+++.+|+..+|++||++.|+++.|
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1222344678899999999999999999999998753
No 277
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.1e-34 Score=318.53 Aligned_cols=260 Identities=21% Similarity=0.310 Sum_probs=203.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+|...+.||+|+||.||++... .++.||+|.+..... .....+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6778899999999999999986 578999999876432 234578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 82 YVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 999999999996543 4889999999999999999999998 99999999999999999999999999874211000
Q ss_pred CC--------CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 782 EG--------TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 782 ~~--------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
.. ...........|+..|+|||++....++.++|+||||+++|||++|..||.+... .+..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-~~~~~~~~~~~~-- 233 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVISDDI-- 233 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccc--
Confidence 00 0001111234578899999999988899999999999999999999999975432 121111111000
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.....+...+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 234 -----~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 234 -----EWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred -----CCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 0111122456788999999999999999997666665544
No 278
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.6e-34 Score=316.99 Aligned_cols=244 Identities=25% Similarity=0.366 Sum_probs=202.8
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+|+..+.||+|+||.||++.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 5778889999999999999976 68999999986532 2334578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++... ..++...+..++.|++.||+|||+.+ ++||||+|+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 82 YVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred cCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 99999999999765 34899999999999999999999998 999999999999999999999999998764221
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.....|++.|+|||.+.+...+.++||||||+++|||++|+.||........ ..... ....
T Consensus 155 --------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~----------~~~~ 215 (290)
T cd05580 155 --------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI-YEKIL----------EGKV 215 (290)
T ss_pred --------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHh----------cCCc
Confidence 1234588999999999888889999999999999999999999975442111 11111 1112
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
..+...+..+.+++.+||+.||.+|+ +++|++++
T Consensus 216 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 216 RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 23445578899999999999999998 66777653
No 279
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.5e-34 Score=314.72 Aligned_cols=259 Identities=25% Similarity=0.318 Sum_probs=202.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|...+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.++++++|+||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4677889999999999999975 68999999987654 23346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+ +++|.+++.... ..+++.++..++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 999999997544 45899999999999999999999999 99999999999999999999999999886533221
Q ss_pred CCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch--------
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF-------- 853 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~-------- 853 (958)
.......|+..|+|||++.+. .++.++||||+|+++|||++|..||................+...
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 111234588999999998654 468899999999999999999877765443222211111100000
Q ss_pred ------hhhccc-----CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 ------SIIDNR-----MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ------~~i~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... ......+.+..+.+++.+|++.+|++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 001112345889999999999999999999999874
No 280
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.7e-34 Score=313.94 Aligned_cols=254 Identities=28% Similarity=0.432 Sum_probs=202.9
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCC------
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEG------ 694 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~------ 694 (958)
.+++|+..+.||+|+||.||+|..+ +++.|++|++..... ..+.|.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4678999999999999999999986 678999999876443 346789999999999 7999999999997644
Q ss_pred eEEEEEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
..++||||+++++|.+++.... ...+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence 4899999999999999987533 456899999999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhcc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
+....... .......|+..|+|||++.. ..++.++||||||+++|||++|+.||..............
T Consensus 160 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 232 (275)
T cd06608 160 SAQLDSTL-------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR 232 (275)
T ss_pred ceecccch-------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc
Confidence 87543211 11123458899999999854 3467799999999999999999999975433222211111
Q ss_pred hcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 848 DSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 848 ~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. . .. ....+..++..+.+++.+||..||++||++.+++++
T Consensus 233 ~--~-----~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 233 N--P-----PP-TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred c--C-----CC-CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0 0 00 011133466789999999999999999999999863
No 281
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.3e-34 Score=308.90 Aligned_cols=252 Identities=27% Similarity=0.410 Sum_probs=204.1
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|...+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4677889999999999999975 688999999876543 3567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999999997543 3788999999999999999999999 999999999999999999999999998865432221
Q ss_pred CCccceeeeeccCCCCccChhhhccCC---CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
. ........++..|+|||++.+.. ++.++||||||+++|||++|+.||............... ..
T Consensus 156 ~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---------~~ 223 (264)
T cd06626 156 M---GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---------GH 223 (264)
T ss_pred c---cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---------CC
Confidence 1 11012345888999999998766 888999999999999999999999754322221111110 11
Q ss_pred CCCCCh--HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 860 MGSYPS--ECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 860 ~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
....+. .++..+.+++.+||+.+|++||++.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 112222 23677889999999999999999999875
No 282
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.9e-34 Score=315.15 Aligned_cols=250 Identities=25% Similarity=0.395 Sum_probs=196.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHH-HHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKL-LSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|+..+.||+|+||.||+|.++ +|+.||+|+++... .....++..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36788899999999999999986 69999999987642 2334456667665 666789999999999999999999999
Q ss_pred ecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 702 FVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 702 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
|++ |+|.+++... ....+++..+..++.|++.||+|||++ + ++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 995 7898887642 234689999999999999999999987 7 99999999999999999999999999875421
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhcc----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
. .......|+..|+|||++.+ ..++.++|+||||+++|||++|+.||..............
T Consensus 157 ~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~------- 221 (283)
T cd06617 157 S--------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV------- 221 (283)
T ss_pred c--------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH-------
Confidence 1 11122458889999998865 4568899999999999999999999965332222221111
Q ss_pred hhcccCCCCC-hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 IIDNRMGSYP-SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......+ ..++.++.+++.+||..+|++||++++++++
T Consensus 222 --~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 222 --EEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred --hcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111112 2356789999999999999999999999874
No 283
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.1e-34 Score=311.11 Aligned_cols=251 Identities=20% Similarity=0.335 Sum_probs=200.9
Q ss_pred CCCCCceeeeeCCeEEEEEEECC--CcEEEEEEeccC----------ChhcHHHHHHHHHHHHc-cCCCCcceEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSD--NTTVAIKRAEEG----------SLQGQNEFLTEIKLLSR-LHHRNLVSLLGYCDE 692 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~ 692 (958)
+|+..+.||+|+||.||+|.++. ++.+|+|.+... ......++.+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 46778899999999999999865 688999987532 12223457789988875 799999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhcc--CCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEee
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSG--RTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
.+..++||||+++++|.+++.. .....+++..+++++.|++.||.|||+ .+ ++|+||||+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998853 223458999999999999999999996 56 99999999999999999999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS 849 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~ 849 (958)
||.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ........
T Consensus 158 fg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-~~~~~~~~- 227 (269)
T cd08528 158 FGLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-SLATKIVE- 227 (269)
T ss_pred ccceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-HHHHHHhh-
Confidence 99997643211 123356889999999999888999999999999999999999999654322 11111111
Q ss_pred CcchhhhcccCCCC-ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 850 GMVFSIIDNRMGSY-PSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 850 ~~~~~~i~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
...... ....+..+.+++.+||+.||++||++.|+.++++
T Consensus 228 --------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 --------AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --------ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111111 1234578999999999999999999999998875
No 284
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.8e-34 Score=316.44 Aligned_cols=258 Identities=25% Similarity=0.343 Sum_probs=200.1
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh-----cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ-----GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+|+..+.||+|+||.||+|.+. +++.||||.+...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3667789999999999999976 6899999998765332 234577899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+ +++|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.++|+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 899999997654 35899999999999999999999999 999999999999999999999999999865332
Q ss_pred CCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch-----
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF----- 853 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~----- 853 (958)
.. ......++..|+|||.+.+ ..++.++|||||||++|||++|..||................+...
T Consensus 156 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 156 NR-------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228 (298)
T ss_pred Cc-------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhh
Confidence 11 1122346788999999865 4578899999999999999999777765443222111111000000
Q ss_pred ------hhhc-ccCC-----CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 ------SIID-NRMG-----SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ------~~i~-~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.... .... ......+..+.+++.+||+.+|++||+++|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000 0000 1112346788999999999999999999999973
No 285
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4.2e-34 Score=312.83 Aligned_cols=248 Identities=23% Similarity=0.361 Sum_probs=202.7
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
|...+.||+|++|.||+|... +++.||+|++........+.+.+|+.+++.++|+||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444579999999999999975 6889999998765555566789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
++|.+++.. ..+++.++..++.|++.||+|||+.+ |+||||+|+||+++.++.++|+|||.+.......
T Consensus 101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~----- 169 (285)
T cd06648 101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV----- 169 (285)
T ss_pred CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC-----
Confidence 999999976 24889999999999999999999999 9999999999999999999999999886542211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.......|++.|+|||.+.+..++.++||||||+++|||++|+.||........ ........ ......+.
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~-~~~~~~~~-------~~~~~~~~ 239 (285)
T cd06648 170 --PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA-MKRIRDNL-------PPKLKNLH 239 (285)
T ss_pred --cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH-HHHHHhcC-------CCCCcccc
Confidence 111234588999999999988899999999999999999999999975443221 11111110 00011122
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+..+.+++.+||+.+|++||++.+++++
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 240 KVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 356789999999999999999999999963
No 286
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.6e-34 Score=310.26 Aligned_cols=256 Identities=23% Similarity=0.394 Sum_probs=204.2
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC------hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS------LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
+|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4677889999999999999864 68999999886432 1124578899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-CeEEeeeeeecccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-NAKVADFGLSRLAP 777 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~~ 777 (958)
||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++ .+||+|||.+....
T Consensus 81 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999999997543 4889999999999999999999999 99999999999998776 59999999987654
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
...... ........|+..|+|||.+.+..++.++||||+|+++|||++|..||............... ...
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~ 226 (268)
T cd06630 156 AKGTGA---GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKI------ASA 226 (268)
T ss_pred cccccC---CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHH------hcc
Confidence 321111 11122345889999999998888999999999999999999999999643321111000000 000
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+...+.++.+++.+|++.+|++||++.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 227 TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 11234456677889999999999999999999999863
No 287
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=300.23 Aligned_cols=269 Identities=27% Similarity=0.355 Sum_probs=220.6
Q ss_pred ChHHHHHHHcCCCCCceeeeeCCeEEEEEEECC------CcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEE
Q 002158 616 KFKELAMATAYFSSSTQVGQGGYGKVYKGILSD------NTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLG 688 (958)
Q Consensus 616 ~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~ 688 (958)
+.+|+.....+++....+.+|.||+||+|.|.+ .+.|.||.++.. +.-+...|+.|.-.+..+.|||+.++.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 346778888889999999999999999998753 456778888765 3444567999999999999999999999
Q ss_pred EEEe-CCeEEEEEEecCCCCHHHHhccC------CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC
Q 002158 689 YCDE-EGEQMLVYEFVPNGTLRDWLSGR------TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS 761 (958)
Q Consensus 689 ~~~~-~~~~~lV~E~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~ 761 (958)
++.+ .+..+.+|.++.-|+|..++... ..+.++..+...++.|++.|++|||+++ |||.||.++|++||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehh
Confidence 9865 45778999999999999999732 2345888899999999999999999999 999999999999999
Q ss_pred CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhH
Q 002158 762 NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIV 840 (958)
Q Consensus 762 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~ 840 (958)
..++||+|=.++|.+-..+- ............||+||.+....|+.++|||||||+||||+| |+.|+.+-+..+
T Consensus 432 ~LqVkltDsaLSRDLFP~DY-----hcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE 506 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDY-----HCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE 506 (563)
T ss_pred heeEEeccchhccccCcccc-----cccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH
Confidence 99999999999987633221 111222335678999999999999999999999999999999 999997654432
Q ss_pred HHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 841 REVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 841 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
.. .. +.|+.+-..|-+||+++..+|..||..+|++||+++|++.-|.+.-.+
T Consensus 507 m~--~y--------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 507 ME--HY--------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred HH--HH--------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 22 11 223334456889999999999999999999999999999998876543
No 288
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.3e-34 Score=311.52 Aligned_cols=255 Identities=28% Similarity=0.431 Sum_probs=199.9
Q ss_pred CCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC------
Q 002158 627 FSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG------ 694 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 694 (958)
|...+.||+|+||+||+|.+. .++.||||++... .....+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456778999999999999864 3688999998754 2334567899999999999999999999886532
Q ss_pred eEEEEEEecCCCCHHHHhccCC----CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeee
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRT----KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADF 770 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DF 770 (958)
..++++||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 3478999999999998875321 224788999999999999999999998 999999999999999999999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhc
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDS 849 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~ 849 (958)
|+++....... ........++..|++||.+....++.++||||||+++|||++ |+.||...... .........
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~ 231 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-EIYNYLIKG 231 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-HHHHHHHcC
Confidence 99885432111 011112345678999999998889999999999999999999 88888644321 111111111
Q ss_pred CcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 850 GMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 850 ~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.....+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 232 ---------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 ---------NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11112334567899999999999999999999999999875
No 289
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.3e-34 Score=311.23 Aligned_cols=248 Identities=26% Similarity=0.400 Sum_probs=204.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+|+..+.||+|+||.||+|.++ +++.||+|.+.... ....+++.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 4666788999999999999986 68999999987653 344567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++++|.+++.... ..++...+.+++.|++.||+|||+ .+ ++||||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~-- 155 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-- 155 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH--
Confidence 9999999997543 458899999999999999999999 88 9999999999999999999999999987542111
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc----hhHHHHHHHhhcCcchhhhcc
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK----NIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~----~~~~~~~~~~~~~~~~~~i~~ 858 (958)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||.... ......... ...
T Consensus 156 -------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~~~ 219 (265)
T cd06605 156 -------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI---------VNE 219 (265)
T ss_pred -------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHH---------hcC
Confidence 111568889999999999999999999999999999999999996542 111111111 111
Q ss_pred cCCCCChH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 RMGSYPSE-CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+.. .+..+.+++.+||..+|++||++.+++.+
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 220 PPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 11222333 67789999999999999999999999864
No 290
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.4e-34 Score=309.56 Aligned_cols=249 Identities=29% Similarity=0.426 Sum_probs=208.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+|+..+.||+|++|.||+|+.. +++.||||++..... .....+.+|++.+++++|+|++++++++...+..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 5778899999999999999987 599999999876543 34567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++++|.+++... ..+++..+..++.|+++|++|||+ .+ ++||||+|+||+++.++.++|+|||.+.........
T Consensus 82 ~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 82 DGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 999999999754 348999999999999999999999 88 999999999999999999999999998765322211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc--hhHHHHHHHhhcCcchhhhcccC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK--NIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~--~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||.... .......... ....
T Consensus 157 -------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---------~~~~ 220 (264)
T cd06623 157 -------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC---------DGPP 220 (264)
T ss_pred -------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh---------cCCC
Confidence 123457889999999999989999999999999999999999997654 2222221111 1122
Q ss_pred CCCChH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSE-CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+.. ++..+.+++.+||+.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 233344 67889999999999999999999999974
No 291
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.3e-34 Score=316.20 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=204.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.+|...+.||+|+||.||+|... +++.||+|.+........+.+.+|+.++++++|||++++++++...+..++||||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 46778899999999999999865 68899999987655455567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.+. .+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-- 170 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc--
Confidence 999999999653 3788999999999999999999999 99999999999999999999999998875432111
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
......|++.|+|||.+....++.++||||||+++||+++|+.||........... ....+ ......
T Consensus 171 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-~~~~~-------~~~~~~ 237 (293)
T cd06647 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IATNG-------TPELQN 237 (293)
T ss_pred -----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-hhcCC-------CCCCCC
Confidence 11234588899999999888899999999999999999999999975433211110 00000 000112
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+...+..+.+++.+||+.+|++||++.+++.+
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 238 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33456778999999999999999999999975
No 292
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.9e-34 Score=314.49 Aligned_cols=258 Identities=24% Similarity=0.353 Sum_probs=201.9
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|+||.||+|.++ +++.||||+++... ....+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5778889999999999999986 58899999886532 23346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++++.+..+.... ..+++.++..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 155 (288)
T cd07833 82 VERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA- 155 (288)
T ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-
Confidence 9987777666433 34899999999999999999999999 99999999999999999999999999876533221
Q ss_pred CCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh----hh-
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS----II- 856 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----~i- 856 (958)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||................+.... ..
T Consensus 156 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 156 -----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred -----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 112234578899999999888 7889999999999999999999999754332221111110000000 00
Q ss_pred -cc-----cC----------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 857 -DN-----RM----------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 857 -~~-----~~----------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
+. .. ..++..++.++.+++.+||..+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 00 0122334788999999999999999999999986
No 293
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.4e-34 Score=316.23 Aligned_cols=245 Identities=28% Similarity=0.453 Sum_probs=199.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
..|...+.||+|+||+||+|... +++.||+|.+.... ....+++.+|+++++.++|||++++++++...+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45777889999999999999976 68999999886432 233457889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||++ |++.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-- 167 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSP-- 167 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCC--
Confidence 9996 68878775433 34899999999999999999999999 99999999999999999999999999875421
Q ss_pred CCCCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.....|+..|+|||++. ...++.++||||||+++|||++|+.||..............
T Consensus 168 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~---------- 228 (307)
T cd06607 168 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ---------- 228 (307)
T ss_pred ---------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc----------
Confidence 11245788999999884 35678899999999999999999999975443222111111
Q ss_pred ccCCC-CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGS-YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..... .+..++..+.+++.+||+.+|++||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 229 NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 11111 133467789999999999999999999999975
No 294
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.1e-34 Score=307.55 Aligned_cols=250 Identities=22% Similarity=0.397 Sum_probs=203.8
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~ 700 (958)
+|+..+.||+|+||.||+|... +++.||+|.+... .....+++.+|++++++++|+||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 3677789999999999999975 6889999988653 33345678899999999999999999998754 45679999
Q ss_pred EecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhh-----hcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 701 EFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLH-----TEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 701 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH-----~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
||+++++|.+++... ....+++..++.++.|++.||+||| +.+ ++|+||||+||+++.++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999653 2345899999999999999999999 666 999999999999999999999999998
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
........ ......|+..|+|||++.+..++.++||||||+++|+|++|+.||..... .......
T Consensus 158 ~~~~~~~~-------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~------- 222 (265)
T cd08217 158 KILGHDSS-------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-LQLASKI------- 222 (265)
T ss_pred ccccCCcc-------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-HHHHHHH-------
Confidence 86532211 11234589999999999988899999999999999999999999975432 1111111
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........+...+..+.+++.+|++.+|++||++++|+++
T Consensus 223 --~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 223 --KEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --hcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1112234455677889999999999999999999999874
No 295
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.6e-34 Score=311.21 Aligned_cols=247 Identities=25% Similarity=0.420 Sum_probs=203.6
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
-|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4667789999999999999875 68899999886543 333467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++... .+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06641 85 GGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch---
Confidence 999999999643 3889999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.......|+..|+|||++.+..++.++|||||||++|||++|..||...... ...... ........
T Consensus 156 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~---------~~~~~~~~ 221 (277)
T cd06641 156 ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-KVLFLI---------PKNNPPTL 221 (277)
T ss_pred ----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-HHHHHH---------hcCCCCCC
Confidence 1112345788999999998888899999999999999999999999643321 111111 01112233
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+..++..+.+++.+||+.+|.+||++.+++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 44567889999999999999999999999985
No 296
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.7e-34 Score=315.74 Aligned_cols=258 Identities=23% Similarity=0.346 Sum_probs=198.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|+||.||+|++. +|+.||+|++..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 3677789999999999999986 689999999865322 2234678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ ++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 96 58888886533 34899999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCccceeeeeccCCCCccChhhhccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc-Cc--------c
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS-GM--------V 852 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~-~~--------~ 852 (958)
.......++..|+|||++.+.. ++.++|||||||++|||+||..|+..+.+........... +. .
T Consensus 154 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 154 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred -----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHh
Confidence 1112235788999999987754 6889999999999999999999875544433222211100 00 0
Q ss_pred hhhhcc-cC---------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIIDN-RM---------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~~-~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+. .. .......+..+.+++.+||+.||.+|||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 000000 00 01112345788899999999999999999999864
No 297
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.9e-34 Score=310.33 Aligned_cols=250 Identities=25% Similarity=0.409 Sum_probs=204.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|...+.||+|+||.||+|..+ +|..||+|.+.... ....+.+.+|++++++++|+||+++++.+...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4677889999999999999986 58899999986532 23445788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-CeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-NAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~~~~~~ 781 (958)
+++++|.+++.......+++..+..++.|+++||+|||+.+ ++|+||||+||++++++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99999999997655556899999999999999999999999 99999999999999886 46999999987653211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.......|++.|+|||+..+..++.++||||||+++|||++|..||..... ....... ......
T Consensus 157 ------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~---------~~~~~~ 220 (257)
T cd08225 157 ------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-HQLVLKI---------CQGYFA 220 (257)
T ss_pred ------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-HHHHHHH---------hcccCC
Confidence 111224588999999999888899999999999999999999999964332 2222111 111122
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+...+..+.+++.+||+.+|++||++.|++++
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 2334456789999999999999999999999864
No 298
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4e-34 Score=312.71 Aligned_cols=258 Identities=25% Similarity=0.357 Sum_probs=201.0
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
|+..+.||+|++|.||+|.+. +|+.||+|++.... ......+.+|++++++++|+|++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999976 79999999986543 222356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
+++|.+++.......+++..+..++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||+++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 81 -DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred -CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--
Confidence 479999997665456899999999999999999999998 99999999999999999999999999875422111
Q ss_pred CccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh------
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII------ 856 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i------ 856 (958)
......++..|+|||++.+. .++.++||||||+++|||++|+.||................+......
T Consensus 155 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 -----TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred -----ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 11122468899999988664 568899999999999999999999976554333222111101000000
Q ss_pred ------------cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 ------------DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...........+..+.+++.+|++.+|++||+++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000011122344678899999999999999999999863
No 299
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=7.7e-34 Score=310.97 Aligned_cols=253 Identities=26% Similarity=0.424 Sum_probs=207.7
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.++.|+..+.||+|+||.||+|.++ +++.||+|++..... ..+.+.+|++.++.++|+|++++++++...+..++|||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4556777788999999999999987 688999999976544 45678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999998654 35899999999999999999999998 99999999999999999999999999865432111
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
......++..|+|||++.+..++.++||||||+++|||++|+.||............... .. . ..
T Consensus 172 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~------~-~~ 236 (286)
T cd06614 172 -------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GI------P-PL 236 (286)
T ss_pred -------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CC------C-CC
Confidence 112335788999999999888999999999999999999999999755433222111110 00 0 00
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+..++..+.+++.+||+.+|.+||++.+++++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 237 KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1122366789999999999999999999999864
No 300
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=7.5e-34 Score=311.90 Aligned_cols=258 Identities=22% Similarity=0.361 Sum_probs=197.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|+..+.||+|++|.||+|..+ +++.||||.+...... ....+.+|++++++++|+||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 46778899999999999999986 6899999998654322 234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ ++|.+++..... .+++..+..++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~-~~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 85 LD-TDLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred CC-CCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 97 599999875433 5889999999999999999999999 9999999999999999999999999987432111
Q ss_pred CCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh-cCc----ch-hh
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD-SGM----VF-SI 855 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~-~~~----~~-~~ 855 (958)
.......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.........+..... .+. .. ..
T Consensus 158 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGV 232 (291)
T ss_pred -----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhh
Confidence 11122346788999999876 45788999999999999999999999654422222111100 000 00 00
Q ss_pred h------cccCC--------CCChHH--HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 856 I------DNRMG--------SYPSEC--VERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 856 i------~~~~~--------~~~~~~--~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
. ..... ...... ...+.+++.+|++.+|++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00000 000011 267789999999999999999999886
No 301
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.3e-34 Score=315.63 Aligned_cols=258 Identities=22% Similarity=0.266 Sum_probs=196.2
Q ss_pred eeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHH
Q 002158 632 QVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLR 709 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 709 (958)
.+|.|+++.||++.. +++.||||++... .....+.+.+|++++++++|+||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 344555555555544 6899999998754 3445568999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcccee
Q 002158 710 DWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHV 789 (958)
Q Consensus 710 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 789 (958)
+++.......+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.+................
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccccc
Confidence 9998655455889999999999999999999999 9999999999999999999999999987553322211111122
Q ss_pred eeeccCCCCccChhhhccC--CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc----------
Q 002158 790 STIVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID---------- 857 (958)
Q Consensus 790 ~~~~~gt~~y~aPE~~~~~--~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~---------- 857 (958)
.....++..|+|||++... .++.++|||||||++|||++|+.||................ ....++
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGT--VPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CccccccCchhhhcCC
Confidence 2344578899999998763 57889999999999999999999997654332222111100 000000
Q ss_pred ---------------ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 ---------------NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ---------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
............++.+++.+||+.||++||++++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00011233456788999999999999999999999975
No 302
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.7e-34 Score=312.93 Aligned_cols=260 Identities=22% Similarity=0.279 Sum_probs=198.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCe-----
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGE----- 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~----- 695 (958)
++|+..+.||+|+||.||+|.+. +++.||||++..... .....+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36788899999999999999976 689999998765432 22356889999999995 6999999999877665
Q ss_pred EEEEEEecCCCCHHHHhccCC---CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeee
Q 002158 696 QMLVYEFVPNGTLRDWLSGRT---KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFG 771 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFG 771 (958)
.++||||+++ +|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8988886532 235899999999999999999999999 999999999999998 8899999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
+++.+.... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||................+
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 229 (295)
T cd07837 157 LGRAFSIPV-------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLG 229 (295)
T ss_pred cceecCCCc-------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 987542211 11112346788999999865 4578899999999999999999999976554433322111100
Q ss_pred cchhhhc------------c-----cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 851 MVFSIID------------N-----RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 851 ~~~~~i~------------~-----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....... . .........+..+.+++.+||+.||++||+++|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 230 TPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000 0 0000112356778999999999999999999999864
No 303
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.5e-34 Score=309.96 Aligned_cols=247 Identities=23% Similarity=0.395 Sum_probs=200.6
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccC---CCCcceEEEEEEeCCeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLH---HRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~ 700 (958)
.|+..+.||+|+||.||+|.+. +++.||+|.+... ......++.+|++++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4667788999999999999975 7899999998654 2334567889999999996 999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.++++.. .+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998653 4899999999999999999999999 9999999999999999999999999987653322
Q ss_pred CCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......|+..|+|||.+.++ .++.++||||||+++|||++|..||........ ..... ...
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-~~~~~---------~~~ 218 (277)
T cd06917 156 -------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-MMLIP---------KSK 218 (277)
T ss_pred -------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-hhccc---------cCC
Confidence 111234588999999998754 468899999999999999999999975432211 11000 001
Q ss_pred CCCCCh-HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPS-ECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+. ..+.++.+++.+||+.||++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 219 PPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 111222 256789999999999999999999999874
No 304
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.2e-33 Score=315.88 Aligned_cols=261 Identities=20% Similarity=0.285 Sum_probs=196.7
Q ss_pred eeeee--CCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 632 QVGQG--GYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 632 ~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
.||+| +||+||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++||||++++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999975 79999999987532 233467889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcc
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMP 786 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 786 (958)
+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++|||.+.............
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 9999998655455899999999999999999999998 9999999999999999999999998654332211111100
Q ss_pred ceeeeeccCCCCccChhhhccC--CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch-----------
Q 002158 787 THVSTIVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF----------- 853 (958)
Q Consensus 787 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~----------- 853 (958)
........++..|+|||++.+. .++.++|||||||++|||++|+.||....................
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence 0011122356779999999764 478899999999999999999999975443222211111000000
Q ss_pred ------------------------hhhcccC-CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 ------------------------SIIDNRM-GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ------------------------~~i~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....... ...+..++..+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000000 11133567789999999999999999999999875
No 305
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-33 Score=308.12 Aligned_cols=255 Identities=24% Similarity=0.324 Sum_probs=200.5
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~E 701 (958)
+|...+.||.|++|.||+|.+. +++.||+|.+..... ....++.+|++++++++||||+++++++... +..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5777889999999999999985 688999999875432 3456799999999999999999999998653 46899999
Q ss_pred ecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 702 FVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 702 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|+++++|.+++... ....++...+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 99999999987532 2345888999999999999999999999 999999999999999999999999998654211
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch----hHHHHHHHhhcCcchhh
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN----IVREVNVARDSGMVFSI 855 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~----~~~~~~~~~~~~~~~~~ 855 (958)
......++..|+|||.+.+..++.++||||+|+++|||++|+.||..... .......... ......
T Consensus 159 ---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 228 (287)
T cd06621 159 ---------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-MPNPEL 228 (287)
T ss_pred ---------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-CCchhh
Confidence 11134578899999999999999999999999999999999999975421 1111111111 000000
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... .......++.+.+++.+||+.+|.+||++.|++++
T Consensus 229 -~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 229 -KDE-PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred -ccC-CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 000 01112356789999999999999999999999974
No 306
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=9.4e-34 Score=311.42 Aligned_cols=263 Identities=15% Similarity=0.183 Sum_probs=189.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccCChhc--H---------HHHHHHHHHHHccCCCCcceEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEGSLQG--Q---------NEFLTEIKLLSRLHHRNLVSLLGY 689 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~--~---------~~~~~E~~~l~~l~H~niv~l~~~ 689 (958)
.+|.+.+.||+|+||+||+|.+.+ +..+|+|+........ . .....+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578888999999999999999764 3456666543221110 0 112334455667789999999998
Q ss_pred EEeCC----eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 690 CDEEG----EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 690 ~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
+.... ..+++||++. .++.+.+.... ..++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcE
Confidence 76543 4578888874 57777775432 2567888999999999999999998 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNV 845 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~ 845 (958)
+|+|||+|+.+..................||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~ 245 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA 245 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence 99999999866432211111111223456999999999999999999999999999999999999999755322221111
Q ss_pred HhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 846 ARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 846 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
... +....+..+.. ....+++.+.+++..||+.+|++||+++++++.+
T Consensus 246 ~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 246 AKC-DFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hHH-HHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 110 00011111111 1234568899999999999999999999999865
No 307
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=9.4e-34 Score=311.46 Aligned_cols=259 Identities=24% Similarity=0.295 Sum_probs=199.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--cHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV 699 (958)
++|+..+.||+|+||.||+|.++ +++.||+|.++..... ....+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 35777789999999999999986 5889999998754322 234577899999999999999999998877 899999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||++ ++|.+++..... .+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ-PFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 599999875432 5899999999999999999999999 999999999999999999999999998865322
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc------
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV------ 852 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~------ 852 (958)
.. ......++..|+|||.+.+.. ++.++|+||+|+++|||++|..||................+..
T Consensus 160 ~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 160 LK-------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred cc-------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 11 112234788999999987654 6889999999999999999999997544322211111000000
Q ss_pred --------h-----hhhcccC-CCCChH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 --------F-----SIIDNRM-GSYPSE-CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 --------~-----~~i~~~~-~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ....... ..++.. .++.+.+++.+||+.+|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 0000000 112222 46778999999999999999999999863
No 308
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.9e-33 Score=301.01 Aligned_cols=248 Identities=31% Similarity=0.514 Sum_probs=206.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
.|+..+.||+|++|.||++.+. +++.|++|++........+.+.+|++++++++|+|++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3667789999999999999986 688999999987655566789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 999999997653 35899999999999999999999988 99999999999999999999999999876532211
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC-
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY- 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 863 (958)
.....|+..|+|||++.+..++.++||||||+++|||++|+.||.............. ......
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----------~~~~~~~ 218 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT----------NGPPGLR 218 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----------cCCCCcC
Confidence 2234688999999999988899999999999999999999999975432222211111 001111
Q ss_pred -ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 -PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 -~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+..++..+.+++.+||+.||++||++.|++++
T Consensus 219 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 219 NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 12236789999999999999999999999864
No 309
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.9e-34 Score=312.89 Aligned_cols=251 Identities=25% Similarity=0.372 Sum_probs=195.9
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEEec
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
|...+.||+|+||.||++.+. +++.||+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 444568999999999999976 68999999987542 344567899999999996 999999999999999999999998
Q ss_pred CCCCHHHHh---ccCCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 704 PNGTLRDWL---SGRTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 704 ~~gsL~~~l---~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
+ +++.++. .......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 86 D-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred c-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 5 4655443 333335589999999999999999999975 7 999999999999999999999999998754221
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccC---CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
. ......|+..|+|||++.+. .++.++|||||||++|||++|+.||................ ..
T Consensus 162 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~---- 228 (288)
T cd06616 162 I--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG-DP---- 228 (288)
T ss_pred C--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC-CC----
Confidence 1 11223588999999999776 68899999999999999999999997544222222111110 00
Q ss_pred cccC-CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRM-GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+.. ...+..++..+.+++.+||+.+|++||++++|+++
T Consensus 229 -~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 -PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011 11223467789999999999999999999999974
No 310
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.7e-33 Score=312.89 Aligned_cols=247 Identities=28% Similarity=0.451 Sum_probs=198.8
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
|...+.||+|+||.||+|.+. ++..||+|++.... ......+.+|++++++++|+|++++++++..+...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 556678999999999999975 68899999986432 23345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ |+|.+++... ...+++.++..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++.....
T Consensus 107 ~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 107 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 96 5888877543 234899999999999999999999999 99999999999999999999999998864321
Q ss_pred CCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||............... . .
T Consensus 178 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~--------~ 241 (317)
T cd06635 178 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-E--------S 241 (317)
T ss_pred -------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc-c--------C
Confidence 12245888999999984 456888999999999999999999998754332222111111 0 0
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.......++..+.+++.+||+.+|.+||++.+++++...
T Consensus 242 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 242 PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 111133456789999999999999999999999987544
No 311
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.1e-33 Score=303.79 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=202.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-----ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-----SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 696 (958)
.+|...+.||+|+||.||+|.+. +++.||+|.+... .......+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888899999999999999975 6899999987532 123345788999999999999999999998664 468
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++++|.+++.... .+++..+.+++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 89999999999999997543 3788899999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
...... ........|+..|+|||++.+..++.++|||||||++|||++|+.||..............
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------- 223 (264)
T cd06653 157 QTICMS----GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT--------- 223 (264)
T ss_pred cccccc----CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---------
Confidence 321111 1111234588999999999988899999999999999999999999975443322211110
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+.....|....+.+.+++.+||+ +|..||+..+++.+
T Consensus 224 ~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 224 QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 111234566777889999999999 57999999988764
No 312
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.9e-33 Score=302.37 Aligned_cols=252 Identities=26% Similarity=0.434 Sum_probs=209.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQMLVY 700 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~ 700 (958)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|+||+++++.+... ...++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667789999999999999987 689999999876542 4466799999999999999999999999988 8999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.... .+++.++..++.|+++||+|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999997654 5899999999999999999999998 9999999999999999999999999998654322
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.. .......++..|+|||.+.+..++.++||||||+++|+|++|..||............... ....
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~ 222 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS--------SGEP 222 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc--------cCCC
Confidence 10 0122345888999999998888999999999999999999999999765522222211111 0122
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+...+..+.+++.+|++.+|++||++.+++++
T Consensus 223 ~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 223 PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 33455668899999999999999999999999864
No 313
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.5e-34 Score=308.65 Aligned_cols=246 Identities=25% Similarity=0.338 Sum_probs=204.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4677889999999999999986 58999999987542 2345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++... ..+++.++..++.|+++||.|||+.+ ++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999755 35899999999999999999999998 9999999999999999999999999987543211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcCcchhhhccc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN--IVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~--~~~~~~~~~~~~~~~~~i~~~ 859 (958)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||..... ....... ....
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----------~~~~ 217 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK----------QETA 217 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH----------hccc
Confidence 12234588899999999988899999999999999999999999975442 1111111 1111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCH--HHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSM--SDVVR 894 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~ 894 (958)
....+...+..+.+++.+||+.||.+||++ +|+++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 218 DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 223455667899999999999999999999 66543
No 314
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.9e-33 Score=308.79 Aligned_cols=260 Identities=22% Similarity=0.322 Sum_probs=197.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+++|...+.||+|+||.||+|... +++.||+|++...... ....+.+|+++++.++|+||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 467888899999999999999875 6889999998654322 23467899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|++ +++.+++.... ..+.+.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 84 YMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred ccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 995 78877775433 34778888999999999999999998 99999999999999999999999999875422111
Q ss_pred CCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh-cCcchh-----
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD-SGMVFS----- 854 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~-~~~~~~----- 854 (958)
......++..|+|||++.+. .++.++||||||+++|||++|+.||.......+....... .+....
T Consensus 159 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 159 -------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred -------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence 11223478899999998764 5788999999999999999999999755433222211110 000000
Q ss_pred ------hhcccC-CCCC---------hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 ------IIDNRM-GSYP---------SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ------~i~~~~-~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... ...+ ...+..+.+++.+|+..||++|||++|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000 0000 0124578899999999999999999998753
No 315
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=9.9e-34 Score=308.58 Aligned_cols=241 Identities=24% Similarity=0.338 Sum_probs=194.0
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
||+|+||+||++... +|+.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999875 68999999986532 22344578899999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccce
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTH 788 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 788 (958)
.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.++......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~-------- 149 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-------- 149 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC--------
Confidence 99997665456899999999999999999999999 9999999999999999999999999987543211
Q ss_pred eeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 789 VSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 789 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
......++..|+|||++.+..++.++||||+|+++|||++|+.||............ ...+.......+...+
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 222 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL-------KRRTLEMAVEYPDKFS 222 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHH-------HhccccccccCCccCC
Confidence 112335788999999998888999999999999999999999999654321110000 0001111223344567
Q ss_pred HHHHHHHHHccccCCCCCCCHHH
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSD 891 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~e 891 (958)
..+.+++.+||+.+|++||++++
T Consensus 223 ~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 223 PEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHHHccCChhHccCCCc
Confidence 88999999999999999994444
No 316
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=9.9e-34 Score=308.82 Aligned_cols=241 Identities=23% Similarity=0.306 Sum_probs=189.5
Q ss_pred eeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHH---ccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 632 QVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLS---RLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~---~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
.||+|+||.||++... +++.||+|.+..... .....+.+|..+++ ..+|+|++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999975 689999998865322 22233455554444 3479999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 81 GGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 999999997543 4899999999999999999999999 9999999999999999999999999986442111
Q ss_pred ccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchh-HHHHHHHhhcCcchhhhcccCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNI-VREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.....|+..|+|||.+.+ ..++.++||||+||++|||++|..||...... ........ ......
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---------~~~~~~ 217 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---------LTVNVE 217 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh---------hcCCcC
Confidence 122358999999999864 56889999999999999999999999643211 11111110 011123
Q ss_pred CChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.+...+.++.+++.+|++.||++|| +++|++++
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 3556778899999999999999999 58888875
No 317
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=307.63 Aligned_cols=250 Identities=23% Similarity=0.314 Sum_probs=207.3
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
...+.|..-++||+||||.||-++.+ +|+.+|.|++.+.. ..+..-.+.|-.+|.+++.+.||.+--.+++.+.++
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 34456788899999999999999865 69999999886543 233345678999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
|||..|.||+|.-+|.+.+...++++.++.++.+|+.||++||.+. ||.||+||+|||+|+.|+++|+|.|+|..++
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999999998877677999999999999999999999999 9999999999999999999999999998764
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.. ......+||.+|||||++.+..|+...|.||+||++|||+.|+.||...+.-..+. .+...+.
T Consensus 339 ~g--------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~e-------Evdrr~~ 403 (591)
T KOG0986|consen 339 EG--------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKRE-------EVDRRTL 403 (591)
T ss_pred CC--------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHH-------HHHHHHh
Confidence 32 22234479999999999999999999999999999999999999996433222111 1111111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSM 889 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 889 (958)
.....++...+++..++....++.||.+|.-.
T Consensus 404 ~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 404 EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred cchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 22234567788889999999999999999643
No 318
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.8e-33 Score=307.67 Aligned_cols=259 Identities=25% Similarity=0.356 Sum_probs=199.9
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+|+..+.||+|++|.||+|++. +|+.||||++..... .....+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4777899999999999999986 688999999876432 23456788999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCC-CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 704 PNGTLRDWLSGRT-KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 704 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+ ++|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 7 58999886543 345899999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc----Ccchhhh-
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS----GMVFSII- 856 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~----~~~~~~i- 856 (958)
.......++..|++||++.+. .++.++||||||+++|||++|+.||................ ....+.+
T Consensus 155 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 155 -----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred -----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 111223478899999998664 46889999999999999999999997544322111111000 0000000
Q ss_pred -----ccc--------CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 -----DNR--------MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 -----~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... ........+..+.+++.+|++.||++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 001112345678899999999999999999999863
No 319
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.5e-33 Score=309.32 Aligned_cols=244 Identities=23% Similarity=0.384 Sum_probs=199.3
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHH
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLR 709 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 709 (958)
..||+|+||.||+|..+ +++.||||++........+.+.+|+.+++.++|+|++++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 57999999999999975 78999999987655555667999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCcccee
Q 002158 710 DWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHV 789 (958)
Q Consensus 710 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 789 (958)
+++... .+++..+..++.|++.|++|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 106 ~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-------~~ 172 (292)
T cd06657 106 DIVTHT---RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-------PR 172 (292)
T ss_pred HHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc-------cc
Confidence 988543 3788999999999999999999999 9999999999999999999999999886543211 11
Q ss_pred eeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHH
Q 002158 790 STIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVE 869 (958)
Q Consensus 790 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 869 (958)
.....|++.|+|||++.+..++.++||||+|+++|||++|..||....... ....... . ..... ......+.
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~-~~~~~~~-~-----~~~~~-~~~~~~~~ 244 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRD-N-----LPPKL-KNLHKVSP 244 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh-h-----CCccc-CCcccCCH
Confidence 223458899999999988888999999999999999999999997543321 1111111 0 00011 01223456
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 870 RFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 870 ~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+.+++.+||+.+|.+||++.+++++
T Consensus 245 ~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 245 SLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 78899999999999999999999974
No 320
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=319.95 Aligned_cols=385 Identities=22% Similarity=0.216 Sum_probs=256.0
Q ss_pred CCCCCCCCceeeCccc---------cCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCC
Q 002158 65 DPCMSNWTGVLCFDTV---------ETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSL 135 (958)
Q Consensus 65 ~~c~~~w~gV~C~~~~---------~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L 135 (958)
.+|.|.-.-..|++.- ...-+..++.|||++|.++..-+..|.+|++|+.+.+.+|....||...+...+|
T Consensus 48 a~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl 127 (873)
T KOG4194|consen 48 ATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHL 127 (873)
T ss_pred CcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccce
Confidence 4566666667776421 2223567889999999999999999999999999999999999999887777889
Q ss_pred cEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCC
Q 002158 136 IFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNN 215 (958)
Q Consensus 136 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 215 (958)
+.|+|.+|.|+..-..++..++.|+.|||+.|.|+.+.-+.|..-.++++|+|++|.|+..-.+.|.++.+|..|.|++|
T Consensus 128 ~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrN 207 (873)
T KOG4194|consen 128 EKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRN 207 (873)
T ss_pred eEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccC
Confidence 99999999888666667777778888888888777555556666667777777777777666666666777777777777
Q ss_pred ccccCCCcccCCCCCccEEEccCCCCCCC-----------------------CccccccCCCCCCEEEcccCCCCCCCCC
Q 002158 216 NLSGNLPPELSELPQLCILQLDNNNFSAS-----------------------EIPATYGNFSKLVKLSLRNCNLQGAVPD 272 (958)
Q Consensus 216 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-----------------------~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 272 (958)
+|+...+..|..+++|+.|+|..|+|... .-...|..+.++++|+|+.|+++..-.+
T Consensus 208 rittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g 287 (873)
T KOG4194|consen 208 RITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEG 287 (873)
T ss_pred cccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcc
Confidence 77766666666667777776666666421 1123455566667777777777665553
Q ss_pred -CCCCCCcCEEeccCCcCCCc-CCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcc-cc
Q 002158 273 -LSRIPNLYYLDLSWNHLTGS-IPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQN-KS 349 (958)
Q Consensus 273 -l~~l~~L~~L~Ls~N~l~~~-~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~-~~ 349 (958)
+.+++.|+.|+||+|.|... +....+.++|++|+|++|+|+...+..|..|..|++|+|++|.|+ .+.+..|.. .+
T Consensus 288 ~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lss 366 (873)
T KOG4194|consen 288 WLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSS 366 (873)
T ss_pred cccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhh
Confidence 67777888888888877643 333456688888888888888877777766666666666666655 333332221 11
Q ss_pred cC----------------------ccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCCcccccCCC
Q 002158 350 FS----------------------TKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAG 405 (958)
Q Consensus 350 ~~----------------------~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 405 (958)
+. .+.|..|+|.+|+|..|+... ++++|+.|+|.+|++.+.- ...|-.. ..
T Consensus 367 L~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq----~nAFe~m-~L 441 (873)
T KOG4194|consen 367 LHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQ----PNAFEPM-EL 441 (873)
T ss_pred hhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeec----ccccccc-hh
Confidence 11 334455555555555555433 5555555666555553211 0111111 23
Q ss_pred CCccccccCCCCCCCCCCCCCcccc-cCCCCCCceeeeeceee-eeecCCCC
Q 002158 406 GDETLTNSKVNCPVQACPVDNFFEY-VPASPEPCFCAAPLRIG-YRLKSPSF 455 (958)
Q Consensus 406 ~~~~L~~n~~~C~c~~~~~~~~~~~-~~~~~~~~~c~sp~~~~-~~~~~~~~ 455 (958)
..+.++...+-|||++.|+..|+.. .........|+.|+-.. ..+.+.+.
T Consensus 442 k~Lv~nSssflCDCql~Wl~qWl~~~~lq~sv~a~CayPe~Lad~~i~svd~ 493 (873)
T KOG4194|consen 442 KELVMNSSSFLCDCQLKWLAQWLYRRKLQSSVIAKCAYPEPLADQSIVSVDT 493 (873)
T ss_pred hhhhhcccceEEeccHHHHHHHHHhcccccceeeeccCCcccccceeEeech
Confidence 3445566677899999999999943 33333348999998765 44444443
No 321
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.3e-33 Score=308.46 Aligned_cols=260 Identities=23% Similarity=0.307 Sum_probs=198.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|+..+.||+|++|+||+|.++ +++.||+|.+..... ...+.+.+|++++++++|+||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 36778889999999999999986 688999998865432 223568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeeeeecccccCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~~~~ 780 (958)
|++ ++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||+++. ++.+||+|||+++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 68888886555445688888999999999999999998 999999999999985 5679999999997542211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh---
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII--- 856 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i--- 856 (958)
.......|++.|+|||++.+. .++.++||||+|+++|||+||+.||................+......
T Consensus 158 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 158 -------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred -------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 111223578899999998764 578899999999999999999999976543322222111100000000
Q ss_pred ----------cccC-----CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 ----------DNRM-----GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ----------~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.... .......+..+.+++.+|++.+|++||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00112345678899999999999999999999974
No 322
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.7e-33 Score=317.90 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=199.6
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------ 693 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 693 (958)
...+|+..+.||+|+||.||+|... +++.||||.+... ......++.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3467888899999999999999975 7899999998643 233345678899999999999999999998643
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
...++||||++ ++|.+++... ++...+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 6898888532 788899999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV- 852 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~- 852 (958)
+...... ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||........+.......+..
T Consensus 166 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (353)
T cd07850 166 RTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS 237 (353)
T ss_pred eeCCCCC--------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 7542211 1123457889999999999999999999999999999999999997554322221111100000
Q ss_pred -------------------------h-hhhcccC-----CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 -------------------------F-SIIDNRM-----GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 -------------------------~-~~i~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. +...... ...+...+..+.+++.+||+.||++||++.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0000000 00022346678999999999999999999999975
No 323
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.3e-33 Score=299.93 Aligned_cols=247 Identities=27% Similarity=0.482 Sum_probs=207.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|+|++++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 3677889999999999999976 678999999877543 3456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999999755 34899999999999999999999999 999999999999999999999999999865332211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.....|+..|+|||...+..++.++||||+|+++|||++|+.||............. ......
T Consensus 156 -------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~----------~~~~~~ 218 (254)
T cd06627 156 -------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV----------QDDHPP 218 (254)
T ss_pred -------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh----------ccCCCC
Confidence 123458889999999988888899999999999999999999997554332222111 112223
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
.+...+..+.+++.+|+..+|++||++.+++.
T Consensus 219 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 219 LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 44556788999999999999999999999985
No 324
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2e-33 Score=302.08 Aligned_cols=250 Identities=28% Similarity=0.454 Sum_probs=208.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|...+.||+|+||.||++.+. +++.||+|++..... ...+.+.+|+++++.++|+|++++++.+..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4677789999999999999986 688999999876533 4556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 703 VPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 703 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
+++++|.+++.... ...+++.++..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 356999999999999999999999998 9999999999999999999999999987653221
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.......|++.|+|||......++.++||||+|+++++|++|+.||..... ....... .....
T Consensus 158 -------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-~~~~~~~---------~~~~~ 220 (258)
T cd08215 158 -------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-LELALKI---------LKGQY 220 (258)
T ss_pred -------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-HHHHHHH---------hcCCC
Confidence 122234588899999999988899999999999999999999999965432 1111111 11222
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+..++..+.+++.+||..+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 33445667889999999999999999999999863
No 325
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-33 Score=304.46 Aligned_cols=241 Identities=26% Similarity=0.361 Sum_probs=198.0
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999986 489999999875422 3346789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccce
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTH 788 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 788 (958)
.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------- 147 (262)
T cd05572 81 WTILRDRG--LFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------- 147 (262)
T ss_pred HHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--------
Confidence 99997543 3889999999999999999999998 9999999999999999999999999987653211
Q ss_pred eeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch-hHHHHHHHhhcCcchhhhcccCCCCChHH
Q 002158 789 VSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN-IVREVNVARDSGMVFSIIDNRMGSYPSEC 867 (958)
Q Consensus 789 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 867 (958)
......|+..|+|||.+.+..++.++|+||+|+++|||++|..||..... .......... .......|...
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 219 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK--------GNGKLEFPNYI 219 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc--------cCCCCCCCccc
Confidence 11234588899999999888899999999999999999999999975542 1111111110 01122344455
Q ss_pred HHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002158 868 VERFVTLALRCCHDKPEHRPS-----MSDVVR 894 (958)
Q Consensus 868 ~~~l~~li~~cl~~dP~~RPs-----~~evl~ 894 (958)
+..+.+++.+||+.+|++||+ ++|+++
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 788999999999999999999 677665
No 326
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.9e-33 Score=305.66 Aligned_cols=255 Identities=24% Similarity=0.290 Sum_probs=194.2
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccC-CCCcceEEEEEEeC--CeEEEEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEE--GEQMLVYE 701 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~~~lV~E 701 (958)
|...+.||+|+||.||+|... +++.||+|+++... ........+|+.+++++. |+|++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 456788999999999999975 68899999987542 222334567999999995 99999999999887 89999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|++ ++|.+++.... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++. +.+||+|||+++.......
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 996 68888886543 35899999999999999999999999 999999999999999 9999999999975532111
Q ss_pred CCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh----hh
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS----II 856 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----~i 856 (958)
.....++..|+|||++.. ..++.++|||||||++|||++|..||................+.... ..
T Consensus 155 --------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 155 --------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred --------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence 112357889999998754 45788999999999999999999999754432211111100000000 00
Q ss_pred cc------c--------CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DN------R--------MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~------~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. . ........+..+.+++.+||+.+|++||++++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0 000112456889999999999999999999999864
No 327
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.8e-33 Score=309.14 Aligned_cols=260 Identities=25% Similarity=0.293 Sum_probs=197.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--cHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 698 (958)
.++|+..+.||+|+||.||+|.+. +|+.||+|+++..... ....+.+|++++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 356888899999999999999986 6899999998654322 123567899999999999999999998754 56899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||++ ++|.+++.... ..+++.++..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999996 58998887543 45899999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh-
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII- 856 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i- 856 (958)
... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||................+.....+
T Consensus 161 ~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 161 PAK-------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred ccC-------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 211 1122335788999999876 4578899999999999999999999975543322211111100000000
Q ss_pred --------------c-ccCCC---CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 --------------D-NRMGS---YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 --------------~-~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ..... .....++.+.+++.+|++.||++||+++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00000 001235678899999999999999999999974
No 328
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.4e-33 Score=304.97 Aligned_cols=257 Identities=27% Similarity=0.351 Sum_probs=197.4
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--cHHHHHHHHHHHHcc---CCCCcceEEEEEEeCCe-----
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRL---HHRNLVSLLGYCDEEGE----- 695 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~----- 695 (958)
|+..+.||+|+||.||+|.++ +++.||+|++...... ....+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 556789999999999999987 4899999998743222 234566788877666 59999999999988776
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.+++|||++ ++|.+++.......+++..+..++.|+++||+|||+.+ ++|+||+|+||+++.++.+||+|||++..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 999999996 58999987654446899999999999999999999998 99999999999999999999999999876
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc---
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV--- 852 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~--- 852 (958)
...... .....++..|+|||++.+..++.++||||||+++|||++|+.||...................
T Consensus 157 ~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 157 YSFEMA--------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEE 228 (287)
T ss_pred ccCCcc--------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChH
Confidence 532211 112347889999999999999999999999999999999999987544322111111100000
Q ss_pred ---------hhhhcccC----CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 ---------FSIIDNRM----GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ---------~~~i~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........ .......+..+.+++.+||+.||++||+++|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 00000000 11122455778899999999999999999999863
No 329
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.8e-33 Score=315.38 Aligned_cols=261 Identities=24% Similarity=0.336 Sum_probs=197.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC-----eE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG-----EQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~ 696 (958)
.++|...+.||+|+||.||+|.+. +|+.||||++... ......++.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 357888999999999999999975 6899999998643 2233456889999999999999999999876543 57
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||++ ++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999996 5888888643 3899999999999999999999999 999999999999999999999999998765
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh--hcC---
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR--DSG--- 850 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~--~~~--- 850 (958)
...... ........|+..|+|||.+.+ ..++.++||||+||++|||++|+.||.............. ...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 157 DPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred cccccc----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 332211 111223568999999998765 4688899999999999999999999965432211111000 000
Q ss_pred cchhhhcc----------cCCC-----CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 851 MVFSIIDN----------RMGS-----YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 851 ~~~~~i~~----------~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+... .... .....+..+.+++.+||+.+|++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 0000 011235678999999999999999999999986
No 330
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=334.95 Aligned_cols=264 Identities=28% Similarity=0.489 Sum_probs=213.4
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEEC----C----CcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEE
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILS----D----NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGY 689 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~ 689 (958)
++...++....+.||+|.||.|++|... . ...||||.++... ..+.+.+..|+++|+.+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 4444555566679999999999999843 1 4579999998753 34567899999999999 59999999999
Q ss_pred EEeCCeEEEEEEecCCCCHHHHhccCC------C--------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCcc
Q 002158 690 CDEEGEQMLVYEFVPNGTLRDWLSGRT------K--------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKAS 755 (958)
Q Consensus 690 ~~~~~~~~lV~E~~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~ 755 (958)
|...+..++|+||+..|+|.++++.++ . ..++....+.++.|||.|++||++.. +||||+.++
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaR 447 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAAR 447 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhh
Confidence 999999999999999999999998655 0 13888999999999999999999998 999999999
Q ss_pred ceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccC--CCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCC
Q 002158 756 NILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKG--TPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQP 832 (958)
Q Consensus 756 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P 832 (958)
|||+.++..+||+|||+|+.....+. .....-.| ...|||||.+....|+.|+|||||||+||||+| |..|
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~------y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~P 521 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDY------YRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTP 521 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCc------eEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCC
Confidence 99999999999999999985432221 11111122 345999999999999999999999999999999 8889
Q ss_pred CCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 833 ISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
|.+-......+. ... ++.+...|..|..+++++|+.||+.+|++||++.++++.++..+.
T Consensus 522 Yp~~~~~~~l~~-~l~--------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 522 YPGIPPTEELLE-FLK--------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred CCCCCcHHHHHH-HHh--------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 975221222221 111 222335578889999999999999999999999999999999664
No 331
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.3e-33 Score=304.38 Aligned_cols=257 Identities=25% Similarity=0.356 Sum_probs=202.2
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
|...+.||+|++|.||+|... +++.+++|.+...... ....+.+|++++++++|+||+++++++..++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456788999999999999975 6889999998764322 3567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
+ ++|.+++.... ..+++.++..++.|+++||+|||+.+ |+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 81 D-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred C-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 6 48988887643 45899999999999999999999999 9999999999999999999999999987653321
Q ss_pred CccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh----hhcc
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS----IIDN 858 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~----~i~~ 858 (958)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||................+.... ....
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchh
Confidence 111223578889999999877 7889999999999999999999999765543322211111110000 0000
Q ss_pred ------------c---CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 ------------R---MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ------------~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ........+.++.+++.+||+.||.+||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 011123467889999999999999999999999863
No 332
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.8e-33 Score=307.20 Aligned_cols=263 Identities=26% Similarity=0.316 Sum_probs=199.7
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC----
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG---- 694 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 694 (958)
...++|+..+.||+|+||.||+|.++ +++.||+|+++... ......+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35567888999999999999999986 58899999986542 223356788999999999999999999987654
Q ss_pred ------eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEe
Q 002158 695 ------EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 695 ------~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
..++||||+++ ++.+.+... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeC
Confidence 78999999975 787777654 335899999999999999999999999 9999999999999999999999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
|||+++....... .......++..|+|||.+.+. .++.++|||||||++|||++|+.||..............
T Consensus 159 dfg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 159 DFGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232 (302)
T ss_pred cccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 9999876533221 111223467789999988653 568899999999999999999999975443222111111
Q ss_pred hcCcc-----hhh--------hccc------CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 848 DSGMV-----FSI--------IDNR------MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 848 ~~~~~-----~~~--------i~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+.. ... .+.. ........+..+.+++.+||+.+|.+||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000 000 0000 000111246788999999999999999999999863
No 333
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-35 Score=344.18 Aligned_cols=257 Identities=26% Similarity=0.351 Sum_probs=210.1
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
..+-+++....||.|.||.||.|... +|.-.|+|-++.. .....+...+|..++..++|||+|+++|+-.+.+..+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 34456778889999999999999954 6888999976543 23334567899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
-||||++|+|.+.+...+ ..++.....+..|++.|++|||++| ||||||||.||+++.+|.+|++|||.|.....
T Consensus 1312 FMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecC
Confidence 999999999999996443 3677777788899999999999999 99999999999999999999999999987643
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCC---CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
. .++.+ ..-....||+-|||||++.+.. ...++||||+||++.||+||+.||...++..+.+. .+
T Consensus 1387 ~--~~~~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy---------~V 1454 (1509)
T KOG4645|consen 1387 N--AQTMP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMY---------HV 1454 (1509)
T ss_pred c--hhcCC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHh---------HH
Confidence 2 11222 2223567999999999997643 55689999999999999999999986555443332 22
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+.+++|.....+-.+++.+|++.||+.|.++.|++++
T Consensus 1455 ~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1455 AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 2334456677788889999999999999999999888764
No 334
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4e-33 Score=309.89 Aligned_cols=262 Identities=24% Similarity=0.315 Sum_probs=195.9
Q ss_pred CCCCCceeeeeCCeEEEEEEECC---CcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSD---NTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQM 697 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 697 (958)
.|...+.||+|+||.||+|.+.. ++.||+|.+.... ....+.+.+|+.++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 36777899999999999999754 7899999987632 23345678899999999999999999999888 7899
Q ss_pred EEEEecCCCCHHHHhccCC---CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC----CCCeEEeee
Q 002158 698 LVYEFVPNGTLRDWLSGRT---KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS----NLNAKVADF 770 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~----~~~~kl~DF 770 (958)
+||||++ +++.+++.... ...++...+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 47777764322 235889999999999999999999999 999999999999999 899999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhH---------
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIV--------- 840 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~--------- 840 (958)
|+++........ ........++..|+|||++.+. .++.++||||||+++|||++|+.||.......
T Consensus 157 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 232 (316)
T cd07842 157 GLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRD 232 (316)
T ss_pred ccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHH
Confidence 999865332211 1112234678999999988764 57889999999999999999999996432211
Q ss_pred ---HHHHHHh-----------hcCcchhhh-cccCCCCC-----------hHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 841 ---REVNVAR-----------DSGMVFSII-DNRMGSYP-----------SECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 841 ---~~~~~~~-----------~~~~~~~~i-~~~~~~~~-----------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
..+.... ......... .......+ ......+.+++.+|++.||++||++.|+++
T Consensus 233 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 233 QLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 000000000 00000111 023456889999999999999999999986
Q ss_pred H
Q 002158 895 E 895 (958)
Q Consensus 895 ~ 895 (958)
+
T Consensus 313 ~ 313 (316)
T cd07842 313 H 313 (316)
T ss_pred C
Confidence 4
No 335
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5.5e-33 Score=307.54 Aligned_cols=245 Identities=27% Similarity=0.436 Sum_probs=197.1
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.|+..+.||+|+||.||+|+.. +++.||+|.+... ......++.+|+++++.++|+|++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3555678999999999999976 6788999988642 22334568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+. |++.+++.... ..+++.++..++.|++.|+.|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 96 ~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~--- 167 (308)
T cd06634 96 YCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 167 (308)
T ss_pred ccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecC---
Confidence 996 68888775433 34889999999999999999999998 99999999999999999999999999875421
Q ss_pred CCCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
.....|+..|+|||++. ...++.++|||||||++|||++|..||.............. .
T Consensus 168 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----------~ 229 (308)
T cd06634 168 --------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----------N 229 (308)
T ss_pred --------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh----------c
Confidence 12245888999999985 34678899999999999999999999865433221111111 1
Q ss_pred cCC-CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 859 RMG-SYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 859 ~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
... ..+..++..+.+++.+||+.+|++||++++++++-
T Consensus 230 ~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 230 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred CCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 111 11335667899999999999999999999999763
No 336
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.3e-33 Score=298.78 Aligned_cols=248 Identities=26% Similarity=0.414 Sum_probs=205.8
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+|+..+.||+|+||.||++... +++.+|+|.+.... .....++.+|++++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4677889999999999999876 68899999987532 33355788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 703 VPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 703 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999986522 345899999999999999999999999 999999999999999999999999999765332
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
......|+..|+|||.+.+..++.++|+||+|+++|||++|+.||....... .. .. ......
T Consensus 157 --------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-~~-~~--------~~~~~~ 218 (256)
T cd08530 157 --------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-LR-YK--------VQRGKY 218 (256)
T ss_pred --------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HH-HH--------HhcCCC
Confidence 1112347889999999999999999999999999999999999997544221 11 11 111222
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+...+.++.+++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 33445677889999999999999999999999864
No 337
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.2e-33 Score=313.62 Aligned_cols=264 Identities=26% Similarity=0.392 Sum_probs=200.5
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC--CeE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE--GEQ 696 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~--~~~ 696 (958)
..++|+..+.||+|+||.||+|.+. +++.||||++... .......+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3456778889999999999999976 6889999988542 233345678899999999 999999999998653 368
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||++ ++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999996 6999998754 4889999999999999999999998 999999999999999999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc---
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV--- 852 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~--- 852 (958)
....... .........|+..|+|||++.+ ..++.++||||||+++|||++|+.||................+..
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 158 SELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 4322111 0112233568999999998765 457889999999999999999999997544322211111110000
Q ss_pred ----------hhhhc---cc----CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 ----------FSIID---NR----MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ----------~~~i~---~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...++ .. ........+.++.+++.+||+.+|++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000 00 011112256788999999999999999999999975
No 338
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.7e-33 Score=306.68 Aligned_cols=263 Identities=23% Similarity=0.335 Sum_probs=195.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCC-------
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG------- 694 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------- 694 (958)
++|+..+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 36788899999999999999976 689999998864322 22345678999999999999999999987654
Q ss_pred -eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 695 -EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 695 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
..++||||++ ++|.+++.... ..+++.++..++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCc
Confidence 4599999995 58888886543 34899999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||..............-.+..
T Consensus 167 ~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 167 RAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred ccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 8653322111 1111234578899999998765 36889999999999999999999997544322111111000000
Q ss_pred h----------hhhcc-cCC-CC---------ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 F----------SIIDN-RMG-SY---------PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~----------~~i~~-~~~-~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ...+. ... .. +......+.+++.+||+.||++||+++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0 00000 000 00 00113456789999999999999999999864
No 339
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=283.41 Aligned_cols=255 Identities=23% Similarity=0.358 Sum_probs=200.0
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccC-CCCcceEEEEEE
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCD 691 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~ 691 (958)
....|++.. ..||.|+.|.|++++.+ .|...|||.+... ..++.++++..++++..-+ +|.||+-+|||.
T Consensus 89 ~dindl~~l-------~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi 161 (391)
T KOG0983|consen 89 ADINDLENL-------GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI 161 (391)
T ss_pred cChHHhhhH-------HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence 345555543 45999999999999976 5899999998765 4555678889998887775 999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeee
Q 002158 692 EEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFG 771 (958)
Q Consensus 692 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 771 (958)
.....++.||.| .-.++.+++. -.+++++..+-++...+..||.||.+++. |+|||+||+|||+|+.|++|+||||
T Consensus 162 ~n~dV~IcMelM-s~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILlDe~GniKlCDFG 237 (391)
T KOG0983|consen 162 TNTDVFICMELM-STCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGNIKLCDFG 237 (391)
T ss_pred eCchHHHHHHHH-HHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEEccCCCEEeeccc
Confidence 999999999999 3455666543 34558888889999999999999998764 9999999999999999999999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhcc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~ 848 (958)
++-.+.. ....+...|-+.|||||.+.- ..|+.++||||||++++||.||+.||..-+...+.+....+
T Consensus 238 IsGrlvd--------SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln 309 (391)
T KOG0983|consen 238 ISGRLVD--------SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN 309 (391)
T ss_pred ccceeec--------ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh
Confidence 9865532 222334568899999999853 46888999999999999999999999864433332222211
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... +.+ .........+.+++..|+++|+.+||.+.+++++
T Consensus 310 ~eP------P~L-~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 310 EEP------PLL-PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred cCC------CCC-CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 110 111 1112367889999999999999999999999975
No 340
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.5e-33 Score=299.12 Aligned_cols=242 Identities=24% Similarity=0.296 Sum_probs=189.7
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh---cHHHHHHHHHHH-HccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ---GQNEFLTEIKLL-SRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||.||+|... +++.||||.+...... ....+..|..++ ...+|+|++++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999975 6889999998754321 223345555544 455899999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
++|.++++... .+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++....
T Consensus 82 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 82 GDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-------
Confidence 99999997543 4889999999999999999999998 99999999999999999999999999875321
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
.....|+..|+|||.+.+..++.++||||||+++|||++|..||....... .......... ........
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~------~~~~~~~~ 218 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFDNILSRRI------NWPEEVKE 218 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhccc------CCCCcccc
Confidence 123458889999999988888999999999999999999999997544321 1111111000 00011223
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.++..+.+++.+||+.+|++||++.++.+.
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 457889999999999999999977554443
No 341
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=7.3e-33 Score=303.12 Aligned_cols=258 Identities=25% Similarity=0.340 Sum_probs=198.4
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEEEEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQMLVYE 701 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~E 701 (958)
|+..+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 456788999999999999986 58899999997653 33345688999999999999999999999888 89999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|++ ++|.+++.... ..+++..+..++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 997 58999987543 35899999999999999999999998 99999999999999999999999999986533221
Q ss_pred CCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc----h---
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV----F--- 853 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~----~--- 853 (958)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||................+.. .
T Consensus 156 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 156 ------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred ------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 11122346788999998765 457889999999999999999999997544322111111000000 0
Q ss_pred -h-----hhcccC-------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 -S-----IIDNRM-------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 -~-----~i~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ...... ..+...++..+.+++.+||+.+|++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 000000 00011126788999999999999999999999863
No 342
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.5e-33 Score=302.70 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=197.9
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
||+|+||.||++.+. +++.||+|.+..... ...+.+.+|++++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999987 489999999876433 3456788999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC-Cccc
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG-TMPT 787 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~-~~~~ 787 (958)
.++++... .+++..+..++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||++.......... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99997644 4899999999999999999999999 9999999999999999999999999987543221100 0001
Q ss_pred eeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHH
Q 002158 788 HVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSEC 867 (958)
Q Consensus 788 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 867 (958)
.......++..|+|||......++.++||||||+++||+++|..||...... ........ .....+..+
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~~~~~~----------~~~~~~~~~ 224 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-EIFQNILN----------GKIEWPEDV 224 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhc----------CCcCCCccc
Confidence 1223355888999999999888999999999999999999999999754422 11111111 011122222
Q ss_pred --HHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 868 --VERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 868 --~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
+..+.+++.+||+.+|++||++.++.+.|
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred cCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 68889999999999999999995555443
No 343
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.4e-33 Score=312.99 Aligned_cols=263 Identities=22% Similarity=0.317 Sum_probs=201.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEe----CCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE----EGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~ 696 (958)
..+|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888899999999999999976 68999999987542 2334567889999999999999999998753 3468
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+. ++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 69999996543 3899999999999999999999998 999999999999999999999999998765
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc----
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM---- 851 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~---- 851 (958)
...... .........|+..|+|||.+.+ ..++.++||||||+++|||++|+.||................+.
T Consensus 158 ~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 158 SSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred cccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 332211 1111223468899999999866 45888999999999999999999999754432211111110000
Q ss_pred ---------chhhhcc--cCCCC-----ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 ---------VFSIIDN--RMGSY-----PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ---------~~~~i~~--~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+.. ..... ....+..+.+++.+||+.+|++||++++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000000 00111 12356789999999999999999999999975
No 344
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.9e-33 Score=299.23 Aligned_cols=248 Identities=18% Similarity=0.253 Sum_probs=192.8
Q ss_pred HHHHHHcCCCCCcee--eeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCC
Q 002158 619 ELAMATAYFSSSTQV--GQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEG 694 (958)
Q Consensus 619 el~~~~~~~~~~~~l--g~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 694 (958)
+.....++|...+.+ |+|+||.||++..+ ++..+|+|.+........ |+.....+ +|+|++++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 333444566666666 99999999999975 688899999865322211 22222222 7999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-CeEEeeeeee
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-NAKVADFGLS 773 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla 773 (958)
..++||||+++++|.+++.... .+++.++..++.|+++||+|||+.+ ++||||||+||+++.++ .++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999997654 5899999999999999999999999 99999999999999998 9999999998
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
+..... ....|+..|+|||++.+..++.++||||||+++|||++|+.||..............
T Consensus 158 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~------ 220 (267)
T PHA03390 158 KIIGTP-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLL------ 220 (267)
T ss_pred eecCCC-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHH------
Confidence 754211 123588999999999998999999999999999999999999974332110000000
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPS-MSDVVR 894 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 894 (958)
... ......+...+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 221 ~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 221 KRQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred Hhh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 000 1111233456788999999999999999995 688885
No 345
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-34 Score=287.26 Aligned_cols=269 Identities=23% Similarity=0.351 Sum_probs=210.7
Q ss_pred ChHHHHHHHcCCCCCceeeeeCCeEEEEEE-ECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeC
Q 002158 616 KFKELAMATAYFSSSTQVGQGGYGKVYKGI-LSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEE 693 (958)
Q Consensus 616 ~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~ 693 (958)
+++++..-|. +.||+|+||.|-.++ ..+|..+|||++.+.....+.+..+|++++.+.+ |+||+.++++|+++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 4666666664 679999999999887 5689999999998876667788999999999995 99999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC---CeEEeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL---NAKVADF 770 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~---~~kl~DF 770 (958)
+.+|||||.|.||+|..+|+++. .+++.++-++..+||.||.+||.+| |.|||+||+|||-.+.. -+||+||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecc
Confidence 99999999999999999997654 4999999999999999999999999 99999999999996654 3899999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCch-hHHH--
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKN-IVRE-- 842 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~-~~~~-- 842 (958)
.++.-.....+-...........+|+..|||||+.. ...|+.+.|.||+||++|-|++|-+||.+.=. ...|
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 987644333322222233344567999999999873 23588899999999999999999999964110 0000
Q ss_pred --HHHHhhcCcchhhhcccCCCCChH----HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 843 --VNVARDSGMVFSIIDNRMGSYPSE----CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 843 --~~~~~~~~~~~~~i~~~~~~~~~~----~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+-...+ ..+++-|.....++|.. ++.+..+++...+..|+.+|.++.+++++
T Consensus 304 Ge~Cr~CQ-~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 304 GEVCRVCQ-NKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCccHHHH-HHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 000000 12333444444455543 45677889999999999999999999873
No 346
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-34 Score=316.27 Aligned_cols=264 Identities=26% Similarity=0.382 Sum_probs=201.9
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------CeEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------GEQML 698 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~l 698 (958)
|...+.||+|+||.||+|+.+ .|+.||||.++.. .....++..+|+++|++++|+|||+++++-++. ....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 344568999999999999965 7999999999764 344566788999999999999999999986543 35789
Q ss_pred EEEecCCCCHHHHhccCC-CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec--CCC--CeEEeeeeee
Q 002158 699 VYEFVPNGTLRDWLSGRT-KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD--SNL--NAKVADFGLS 773 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~--~~~--~~kl~DFGla 773 (958)
|||||.+|+|+..+.+-. ...+++.+.+.++.+++.||.|||+++ |+||||||.||++- ++| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999999997533 345999999999999999999999999 99999999999993 334 4799999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchh-----HHHHHHHh
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNI-----VREVNVAR 847 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~-----~~~~~~~~ 847 (958)
+.++. ......++||..|++||.+.. +.|+..+|.|||||++||.+||..||..-... ..+.....
T Consensus 172 rel~d--------~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tk 243 (732)
T KOG4250|consen 172 RELDD--------NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITK 243 (732)
T ss_pred ccCCC--------CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhcc
Confidence 96643 224567889999999999985 78899999999999999999999999653322 11111111
Q ss_pred hcCcchhhh---ccc-------C---CCCChHHHHHHHHHHHHccccCCCCCC--CHHHHHHHHHHhHh
Q 002158 848 DSGMVFSII---DNR-------M---GSYPSECVERFVTLALRCCHDKPEHRP--SMSDVVRELENILK 901 (958)
Q Consensus 848 ~~~~~~~~i---~~~-------~---~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~~~~ 901 (958)
+........ ++. + ....+.....+...+..++..+|++|. .+.+....+.+++.
T Consensus 244 kp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 244 KPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred CCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 111110000 000 0 112234455667777788889999998 77777777666653
No 347
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=5.9e-33 Score=305.57 Aligned_cols=249 Identities=23% Similarity=0.372 Sum_probs=195.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccCC-hhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|+..+.||+|+||.||+|.+++ ++.||||.+.... .....++..|+.++.+.. |+||+++++++..+...++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 456778899999999999999874 8999999987643 233456777888777775 9999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|++ +++.+++.... ..+++..+..++.|++.||+|||+ .+ |+||||+|+||++++++.+||+|||++.......
T Consensus 95 ~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 95 LMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred ccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 984 57877775433 358999999999999999999997 47 9999999999999999999999999987542211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCC----CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
. .....++..|+|||++.+.. ++.++||||||+++|||++|+.||.......+.......
T Consensus 170 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-------- 233 (296)
T cd06618 170 A--------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQ-------- 233 (296)
T ss_pred c--------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhc--------
Confidence 1 11234788999999987554 788999999999999999999999653332222211111
Q ss_pred cccCCCC--ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSY--PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... ...++.++.+++.+||+.||++||++++++++
T Consensus 234 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 234 -EEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -CCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111 12356789999999999999999999999875
No 348
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=290.11 Aligned_cols=250 Identities=24% Similarity=0.324 Sum_probs=207.9
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcH---HHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQ---NEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.-++|+..++||+|.||+|-.++-+ .++.+|+|++++...-.. ..-+.|-++|+.-+||.+..+--.+...+.+++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 3456777889999999999999866 799999999987644333 345679999999999999999888999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||..||.|.-+|...+ .+++.....+...|+.||.|||+++ ||.||+|-+|.|+|.||.+||+|||+++....
T Consensus 246 VMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhccc
Confidence 999999999999987544 4899999999999999999999998 99999999999999999999999999984322
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
. ......++||+.|+|||++....|..++|.|.+||+||||++|+.||...+. +.++++|--
T Consensus 321 ~-------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh-----------~kLFeLIl~ 382 (516)
T KOG0690|consen 321 Y-------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH-----------EKLFELILM 382 (516)
T ss_pred c-------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch-----------hHHHHHHHh
Confidence 1 2345678999999999999999999999999999999999999999974332 223333322
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.--.+|....++...|+...+.+||.+|. .+.||.++
T Consensus 383 ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 383 EDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred hhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 22346777888899999999999999994 34555543
No 349
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.5e-33 Score=353.46 Aligned_cols=325 Identities=30% Similarity=0.501 Sum_probs=225.6
Q ss_pred eeeEEEEccCCcCCCCccccccCCCCcceeeccCc-ccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEec
Q 002158 86 LHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWND-LTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQV 164 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~-~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 164 (958)
.+++.|+|.+|++++.+|..++++++|+.|.+++| +.+.+|..+.++++|++|+|++|.+++.+|..+.++++|++|++
T Consensus 236 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l 315 (968)
T PLN00113 236 TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHL 315 (968)
T ss_pred CCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEEC
Confidence 36777788888887777777888888888777644 55677777777777777777777777777777777777777777
Q ss_pred ccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCC----------------
Q 002158 165 DENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSEL---------------- 228 (958)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l---------------- 228 (958)
++|.+++.+|..+..+++|+.|+|++|.+++.+|..++.+++|+.|++++|++++.+|..+..+
T Consensus 316 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~ 395 (968)
T PLN00113 316 FSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGE 395 (968)
T ss_pred CCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEeccc
Confidence 7777777777777777777777777777776677667767777777776666665555555444
Q ss_pred --------CCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCCC
Q 002158 229 --------PQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKLS 299 (958)
Q Consensus 229 --------~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 299 (958)
++|+.|+|++|+++ ..+|..+.++++|+.|+|++|++++.++. +..+++|+.|+|++|++.+.+|.....
T Consensus 396 ~p~~~~~~~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~ 474 (968)
T PLN00113 396 IPKSLGACRSLRRVRLQDNSFS-GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS 474 (968)
T ss_pred CCHHHhCCCCCCEEECcCCEee-eECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccccc
Confidence 45555555555554 23455555555555666666665555543 555666666666667666666665556
Q ss_pred CCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccC-C-CCCCc
Q 002158 300 ENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGD-L-TLPNN 377 (958)
Q Consensus 300 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~-~-~l~~L 377 (958)
.+|+.|+|++|++++..|..|.++++|+.|+|++|++++.+|..+..+. .|+.|+|++|+++..... . .+++|
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-----~L~~L~Ls~N~l~~~~p~~~~~l~~L 549 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCK-----KLVSLDLSHNQLSGQIPASFSEMPVL 549 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCcc-----CCCEEECCCCcccccCChhHhCcccC
Confidence 7788888888888888888888888888888888888888888775543 456889999988875433 3 78888
Q ss_pred ceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCC
Q 002158 378 VTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQ 420 (958)
Q Consensus 378 ~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~ 420 (958)
+.|+|++|++...- + ..+........+.+.+|++.+..+
T Consensus 550 ~~L~Ls~N~l~~~~--p--~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 550 SQLDLSQNQLSGEI--P--KNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CEEECCCCcccccC--C--hhHhcCcccCEEeccCCcceeeCC
Confidence 89999998885321 1 122233445667777777766554
No 350
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.4e-32 Score=305.07 Aligned_cols=244 Identities=28% Similarity=0.455 Sum_probs=195.6
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
|...+.||+|+||+||+|+.. +++.||+|++.... ......+.+|+++++.++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999975 68899999986432 22335688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ |++.+++.... ..+++.++..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 95 68888876433 34899999999999999999999999 99999999999999999999999998763211
Q ss_pred CCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.....|+..|+|||++. ...++.++||||||+++|||++|..||............... . .
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~--------~ 237 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-D--------S 237 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-C--------C
Confidence 12345888999999984 356788999999999999999999999765432222211111 0 0
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........+..+.+++.+||+.+|.+||++.+++++
T Consensus 238 ~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011122345678999999999999999999999964
No 351
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.4e-33 Score=304.05 Aligned_cols=254 Identities=23% Similarity=0.283 Sum_probs=200.4
Q ss_pred CCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCC----hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGS----LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 697 (958)
|+..+.||+|+||.||++... +++.||||+++... ....+.+.+|+++++++ +|+||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 666789999999999999853 57889999987532 22345688999999999 5999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++...
T Consensus 82 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 82 LILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 9999999999999996543 4889999999999999999999998 9999999999999999999999999987643
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCC--CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
.... .......|+..|+|||.+.+.. .+.++||||||+++|||++|..||.............. .
T Consensus 157 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~ 223 (288)
T cd05583 157 AEEE------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR-------R 223 (288)
T ss_pred cccc------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH-------H
Confidence 2211 1112345889999999987665 77899999999999999999999953321111000000 0
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
+.......+...+..+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 224 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 224 ILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 1111123344566788999999999999999999888776554
No 352
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.5e-33 Score=301.76 Aligned_cols=241 Identities=23% Similarity=0.291 Sum_probs=189.2
Q ss_pred eeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHH---HHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 632 QVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIK---LLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
.||+|+||.||+|... +++.||+|.+..... .....+..|.. .++...||||+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999875 588999998865322 11223444444 4445579999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---- 151 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC----
Confidence 99999999654 34899999999999999999999998 9999999999999999999999999987542111
Q ss_pred ccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
.....|+..|+|||++.++ .++.++||||+|+++|||++|+.||........... ...........
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~--------~~~~~~~~~~~ 218 (278)
T cd05606 152 -----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--------DRMTLTMAVEL 218 (278)
T ss_pred -----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH--------HHHhhccCCCC
Confidence 1223589999999999754 688999999999999999999999975422111000 00011111233
Q ss_pred ChHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRP-----SMSDVVR 894 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 894 (958)
+...+..+.+++.+|+..+|.+|| ++.++++
T Consensus 219 ~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 445578899999999999999999 9999885
No 353
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.1e-33 Score=303.56 Aligned_cols=251 Identities=24% Similarity=0.309 Sum_probs=197.2
Q ss_pred CCCCCceeeeeCCeEEEEEEE----CCCcEEEEEEeccCCh----hcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeE
Q 002158 626 YFSSSTQVGQGGYGKVYKGIL----SDNTTVAIKRAEEGSL----QGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 696 (958)
+|+..+.||+|+||.||+|.. .+|+.||+|++..... ...+++.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 366778999999999999986 3688999999875322 2345688999999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 99999999999999997543 4888999999999999999999999 999999999999999999999999998754
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccC--CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
..... .......|+..|+|||.+... .++.++||||||+++|||++|..||............. .
T Consensus 156 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~-------~ 222 (290)
T cd05613 156 HEDEV------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEIS-------R 222 (290)
T ss_pred ccccc------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHH-------H
Confidence 32111 111234588999999998753 46789999999999999999999996322110000000 0
Q ss_pred hhcccCCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002158 855 IIDNRMGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVR 894 (958)
Q Consensus 855 ~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 894 (958)
.+.......+..++..+.+++.+||+.||++|| +.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 223 RILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 111111223455677889999999999999997 6666665
No 354
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=7.4e-33 Score=311.11 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=195.9
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------C
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------G 694 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 694 (958)
..+|...+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 367888899999999999999975 68999999986532 22235688999999999999999999998654 2
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..++||||+. .+|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 4699999995 47877763 23889999999999999999999999 9999999999999999999999999987
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV- 852 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~- 852 (958)
.... ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||................+..
T Consensus 166 ~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 166 HADA----------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred CCCC----------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 5321 1122357888999999876 468889999999999999999999997644322211111100000
Q ss_pred ------------hhhhcccCCCC--------ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHh
Q 002158 853 ------------FSIIDNRMGSY--------PSECVERFVTLALRCCHDKPEHRPSMSDVVRE--LENI 899 (958)
Q Consensus 853 ------------~~~i~~~~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 899 (958)
..... ..... ....+..+.+++.+||+.||++||++++++++ ++..
T Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 236 PEFVQKLEDKAAKSYIK-SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHHHHhcccchHHHHh-hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00000 00000 11234668899999999999999999999975 4443
No 355
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-33 Score=309.85 Aligned_cols=248 Identities=26% Similarity=0.398 Sum_probs=206.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
...|.+...||+|.|++|..|++. .+..||||.+++.. ......+.+|+++|+.++|||||+++.+...+..+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 346778889999999999999976 69999999998753 333455889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+.+|.+++|+...++ ..+..+..++.|+.+|++|||+++ |||||||++|||++.+.++||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-- 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY-- 207 (596)
T ss_pred EeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc--
Confidence 99999999999986654 566888999999999999999999 99999999999999999999999999987743
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCC-CcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......+|++.|.|||++.+.+|+ +++|+||+|+++|-|+.|..||++.. +...- ...+...
T Consensus 208 ------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~-lk~Lr---------~rvl~gk 271 (596)
T KOG0586|consen 208 ------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN-LKELR---------PRVLRGK 271 (596)
T ss_pred ------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc-ccccc---------chheeee
Confidence 3344567899999999999998875 59999999999999999999997432 11100 0001111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...|--...+..+++.+++-.+|.+|++++++.++
T Consensus 272 -~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 272 -YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred -ecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 11233445667889999999999999999998864
No 356
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.3e-33 Score=329.87 Aligned_cols=259 Identities=26% Similarity=0.359 Sum_probs=193.9
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEe--------
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE-------- 692 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------- 692 (958)
...+|++.+.||+||||.||+++.+ ||+.||||++.... ........+|+.++++++|||||+++..+.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 4456777789999999999999988 99999999987653 3334568899999999999999999621100
Q ss_pred --------------------------------------------------------------------------------
Q 002158 693 -------------------------------------------------------------------------------- 692 (958)
Q Consensus 693 -------------------------------------------------------------------------------- 692 (958)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred -----------------------C--------CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh
Q 002158 693 -----------------------E--------GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT 741 (958)
Q Consensus 693 -----------------------~--------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~ 741 (958)
+ ...|+-||||+..+++++++++... -.....++++.+|++||+|+|+
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHHh
Confidence 0 1258899999998888888765421 1467789999999999999999
Q ss_pred cCCCCeeccCCCccceEecCCCCeEEeeeeeecccc----c-------CCCCCCccceeeeeccCCCCccChhhhccCC-
Q 002158 742 EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP----V-------LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK- 809 (958)
Q Consensus 742 ~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~----~-------~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~- 809 (958)
.| ||||||||.||++|+++.|||+|||+|+... . ............+...||.-|+|||++.+..
T Consensus 716 ~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 QG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred Cc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 99 9999999999999999999999999998721 0 0111111122345678999999999997654
Q ss_pred --CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCC
Q 002158 810 --LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRP 887 (958)
Q Consensus 810 --~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 887 (958)
|+.|+|+||+||+++||+- ||.....-...+...++ +.+... ..+.......=..+|.++++.||.+||
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~-g~iP~~-----~~f~~~~~~~e~slI~~Ll~hdP~kRP 863 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRK-GSIPEP-----ADFFDPEHPEEASLIRWLLSHDPSKRP 863 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhccc-CCCCCC-----cccccccchHHHHHHHHHhcCCCccCC
Confidence 9999999999999999985 67654443333332221 111110 112222333447899999999999999
Q ss_pred CHHHHHH
Q 002158 888 SMSDVVR 894 (958)
Q Consensus 888 s~~evl~ 894 (958)
|+.|++.
T Consensus 864 tA~eLL~ 870 (1351)
T KOG1035|consen 864 TATELLN 870 (1351)
T ss_pred CHHHHhh
Confidence 9999985
No 357
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-35 Score=289.57 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=197.6
Q ss_pred ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 631 TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
..||.|+||+|+|-.++ .|+..|||+++... ..+++++..|.+...+- +.||||+++|.+-.++..|+.||+| ..+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~S 148 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DIS 148 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hhh
Confidence 46999999999999986 69999999998754 36678899999865555 7999999999999999999999999 467
Q ss_pred HHHHh---ccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 708 LRDWL---SGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 708 L~~~l---~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
|+.+. ....+..+++...-+|.....+||.||-+.-+ ||||||||+|||+|..|.+||||||++-.+..
T Consensus 149 lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~------ 220 (361)
T KOG1006|consen 149 LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLVD------ 220 (361)
T ss_pred HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHHH------
Confidence 75544 33344558888889999999999999987754 99999999999999999999999999865421
Q ss_pred ccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
+...+.-+|-..|||||.+.. ..|+-++||||+|++|||+.||..|+....+..+++......... ...
T Consensus 221 --SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp-------~l~ 291 (361)
T KOG1006|consen 221 --SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPP-------ILL 291 (361)
T ss_pred --HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCC-------eec
Confidence 112233457888999999964 348889999999999999999999998766665555443332211 111
Q ss_pred CC---hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 863 YP---SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 863 ~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+ .+....+..++..|+.+|-.+||++.++.++
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 12 2366789999999999999999999998764
No 358
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.5e-33 Score=303.63 Aligned_cols=257 Identities=25% Similarity=0.355 Sum_probs=197.4
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEEec
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
|...+.||+|++|+||+|+.. +++.||||++..... .......+|+..+++++ |+|++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 556788999999999999986 578999999875432 22334567999999999 999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
+|+|.+++.......+++.++..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 889999997665456899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc----------
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV---------- 852 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~---------- 852 (958)
......|+..|+|||++.. ..++.++|+||||+++|||++|+.||................+..
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 154 -----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred -----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence 1122457889999998854 457889999999999999999999986543222111110000000
Q ss_pred -hhhhccc--------CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 -FSIIDNR--------MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 -~~~i~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+... ........+..+.+++.+||+.+|++||+++|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000000 000011124678999999999999999999999863
No 359
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.6e-32 Score=308.76 Aligned_cols=262 Identities=22% Similarity=0.318 Sum_probs=201.0
Q ss_pred hHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC
Q 002158 617 FKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE 693 (958)
Q Consensus 617 ~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 693 (958)
.+++...+++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|+||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 4566778899999999999999999999864 68899999987532 22345688999999999999999999988643
Q ss_pred ------CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEE
Q 002158 694 ------GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKV 767 (958)
Q Consensus 694 ------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl 767 (958)
...++++|++ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEE
Confidence 3468888887 78999988643 3899999999999999999999999 999999999999999999999
Q ss_pred eeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002158 768 ADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA 846 (958)
Q Consensus 768 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~ 846 (958)
+|||+++.... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.............
T Consensus 162 ~dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~ 231 (345)
T cd07877 162 LDFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 231 (345)
T ss_pred ecccccccccc----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999875321 1123457889999999876 467889999999999999999999996543322111110
Q ss_pred hhcCcc-hhh------------hc--ccCCC-----CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 847 RDSGMV-FSI------------ID--NRMGS-----YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 847 ~~~~~~-~~~------------i~--~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+.. ... +. ...+. .....+..+.+++.+|++.||.+||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 232 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000 000 00 00000 011235678899999999999999999999975
No 360
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.2e-32 Score=308.63 Aligned_cols=261 Identities=23% Similarity=0.281 Sum_probs=195.7
Q ss_pred CCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc--------------HHHHHHHHHHHHccCCCCcceEEEEEEeC
Q 002158 629 SSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG--------------QNEFLTEIKLLSRLHHRNLVSLLGYCDEE 693 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 693 (958)
..+.||+|+||+||+|.+. +++.||||++....... ...+.+|++++++++|+||+++++++..+
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 3467999999999999976 68999999886532211 12477899999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
+..++||||++ |+|.+++.... .+++.....++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCccce
Confidence 99999999996 69999996543 4889999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCC------C-ccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002158 774 RLAPVLDDEG------T-MPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNV 845 (958)
Q Consensus 774 ~~~~~~~~~~------~-~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~ 845 (958)
+......... . ..........++..|+|||++.+. .++.++||||||+++|||++|+.||............
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i 246 (335)
T PTZ00024 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRI 246 (335)
T ss_pred eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 7653111000 0 001111223468899999998764 4688999999999999999999999765543222111
Q ss_pred HhhcCcch-----hhh------------cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 846 ARDSGMVF-----SII------------DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 846 ~~~~~~~~-----~~i------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+... ... ...........+..+.+++.+|++.+|++||+++|++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 247 FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 11000000 000 000001112345678899999999999999999999963
No 361
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.1e-33 Score=326.49 Aligned_cols=263 Identities=19% Similarity=0.258 Sum_probs=189.3
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEECC--CcEEEEE------------------EeccCChhcHHHHHHHHHHHHccCCC
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILSD--NTTVAIK------------------RAEEGSLQGQNEFLTEIKLLSRLHHR 681 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~H~ 681 (958)
....+|.+.+.||+|+||+||++.++. +..+++| .+.. .......+.+|++++++++|+
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCC
Confidence 345789999999999999999987642 2222222 1111 112334688999999999999
Q ss_pred CcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCC---CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceE
Q 002158 682 NLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRT---KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNIL 758 (958)
Q Consensus 682 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NIL 758 (958)
||+++++++...+..++|+|++ +++|.+++.... .......++..++.|++.||+|||+++ |+||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEE
Confidence 9999999999999999999999 568888775432 122345667889999999999999999 999999999999
Q ss_pred ecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCC-CCCCc
Q 002158 759 LDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQP-ISHGK 837 (958)
Q Consensus 759 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P-~~~~~ 837 (958)
++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..+ +....
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~ 373 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKERE------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG 373 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccc------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC
Confidence 99999999999999986532111 112235699999999999999999999999999999999998764 43221
Q ss_pred --hhHHHHHHHhhcC-----------cchhhhcccC-C----CCC-----hHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 838 --NIVREVNVARDSG-----------MVFSIIDNRM-G----SYP-----SECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 838 --~~~~~~~~~~~~~-----------~~~~~i~~~~-~----~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
............. ..++.++... . ..+ ...+..+.+++.+|++.||.+||++.|+++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 374 GKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred CCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111111111000 0011111000 0 000 012346778899999999999999999997
Q ss_pred H
Q 002158 895 E 895 (958)
Q Consensus 895 ~ 895 (958)
+
T Consensus 454 h 454 (501)
T PHA03210 454 L 454 (501)
T ss_pred C
Confidence 4
No 362
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.7e-33 Score=304.26 Aligned_cols=254 Identities=22% Similarity=0.354 Sum_probs=205.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV 699 (958)
++|...+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36778889999999999999976 6899999998653 2233467889999999998 99999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999997553 4999999999999999999999999 999999999999999999999999998765332
Q ss_pred CCCCC-------------ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002158 780 DDEGT-------------MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA 846 (958)
Q Consensus 780 ~~~~~-------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~ 846 (958)
..... ..........|+..|+|||......++.++||||||++++|+++|+.||........ ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~ 234 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT-FQKI 234 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-HHHH
Confidence 21100 001122345688999999999888899999999999999999999999975442111 1111
Q ss_pred hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCH----HHHHH
Q 002158 847 RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSM----SDVVR 894 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 894 (958)
. ......+...+..+.+++.+||+.+|.+||++ +++++
T Consensus 235 ~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 235 L----------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred H----------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 1 11123345567889999999999999999999 77665
No 363
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1e-32 Score=305.84 Aligned_cols=267 Identities=26% Similarity=0.323 Sum_probs=197.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--cHHHHHHHHHHHHccCCCCcceEEEEEEeC-------
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------- 693 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------- 693 (958)
.++|...+.||+|+||.||+|.++ +++.||||++...... ....+.+|++++++++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 457888899999999999999976 6899999988654322 234577899999999999999999987543
Q ss_pred -CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 694 -GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 694 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
...++||||++ +++...+.... ..+++.++..++.|+++||+|||+.+ |+||||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCcc
Confidence 34699999995 57877776432 35999999999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCc----cceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 773 SRLAPVLDDEGTM----PTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 773 a~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
++........... .........|++.|+|||.+.+. .++.++||||||+++|||++|+.||.+............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9865332211110 11122345678899999988654 578899999999999999999999975443221111110
Q ss_pred hcCcc-----------hhhhc-ccCCCCC-------hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 848 DSGMV-----------FSIID-NRMGSYP-------SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 848 ~~~~~-----------~~~i~-~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+.. ....+ ......+ ......+.+++.+|++.||++||++.|++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00000 00000 0000011 1223568899999999999999999998863
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.3e-32 Score=309.07 Aligned_cols=257 Identities=22% Similarity=0.322 Sum_probs=198.2
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC----
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG---- 694 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 694 (958)
...++|+..+.||+|+||.||+|... ++..||||++.... ......+.+|++++++++|+||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 34667888999999999999999965 78999999986432 223456889999999999999999999986543
Q ss_pred --eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 695 --EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 695 --~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeccc
Confidence 458999999 78999988643 4889999999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM 851 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~ 851 (958)
+..... ......+++.|+|||++.+ ..++.++||||+|+++|++++|..||..................
T Consensus 165 ~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07880 165 ARQTDS----------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGT 234 (343)
T ss_pred cccccc----------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 875421 1123457889999999876 45788999999999999999999999765432221111110000
Q ss_pred c-------------hhhhcc-------cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 V-------------FSIIDN-------RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ~-------------~~~i~~-------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ...+.. .........+..+.+++.+|++.||++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 235 PSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred CCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000000 0001112345568899999999999999999999964
No 365
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-32 Score=309.29 Aligned_cols=258 Identities=24% Similarity=0.346 Sum_probs=197.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC-----CeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE-----GEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 696 (958)
.+|...+.||+|+||+||+|... +++.||||.+... ......++.+|+.+++.++|+||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 46788899999999999999975 6899999998653 223345678899999999999999999988654 357
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+. ++|.+++.... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 99999995 79999986543 4899999999999999999999999 999999999999999999999999999765
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh--h-----
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR--D----- 848 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~--~----- 848 (958)
.... .......|+..|+|||.+.. ..++.++|||||||++|||++|+.||.............. .
T Consensus 159 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 159 SEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE 231 (337)
T ss_pred CCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 3211 11123457889999999865 4688899999999999999999999965432111100000 0
Q ss_pred ------cCcchhhhc-------ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 849 ------SGMVFSIID-------NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 849 ------~~~~~~~i~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......+. .........++..+.+++.+||+.+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000000 00001122456778999999999999999999999986
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1e-32 Score=308.78 Aligned_cols=260 Identities=26% Similarity=0.349 Sum_probs=202.6
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC-----eEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG-----EQM 697 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 697 (958)
+|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4777889999999999999976 58999999987643 334567899999999999999999999987765 789
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||++ ++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 58999997544 5999999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc-----
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM----- 851 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~----- 851 (958)
..... ........++..|+|||++.+. .++.++||||||+++|+|++|+.||................+.
T Consensus 155 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 155 PDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred ccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 32211 0112234578899999999888 7899999999999999999999999754432211111110000
Q ss_pred --------chhhhccc-------CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 --------VFSIIDNR-------MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 --------~~~~i~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+... ........+..+.+++.+||+.+|++||++++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00000000 001122356778999999999999999999999975
No 367
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.3e-32 Score=307.00 Aligned_cols=259 Identities=24% Similarity=0.329 Sum_probs=199.1
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe-CCe
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE-EGE 695 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 695 (958)
+...+++|+..+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3446788999999999999999999976 7899999987643 22334568899999999999999999999865 567
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||||+ +++|.++++.. .+++..+..++.|+++||+|||+.+ |+||||||+||++++++.++|+|||++..
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence 89999999 57999988643 3788888899999999999999999 99999999999999999999999999874
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc-----
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS----- 849 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~----- 849 (958)
... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||................
T Consensus 158 ~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 158 QDP----------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred cCC----------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 321 1122357888999998866 568899999999999999999999996544321111000000
Q ss_pred --------Ccchhhhccc--CCCCC-----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 850 --------GMVFSIIDNR--MGSYP-----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 850 --------~~~~~~i~~~--~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+.+... ....+ ...+..+.+++.+|++.+|++||++++++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000 00111 1245789999999999999999999999865
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=9.6e-33 Score=310.20 Aligned_cols=260 Identities=20% Similarity=0.311 Sum_probs=196.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC----------
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE---------- 693 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---------- 693 (958)
.+|...+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 56888899999999999999975 6889999998776555667789999999999999999999876543
Q ss_pred ----CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEe
Q 002158 694 ----GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVA 768 (958)
Q Consensus 694 ----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~ 768 (958)
...++||||++ ++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+|++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEEC
Confidence 35789999996 6999888643 3889999999999999999999999 999999999999974 5678999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
|||+++........ ........|+..|+|||.+.. ..++.++|||||||++|||++|+.||..............
T Consensus 158 dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 158 DFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred CcccceecCCcccc----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99998754321111 111122357889999998754 4578899999999999999999999976543322211111
Q ss_pred hcCc--------ch----hhhc--ccCC-----CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 848 DSGM--------VF----SIID--NRMG-----SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 848 ~~~~--------~~----~~i~--~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.... .. .... .... ........++.+++.+||+.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 00 0000 0000 0112345678899999999999999999999964
No 369
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.8e-32 Score=295.60 Aligned_cols=249 Identities=25% Similarity=0.354 Sum_probs=198.6
Q ss_pred CCCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccC-----ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEG-----SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+|...+.||+|+||.||++.+.. +..+++|.++.. ......++..|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 46778899999999999998753 455666665432 122334577899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 700 YEFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
|||+++++|.+++... ....+++.++..++.|+++||+|||+.+ ++|+||||+||+++. +.++|+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999998642 2345899999999999999999999999 999999999999975 569999999987653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... .......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...... ..... ...
T Consensus 157 ~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~-~~~~~---------~~~ 219 (260)
T cd08222 157 GSC-------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL-SVVLR---------IVE 219 (260)
T ss_pred CCc-------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-HHHHH---------HHc
Confidence 211 1122345888999999998888899999999999999999999999644322 11111 111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+..++.++.+++.+||+.+|++||++.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 220 GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 22233456677899999999999999999999999874
No 370
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2e-33 Score=283.33 Aligned_cols=205 Identities=28% Similarity=0.384 Sum_probs=169.3
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECC-----CcEEEEEEeccCChhc--HHHHHHHHHHHHccCCCCcceEEEEEEe-CC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSD-----NTTVAIKRAEEGSLQG--QNEFLTEIKLLSRLHHRNLVSLLGYCDE-EG 694 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~ 694 (958)
....|+....||+|+||.||+|..++ ...+|+|+++...... .....+|+..++.++|||++.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 34568888999999999999997432 3379999998753221 2356799999999999999999999876 78
Q ss_pred eEEEEEEecCCCCHHHHhccCC---CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC----CCeEE
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRT---KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN----LNAKV 767 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~----~~~kl 767 (958)
..++++||.+. +|.+.|+-.+ ...++...+..|..||+.|+.|||++- |+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEe
Confidence 89999999965 8988886322 345889999999999999999999999 9999999999999877 89999
Q ss_pred eeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCC
Q 002158 768 ADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISH 835 (958)
Q Consensus 768 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~ 835 (958)
+|||++|.+...- .+......++-|..|.|||.+.+. .|+.+.||||.||++.||+|-++-|..
T Consensus 178 aDlGlaR~~~~pl----kpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPL----KPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccc----cccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999999874321 122233456778999999999886 588899999999999999998777754
No 371
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.2e-32 Score=303.82 Aligned_cols=261 Identities=25% Similarity=0.293 Sum_probs=194.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-C--CcEEEEEEeccCC--hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC----Ce
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-D--NTTVAIKRAEEGS--LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE----GE 695 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~----~~ 695 (958)
+|...+.||+|+||.||++... . +..||+|++.... ....+.+.+|+++++++ +|+||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4667789999999999999975 3 7799999886532 22345688999999999 599999999975432 45
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.+++|||++ ++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 789999985 69999996543 4899999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc---
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM--- 851 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~--- 851 (958)
....... .........||..|+|||++.+ ..++.++||||+|+++|+|++|+.||................+.
T Consensus 155 ~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 155 FSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 5332211 1111223568999999998866 46889999999999999999999999754422111100000000
Q ss_pred ----------chhhhc---c----cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 ----------VFSIID---N----RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ----------~~~~i~---~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... . .........+..+.+++.+|++.||++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000 0 0000111235678999999999999999999999864
No 372
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.9e-32 Score=296.64 Aligned_cols=257 Identities=25% Similarity=0.358 Sum_probs=199.2
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+..|++++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455678999999999999986 58999999987653 233456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
+ ++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 7 59999997653 34899999999999999999999999 99999999999999999999999999876532111
Q ss_pred CccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC----cchhh---
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG----MVFSI--- 855 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~----~~~~~--- 855 (958)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||................+ .....
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 -----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred -----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence 11223457789999999776 788999999999999999999999965443221111110000 00000
Q ss_pred ---hcccCC--------CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 ---IDNRMG--------SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 ---i~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+.... ...+..+..+.+++.+||+.+|++||++.+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 000000 0011235689999999999999999999999863
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.4e-32 Score=307.11 Aligned_cols=256 Identities=23% Similarity=0.338 Sum_probs=197.8
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe----
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE---- 695 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 695 (958)
..++|+..+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.++++++|+|++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567888899999999999999986 5889999998653 22334567889999999999999999998866554
Q ss_pred --EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 696 --QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 696 --~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
.++|+||+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 67999999753 4899999999999999999999999 999999999999999999999999998
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
...... .....++..|+|||.+.+. .++.++||||||+++|||++|+.||................+..
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~ 235 (343)
T cd07851 166 RHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTP 235 (343)
T ss_pred cccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Confidence 754211 1233578889999998653 67889999999999999999999997554322111111100000
Q ss_pred h-hh------------hcccC----C---CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 F-SI------------IDNRM----G---SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~-~~------------i~~~~----~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. +. +.... . ......+..+.+++.+|++.+|++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 236 DEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0 00 00000 0 0011235778999999999999999999999864
No 374
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=4.5e-32 Score=290.57 Aligned_cols=236 Identities=28% Similarity=0.354 Sum_probs=195.5
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccCChh---cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ---GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
||+|+||.||++... +++.||+|.+...... ....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999986 5899999998764332 345789999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccce
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTH 788 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 788 (958)
.+++.... .+++..+..++.|+++|+.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-------~ 148 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-------S 148 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC-------C
Confidence 99997553 4899999999999999999999988 9999999999999999999999999987653221 1
Q ss_pred eeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 789 VSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 789 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
......|+..|+|||...+...+.++|+||||+++|||++|..||..... ......... .....+...+
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~~----------~~~~~~~~~~ 217 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-KEIYEKILK----------DPLRFPEFLS 217 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHhc----------CCCCCCCCCC
Confidence 12334588899999999888889999999999999999999999965443 111111111 1123344557
Q ss_pred HHHHHHHHHccccCCCCCCCHHH
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSD 891 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~e 891 (958)
..+.+++.+||..||++||++++
T Consensus 218 ~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 218 PEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHHHhcCCHhhCCCccc
Confidence 88899999999999999999944
No 375
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=4.3e-33 Score=297.35 Aligned_cols=245 Identities=24% Similarity=0.372 Sum_probs=204.6
Q ss_pred CceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 630 STQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
.+.||+|-||+||-|+++ +|+.||||++.+. .......+.+|+.+|++++||.||.+.--|+..+..++|||.+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 478999999999999975 7999999998764 2334467889999999999999999999999999999999999 56
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC---CCeEEeeeeeecccccCCCCC
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN---LNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~---~~~kl~DFGla~~~~~~~~~~ 783 (958)
+..++|-...++++++.....++.||+.||.|||.++ |+|+||||+|||+... -.+||||||+||+...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE----- 719 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE----- 719 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecch-----
Confidence 7777766566667999999999999999999999999 9999999999999653 4699999999998642
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
......++||+.|+|||+++...|...-|+||.||++|--++|..||..++++...++.+.- ++ .+..
T Consensus 720 ---ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF---My------Pp~P 787 (888)
T KOG4236|consen 720 ---KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF---MY------PPNP 787 (888)
T ss_pred ---hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc---cc------CCCc
Confidence 22345678999999999999999999999999999999999999999888776665432211 00 0122
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+......++|...++..-++|-+.+..+.+
T Consensus 788 W~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 788 WSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 34667788999999999999999998876643
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=1.5e-31 Score=323.72 Aligned_cols=146 Identities=24% Similarity=0.376 Sum_probs=131.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|.+.+.||+|+||+||+|.+. +++.||||+++... ......+.+|+.+++.++|+||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 46778899999999999999986 68999999987542 223457889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
||+++++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999997543 4788999999999999999999998 99999999999999999999999999863
No 377
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.2e-32 Score=308.20 Aligned_cols=260 Identities=27% Similarity=0.435 Sum_probs=215.7
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEe
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDE 692 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 692 (958)
+.++.+...++.|++.+.||+|.+|.||+++.. +++.+|||+..... ...++...|.++++.. +|||++.++|++.-
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 445555667778899999999999999999964 78899999887643 3345677899999988 69999999999843
Q ss_pred -----CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEE
Q 002158 693 -----EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKV 767 (958)
Q Consensus 693 -----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl 767 (958)
++++|||||||.+|+..|+++...+..+.|+.+..|+..++.|+++||... ++|||||-.|||++.++.||+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEE
Confidence 578999999999999999998777778999999999999999999999998 999999999999999999999
Q ss_pred eeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-----CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHH
Q 002158 768 ADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVRE 842 (958)
Q Consensus 768 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~ 842 (958)
+|||.+..++.. ........||+.|||||++... .|+.++|+||+|++..||.-|.+|+.+......
T Consensus 165 vDFGvSaQldsT-------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra- 236 (953)
T KOG0587|consen 165 VDFGVSAQLDST-------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA- 236 (953)
T ss_pred eeeeeeeeeecc-------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-
Confidence 999998755321 2233456799999999999643 467799999999999999999999986554322
Q ss_pred HHHHhhcCcchhhhcccCC--CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 843 VNVARDSGMVFSIIDNRMG--SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 843 ~~~~~~~~~~~~~i~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
++.+..+..+ ..|..+.+++.++|..|+.+|..+||++.+++++
T Consensus 237 ---------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 237 ---------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ---------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 2333332222 2367889999999999999999999999998854
No 378
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-32 Score=317.89 Aligned_cols=259 Identities=25% Similarity=0.303 Sum_probs=211.7
Q ss_pred ChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEE
Q 002158 616 KFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCD 691 (958)
Q Consensus 616 ~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 691 (958)
..+++....++|.+.++||+|+||.|..++.+ .++.||+|++.++. ..+..-|..|-++|...+.+-|+.++-.|.
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 35677888889999999999999999999986 68899999998742 233446889999999999999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeee
Q 002158 692 EEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFG 771 (958)
Q Consensus 692 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 771 (958)
++.++|+|||||+||+|-.++.... .+++..+..++..|.-||.-+|+.| +|||||||+|||+|.+|++||+|||
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccch
Confidence 9999999999999999999997665 5899999999999999999999999 9999999999999999999999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhcc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA 846 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~ 846 (958)
.+-.+...+ .-.+...+|||.|++||++.. +.|.+.+|.||+||++|||+.|.-||.. +.+...+...
T Consensus 221 sClkm~~dG------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa-dslveTY~KI 293 (1317)
T KOG0612|consen 221 SCLKMDADG------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA-DSLVETYGKI 293 (1317)
T ss_pred hHHhcCCCC------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH-HHHHHHHHHH
Confidence 987653322 233456789999999999953 5688999999999999999999999963 3333333222
Q ss_pred hhcCcchhhhcccCCCCC--hHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 002158 847 RDSGMVFSIIDNRMGSYP--SECVERFVTLALRCCHDKPEHRPS---MSDVVRE 895 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 895 (958)
.... ..-.+| .+.+.+..+||.+.+ -+|+.|.. ++++-.|
T Consensus 294 m~hk--------~~l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 294 MNHK--------ESLSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hchh--------hhcCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence 1111 112334 457788888988766 56888877 8887765
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-32 Score=251.87 Aligned_cols=257 Identities=25% Similarity=0.404 Sum_probs=195.3
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
|...++||+|.||+||+|+.. .++.||+|+++-... .--....+|+-+++.++|.|||+++++...+...-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 344568999999999999954 688999998865422 22346789999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
..+|..+.....+ .++.+.+..++.|+.+||.++|++. +.|||+||.|.||+.+|+.|++|||+++.+..
T Consensus 84 -dqdlkkyfdslng-~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgi----- 153 (292)
T KOG0662|consen 84 -DQDLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI----- 153 (292)
T ss_pred -hHHHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCC-----
Confidence 4689999876554 4899999999999999999999999 99999999999999999999999999986532
Q ss_pred CccceeeeeccCCCCccChhhhccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHH-HHHhhcCcchh-------
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREV-NVARDSGMVFS------- 854 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~------- 854 (958)
+.......+-|..|.+|.++.+.+ |++..|+||.||++.|+.....|...+.+...+. +..+.-+...+
T Consensus 154 --pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 154 --PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred --ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccc
Confidence 233334456788999999998875 8889999999999999998555554444433333 22222222111
Q ss_pred -hhcccC-CCCCh---------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 -IIDNRM-GSYPS---------ECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 -~i~~~~-~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..|-.. +.+|. .....=.+++.+.+.-+|.+|.++++.+++
T Consensus 232 ~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 111000 11121 112233578888888899999999888763
No 380
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=286.29 Aligned_cols=241 Identities=24% Similarity=0.370 Sum_probs=201.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc---HHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG---QNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 698 (958)
..+|....+||+|+||+|..|..+ ..+.+|||++++...-+ .+--+.|-++|+-. +-|.+++++.++..-+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 346778899999999999999876 46789999998753322 22234577777766 56889999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+.||+|--.+++-++ +.+..+..+|..||-||-+||++| ||.||||-+|||+|.+|.+||+|||+++.-
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn-- 500 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-- 500 (683)
T ss_pred EEEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc--
Confidence 9999999999988876554 888999999999999999999999 999999999999999999999999999742
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
......+..++||+.|+|||++..++|..++|.|||||+||||+.|+.||++.+.. + +++.|..
T Consensus 501 -----i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~-e----------lF~aI~e 564 (683)
T KOG0696|consen 501 -----IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-E----------LFQAIME 564 (683)
T ss_pred -----ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH-H----------HHHHHHH
Confidence 22234556799999999999999999999999999999999999999999754432 2 2223333
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCC
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRP 887 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP 887 (958)
.--.+|...+.+..++.+..+.+.|.+|.
T Consensus 565 hnvsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 565 HNVSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence 33467888889999999999999999994
No 381
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.3e-31 Score=284.78 Aligned_cols=220 Identities=23% Similarity=0.211 Sum_probs=178.8
Q ss_pred eCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHHHHhcc
Q 002158 636 GGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSG 714 (958)
Q Consensus 636 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 714 (958)
|.+|.||++.+. +++.||+|++.... .+.+|...+....|||++++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999976 68899999987643 233455566666799999999999999999999999999999999965
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeecc
Q 002158 715 RTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVK 794 (958)
Q Consensus 715 ~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 794 (958)
.. .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++|||.+...... .....
T Consensus 79 ~~--~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------~~~~~ 143 (237)
T cd05576 79 FL--NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------CDGEA 143 (237)
T ss_pred hc--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc----------cccCC
Confidence 43 3899999999999999999999998 999999999999999999999999987644211 11234
Q ss_pred CCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHH
Q 002158 795 GTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTL 874 (958)
Q Consensus 795 gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~l 874 (958)
++..|+|||++.+..++.++||||+|+++|||++|+.|+....... .. ......|...+..+.++
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------~~--------~~~~~~~~~~~~~~~~l 208 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------NT--------HTTLNIPEWVSEEARSL 208 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------cc--------ccccCCcccCCHHHHHH
Confidence 5678999999988889999999999999999999998874321100 00 00012344566789999
Q ss_pred HHHccccCCCCCCCHH
Q 002158 875 ALRCCHDKPEHRPSMS 890 (958)
Q Consensus 875 i~~cl~~dP~~RPs~~ 890 (958)
+.+|++.||++||++.
T Consensus 209 i~~~l~~dp~~R~~~~ 224 (237)
T cd05576 209 LQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHccCCHHHhcCCC
Confidence 9999999999999974
No 382
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-32 Score=285.24 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=202.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-Chh------cHHHHHHHHHHHHccCCCCcceEEEEEEe-CC
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQ------GQNEFLTEIKLLSRLHHRNLVSLLGYCDE-EG 694 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~ 694 (958)
.++|-..++||+|||+.||+|.+- ..+.||||+-... +.. ..+...+|.++-+.+.||-||++|+|+.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 345566678999999999999854 6788999975332 111 12456799999999999999999999864 55
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec---CCCCeEEeeee
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD---SNLNAKVADFG 771 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~---~~~~~kl~DFG 771 (958)
.++-|+|||+|.+|+-||+...- +++.++..|+.||+.||.||.+.. +||||-||||.|||+- .-|.+||.|||
T Consensus 542 sFCTVLEYceGNDLDFYLKQhkl--mSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHKL--MSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cceeeeeecCCCchhHHHHhhhh--hhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecc
Confidence 77889999999999999976543 899999999999999999999875 8999999999999994 35789999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhccC----CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
++++++............+....||..|++||.+.-+ +.+.|+||||.||++|..+-|+.||.....-...+..
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe-- 696 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE-- 696 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh--
Confidence 9999876665545555666778999999999998644 4677999999999999999999999765443322211
Q ss_pred hcCcchhhhcccCCCCC--hHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 002158 848 DSGMVFSIIDNRMGSYP--SECVERFVTLALRCCHDKPEHRPSMSDVV 893 (958)
Q Consensus 848 ~~~~~~~~i~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl 893 (958)
..+ +...--.+| +....+..++|.+|++..-++|....++.
T Consensus 697 --NTI---lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 697 --NTI---LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred --hch---hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 111 111111122 23556788999999999999997766554
No 383
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=5.7e-32 Score=271.77 Aligned_cols=250 Identities=24% Similarity=0.339 Sum_probs=198.0
Q ss_pred HHcCCCCC-ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEe----CCe
Q 002158 623 ATAYFSSS-TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDE----EGE 695 (958)
Q Consensus 623 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~ 695 (958)
.+++|.+. ++||-|-.|.|..+..+ .++.+|+|++.+.. ...+|++.--.. .|||||.+++++.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 34445443 57999999999999876 68999999987532 234788765444 79999999999854 456
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEeeeee
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVADFGL 772 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~DFGl 772 (958)
+.+|||.|+||.|...+++++...+++.++-.|..||+.|+.|||+.. |.||||||+|+|... +..+||+|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccccc
Confidence 789999999999999999998889999999999999999999999999 999999999999964 55799999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
|+.... .......+-|+.|.|||++...+|+...|+||+||++|-|++|-+||...... ....+..
T Consensus 211 AK~t~~--------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~------aispgMk 276 (400)
T KOG0604|consen 211 AKETQE--------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL------AISPGMK 276 (400)
T ss_pred ccccCC--------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc------cCChhHH
Confidence 985422 11223345799999999999999999999999999999999999999643211 0011111
Q ss_pred hhhhcccCCCCC----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIIDNRMGSYP----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..|......+| ...++...++|+.++..+|.+|.++.++.++
T Consensus 277 -~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 277 -RRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -hHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 11222223343 3466778999999999999999999999875
No 384
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.3e-30 Score=299.19 Aligned_cols=264 Identities=20% Similarity=0.301 Sum_probs=184.3
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEE-----------------CCCcEEEEEEeccCChhcHHH--------------HHHH
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGIL-----------------SDNTTVAIKRAEEGSLQGQNE--------------FLTE 671 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 671 (958)
..++|.+.++||+|+||+||+|.+ ..++.||||++........++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999974 235689999986543222223 3457
Q ss_pred HHHHHccCCCCc-----ceEEEEEEe--------CCeEEEEEEecCCCCHHHHhccCCC---------------------
Q 002158 672 IKLLSRLHHRNL-----VSLLGYCDE--------EGEQMLVYEFVPNGTLRDWLSGRTK--------------------- 717 (958)
Q Consensus 672 ~~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~~--------------------- 717 (958)
+.++.+++|.++ ++++++|.. ++..+|||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777778876654 678888753 3568999999999999999974311
Q ss_pred -CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCC
Q 002158 718 -ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGT 796 (958)
Q Consensus 718 -~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt 796 (958)
..+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+++....... .......+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~------~~~~~g~~t 373 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN------FNPLYGMLD 373 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc------cCccccCCC
Confidence 12467788999999999999999998 99999999999999999999999999875422111 111122357
Q ss_pred CCccChhhhccCCC----------------------CCcchhhhHHHHHHHHHhCCC-CCCCCchhHHHHHHHhhcCcch
Q 002158 797 PGYLDPEYFLTHKL----------------------TDKSDVYSLGVVLLELLTGMQ-PISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 797 ~~y~aPE~~~~~~~----------------------~~~~DV~S~Gv~l~elltG~~-P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
+.|+|||.+..... ..+.||||+||+++||++|.. |+...................+
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~ 453 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW 453 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH
Confidence 89999999864321 124799999999999999875 6653222111111100000000
Q ss_pred hhhcccCCC--CChHHHHHHHHHHHHccccCC---CCCCCHHHHHHH
Q 002158 854 SIIDNRMGS--YPSECVERFVTLALRCCHDKP---EHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~~~--~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~~ 895 (958)
......... ..........+++.+++..+| .+|+|++|+++|
T Consensus 454 r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 454 RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 011111111 123456778899999999766 789999999975
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=8.6e-32 Score=304.30 Aligned_cols=248 Identities=27% Similarity=0.419 Sum_probs=193.7
Q ss_pred CCCCCceeeeeCCe-EEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYG-KVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
-|...+.+|.|+.| .||+|.. +|+.||||++-... ..-..+|+..|+.- +|||||++++.-.++...|++.|.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 35556778999998 6799998 78899999986432 23456899999998 6999999999999999999999999
Q ss_pred CCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---C--CCeEEeeeeeeccc
Q 002158 704 PNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---N--LNAKVADFGLSRLA 776 (958)
Q Consensus 704 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~--~~~kl~DFGla~~~ 776 (958)
..+|.|++... ..........+.+..|++.||++||+.+ ||||||||.||||+. + .+++|+|||+++.+
T Consensus 586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 57999999863 1111222445788999999999999998 999999999999975 3 47999999999987
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhC-CCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTG-MQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
...... ........||-||+|||++....-+.++||||+||++|+.++| .+||.+ ...+.............+
T Consensus 662 ~~~~sS----~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd--~~~R~~NIl~~~~~L~~L 735 (903)
T KOG1027|consen 662 AGGKSS----FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD--SLERQANILTGNYTLVHL 735 (903)
T ss_pred CCCcch----hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc--hHHhhhhhhcCccceeee
Confidence 543332 2224567799999999999999888999999999999999995 999964 333433333322222111
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ..++ +..+||.+|++++|..||++.+|+.+
T Consensus 736 -----~~-~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 736 -----EP-LPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred -----cc-CchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 11 1122 78899999999999999999999954
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=4.2e-30 Score=273.13 Aligned_cols=238 Identities=31% Similarity=0.448 Sum_probs=195.9
Q ss_pred CCeEEEEEEEC-CCcEEEEEEeccCChhc-HHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHHHHhcc
Q 002158 637 GYGKVYKGILS-DNTTVAIKRAEEGSLQG-QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSG 714 (958)
Q Consensus 637 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 714 (958)
+||.||+|.+. +++.||+|++....... .+.+.+|++.+++++|+|++++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999987 48999999998765544 67899999999999999999999999999999999999999999999976
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeecc
Q 002158 715 RTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVK 794 (958)
Q Consensus 715 ~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 794 (958)
... +++..+..++.++++++.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~~--~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~ 147 (244)
T smart00220 81 RGR--LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------LLTTFV 147 (244)
T ss_pred ccC--CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--------cccccc
Confidence 543 889999999999999999999998 9999999999999999999999999998653321 123345
Q ss_pred CCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHH
Q 002158 795 GTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTL 874 (958)
Q Consensus 795 gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~l 874 (958)
++..|++||.+....++.++||||||+++++|++|..||.................... .......+..+.++
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 220 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-------PPPEWKISPEAKDL 220 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-------ccccccCCHHHHHH
Confidence 88899999999988899999999999999999999999975333322222211110000 00011156789999
Q ss_pred HHHccccCCCCCCCHHHHHH
Q 002158 875 ALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 875 i~~cl~~dP~~RPs~~evl~ 894 (958)
+.+|+..+|++||++.++++
T Consensus 221 i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 221 IRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHccCCchhccCHHHHhh
Confidence 99999999999999999986
No 387
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=270.86 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=206.3
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 697 (958)
...+|...++||+|+|++|..++++ ..+.+|+|++++.. .++.+..+.|-.++.+. +||.+|.+..++..+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 4467888999999999999999976 67899999988753 33445577888888877 7999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+|.||++||+|--+++++++ ++++.+..+...|.-||.|||++| ||.||+|-+|||+|..|.+|+.|+|+++.-
T Consensus 328 fvieyv~ggdlmfhmqrqrk--lpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~- 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG- 401 (593)
T ss_pred EEEEEecCcceeeehhhhhc--CcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcC-
Confidence 99999999999877765544 999999999999999999999999 999999999999999999999999999742
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCC--CchhHHHHHHHhhcCcchhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISH--GKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~--~~~~~~~~~~~~~~~~~~~~ 855 (958)
-.+...+..++||+.|+|||++++.+|...+|.|++||+|+||+.|+.||+- .++.. ...+..++++
T Consensus 402 ------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d-----~ntedylfqv 470 (593)
T KOG0695|consen 402 ------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPD-----MNTEDYLFQV 470 (593)
T ss_pred ------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcc-----cchhHHHHHH
Confidence 2223445678999999999999999999999999999999999999999962 11111 1122344555
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCC
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRP 887 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 887 (958)
|-.+.-.+|...+-....+++.-+++||.+|.
T Consensus 471 ilekqiriprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 471 ILEKQIRIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred HhhhcccccceeehhhHHHHHHhhcCCcHHhc
Confidence 55555556777777788899999999999994
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-32 Score=289.14 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=205.7
Q ss_pred CCCCceeeeeCCeEEEEEEECCCc-EEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILSDNT-TVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+.....||-||||.|=.+..+... .+|+|.+++. ....++....|-++|...+.|.||++|..|.+....|++||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 344557999999999998876433 4888887664 344556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
|-||.|+..|++++ .++..++..++..+.+|++|||+++ ||.|||||+|.++|.+|-+||.|||+|+....
T Consensus 502 ClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~---- 572 (732)
T KOG0614|consen 502 CLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS---- 572 (732)
T ss_pred hcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc----
Confidence 99999999997655 4999999999999999999999999 99999999999999999999999999997643
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
...+..++||+.|.|||++.....+.++|.||+|+++|||++|.+||...+.+...-..... ++ .-.
T Consensus 573 ----g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG-------id--~i~ 639 (732)
T KOG0614|consen 573 ----GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG-------ID--KIE 639 (732)
T ss_pred ----CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh-------hh--hhh
Confidence 23355789999999999999999999999999999999999999999876554332211111 00 124
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
+|....+...++|++....+|.+|.- ..+|-+|
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 57788888999999999999999965 4455544
No 389
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-31 Score=291.75 Aligned_cols=240 Identities=22% Similarity=0.280 Sum_probs=193.6
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++.|.....+|.|+|+.|-++... +++..+||++.+... +-.+|+.++... +||||+++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 345556667999999999999865 688999999987522 223677666666 79999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe-cCCCCeEEeeeeeecccccCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL-DSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl-~~~~~~kl~DFGla~~~~~~~ 780 (958)
++.++-+.+.+..... +. .++..|+.+|+.|+.|||++| +||||+||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 9999988877754432 33 778899999999999999999 9999999999999 68999999999999865332
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
...-+=|..|.|||+....+|+.++|+||||++||+|++|+.||.....-.+..... ..
T Consensus 470 ---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i------------~~ 528 (612)
T KOG0603|consen 470 ---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI------------QM 528 (612)
T ss_pred ---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh------------cC
Confidence 112235778999999999999999999999999999999999997543321111110 11
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+.+....++..++|+.+|++.||.+||+|+++..+
T Consensus 529 ~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 529 PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred CccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 22335677889999999999999999999999875
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=3e-30 Score=304.37 Aligned_cols=258 Identities=19% Similarity=0.230 Sum_probs=170.5
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-C----CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEE------EE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-D----NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGY------CD 691 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~------~~ 691 (958)
..++|...+.||+|+||.||+|++. + +..||||++...... +.+..| .++...+.++..++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678899999999999999999986 4 689999988653211 111111 1222222222222211 24
Q ss_pred eCCeEEEEEEecCCCCHHHHhccCCCC------------------CchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCC
Q 002158 692 EEGEQMLVYEFVPNGTLRDWLSGRTKE------------------NLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIK 753 (958)
Q Consensus 692 ~~~~~~lV~E~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dik 753 (958)
.+...++||||+++++|.++++..... ......+..++.|++.||+|||+++ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 566899999999999999998754210 1123445689999999999999998 9999999
Q ss_pred ccceEecC-CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC----------------------CC
Q 002158 754 ASNILLDS-NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH----------------------KL 810 (958)
Q Consensus 754 p~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~ 810 (958)
|+|||+++ ++.+||+|||+|+...... ........||++|+|||.+... .+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999986 5799999999998553221 1122345789999999976432 23
Q ss_pred CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC-CCCChH----------HHHHHHHHHHHcc
Q 002158 811 TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM-GSYPSE----------CVERFVTLALRCC 879 (958)
Q Consensus 811 ~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~----------~~~~l~~li~~cl 879 (958)
+.++|||||||++|||+++..|+.. ............+.......... .....+ ......+|+.+|+
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 4467999999999999997766542 22221111111111110000000 000111 1223458999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 002158 880 HDKPEHRPSMSDVVRE 895 (958)
Q Consensus 880 ~~dP~~RPs~~evl~~ 895 (958)
+.||++|||++|++++
T Consensus 435 ~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 435 RFKGRQRISAKAALAH 450 (566)
T ss_pred cCCcccCCCHHHHhCC
Confidence 9999999999999975
No 391
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5.3e-32 Score=265.36 Aligned_cols=256 Identities=25% Similarity=0.379 Sum_probs=191.6
Q ss_pred CceeeeeCCeEEEEEEEC-CCcEEEEEEecc-C-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--------CCeEEE
Q 002158 630 STQVGQGGYGKVYKGILS-DNTTVAIKRAEE-G-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--------EGEQML 698 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~-~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------~~~~~l 698 (958)
..+||+|.||+||+|+.+ .|+.||+|++-- . ...--....+|+++|..++|+|++.++..|.. ...+|+
T Consensus 22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~yl 101 (376)
T KOG0669|consen 22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYL 101 (376)
T ss_pred HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeee
Confidence 457999999999999976 578899886422 1 22223456799999999999999999988853 235899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||++|+. +|.-+|... ...++..++.++..++..||.|+|... |+|||+||.|+||+.+|.+||+|||+++.+..
T Consensus 102 Vf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 102 VFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred eHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccccceec
Confidence 9999964 888888654 345999999999999999999999999 99999999999999999999999999987754
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc------
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM------ 851 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~------ 851 (958)
..... .+ ..+..+-|..|.+||.+.+. +|+++.|||+.||++.||+||.+-+.+..+..+......-.+.
T Consensus 177 ~~n~~-kp--rytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 177 SKNVV-KP--RYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred ccccC-CC--CcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 33321 11 13445568999999999875 6899999999999999999998887765433222111100010
Q ss_pred -------chhhh-------------cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 -------VFSII-------------DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 -------~~~~i-------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.++.+ .+++..+. -.++..+++.+++..||.+|+++++++.+
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~--kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYV--KDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhccccc--CChhHHHHHHHHhccCcccCcchHhhhch
Confidence 01111 11111000 12366789999999999999999999975
No 392
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-31 Score=274.80 Aligned_cols=265 Identities=21% Similarity=0.285 Sum_probs=205.9
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-C-CC----cceEE
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-H-RN----LVSLL 687 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~n----iv~l~ 687 (958)
+.|+.-...+.+|.+...+|+|.||.|-+..+. .+..||||+++.- ....+...-|+++++++. + |+ +|.+.
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 334444445788999999999999999999875 4789999998753 334456778999999993 2 23 78888
Q ss_pred EEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC------
Q 002158 688 GYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS------ 761 (958)
Q Consensus 688 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~------ 761 (958)
++++..++.++|+|.+ |-|+++++......+++..++..++.|++++++|||+.+ ++|-||||+|||+-+
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEE
Confidence 9999999999999999 679999999888888999999999999999999999999 999999999999932
Q ss_pred --------------CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHH
Q 002158 762 --------------NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELL 827 (958)
Q Consensus 762 --------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ell 827 (958)
+..+||+|||.|+.-.. ....++.|..|.|||++.+-.++..+||||+||+|+|+.
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e----------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHE----------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceecc----------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence 23589999999985421 124567899999999999999999999999999999999
Q ss_pred hCCCCCCCCchhHHH--HHHHhhcCcchhhhccc----------------------------C------CCCChHHHHHH
Q 002158 828 TGMQPISHGKNIVRE--VNVARDSGMVFSIIDNR----------------------------M------GSYPSECVERF 871 (958)
Q Consensus 828 tG~~P~~~~~~~~~~--~~~~~~~~~~~~~i~~~----------------------------~------~~~~~~~~~~l 871 (958)
||..-|..-++.+.. +..... .....++... . -........++
T Consensus 304 tG~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred ccceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 999988654433221 111111 0000000000 0 00122445679
Q ss_pred HHHHHHccccCCCCCCCHHHHHHH
Q 002158 872 VTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 872 ~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+|+.+|+..||.+|+|+.|++.+
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHHccCccccccHHHHhcC
Confidence 999999999999999999999874
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=247.24 Aligned_cols=209 Identities=24% Similarity=0.377 Sum_probs=169.5
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEec
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
......||+|++|.|-+-++. +|...|||++... ..+.+++.++|+++..+- .+|.+|.++|....++..++.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 334457999999999888765 7999999998764 344567788999866554 7999999999999999999999999
Q ss_pred CCCCHHHHhcc--CCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 704 PNGTLRDWLSG--RTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 704 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
.-||+.+.+. ..+..+++...-+|+..+.+||.|||++-+ +||||+||+|||++.+|++|+||||++-.+...
T Consensus 128 -~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS-- 202 (282)
T KOG0984|consen 128 -DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGISGYLVDS-- 202 (282)
T ss_pred -hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccceeehhh--
Confidence 4688776543 234558889999999999999999999864 999999999999999999999999998765321
Q ss_pred CCCccceeeeeccCCCCccChhhhcc----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA 846 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~ 846 (958)
-..+...|-..|||||.+.. ..|+-|+||||+|+++.||.+++.||+......+.+...
T Consensus 203 ------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqv 265 (282)
T KOG0984|consen 203 ------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQV 265 (282)
T ss_pred ------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHH
Confidence 11122457788999999853 368889999999999999999999998766655555443
No 394
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-31 Score=287.75 Aligned_cols=315 Identities=23% Similarity=0.231 Sum_probs=245.4
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCcc-ccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEe
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKE-IGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQ 163 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~-i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 163 (958)
..|++.|+|.+|-++..-.+++..++.|+.|+|+.|.+..+|.. |..-.++++|+|++|+|+..--+.|.+|.+|..|.
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 45899999999999999999999999999999998888888854 66777899999999999977778899999999999
Q ss_pred cccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC
Q 002158 164 VDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA 243 (958)
Q Consensus 164 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 243 (958)
|++|+++...+..|.+|++|+.|+|..|+|.-.--..|.+|++|+.|.|..|+|+....+.|..|.++++|+|..|+++.
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~ 283 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA 283 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh
Confidence 99999997777888889999999999999884435668888888888888888876666777777777777777777752
Q ss_pred CCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCC-----------------------C--CC
Q 002158 244 SEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIP-----------------------S--KK 297 (958)
Q Consensus 244 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~-----------------------~--~~ 297 (958)
.-..++.+++.|+.|+|++|.|..+..+ .+..++|++|+|+.|+|+...+ . +.
T Consensus 284 -vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~ 362 (873)
T KOG4194|consen 284 -VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFV 362 (873)
T ss_pred -hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHH
Confidence 2244566666666666666666655543 5555666666666666653221 1 13
Q ss_pred CCCCcCEEEccCCcCCCcc---chhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--
Q 002158 298 LSENVTTIDLSDNYLNGSI---LESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL-- 372 (958)
Q Consensus 298 ~~~~L~~L~Ls~N~l~~~~---~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~-- 372 (958)
++.+|++|||++|.|+..+ ...|.+|++|+.|.|.+|+|. .||+-.|.. .+.|+.|||.+|-|.+|..+.
T Consensus 363 ~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~krAfsg----l~~LE~LdL~~NaiaSIq~nAFe 437 (873)
T KOG4194|consen 363 GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKRAFSG----LEALEHLDLGDNAIASIQPNAFE 437 (873)
T ss_pred HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchhhhcc----CcccceecCCCCcceeecccccc
Confidence 3467888888888887644 345778888888888888888 677665442 457889999999999997765
Q ss_pred CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCC
Q 002158 373 TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGG 406 (958)
Q Consensus 373 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 406 (958)
.+ +|+.|.+.--.+.|||.+.|..+|......+
T Consensus 438 ~m-~Lk~Lv~nSssflCDCql~Wl~qWl~~~~lq 470 (873)
T KOG4194|consen 438 PM-ELKELVMNSSSFLCDCQLKWLAQWLYRRKLQ 470 (873)
T ss_pred cc-hhhhhhhcccceEEeccHHHHHHHHHhcccc
Confidence 56 9999999999999999999999887765543
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.6e-29 Score=272.74 Aligned_cols=213 Identities=23% Similarity=0.337 Sum_probs=175.7
Q ss_pred HHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh---cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 621 AMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ---GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 621 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
+....-|..++.||-|+||+|.++.-. ....+|.|.+++.+.- .......|-+||.....+-||+||-.|.+++.+
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL 704 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 704 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce
Confidence 344455777889999999999999743 4667899998875433 334577899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
|+||||++||++-.+|-+.+ .+.+.-+..++..++.|+++.|..| +|||||||+|||||.+|.+||.|||++.=+
T Consensus 705 YFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF 779 (1034)
T ss_pred EEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccc
Confidence 99999999999999886543 4888889999999999999999999 999999999999999999999999998543
Q ss_pred ccCCCCCC-----------------------------------ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHH
Q 002158 777 PVLDDEGT-----------------------------------MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 821 (958)
Q Consensus 777 ~~~~~~~~-----------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv 821 (958)
....+... .........+||+.|+|||++....|+..+|.||.||
T Consensus 780 RWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gv 859 (1034)
T KOG0608|consen 780 RWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGV 859 (1034)
T ss_pred eeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhH
Confidence 21111000 0000122347999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCch
Q 002158 822 VLLELLTGMQPISHGKN 838 (958)
Q Consensus 822 ~l~elltG~~P~~~~~~ 838 (958)
+||||+.|+.||.....
T Consensus 860 il~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 860 ILYEMLVGQPPFLADTP 876 (1034)
T ss_pred HHHHHhhCCCCccCCCC
Confidence 99999999999975443
No 396
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-29 Score=251.34 Aligned_cols=257 Identities=25% Similarity=0.364 Sum_probs=194.3
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC-----CeEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE-----GEQML 698 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~l 698 (958)
.+..+.||-|+||.||.+++. +|+.||.|++..- .....+++.+|++++..++|.|++..++..... .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344678999999999999975 7999999998653 334457899999999999999999998876543 25688
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
|+|.| ..+|...|-. ...++...+.-+..||++||+|||+.+ |.||||||.|.|++.+..+||+|||+++..+.
T Consensus 135 ~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence 99999 5688888853 345888899999999999999999999 99999999999999999999999999997543
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHH--------------
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREV-------------- 843 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~-------------- 843 (958)
.+. .+ .+..+-|..|.|||++++. .|+.+.||||.||++.|++.++.-|.....+.+..
T Consensus 209 d~~-----~h-MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaM 282 (449)
T KOG0664|consen 209 RDR-----LN-MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAM 282 (449)
T ss_pred hhh-----hh-hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHH
Confidence 322 11 2233467889999999986 58889999999999999999888886544332221
Q ss_pred HHHhhcCcchhhhcccC--CC--------CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 844 NVARDSGMVFSIIDNRM--GS--------YPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 844 ~~~~~~~~~~~~i~~~~--~~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
+... ++....++.... ++ -+..-..+...+..+++..||++|.+-++.+.++
T Consensus 283 r~AC-EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 283 KYAC-EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HHHh-hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111 111111111111 11 1223345567788889999999999998888754
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=1.9e-28 Score=237.31 Aligned_cols=253 Identities=20% Similarity=0.352 Sum_probs=193.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEE-CCCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeC--CeEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGIL-SDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEE--GEQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~~~lV 699 (958)
.++|++.+++|+|.+++||.|.. .+++.++||+++.- ..+.+.+|+.+|+.+. ||||+++++...+. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 35677788999999999999984 57889999999753 3456889999999996 99999999998764 467899
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeeeeccccc
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGLSRLAPV 778 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla~~~~~ 778 (958)
+||+.+.+...+.. .++...+..+..+++.||.|+|+.| |+|||+||+|++||.. -.++|+|+|+|.++..
T Consensus 114 FE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 99999888776653 2677788899999999999999999 9999999999999975 4699999999998753
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCch-hHHHHHHHhhcCc--c--
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKN-IVREVNVARDSGM--V-- 852 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~-~~~~~~~~~~~~~--~-- 852 (958)
... ....+.+..|--||.+-. ..|+.+-|+|||||++.+|+..+.||..+.+ ..+.++.+.--+. +
T Consensus 186 ~~e--------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~ 257 (338)
T KOG0668|consen 186 GKE--------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYA 257 (338)
T ss_pred Cce--------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHH
Confidence 221 222345666889999865 4588999999999999999999999976653 3333322221111 0
Q ss_pred -------------hhhhccc----CCCC----C-hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 -------------FSIIDNR----MGSY----P-SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 -------------~~~i~~~----~~~~----~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..++... +..+ . .-..++..+++.+.+..|-.+|+|++|...+
T Consensus 258 Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 258 YLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0111100 0000 0 1124678899999999999999999998864
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=7e-27 Score=242.17 Aligned_cols=210 Identities=38% Similarity=0.634 Sum_probs=183.0
Q ss_pred eeeeCCeEEEEEEECC-CcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHHH
Q 002158 633 VGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLRD 710 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~ 710 (958)
||+|++|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999864 899999999875433 34678999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeeeeecccccCCCCCCcccee
Q 002158 711 WLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFGLSRLAPVLDDEGTMPTHV 789 (958)
Q Consensus 711 ~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~ 789 (958)
++.... ..+++..+..++.+++++++|||+.+ ++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------h
Confidence 997542 34889999999999999999999998 999999999999999 89999999999976533211 1
Q ss_pred eeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHH
Q 002158 790 STIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECV 868 (958)
Q Consensus 790 ~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 868 (958)
.....+...|++||..... .++.+.|+|++|+++++|
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------ 187 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------ 187 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------
Confidence 2234577889999999887 788899999999999998
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 869 ERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 869 ~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+.+++.+|++.+|++||++.+++++
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 456789999999999999999999864
No 399
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=6.3e-29 Score=273.85 Aligned_cols=254 Identities=23% Similarity=0.316 Sum_probs=207.5
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
..++|....++|.|+||.||||++. .++..|||+++-....+..-.+.|+-+++.-+|+||+.++|.+...+..+++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 3456778889999999999999976 689999999987655566667889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
||.+|+|.+..+.. .++++.++..++....+|++|||+.+ -+|||||-.||++++.|.+|++|||.+-.+..
T Consensus 93 ycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqita--- 164 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITA--- 164 (829)
T ss_pred ecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhh---
Confidence 99999999998754 45999999999999999999999999 89999999999999999999999998754311
Q ss_pred CCCccceeeeeccCCCCccChhhh---ccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
.......+.||+.|||||+. +.+.|..++|||+.|++..|+-.-+.|..+-.............-...
T Consensus 165 ----ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp----- 235 (829)
T KOG0576|consen 165 ----TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPP----- 235 (829)
T ss_pred ----hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCC-----
Confidence 12233467899999999987 356789999999999999999998888765444333322221111111
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
...-+..+.+.+.++++.|+..+|++||+++.+++
T Consensus 236 -~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 236 -TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -cccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11123456788999999999999999999997764
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=6.8e-28 Score=245.54 Aligned_cols=254 Identities=24% Similarity=0.305 Sum_probs=196.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC------e
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG------E 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 695 (958)
.+|.....+|.|.- .|..|.+. .+++||+|++... .....++..+|..++..++|+|+++++.++.-.. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 35555677888887 56666654 6899999987654 2334567889999999999999999999986543 5
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.|+||||| ..+|...++. .++-.+...+..|++.|++|||+.+ |+||||||+||++..++.+||.|||+|+.
T Consensus 96 ~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcc
Confidence 79999999 5799998873 2777888999999999999999999 99999999999999999999999999984
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh-
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS- 854 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~- 854 (958)
... ....+....|..|.|||++.+..+...+||||.||++.||++|+.-|.+...+.+|-+.....+..-.
T Consensus 168 e~~--------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 168 EDT--------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred cCc--------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence 321 12334566888999999999999999999999999999999999988866666555443322221100
Q ss_pred --------------------------hh-cccC---CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 --------------------------II-DNRM---GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 --------------------------~i-~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. |... .+.+.-......+++.+|+-.+|++|-+.++++++
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00 0000 00111233457889999999999999999999975
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=7.1e-28 Score=261.27 Aligned_cols=198 Identities=26% Similarity=0.394 Sum_probs=168.6
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc--------HHHHHHHHHHHHccC---CCCcceEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG--------QNEFLTEIKLLSRLH---HRNLVSLLGYC 690 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~---H~niv~l~~~~ 690 (958)
....|...+.+|+|+||.|+.|+++ +...|+||.+.+...-. .-..-.|+++|..++ |+||+|++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3346888899999999999999987 46689999876532111 012457999999997 99999999999
Q ss_pred EeCCeEEEEEEec-CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEee
Q 002158 691 DEEGEQMLVYEFV-PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 691 ~~~~~~~lV~E~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
++++.+||+||-. ++.+|.++|..+. .+++.++..|+.|++.|+++||+.+ |||||||-+||.++.+|.+||+|
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEee
Confidence 9999999999986 4558999997554 4999999999999999999999999 99999999999999999999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCC-cchhhhHHHHHHHHHhCCCCCC
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVLLELLTGMQPIS 834 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DV~S~Gv~l~elltG~~P~~ 834 (958)
||.|.+.. ..+...++||.+|.|||++.+.+|-- .-|||++|++||-++-...||.
T Consensus 714 fgsaa~~k---------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTK---------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhc---------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99987542 22334678999999999999988754 6899999999999999888885
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=5.3e-26 Score=238.88 Aligned_cols=199 Identities=34% Similarity=0.522 Sum_probs=172.7
Q ss_pred CCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 627 FSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566889999999999999875 889999999876544 56788999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++...... +++..+..++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--- 153 (225)
T smart00221 81 GGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--- 153 (225)
T ss_pred CCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc---
Confidence 99999999764432 788999999999999999999998 99999999999999999999999999986643220
Q ss_pred ccceeeeeccCCCCccChhhh-ccCCCCCcchhhhHHHHHHHHHhCCCCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVLLELLTGMQPISH 835 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~S~Gv~l~elltG~~P~~~ 835 (958)
.......++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 154 ---~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ---ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ---ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 012234578889999998 666788899999999999999999999965
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-27 Score=234.31 Aligned_cols=246 Identities=21% Similarity=0.315 Sum_probs=183.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEE-EEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGY-CDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~-~~~~~~~~lV~E 701 (958)
+.|.+.+.+|+|.||.+-.+.++ ..+.+++|.+.... ...++|.+|..---.+ .|.||+.-|++ +...+.++++||
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 46788889999999999999987 57889999987654 3356899999866666 59999988775 677788999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe-cC-CCCeEEeeeeeecccccC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL-DS-NLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl-~~-~~~~kl~DFGla~~~~~~ 779 (958)
|+|.|+|.+-+...+ +.+....+++.|++.|+.|+|++. +||||||.+|||| +. ..++||+|||+.+....
T Consensus 103 ~aP~gdL~snv~~~G---igE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~- 175 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAAG---IGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT- 175 (378)
T ss_pred cCccchhhhhcCccc---ccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCc-
Confidence 999999999886533 778888999999999999999999 9999999999999 33 34799999999875321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccC-----CCCCcchhhhHHHHHHHHHhCCCCCCCCc----hhHHHHHHHhhcC
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVLLELLTGMQPISHGK----NIVREVNVARDSG 850 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DV~S~Gv~l~elltG~~P~~~~~----~~~~~~~~~~~~~ 850 (958)
.-....-+..|.+||..... ...+.+|||.||++++.++||+.||.... ...++..... +
T Consensus 176 ---------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~--r 244 (378)
T KOG1345|consen 176 ---------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLK--R 244 (378)
T ss_pred ---------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhc--c
Confidence 11112245569999987543 35678999999999999999999997422 2222222111 1
Q ss_pred cchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 851 MVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 851 ~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
... ..+..-....+.+.++.++-+..+|++|-...++.+
T Consensus 245 k~~-----~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 245 KNP-----ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred cCc-----cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 111 111111234567788889999999999954444443
No 404
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=3.9e-29 Score=271.73 Aligned_cols=295 Identities=23% Similarity=0.302 Sum_probs=263.2
Q ss_pred eeeEEEEccCCcCC-CCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEec
Q 002158 86 LHVRELQLLSMNLS-GNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQV 164 (958)
Q Consensus 86 ~~v~~L~L~~~~l~-~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 164 (958)
..|+.+|+++|.++ +..|....++++++.|-|.......+|+.++.+.+|++|.+++|++. .+-..++.|+.|+.+++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 36899999999999 57999999999999999999899999999999999999999999999 78888999999999999
Q ss_pred cccccc-ccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC
Q 002158 165 DENNIT-GTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA 243 (958)
Q Consensus 165 ~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 243 (958)
..|++. .-+|..+..|..|..||||+|+++ ..|..+...+++-.|+||+|+|..+....|.+++.|-.|||++|++.
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe- 163 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE- 163 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-
Confidence 999997 458899999999999999999999 88999999999999999999999777777899999999999999994
Q ss_pred CCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCC--CcCCCCCCCCCcCEEEccCCcCCCccchhc
Q 002158 244 SEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLT--GSIPSKKLSENVTTIDLSDNYLNGSILESI 320 (958)
Q Consensus 244 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~--~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 320 (958)
.+|..+..+..|++|.|++|.|....- .+..+++|+.|.+++.+-+ ..+++...+.+|..+|||.|.+. ..|+.+
T Consensus 164 -~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecl 241 (1255)
T KOG0444|consen 164 -MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECL 241 (1255)
T ss_pred -hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHH
Confidence 789999999999999999999986554 4888899999999988643 34555677899999999999998 789999
Q ss_pred cCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC-CCCCcceEEeCCCCCCCCC
Q 002158 321 SNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL-TLPNNVTLRLGGNPICTSA 391 (958)
Q Consensus 321 ~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~-~l~~L~~L~l~~N~l~~~~ 391 (958)
-++++|+.|+||+|+|+ ++-..... ...+++|+||.|+++.+|... .++.|+.|++.+|.+.-..
T Consensus 242 y~l~~LrrLNLS~N~it-eL~~~~~~-----W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeG 307 (1255)
T KOG0444|consen 242 YKLRNLRRLNLSGNKIT-ELNMTEGE-----WENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEG 307 (1255)
T ss_pred hhhhhhheeccCcCcee-eeeccHHH-----HhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccC
Confidence 99999999999999998 44433333 345779999999999999887 9999999999999996544
No 405
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=8.5e-29 Score=269.15 Aligned_cols=296 Identities=28% Similarity=0.367 Sum_probs=191.5
Q ss_pred eEEEEccCCcCCCCccccccCCCCcceeeccC-cc-cCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecc
Q 002158 88 VRELQLLSMNLSGNLAPELGQLSRLQYYFMWN-DL-TGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVD 165 (958)
Q Consensus 88 v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n-~~-~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 165 (958)
+..|.+..|++.. +..++..|+.|+.+.+.. ++ ...||+.|..+..|+.||||+|++. ..|..+..-+++-.|+||
T Consensus 57 LEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS 134 (1255)
T KOG0444|consen 57 LEHLSMAHNQLIS-VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLS 134 (1255)
T ss_pred hhhhhhhhhhhHh-hhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcc
Confidence 3344444444442 233455555555555542 22 3357777777777777777777777 777777777777777777
Q ss_pred cccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCC
Q 002158 166 ENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASE 245 (958)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 245 (958)
+|+|..+...-|.+|+.|-.||||+|++. .+|..+..+..|++|.|++|.+...--..+..+++|+.|.+++.+-+...
T Consensus 135 ~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N 213 (1255)
T KOG0444|consen 135 YNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDN 213 (1255)
T ss_pred cCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhc
Confidence 77777333344567777777777777777 56666777777777777777766444445556666666777666665566
Q ss_pred ccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCC
Q 002158 246 IPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPF 325 (958)
Q Consensus 246 ~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 325 (958)
+|.++..+.+|..++|+.|.|.-.+..+.++++|+.|+||+|+|+..--......+|++|+||+|+++ ..|..++.|++
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~k 292 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTK 292 (1255)
T ss_pred CCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHH
Confidence 67777777777777777777775555567777777777777777633222233356777777777776 56777777777
Q ss_pred CCeEeeecccCCC-ccchhhhcccccC------------------ccccceEeccCCCCCCCccCC-CCCCcceEEeCCC
Q 002158 326 LQTLSLENNFLTG-SIPATIWQNKSFS------------------TKARLKIDLRNNSFSNIVGDL-TLPNNVTLRLGGN 385 (958)
Q Consensus 326 L~~L~L~~N~l~~-~ip~~l~~~~~~~------------------~~~l~~L~Ls~N~l~~l~~~~-~l~~L~~L~l~~N 385 (958)
|+.|++.+|+|+- -||.+|.++..+. ...|+.|.|+.|.+.++|+.. -++.|+.|++..|
T Consensus 293 L~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 293 LTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred HHHHHhccCcccccCCccchhhhhhhHHHHhhccccccCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCC
Confidence 7777777777653 4666665554432 234456666777776666666 5666677777776
Q ss_pred CC
Q 002158 386 PI 387 (958)
Q Consensus 386 ~l 387 (958)
|=
T Consensus 373 pn 374 (1255)
T KOG0444|consen 373 PN 374 (1255)
T ss_pred cC
Confidence 64
No 406
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-25 Score=240.17 Aligned_cols=132 Identities=23% Similarity=0.366 Sum_probs=113.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-----C---CCcceEEEEEEe---
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-----H---RNLVSLLGYCDE--- 692 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~~~~~~--- 692 (958)
.+|...++||.|.|++||++.+. +.+.||+|+.+... ...+..+.||++|++++ | .+||+|++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 57788899999999999999875 67899999998643 33456778999999983 2 469999999975
Q ss_pred -CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec
Q 002158 693 -EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD 760 (958)
Q Consensus 693 -~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~ 760 (958)
+.+++||+|++ |.+|..+|....-..++...+.+|+.|++.||.|||.++. |||-||||+|||+.
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENVLLC 222 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcceeeee
Confidence 44899999999 7899999987776779999999999999999999999875 99999999999993
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.6e-26 Score=227.49 Aligned_cols=256 Identities=21% Similarity=0.381 Sum_probs=203.3
Q ss_pred cccChHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEE
Q 002158 613 KGFKFKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYC 690 (958)
Q Consensus 613 ~~~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 690 (958)
..+++.++...| +|.+...|+.|+|+|+ |..+++|++... .....++|.+|.-.++.+.||||++++|.|
T Consensus 185 ~gid~~~lnl~t-------kl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgac 256 (448)
T KOG0195|consen 185 TGIDVSSLNLIT-------KLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGAC 256 (448)
T ss_pred cCcchhhhhhhh-------hhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhc
Confidence 345555555544 5889999999999995 445667766543 333346799999999999999999999999
Q ss_pred EeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEe--
Q 002158 691 DEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVA-- 768 (958)
Q Consensus 691 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~-- 768 (958)
.......++..||+.|+|+..+++......+..++.+++.++|+|++|||+.. +-|----+.+..|++|++.+++|+
T Consensus 257 nsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarisma 335 (448)
T KOG0195|consen 257 NSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMA 335 (448)
T ss_pred cCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecc
Confidence 99999999999999999999999988777899999999999999999999975 334344689999999999998875
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCC---cchhhhHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTD---KSDVYSLGVVLLELLTGMQPISHGKNIVREVNV 845 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~ 845 (958)
|--++. +.....=.+.||+||.+...+.+. ++|+|||.+++||+.|...||.+-...+.-+..
T Consensus 336 d~kfsf--------------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki 401 (448)
T KOG0195|consen 336 DTKFSF--------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI 401 (448)
T ss_pred cceeee--------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh
Confidence 222211 111222357899999998776543 899999999999999999999876655443332
Q ss_pred HhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 846 ARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 846 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
.. ......+|+.....+.+++.-|++.||.+||.++.|+-.|+++.
T Consensus 402 al---------eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 402 AL---------EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hh---------ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 21 22334568888999999999999999999999999999998864
No 408
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=4.8e-26 Score=243.98 Aligned_cols=259 Identities=21% Similarity=0.231 Sum_probs=196.7
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC------CCCcceEEEEEEeCCe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH------HRNLVSLLGYCDEEGE 695 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~~~~~~~~ 695 (958)
--.+|.+....|+|-|++|.+|.+. .|..||||++.....- .+.=+.|+++|++++ .-|+++++-.|....+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 4567888888999999999999975 5889999999875332 233468999999994 4579999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCC-CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeeee
Q 002158 696 QMLVYEFVPNGTLRDWLSGRT-KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGLS 773 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla 773 (958)
++||+|-+ .-+|.+.|+.-+ ...|....+..++.|+.-||..|-..+ |+|.||||.|||+++. ..+||||||.|
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCccc
Confidence 99999998 579999998644 345888999999999999999999999 9999999999999876 46899999998
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV- 852 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~- 852 (958)
...... ..+..--+..|.|||++.+..|+...|+||.||+|||+.||+.-|.+..+-...-....-.+.+
T Consensus 585 ~~~~en---------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p 655 (752)
T KOG0670|consen 585 SFASEN---------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFP 655 (752)
T ss_pred cccccc---------cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCc
Confidence 764221 1122223456999999999999999999999999999999999887644311110000000000
Q ss_pred ------------------------------------hhhhc------------ccCCCCChHHHHHHHHHHHHccccCCC
Q 002158 853 ------------------------------------FSIID------------NRMGSYPSECVERFVTLALRCCHDKPE 884 (958)
Q Consensus 853 ------------------------------------~~~i~------------~~~~~~~~~~~~~l~~li~~cl~~dP~ 884 (958)
...+. +.++.-.......+.+|+.+|+..||+
T Consensus 656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~ 735 (752)
T KOG0670|consen 656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE 735 (752)
T ss_pred HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence 00000 001111224556788999999999999
Q ss_pred CCCCHHHHHHH
Q 002158 885 HRPSMSDVVRE 895 (958)
Q Consensus 885 ~RPs~~evl~~ 895 (958)
+|.+..+++++
T Consensus 736 KRit~nqAL~H 746 (752)
T KOG0670|consen 736 KRITVNQALKH 746 (752)
T ss_pred hcCCHHHHhcC
Confidence 99999998864
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=2e-25 Score=236.38 Aligned_cols=266 Identities=23% Similarity=0.377 Sum_probs=198.9
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCC
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEG 694 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 694 (958)
.....+.|..+++||+|.|++||+|++. ..+.||+|.+...+ .-.+..+|+++|..+ .+.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 4455667888999999999999999853 46789999987643 334688999999999 5999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeeeee
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFGLS 773 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla 773 (958)
...+|+||++...-.+++.. ++..++..+...+..||+++|..| ||||||||+|+|.+. -+.-.|.|||+|
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred eeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhH
Confidence 99999999999999998853 667889999999999999999999 999999999999975 467899999999
Q ss_pred cccccCC--------------C-CC----------------------CccceeeeeccCCCCccChhhhccC-CCCCcch
Q 002158 774 RLAPVLD--------------D-EG----------------------TMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSD 815 (958)
Q Consensus 774 ~~~~~~~--------------~-~~----------------------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~D 815 (958)
..++... . .+ ...........||+||.|||++... ..++++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 7321110 0 00 0001112235699999999999764 5788999
Q ss_pred hhhHHHHHHHHHhCCCCCCCCch----hHHHH--------H-HHhhcCc--chh---------------hhc-ccCC---
Q 002158 816 VYSLGVVLLELLTGMQPISHGKN----IVREV--------N-VARDSGM--VFS---------------IID-NRMG--- 861 (958)
Q Consensus 816 V~S~Gv~l~elltG~~P~~~~~~----~~~~~--------~-~~~~~~~--~~~---------------~i~-~~~~--- 861 (958)
|||.||+++-+++++.||....+ +.+.+ + .+.-.+. +.+ -++ +...
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 99999999999999999965332 11111 0 0111111 100 000 0000
Q ss_pred -------CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 -------SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 -------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+..+.+++.+|++.||.+|-++++.+++
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0111234578999999999999999999999864
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=5.1e-24 Score=236.28 Aligned_cols=268 Identities=21% Similarity=0.294 Sum_probs=205.8
Q ss_pred CCCCCceeeeeCCeEEEEEEECCC--cEEEEEEeccCChhcHHHHHHHHHHHHccCC----CCcceEEEEE-EeCCeEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDN--TTVAIKRAEEGSLQGQNEFLTEIKLLSRLHH----RNLVSLLGYC-DEEGEQML 698 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~-~~~~~~~l 698 (958)
.|.+.+.||+|+||.||.+..... ..+|+|............+..|+.++..+.+ +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 788899999999999999997653 4788888765433322267789999998873 6899999999 57788999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-----CCeEEeeeeee
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-----LNAKVADFGLS 773 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-----~~~kl~DFGla 773 (958)
||+.+ |.+|.++........++..++++++.|++.+|+++|+.| ++||||||.|+++... ..+.|.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999 889999886655567999999999999999999999999 9999999999999765 46999999999
Q ss_pred cccccCCCCC---CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 774 RLAPVLDDEG---TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 774 ~~~~~~~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
+........+ ..+......+.||.+|.++....+.+.+++.|+||++.++.|++.|..||.................
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8433222222 1112223457799999999999999999999999999999999999999965443222111111000
Q ss_pred cchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 851 MVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 851 ~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
.. .........+.++..+...+-..+..++|....+...+++.....
T Consensus 255 ---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 255 ---KL---LTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred ---hh---ccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 00 000022334567777777777799999999999999998887654
No 411
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=2.9e-25 Score=275.90 Aligned_cols=202 Identities=20% Similarity=0.265 Sum_probs=141.2
Q ss_pred ccCC-CCcceEEEEE-------EeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 002158 677 RLHH-RNLVSLLGYC-------DEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVF 748 (958)
Q Consensus 677 ~l~H-~niv~l~~~~-------~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ii 748 (958)
.++| +||.++++++ ...+..+++|||+ +++|+++|... ...+++.+++.++.||++||+|||+++ |+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---Iv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQG---IV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence 3445 5888888887 2334677889988 67999999743 345999999999999999999999999 99
Q ss_pred ccCCCccceEecCCC-------------------CeEEeeeeeecccccCCC---------CCCccceeeeeccCCCCcc
Q 002158 749 HRDIKASNILLDSNL-------------------NAKVADFGLSRLAPVLDD---------EGTMPTHVSTIVKGTPGYL 800 (958)
Q Consensus 749 H~Dikp~NILl~~~~-------------------~~kl~DFGla~~~~~~~~---------~~~~~~~~~~~~~gt~~y~ 800 (958)
||||||+|||++..+ .+|++|||+++....... .............||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999996544 455666666543211000 0000000112245899999
Q ss_pred ChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccc
Q 002158 801 DPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCH 880 (958)
Q Consensus 801 aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~ 880 (958)
|||++.+..++.++|||||||+||||++|..|+............ ....+ ...........++.+||+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~~L~ 250 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH--------RVLPP----QILLNWPKEASFCLWLLH 250 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH--------hhcCh----hhhhcCHHHHHHHHHhCC
Confidence 999999999999999999999999999998887532211111100 00000 011122345688899999
Q ss_pred cCCCCCCCHHHHHHH
Q 002158 881 DKPEHRPSMSDVVRE 895 (958)
Q Consensus 881 ~dP~~RPs~~evl~~ 895 (958)
.+|.+||++.|++++
T Consensus 251 ~~P~~Rps~~eil~h 265 (793)
T PLN00181 251 PEPSCRPSMSELLQS 265 (793)
T ss_pred CChhhCcChHHHhhc
Confidence 999999999999864
No 412
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=5.5e-24 Score=215.00 Aligned_cols=169 Identities=23% Similarity=0.281 Sum_probs=129.7
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.++++... ..+++.++..++.|+++||+|||+++ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc------
Confidence 78999997543 35999999999999999999999876 999999999999999 9998764221
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
...||+.|||||++.+..++.++|||||||++|||++|+.||................... ........+.
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 133 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA---DDPRDRSNLE 133 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc---CCccccccHH
Confidence 1258899999999999999999999999999999999999997544332222221110000 0000011223
Q ss_pred HHHH--HHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 866 ECVE--RFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 866 ~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
.... .+.+++.+||+.+|++||++.|+++++.....
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 3444 69999999999999999999999999877653
No 413
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=4.8e-27 Score=244.81 Aligned_cols=265 Identities=26% Similarity=0.412 Sum_probs=217.7
Q ss_pred CcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEeccc
Q 002158 111 RLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNN 190 (958)
Q Consensus 111 ~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 190 (958)
.|+.|.+++|....+.+.+.++..|.+|++.+|+++ .+|.+++.+..++.|+.++|++. .+|..+..+.+|+.|++++
T Consensus 46 ~l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 46 DLQKLILSHNDLEVLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred chhhhhhccCchhhccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 344555555555556666777888888888888887 77778888888888888888887 7777888888888888888
Q ss_pred ccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCC
Q 002158 191 NSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAV 270 (958)
Q Consensus 191 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 270 (958)
|.+. .+|+.++.+..|+.|+..+|+++ ..|..+..+.+|..|++.+|++. .+|....+++.|++|+...|-++.+|
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~--~l~~~~i~m~~L~~ld~~~N~L~tlP 199 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK--ALPENHIAMKRLKHLDCNSNLLETLP 199 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh--hCCHHHHHHHHHHhcccchhhhhcCC
Confidence 8888 66777888888888888888887 56777777888888888888885 45555555888888888888888888
Q ss_pred CCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhccccc
Q 002158 271 PDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSF 350 (958)
Q Consensus 271 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~ 350 (958)
++++.+.+|..|+|.+|++. .+|.+..+..|.+|+++.|+|+....+...++++|..|||.+|+++ ++|++++.+.++
T Consensus 200 ~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL 277 (565)
T KOG0472|consen 200 PELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSL 277 (565)
T ss_pred hhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhh
Confidence 88999999999999999998 7788888889999999999998666666779999999999999999 999999887654
Q ss_pred CccccceEeccCCCCCCCccCC-CCCCcceEEeCCCCCCC
Q 002158 351 STKARLKIDLRNNSFSNIVGDL-TLPNNVTLRLGGNPICT 389 (958)
Q Consensus 351 ~~~~l~~L~Ls~N~l~~l~~~~-~l~~L~~L~l~~N~l~~ 389 (958)
+.||+|+|.|+.++... ++ .|+.|-+.|||+.+
T Consensus 278 -----~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrT 311 (565)
T KOG0472|consen 278 -----ERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRT 311 (565)
T ss_pred -----hhhcccCCccccCCcccccc-eeeehhhcCCchHH
Confidence 49999999999999988 66 99999999999943
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=3e-26 Score=238.97 Aligned_cols=298 Identities=21% Similarity=0.244 Sum_probs=149.9
Q ss_pred EEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEeccc-ccccccCchhhcCCccchhhhccCC
Q 002158 137 FLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNN-NSIGGQIPSELSKLSTLIHLLVDNN 215 (958)
Q Consensus 137 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~L~~N 215 (958)
.|+|..|.|+.+.|.+|+.+++|++|||++|+|+.+-|++|.++.+|..|-+-+ |+|+...-+.|++|.+|+.|.+.-|
T Consensus 71 eirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan 150 (498)
T KOG4237|consen 71 EIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNAN 150 (498)
T ss_pred EEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChh
Confidence 344444444433333444444444444444444444444444444443333222 4444333334444444444444444
Q ss_pred ccccCCCcccCCCCCccEEEccCCCCCCCCccc-cccCCCCCCEEEcccCCCCC------------C-CCCCCCCCCcCE
Q 002158 216 NLSGNLPPELSELPQLCILQLDNNNFSASEIPA-TYGNFSKLVKLSLRNCNLQG------------A-VPDLSRIPNLYY 281 (958)
Q Consensus 216 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~-~~~~l~~L~~L~L~~N~l~~------------~-~~~l~~l~~L~~ 281 (958)
++.-...+.|..+++|..|.+.+|.+. .++. .|..+..++.+++..|.+-. . +..++...-..-
T Consensus 151 ~i~Cir~~al~dL~~l~lLslyDn~~q--~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p 228 (498)
T KOG4237|consen 151 HINCIRQDALRDLPSLSLLSLYDNKIQ--SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSP 228 (498)
T ss_pred hhcchhHHHHHHhhhcchhcccchhhh--hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecch
Confidence 444444444444444444444444442 2222 44444444444444443110 0 011333333333
Q ss_pred EeccCCcCCCcCCCCCCCCCcCEE----EccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccce
Q 002158 282 LDLSWNHLTGSIPSKKLSENVTTI----DLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLK 357 (958)
Q Consensus 282 L~Ls~N~l~~~~~~~~~~~~L~~L----~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~ 357 (958)
..|.++++. .++...+...++.+ ....+.........|..|++|+.|+|++|+|++.-+.++.+.. .++.
T Consensus 229 ~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a-----~l~e 302 (498)
T KOG4237|consen 229 YRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAA-----ELQE 302 (498)
T ss_pred HHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchh-----hhhh
Confidence 334444443 22222222112211 1222222323334466666666666666666644444443332 2335
Q ss_pred EeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCC
Q 002158 358 IDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASP 435 (958)
Q Consensus 358 L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~ 435 (958)
|.|..|+|..+.... ++.+|+.|+|.||+++|.. .+.|-.....+.+.|-+|||.|+|.+.|+..|++... ..
T Consensus 303 L~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~----~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~-~~ 377 (498)
T KOG4237|consen 303 LYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVA----PGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKS-VV 377 (498)
T ss_pred hhcCcchHHHHHHHhhhccccceeeeecCCeeEEEe----cccccccceeeeeehccCcccCccchHHHHHHHhhCC-CC
Confidence 666666666665544 6777777777777776633 2344445556677788888899999999999999887 66
Q ss_pred CCceeeeeceee
Q 002158 436 EPCFCAAPLRIG 447 (958)
Q Consensus 436 ~~~~c~sp~~~~ 447 (958)
+...|++|..++
T Consensus 378 ~~~~Cq~p~~~~ 389 (498)
T KOG4237|consen 378 GNPRCQSPGFVR 389 (498)
T ss_pred CCCCCCCCchhc
Confidence 668899996554
No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=4.8e-24 Score=208.62 Aligned_cols=266 Identities=21% Similarity=0.297 Sum_probs=212.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-CCCcEEEEEEeccCChhcHHHHHHHHHHHHccCC-CCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-SDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHH-RNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..|..++.||+|+||.+|.|.. .+|..||||+-...... ..+..|..+++.++| ..|..+.-|..+...-.+|||.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 4677889999999999999984 58999999987654322 246789999999975 6788888888888899999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEeeeeeecccccC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~DFGla~~~~~~ 779 (958)
. |.+|.+++.-+.+ .++..+++-++.|++.-++|+|.++ +|||||||+|+|..- ...+.++|||+|+.+...
T Consensus 93 L-GPsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 93 L-GPSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred c-CccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 9 7899999875543 3999999999999999999999999 999999999999953 456899999999988766
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
......+........||.+|.+-....+.+.+.+.|+-|+|.+|.++--|..||.+-..-...-. ...+....
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK-------yEkI~EkK 240 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK-------YEKISEKK 240 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHH-------HHHHHHhh
Confidence 66666666677788899999999999999999999999999999999999999986543211110 11111111
Q ss_pred C----CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 860 M----GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 860 ~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
+ .......|.++.-.+..|-..--++-|...-+-+...-+.....
T Consensus 241 ~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 241 MSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred cCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 1 12234567888889999999999999998877776666655444
No 416
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=2.9e-26 Score=239.05 Aligned_cols=193 Identities=28% Similarity=0.399 Sum_probs=128.7
Q ss_pred EEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccc
Q 002158 90 ELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNI 169 (958)
Q Consensus 90 ~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l 169 (958)
.++.+.|.+. .++++++++..|..|+..||.+.++|++++++.+|..|++.+|++. .+|...-+++.|++||+..|-+
T Consensus 118 ~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L 195 (565)
T KOG0472|consen 118 KLDCSSNELK-ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLL 195 (565)
T ss_pred hhhcccccee-ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhh
Confidence 3444444443 2445566666666666666666666666666666666666666666 3343333466677777777666
Q ss_pred cccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCcccc
Q 002158 170 TGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPAT 249 (958)
Q Consensus 170 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~ 249 (958)
+ .+|+.++.+.+|..|+|.+|+|. .+| .|.++..|++|+++.|+|+-.......++++|..|||.+|+++ +.|+.
T Consensus 196 ~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk--e~Pde 270 (565)
T KOG0472|consen 196 E-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK--EVPDE 270 (565)
T ss_pred h-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc--cCchH
Confidence 6 66667777777777777777776 555 5777777777777777776333333447777888888888874 56777
Q ss_pred ccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCC
Q 002158 250 YGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLT 290 (958)
Q Consensus 250 ~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 290 (958)
+.-+.+|+.|++++|.|++.+..++++ +|+.|-+.+|.+.
T Consensus 271 ~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 271 ICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred HHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchH
Confidence 777777888888888888777777777 7777777777654
No 417
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=2.9e-23 Score=212.16 Aligned_cols=265 Identities=19% Similarity=0.273 Sum_probs=214.8
Q ss_pred CCCCCceeeeeCCeEEEEEEE-CCCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEec
Q 002158 626 YFSSSTQVGQGGYGKVYKGIL-SDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.|.+.++||+|.||+++.|+. -++++||||.-...+ +..++..|.+.++.+ ..+.|...+-+...+.+-.||||++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 677889999999999999984 379999999765432 223466788888888 4789999998888888889999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-----CCeEEeeeeeeccccc
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-----LNAKVADFGLSRLAPV 778 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-----~~~kl~DFGla~~~~~ 778 (958)
|-+|.|++.-+++ .++..+++.+|.|++.-++|+|++. +|.|||||+|+||... ..+.++|||+|+.+..
T Consensus 107 -GPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 107 -GPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred -CcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 7899998876554 4999999999999999999999999 9999999999999643 4589999999999987
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc-
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID- 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~- 857 (958)
.......|........||.+||+-....+.+.+.+.|.-|+|-++.+.+-|..||.+-+....-.+ ++.|.
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~k--------YeKIGe 253 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEK--------YEKIGE 253 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHH--------HHHhcc
Confidence 777777777777888999999999999999999999999999999999999999986543211110 11111
Q ss_pred ccC----CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 858 NRM----GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 858 ~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
... ..+....|.++..-+...-..+-.+-|..+-+...+.++++....
T Consensus 254 ~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~ 305 (449)
T KOG1165|consen 254 TKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGE 305 (449)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCC
Confidence 111 112234677888888888889999999999988888888876654
No 418
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.3e-23 Score=229.63 Aligned_cols=173 Identities=17% Similarity=0.160 Sum_probs=132.8
Q ss_pred HHHHcCCCCCceeeeeCCeEEEEEEEC--CCcEEEEEEeccC-----ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC
Q 002158 621 AMATAYFSSSTQVGQGGYGKVYKGILS--DNTTVAIKRAEEG-----SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE 693 (958)
Q Consensus 621 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 693 (958)
.....+|...+.||+|+||+||+|.++ +++.||||++... .....+.|.+|++++++++|+|+++.+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 334567999999999999999999875 5778899987533 12234568999999999999999853322 2
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCC-CccceEecCCCCeEEeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDI-KASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Di-kp~NILl~~~~~~kl~DFGl 772 (958)
+..++||||++|++|... ... . ...++.|+++||+|||+.+ |+|||| ||+|||++.++.+||+|||+
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~~-~-------~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RPH-G-------DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Ccc-c-------hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 468999999999999732 111 1 1467889999999999999 999999 99999999999999999999
Q ss_pred ecccccCCCCCCccc-eeeeeccCCCCccChhhhccC
Q 002158 773 SRLAPVLDDEGTMPT-HVSTIVKGTPGYLDPEYFLTH 808 (958)
Q Consensus 773 a~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~ 808 (958)
|+.+......+.... ..-....+++.|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 997754332222211 112456789999999998654
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=1.3e-21 Score=232.48 Aligned_cols=256 Identities=26% Similarity=0.313 Sum_probs=205.7
Q ss_pred eEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccc
Q 002158 88 VRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDEN 167 (958)
Q Consensus 88 v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N 167 (958)
-..|+|++++++ .+|+.+. ++|+.|.+.+|....+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|++|
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N 272 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSN 272 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccCC
Confidence 456899999998 5777776 4899999998888888863 578999999999999 66753 468999999999
Q ss_pred cccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCcc
Q 002158 168 NITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIP 247 (958)
Q Consensus 168 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p 247 (958)
.++ .+|..+ ++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|++ +|.. ..+|+.|++++|+++ .+|
T Consensus 273 ~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~--~LP 338 (788)
T PRK15387 273 PLT-HLPALP---SGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLT--SLP 338 (788)
T ss_pred chh-hhhhch---hhcCEEECcCCccc-cccc---cccccceeECCCCcccc-CCCC---cccccccccccCccc--ccc
Confidence 998 455433 57889999999999 5665 34789999999999996 4432 256889999999996 356
Q ss_pred ccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCC
Q 002158 248 ATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQ 327 (958)
Q Consensus 248 ~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 327 (958)
.. ..+|+.|+|++|+|+++++. ..+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|++. |.. .++|+
T Consensus 339 ~l---p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~-~LP~l--~~~L~~LdLs~N~Lt~L-P~l---~s~L~ 405 (788)
T PRK15387 339 TL---PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPAL--PSGLKELIVSGNRLTSL-PVL---PSELK 405 (788)
T ss_pred cc---ccccceEecCCCccCCCCCC---Ccccceehhhccccc-cCccc--ccccceEEecCCcccCC-CCc---ccCCC
Confidence 42 25799999999999986643 357889999999998 45643 46899999999999963 432 36899
Q ss_pred eEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC-CCCCcceEEeCCCCCCC
Q 002158 328 TLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL-TLPNNVTLRLGGNPICT 389 (958)
Q Consensus 328 ~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~-~l~~L~~L~l~~N~l~~ 389 (958)
.|+|++|+|+ .+|... ..+..|+|++|+|+.+|... .+++|+.|+|++|+|+.
T Consensus 406 ~LdLS~N~Ls-sIP~l~--------~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~ 459 (788)
T PRK15387 406 ELMVSGNRLT-SLPMLP--------SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSE 459 (788)
T ss_pred EEEccCCcCC-CCCcch--------hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCc
Confidence 9999999998 577532 24668999999999999876 89999999999999964
No 420
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=3.2e-20 Score=206.54 Aligned_cols=258 Identities=30% Similarity=0.488 Sum_probs=198.8
Q ss_pred CCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChh---cHHHHHHHHHHHHccCCC-CcceEEEEEEeCCeEEEEEEe
Q 002158 627 FSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ---GQNEFLTEIKLLSRLHHR-NLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lV~E~ 702 (958)
|...+.||.|+||.||++.+. ..+++|.+...... ....|.+|+.+++.+.|+ +++++.+++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 556678999999999999986 78999988765333 366799999999999988 799999999877778999999
Q ss_pred cCCCCHHHHhccCCC-CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-CeEEeeeeeecccccCC
Q 002158 703 VPNGTLRDWLSGRTK-ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-NAKVADFGLSRLAPVLD 780 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~~~~~ 780 (958)
+.++++.+++..... ..+.......+..|++.+++|+|+.+ ++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977764432 25888999999999999999999999 99999999999999988 79999999998543322
Q ss_pred CCCCccceeeeeccCCCCccChhhhcc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCch---hHHHHHHHhhcCcchh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVLLELLTGMQPISHGKN---IVREVNVARDSGMVFS 854 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~---~~~~~~~~~~~~~~~~ 854 (958)
...... .......||..|+|||.+.+ ..+....|+||+|++++++++|..||..... ..............
T Consensus 157 ~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-- 233 (384)
T COG0515 157 STSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-- 233 (384)
T ss_pred cccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--
Confidence 111000 12345679999999999987 5788899999999999999999999765442 12222111111110
Q ss_pred hhcccCCCCC----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 IIDNRMGSYP----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....... ......+.+++..|+..+|..|.+..+....
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0000111 1223578899999999999999999887765
No 421
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.86 E-value=1.3e-23 Score=240.29 Aligned_cols=197 Identities=24% Similarity=0.237 Sum_probs=117.5
Q ss_pred cchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEecc
Q 002158 206 TLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLS 285 (958)
Q Consensus 206 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls 285 (958)
+|+++++++|++++ +|+++..+.+|+.|+..+|+++ .+|..+...++|+.|.+.+|.+..+++.+..++.|+.|+|.
T Consensus 242 nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~--~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 242 NLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV--ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred cceeeecchhhhhc-chHHHHhcccceEecccchhHH--hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeeh
Confidence 45666677777774 4578888888888888888874 45555555555555555555555555555555555555555
Q ss_pred CCcCC-------------------------------------------------C-cCCCCCCCCCcCEEEccCCcCCCc
Q 002158 286 WNHLT-------------------------------------------------G-SIPSKKLSENVTTIDLSDNYLNGS 315 (958)
Q Consensus 286 ~N~l~-------------------------------------------------~-~~~~~~~~~~L~~L~Ls~N~l~~~ 315 (958)
.|+|. . .+|.....++|+.|+|++|+|...
T Consensus 319 ~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 319 SNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred hccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 55544 2 123333445677777777777766
Q ss_pred cchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCCCCCCC
Q 002158 316 ILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTSANIPN 395 (958)
Q Consensus 316 ~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~~~~~~ 395 (958)
....+.+++.|++|+||+|+|+ .+|..+..+.. |.+|...+|+|..+|+...++.|+.+|++-|.++-..-
T Consensus 399 pas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~-----L~tL~ahsN~l~~fPe~~~l~qL~~lDlS~N~L~~~~l--- 469 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLT-TLPDTVANLGR-----LHTLRAHSNQLLSFPELAQLPQLKVLDLSCNNLSEVTL--- 469 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhh-hhhHHHHhhhh-----hHHHhhcCCceeechhhhhcCcceEEecccchhhhhhh---
Confidence 6666677777777777777776 66666655433 33555555555555544466666666666666643110
Q ss_pred CCcccccCCCCCccccccCC
Q 002158 396 TGRFCGSDAGGDETLTNSKV 415 (958)
Q Consensus 396 ~~~~~~~~~~~~~~L~~n~~ 415 (958)
.....++..+.+.|+||.|
T Consensus 470 -~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 470 -PEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred -hhhCCCcccceeeccCCcc
Confidence 0111224555666777775
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=9e-21 Score=226.94 Aligned_cols=246 Identities=26% Similarity=0.397 Sum_probs=192.3
Q ss_pred CCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecc
Q 002158 110 SRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLN 189 (958)
Q Consensus 110 ~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 189 (958)
.+...|.++++....+|..+. ++|+.|+|++|+++ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|+
T Consensus 178 ~~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred cCceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 445677887777777887664 47999999999999 6777664 58999999999998 5666553 479999999
Q ss_pred cccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCC
Q 002158 190 NNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGA 269 (958)
Q Consensus 190 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~ 269 (958)
+|++. .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+++..
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt--~LP~~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR--TLPAHLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc--cCcccch--hhHHHHHhcCCccccC
Confidence 99998 6777664 57999999999998 4666664 58999999999996 3565443 4789999999999876
Q ss_pred CCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccc
Q 002158 270 VPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKS 349 (958)
Q Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~ 349 (958)
+..+. ++|+.|++++|.+++ +|.. .+++|+.|+|++|+|+. +|..+ .++|+.|+|++|+|+ .+|..+.
T Consensus 320 P~~l~--~sL~~L~Ls~N~Lt~-LP~~-l~~sL~~L~Ls~N~L~~-LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~---- 387 (754)
T PRK15370 320 PETLP--PGLKTLEAGENALTS-LPAS-LPPELQVLDVSKNQITV-LPETL--PPTITTLDVSRNALT-NLPENLP---- 387 (754)
T ss_pred Ccccc--ccceeccccCCcccc-CChh-hcCcccEEECCCCCCCc-CChhh--cCCcCEEECCCCcCC-CCCHhHH----
Confidence 65443 689999999999985 5532 34789999999999984 55555 368999999999998 6787663
Q ss_pred cCccccceEeccCCCCCCCccCC-----CCCCcceEEeCCCCCC
Q 002158 350 FSTKARLKIDLRNNSFSNIVGDL-----TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 350 ~~~~~l~~L~Ls~N~l~~l~~~~-----~l~~L~~L~l~~N~l~ 388 (958)
..++.|++++|+|+.+|... .++++..|++.+||+.
T Consensus 388 ---~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 ---AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred ---HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 25678999999999887654 4578889999999985
No 423
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=1.4e-21 Score=227.04 Aligned_cols=253 Identities=20% Similarity=0.215 Sum_probs=185.7
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCC-hhcHHHHHHHHHH--HHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGS-LQGQNEFLTEIKL--LSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++...+.||++.|=+|.+|++++|. |+||++-+.. .-..+.|.++++- ...++|||.+++..+-......|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4556778999999999999998887 9999886654 3344555544433 4555899999999888888888999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+. -+|+|.+..+.- +...+...|+.|+..||..+|..| |+|||||.+||||+.-..+.|+||..-+......+.
T Consensus 103 vk-hnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 103 VK-HNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred Hh-hhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 95 599999976543 888899999999999999999999 999999999999999999999999877644333322
Q ss_pred CCccceeeeeccCCCCccChhhhccC----------C-CCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTH----------K-LTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~ 850 (958)
...-......-..-..|+|||.+... . .+++.||||+||++.||++ |++||.- .+.........
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~~ 252 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGNA 252 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccCc
Confidence 22112222222344579999988542 1 5678999999999999999 7888852 22221111111
Q ss_pred cchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 851 MVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 851 ~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+..-+.+ + ...+.+++..|++.||.+|-++++.++.
T Consensus 253 ~~~e~~Le~I---e---d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 253 DDPEQLLEKI---E---DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred cCHHHHHHhC---c---CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1111111111 1 1267899999999999999999999986
No 424
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=9.5e-22 Score=231.21 Aligned_cols=255 Identities=21% Similarity=0.257 Sum_probs=189.9
Q ss_pred CCceeeeeCCeEEEEEEEC-CCcEEEEEEec----c-CChhc-HHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 629 SSTQVGQGGYGKVYKGILS-DNTTVAIKRAE----E-GSLQG-QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~----~-~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
..+.+|.|++|.|+..... .....+.|.+. . ..... ...+..|+-+-..++|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4578999999988877643 34444444332 1 11111 1236678888889999999888877766666666699
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
||++ +|...+.... .+...++..+..|+..|++|+|+.| |.|||+|++|+++..+|.+||+|||.+........
T Consensus 402 ~~~~-Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9999 9999997652 3888999999999999999999999 99999999999999999999999999987643332
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCC-cchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.. ......+.|+..|+|||++...+|++ ..||||.|+++..|++|+.||................. ...+....
T Consensus 476 ~~---~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~--~~~~~~~~ 550 (601)
T KOG0590|consen 476 KN---IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSD--QRNIFEGP 550 (601)
T ss_pred hh---hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcccc--ccccccCh
Confidence 11 24456788999999999999999988 68999999999999999999964332211110000000 00011111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
.......+.....++.++++.||.+|-++++|++
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 1223466788899999999999999999999986
No 425
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.8e-20 Score=190.49 Aligned_cols=138 Identities=17% Similarity=0.137 Sum_probs=108.2
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChh--c-------HHH-----------------HHHHHHHHHccCCCCc
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ--G-------QNE-----------------FLTEIKLLSRLHHRNL 683 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~H~ni 683 (958)
...||+|+||.||+|...+|+.||||+++..... . ..+ ...|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999999888999999998754211 1 012 2349999999988776
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHh-hhcCCCCeeccCCCccceEecCC
Q 002158 684 VSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYL-HTEAHPPVFHRDIKASNILLDSN 762 (958)
Q Consensus 684 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yL-H~~~~~~iiH~Dikp~NILl~~~ 762 (958)
.....+... ..++||||++++++....... ..++..++.+++.|++.+|.|+ |+.+ |+||||||+|||++ +
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-C
Confidence 444333222 238999999988776543222 3488999999999999999999 6888 99999999999998 5
Q ss_pred CCeEEeeeeeecc
Q 002158 763 LNAKVADFGLSRL 775 (958)
Q Consensus 763 ~~~kl~DFGla~~ 775 (958)
+.++|+|||+|..
T Consensus 154 ~~v~LiDFG~a~~ 166 (190)
T cd05147 154 GKLYIIDVSQSVE 166 (190)
T ss_pred CcEEEEEcccccc
Confidence 7899999999874
No 426
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=1.5e-20 Score=192.59 Aligned_cols=174 Identities=16% Similarity=0.109 Sum_probs=136.0
Q ss_pred HHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHH---H------HHHHHHHHHccCCCCcceEEEEEE
Q 002158 621 AMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQN---E------FLTEIKLLSRLHHRNLVSLLGYCD 691 (958)
Q Consensus 621 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~H~niv~l~~~~~ 691 (958)
.....+|...+++|.|+||.||.+.. ++..+|||.+........+ . |.+|++.+.+++|++|..+.+++.
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 34577899999999999999999765 6778999999765333222 2 689999999999999999999865
Q ss_pred eC--------CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC
Q 002158 692 EE--------GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL 763 (958)
Q Consensus 692 ~~--------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~ 763 (958)
.. +..++||||++|.+|.++.. ++. ....+++.++..+|+.| ++|||+||+||+++.++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g 172 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC
Confidence 33 35789999999999988742 222 24569999999999999 99999999999999988
Q ss_pred CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh
Q 002158 764 NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT 828 (958)
Q Consensus 764 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt 828 (958)
++|+|||..+...... .-..+.....+..++|+|+||+++.....
T Consensus 173 -i~liDfg~~~~~~e~~-------------------a~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRK-------------------AKDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred -EEEEECCCcccccchh-------------------hHHHHHHHhHhcccccccceeEeehHHHH
Confidence 9999999876432100 00114455567789999999999876543
No 427
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=1.4e-19 Score=215.15 Aligned_cols=260 Identities=22% Similarity=0.262 Sum_probs=200.3
Q ss_pred CCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecc
Q 002158 110 SRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLN 189 (958)
Q Consensus 110 ~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 189 (958)
..-..|+++++....+|+.+. .+|+.|+|++|+++ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|+
T Consensus 201 ~~~~~LdLs~~~LtsLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCCcEEEcCCCCCCcCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 334567888777778998876 48999999999999 57752 578999999999999 45643 4689999999
Q ss_pred cccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCC
Q 002158 190 NNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGA 269 (958)
Q Consensus 190 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~ 269 (958)
+|.|+ .+|..+ .+|+.|+|++|+|+. +|. .+++|+.|+|++|+++. +|... .+|+.|++++|+|+++
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~--Lp~lp---~~L~~L~Ls~N~L~~L 337 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS--LPALP---SELCKLWAYNNQLTSL 337 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCcccc--CCCCc---ccccccccccCccccc
Confidence 99998 555533 578889999999984 444 24789999999999973 45432 4688899999999875
Q ss_pred CCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccc
Q 002158 270 VPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKS 349 (958)
Q Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~ 349 (958)
+. + ..+|+.|+|++|+|++ +|. ...+|+.|++++|+|+. +|.. ..+|+.|+|++|+|+ .+|..
T Consensus 338 P~-l--p~~Lq~LdLS~N~Ls~-LP~--lp~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP~l------ 400 (788)
T PRK15387 338 PT-L--PSGLQELSVSDNQLAS-LPT--LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLPVL------ 400 (788)
T ss_pred cc-c--ccccceEecCCCccCC-CCC--CCcccceehhhcccccc-Cccc---ccccceEEecCCccc-CCCCc------
Confidence 53 2 2589999999999994 554 34789999999999985 4443 357999999999998 46643
Q ss_pred cCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCC
Q 002158 350 FSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCP 418 (958)
Q Consensus 350 ~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~ 418 (958)
...++.|++++|+|+.+|.. ..+|+.|++++|.++.. +. .++.......+.|.+|++...
T Consensus 401 --~s~L~~LdLS~N~LssIP~l--~~~L~~L~Ls~NqLt~L---P~--sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 401 --PSELKELMVSGNRLTSLPML--PSGLLSLSVYRNQLTRL---PE--SLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred --ccCCCEEEccCCcCCCCCcc--hhhhhhhhhccCccccc---Ch--HHhhccCCCeEECCCCCCCch
Confidence 24678999999999998864 45788999999999742 22 244455667788999998643
No 428
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.5e-19 Score=180.84 Aligned_cols=190 Identities=13% Similarity=0.057 Sum_probs=141.1
Q ss_pred CCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhc----HHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEEe
Q 002158 628 SSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQG----QNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 628 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.....|++|+||+||.+.. .+.+++.+.+....... ...|.+|+++|++++ |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3457899999999997765 67888888776643311 235889999999995 5889999987 357999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCC-CccceEecCCCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDI-KASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Di-kp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
+.|.+|...+.. ....++.|++++|+++|++| |+|||| ||+|||++.++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999999765421 11357789999999999999 999999 79999999999999999999985432111
Q ss_pred C------CCccceeeeeccCCCCccChhhhccC-CCC-CcchhhhHHHHHHHHHhCCCCCC
Q 002158 782 E------GTMPTHVSTIVKGTPGYLDPEYFLTH-KLT-DKSDVYSLGVVLLELLTGMQPIS 834 (958)
Q Consensus 782 ~------~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~~DV~S~Gv~l~elltG~~P~~ 834 (958)
. .....-.......++.|++|+...-- ..+ .+.+.++-|+-+|.++|+..+..
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 0 00000001123467888888865432 233 47899999999999999988764
No 429
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=2.7e-19 Score=182.59 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=110.5
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChh--c------------------------HHHHHHHHHHHHccCCCCc
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ--G------------------------QNEFLTEIKLLSRLHHRNL 683 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~H~ni 683 (958)
...||+|+||.||+|...+|+.||||+++..... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999878999999998754211 0 1124579999999999987
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCHHH-HhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecC
Q 002158 684 VSLLGYCDEEGEQMLVYEFVPNGTLRD-WLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDS 761 (958)
Q Consensus 684 v~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~ 761 (958)
.....+.... .+|||||++++++.. .+.. ..++..++.+++.|++.++.++|+ .| |+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence 5554443332 489999998885543 3432 237788899999999999999999 88 99999999999999
Q ss_pred CCCeEEeeeeeeccc
Q 002158 762 NLNAKVADFGLSRLA 776 (958)
Q Consensus 762 ~~~~kl~DFGla~~~ 776 (958)
++.++|+|||+++..
T Consensus 153 ~~~~~liDFG~a~~~ 167 (190)
T cd05145 153 DGKPYIIDVSQAVEL 167 (190)
T ss_pred CCCEEEEEcccceec
Confidence 899999999999754
No 430
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=1.4e-18 Score=183.52 Aligned_cols=229 Identities=21% Similarity=0.249 Sum_probs=149.2
Q ss_pred CCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCC----------CCcceEEEEEE---
Q 002158 629 SSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHH----------RNLVSLLGYCD--- 691 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H----------~niv~l~~~~~--- 691 (958)
..+.||.|+++.||.+++. +++++|||++.... ....+++.+|.-....+.+ -.++.-++...
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 3468999999999999987 58999999875432 2335667777765555432 12222222211
Q ss_pred ------eC---C-----eEEEEEEecCCCCHHHHhcc---C--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCC
Q 002158 692 ------EE---G-----EQMLVYEFVPNGTLRDWLSG---R--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDI 752 (958)
Q Consensus 692 ------~~---~-----~~~lV~E~~~~gsL~~~l~~---~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Di 752 (958)
.. . ..+++|+-+ .++|.+++.. . ....+....++.+..|+++.+++||+.| ++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEeccc
Confidence 11 1 236788888 5788887642 2 1223666677888899999999999999 999999
Q ss_pred CccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC--------CCCCcchhhhHHHHHH
Q 002158 753 KASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH--------KLTDKSDVYSLGVVLL 824 (958)
Q Consensus 753 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DV~S~Gv~l~ 824 (958)
||+|++++.+|.++|+||+...... ........+..|.+||..... .++.+.|.|++|+++|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g----------~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly 241 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAG----------TRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY 241 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETT----------EEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecC----------ceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence 9999999999999999999876431 111113456789999987442 4778999999999999
Q ss_pred HHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCC
Q 002158 825 ELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHR 886 (958)
Q Consensus 825 elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 886 (958)
.|++|..||........ .+....... +.|+.+..||..+++.+|.+|
T Consensus 242 ~lWC~~lPf~~~~~~~~--------------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 242 SLWCGRLPFGLSSPEAD--------------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHSS-STCCCGGGST--------------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHccCCCCCCCcccc--------------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999974332110 000222334 788999999999999999988
No 431
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=2e-19 Score=215.36 Aligned_cols=260 Identities=26% Similarity=0.397 Sum_probs=206.2
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccc
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDE 166 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 166 (958)
+.+.|++.+++++. +|..+. ++|+.|++++|....+|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|++
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 46789999998885 555553 579999999888889998765 58999999999999 6787664 4799999999
Q ss_pred ccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCc
Q 002158 167 NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEI 246 (958)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 246 (958)
|+++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|++++|+++ .+
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt--~L 319 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT--AL 319 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc--cC
Confidence 9999 6777664 58999999999999 5776554 589999999999995 555543 58999999999997 35
Q ss_pred cccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCC
Q 002158 247 PATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFL 326 (958)
Q Consensus 247 p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L 326 (958)
|..+. ++|+.|++++|.+++++..+. ++|+.|+|++|+|+ .+|.. ..++|+.|+|++|+|+.. |..+. ..|
T Consensus 320 P~~l~--~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~-~LP~~-lp~~L~~LdLs~N~Lt~L-P~~l~--~sL 390 (754)
T PRK15370 320 PETLP--PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQIT-VLPET-LPPTITTLDVSRNALTNL-PENLP--AAL 390 (754)
T ss_pred Ccccc--ccceeccccCCccccCChhhc--CcccEEECCCCCCC-cCChh-hcCCcCEEECCCCcCCCC-CHhHH--HHH
Confidence 65443 689999999999998766554 79999999999998 45543 347999999999999954 44443 369
Q ss_pred CeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceE
Q 002158 327 QTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTL 380 (958)
Q Consensus 327 ~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L 380 (958)
+.|++++|+|+ .+|..+...... .+.+..|+|.+|.|+. ..+++|+.+
T Consensus 391 ~~LdLs~N~L~-~LP~sl~~~~~~-~~~l~~L~L~~Npls~----~tl~~L~~L 438 (754)
T PRK15370 391 QIMQASRNNLV-RLPESLPHFRGE-GPQPTRIIVEYNPFSE----RTIQNMQRL 438 (754)
T ss_pred HHHhhccCCcc-cCchhHHHHhhc-CCCccEEEeeCCCccH----HHHHHHHHh
Confidence 99999999998 788776554332 3567799999999973 244444444
No 432
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.79 E-value=2.4e-18 Score=220.58 Aligned_cols=286 Identities=18% Similarity=0.209 Sum_probs=183.4
Q ss_pred eeEEEEccCC------cCCCCccccccCCC-CcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCC
Q 002158 87 HVRELQLLSM------NLSGNLAPELGQLS-RLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNL 159 (958)
Q Consensus 87 ~v~~L~L~~~------~l~~~~~~~l~~L~-~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L 159 (958)
+++.|.+..+ ++...+|..+..++ +|+.|.+.++....+|..| ...+|++|+|++|.+. .++..+..+++|
T Consensus 559 ~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~L 636 (1153)
T PLN03210 559 NLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGL 636 (1153)
T ss_pred cccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCcccc-ccccccccCCCC
Confidence 4555555433 22334555555553 4666666666666666665 4566777777776666 566666666677
Q ss_pred CEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCC
Q 002158 160 NRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNN 239 (958)
Q Consensus 160 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 239 (958)
++|+|++|.....+| .++.+++|+.|+|++|.....+|..+.++++|+.|++++|.....+|..+ ++++|+.|+|++|
T Consensus 637 k~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc 714 (1153)
T PLN03210 637 RNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGC 714 (1153)
T ss_pred CEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCC
Confidence 777776655443454 36666677777776665444666666666677777776654433455444 5666666666665
Q ss_pred CCCCCCccccccCCCCCCEEEcccCCCCCCCCC------------------------------CCCCCCcCEEeccCCcC
Q 002158 240 NFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD------------------------------LSRIPNLYYLDLSWNHL 289 (958)
Q Consensus 240 ~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~------------------------------l~~l~~L~~L~Ls~N~l 289 (958)
... ..+|.. ..+|+.|+|++|.+...+.. ....++|+.|+|++|..
T Consensus 715 ~~L-~~~p~~---~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~ 790 (1153)
T PLN03210 715 SRL-KSFPDI---STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPS 790 (1153)
T ss_pred CCc-cccccc---cCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCC
Confidence 432 223322 23455556665555443321 11235788899998876
Q ss_pred CCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCC
Q 002158 290 TGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNI 368 (958)
Q Consensus 290 ~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l 368 (958)
.+.+|.. ..+++|+.|+|++|..-+.+|..+ ++++|+.|+|++|.....+|.. ...++.|+|++|.|+.+
T Consensus 791 l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~--------~~nL~~L~Ls~n~i~~i 861 (1153)
T PLN03210 791 LVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI--------STNISDLNLSRTGIEEV 861 (1153)
T ss_pred ccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc--------ccccCEeECCCCCCccC
Confidence 6666654 557899999999986555666655 7899999999998766566542 24577899999999999
Q ss_pred ccCC-CCCCcceEEeCC-CCCCC
Q 002158 369 VGDL-TLPNNVTLRLGG-NPICT 389 (958)
Q Consensus 369 ~~~~-~l~~L~~L~l~~-N~l~~ 389 (958)
|... .+++|+.|+|.+ |.+.+
T Consensus 862 P~si~~l~~L~~L~L~~C~~L~~ 884 (1153)
T PLN03210 862 PWWIEKFSNLSFLDMNGCNNLQR 884 (1153)
T ss_pred hHHHhcCCCCCEEECCCCCCcCc
Confidence 8766 899999999998 44543
No 433
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.78 E-value=1.2e-20 Score=216.21 Aligned_cols=241 Identities=30% Similarity=0.419 Sum_probs=165.2
Q ss_pred CCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhc
Q 002158 133 SSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLV 212 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 212 (958)
.+|++++++.|+++ .+|++++.+.+|+.|++.+|+|+ .+|..+..+++|+.|++.+|.+. .+|.....++.|++|+|
T Consensus 241 ~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL 317 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDL 317 (1081)
T ss_pred ccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeee
Confidence 46777777777777 56677777777777777777775 66777777777777777777777 66666777777777777
Q ss_pred cCCccccCCCcccCCCCC-ccEEEccCCCCCCCCccc-cccCCCCCCEEEcccCCCCCCC-CCCCCCCCcCEEeccCCcC
Q 002158 213 DNNNLSGNLPPELSELPQ-LCILQLDNNNFSASEIPA-TYGNFSKLVKLSLRNCNLQGAV-PDLSRIPNLYYLDLSWNHL 289 (958)
Q Consensus 213 ~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~p~-~~~~l~~L~~L~L~~N~l~~~~-~~l~~l~~L~~L~Ls~N~l 289 (958)
..|+|....+..|.-+.. |+.|..+.|++. ..|. .-..++.|+.|++.+|.|+... |.+.++.+|+.|+|++|+|
T Consensus 318 ~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~--~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL 395 (1081)
T KOG0618|consen 318 QSNNLPSLPDNFLAVLNASLNTLNVSSNKLS--TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRL 395 (1081)
T ss_pred hhccccccchHHHhhhhHHHHHHhhhhcccc--ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccc
Confidence 777777444434444443 666777777764 2332 1223455777777777777543 4577777777777777777
Q ss_pred CCcCCCC--CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCC
Q 002158 290 TGSIPSK--KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSN 367 (958)
Q Consensus 290 ~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~ 367 (958)
. .+|.. ..+..|++|+||+|+|+ .+|..+..++.|++|...+|+|. ..| .+.++ +.++.+|+|.|+|+.
T Consensus 396 ~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l-----~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 396 N-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQL-----PQLKVLDLSCNNLSE 466 (1081)
T ss_pred c-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhc-----CcceEEecccchhhh
Confidence 6 45544 33467777777777777 45577778888888888888887 666 45443 345578888888877
Q ss_pred Cc--cCCCCCCcceEEeCCCCC
Q 002158 368 IV--GDLTLPNNVTLRLGGNPI 387 (958)
Q Consensus 368 l~--~~~~l~~L~~L~l~~N~l 387 (958)
+. ....-++|++|||+||.+
T Consensus 467 ~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 467 VTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhhhhCCCcccceeeccCCcc
Confidence 43 333447888888888886
No 434
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.78 E-value=4.3e-18 Score=218.24 Aligned_cols=287 Identities=22% Similarity=0.284 Sum_probs=225.5
Q ss_pred eeeEEEEccCCcCCC--CccccccCCCCcceeeccCc-------ccCCCCccccCCC-CCcEEEeeCCCCCCCCChhhcC
Q 002158 86 LHVRELQLLSMNLSG--NLAPELGQLSRLQYYFMWND-------LTGTIPKEIGNIS-SLIFLLLNGNKLSGSLPDELGY 155 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~--~~~~~l~~L~~L~~L~l~n~-------~~~~ip~~i~~l~-~L~~L~Ls~n~l~~~~p~~l~~ 155 (958)
..+..+.+.-..+.. .....|..+++|+.|.++++ ....+|..+..++ +|+.|++.++.+. .+|..+ .
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~ 609 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-R 609 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-C
Confidence 345555544333322 23456888999999977543 2346788888875 7999999999998 888877 5
Q ss_pred CCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEE
Q 002158 156 LSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQ 235 (958)
Q Consensus 156 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 235 (958)
..+|++|++.+|++. .++..+..+++|+.|+|++|...+.+|. +..+++|+.|+|++|.....+|..+..+++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 789999999999998 6788889999999999998875557775 88899999999999987778999999999999999
Q ss_pred ccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCC------------------
Q 002158 236 LDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKK------------------ 297 (958)
Q Consensus 236 L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~------------------ 297 (958)
+++|... ..+|..+ ++++|+.|+|++|......|.+ .++|++|+|++|.+. .+|...
T Consensus 688 L~~c~~L-~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~--~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l 762 (1153)
T PLN03210 688 MSRCENL-EILPTGI-NLKSLYRLNLSGCSRLKSFPDI--STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKL 762 (1153)
T ss_pred CCCCCCc-CccCCcC-CCCCCCEEeCCCCCCccccccc--cCCcCeeecCCCccc-cccccccccccccccccccchhhc
Confidence 9987543 3567655 7899999999999765555543 468899999999976 344221
Q ss_pred -------------CCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCC
Q 002158 298 -------------LSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNS 364 (958)
Q Consensus 298 -------------~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~ 364 (958)
.+++|+.|+|++|.....+|..++++++|+.|+|++|...+.+|..+ ..+.|+.|+|++|.
T Consensus 763 ~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~------~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 763 WERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI------NLESLESLDLSGCS 836 (1153)
T ss_pred cccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC------CccccCEEECCCCC
Confidence 12578899999998888899999999999999999987666888765 24578899999964
Q ss_pred -CCCCccCCCCCCcceEEeCCCCCCC
Q 002158 365 -FSNIVGDLTLPNNVTLRLGGNPICT 389 (958)
Q Consensus 365 -l~~l~~~~~l~~L~~L~l~~N~l~~ 389 (958)
+..++.. ..+|+.|+|++|.+..
T Consensus 837 ~L~~~p~~--~~nL~~L~Ls~n~i~~ 860 (1153)
T PLN03210 837 RLRTFPDI--STNISDLNLSRTGIEE 860 (1153)
T ss_pred cccccccc--ccccCEeECCCCCCcc
Confidence 4444432 4689999999999864
No 435
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=2.1e-18 Score=176.63 Aligned_cols=136 Identities=19% Similarity=0.242 Sum_probs=107.3
Q ss_pred CCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHcc-----CCCCcceEEEEEEeCC---eEE-E
Q 002158 628 SSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-----HHRNLVSLLGYCDEEG---EQM-L 698 (958)
Q Consensus 628 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~---~~~-l 698 (958)
...+.||+|+||.||. +.+....+||++........+.+.+|+++++.+ .||||++++|++.++. ..+ +
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 4567899999999996 544344479988765444567799999999999 5799999999998863 433 7
Q ss_pred EEEe--cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHH-HHhhhcCCCCeeccCCCccceEecC----CCCeEEeeee
Q 002158 699 VYEF--VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGI-LYLHTEAHPPVFHRDIKASNILLDS----NLNAKVADFG 771 (958)
Q Consensus 699 V~E~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL-~yLH~~~~~~iiH~Dikp~NILl~~----~~~~kl~DFG 771 (958)
|||| +++|+|.+++.+.. +++. ..++.+++.++ +|||+++ |+||||||+|||++. ++.++|+||+
T Consensus 83 I~e~~G~~~~tL~~~l~~~~---~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQCR---YEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EecCCCCcchhHHHHHHccc---ccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 8999 55799999996532 5544 35677888777 9999999 999999999999974 3479999954
Q ss_pred ee
Q 002158 772 LS 773 (958)
Q Consensus 772 la 773 (958)
-+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 436
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=9.4e-19 Score=196.08 Aligned_cols=216 Identities=27% Similarity=0.448 Sum_probs=161.4
Q ss_pred HHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCc
Q 002158 675 LSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKA 754 (958)
Q Consensus 675 l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp 754 (958)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+... ...+++-....+..+++.||+|+|+.. -..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeecc
Confidence 45789999999999999999999999999999999999864 345999999999999999999999765 139999999
Q ss_pred cceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCC-------CCCcchhhhHHHHHHHHH
Q 002158 755 SNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK-------LTDKSDVYSLGVVLLELL 827 (958)
Q Consensus 755 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DV~S~Gv~l~ell 827 (958)
+|+++|....+||+|||+........... ......-..-|.|||.+.... .+.++||||||++++|++
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~-----~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPE-----AHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred ccceeeeeEEEEechhhhccccccccccc-----ccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 99999999999999999987664311111 111122344699999997642 356899999999999999
Q ss_pred hCCCCCCCCchh---HHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 828 TGMQPISHGKNI---VREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 828 tG~~P~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
+.+.||...... .+.+....+.+. ....+..... .+.++.+..++.+||..+|.+||++++|-..++.+.+
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~~~~--~~~rP~i~~~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKKGGS--NPFRPSIELL-NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred hccCccccccccCChHHHHHHHHhcCC--CCcCcchhhh-hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999999753221 112222221010 0001111101 1455579999999999999999999999887776654
No 437
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.6e-19 Score=201.40 Aligned_cols=224 Identities=28% Similarity=0.309 Sum_probs=181.8
Q ss_pred eeeeCCeEEEEEE----ECCCcEEEEEEeccCChhc--HHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 633 VGQGGYGKVYKGI----LSDNTTVAIKRAEEGSLQG--QNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 633 lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+|+|.||.|+.+. .+.|..+|.|+.++..... ......|..++...+ ||.++++.-.+..+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999765 2357788999876643221 125567888999997 99999999999999999999999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|.|...+..... ++......+...+|-|++++|+.+ |+|||+|++||+++.+|.+++.|||+++..-...
T Consensus 82 g~lft~l~~~~~--f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----- 151 (612)
T KOG0603|consen 82 GDLFTRLSKEVM--FDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----- 151 (612)
T ss_pred chhhhccccCCc--hHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh-----
Confidence 999988865443 777777888889999999999999 9999999999999999999999999998642211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCCh
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPS 865 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 865 (958)
..+||..|||||++. ....++|.||||++++||+||..||.. . .+. .|-..-..+|.
T Consensus 152 ------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~---~~~----------~Il~~~~~~p~ 208 (612)
T KOG0603|consen 152 ------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--D---TMK----------RILKAELEMPR 208 (612)
T ss_pred ------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--H---HHH----------HHhhhccCCch
Confidence 117999999999998 567899999999999999999999975 1 111 11122234577
Q ss_pred HHHHHHHHHHHHccccCCCCCCCH
Q 002158 866 ECVERFVTLALRCCHDKPEHRPSM 889 (958)
Q Consensus 866 ~~~~~l~~li~~cl~~dP~~RPs~ 889 (958)
.......+++.++...+|..|--.
T Consensus 209 ~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 209 ELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hhhHHHHHHHHHHHhhCHHHHhcc
Confidence 888888999999999999999654
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=9e-21 Score=176.38 Aligned_cols=165 Identities=31% Similarity=0.491 Sum_probs=101.7
Q ss_pred CCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEE
Q 002158 155 YLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCIL 234 (958)
Q Consensus 155 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 234 (958)
++.+.+.|-|++|+++ .+|+.++.+.+|+.|++.+|+|. .+|..++.+++|+.|+++-|++. ..|..|+.+|.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3444444555555554 44445555555555555555555 45555555555555555555555 455566666666666
Q ss_pred EccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCC
Q 002158 235 QLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNG 314 (958)
Q Consensus 235 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~ 314 (958)
||.+|++....+|..|..+..|+.|+|++|.+.-.+++++.+++|+.|.+.+|.+-
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll------------------------ 163 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL------------------------ 163 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh------------------------
Confidence 66666665555666666666666666666666656666666666666666666654
Q ss_pred ccchhccCCCCCCeEeeecccCCCccchhhhcc
Q 002158 315 SILESISNLPFLQTLSLENNFLTGSIPATIWQN 347 (958)
Q Consensus 315 ~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~ 347 (958)
..|..++.+..|++|.+++|+++ .+|.++..+
T Consensus 164 ~lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 164 SLPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred hCcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 45677788888888888888887 777776543
No 439
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.2e-17 Score=174.90 Aligned_cols=201 Identities=21% Similarity=0.264 Sum_probs=145.6
Q ss_pred CCCCcceEEEEEEe---------------------------CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHH
Q 002158 679 HHRNLVSLLGYCDE---------------------------EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALD 731 (958)
Q Consensus 679 ~H~niv~l~~~~~~---------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 731 (958)
+|||||++.++|.+ ....|+||...+ .+|+.|+..+. .+...+.-+..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC---CchHHHHHHHHH
Confidence 69999999887633 234689998884 59999997654 556667788999
Q ss_pred HHHHHHHhhhcCCCCeeccCCCccceEe--cCCC--CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc
Q 002158 732 SAKGILYLHTEAHPPVFHRDIKASNILL--DSNL--NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT 807 (958)
Q Consensus 732 ia~aL~yLH~~~~~~iiH~Dikp~NILl--~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 807 (958)
+++|+.|||.+| |.|||+|++|||+ |+|+ .+.|+|||.+-.-+..+-.-.. ........|...-||||+...
T Consensus 350 lLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy-~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 350 LLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPY-ESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeecccccccccc-ccccccCCCcceecchhhhhc
Confidence 999999999999 9999999999999 4444 4789999987432221111111 111223457778999999865
Q ss_pred CC-----C-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHcccc
Q 002158 808 HK-----L-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHD 881 (958)
Q Consensus 808 ~~-----~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~ 881 (958)
.+ . -.|+|.|+.|.+.||+++...||.......-..+. .-...++.+|..++..+.+++...++.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~---------Yqe~qLPalp~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT---------YQESQLPALPSRVPPVARQLVFDLLKR 496 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh---------hhhhhCCCCcccCChHHHHHHHHHhcC
Confidence 42 1 23899999999999999999999753221111111 112334667888999999999999999
Q ss_pred CCCCCCCHHHHHHHH
Q 002158 882 KPEHRPSMSDVVREL 896 (958)
Q Consensus 882 dP~~RPs~~evl~~L 896 (958)
||.+|++..-....|
T Consensus 497 ~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 497 DPSKRVSPNIAANVL 511 (598)
T ss_pred CccccCCccHHHhHH
Confidence 999999876544443
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=1.3e-17 Score=199.31 Aligned_cols=254 Identities=21% Similarity=0.280 Sum_probs=187.3
Q ss_pred HHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC---CCCcceEEEEEEeCC
Q 002158 618 KELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH---HRNLVSLLGYCDEEG 694 (958)
Q Consensus 618 ~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~ 694 (958)
.+.+...+.|.+.+.||+|+||+||+|...+|+.||+|+-+.....+ |.-=.+++.+|+ -+-|..+...+...+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 45566677888899999999999999998889999999987655432 333444555555 234555556666677
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-------CCCeEE
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-------NLNAKV 767 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-------~~~~kl 767 (958)
..+||+||.+.|+|.+++. ..+.+++.-.+.++.|+++-+++||..+ |||+||||+|+||.. ...++|
T Consensus 768 ~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred cceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEE
Confidence 8899999999999999997 3445999999999999999999999999 999999999999942 345899
Q ss_pred eeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 768 ADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 768 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
+|||-+-.+....+. ......++|-.+--+|+..+...++.+|-|.+..+++-|+.|+.- . .
T Consensus 843 IDfG~siDm~lfp~~-----~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~-----------q--~ 904 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDG-----TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM-----------E--V 904 (974)
T ss_pred EecccceeeeEcCCC-----cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH-----------H--h
Confidence 999998765443332 234567789999999999999999999999999999999998641 1 1
Q ss_pred hcCcchhhhcccCCCCChHH-HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 848 DSGMVFSIIDNRMGSYPSEC-VERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 848 ~~~~~~~~i~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
..+....+ +.. ++.-. .+-+.++...+|+.|-..=|...++...++....
T Consensus 905 ~~g~~~~~-~~~---~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 905 KNGSSWMV-KTN---FPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred cCCcceec-ccc---chhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 11111111 111 11111 1224456666666555555788888777777653
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=1.6e-19 Score=201.02 Aligned_cols=200 Identities=26% Similarity=0.266 Sum_probs=100.0
Q ss_pred EEccCCcCCC-CccccccCCCCcceeeccCccc-----CCCCccccCCCCCcEEEeeCCCCCC------CCChhhcCCCC
Q 002158 91 LQLLSMNLSG-NLAPELGQLSRLQYYFMWNDLT-----GTIPKEIGNISSLIFLLLNGNKLSG------SLPDELGYLSN 158 (958)
Q Consensus 91 L~L~~~~l~~-~~~~~l~~L~~L~~L~l~n~~~-----~~ip~~i~~l~~L~~L~Ls~n~l~~------~~p~~l~~l~~ 158 (958)
|+|..+.+++ .....+..+..|+.|.+.++.. ..++..+...++|++|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 5566666653 3334444555566666654443 2244455556666666666666552 12334555666
Q ss_pred CCEEecccccccccCccccccccc---cceEecccccccc----cCchhhcCC-ccchhhhccCCccccC----CCcccC
Q 002158 159 LNRLQVDENNITGTIPKSFANLSR---VRHLHLNNNSIGG----QIPSELSKL-STLIHLLVDNNNLSGN----LPPELS 226 (958)
Q Consensus 159 L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~----~~p~~l~~l-~~L~~L~L~~N~l~~~----~~~~l~ 226 (958)
|++|++++|.+.+..+..+..+.+ |+.|++++|++++ .+...+..+ ++|+.|++++|.+++. +...+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 162 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH
Confidence 666666666665544444444444 6666666666552 122233444 5555555555555521 222344
Q ss_pred CCCCccEEEccCCCCCCCC---ccccccCCCCCCEEEcccCCCCCCCC-----CCCCCCCcCEEeccCCcCC
Q 002158 227 ELPQLCILQLDNNNFSASE---IPATYGNFSKLVKLSLRNCNLQGAVP-----DLSRIPNLYYLDLSWNHLT 290 (958)
Q Consensus 227 ~l~~L~~L~L~~N~l~~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~ 290 (958)
.+++|++|+|++|.+++.. ++..+..+++|+.|+|++|.+++... .+..+++|++|++++|.++
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc
Confidence 4455555555555554211 11223333455555555555543221 1334445555555555544
No 442
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.71 E-value=2.7e-19 Score=166.58 Aligned_cols=154 Identities=29% Similarity=0.470 Sum_probs=71.8
Q ss_pred CCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhh
Q 002158 132 ISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLL 211 (958)
Q Consensus 132 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 211 (958)
+++++.|.||+|+++ .+|+.+..|.+|+.|++.+|+++ .+|.+++.+++|+.|+++-|++. ..|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 334444444444444 34444444444444444444444 44444444444444444444444 4444444444444444
Q ss_pred ccCCccc-cCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCC
Q 002158 212 VDNNNLS-GNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLT 290 (958)
Q Consensus 212 L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 290 (958)
|.+|+++ ..+|..|..++.|+-|+|++|.+ ..+|..++++++|+.|.+..|.+-..+.+++.++.|++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndf--e~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDF--EILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCc--ccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceee
Confidence 4444443 23344444444444444444444 23444444444444444444444444444444455555555555544
No 443
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=6.2e-17 Score=168.61 Aligned_cols=134 Identities=19% Similarity=0.328 Sum_probs=114.4
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCChh--------cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ--------GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+.||+|++|.||+|.+ .|..|+||+....... ...++.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 6778999986543211 124578899999999999998888887777889999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
++|++|.+++.... . ++..++.+++.+|.++|+.+ ++|||++|+|||++ ++.++|+|||.++.
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986432 1 78899999999999999999 99999999999999 78999999998763
No 444
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.71 E-value=3.7e-19 Score=186.31 Aligned_cols=341 Identities=20% Similarity=0.189 Sum_probs=257.1
Q ss_pred EEccCCcCCCCccccccCCCCcceeeccCcccCCCCcc-ccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccc-cc
Q 002158 91 LQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKE-IGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDE-NN 168 (958)
Q Consensus 91 L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~-i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~-N~ 168 (958)
++-++.+++. +|..+. ..-..+.|..|.+..||+. |+.+++|+.||||+|+|+.+-|++|..|.+|.+|-+.+ |+
T Consensus 51 VdCr~~GL~e-VP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLTE-VPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCccc-CcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 3445555554 332221 2234567888888888855 99999999999999999999999999999988887777 99
Q ss_pred ccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC-----
Q 002158 169 ITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA----- 243 (958)
Q Consensus 169 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~----- 243 (958)
|+......|.+|..|+.|.+.-|++.-...+.|..+++|..|.+.+|.+..+--..|..+..++.+.+..|.+..
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 997777889999999999999999998888999999999999999999996666699999999999999998421
Q ss_pred ------CCccccccCCCCCCEEEcccCCCCCCCCC-C-CCCCCcCEEeccCCcCCCcCCCC--CCCCCcCEEEccCCcCC
Q 002158 244 ------SEIPATYGNFSKLVKLSLRNCNLQGAVPD-L-SRIPNLYYLDLSWNHLTGSIPSK--KLSENVTTIDLSDNYLN 313 (958)
Q Consensus 244 ------~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l-~~l~~L~~L~Ls~N~l~~~~~~~--~~~~~L~~L~Ls~N~l~ 313 (958)
...|..++.+.-.....|.++++...... | ..+..+..=..+.+...+..|.. ..+++|+.|+|++|+|+
T Consensus 208 wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~ 287 (498)
T KOG4237|consen 208 WLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT 287 (498)
T ss_pred hhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc
Confidence 12344455666666666777777766553 3 33333322223333344455543 45689999999999999
Q ss_pred CccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCC
Q 002158 314 GSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSA 391 (958)
Q Consensus 314 ~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~ 391 (958)
++.+.+|.++..|++|.|..|+|. .+....|+. ...|++|+|.+|+|+.+.... .+..|.+|+|-+|||.|+|
T Consensus 288 ~i~~~aFe~~a~l~eL~L~~N~l~-~v~~~~f~~----ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 288 RIEDGAFEGAAELQELYLTRNKLE-FVSSGMFQG----LSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred hhhhhhhcchhhhhhhhcCcchHH-HHHHHhhhc----cccceeeeecCCeeEEEecccccccceeeeeehccCcccCcc
Confidence 999999999999999999999998 555555543 235678999999999987654 8889999999999999999
Q ss_pred CCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCCCceeeeeceee
Q 002158 392 NIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPEPCFCAAPLRIG 447 (958)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~~~~c~sp~~~~ 447 (958)
.+.|...|+.++. ..||| .|+.-.+..-+....+.-+.-+|+.|.+.+
T Consensus 363 ~l~wl~~Wlr~~~-----~~~~~---~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~ 410 (498)
T KOG4237|consen 363 RLAWLGEWLRKKS-----VVGNP---RCQSPGFVRQIPISDVAFGDFRCGGPEELG 410 (498)
T ss_pred chHHHHHHHhhCC-----CCCCC---CCCCCchhccccchhccccccccCCccccC
Confidence 9999999987655 23433 355444444443333333346677776544
No 445
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=7.5e-17 Score=166.33 Aligned_cols=130 Identities=21% Similarity=0.314 Sum_probs=107.6
Q ss_pred eeeeeCCeEEEEEEECCCcEEEEEEeccCCh--------hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 632 QVGQGGYGKVYKGILSDNTTVAIKRAEEGSL--------QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.||+|+||+||+|.+ ++..|++|+...... ....++.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999986 678899998654211 11256788999999999887666555666667789999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
+|++|.+++.... . .++.+++.+|.++|+.+ ++|||++|+||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999885421 1 78999999999999999 99999999999999 89999999999874
No 446
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=1e-18 Score=194.59 Aligned_cols=263 Identities=24% Similarity=0.255 Sum_probs=181.1
Q ss_pred CCCccccCCCCCcEEEeeCCCCCCC----CChhhcCCCCCCEEecccccccc------cCccccccccccceEecccccc
Q 002158 124 TIPKEIGNISSLIFLLLNGNKLSGS----LPDELGYLSNLNRLQVDENNITG------TIPKSFANLSRVRHLHLNNNSI 193 (958)
Q Consensus 124 ~ip~~i~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~L~~L~Ls~N~l 193 (958)
..+..+..+.+|++|+|+++.++.. ++..+...++|++|+++++.+.+ .++..+..+++|+.|+|++|.+
T Consensus 14 ~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 93 (319)
T cd00116 14 RATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNAL 93 (319)
T ss_pred chHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCC
Confidence 3445566777899999999998542 55567778889999999988762 2345677788999999999998
Q ss_pred cccCchhhcCCcc---chhhhccCCcccc----CCCcccCCC-CCccEEEccCCCCCCC---CccccccCCCCCCEEEcc
Q 002158 194 GGQIPSELSKLST---LIHLLVDNNNLSG----NLPPELSEL-PQLCILQLDNNNFSAS---EIPATYGNFSKLVKLSLR 262 (958)
Q Consensus 194 ~~~~p~~l~~l~~---L~~L~L~~N~l~~----~~~~~l~~l-~~L~~L~L~~N~l~~~---~~p~~~~~l~~L~~L~L~ 262 (958)
.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.++.. .+...+..+.+|++|+|+
T Consensus 94 ~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~ 173 (319)
T cd00116 94 GPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLA 173 (319)
T ss_pred ChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECc
Confidence 8666666655555 9999999998873 233455666 8889999999988732 234456677789999999
Q ss_pred cCCCCCCCC-----CCCCCCCcCEEeccCCcCCCcCC-----CCCCCCCcCEEEccCCcCCCccchhccC-----CCCCC
Q 002158 263 NCNLQGAVP-----DLSRIPNLYYLDLSWNHLTGSIP-----SKKLSENVTTIDLSDNYLNGSILESISN-----LPFLQ 327 (958)
Q Consensus 263 ~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~~~~~-----~~~~~~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~ 327 (958)
+|.+++... .+..+++|+.|+|++|.+++... ....+++|++|++++|.+++.....+.. .+.|+
T Consensus 174 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~ 253 (319)
T cd00116 174 NNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLL 253 (319)
T ss_pred CCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCce
Confidence 888875221 24556788889998888864221 1233478888888888887644444332 37888
Q ss_pred eEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCcc-----CC-CC-CCcceEEeCCCCC
Q 002158 328 TLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVG-----DL-TL-PNNVTLRLGGNPI 387 (958)
Q Consensus 328 ~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~-----~~-~l-~~L~~L~l~~N~l 387 (958)
.|++++|.++......+...... .+.++.+|+++|.++.-.. .. .. +.|+.||+.+|||
T Consensus 254 ~L~l~~n~i~~~~~~~l~~~~~~-~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 254 TLSLSCNDITDDGAKDLAEVLAE-KESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred EEEccCCCCCcHHHHHHHHHHhc-CCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 88888888873322222221111 1567788888888886422 11 33 6788888888876
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.2e-16 Score=164.53 Aligned_cols=143 Identities=19% Similarity=0.181 Sum_probs=112.0
Q ss_pred HHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChh----------------------cHHHHHHHHHHHH
Q 002158 619 ELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ----------------------GQNEFLTEIKLLS 676 (958)
Q Consensus 619 el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 676 (958)
++......|...+.||+|+||.||+|..++|+.||||++...... ....+..|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 343334447778899999999999999888999999987543200 1123678899999
Q ss_pred ccCCC--CcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCc
Q 002158 677 RLHHR--NLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKA 754 (958)
Q Consensus 677 ~l~H~--niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp 754 (958)
.+.|+ .+.+.++. ...++||||+++++|.+.... .....++.+++.++.++|+.+ |+||||||
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p 153 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG---IIHGDLSE 153 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCc
Confidence 99887 44555542 356899999999999776431 234678899999999999998 99999999
Q ss_pred cceEecCCCCeEEeeeeeeccc
Q 002158 755 SNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 755 ~NILl~~~~~~kl~DFGla~~~ 776 (958)
+||++++++.++|+|||++...
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred ccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999998643
No 448
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=8.5e-17 Score=169.15 Aligned_cols=141 Identities=18% Similarity=0.169 Sum_probs=110.4
Q ss_pred CCCCCceeeeeCCeEEEEEE--ECCCcEEEEEEeccCChh------------------------cHHHHHHHHHHHHccC
Q 002158 626 YFSSSTQVGQGGYGKVYKGI--LSDNTTVAIKRAEEGSLQ------------------------GQNEFLTEIKLLSRLH 679 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 679 (958)
.|.+.+.||+|+||.||+|. ..+|+.||||+++..... ....+..|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36677899999999999998 458999999988753210 0123568999999997
Q ss_pred CC--CcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccce
Q 002158 680 HR--NLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNI 757 (958)
Q Consensus 680 H~--niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NI 757 (958)
+. .+.+++++ ...++||||+++++|..+.... ..+...+...++.|++.++++||+.+. |+||||||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~--iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGE--LVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCC--EEeCCCChhhE
Confidence 53 34455543 2358999999998887765322 235666778999999999999998874 99999999999
Q ss_pred EecCCCCeEEeeeeeecc
Q 002158 758 LLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 758 Ll~~~~~~kl~DFGla~~ 775 (958)
+++ ++.++|+|||.+..
T Consensus 181 li~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EEE-CCCEEEEEChhhhc
Confidence 999 88999999999874
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=7.6e-17 Score=191.16 Aligned_cols=145 Identities=19% Similarity=0.280 Sum_probs=116.4
Q ss_pred hHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEE-eccC-Ch------hcHHHHHHHHHHHHccCCCCcceEEE
Q 002158 617 FKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKR-AEEG-SL------QGQNEFLTEIKLLSRLHHRNLVSLLG 688 (958)
Q Consensus 617 ~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~-~~------~~~~~~~~E~~~l~~l~H~niv~l~~ 688 (958)
+.........|...+.||+|+||+||+|.+.+.. +++|+ .... .. ...+++.+|++++++++|++++....
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 403 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVI 403 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEE
Confidence 3333444455567889999999999999885443 44443 2211 11 12356889999999999999998888
Q ss_pred EEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEe
Q 002158 689 YCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 689 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
++......++||||+++++|.+++. ....++.+++++|.|||+.+ ++||||||+|||+ +++.++|+
T Consensus 404 ~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~li 469 (535)
T PRK09605 404 YDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLI 469 (535)
T ss_pred EEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEE
Confidence 8888778899999999999999885 35678999999999999999 9999999999999 67899999
Q ss_pred eeeeeccc
Q 002158 769 DFGLSRLA 776 (958)
Q Consensus 769 DFGla~~~ 776 (958)
|||+++..
T Consensus 470 DFGla~~~ 477 (535)
T PRK09605 470 DFGLGKYS 477 (535)
T ss_pred eCcccccC
Confidence 99998753
No 450
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.68 E-value=2.2e-17 Score=180.95 Aligned_cols=177 Identities=29% Similarity=0.426 Sum_probs=130.5
Q ss_pred CeEEEEEEecCCCCHHHHhcc-CCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSG-RTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
...|+.|++|...+|.+||.. +.....++.....++.|++.|++| ++ .+|||+||.||+...+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhh
Confidence 357899999999999999974 345568889999999999999999 67 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
....+... ....+....+...||..||+||.+.+..|+.|+||||+|++|+|++. +|.....-.....
T Consensus 403 ~ts~~~~~-~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~-------- 470 (516)
T KOG1033|consen 403 VTSQDKDE-TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQFERIATLT-------- 470 (516)
T ss_pred eeecccCC-cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHHHHHHhhh--------
Confidence 87654433 11112223445679999999999999999999999999999999998 2221111001000
Q ss_pred hhhhcccCCCCChHH---HHHHHHHHHHccccCCCCCCCHHHH
Q 002158 853 FSIIDNRMGSYPSEC---VERFVTLALRCCHDKPEHRPSMSDV 892 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~---~~~l~~li~~cl~~dP~~RPs~~ev 892 (958)
++-+ +.+|+.. .+.=+.++.+++.+.|.+||++.++
T Consensus 471 -d~r~---g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 471 -DIRD---GIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred -hhhc---CCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 0111 1222111 1223578899999999999955443
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.65 E-value=9.7e-17 Score=187.34 Aligned_cols=215 Identities=23% Similarity=0.290 Sum_probs=146.1
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
...+|+.++.|..|+||.||..+++ ..+.+|+|+-+... - .+- ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-i-----lRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-I-----LRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcccccch-h-----hhc--cccccCCccee-----------------
Confidence 3457888899999999999999987 36678884433211 0 010 22222333333
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+-.+.++.-+. ++.. ++.+++|+|+.+ |+|||+||+|.+|+.-|.+|+.|||+++..-..-.
T Consensus 136 ----gDc~tllk~~g~--lPvd--------mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ----GDCATLLKNIGP--LPVD--------MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ----chhhhhcccCCC--Ccch--------hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 444455543222 3322 278999999999 99999999999999999999999999875311100
Q ss_pred C--------CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 782 E--------GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 782 ~--------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
. .....-....++||+.|+|||++....|...+|.|++|+++||.+.|+.||+++....-.-....+...+
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w- 277 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW- 277 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc-
Confidence 0 0000112345689999999999999999999999999999999999999998654322111112211111
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCC
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRP 887 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 887 (958)
.+-....+.+..+++.+.++.+|..|-
T Consensus 278 -------pE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 278 -------PEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred -------cccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 112334567888999999999999993
No 452
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=1.8e-15 Score=148.16 Aligned_cols=135 Identities=19% Similarity=0.191 Sum_probs=114.9
Q ss_pred CCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCC--CCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 629 SSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHH--RNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++++++++...++..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35679999999999999854 7899999876443 4578899999999976 58999999998888999999999887
Q ss_pred CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 707 TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.+..+ +......++.+++++++++|....++++|+|++|+||++++.+.++++|||.++.
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77554 4456678899999999999986545599999999999999989999999998864
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=6.2e-15 Score=150.39 Aligned_cols=135 Identities=20% Similarity=0.235 Sum_probs=98.8
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChh--cHHHH----------------------HHHHHHHHccCCC--Cc
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ--GQNEF----------------------LTEIKLLSRLHHR--NL 683 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~E~~~l~~l~H~--ni 683 (958)
.+.||+|+||+||+|...+++.||||++...... ....+ ..|.+.+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999988653211 11111 3566666666543 34
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCHHH-HhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecC
Q 002158 684 VSLLGYCDEEGEQMLVYEFVPNGTLRD-WLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDS 761 (958)
Q Consensus 684 v~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~ 761 (958)
.+.+++ ...++||||++++.+.. .+.... .. .++..++.+++.++.++|. .+ |+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence 555543 24689999999854321 111111 11 5678899999999999999 88 99999999999999
Q ss_pred CCCeEEeeeeeeccc
Q 002158 762 NLNAKVADFGLSRLA 776 (958)
Q Consensus 762 ~~~~kl~DFGla~~~ 776 (958)
++.++|+|||.+...
T Consensus 150 ~~~~~liDfg~a~~~ 164 (187)
T cd05119 150 DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCcEEEEECcccccc
Confidence 899999999998643
No 454
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=1.5e-14 Score=152.56 Aligned_cols=135 Identities=21% Similarity=0.229 Sum_probs=106.4
Q ss_pred Cceee-eeCCeEEEEEEECCCcEEEEEEeccCC-------------hhcHHHHHHHHHHHHccCCCCc--ceEEEEEEeC
Q 002158 630 STQVG-QGGYGKVYKGILSDNTTVAIKRAEEGS-------------LQGQNEFLTEIKLLSRLHHRNL--VSLLGYCDEE 693 (958)
Q Consensus 630 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~ 693 (958)
...|| .||.|+||++... +..++||.+.... .....++.+|++++.+++|+++ ++.+++...+
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35788 8999999999874 7789999875421 1223467899999999998875 7777775433
Q ss_pred C----eEEEEEEecCC-CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEe
Q 002158 694 G----EQMLVYEFVPN-GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 694 ~----~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
. ..++||||+++ .+|.+++... .++.. .+.+++.++.+||+.| |+||||||+|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 6999998643 24433 3568999999999999 9999999999999999999999
Q ss_pred eeeeecc
Q 002158 769 DFGLSRL 775 (958)
Q Consensus 769 DFGla~~ 775 (958)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998864
No 455
>PLN03150 hypothetical protein; Provisional
Probab=99.58 E-value=8.7e-15 Score=175.31 Aligned_cols=159 Identities=30% Similarity=0.524 Sum_probs=105.1
Q ss_pred cCCCCHhHHHHHHHHHHHcccCccccCCCCCCCCCC---CCCCceeeCccccCCCceeeEEEEccCCcCCCCccccccCC
Q 002158 33 AQTTDPQEASALRAIKNSLVDSMNHLRNWNKGDPCM---SNWTGVLCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQL 109 (958)
Q Consensus 33 ~~~~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~---~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L 109 (958)
...+.++|+.||+++|+++.++.. .+|++ ++|+ +.|.||.|.... ......++.|+|.++++.|.+|+.+
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~~~~~--~~W~g-~~C~p~~~~w~Gv~C~~~~-~~~~~~v~~L~L~~n~L~g~ip~~i--- 438 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLGLPLR--FGWNG-DPCVPQQHPWSGADCQFDS-TKGKWFIDGLGLDNQGLRGFIPNDI--- 438 (623)
T ss_pred ccccCchHHHHHHHHHHhcCCccc--CCCCC-CCCCCcccccccceeeccC-CCCceEEEEEECCCCCccccCCHHH---
Confidence 345678999999999999976532 48975 6774 369999995321 1223468888888887776665554
Q ss_pred CCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecc
Q 002158 110 SRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLN 189 (958)
Q Consensus 110 ~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 189 (958)
+++++|+.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++++++|+.|+|+
T Consensus 439 --------------------~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 439 --------------------SKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred --------------------hCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 445555556666666666666666666666666666666666666666666666666666
Q ss_pred cccccccCchhhcCC-ccchhhhccCCccc
Q 002158 190 NNSIGGQIPSELSKL-STLIHLLVDNNNLS 218 (958)
Q Consensus 190 ~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~ 218 (958)
+|+++|.+|..+..+ .++..+++.+|...
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccc
Confidence 666666666665543 34556666666543
No 456
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=3.1e-13 Score=154.92 Aligned_cols=140 Identities=21% Similarity=0.210 Sum_probs=101.0
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcH----------------------------------------HHHH
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQ----------------------------------------NEFL 669 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 669 (958)
.+.||+|++|.||+|++++|+.||||+.+....... -+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999865421110 1255
Q ss_pred HHHHHHHccC----CCCcceEEEEE-EeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHH-HHHHhhhcC
Q 002158 670 TEIKLLSRLH----HRNLVSLLGYC-DEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAK-GILYLHTEA 743 (958)
Q Consensus 670 ~E~~~l~~l~----H~niv~l~~~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-aL~yLH~~~ 743 (958)
+|++.+.+++ |.+-+.+-.++ ...+..+|||||++|++|.++....... . .+.+++.++++ .+..+|..|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG-L---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC-C---CHHHHHHHHHHHHHHHHHhCC
Confidence 5666666652 33323332332 2244679999999999998887532111 2 23456666666 478899988
Q ss_pred CCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 744 HPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 744 ~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++|+|+||.||++++++.++++|||++..+
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 999999999999999999999999998755
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=1.2e-14 Score=171.41 Aligned_cols=254 Identities=24% Similarity=0.270 Sum_probs=187.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC--CcEEEEEEeccCC--hhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD--NTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV 699 (958)
..|...+.||+|+|+.|-...... ...+|+|.+.... ....+....|..+=..+. |+|++.+++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 345566779999999998887643 4456666655432 222233445777777776 99999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhh-hcCCCCeeccCCCccceEecCCC-CeEEeeeeeecccc
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLH-TEAHPPVFHRDIKASNILLDSNL-NAKVADFGLSRLAP 777 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH-~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~~ 777 (958)
+||..++++.+-+........+....-.+..|+..++.|+| ..+ +.||||||+|.+++..+ ..+++|||+|..+.
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999999883222223666777889999999999999 888 99999999999999999 99999999998775
Q ss_pred cCCCCCCccceeeeeccC-CCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 778 VLDDEGTMPTHVSTIVKG-TPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
..... ........| ++.|+|||...+. ......|+||.|+++.-+++|..||........ .....
T Consensus 177 ~~~g~----~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---------~~~~~ 243 (601)
T KOG0590|consen 177 NKNGA----ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---------RYSSW 243 (601)
T ss_pred ccCCc----ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---------cceee
Confidence 42111 223344567 9999999999885 445689999999999999999999975432211 11111
Q ss_pred hccc-C--CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 856 IDNR-M--GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 856 i~~~-~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
+... . ............++..+++..+|..|.+.+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 244 KSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccccccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 1111 0 1122344566778888999999999999888764
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.39 E-value=2.4e-14 Score=156.94 Aligned_cols=184 Identities=28% Similarity=0.440 Sum_probs=140.0
Q ss_pred CCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEE
Q 002158 156 LSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQ 235 (958)
Q Consensus 156 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 235 (958)
|+--...||+.|++. .+|..+..+..|+.+.|.+|.|. .+|..+.++..|++|+|+.|+++ .+|..+..|+ |+.|.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 444556677777777 67777777777777777777777 67777788888888888888877 5566666554 77888
Q ss_pred ccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCc
Q 002158 236 LDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGS 315 (958)
Q Consensus 236 L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~ 315 (958)
+++|+++ .+|..++.+..|..|+.+.|.+...++.+.++.+|+.|.+..|++. .+|.....-.|..||+|.|+++ .
T Consensus 150 ~sNNkl~--~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 150 VSNNKLT--SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLIRLDFSCNKIS-Y 225 (722)
T ss_pred EecCccc--cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCceeeeecccCcee-e
Confidence 8888885 5677777777788888888888877777888888888888888887 3443333557888888888887 7
Q ss_pred cchhccCCCCCCeEeeecccCCCccchhhhccc
Q 002158 316 ILESISNLPFLQTLSLENNFLTGSIPATIWQNK 348 (958)
Q Consensus 316 ~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~ 348 (958)
+|..|.+|..|++|-|.+|+|+ +-|..++...
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kG 257 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKG 257 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC-CChHHHHhcc
Confidence 8889999999999999999998 7777776543
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.35 E-value=1.2e-12 Score=150.29 Aligned_cols=200 Identities=36% Similarity=0.443 Sum_probs=147.6
Q ss_pred EEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCcccccccc-ccceEecccccccccCchhhcCCccchhhhccCC
Q 002158 137 FLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLS-RVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNN 215 (958)
Q Consensus 137 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 215 (958)
.|+++.|.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5778888775 33344666778888888888888 5666666664 8888888888888 56666788888888888888
Q ss_pred ccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCC
Q 002158 216 NLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPS 295 (958)
Q Consensus 216 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~ 295 (958)
+++ .++.....+++|+.|++++|+++ .+|........|++|.+++|.+...+..+..+.++..|.+.+|++...+..
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~--~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~ 250 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS--DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPES 250 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc--cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeeccch
Confidence 887 45555557788888888888885 566665566668888888886655666677788888888888887643444
Q ss_pred CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhh
Q 002158 296 KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATI 344 (958)
Q Consensus 296 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l 344 (958)
...+.+|+.|++++|+++.... ++.+.+|+.|++++|.++...|...
T Consensus 251 ~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 251 IGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hccccccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 4556678888888888876555 7788888888888888876555544
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.34 E-value=1.5e-12 Score=149.24 Aligned_cols=187 Identities=33% Similarity=0.499 Sum_probs=104.2
Q ss_pred ccccCCCCCcEEEeeCCCCCCCCChhhcCCC-CCCEEecccccccccCccccccccccceEecccccccccCchhhcCCc
Q 002158 127 KEIGNISSLIFLLLNGNKLSGSLPDELGYLS-NLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLS 205 (958)
Q Consensus 127 ~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 205 (958)
..+..++.++.|++.+|.++ .+|.....+. +|++|++++|++. .+|..+..+++|+.|++++|+++ .+|.....++
T Consensus 110 ~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~ 186 (394)
T COG4886 110 SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLS 186 (394)
T ss_pred hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhh
Confidence 33444455666666666665 5555555553 5666666666655 44445555666666666666665 4444444555
Q ss_pred cchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEecc
Q 002158 206 TLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLS 285 (958)
Q Consensus 206 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls 285 (958)
+|+.|++++|+++ .+|.....+..|++|.+++|++ ...+..+.++.++..|.+.+|++...+..+..+++|++|+++
T Consensus 187 ~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~--~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s 263 (394)
T COG4886 187 NLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSI--IELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLS 263 (394)
T ss_pred hhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcc--eecchhhhhcccccccccCCceeeeccchhccccccceeccc
Confidence 6666666666665 3444433444466666666643 234555556666666666666665444445556666666666
Q ss_pred CCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhc
Q 002158 286 WNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESI 320 (958)
Q Consensus 286 ~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 320 (958)
+|.++ .++......+|+.|++++|.++...+...
T Consensus 264 ~n~i~-~i~~~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 264 NNQIS-SISSLGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred ccccc-ccccccccCccCEEeccCccccccchhhh
Confidence 66665 34434445666666666666655444443
No 461
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.31 E-value=2.6e-13 Score=144.90 Aligned_cols=234 Identities=20% Similarity=0.170 Sum_probs=125.7
Q ss_pred cCCCCCCEEecccccccccCc--cccccccccceEeccccccccc--CchhhcCCccchhhhccCCccccCCCcc-cCCC
Q 002158 154 GYLSNLNRLQVDENNITGTIP--KSFANLSRVRHLHLNNNSIGGQ--IPSELSKLSTLIHLLVDNNNLSGNLPPE-LSEL 228 (958)
Q Consensus 154 ~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~~~~-l~~l 228 (958)
+++.+|++..|.+..+. ..+ .....+++++.|||++|-|... +-.....+++|+.|+|+.|++....... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 34667777777777665 222 3455677777777777777622 2234566777777777777776322211 1234
Q ss_pred CCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCC-CCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEc
Q 002158 229 PQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAV-PDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDL 307 (958)
Q Consensus 229 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L 307 (958)
+.|+.|.|+.|.+++..+......+++|+.|+|..|...... ....-+..|+.|||++|++-. .+
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~------------- 262 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FD------------- 262 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cc-------------
Confidence 666666666666665444445555566666666666321111 123344455555555555542 11
Q ss_pred cCCcCCCccchhccCCCCCCeEeeecccCCC-ccchhhhcccccCccccceEeccCCCCCCCccC---CCCCCcceEEeC
Q 002158 308 SDNYLNGSILESISNLPFLQTLSLENNFLTG-SIPATIWQNKSFSTKARLKIDLRNNSFSNIVGD---LTLPNNVTLRLG 383 (958)
Q Consensus 308 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~---~~l~~L~~L~l~ 383 (958)
.-...+.++.|+.|+++.|.+.. .+|+.=...+.-..++++.|+++.|+|.+++.. ..+++|+.|.+.
T Consensus 263 --------~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~ 334 (505)
T KOG3207|consen 263 --------QGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRIT 334 (505)
T ss_pred --------cccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcc
Confidence 11223344444444444444442 122221111222344556666666666554433 278889999999
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCccccc
Q 002158 384 GNPICTSANIPNTGRFCGSDAGGDETLTN 412 (958)
Q Consensus 384 ~N~l~~~~~~~~~~~~~~~~~~~~~~L~~ 412 (958)
+|++..... .......+...+...|++
T Consensus 335 ~n~ln~e~~--~a~~~VIAr~~~l~~LN~ 361 (505)
T KOG3207|consen 335 LNYLNKETD--TAKLLVIARISQLVKLND 361 (505)
T ss_pred ccccccccc--ceeEEeeeehhhhhhhcc
Confidence 999976554 222334455555566653
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=1.9e-12 Score=133.33 Aligned_cols=206 Identities=21% Similarity=0.368 Sum_probs=141.0
Q ss_pred HHHHHccCCCCcceEEEEEEeCC-----eEEEEEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCC
Q 002158 672 IKLLSRLHHRNLVSLLGYCDEEG-----EQMLVYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAH 744 (958)
Q Consensus 672 ~~~l~~l~H~niv~l~~~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~ 744 (958)
..-+-++-|.|||+++.|+.+.. ...++.|||.-|++..+|++.. ...+....-.+|+.||..||.|||+..
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~- 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD- 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-
Confidence 34455667999999999986543 5789999999999999997532 344777777899999999999999874
Q ss_pred CCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHH
Q 002158 745 PPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLL 824 (958)
Q Consensus 745 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ 824 (958)
|+|+|+++..+-|++..+|-+|++--.-....+.... .. ........|-++|.|||+-.....+..+|||+||+..+
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~--~~-~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNS--TR-EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCAL 273 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhh--hh-HhhhhccccCCccccCCcCcccccccchhhhhhhHHHH
Confidence 8999999999999999999888752111111000000 00 01112234678999999887777788999999999999
Q ss_pred HHHhCCCCCCCCch-hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 825 ELLTGMQPISHGKN-IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 825 elltG~~P~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
||..|..--..+.. ...+.... ...... .+ ..=...+.+|++..|..||+|.+++.+
T Consensus 274 emailEiq~tnseS~~~~ee~ia---~~i~~l-en----------~lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 274 EMAILEIQSTNSESKVEVEENIA---NVIIGL-EN----------GLQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HHHHheeccCCCcceeehhhhhh---hheeec-cC----------ccccCcCcccccCCCCCCcchhhhhcC
Confidence 99988654322221 11110000 000000 00 111356789999999999999988754
No 463
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.29 E-value=1.5e-13 Score=150.79 Aligned_cols=169 Identities=25% Similarity=0.417 Sum_probs=87.3
Q ss_pred eeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccc
Q 002158 114 YYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSI 193 (958)
Q Consensus 114 ~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 193 (958)
..+++.|...++|..+..+..|+.|.|..|.+. .+|..+.+|..|++|||+.|+++ .+|..+..|+ |+.|.+++|++
T Consensus 79 ~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl 155 (722)
T KOG0532|consen 79 FADLSRNRFSELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKL 155 (722)
T ss_pred hhhccccccccCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCcc
Confidence 334444555555555555555555555555555 55555555555555555555555 4444444432 55555555555
Q ss_pred cccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCC
Q 002158 194 GGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDL 273 (958)
Q Consensus 194 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l 273 (958)
+ .+|..++.+..|..|+.+.|++. .+|..+.++.+|+.|.+..|++. .+|..+.. -.|..||++.|++..++-.|
T Consensus 156 ~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~--~lp~El~~-LpLi~lDfScNkis~iPv~f 230 (722)
T KOG0532|consen 156 T-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE--DLPEELCS-LPLIRLDFSCNKISYLPVDF 230 (722)
T ss_pred c-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh--hCCHHHhC-CceeeeecccCceeecchhh
Confidence 5 44555555555555555555554 34445555555555555555552 34444442 23555555555555444455
Q ss_pred CCCCCcCEEeccCCcCC
Q 002158 274 SRIPNLYYLDLSWNHLT 290 (958)
Q Consensus 274 ~~l~~L~~L~Ls~N~l~ 290 (958)
.+|+.|++|-|.+|.|.
T Consensus 231 r~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 231 RKMRHLQVLQLENNPLQ 247 (722)
T ss_pred hhhhhheeeeeccCCCC
Confidence 55555555555555554
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.29 E-value=8.7e-12 Score=124.90 Aligned_cols=130 Identities=17% Similarity=0.116 Sum_probs=97.5
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcc-eEEEEEEeCCeEEEEEEecCCCCH
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLV-SLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
.+.|+.|.++.||++... ++.|++|....... ....+..|+.+++.+.+.+++ +++.+.. +..++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 356899999999999874 77899999765432 223467899999998665544 4554433 345899999999887
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcC--CCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEA--HPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
.+.- . ....++.+++++|+.||+.+ ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 6530 1 11245678999999999887 22359999999999999 6789999999875
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=4.4e-12 Score=142.68 Aligned_cols=251 Identities=22% Similarity=0.241 Sum_probs=181.9
Q ss_pred CCCCCceeee--eCCeEEEEEEE--C-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEE
Q 002158 626 YFSSSTQVGQ--GGYGKVYKGIL--S-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 626 ~~~~~~~lg~--G~~g~Vy~~~~--~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 697 (958)
.|.....+|. |.+|.||.+.. . ++..+|+|+-+.. ......+=.+|+...+.++ |+|.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566778999 99999999986 3 6888999974432 2233334457888888884 999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHH----HHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeee
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAK----GILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGL 772 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGl 772 (958)
+-+|++ +.+|.++.+.... .++......+..+..+ |+.++|+.. ++|-|+||.||+...+ ...+++|||+
T Consensus 195 iqtE~~-~~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeeccc-cchhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcce
Confidence 999999 5788888865432 2666777778888888 999999999 9999999999999999 8899999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
.......+-... ........|...|++||... .-++..+|+|++|.++.|..++..+...+... .|.. . +...+
T Consensus 270 v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-~W~~-~-r~~~i 343 (524)
T KOG0601|consen 270 VSKISDGNFSSV--FKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS-SWSQ-L-RQGYI 343 (524)
T ss_pred eEEccCCccccc--eeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC-Cccc-c-ccccC
Confidence 886643321111 11222335788899999874 45788999999999999999988776544211 0100 0 00000
Q ss_pred hhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 853 FSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
. .++...-...+...+..+++.+|..|++.+.+..
T Consensus 344 p-------~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 344 P-------LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred c-------hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 0111112234455888999999999999888765
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.26 E-value=2.6e-11 Score=140.39 Aligned_cols=142 Identities=17% Similarity=0.165 Sum_probs=96.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccCChhc----------------------------------H----
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQG----------------------------------Q---- 665 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~---- 665 (958)
..|+. +.||+|++|.||+|++++ |+.||||+.+...... .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45666 789999999999999987 9999999987542100 0
Q ss_pred --HHHHHHHHHHHccC----CCCcceEEEEEEe-CCeEEEEEEecCCCCHHHH--hccCCC--CCchHHHHHHHHHHHHH
Q 002158 666 --NEFLTEIKLLSRLH----HRNLVSLLGYCDE-EGEQMLVYEFVPNGTLRDW--LSGRTK--ENLNFAMRLRVALDSAK 734 (958)
Q Consensus 666 --~~~~~E~~~l~~l~----H~niv~l~~~~~~-~~~~~lV~E~~~~gsL~~~--l~~~~~--~~l~~~~~~~i~~~ia~ 734 (958)
-+|.+|+..+.+++ +...+.+-.++.+ ....+|||||++|+.+.++ +...+. ..+....+..++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q--- 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ--- 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 12455655555552 4444444343322 4567899999999999875 322211 11333333333333
Q ss_pred HHHHhhhcCCCCeeccCCCccceEecCCC----CeEEeeeeeecccc
Q 002158 735 GILYLHTEAHPPVFHRDIKASNILLDSNL----NAKVADFGLSRLAP 777 (958)
Q Consensus 735 aL~yLH~~~~~~iiH~Dikp~NILl~~~~----~~kl~DFGla~~~~ 777 (958)
++..| ++|+|+||.||+++.++ .+++.|||++..++
T Consensus 276 ----if~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 276 ----VFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ----HHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 34577 99999999999999988 99999999997653
No 467
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=2.1e-12 Score=138.11 Aligned_cols=208 Identities=21% Similarity=0.228 Sum_probs=103.9
Q ss_pred CCCCcceeeccCcccCCCCc--cccCCCCCcEEEeeCCCCCCCC--ChhhcCCCCCCEEecccccccccCccc-cccccc
Q 002158 108 QLSRLQYYFMWNDLTGTIPK--EIGNISSLIFLLLNGNKLSGSL--PDELGYLSNLNRLQVDENNITGTIPKS-FANLSR 182 (958)
Q Consensus 108 ~L~~L~~L~l~n~~~~~ip~--~i~~l~~L~~L~Ls~n~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~ 182 (958)
++.+|+...+.|...+..+. ....|++++.||||.|-|.... -.-...|++|+.|+|+.|++....... -..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 45555555666655554442 4555666666666666655321 122345666666666666665222111 123456
Q ss_pred cceEeccccccc-ccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEc
Q 002158 183 VRHLHLNNNSIG-GQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSL 261 (958)
Q Consensus 183 L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L 261 (958)
|+.|.|+.|.|+ ..+...+..+|+|+.|+|..|..-........-+..|+.|||++|++.....-...+.++.|+.|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 666666666665 1122233455666666666664222222333344556666666665532221234455555555555
Q ss_pred ccCCCCCCCC-C------CCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecc
Q 002158 262 RNCNLQGAVP-D------LSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENN 334 (958)
Q Consensus 262 ~~N~l~~~~~-~------l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 334 (958)
+.|.+..+.. + ...+++|++|+++.|++. .. .....+..+++|+.|.+..|
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w---------------------~sl~~l~~l~nlk~l~~~~n 336 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DW---------------------RSLNHLRTLENLKHLRITLN 336 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccc-cc---------------------cccchhhccchhhhhhcccc
Confidence 5555554321 1 133444555555555443 11 12233444566666666666
Q ss_pred cCC
Q 002158 335 FLT 337 (958)
Q Consensus 335 ~l~ 337 (958)
.|+
T Consensus 337 ~ln 339 (505)
T KOG3207|consen 337 YLN 339 (505)
T ss_pred ccc
Confidence 665
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.22 E-value=1.5e-12 Score=132.21 Aligned_cols=125 Identities=26% Similarity=0.302 Sum_probs=72.5
Q ss_pred CCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecc
Q 002158 255 KLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENN 334 (958)
Q Consensus 255 ~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 334 (958)
.|++|+|++|.|+.+.....-+++++.|++|+|.|. .+.....+.+|+.||||+|.++ ....+-..|-+.+.|.|++|
T Consensus 285 ~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N 362 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIR-TVQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQN 362 (490)
T ss_pred hhhhccccccchhhhhhhhhhccceeEEecccccee-eehhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhh
Confidence 344455555555444444444455555555555554 4444455555555555555554 23333345566666666666
Q ss_pred cCCCccchhhhcccccCccccceEeccCCCCCCCccCC---CCCCcceEEeCCCCCC
Q 002158 335 FLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL---TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 335 ~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~---~l~~L~~L~l~~N~l~ 388 (958)
.|. ++.++..+. +|..||+++|+|.++.+-. .+|-|..|.|.|||+.
T Consensus 363 ~iE-----~LSGL~KLY--SLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 363 KIE-----TLSGLRKLY--SLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hHh-----hhhhhHhhh--hheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 664 222222222 4557888888887766543 8899999999999994
No 469
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.22 E-value=1.5e-10 Score=131.23 Aligned_cols=165 Identities=20% Similarity=0.245 Sum_probs=126.7
Q ss_pred CCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHH
Q 002158 647 SDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRL 726 (958)
Q Consensus 647 ~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~ 726 (958)
.++.+|.|...+...........+-++-|+.++||||+++++..+.++..|+|+|-+ ..|..++++. ......
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l-----~~~~v~ 107 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL-----GKEEVC 107 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh-----HHHHHH
Confidence 378899999887755433345667888999999999999999999999999999998 4688888653 356677
Q ss_pred HHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhc
Q 002158 727 RVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL 806 (958)
Q Consensus 727 ~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 806 (958)
.-+.||+.||.+||+.++ ++|++|.-+-|++++.|..||++|-++...+.... +. ....--..|..|+.+.
T Consensus 108 ~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~----~~---~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA----PA---KSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc----cc---ccchhhhcccChhhcC
Confidence 788999999999997765 99999999999999999999999999865422111 00 0011112356666542
Q ss_pred cCCCCCcchhhhHHHHHHHHHhC
Q 002158 807 THKLTDKSDVYSLGVVLLELLTG 829 (958)
Q Consensus 807 ~~~~~~~~DV~S~Gv~l~elltG 829 (958)
... -..|.|.||++++|++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 222 356999999999999999
No 470
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.21 E-value=2.1e-12 Score=134.70 Aligned_cols=242 Identities=20% Similarity=0.279 Sum_probs=135.4
Q ss_pred cccCCCCCcEEEeeCCCCCC----CCChhhcCCCCCCEEeccccc---ccccCccc-------cccccccceEecccccc
Q 002158 128 EIGNISSLIFLLLNGNKLSG----SLPDELGYLSNLNRLQVDENN---ITGTIPKS-------FANLSRVRHLHLNNNSI 193 (958)
Q Consensus 128 ~i~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~L~~N~---l~~~~p~~-------~~~l~~L~~L~Ls~N~l 193 (958)
.+..+.++++|+||+|.+.. .+-..+.+.++|+..++++-- +...+|.. +...++|++||||+|-|
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 34556677777777777753 233446666777777776532 22233333 34456788888888887
Q ss_pred cccCchh----hcCCccchhhhccCCccccCCCcc-------------cCCCCCccEEEccCCCCCCC---CccccccCC
Q 002158 194 GGQIPSE----LSKLSTLIHLLVDNNNLSGNLPPE-------------LSELPQLCILQLDNNNFSAS---EIPATYGNF 253 (958)
Q Consensus 194 ~~~~p~~----l~~l~~L~~L~L~~N~l~~~~~~~-------------l~~l~~L~~L~L~~N~l~~~---~~p~~~~~l 253 (958)
....+.. +.++..|++|.|.+|.+....... .+.-+.|++++.++|++-.. .+...|...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~ 184 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSH 184 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhc
Confidence 7444433 456778888888888776322222 22335566666666655321 112234444
Q ss_pred CCCCEEEcccCCCCCCCC-----CCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCe
Q 002158 254 SKLVKLSLRNCNLQGAVP-----DLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQT 328 (958)
Q Consensus 254 ~~L~~L~L~~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 328 (958)
+.|+.+.+..|.|..... .+..+++|+.|||.+|-++..-. ..+...+..+++|++
T Consensus 185 ~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs-------------------~~LakaL~s~~~L~E 245 (382)
T KOG1909|consen 185 PTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGS-------------------VALAKALSSWPHLRE 245 (382)
T ss_pred cccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHH-------------------HHHHHHhcccchhee
Confidence 555555555555532211 14444555555555554431100 023444555666777
Q ss_pred EeeecccCCCccchhhhcccccCccccceEeccCCCCCCCc-----cCC-CCCCcceEEeCCCCCC
Q 002158 329 LSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIV-----GDL-TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 329 L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~-----~~~-~l~~L~~L~l~~N~l~ 388 (958)
|++++|.+.......+.....-..+.|+.|+|.+|.|+.=. ... ..|.|..|+|+||.+.
T Consensus 246 l~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 246 LNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 77777777666655555544444566677777777776411 111 5788889999999884
No 471
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.20 E-value=1.7e-10 Score=116.04 Aligned_cols=134 Identities=16% Similarity=0.104 Sum_probs=98.0
Q ss_pred ceeeeeCCeEEEEEEECC-------CcEEEEEEeccCCh----------------------hcHHHH----HHHHHHHHc
Q 002158 631 TQVGQGGYGKVYKGILSD-------NTTVAIKRAEEGSL----------------------QGQNEF----LTEIKLLSR 677 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~~----~~E~~~l~~ 677 (958)
..||.|.-+.||.|...+ +..+|||+.+.... ...+.+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998643 47999997642100 001122 379999999
Q ss_pred cCC--CCcceEEEEEEeCCeEEEEEEecCCCCHH-HHhccCCCCCchHHHHHHHHHHHHHHHHHh-hhcCCCCeeccCCC
Q 002158 678 LHH--RNLVSLLGYCDEEGEQMLVYEFVPNGTLR-DWLSGRTKENLNFAMRLRVALDSAKGILYL-HTEAHPPVFHRDIK 753 (958)
Q Consensus 678 l~H--~niv~l~~~~~~~~~~~lV~E~~~~gsL~-~~l~~~~~~~l~~~~~~~i~~~ia~aL~yL-H~~~~~~iiH~Dik 753 (958)
+.. -++.+++++ ...++||||+.+..+. ..+++. .++..+...+..+++.+|.++ |+.+ +||||++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 953 567777765 4678999999765332 223221 244556677889999999999 7888 9999999
Q ss_pred ccceEecCCCCeEEeeeeeecc
Q 002158 754 ASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 754 p~NILl~~~~~~kl~DFGla~~ 775 (958)
+.||+++ ++.+.|+|||.+..
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred HHHEEEE-CCcEEEEECCCcee
Confidence 9999997 57899999998764
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.19 E-value=1.5e-12 Score=149.64 Aligned_cols=197 Identities=25% Similarity=0.297 Sum_probs=119.3
Q ss_pred cCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchh
Q 002158 130 GNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIH 209 (958)
Q Consensus 130 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 209 (958)
..+..++.+++..|.+. .+-..+..+++|+.|++.+|+|.. +...+..+++|++|+|++|.|+...+ +..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhh
Confidence 34566777777777777 344446777788888888888873 33336677788888888888874433 566667778
Q ss_pred hhccCCccccCCCcccCCCCCccEEEccCCCCCCCCcccc-ccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCc
Q 002158 210 LLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPAT-YGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNH 288 (958)
Q Consensus 210 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~ 288 (958)
|++++|.|+.. ..+..+++|+.+++++|+++..+ .. ...+.+|+.+++.+|.+.. +..+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie--~~~~~~~~~l~~l~l~~n~i~~-i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIE--NDELSELISLEELDLGGNSIRE-IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhh--hhhhhhccchHHHhccCCchhc-ccchHHHHHHHHhhccccc
Confidence 88888877643 44555777777777777775322 21 3556667777777776652 2233334444445666666
Q ss_pred CCCcCCCCCCCCC--cCEEEccCCcCCCccchhccCCCCCCeEeeecccCC
Q 002158 289 LTGSIPSKKLSEN--VTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLT 337 (958)
Q Consensus 289 l~~~~~~~~~~~~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 337 (958)
++ .+.....+.. |+.+++++|.+.... ..+..+..+..|++.+|++.
T Consensus 220 i~-~~~~l~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 220 IS-KLEGLNELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred ce-eccCcccchhHHHHHHhcccCcccccc-ccccccccccccchhhcccc
Confidence 65 3322222222 566666666665321 44445555555555555554
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.15 E-value=6.6e-12 Score=127.52 Aligned_cols=133 Identities=24% Similarity=0.308 Sum_probs=92.2
Q ss_pred hcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcC
Q 002158 201 LSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLY 280 (958)
Q Consensus 201 l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~ 280 (958)
+.....|++|||++|.|+ .+..+..-+|.++.|++++|.|+. -+.+..+++|+.|+|++|.++....--..+-+.+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~---v~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT---VQNLAELPQLQLLDLSGNLLAECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee---ehhhhhcccceEeecccchhHhhhhhHhhhcCEe
Confidence 344456777777777776 455566666777777777777752 2336677777777777777775554444556777
Q ss_pred EEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCc-cchhccCCCCCCeEeeecccCCC
Q 002158 281 YLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGS-ILESISNLPFLQTLSLENNFLTG 338 (958)
Q Consensus 281 ~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~ 338 (958)
.|.|++|.|. .+.....+-+|..||+++|+|... .-..+++||-|+.|.|.+|+|.+
T Consensus 356 tL~La~N~iE-~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 356 TLKLAQNKIE-TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eeehhhhhHh-hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 7788888776 455555566778888888887652 34567888888888888888884
No 474
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.13 E-value=6.3e-10 Score=106.72 Aligned_cols=143 Identities=22% Similarity=0.252 Sum_probs=106.8
Q ss_pred CCceeeeeCCeEEEEEEECCCcEEEEEE-eccC--C-----hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 629 SSTQVGQGGYGKVYKGILSDNTTVAIKR-AEEG--S-----LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~--~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
....|-+|+-+.|+++.+ .|+...||. +.+. . .-..++-.+|++.+.+.+--.|.-..=++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456899999999999998 577777774 3221 1 112356788999999987555554444555666677999
Q ss_pred EecCC-CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC---CeEEeeeeeecc
Q 002158 701 EFVPN-GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL---NAKVADFGLSRL 775 (958)
Q Consensus 701 E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~---~~kl~DFGla~~ 775 (958)
||+++ .++.+++..........+.....+..|-+.+.-||..+ |||+||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 47888887654433444444788899999999999999 99999999999997655 358999999864
No 475
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.12 E-value=2.1e-12 Score=134.67 Aligned_cols=240 Identities=19% Similarity=0.222 Sum_probs=146.6
Q ss_pred eeEEEEccCCcCCCC----ccccccCCCCcceeeccCcccCC----CCcc-------ccCCCCCcEEEeeCCCCCCCCCh
Q 002158 87 HVRELQLLSMNLSGN----LAPELGQLSRLQYYFMWNDLTGT----IPKE-------IGNISSLIFLLLNGNKLSGSLPD 151 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~----~~~~l~~L~~L~~L~l~n~~~~~----ip~~-------i~~l~~L~~L~Ls~n~l~~~~p~ 151 (958)
.++.|+|++|.+... +.+.+.+.++|+.-++++-++|. +|+. +...++|++||||.|.|.-.-+.
T Consensus 31 s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~ 110 (382)
T KOG1909|consen 31 SLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIR 110 (382)
T ss_pred ceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchH
Confidence 588999999988764 66778888889888888777764 4433 33445777777777777644443
Q ss_pred h----hcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccC----CCc
Q 002158 152 E----LGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGN----LPP 223 (958)
Q Consensus 152 ~----l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~----~~~ 223 (958)
. +.++..|++|.|.+|.+.-.--..++. .|..|. .|+ ...+-+.|+++...+|++... +..
T Consensus 111 ~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga~~~A~ 179 (382)
T KOG1909|consen 111 GLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGGATALAE 179 (382)
T ss_pred HHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccccHHHHHH
Confidence 3 345666777777777665111111110 011111 111 112234566666666666522 123
Q ss_pred ccCCCCCccEEEccCCCCCCCC---ccccccCCCCCCEEEcccCCCCCCCC-----CCCCCCCcCEEeccCCcCCCcCCC
Q 002158 224 ELSELPQLCILQLDNNNFSASE---IPATYGNFSKLVKLSLRNCNLQGAVP-----DLSRIPNLYYLDLSWNHLTGSIPS 295 (958)
Q Consensus 224 ~l~~l~~L~~L~L~~N~l~~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~~~~~~ 295 (958)
.|...+.|+.+.++.|.|.... +...|..+++|+.|+|.+|.++.... .++.+++|+.|++++|.+...-..
T Consensus 180 ~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~ 259 (382)
T KOG1909|consen 180 AFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAI 259 (382)
T ss_pred HHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHH
Confidence 4455566777777777664211 12345667777777777777764332 267778888888888887632110
Q ss_pred -----C-CCCCCcCEEEccCCcCCC----ccchhccCCCCCCeEeeecccCC
Q 002158 296 -----K-KLSENVTTIDLSDNYLNG----SILESISNLPFLQTLSLENNFLT 337 (958)
Q Consensus 296 -----~-~~~~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~ 337 (958)
. ...++|+.|.|.+|.|+. .+...+...+.|..|+|++|++.
T Consensus 260 a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 260 AFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 1 124688888999998864 34445566889999999999993
No 476
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=3.7e-10 Score=118.42 Aligned_cols=142 Identities=24% Similarity=0.348 Sum_probs=111.8
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCC--CCcceEEEEEEeC---CeEEEEEEecC
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHH--RNLVSLLGYCDEE---GEQMLVYEFVP 704 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~---~~~~lV~E~~~ 704 (958)
+.|+.|.++.||++...+|+.+++|....... .....+..|+++++.+.+ ..+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987778999999765432 134568899999999975 4467788887664 36789999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcC-----------------------------------------
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEA----------------------------------------- 743 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~----------------------------------------- 743 (958)
|.++.+.+.. ..++..++..++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888776532 23677778888889999999988531
Q ss_pred ------------CCCeeccCCCccceEecC--CCCeEEeeeeeecc
Q 002158 744 ------------HPPVFHRDIKASNILLDS--NLNAKVADFGLSRL 775 (958)
Q Consensus 744 ------------~~~iiH~Dikp~NILl~~--~~~~kl~DFGla~~ 775 (958)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245899999999999998 66789999998764
No 477
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.10 E-value=4.8e-11 Score=134.39 Aligned_cols=247 Identities=20% Similarity=0.215 Sum_probs=178.0
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC--CCcEEEEEEeccCChhc--HHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS--DNTTVAIKRAEEGSLQG--QNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 696 (958)
..+.+|..+..||.|.|+.||+...+ ++..+++|.+....... ...-..|+.+...+ .|.++++....+..-...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34557888899999999999997743 57889999876643222 22235677777777 488999888888777788
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeeeecc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGLSRL 775 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla~~ 775 (958)
|+=-|||.++++...+ .....++...++++..|++.++.++|+.. ++|+|+||+||++..+ +..+++|||.+..
T Consensus 342 ~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccc
Confidence 8999999999887766 22334778889999999999999999988 9999999999999876 7889999998863
Q ss_pred cccCCCCCCccceeeeeccCCCCcc--ChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYL--DPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
+.. .. ....+.-+++ +++......+..+.|+||||..+.|.++|..--..+.. + .
T Consensus 417 ~~~---------~~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~----------~ 473 (524)
T KOG0601|consen 417 LAF---------SS-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---S----------L 473 (524)
T ss_pred cce---------ec-ccccccccccccchhhccccccccccccccccccccccccCcccCccccc---c----------e
Confidence 211 11 1122333444 55555566788899999999999999998642221111 0 1
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
.+..+.....+.. ..++..+.+.++.+++..||.+.+...+.+
T Consensus 474 ~i~~~~~p~~~~~-~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 474 TIRSGDTPNLPGL-KLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred eeecccccCCCch-HHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 1111112222333 377888889999999999999988776543
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=1.7e-11 Score=120.83 Aligned_cols=57 Identities=37% Similarity=0.568 Sum_probs=8.5
Q ss_pred CCcEEEeeCCCCCCCCChhhc-CCCCCCEEecccccccccCccccccccccceEeccccccc
Q 002158 134 SLIFLLLNGNKLSGSLPDELG-YLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIG 194 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 194 (958)
++++|+|.+|.|+ .+. .++ .+.+|+.|+|++|.|+.. +.+..+++|+.|++++|.|+
T Consensus 20 ~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 20 KLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---
T ss_pred ccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC
Confidence 4455555555544 221 233 244444444444444421 12334444444444444444
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.09 E-value=3.7e-11 Score=118.52 Aligned_cols=131 Identities=30% Similarity=0.349 Sum_probs=42.1
Q ss_pred CCCCEEEcccCCCCCCCCCCC-CCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeee
Q 002158 254 SKLVKLSLRNCNLQGAVPDLS-RIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLE 332 (958)
Q Consensus 254 ~~L~~L~L~~N~l~~~~~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 332 (958)
.++++|+|.+|+|+.+ ..+. .+.+|+.|+|++|.|+ .++....+++|+.|+|++|.|+.+.+.....+++|++|+|+
T Consensus 19 ~~~~~L~L~~n~I~~I-e~L~~~l~~L~~L~Ls~N~I~-~l~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~ 96 (175)
T PF14580_consen 19 VKLRELNLRGNQISTI-ENLGATLDKLEVLDLSNNQIT-KLEGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLS 96 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-T
T ss_pred cccccccccccccccc-cchhhhhcCCCEEECCCCCCc-cccCccChhhhhhcccCCCCCCccccchHHhCCcCCEEECc
Confidence 3455555555555532 2333 3455555556655555 34444444555555555555554322222345555555555
Q ss_pred cccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccc
Q 002158 333 NNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTN 412 (958)
Q Consensus 333 ~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~ 412 (958)
+|+|.. +.++.....+++|+.|+|.|||++. ...++.+.....+....|++
T Consensus 97 ~N~I~~--------------------------l~~l~~L~~l~~L~~L~L~~NPv~~---~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 97 NNKISD--------------------------LNELEPLSSLPKLRVLSLEGNPVCE---KKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp TS---S--------------------------CCCCGGGGG-TT--EEE-TT-GGGG---STTHHHHHHHH-TT-SEETT
T ss_pred CCcCCC--------------------------hHHhHHHHcCCCcceeeccCCcccc---hhhHHHHHHHHcChhheeCC
Confidence 555541 1112222378899999999999954 34556666666666666666
Q ss_pred cCC
Q 002158 413 SKV 415 (958)
Q Consensus 413 n~~ 415 (958)
.++
T Consensus 148 ~~V 150 (175)
T PF14580_consen 148 QDV 150 (175)
T ss_dssp EET
T ss_pred EEc
Confidence 554
No 480
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.09 E-value=1.2e-11 Score=142.09 Aligned_cols=218 Identities=29% Similarity=0.320 Sum_probs=135.7
Q ss_pred CCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEe
Q 002158 108 QLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLH 187 (958)
Q Consensus 108 ~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 187 (958)
.+..++.+.+..|.++.+-..+..+++|+.|++.+|.|. .+...+..+++|++|+|++|+|+.+. .+..++.|+.|+
T Consensus 70 ~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred HhHhHHhhccchhhhhhhhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 455555566666666665555777777777777777777 44433666777777777777777442 355666677777
Q ss_pred cccccccccCchhhcCCccchhhhccCCccccCCC-cccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCC
Q 002158 188 LNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLP-PELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNL 266 (958)
Q Consensus 188 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l 266 (958)
+++|.|+. + ..+..+.+|+.+++++|++....+ . +..+.+|+.+++.+|.+.. ...+..+..+..+++..|.+
T Consensus 147 l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~---i~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 147 LSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE---IEGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eccCcchh-c-cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc---ccchHHHHHHHHhhcccccc
Confidence 77777772 2 235557777777777777774433 2 4666777777777777752 33344444555557777777
Q ss_pred CCCCCCCCCCC--CcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCC
Q 002158 267 QGAVPDLSRIP--NLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLT 337 (958)
Q Consensus 267 ~~~~~~l~~l~--~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 337 (958)
+...+ +..+. +|+.+++++|.+.........+.++..|++.+|++... ..+...+.+..+.+..|.+.
T Consensus 221 ~~~~~-l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 221 SKLEG-LNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred eeccC-cccchhHHHHHHhcccCccccccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 64332 22222 37777777777762223445556777777777777532 22344455555556666554
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=9.7e-10 Score=106.30 Aligned_cols=131 Identities=19% Similarity=0.302 Sum_probs=100.4
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEE-eccC--Chh-----cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKR-AEEG--SLQ-----GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~--~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..+++|+-+.+|.+.+. |.++++|. +.+. .+. ...+-.+|+.++++++--.|.-.+=+..+.....++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999874 44566764 2221 111 123567899999999766666556666677788999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
++|..|.+.+... +..++..+-.-+.-||..| |+|+|+.++||++..+. +.++|||++.+
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999999654 2456777777888999999 99999999999997665 99999999874
No 482
>PLN03150 hypothetical protein; Provisional
Probab=99.03 E-value=2.4e-10 Score=137.34 Aligned_cols=108 Identities=28% Similarity=0.519 Sum_probs=94.7
Q ss_pred CCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEcc
Q 002158 158 NLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLD 237 (958)
Q Consensus 158 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 237 (958)
.++.|+|++|.++|.+|..+..+++|+.|+|++|.|+|.+|..+..+++|+.|+|++|++++.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccccCC-CCCCEEEcccCCC
Q 002158 238 NNNFSASEIPATYGNF-SKLVKLSLRNCNL 266 (958)
Q Consensus 238 ~N~l~~~~~p~~~~~l-~~L~~L~L~~N~l 266 (958)
+|+++ +.+|..+..+ .++..+++.+|..
T Consensus 499 ~N~l~-g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 499 GNSLS-GRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CCccc-ccCChHHhhccccCceEEecCCcc
Confidence 99997 5778877653 4677888888864
No 483
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=3.4e-10 Score=138.56 Aligned_cols=247 Identities=23% Similarity=0.308 Sum_probs=146.0
Q ss_pred eeEEEEccCCc--CCCCccccccCCCCcceeeccC-cccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEe
Q 002158 87 HVRELQLLSMN--LSGNLAPELGQLSRLQYYFMWN-DLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQ 163 (958)
Q Consensus 87 ~v~~L~L~~~~--l~~~~~~~l~~L~~L~~L~l~n-~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 163 (958)
.+++|-+..|. +.......|..++.|++|+++. ...+.+|..|++|-+|++|+|++..+. .+|..+.+|++|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 56777777765 3433444467788888888774 445678888888888888888888887 7788888888888888
Q ss_pred cccccccccCccccccccccceEecccccc--cccCchhhcCCccchhhhccCCccccCCCcccCCCCCcc----EEEcc
Q 002158 164 VDENNITGTIPKSFANLSRVRHLHLNNNSI--GGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLC----ILQLD 237 (958)
Q Consensus 164 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l--~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~----~L~L~ 237 (958)
+..+.-...+|.....|++|++|.+..-.. +...-..+.++.+|+.|....... .+-..+..++.|. .+.+.
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~ 702 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIE 702 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhc
Confidence 887776555666666678888887765542 222333445555555555533322 1112223333333 22322
Q ss_pred CCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCC------CCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCC
Q 002158 238 NNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSR------IPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDN 310 (958)
Q Consensus 238 ~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~------l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N 310 (958)
++.. ...+..+..+.+|+.|.+.++.+...... ... +++|..+...++..-..+....+.++|+.|.+.++
T Consensus 703 ~~~~--~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~f~~~L~~l~l~~~ 780 (889)
T KOG4658|consen 703 GCSK--RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWLLFAPHLTSLSLVSC 780 (889)
T ss_pred cccc--ceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccccccchhhccCcccEEEEecc
Confidence 2222 23456677777888888888777643321 111 22222222223222223333456678888888877
Q ss_pred cCCCccchhccCCCCCCeEeeecccCCC
Q 002158 311 YLNGSILESISNLPFLQTLSLENNFLTG 338 (958)
Q Consensus 311 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 338 (958)
.....+......+..++.+-+..+.+.+
T Consensus 781 ~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 781 RLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred cccccCCCHHHHhhhcccEEeccccccc
Confidence 7766666666666666666666666654
No 484
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.96 E-value=1.5e-08 Score=108.12 Aligned_cols=140 Identities=14% Similarity=0.132 Sum_probs=102.7
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCChhc-H----------HHHHHHHHHHHccCCCC--cceEEEEEEe-----
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQG-Q----------NEFLTEIKLLSRLHHRN--LVSLLGYCDE----- 692 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~----------~~~~~E~~~l~~l~H~n--iv~l~~~~~~----- 692 (958)
+.+-+-....|++..+ +|+.|.||+........ . ..+.+|...+.++...+ .++++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3455444556778766 67889999875433211 1 14789999998884333 3455666543
Q ss_pred CCeEEEEEEecCCC-CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-------CCC
Q 002158 693 EGEQMLVYEFVPNG-TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-------NLN 764 (958)
Q Consensus 693 ~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-------~~~ 764 (958)
....+||||++++. +|.+++........+...+..++.+++..+.-||+.| |+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCce
Confidence 23578999999876 8999985432233556677899999999999999999 999999999999975 467
Q ss_pred eEEeeeeeec
Q 002158 765 AKVADFGLSR 774 (958)
Q Consensus 765 ~kl~DFGla~ 774 (958)
+.++||+.++
T Consensus 184 ~~LIDl~r~~ 193 (268)
T PRK15123 184 LSVIDLHRAQ 193 (268)
T ss_pred EEEEECCccc
Confidence 9999999875
No 485
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.92 E-value=3.5e-08 Score=108.59 Aligned_cols=214 Identities=15% Similarity=0.201 Sum_probs=149.1
Q ss_pred CeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe----CCeEEEEEEecCC-CCHHHH
Q 002158 638 YGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE----EGEQMLVYEFVPN-GTLRDW 711 (958)
Q Consensus 638 ~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~E~~~~-gsL~~~ 711 (958)
..+.||+... ||..|+.|+++.........-..-+++++++.|.|+|++.+++.. +...++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3588999865 899999999955433333233456889999999999999998763 4468999999986 478776
Q ss_pred hccCC-------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 712 LSGRT-------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 712 l~~~~-------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
..... ....++...+.++.|++.||.++|+.| +.-+-+.+.+|+++.+.+++|+..|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 53221 223778899999999999999999999 89999999999999999999998887765432
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
... |-+ +--.+-|.-.||.+++.|.||..--........ ..
T Consensus 446 d~~---------------------~~l---e~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~-s~-------------- 486 (655)
T KOG3741|consen 446 DPT---------------------EPL---ESQQQNDLRDLGLLLLALATGTENSNRTDSTQS-SH-------------- 486 (655)
T ss_pred CCC---------------------cch---hHHhhhhHHHHHHHHHHHhhcccccccccchHH-HH--------------
Confidence 110 001 112367899999999999999653211111000 00
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..........++.+++......++++ -+..+++.+
T Consensus 487 -~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 487 -LTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred -HHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 00112344566667777777777776 456655543
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.91 E-value=2.3e-10 Score=134.83 Aligned_cols=253 Identities=19% Similarity=0.229 Sum_probs=170.7
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
..+.|.+.+-+-+|.++.++.+.-. .|...++|+..... ..+.+....+-.++-..+||-+++..--+......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4455666777888999999887633 34344444332211 1111122223333333345666655444455678899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
|++|..+++|...++... ..+.+.+......+..+++|||... +.|||++|.|.++..++..++.|||.......
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999998654 3555555666777888999999987 89999999999999999999999984433211
Q ss_pred C---C------------------CCC---CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCC
Q 002158 779 L---D------------------DEG---TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPIS 834 (958)
Q Consensus 779 ~---~------------------~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~ 834 (958)
. . ... ...........||+.|.+||...+......+|.|+.|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 1 0 000 000122345679999999999999999999999999999999999999997
Q ss_pred CCchhHHHHHHHhhcCcchhhhc--ccCCCCChHHHHHHHHHHHHccccCCCCCCCHH
Q 002158 835 HGKNIVREVNVARDSGMVFSIID--NRMGSYPSECVERFVTLALRCCHDKPEHRPSMS 890 (958)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 890 (958)
....- +.+ ..++. ..++.-+........+++...+..+|.+|-.+.
T Consensus 1037 a~tpq-~~f---------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQ-QIF---------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchh-hhh---------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 53321 111 11111 112233455667788899999999999997666
No 487
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.89 E-value=9.1e-11 Score=119.50 Aligned_cols=224 Identities=17% Similarity=0.181 Sum_probs=129.3
Q ss_pred cccccceEeccccccc--ccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCC
Q 002158 179 NLSRVRHLHLNNNSIG--GQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKL 256 (958)
Q Consensus 179 ~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L 256 (958)
..+.++.|||.+|.|+ ..+...+.+|+.|++|+|+.|.+...+...-..+.+|+.|.|.+..+.+......+..++++
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 3456777777777776 34445567778888888888887744433224567888888888888776666677788888
Q ss_pred CEEEcccCCCCCCCC---CCCCC-CCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeee
Q 002158 257 VKLSLRNCNLQGAVP---DLSRI-PNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLE 332 (958)
Q Consensus 257 ~~L~L~~N~l~~~~~---~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 332 (958)
++|+++.|.+..... ..... +.+..|.+-.| +..+.++-|++. .-+|++..+-+.
T Consensus 149 telHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c--------------~~~~w~~~~~l~-------r~Fpnv~sv~v~ 207 (418)
T KOG2982|consen 149 TELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPC--------------LEQLWLNKNKLS-------RIFPNVNSVFVC 207 (418)
T ss_pred hhhhhccchhhhhccccccccccchhhhhhhcCCc--------------HHHHHHHHHhHH-------hhcccchheeee
Confidence 888888875432111 01111 12222222222 111222222221 123445555555
Q ss_pred cccCCCccc-hhhhcccccCccccceEeccCCCCCCC---ccCCCCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCc
Q 002158 333 NNFLTGSIP-ATIWQNKSFSTKARLKIDLRNNSFSNI---VGDLTLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDE 408 (958)
Q Consensus 333 ~N~l~~~ip-~~l~~~~~~~~~~l~~L~Ls~N~l~~l---~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~ 408 (958)
.|+|...-. +..-+ .+.+--|.|+.|+|.+. .....++.|..|.+.+||+...-.....+.+++.+.....
T Consensus 208 e~PlK~~s~ek~se~-----~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~ 282 (418)
T KOG2982|consen 208 EGPLKTESSEKGSEP-----FPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQ 282 (418)
T ss_pred cCcccchhhcccCCC-----CCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceE
Confidence 555542111 11111 12222466666666653 3444899999999999999766666666777777777777
Q ss_pred cccccCCCCCCCCCCCCCcc
Q 002158 409 TLTNSKVNCPVQACPVDNFF 428 (958)
Q Consensus 409 ~L~~n~~~C~c~~~~~~~~~ 428 (958)
.|+|..+.-+-.--.-+.++
T Consensus 283 vLNGskIss~er~dSEr~fV 302 (418)
T KOG2982|consen 283 VLNGSKISSRERKDSERRFV 302 (418)
T ss_pred EecCcccchhhhhhhHHHHH
Confidence 88887665544444444433
No 488
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.85 E-value=1.1e-08 Score=102.68 Aligned_cols=124 Identities=23% Similarity=0.289 Sum_probs=82.5
Q ss_pred EEEEEEECCCcEEEEEEeccCCh---------------------h-----cHHHHHHHHHHHHccCCC--CcceEEEEEE
Q 002158 640 KVYKGILSDNTTVAIKRAEEGSL---------------------Q-----GQNEFLTEIKLLSRLHHR--NLVSLLGYCD 691 (958)
Q Consensus 640 ~Vy~~~~~~~~~vavK~~~~~~~---------------------~-----~~~~~~~E~~~l~~l~H~--niv~l~~~~~ 691 (958)
.||.|...+|..||||..+.... . ......+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999998999999998643100 0 113467899999999765 567777553
Q ss_pred eCCeEEEEEEecC--CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHH-hhhcCCCCeeccCCCccceEecCCCCeEEe
Q 002158 692 EEGEQMLVYEFVP--NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILY-LHTEAHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 692 ~~~~~~lV~E~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~y-LH~~~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
...+||||++ |..+..+.... ++.+....++.+++..+.. +|..| |+|+|+.+.||+++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEE
Confidence 3479999998 54554433211 2234456777788886555 57888 9999999999999887 99999
Q ss_pred eeeeecc
Q 002158 769 DFGLSRL 775 (958)
Q Consensus 769 DFGla~~ 775 (958)
|||.+..
T Consensus 149 Df~qav~ 155 (188)
T PF01163_consen 149 DFGQAVD 155 (188)
T ss_dssp -GTTEEE
T ss_pred ecCccee
Confidence 9998763
No 489
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.81 E-value=6.8e-11 Score=133.18 Aligned_cols=131 Identities=27% Similarity=0.414 Sum_probs=78.4
Q ss_pred CccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCC-CCcCEEEcc
Q 002158 230 QLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLS-ENVTTIDLS 308 (958)
Q Consensus 230 ~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~L~~L~Ls 308 (958)
.|...+.+.|++. .+...+.-++.|+.|+|++|+++... .+..+++|+.|||++|.+. .+|....- -+|+.|.|+
T Consensus 165 ~L~~a~fsyN~L~--~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV--LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH--hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhc-cccccchhhhhheeeeec
Confidence 4555566666663 34455555666666666666666443 5666667777777777766 45544222 246666666
Q ss_pred CCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCC
Q 002158 309 DNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPIC 388 (958)
Q Consensus 309 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~ 388 (958)
+|.++. ...+.+|.+|+.|||++|-|.+ .+++.....+..|+.|+|.|||++
T Consensus 241 nN~l~t--L~gie~LksL~~LDlsyNll~~--------------------------hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTT--LRGIENLKSLYGLDLSYNLLSE--------------------------HSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHh--hhhHHhhhhhhccchhHhhhhc--------------------------chhhhHHHHHHHHHHHhhcCCccc
Confidence 666642 2334556666666666666652 111222336778899999999998
Q ss_pred CCCC
Q 002158 389 TSAN 392 (958)
Q Consensus 389 ~~~~ 392 (958)
|...
T Consensus 293 c~p~ 296 (1096)
T KOG1859|consen 293 CAPW 296 (1096)
T ss_pred cCHH
Confidence 8653
No 490
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.77 E-value=2.5e-07 Score=99.34 Aligned_cols=261 Identities=17% Similarity=0.182 Sum_probs=163.5
Q ss_pred CCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEE------E-EeCCeEEEE
Q 002158 628 SSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGY------C-DEEGEQMLV 699 (958)
Q Consensus 628 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~------~-~~~~~~~lV 699 (958)
.....||+|+.+.+|..- +-...+.|++.........+ .++.|... .||-+-.=+.+ . ..+....++
T Consensus 14 ~~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecc--hhhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 345679999999999642 22234557776554433322 23334444 56654331221 1 122347788
Q ss_pred EEecCCC-CHHHHhccC----CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 700 YEFVPNG-TLRDWLSGR----TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 700 ~E~~~~g-sL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
|..+++. -+.+++... .-....|...++.+..+|.+.+-||+.| .+-+|+.++|+|+.+++.+.|.|=..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEccccee
Confidence 9988764 344444322 2244889999999999999999999999 8889999999999999999998754322
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhC-CCCCCCCchhH---HHHHH
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTG-MQPISHGKNIV---REVNV 845 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG-~~P~~~~~~~~---~~~~~ 845 (958)
+. .. ......-+|...|.+||.-. +..-+...|-|.+|+++++++.| ++||.+-.... .-...
T Consensus 166 i~----~n----g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~ 237 (637)
T COG4248 166 IN----AN----GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET 237 (637)
T ss_pred ec----cC----CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh
Confidence 21 11 12223346889999999865 33456789999999999999986 99997522100 00000
Q ss_pred HhhcCcchhhhcccC------CCCC-hHHHHHHHHHHHHccccC--CCCCCCHHHHHHHHHHhHhhCC
Q 002158 846 ARDSGMVFSIIDNRM------GSYP-SECVERFVTLALRCCHDK--PEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 846 ~~~~~~~~~~i~~~~------~~~~-~~~~~~l~~li~~cl~~d--P~~RPs~~evl~~L~~~~~~~~ 904 (958)
....+.+....+.+. ...| .-.+..+..+..+|+... +.-||+++..+..|..+.+++.
T Consensus 238 ~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 238 DIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred hhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 001111111111111 1112 234667888999998764 5689999988877766655443
No 491
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.75 E-value=3.2e-08 Score=101.55 Aligned_cols=135 Identities=19% Similarity=0.203 Sum_probs=97.1
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCCh----------------------hcHHHHHHHHHHHHccCCC--
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSL----------------------QGQNEFLTEIKLLSRLHHR-- 681 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~H~-- 681 (958)
-..+.+.||.|.-+.||.|....|.++|||.-+.... -......+|.++|.++.-.
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 3456689999999999999999999999995322110 0123357899999999644
Q ss_pred CcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC
Q 002158 682 NLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS 761 (958)
Q Consensus 682 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~ 761 (958)
.+.+.+++ +...+||||++|--|+..- ++.+..-.++..|++-+..+-..| |||+|+.+-||++++
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~ 237 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTE 237 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence 77777765 4568999999886665432 122233344444444444444667 999999999999999
Q ss_pred CCCeEEeeeeeec
Q 002158 762 NLNAKVADFGLSR 774 (958)
Q Consensus 762 ~~~~kl~DFGla~ 774 (958)
||.+.++||--+.
T Consensus 238 dg~~~vIDwPQ~v 250 (304)
T COG0478 238 DGDIVVIDWPQAV 250 (304)
T ss_pred CCCEEEEeCcccc
Confidence 9999999996543
No 492
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.64 E-value=4.5e-08 Score=120.24 Aligned_cols=176 Identities=24% Similarity=0.315 Sum_probs=98.4
Q ss_pred CcceeeccCcc--cCCCCcc-ccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEe
Q 002158 111 RLQYYFMWNDL--TGTIPKE-IGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLH 187 (958)
Q Consensus 111 ~L~~L~l~n~~--~~~ip~~-i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 187 (958)
+|+.|.+..|. ...++.. |..++.|++|||++|.=-+.+|..+++|-+|++|+|++..+. .+|..+.+|+.|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 46666554442 4444443 555777777777766555577777777777777777777776 6677777777777777
Q ss_pred cccccccccCchhhcCCccchhhhccCCccc--cCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCC----EEEc
Q 002158 188 LNNNSIGGQIPSELSKLSTLIHLLVDNNNLS--GNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLV----KLSL 261 (958)
Q Consensus 188 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~----~L~L 261 (958)
+..+.-...+|.....|.+|++|.+..-... ...-..+..+.+|+.|....... .+-..+..+.+|. .+.+
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~---~~~e~l~~~~~L~~~~~~l~~ 701 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV---LLLEDLLGMTRLRSLLQSLSI 701 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh---HhHhhhhhhHHHHHHhHhhhh
Confidence 7766655455665666777777766554422 12222334444444444422221 0111122222222 3333
Q ss_pred ccCCCCCCCCCCCCCCCcCEEeccCCcCC
Q 002158 262 RNCNLQGAVPDLSRIPNLYYLDLSWNHLT 290 (958)
Q Consensus 262 ~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 290 (958)
.++.....+..+..+.+|+.|.+.++.+.
T Consensus 702 ~~~~~~~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 702 EGCSKRTLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred cccccceeecccccccCcceEEEEcCCCc
Confidence 33444444445667777777777777765
No 493
>PRK09902 hypothetical protein; Provisional
Probab=98.64 E-value=5.5e-07 Score=90.85 Aligned_cols=137 Identities=17% Similarity=0.186 Sum_probs=105.1
Q ss_pred eeeeCCeEEEEEEECCCcEEEEEEeccC---C---hhcHHHHHHHHHHHHccCC--CCcceEEEEEE-e----CCeEEEE
Q 002158 633 VGQGGYGKVYKGILSDNTTVAIKRAEEG---S---LQGQNEFLTEIKLLSRLHH--RNLVSLLGYCD-E----EGEQMLV 699 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~-~----~~~~~lV 699 (958)
-|+||-+-|++-.. +|..+-+|+-... + +.....|.+|+..+.++.. -.+.++. ++. . .-..+||
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 36688888999776 4457889976521 1 3456789999999999953 2355555 332 1 1246899
Q ss_pred EEecCC-CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC--eEEeeeeeec
Q 002158 700 YEFVPN-GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN--AKVADFGLSR 774 (958)
Q Consensus 700 ~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~--~kl~DFGla~ 774 (958)
+|-+++ -+|.+++.+....+.+...+..+..++++.+.-||+.| +.|+|+.+.||+++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998854 58999997655445778888999999999999999999 999999999999986667 9999998765
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.61 E-value=5.2e-10 Score=126.26 Aligned_cols=155 Identities=30% Similarity=0.359 Sum_probs=82.0
Q ss_pred CccccCCCCCcEEEeeCCCCCCCCChhhcCCC-CCCEEeccccccc----------ccCccccccccccceEeccccccc
Q 002158 126 PKEIGNISSLIFLLLNGNKLSGSLPDELGYLS-NLNRLQVDENNIT----------GTIPKSFANLSRVRHLHLNNNSIG 194 (958)
Q Consensus 126 p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~----------~~~p~~~~~l~~L~~L~Ls~N~l~ 194 (958)
|-.|..+++|++|.|.++.|.. -..+..+. +|++|-.. |.++ |.+..++. -..|...+++.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~-Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPV-WNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchh-hhhHhhhhcchhhHH
Confidence 5567777888888888887762 11222222 34444322 2222 11111111 124566666677666
Q ss_pred ccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCC
Q 002158 195 GQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLS 274 (958)
Q Consensus 195 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~ 274 (958)
....++.-++.|+.|+|++|+++.. +.+..++.|++|||++|.++. +|..-..-.+|+.|.|++|.++.. .++.
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~--vp~l~~~gc~L~~L~lrnN~l~tL-~gie 251 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH--VPQLSMVGCKLQLLNLRNNALTTL-RGIE 251 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc--ccccchhhhhheeeeecccHHHhh-hhHH
Confidence 5555666666677777777766643 256666666666666666642 333111112356666666655522 2345
Q ss_pred CCCCcCEEeccCCcCC
Q 002158 275 RIPNLYYLDLSWNHLT 290 (958)
Q Consensus 275 ~l~~L~~L~Ls~N~l~ 290 (958)
++.+|+.|||++|-|.
T Consensus 252 ~LksL~~LDlsyNll~ 267 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLS 267 (1096)
T ss_pred hhhhhhccchhHhhhh
Confidence 5555555555555554
No 495
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.59 E-value=1.5e-08 Score=103.68 Aligned_cols=229 Identities=18% Similarity=0.184 Sum_probs=136.2
Q ss_pred cccccCCCCcceeeccCcccCCCCc--ccc-CCCCCcEEEeeCCCCCC--CCChhhcCCCCCCEEecccccccccCcccc
Q 002158 103 APELGQLSRLQYYFMWNDLTGTIPK--EIG-NISSLIFLLLNGNKLSG--SLPDELGYLSNLNRLQVDENNITGTIPKSF 177 (958)
Q Consensus 103 ~~~l~~L~~L~~L~l~n~~~~~ip~--~i~-~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 177 (958)
+-.+..+..++.|.+.+..+...-+ .|+ ..+.+++|||.+|.|+. .+-.-+.+|+.|+.|+|+.|.+...|-..-
T Consensus 38 ~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp 117 (418)
T KOG2982|consen 38 YLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLP 117 (418)
T ss_pred eeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCc
Confidence 3334445555566666555544332 233 35689999999999983 233346689999999999999985443222
Q ss_pred ccccccceEeccccccc-ccCchhhcCCccchhhhccCCcccc--CCCcccCCC-CCccEEEccCCCCCC-CCccccccC
Q 002158 178 ANLSRVRHLHLNNNSIG-GQIPSELSKLSTLIHLLVDNNNLSG--NLPPELSEL-PQLCILQLDNNNFSA-SEIPATYGN 252 (958)
Q Consensus 178 ~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~l~~l-~~L~~L~L~~N~l~~-~~~p~~~~~ 252 (958)
..+.+|+.|-|.+..+. ......+..++.++.|+++.|.+.- ......... +.+++|.+..|.... ......-.-
T Consensus 118 ~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~ 197 (418)
T KOG2982|consen 118 LPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI 197 (418)
T ss_pred ccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh
Confidence 46678999999888876 3344567788899999999985541 111111111 244444444443210 011111234
Q ss_pred CCCCCEEEcccCCCCCCCC--CCCCCCCcCEEeccCCcCCC--cCCCCCCCCCcCEEEccCCcCCCccch------hccC
Q 002158 253 FSKLVKLSLRNCNLQGAVP--DLSRIPNLYYLDLSWNHLTG--SIPSKKLSENVTTIDLSDNYLNGSILE------SISN 322 (958)
Q Consensus 253 l~~L~~L~L~~N~l~~~~~--~l~~l~~L~~L~Ls~N~l~~--~~~~~~~~~~L~~L~Ls~N~l~~~~~~------~~~~ 322 (958)
++++..+.+..|.|..... .+..++.+..|+|+.|+|.. .+.....++.|..|.+++|.|...... .++.
T Consensus 198 Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaR 277 (418)
T KOG2982|consen 198 FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIAR 277 (418)
T ss_pred cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEee
Confidence 5677777788887765543 26666777777888877753 233344556666777777766442211 2345
Q ss_pred CCCCCeEee
Q 002158 323 LPFLQTLSL 331 (958)
Q Consensus 323 l~~L~~L~L 331 (958)
|++++.|+=
T Consensus 278 L~~v~vLNG 286 (418)
T KOG2982|consen 278 LTKVQVLNG 286 (418)
T ss_pred ccceEEecC
Confidence 666665543
No 496
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.59 E-value=2.3e-08 Score=81.09 Aligned_cols=58 Identities=40% Similarity=0.548 Sum_probs=25.3
Q ss_pred cceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCC
Q 002158 183 VRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNN 240 (958)
Q Consensus 183 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 240 (958)
|++|++++|+|+...+..|.++++|++|++++|+++...+..|.++++|++|++++|+
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 4444444444443333344444444444444444444444444444444444444443
No 497
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.56 E-value=5.3e-07 Score=93.13 Aligned_cols=106 Identities=25% Similarity=0.346 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHccCC--CCcceEEEEEEeCC----eEEEEEEecCCC-CHHHHhccCCCCCchHHHHHHHHHHHHHHHH
Q 002158 665 QNEFLTEIKLLSRLHH--RNLVSLLGYCDEEG----EQMLVYEFVPNG-TLRDWLSGRTKENLNFAMRLRVALDSAKGIL 737 (958)
Q Consensus 665 ~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~----~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~ 737 (958)
..+..+|...+.++.. -...+.+++..... ..++|+|++++. +|.+++..... .+......++.++++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 3467889988888843 34567777766532 458999999874 89999975333 566678899999999999
Q ss_pred HhhhcCCCCeeccCCCccceEecCCC---CeEEeeeeeecc
Q 002158 738 YLHTEAHPPVFHRDIKASNILLDSNL---NAKVADFGLSRL 775 (958)
Q Consensus 738 yLH~~~~~~iiH~Dikp~NILl~~~~---~~kl~DFGla~~ 775 (958)
-||+.| |+|+|+++.|||++.++ .+.++||+-++.
T Consensus 133 ~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999 99999999999999887 899999998764
No 498
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.48 E-value=5.1e-07 Score=104.24 Aligned_cols=140 Identities=17% Similarity=0.253 Sum_probs=93.4
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCChhc----------------------------------------HHHHHH
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQG----------------------------------------QNEFLT 670 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~~ 670 (958)
+.|+.++-|.||+|++++|+.||||+.+.+-... +-+|.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6799999999999999999999999865431110 012455
Q ss_pred HHHHHHccC-----CCCcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHH-HHHhhhcCC
Q 002158 671 EIKLLSRLH-----HRNLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKG-ILYLHTEAH 744 (958)
Q Consensus 671 E~~~l~~l~-----H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~a-L~yLH~~~~ 744 (958)
|+..+.+++ .+++.=.-=|.+..+...|+|||++|-.+.+...-+. ...+.. .++..++++ +..+=..|
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k---~ia~~~~~~f~~q~~~dg- 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRK---ELAELLVRAFLRQLLRDG- 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHH---HHHHHHHHHHHHHHHhcC-
Confidence 666555552 3333222223334567899999999998988742222 124422 233333332 33333467
Q ss_pred CCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 745 PPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 745 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
++|.|.+|.||+++.+|.+.+.|||+...++
T Consensus 286 --ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 286 --FFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred --ccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 9999999999999999999999999987553
No 499
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.46 E-value=1.9e-06 Score=90.17 Aligned_cols=139 Identities=16% Similarity=0.254 Sum_probs=86.9
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCC--cceEEEEEEeCCeEEEEEEecCCCC-
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRN--LVSLLGYCDEEGEQMLVYEFVPNGT- 707 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lV~E~~~~gs- 707 (958)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.++++...+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 57999999999984 35567888886533 2334678999999986433 5788888888888899999998863
Q ss_pred HHHH---------------------hccCCCCCchHHHHH-HHHH----------HHHH-HHHHhhh-cCCCCeeccCCC
Q 002158 708 LRDW---------------------LSGRTKENLNFAMRL-RVAL----------DSAK-GILYLHT-EAHPPVFHRDIK 753 (958)
Q Consensus 708 L~~~---------------------l~~~~~~~l~~~~~~-~i~~----------~ia~-aL~yLH~-~~~~~iiH~Dik 753 (958)
+.+. +|.-........... ++-. .+.+ ...+|.. ...+.++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 2211 121100001111100 0000 0001 1122221 123457999999
Q ss_pred ccceEecCCCCeEEeeeeeecc
Q 002158 754 ASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 754 p~NILl~~~~~~kl~DFGla~~ 775 (958)
|.||++++++ +.|+||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999888 99999998753
No 500
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.40 E-value=9.8e-08 Score=109.26 Aligned_cols=159 Identities=21% Similarity=0.333 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC--CCccceeeeeccCCCCccChhhh
Q 002158 728 VALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE--GTMPTHVSTIVKGTPGYLDPEYF 805 (958)
Q Consensus 728 i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~--~~~~~~~~~~~~gt~~y~aPE~~ 805 (958)
=+.+++.|+.|+|...+ +||+.|.|++|.++..+.+||+.|+.+......... ............-...|.|||++
T Consensus 104 nl~~v~dgl~flh~sAk--~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 104 NLGNVADGLAFLHRSAK--VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hhhcccchhhhhccCcc--eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 34456699999997654 999999999999999999999999987643221110 00001111223355689999999
Q ss_pred ccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCC
Q 002158 806 LTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEH 885 (958)
Q Consensus 806 ~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 885 (958)
.....+.++|+||+|+++|-+..|..+................ ..+-....+..+.|.++.+=+.+++..++..
T Consensus 182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~------~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~ 255 (700)
T KOG2137|consen 182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN------LLNAGAFGYSNNLPSELRESLKKLLNGDSAV 255 (700)
T ss_pred ccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc------ccccccccccccCcHHHHHHHHHHhcCCccc
Confidence 9988889999999999999999544443222211110000000 0001111234567788888889999999999
Q ss_pred CCCHHHHHH
Q 002158 886 RPSMSDVVR 894 (958)
Q Consensus 886 RPs~~evl~ 894 (958)
||++.++..
T Consensus 256 rp~~~~l~~ 264 (700)
T KOG2137|consen 256 RPTLDLLLS 264 (700)
T ss_pred Ccchhhhhc
Confidence 998877664
Done!