Query 002158
Match_columns 958
No_of_seqs 988 out of 6961
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 14:49:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002158.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002158hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 5.4E-54 1.9E-58 467.2 18.6 263 625-905 13-293 (299)
2 4aoj_A High affinity nerve gro 100.0 3.7E-53 1.3E-57 467.1 24.6 261 626-904 42-322 (329)
3 3omv_A RAF proto-oncogene seri 100.0 1.2E-52 4.2E-57 456.4 23.8 264 625-905 36-304 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 1E-52 3.5E-57 459.2 20.5 255 627-899 28-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 1E-51 3.5E-56 455.3 18.7 251 625-895 24-277 (350)
6 4g3f_A NF-kappa-beta-inducing 100.0 5E-51 1.7E-55 447.8 22.0 263 625-907 58-322 (336)
7 4ase_A Vascular endothelial gr 100.0 5.7E-51 1.9E-55 453.2 20.0 272 616-904 55-350 (353)
8 4fih_A Serine/threonine-protei 100.0 9.1E-51 3.1E-55 447.0 19.6 250 625-895 74-324 (346)
9 3fpq_A Serine/threonine-protei 100.0 2.5E-50 8.4E-55 435.1 22.3 247 628-895 29-283 (290)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.5E-50 1.2E-54 435.7 17.2 250 625-895 32-285 (311)
11 4fie_A Serine/threonine-protei 100.0 1.4E-49 4.7E-54 448.3 21.1 250 625-895 151-401 (423)
12 3hyh_A Carbon catabolite-derep 100.0 1.7E-49 5.9E-54 424.7 19.1 246 625-895 13-263 (275)
13 3hmm_A TGF-beta receptor type- 100.0 4E-49 1.4E-53 431.9 20.7 264 626-902 4-298 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.5E-49 1.2E-53 428.1 13.6 247 625-894 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 1.4E-47 4.7E-52 417.6 21.7 256 625-895 5-280 (299)
16 4b99_A Mitogen-activated prote 100.0 6.1E-45 2.1E-49 411.9 23.9 262 625-895 54-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 3.1E-44 1.1E-48 401.8 21.0 264 622-895 18-353 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 1.4E-43 4.8E-48 420.5 24.1 252 625-895 157-411 (573)
19 3v5w_A G-protein coupled recep 100.0 1.1E-43 3.8E-48 417.2 19.7 247 625-895 189-450 (689)
20 2qkw_B Protein kinase; three-h 100.0 2.5E-43 8.4E-48 391.4 20.9 280 615-902 29-316 (321)
21 3uim_A Brassinosteroid insensi 100.0 3.5E-43 1.2E-47 391.0 21.3 286 607-898 12-308 (326)
22 3fxz_A Serine/threonine-protei 100.0 6.4E-42 2.2E-46 375.4 23.9 251 624-895 19-270 (297)
23 3kul_A Ephrin type-A receptor 100.0 9.2E-42 3.2E-46 379.1 24.4 263 625-905 49-317 (325)
24 2nru_A Interleukin-1 receptor- 100.0 6.1E-41 2.1E-45 369.5 29.6 281 611-901 11-306 (307)
25 3p86_A Serine/threonine-protei 100.0 1.2E-41 4.3E-46 375.2 23.6 263 623-903 35-300 (309)
26 2psq_A Fibroblast growth facto 100.0 4.6E-42 1.6E-46 388.4 20.4 263 624-904 80-367 (370)
27 3s95_A LIMK-1, LIM domain kina 100.0 8.9E-42 3.1E-46 376.8 21.5 268 625-904 10-285 (310)
28 2c30_A Serine/threonine-protei 100.0 4.1E-41 1.4E-45 373.3 25.3 262 613-895 23-295 (321)
29 3ugc_A Tyrosine-protein kinase 100.0 1.1E-41 3.7E-46 373.3 18.7 270 625-904 10-294 (295)
30 3fe3_A MAP/microtubule affinit 100.0 2.2E-41 7.7E-46 375.9 21.1 247 625-895 15-265 (328)
31 2qol_A Ephrin receptor; recept 100.0 2.3E-41 7.8E-46 382.9 21.4 261 625-903 45-311 (373)
32 4hcu_A Tyrosine-protein kinase 100.0 2.6E-41 8.9E-46 365.1 20.8 257 625-902 10-267 (269)
33 4eqm_A Protein kinase; transfe 100.0 6.5E-41 2.2E-45 366.9 24.1 262 625-903 11-277 (294)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.2E-41 1.4E-45 363.2 21.5 257 624-901 7-264 (268)
35 3vhe_A Vascular endothelial gr 100.0 2E-41 6.9E-46 382.1 19.6 272 614-902 11-356 (359)
36 3zgw_A Maternal embryonic leuc 100.0 2.6E-41 8.9E-46 377.5 20.2 250 624-895 9-261 (347)
37 3cbl_A C-FES, proto-oncogene t 100.0 1.6E-41 5.5E-46 385.3 17.6 261 623-902 112-375 (377)
38 3lb7_A RAF proto-oncogene seri 100.0 1.4E-40 4.8E-45 366.5 23.7 265 624-905 35-304 (307)
39 3soc_A Activin receptor type-2 100.0 4.4E-41 1.5E-45 373.3 19.6 266 624-902 23-319 (322)
40 1k9a_A Carboxyl-terminal SRC k 100.0 7.3E-41 2.5E-45 388.7 22.2 253 624-902 192-446 (450)
41 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-40 4.2E-45 367.1 22.9 264 625-911 8-273 (307)
42 1luf_A Muscle-specific tyrosin 100.0 3.8E-41 1.3E-45 377.3 18.9 268 619-904 41-338 (343)
43 2izr_A Casein kinase I isoform 100.0 1.7E-40 5.8E-45 370.0 23.9 268 625-905 9-285 (330)
44 1qcf_A Haematopoetic cell kina 100.0 3.2E-41 1.1E-45 392.3 18.5 263 620-903 183-446 (454)
45 3tki_A Serine/threonine-protei 100.0 9.3E-41 3.2E-45 370.6 21.0 253 625-895 7-262 (323)
46 3tt0_A Basic fibroblast growth 100.0 1.4E-40 4.7E-45 378.4 22.9 266 624-907 68-358 (382)
47 3gen_A Tyrosine-protein kinase 100.0 9E-41 3.1E-45 363.6 20.3 258 624-902 23-281 (283)
48 1o6l_A RAC-beta serine/threoni 100.0 1.5E-40 5.1E-45 370.3 22.3 248 625-895 5-261 (337)
49 2yab_A Death-associated protei 100.0 2.5E-40 8.7E-45 371.9 24.2 248 624-895 11-273 (361)
50 3dtc_A Mitogen-activated prote 100.0 1.6E-40 5.3E-45 359.3 21.7 253 625-899 7-271 (271)
51 3kmu_A ILK, integrin-linked ki 100.0 1.6E-40 5.4E-45 358.9 21.1 254 625-901 10-270 (271)
52 1csn_A Casein kinase-1; phosph 100.0 4E-40 1.4E-44 361.3 23.7 270 625-906 10-288 (298)
53 2ivs_A Proto-oncogene tyrosine 100.0 1.8E-40 6.2E-45 366.9 21.1 261 624-902 22-312 (314)
54 1t46_A HOMO sapiens V-KIT hard 100.0 2.2E-40 7.4E-45 366.1 21.5 264 624-904 22-310 (313)
55 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1E-40 3.4E-45 387.7 19.3 261 622-903 181-442 (452)
56 3op5_A Serine/threonine-protei 100.0 2E-40 6.9E-45 374.6 21.2 277 623-906 33-334 (364)
57 2y0a_A Death-associated protei 100.0 4.3E-40 1.5E-44 365.9 23.5 252 624-895 10-272 (326)
58 1tki_A Titin; serine kinase, m 100.0 3.1E-40 1.1E-44 365.9 22.3 251 625-895 5-258 (321)
59 3l9p_A Anaplastic lymphoma kin 100.0 8.7E-41 3E-45 377.6 18.1 260 625-902 71-346 (367)
60 1mp8_A Focal adhesion kinase 1 100.0 8.2E-41 2.8E-45 363.6 16.7 258 624-902 14-277 (281)
61 3poz_A Epidermal growth factor 100.0 2E-40 6.9E-45 368.8 20.2 258 625-902 15-279 (327)
62 1fot_A TPK1 delta, CAMP-depend 100.0 3.6E-40 1.2E-44 364.5 21.7 245 625-895 6-259 (318)
63 1rjb_A FL cytokine receptor; k 100.0 2.1E-40 7.1E-45 371.6 20.1 268 622-906 42-339 (344)
64 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-40 3.7E-45 391.6 18.1 259 623-901 218-478 (495)
65 1qpc_A LCK kinase; alpha beta 100.0 1.7E-40 5.9E-45 360.6 18.3 262 623-905 11-273 (279)
66 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.7E-40 6E-45 372.2 18.9 250 623-895 21-281 (353)
67 3kfa_A Tyrosine-protein kinase 100.0 1.2E-40 4.2E-45 363.4 16.9 261 622-902 10-272 (288)
68 2i1m_A Macrophage colony-stimu 100.0 1.2E-40 4E-45 371.8 17.0 266 620-902 41-327 (333)
69 1kob_A Twitchin; kinase, intra 100.0 6.9E-40 2.4E-44 371.7 23.4 252 625-895 51-305 (387)
70 2bdw_A Hypothetical protein K1 100.0 6.1E-40 2.1E-44 369.7 22.8 253 623-895 27-285 (362)
71 4aw2_A Serine/threonine-protei 100.0 1.5E-40 5.1E-45 382.1 17.7 265 615-895 64-339 (437)
72 3qup_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 366.3 20.1 265 622-904 20-301 (323)
73 3ork_A Serine/threonine protei 100.0 3.6E-40 1.2E-44 364.1 20.0 262 625-902 12-282 (311)
74 3gni_B Strad alpha; kinase fol 100.0 4.7E-40 1.6E-44 375.2 21.4 266 625-895 25-334 (389)
75 3t9t_A Tyrosine-protein kinase 100.0 4.7E-40 1.6E-44 354.6 20.2 256 625-901 8-264 (267)
76 3lxl_A Tyrosine-protein kinase 100.0 1.6E-40 5.3E-45 369.8 16.8 274 625-906 23-308 (327)
77 4dc2_A Protein kinase C IOTA t 100.0 3E-40 1E-44 374.6 19.4 257 625-895 52-319 (396)
78 3niz_A Rhodanese family protei 100.0 7.8E-40 2.7E-44 361.3 22.0 259 625-895 21-301 (311)
79 3og7_A AKAP9-BRAF fusion prote 100.0 6.2E-40 2.1E-44 358.2 20.9 261 624-901 23-288 (289)
80 4ecn_A Leucine-rich repeat pro 100.0 1.1E-39 3.7E-44 401.8 25.5 337 35-388 265-766 (876)
81 2xir_A Vascular endothelial gr 100.0 4.3E-40 1.5E-44 364.2 19.8 272 615-903 17-312 (316)
82 4fvq_A Tyrosine-protein kinase 100.0 1.8E-40 6.1E-45 362.4 16.4 251 625-901 8-275 (289)
83 3q4u_A Activin receptor type-1 100.0 3.4E-40 1.2E-44 362.3 18.7 256 624-899 7-300 (301)
84 1ob3_A PFPK5, cell division co 100.0 7E-40 2.4E-44 357.6 20.8 259 625-895 2-281 (288)
85 2pvf_A Fibroblast growth facto 100.0 8.3E-40 2.9E-44 365.1 21.7 266 623-906 33-323 (334)
86 1mqb_A Ephrin type-A receptor 100.0 1.1E-39 3.8E-44 363.7 22.7 261 626-904 45-312 (333)
87 4euu_A Serine/threonine-protei 100.0 2E-39 6.8E-44 359.6 24.5 265 625-900 9-308 (319)
88 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.9E-40 2E-44 367.7 20.4 245 625-895 41-294 (350)
89 3lxp_A Non-receptor tyrosine-p 100.0 6.4E-40 2.2E-44 363.3 20.4 271 626-906 32-315 (318)
90 2w4o_A Calcium/calmodulin-depe 100.0 7.1E-40 2.4E-44 367.5 20.8 251 624-895 52-306 (349)
91 3soa_A Calcium/calmodulin-depe 100.0 1.5E-39 5.1E-44 375.2 23.9 254 623-895 9-268 (444)
92 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.8E-40 6.3E-45 369.2 15.6 246 625-895 9-259 (336)
93 3c0i_A Peripheral plasma membr 100.0 6.9E-40 2.3E-44 368.1 20.1 250 624-895 23-287 (351)
94 4e5w_A Tyrosine-protein kinase 100.0 4.2E-40 1.4E-44 361.9 18.0 269 625-901 21-302 (302)
95 4f0f_A Serine/threonine-protei 100.0 1E-39 3.5E-44 356.1 20.7 253 625-899 19-287 (287)
96 3c1x_A Hepatocyte growth facto 100.0 4.5E-40 1.5E-44 372.0 18.4 265 626-907 90-361 (373)
97 3a8x_A Protein kinase C IOTA t 100.0 8.3E-40 2.9E-44 365.9 20.4 257 625-895 9-276 (345)
98 3kex_A Receptor tyrosine-prote 100.0 2.8E-40 9.7E-45 367.4 15.9 258 625-902 13-277 (325)
99 1u59_A Tyrosine-protein kinase 100.0 1.5E-39 5E-44 354.9 21.3 261 626-905 10-276 (287)
100 1xjd_A Protein kinase C, theta 100.0 3.8E-40 1.3E-44 368.1 17.0 250 622-894 14-269 (345)
101 3llt_A Serine/threonine kinase 100.0 6.4E-40 2.2E-44 370.0 19.0 271 610-895 20-356 (360)
102 2zv2_A Calcium/calmodulin-depe 100.0 8E-40 2.7E-44 359.0 19.1 249 625-895 13-293 (298)
103 4fr4_A YANK1, serine/threonine 100.0 7.1E-40 2.4E-44 370.3 19.3 247 625-894 15-271 (384)
104 3o0g_A Cell division protein k 100.0 2.1E-39 7E-44 354.7 22.3 259 625-895 2-283 (292)
105 3a62_A Ribosomal protein S6 ki 100.0 1.5E-39 5.2E-44 361.6 21.5 248 625-895 17-277 (327)
106 2jii_A Serine/threonine-protei 100.0 3.7E-40 1.2E-44 370.8 16.6 271 625-906 42-341 (352)
107 3f66_A Hepatocyte growth facto 100.0 1.4E-39 4.9E-44 356.9 20.8 265 625-906 25-296 (298)
108 2x4f_A Myosin light chain kina 100.0 1E-39 3.5E-44 369.3 20.0 247 630-895 94-343 (373)
109 3v8s_A RHO-associated protein 100.0 3.2E-40 1.1E-44 376.4 15.7 260 617-895 61-330 (410)
110 2pmi_A Negative RE, cyclin-dep 100.0 1.3E-39 4.6E-44 360.5 20.2 261 624-895 4-294 (317)
111 3qd2_B Eukaryotic translation 100.0 1E-39 3.4E-44 363.7 19.3 257 624-895 5-326 (332)
112 3g33_A Cell division protein k 100.0 1.9E-39 6.5E-44 357.8 21.2 261 623-895 7-297 (308)
113 3rgz_A Protein brassinosteroid 100.0 6E-40 2E-44 406.7 19.2 339 31-388 4-356 (768)
114 1ogq_A PGIP-2, polygalacturona 100.0 1E-39 3.4E-44 360.5 18.8 295 35-364 2-302 (313)
115 1p4o_A Insulin-like growth fac 100.0 3.9E-40 1.3E-44 365.7 15.5 269 615-901 15-299 (322)
116 2i0e_A Protein kinase C-beta I 100.0 1.5E-39 5.3E-44 364.3 20.4 250 623-895 18-277 (353)
117 3brb_A Proto-oncogene tyrosine 100.0 8.6E-40 2.9E-44 361.4 18.0 270 618-905 27-312 (313)
118 2h8h_A Proto-oncogene tyrosine 100.0 4E-40 1.4E-44 390.3 16.4 261 622-903 264-525 (535)
119 3f3z_A Calcium/calmodulin-depe 100.0 3.1E-39 1.1E-43 350.3 22.0 247 624-895 8-262 (277)
120 3cc6_A Protein tyrosine kinase 100.0 2.3E-39 7.9E-44 352.1 21.0 258 624-902 11-274 (281)
121 3lm5_A Serine/threonine-protei 100.0 2.4E-39 8.1E-44 360.2 21.4 265 613-895 16-288 (327)
122 2eue_A Carbon catabolite derep 100.0 2.6E-39 8.8E-44 350.6 21.1 246 625-895 13-263 (275)
123 3dbq_A Dual specificity protei 100.0 1.4E-39 4.7E-44 364.7 19.6 253 625-897 9-276 (343)
124 1xbb_A Tyrosine-protein kinase 100.0 1.3E-39 4.6E-44 356.0 18.8 261 624-904 15-282 (291)
125 3mdy_A Bone morphogenetic prot 100.0 9.3E-39 3.2E-43 356.9 25.9 269 615-903 27-333 (337)
126 2ozo_A Tyrosine-protein kinase 100.0 2.9E-39 9.8E-44 388.4 23.3 254 632-904 343-601 (613)
127 2vd5_A DMPK protein; serine/th 100.0 5E-40 1.7E-44 375.1 15.9 264 615-895 51-328 (412)
128 1byg_A CSK, protein (C-termina 100.0 8.5E-40 2.9E-44 355.0 16.8 252 625-902 21-274 (278)
129 3hko_A Calcium/calmodulin-depe 100.0 2.9E-39 9.9E-44 362.4 21.7 263 620-895 21-331 (345)
130 3pls_A Macrophage-stimulating 100.0 3.1E-39 1.1E-43 354.1 21.4 266 626-907 22-293 (298)
131 2v62_A Serine/threonine-protei 100.0 9.7E-40 3.3E-44 366.2 17.6 269 625-901 37-328 (345)
132 3fdn_A Serine/threonine-protei 100.0 3E-39 1E-43 350.8 20.9 247 624-895 8-258 (279)
133 2a2a_A Death-associated protei 100.0 5E-39 1.7E-43 356.7 23.1 248 624-895 11-273 (321)
134 1u5q_A Serine/threonine protei 100.0 1.6E-39 5.5E-44 364.2 19.3 247 625-896 54-307 (348)
135 2ac3_A MAP kinase-interacting 100.0 1.2E-39 3.9E-44 360.9 17.9 266 625-895 12-296 (316)
136 2acx_A G protein-coupled recep 100.0 1E-39 3.4E-44 383.9 18.0 252 624-895 183-445 (576)
137 2h34_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 355.6 21.3 262 624-904 33-299 (309)
138 3lzb_A Epidermal growth factor 100.0 1.1E-39 3.8E-44 362.7 17.2 258 625-902 15-279 (327)
139 3kk8_A Calcium/calmodulin depe 100.0 6.3E-39 2.2E-43 349.2 22.8 252 624-895 5-262 (284)
140 4ejn_A RAC-alpha serine/threon 100.0 1.5E-39 5.2E-44 377.6 18.7 248 625-895 148-405 (446)
141 3p1a_A MYT1 kinase, membrane-a 100.0 1.6E-39 5.5E-44 358.8 18.0 246 624-895 56-305 (311)
142 3uzp_A CKI-delta, CKID, casein 100.0 1.9E-38 6.5E-43 347.5 26.2 267 625-906 9-285 (296)
143 2a19_B Interferon-induced, dou 100.0 1.2E-39 4.2E-44 354.6 16.6 252 623-904 9-277 (284)
144 2wqm_A Serine/threonine-protei 100.0 6.4E-39 2.2E-43 353.9 22.5 262 625-905 32-301 (310)
145 3uc3_A Serine/threonine-protei 100.0 2.5E-39 8.4E-44 364.8 18.9 250 624-895 19-275 (361)
146 4hgt_A Casein kinase I isoform 100.0 1.4E-38 4.7E-43 348.6 24.1 271 623-905 7-284 (296)
147 1fvr_A Tyrosine-protein kinase 100.0 5.3E-39 1.8E-43 357.4 21.1 259 625-904 25-303 (327)
148 2w1i_A JAK2; chromosomal rearr 100.0 2.1E-39 7.1E-44 360.6 17.7 268 625-902 41-323 (326)
149 2y94_A 5'-AMP-activated protei 100.0 2.3E-39 7.9E-44 376.0 18.8 247 625-895 16-267 (476)
150 2zmd_A Dual specificity protei 100.0 3.6E-39 1.2E-43 367.2 20.0 252 625-896 56-322 (390)
151 4eco_A Uncharacterized protein 100.0 2.7E-39 9.1E-44 391.9 19.9 361 36-416 27-526 (636)
152 4fl3_A Tyrosine-protein kinase 100.0 5.2E-39 1.8E-43 387.1 22.1 252 631-902 375-632 (635)
153 1nxk_A MAP kinase-activated pr 100.0 4.4E-39 1.5E-43 367.6 20.4 249 626-896 62-323 (400)
154 4agu_A Cyclin-dependent kinase 100.0 6.6E-39 2.2E-43 354.0 20.9 259 625-895 3-285 (311)
155 2r5t_A Serine/threonine-protei 100.0 2.9E-39 9.9E-44 364.7 18.1 247 625-894 38-289 (373)
156 3is5_A Calcium-dependent prote 100.0 6E-39 2E-43 349.7 19.6 251 625-895 22-279 (285)
157 3g2f_A Bone morphogenetic prot 100.0 6.9E-39 2.4E-43 357.9 20.7 273 625-908 13-325 (336)
158 3ttj_A Mitogen-activated prote 100.0 6.2E-39 2.1E-43 373.0 20.9 255 625-895 62-356 (464)
159 2rku_A Serine/threonine-protei 100.0 2.4E-38 8.3E-43 346.5 24.0 248 625-895 15-266 (294)
160 2buj_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 353.1 21.6 269 624-904 28-309 (317)
161 2yex_A Serine/threonine-protei 100.0 6E-39 2E-43 347.7 18.8 254 624-895 6-262 (276)
162 3cok_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 349.7 17.3 249 625-895 11-263 (278)
163 2yfx_A Tyrosine-protein kinase 100.0 7.6E-39 2.6E-43 356.2 20.0 260 624-901 29-304 (327)
164 2owb_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 353.8 23.5 248 625-895 41-292 (335)
165 4eut_A Serine/threonine-protei 100.0 8.7E-39 3E-43 365.3 20.9 266 625-902 9-310 (396)
166 1t4h_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 347.1 22.2 249 626-895 27-283 (290)
167 3dls_A PAS domain-containing s 100.0 2.7E-39 9.3E-44 360.6 16.3 243 623-895 22-275 (335)
168 3bhy_A Death-associated protei 100.0 1.5E-38 5.2E-43 345.9 21.6 256 625-900 5-273 (283)
169 2clq_A Mitogen-activated prote 100.0 1.6E-38 5.4E-43 348.0 21.8 251 627-895 24-279 (295)
170 3oz6_A Mitogen-activated prote 100.0 1.2E-38 4.2E-43 363.3 21.1 266 623-895 7-329 (388)
171 3sv0_A Casein kinase I-like; t 100.0 1.4E-38 5E-43 370.0 22.1 267 625-903 7-280 (483)
172 2jam_A Calcium/calmodulin-depe 100.0 1.1E-38 3.9E-43 350.9 20.0 251 624-895 8-262 (304)
173 1x8b_A WEE1HU, WEE1-like prote 100.0 7.7E-39 2.6E-43 348.9 18.4 246 623-895 9-280 (289)
174 2vgo_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43 347.1 19.8 246 625-895 14-263 (284)
175 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.7E-39 2.3E-43 356.9 17.9 259 624-895 33-319 (329)
176 3ll6_A Cyclin G-associated kin 100.0 4.7E-39 1.6E-43 359.1 16.7 266 624-905 27-312 (337)
177 3kn6_A Ribosomal protein S6 ki 100.0 2.3E-39 7.7E-44 359.8 14.0 241 630-895 16-271 (325)
178 3gxj_A TGF-beta receptor type- 100.0 6.9E-40 2.4E-44 360.2 9.4 258 625-901 3-297 (303)
179 2r3i_A Cell division protein k 100.0 2.8E-38 9.7E-43 346.7 22.0 260 625-895 3-284 (299)
180 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.6E-39 2.6E-43 375.7 18.5 250 625-894 185-448 (543)
181 1ua2_A CAK, cell division prot 100.0 2.1E-38 7.2E-43 355.4 21.3 261 623-895 8-292 (346)
182 3eqc_A Dual specificity mitoge 100.0 1.1E-38 3.9E-43 359.8 19.2 257 625-895 33-325 (360)
183 3mtl_A Cell division protein k 100.0 5.1E-39 1.8E-43 357.0 15.9 259 625-895 2-282 (324)
184 1b6c_B TGF-B superfamily recep 100.0 5.8E-38 2E-42 351.3 24.5 271 615-903 32-338 (342)
185 3a7i_A MST3 kinase, serine/thr 100.0 2.9E-38 1E-42 347.4 21.7 249 625-896 22-272 (303)
186 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-38 3.9E-43 356.2 18.6 251 623-895 20-278 (342)
187 2j7t_A Serine/threonine-protei 100.0 1E-38 3.6E-43 350.7 17.9 253 624-895 18-276 (302)
188 1cm8_A Phosphorylated MAP kina 100.0 1.3E-38 4.3E-43 359.8 18.9 254 625-895 25-308 (367)
189 2y7j_A Phosphorylase B kinase 100.0 8.8E-38 3E-42 352.7 25.7 259 617-895 86-360 (365)
190 1vzo_A Ribosomal protein S6 ki 100.0 4.3E-39 1.5E-43 362.2 14.9 250 625-895 54-322 (355)
191 2wtk_C Serine/threonine-protei 100.0 9.4E-38 3.2E-42 343.6 25.3 252 624-895 4-264 (305)
192 2h6d_A 5'-AMP-activated protei 100.0 1.2E-38 4E-43 345.5 17.8 247 625-895 11-262 (276)
193 3kvw_A DYRK2, dual specificity 100.0 2.9E-38 9.8E-43 364.3 21.9 256 625-895 97-409 (429)
194 2w5a_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43 347.1 16.5 255 625-896 6-269 (279)
195 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3E-38 1E-42 357.0 21.6 256 623-904 63-342 (365)
196 2x7f_A TRAF2 and NCK-interacti 100.0 7.5E-39 2.6E-43 356.0 16.2 262 614-895 13-287 (326)
197 1u46_A ACK-1, activated CDC42 100.0 8E-39 2.7E-43 349.6 15.8 259 625-901 18-284 (291)
198 2xrw_A Mitogen-activated prote 100.0 6.3E-38 2.1E-42 355.0 23.0 255 625-895 25-319 (371)
199 3byv_A Rhoptry kinase; malaria 100.0 1.8E-39 6.2E-44 368.5 10.3 242 624-895 72-360 (377)
200 3fme_A Dual specificity mitoge 100.0 2E-38 6.8E-43 346.2 18.2 252 624-895 6-267 (290)
201 3i6u_A CDS1, serine/threonine- 100.0 2.5E-38 8.5E-43 363.9 19.7 250 622-895 132-400 (419)
202 3com_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 347.8 20.8 252 623-895 27-279 (314)
203 2vwi_A Serine/threonine-protei 100.0 9E-39 3.1E-43 351.2 14.7 267 623-895 13-288 (303)
204 4aaa_A Cyclin-dependent kinase 100.0 1.4E-38 4.7E-43 354.7 16.3 259 625-895 25-307 (331)
205 3an0_A Dual specificity mitoge 100.0 2E-38 6.8E-43 354.8 17.6 251 624-895 50-311 (340)
206 3rp9_A Mitogen-activated prote 100.0 2.7E-38 9.2E-43 368.6 19.2 265 625-895 53-397 (458)
207 3eb0_A Putative uncharacterize 100.0 2.9E-38 1E-42 359.4 18.6 259 621-895 3-322 (383)
208 1z57_A Dual specificity protei 100.0 1.2E-37 4.1E-42 347.9 23.1 256 625-895 14-329 (339)
209 3pg1_A Mitogen-activated prote 100.0 2.1E-38 7.3E-43 357.9 17.0 267 616-895 13-317 (362)
210 1phk_A Phosphorylase kinase; g 100.0 9.8E-38 3.3E-42 342.3 21.8 251 624-894 16-283 (298)
211 3nsz_A CK II alpha, casein kin 100.0 9.6E-38 3.3E-42 347.7 21.7 252 625-895 36-320 (330)
212 3n9x_A Phosphotransferase; mal 100.0 7.3E-38 2.5E-42 361.6 21.3 203 625-833 26-252 (432)
213 3lij_A Calcium/calmodulin depe 100.0 6.8E-38 2.3E-42 368.5 21.3 251 624-895 36-292 (494)
214 3nyv_A Calmodulin-domain prote 100.0 4E-38 1.4E-42 369.8 19.3 251 624-895 25-282 (484)
215 3mi9_A Cell division protein k 100.0 7.4E-38 2.5E-42 351.9 20.2 263 625-895 17-312 (351)
216 1blx_A Cyclin-dependent kinase 100.0 8.8E-38 3E-42 347.3 20.5 261 623-895 9-297 (326)
217 3mwu_A Calmodulin-domain prote 100.0 6.6E-38 2.3E-42 367.9 20.3 252 623-895 20-277 (486)
218 1wak_A Serine/threonine-protei 100.0 1E-37 3.4E-42 356.8 20.8 256 625-895 37-392 (397)
219 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-37 5.5E-42 366.2 23.1 251 624-895 35-302 (504)
220 2fst_X Mitogen-activated prote 100.0 3.9E-38 1.3E-42 355.5 16.9 254 625-895 29-312 (367)
221 2ycf_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 345.6 20.6 253 623-895 8-275 (322)
222 2i6l_A Mitogen-activated prote 100.0 7.4E-38 2.5E-42 346.7 18.7 260 625-895 11-306 (320)
223 2j0j_A Focal adhesion kinase 1 100.0 1.2E-37 4E-42 376.7 21.9 260 622-902 387-652 (656)
224 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-38 9.6E-43 383.3 16.4 250 623-895 339-598 (674)
225 2pml_X PFPK7, Ser/Thr protein 100.0 2.3E-38 7.9E-43 355.5 14.3 258 625-895 31-323 (348)
226 3qyz_A Mitogen-activated prote 100.0 1.3E-37 4.5E-42 351.6 19.7 260 625-895 27-314 (364)
227 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-38 4.2E-43 353.1 11.0 265 622-904 30-305 (319)
228 2vx3_A Dual specificity tyrosi 100.0 4.6E-37 1.6E-41 349.4 24.2 258 623-895 52-373 (382)
229 1zy4_A Serine/threonine-protei 100.0 2.4E-37 8.2E-42 339.7 21.1 258 624-895 5-284 (303)
230 4exu_A Mitogen-activated prote 100.0 2E-37 6.7E-42 350.9 20.5 253 625-895 42-324 (371)
231 1j1b_A Glycogen synthase kinas 100.0 1.1E-37 3.8E-42 358.5 18.7 254 626-895 55-337 (420)
232 3cek_A Dual specificity protei 100.0 1.5E-37 5.2E-42 343.4 18.6 256 620-895 23-293 (313)
233 3q60_A ROP5B; pseudokinase, tr 100.0 4.1E-38 1.4E-42 356.7 13.8 253 625-895 62-353 (371)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 2.2E-37 7.6E-42 348.2 19.6 264 625-895 11-306 (353)
235 2eu9_A Dual specificity protei 100.0 5.7E-37 1.9E-41 344.9 22.7 256 625-895 19-334 (355)
236 3e3p_A Protein kinase, putativ 100.0 2.9E-37 9.8E-42 348.3 20.0 265 618-895 16-315 (360)
237 1q8y_A SR protein kinase; tran 100.0 2.5E-37 8.5E-42 350.5 18.9 256 625-895 19-334 (373)
238 4e7w_A Glycogen synthase kinas 100.0 1.9E-37 6.4E-42 353.7 17.8 256 625-895 40-322 (394)
239 3coi_A Mitogen-activated prote 100.0 3.9E-37 1.3E-41 346.2 19.6 253 625-895 24-306 (353)
240 3rgf_A Cyclin-dependent kinase 100.0 4.6E-37 1.6E-41 352.2 19.1 259 627-895 22-334 (405)
241 2iwi_A Serine/threonine-protei 100.0 2E-37 6.8E-42 342.3 15.5 246 619-895 25-284 (312)
242 2wei_A Calmodulin-domain prote 100.0 6.1E-37 2.1E-41 334.1 19.1 253 622-895 19-277 (287)
243 3aln_A Dual specificity mitoge 100.0 4.5E-37 1.5E-41 341.9 17.6 250 625-895 22-286 (327)
244 3fhr_A MAP kinase-activated pr 100.0 5.2E-37 1.8E-41 342.5 17.0 253 624-895 27-288 (336)
245 2id5_A Lingo-1, leucine rich r 100.0 2.3E-36 8E-41 354.4 22.8 323 66-395 8-340 (477)
246 3a99_A Proto-oncogene serine/t 100.0 2.1E-37 7.1E-42 343.4 11.8 244 621-895 39-294 (320)
247 2rio_A Serine/threonine-protei 100.0 1.8E-36 6.2E-41 350.0 19.5 254 626-895 16-296 (434)
248 2dyl_A Dual specificity mitoge 100.0 1.7E-36 5.7E-41 335.7 17.4 251 625-895 25-284 (318)
249 3p23_A Serine/threonine-protei 100.0 2.5E-36 8.6E-41 347.8 18.3 251 625-895 24-284 (432)
250 3v47_A TOLL-like receptor 5B a 100.0 2.3E-36 7.7E-41 352.3 17.8 370 65-444 6-438 (455)
251 3qa8_A MGC80376 protein; kinas 100.0 1.7E-36 5.9E-41 359.5 12.8 266 625-901 14-309 (676)
252 3j0a_A TOLL-like receptor 5; m 100.0 4.9E-35 1.7E-39 366.5 26.7 361 84-445 22-593 (844)
253 3vq2_A TLR4, TOLL-like recepto 100.0 2E-35 6.8E-40 357.3 22.4 366 72-447 14-592 (606)
254 3dzo_A Rhoptry kinase domain; 100.0 4.9E-36 1.7E-40 344.1 15.7 239 626-894 79-363 (413)
255 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5E-35 1.7E-39 350.2 24.3 332 85-432 51-527 (562)
256 3uqc_A Probable conserved tran 100.0 2.4E-35 8.3E-40 320.9 16.6 229 625-902 31-266 (286)
257 2z7x_B TOLL-like receptor 1, v 100.0 5.2E-35 1.8E-39 346.8 19.4 343 86-445 21-512 (520)
258 3o6n_A APL1; leucine-rich repe 100.0 1.1E-34 3.7E-39 331.0 20.3 360 58-443 3-378 (390)
259 3m2w_A MAP kinase-activated pr 100.0 1.1E-34 3.8E-39 318.2 19.5 226 626-895 18-257 (299)
260 3rgz_A Protein brassinosteroid 100.0 8.9E-35 3.1E-39 360.3 20.2 322 87-419 319-743 (768)
261 2pzi_A Probable serine/threoni 100.0 3.8E-35 1.3E-39 358.3 16.4 240 625-901 80-328 (681)
262 3t6q_A CD180 antigen; protein- 100.0 2.3E-34 7.9E-39 348.0 22.1 327 87-447 255-594 (606)
263 2z81_A CD282 antigen, TOLL-lik 100.0 6.3E-35 2.2E-39 348.6 15.9 369 68-443 3-539 (549)
264 3oja_B Anopheles plasmodium-re 100.0 5.7E-34 1.9E-38 343.1 22.3 362 56-443 7-384 (597)
265 4g8a_A TOLL-like receptor 4; l 100.0 7.2E-34 2.5E-38 345.3 22.9 367 72-447 34-614 (635)
266 2vuw_A Serine/threonine-protei 100.0 3.9E-35 1.3E-39 327.5 7.1 244 624-895 19-332 (336)
267 1ziw_A TOLL-like receptor 3; i 100.0 2E-32 6.8E-37 335.7 26.4 351 87-447 273-658 (680)
268 2z63_A TOLL-like receptor 4, v 100.0 4E-33 1.4E-37 334.6 17.7 352 85-445 27-562 (570)
269 4eco_A Uncharacterized protein 100.0 2.4E-32 8.1E-37 331.0 21.4 313 85-417 248-601 (636)
270 3vq2_A TLR4, TOLL-like recepto 100.0 8E-32 2.7E-36 325.7 23.8 215 198-421 369-589 (606)
271 2z7x_B TOLL-like receptor 1, v 100.0 3.4E-32 1.1E-36 322.7 19.7 320 85-421 44-511 (520)
272 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.4E-32 2.9E-36 322.3 21.2 300 85-398 75-520 (562)
273 4fcg_A Uncharacterized protein 100.0 2.6E-32 8.8E-37 303.0 14.5 288 35-367 23-315 (328)
274 4ecn_A Leucine-rich repeat pro 100.0 1.6E-31 5.3E-36 329.3 21.4 253 85-346 490-774 (876)
275 3zyj_A Leucine-rich repeat-con 100.0 2.4E-31 8.2E-36 308.2 21.8 264 124-447 57-325 (440)
276 1ogq_A PGIP-2, polygalacturona 100.0 2.8E-32 9.7E-37 300.8 11.5 251 133-391 50-307 (313)
277 3t6q_A CD180 antigen; protein- 100.0 9.6E-31 3.3E-35 316.3 24.9 313 71-388 14-389 (606)
278 3j0a_A TOLL-like receptor 5; m 100.0 1.3E-30 4.6E-35 326.2 21.4 94 300-401 480-573 (844)
279 2z80_A TOLL-like receptor 2, v 100.0 2E-31 7E-36 299.5 12.1 277 134-445 53-345 (353)
280 3zyi_A Leucine-rich repeat-con 100.0 3E-30 1E-34 300.1 21.0 275 135-447 56-336 (452)
281 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-29 4.3E-34 310.7 26.3 321 66-387 1-365 (680)
282 3o6n_A APL1; leucine-rich repe 100.0 8.2E-30 2.8E-34 290.6 22.3 310 86-422 69-380 (390)
283 2z66_A Variable lymphocyte rec 100.0 2.2E-30 7.7E-35 284.9 16.1 257 134-447 29-295 (306)
284 2z63_A TOLL-like receptor 4, v 100.0 3.2E-30 1.1E-34 309.3 18.1 206 205-421 347-561 (570)
285 2id5_A Lingo-1, leucine rich r 100.0 6.1E-30 2.1E-34 299.8 19.8 299 85-389 55-357 (477)
286 2z81_A CD282 antigen, TOLL-lik 100.0 1.5E-29 5.2E-34 301.9 21.9 130 250-392 383-514 (549)
287 3v47_A TOLL-like receptor 5B a 100.0 6.2E-30 2.1E-34 297.8 18.0 314 89-416 13-384 (455)
288 4fmz_A Internalin; leucine ric 100.0 7.7E-29 2.6E-33 277.8 25.3 279 87-387 67-345 (347)
289 1xku_A Decorin; proteoglycan, 100.0 6.7E-29 2.3E-33 276.3 24.2 286 90-386 35-330 (330)
290 3oja_B Anopheles plasmodium-re 100.0 3.2E-29 1.1E-33 301.7 23.2 308 86-420 75-384 (597)
291 1xku_A Decorin; proteoglycan, 100.0 1.7E-28 5.7E-33 273.1 26.3 264 67-337 29-306 (330)
292 1o6v_A Internalin A; bacterial 100.0 2.1E-28 7.2E-33 285.6 26.8 302 86-417 68-389 (466)
293 2ft3_A Biglycan; proteoglycan, 100.0 8.4E-29 2.9E-33 275.7 22.2 287 88-386 35-331 (332)
294 4g8a_A TOLL-like receptor 4; l 100.0 4.7E-29 1.6E-33 302.9 21.6 331 85-422 75-612 (635)
295 2ft3_A Biglycan; proteoglycan, 100.0 1.6E-28 5.3E-33 273.5 22.8 264 111-388 34-307 (332)
296 4fmz_A Internalin; leucine ric 100.0 5.3E-28 1.8E-32 271.0 26.5 299 87-415 45-345 (347)
297 3bz5_A Internalin-J, INLJ; leu 100.0 1.3E-27 4.4E-32 277.2 28.1 232 87-341 43-281 (457)
298 1o6v_A Internalin A; bacterial 100.0 4.4E-27 1.5E-31 274.5 27.7 277 86-388 46-322 (466)
299 1ozn_A Reticulon 4 receptor; N 100.0 9.3E-28 3.2E-32 261.1 19.1 253 136-447 14-269 (285)
300 3zyi_A Leucine-rich repeat-con 99.9 3.3E-27 1.1E-31 274.4 21.7 203 134-337 76-279 (452)
301 4azs_A Methyltransferase WBDD; 99.9 1.6E-28 5.6E-33 291.3 9.7 183 633-831 242-436 (569)
302 3g06_A SSPH2 (leucine-rich rep 99.9 4.1E-27 1.4E-31 281.0 19.5 287 56-389 10-298 (622)
303 1wwl_A Monocyte differentiatio 99.9 2.2E-28 7.5E-33 269.7 6.5 243 87-338 44-310 (312)
304 1jl5_A Outer protein YOPM; leu 99.9 7.7E-26 2.6E-30 262.0 28.0 265 87-390 92-372 (454)
305 1jl5_A Outer protein YOPM; leu 99.9 1.6E-26 5.6E-31 267.6 21.3 287 85-416 10-310 (454)
306 4fcg_A Uncharacterized protein 99.9 1.5E-26 5.1E-31 256.6 20.0 232 86-337 81-314 (328)
307 3bz5_A Internalin-J, INLJ; leu 99.9 8.3E-26 2.9E-30 261.9 25.9 268 97-387 29-298 (457)
308 1wwl_A Monocyte differentiatio 99.9 4.2E-28 1.4E-32 267.5 5.2 246 107-389 40-310 (312)
309 1ozn_A Reticulon 4 receptor; N 99.9 4.2E-27 1.4E-31 256.0 10.8 253 89-346 14-270 (285)
310 2z66_A Variable lymphocyte rec 99.9 4.2E-26 1.4E-30 250.8 17.5 255 65-340 3-264 (306)
311 2z80_A TOLL-like receptor 2, v 99.9 1.4E-26 4.7E-31 260.1 13.3 273 66-341 27-318 (353)
312 2o6q_A Variable lymphocyte rec 99.9 1.6E-24 5.5E-29 233.5 23.3 183 159-392 39-222 (270)
313 3zyj_A Leucine-rich repeat-con 99.9 5.3E-25 1.8E-29 254.9 20.8 233 101-338 57-293 (440)
314 2z62_A TOLL-like receptor 4, v 99.9 2.5E-25 8.5E-30 240.7 16.8 218 122-341 19-241 (276)
315 3oja_A Leucine-rich immune mol 99.9 3.3E-26 1.1E-30 267.7 7.6 197 133-343 34-232 (487)
316 3en9_A Glycoprotease, O-sialog 99.9 4.1E-26 1.4E-30 269.1 8.2 194 625-834 336-539 (540)
317 2z62_A TOLL-like receptor 4, v 99.9 6.5E-25 2.2E-29 237.4 15.2 221 137-391 11-240 (276)
318 1p9a_G Platelet glycoprotein I 99.9 1.2E-24 4.2E-29 236.7 16.9 204 129-391 6-211 (290)
319 3o53_A Protein LRIM1, AGAP0063 99.9 1.2E-25 4.1E-30 248.3 8.9 237 130-385 31-272 (317)
320 3o53_A Protein LRIM1, AGAP0063 99.9 6.1E-26 2.1E-30 250.7 2.8 258 87-362 11-271 (317)
321 3oja_A Leucine-rich immune mol 99.9 3.2E-25 1.1E-29 259.3 7.0 234 110-361 34-270 (487)
322 1z7x_W Ribonuclease inhibitor; 99.9 7.2E-27 2.5E-31 272.4 -8.2 302 87-388 57-411 (461)
323 3g06_A SSPH2 (leucine-rich rep 99.9 2.2E-22 7.5E-27 240.2 28.7 259 110-417 40-298 (622)
324 1z7x_W Ribonuclease inhibitor; 99.9 3.5E-26 1.2E-30 266.6 -6.6 302 86-388 3-354 (461)
325 4glp_A Monocyte differentiatio 99.9 2.5E-23 8.5E-28 229.0 14.8 200 132-337 90-307 (310)
326 3rfs_A Internalin B, repeat mo 99.9 1.8E-23 6.2E-28 225.5 13.3 209 129-349 37-247 (272)
327 3rfs_A Internalin B, repeat mo 99.9 7.2E-23 2.4E-27 220.8 16.1 209 106-324 37-246 (272)
328 1p9a_G Platelet glycoprotein I 99.9 2.1E-22 7.2E-27 219.0 19.3 203 105-337 5-208 (290)
329 2o6q_A Variable lymphocyte rec 99.9 8.2E-22 2.8E-26 212.3 21.8 214 69-338 5-219 (270)
330 1zar_A RIO2 kinase; serine kin 99.9 9.9E-23 3.4E-27 220.2 11.2 153 618-807 83-253 (282)
331 4glp_A Monocyte differentiatio 99.9 1.6E-22 5.6E-27 222.5 12.0 222 134-389 65-308 (310)
332 3m19_A Variable lymphocyte rec 99.9 9.9E-22 3.4E-26 209.2 16.8 165 124-291 28-193 (251)
333 2ast_B S-phase kinase-associat 99.9 2.8E-24 9.6E-29 239.4 -3.4 263 69-344 37-313 (336)
334 1h6u_A Internalin H; cell adhe 99.9 1.2E-21 4.2E-26 215.1 15.7 195 129-338 37-231 (308)
335 2xwt_C Thyrotropin receptor; s 99.9 1.2E-21 4.2E-26 206.8 14.8 106 134-241 32-143 (239)
336 2xwt_C Thyrotropin receptor; s 99.9 9.7E-22 3.3E-26 207.6 13.8 195 111-311 32-237 (239)
337 2ca6_A RAN GTPase-activating p 99.9 1.1E-23 3.8E-28 239.4 -1.5 223 122-344 21-298 (386)
338 3m19_A Variable lymphocyte rec 99.9 8.5E-21 2.9E-25 202.0 18.2 179 134-339 15-194 (251)
339 4ay9_X Follicle-stimulating ho 99.9 3.6E-21 1.2E-25 215.5 16.0 247 136-395 12-265 (350)
340 3goz_A Leucine-rich repeat-con 99.9 7.6E-23 2.6E-27 230.3 2.0 258 91-368 3-299 (362)
341 3cvr_A Invasion plasmid antige 99.8 4.4E-21 1.5E-25 226.1 16.3 189 134-349 60-255 (571)
342 2o6s_A Variable lymphocyte rec 99.8 3.9E-21 1.3E-25 198.3 13.0 161 133-324 28-189 (208)
343 3goz_A Leucine-rich repeat-con 99.8 1.4E-22 4.7E-27 228.2 1.3 251 137-389 2-298 (362)
344 2ca6_A RAN GTPase-activating p 99.8 4.7E-23 1.6E-27 234.3 -2.6 240 102-341 24-320 (386)
345 1h6u_A Internalin H; cell adhe 99.8 5.5E-21 1.9E-25 209.9 13.7 195 107-315 38-232 (308)
346 4ay9_X Follicle-stimulating ho 99.8 1.3E-20 4.3E-25 211.0 16.4 246 66-336 6-258 (350)
347 2ast_B S-phase kinase-associat 99.8 4.4E-22 1.5E-26 221.7 -0.0 243 135-389 49-307 (336)
348 3cvr_A Invasion plasmid antige 99.8 4.5E-21 1.5E-25 226.0 8.6 212 57-325 32-255 (571)
349 2v9t_B SLIT homolog 2 protein 99.8 3.6E-20 1.2E-24 192.7 13.3 120 273-447 76-196 (220)
350 2v70_A SLIT-2, SLIT homolog 2 99.8 6.6E-20 2.2E-24 190.8 13.4 162 231-447 34-197 (220)
351 2xot_A Amphoterin-induced prot 99.8 1.8E-19 6E-24 202.6 9.8 79 160-241 21-100 (361)
352 2o6s_A Variable lymphocyte rec 99.8 1.2E-18 4E-23 179.7 14.9 158 182-347 29-188 (208)
353 1h6t_A Internalin B; cell adhe 99.8 2.9E-19 9.8E-24 194.4 10.4 172 130-338 43-214 (291)
354 3ogk_B Coronatine-insensitive 99.8 1.4E-20 4.7E-25 226.5 -1.2 295 87-388 165-526 (592)
355 1h6t_A Internalin B; cell adhe 99.8 8.3E-19 2.8E-23 190.8 12.6 191 160-370 27-217 (291)
356 1m9s_A Internalin B; cell inva 99.8 2.8E-19 9.7E-24 213.1 9.7 147 131-289 41-187 (605)
357 2v9t_B SLIT homolog 2 protein 99.8 1.5E-18 5.1E-23 180.5 12.7 133 133-290 32-165 (220)
358 3e6j_A Variable lymphocyte rec 99.8 3.4E-18 1.2E-22 179.0 14.8 142 124-293 33-175 (229)
359 4b8c_D Glucose-repressible alc 99.8 6.5E-20 2.2E-24 224.2 0.9 194 37-242 130-329 (727)
360 1zth_A RIO1 serine protein kin 99.8 1.2E-18 4.2E-23 185.8 10.5 136 627-776 49-219 (258)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-18 9.1E-23 178.6 12.7 133 135-292 34-168 (220)
362 1m9s_A Internalin B; cell inva 99.8 2.8E-18 9.6E-23 204.5 13.9 189 89-292 24-212 (605)
363 1dce_A Protein (RAB geranylger 99.7 1.8E-20 6.3E-25 222.1 -6.3 190 130-341 346-550 (567)
364 3e6j_A Variable lymphocyte rec 99.7 1.3E-17 4.5E-22 174.5 14.9 135 181-316 40-175 (229)
365 2xot_A Amphoterin-induced prot 99.7 3.9E-18 1.3E-22 191.6 11.5 179 136-338 21-203 (361)
366 3ogk_B Coronatine-insensitive 99.7 5E-20 1.7E-24 221.7 -4.3 295 87-387 139-500 (592)
367 4ezg_A Putative uncharacterize 99.7 1E-17 3.5E-22 171.0 10.7 154 129-290 40-194 (197)
368 1dce_A Protein (RAB geranylger 99.7 2.9E-20 1E-24 220.3 -9.5 204 106-331 345-567 (567)
369 1xeu_A Internalin C; cellular 99.7 4.1E-18 1.4E-22 182.3 7.9 169 109-291 18-186 (263)
370 1xeu_A Internalin C; cellular 99.7 5.1E-18 1.7E-22 181.6 8.0 170 132-339 18-187 (263)
371 2wfh_A SLIT homolog 2 protein 99.7 3.5E-17 1.2E-21 166.3 12.5 155 232-447 13-170 (193)
372 4ezg_A Putative uncharacterize 99.7 2.8E-17 9.5E-22 167.8 11.1 154 107-268 41-195 (197)
373 2p1m_B Transport inhibitor res 99.7 4.2E-19 1.4E-23 213.6 -7.8 244 87-332 106-405 (594)
374 1w8a_A SLIT protein; signaling 99.7 1E-16 3.6E-21 162.7 11.1 157 232-447 11-170 (192)
375 2p1m_B Transport inhibitor res 99.7 1.1E-18 3.8E-23 209.9 -4.5 294 86-387 130-518 (594)
376 4b8c_D Glucose-repressible alc 99.7 1.8E-17 6.3E-22 202.5 3.8 178 134-317 174-358 (727)
377 1w8a_A SLIT protein; signaling 99.6 3E-16 1E-20 159.3 10.2 109 134-242 30-139 (192)
378 2o6r_A Variable lymphocyte rec 99.6 1.5E-15 5.2E-20 151.9 12.0 110 133-242 28-137 (177)
379 4gyi_A RIO2 kinase; protein ki 99.6 2.1E-16 7.1E-21 174.8 4.8 135 625-774 95-263 (397)
380 2ell_A Acidic leucine-rich nuc 99.6 1E-15 3.4E-20 151.8 9.2 132 133-290 24-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.6 1.2E-15 4.1E-20 151.2 8.1 134 107-242 21-160 (168)
382 2wfh_A SLIT homolog 2 protein 99.6 6.5E-15 2.2E-19 149.5 12.2 109 133-242 31-139 (193)
383 2je0_A Acidic leucine-rich nuc 99.5 1.5E-15 5E-20 147.3 3.8 108 133-242 17-126 (149)
384 3sb4_A Hypothetical leucine ri 99.5 4.9E-15 1.7E-19 164.0 7.5 90 253-346 225-318 (329)
385 2o6r_A Variable lymphocyte rec 99.5 4.4E-14 1.5E-18 141.2 12.6 132 135-294 9-141 (177)
386 3sb4_A Hypothetical leucine ri 99.5 5.1E-15 1.8E-19 163.9 6.3 259 109-382 24-328 (329)
387 2je0_A Acidic leucine-rich nuc 99.5 2E-14 6.7E-19 139.3 8.4 112 124-237 33-148 (149)
388 4fdw_A Leucine rich hypothetic 99.5 1.8E-12 6E-17 146.8 20.6 261 109-387 112-382 (401)
389 1a9n_A U2A', U2A'; complex (nu 99.5 4.6E-14 1.6E-18 140.9 6.6 109 129-242 15-126 (176)
390 1ds9_A Outer arm dynein; leuci 99.5 2.3E-16 7.8E-21 161.1 -10.7 132 133-269 18-155 (198)
391 1a9n_A U2A', U2A'; complex (nu 99.4 9.1E-14 3.1E-18 138.8 6.1 134 104-242 13-153 (176)
392 1ds9_A Outer arm dynein; leuci 99.4 1.2E-15 4.1E-20 155.7 -7.8 110 128-242 43-153 (198)
393 4fdw_A Leucine rich hypothetic 99.4 1.8E-12 6.3E-17 146.7 17.2 256 97-369 123-386 (401)
394 3g39_A Variable lymphocyte rec 99.4 6.3E-13 2.2E-17 131.8 9.2 105 135-242 11-115 (170)
395 2r9u_A Variable lymphocyte rec 99.4 1.2E-12 4.2E-17 130.2 9.5 104 136-242 15-118 (174)
396 3g39_A Variable lymphocyte rec 99.3 2.5E-12 8.6E-17 127.4 9.8 86 133-218 30-115 (170)
397 2r9u_A Variable lymphocyte rec 99.3 2.8E-12 9.5E-17 127.6 9.9 94 123-218 25-118 (174)
398 3tm0_A Aminoglycoside 3'-phosp 99.3 6.6E-12 2.3E-16 133.9 10.1 144 623-774 12-212 (263)
399 2ifg_A High affinity nerve gro 99.2 1.7E-11 5.8E-16 136.6 9.4 12 66-77 4-16 (347)
400 3un9_A NLR family member X1; l 99.2 2.2E-13 7.7E-18 152.7 -6.7 47 300-346 211-261 (372)
401 2ifg_A High affinity nerve gro 99.2 3.5E-11 1.2E-15 134.0 9.4 103 137-242 12-116 (347)
402 3un9_A NLR family member X1; l 99.1 6.1E-13 2.1E-17 149.2 -6.5 171 132-323 71-262 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.1 8.3E-11 2.9E-15 125.0 7.6 131 632-775 26-214 (264)
404 4fs7_A Uncharacterized protein 99.0 5.2E-09 1.8E-13 118.5 18.7 199 175-385 156-376 (394)
405 3dxp_A Putative acyl-COA dehyd 99.0 7.9E-10 2.7E-14 123.6 9.4 142 630-776 43-249 (359)
406 3sg8_A APH(2'')-ID; antibiotic 98.9 1.3E-09 4.5E-14 118.7 8.1 192 630-833 25-287 (304)
407 4fs7_A Uncharacterized protein 98.9 2.2E-08 7.5E-13 113.4 17.2 266 102-385 63-353 (394)
408 2ra8_A Uncharacterized protein 98.8 1.2E-09 4E-14 121.4 2.6 188 133-340 107-323 (362)
409 2ra8_A Uncharacterized protein 98.8 1.5E-09 5.2E-14 120.5 2.5 184 127-335 133-341 (362)
410 4gt6_A Cell surface protein; l 98.7 2.6E-07 8.8E-12 104.5 19.8 267 105-387 58-369 (394)
411 4gt6_A Cell surface protein; l 98.6 7.8E-07 2.7E-11 100.5 18.0 283 88-387 66-390 (394)
412 3r70_A Aminoglycoside phosphot 98.6 2.4E-07 8.2E-12 101.5 12.9 137 626-776 38-238 (320)
413 3d1u_A Putative fructosamine-3 98.6 1.9E-07 6.5E-12 100.4 11.2 75 630-708 20-97 (288)
414 3rfe_A Platelet glycoprotein I 98.5 6.2E-08 2.1E-12 90.6 3.8 85 328-447 12-101 (130)
415 4gkh_A Aminoglycoside 3'-phosp 98.5 6.3E-07 2.1E-11 95.5 11.9 135 632-775 31-223 (272)
416 3tdw_A Gentamicin resistance p 98.5 1E-06 3.5E-11 95.8 13.7 136 630-775 24-224 (306)
417 1io0_A Tropomodulin; LRR prote 98.3 6.3E-08 2.2E-12 96.9 -1.2 91 128-218 31-136 (185)
418 1io0_A Tropomodulin; LRR prote 98.3 6.9E-08 2.4E-12 96.6 -1.0 92 151-242 30-136 (185)
419 3ovc_A Hygromycin-B 4-O-kinase 98.2 2.6E-06 9.1E-11 94.7 10.3 74 630-709 46-122 (362)
420 3ats_A Putative uncharacterize 98.2 9.7E-07 3.3E-11 98.2 6.5 79 631-709 26-121 (357)
421 4h09_A Hypothetical leucine ri 98.2 4E-05 1.4E-09 85.8 19.8 126 249-384 212-342 (379)
422 3rw6_A Nuclear RNA export fact 98.2 2.6E-07 8.9E-12 97.2 0.8 104 129-235 137-257 (267)
423 3rw6_A Nuclear RNA export fact 98.2 1.5E-07 5.2E-12 99.0 -1.8 7 70-76 79-85 (267)
424 4h09_A Hypothetical leucine ri 98.1 9.1E-05 3.1E-09 82.9 20.3 265 105-385 41-320 (379)
425 2olc_A MTR kinase, methylthior 98.0 1.4E-05 4.8E-10 90.2 9.9 75 630-706 35-120 (397)
426 3jr1_A Putative fructosamine-3 97.9 6.9E-05 2.4E-09 81.0 12.1 137 630-771 41-232 (312)
427 2q83_A YTAA protein; 2635576, 97.8 5E-05 1.7E-09 83.6 10.6 139 631-774 38-251 (346)
428 3f7w_A Putative fructosamine-3 97.8 8.4E-05 2.9E-09 79.7 11.9 76 629-708 19-97 (288)
429 2pyw_A Uncharacterized protein 97.6 0.00014 4.9E-09 82.5 10.2 73 630-705 39-122 (420)
430 3e4g_A ATP synthase subunit S, 97.6 1.7E-05 5.9E-10 77.3 2.1 83 133-215 61-149 (176)
431 3e4g_A ATP synthase subunit S, 97.5 1.4E-05 4.9E-10 77.9 0.6 84 157-240 61-150 (176)
432 3csv_A Aminoglycoside phosphot 97.3 0.00095 3.3E-08 73.0 12.3 141 631-776 24-218 (333)
433 2ppq_A HSK, HK, homoserine kin 97.2 0.0018 6.1E-08 70.4 12.8 157 615-774 7-216 (322)
434 1zyl_A Hypothetical protein YI 97.1 0.0022 7.6E-08 69.8 12.4 141 631-775 32-223 (328)
435 3feg_A Choline/ethanolamine ki 97.1 0.00074 2.5E-08 74.9 8.3 140 631-775 56-254 (379)
436 1nw1_A Choline kinase (49.2 KD 97.1 0.00069 2.4E-08 76.9 8.0 72 631-708 79-159 (429)
437 3dxq_A Choline/ethanolamine ki 97.1 0.001 3.5E-08 71.6 8.6 71 630-708 23-95 (301)
438 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00016 5.3E-09 71.9 1.5 66 129-194 37-111 (197)
439 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00011 3.7E-09 73.0 -0.3 62 177-238 66-135 (197)
440 2qg7_A Ethanolamine kinase PV0 96.9 0.002 6.7E-08 73.5 9.3 73 631-708 114-188 (458)
441 3i1a_A Spectinomycin phosphotr 96.7 0.0056 1.9E-07 67.1 10.5 66 636-708 34-108 (339)
442 3rfe_A Platelet glycoprotein I 96.6 0.0034 1.2E-07 58.1 7.0 57 280-337 11-68 (130)
443 3c5i_A Choline kinase; choline 96.5 0.0023 7.7E-08 71.2 6.1 73 631-708 39-121 (369)
444 2k1k_A Ephrin type-A receptor 96.4 0.0012 4.1E-08 45.8 1.6 32 554-585 4-35 (38)
445 3f2s_A CK, chetk-alpha, cholin 96.0 0.011 3.7E-07 65.8 8.2 140 631-774 58-279 (401)
446 2yle_A Protein spire homolog 1 96.0 0.021 7.1E-07 57.0 9.1 102 706-831 33-134 (229)
447 3mes_A Choline kinase; malaria 95.1 0.043 1.5E-06 61.7 8.7 73 631-708 76-157 (424)
448 2l2t_A Receptor tyrosine-prote 94.3 0.028 9.7E-07 40.0 2.8 32 559-590 8-39 (44)
449 2ks1_B Epidermal growth factor 93.8 0.052 1.8E-06 38.8 3.4 29 561-589 11-39 (44)
450 3g15_A CK, chetk-alpha, cholin 90.2 0.71 2.4E-05 51.4 9.3 29 747-775 246-280 (401)
451 2jwa_A Receptor tyrosine-prote 89.1 0.18 6.2E-06 35.9 2.0 28 561-589 12-39 (44)
452 4ann_A ESSB; membrane protein, 79.3 6.1 0.00021 39.2 8.7 115 679-834 43-158 (215)
453 3cxl_A N-chimerin; SH2, RHO-GA 76.7 0.29 1E-05 55.6 -2.0 61 629-692 146-215 (463)
454 4ano_A ESSB; membrane protein, 73.6 11 0.00036 37.6 8.6 114 679-834 48-163 (219)
455 2l34_A TYRO protein tyrosine k 70.5 2 6.8E-05 28.6 1.7 23 558-580 4-26 (33)
456 2ks1_B Epidermal growth factor 65.0 6.5 0.00022 28.1 3.5 34 561-594 8-41 (44)
457 2l2t_A Receptor tyrosine-prote 57.1 9.7 0.00033 27.1 3.3 36 560-595 6-41 (44)
458 1cja_A Protein (actin-fragmin 56.7 16 0.00053 38.8 6.3 132 634-775 78-237 (342)
459 2k9y_A Ephrin type-A receptor 56.1 3.6 0.00012 28.9 1.0 13 566-578 15-27 (41)
460 1iij_A ERBB-2 receptor protein 49.6 1.4 4.6E-05 29.7 -2.0 24 564-588 11-34 (35)
461 2klu_A T-cell surface glycopro 42.7 12 0.00042 28.8 2.0 21 566-586 12-32 (70)
462 3ls8_A Phosphatidylinositol 3- 33.6 1.9E+02 0.0066 33.3 11.1 83 684-774 402-501 (614)
463 3hhm_A Phosphatidylinositol-4, 31.8 1.6E+02 0.0054 36.5 10.5 60 707-774 899-961 (1091)
464 2x6h_A GH13170P, VPS34, phosph 31.4 2.9E+02 0.01 32.4 12.4 83 684-774 476-575 (696)
465 2knc_B Integrin beta-3; transm 30.6 28 0.00095 28.4 2.5 16 565-580 12-27 (79)
466 2lz0_A Uncharacterized protein 29.3 64 0.0022 27.4 4.8 37 151-188 14-50 (100)
467 2y3a_A Phosphatidylinositol-4, 27.3 1.4E+02 0.0047 37.1 9.0 25 750-774 940-964 (1092)
468 2jwa_A Receptor tyrosine-prote 25.2 82 0.0028 22.4 3.7 32 563-594 10-41 (44)
469 2k1k_A Ephrin type-A receptor 23.9 76 0.0026 21.8 3.3 30 559-588 5-35 (38)
470 2llm_A Amyloid beta A4 protein 28.3 18 0.00062 25.3 0.0 19 559-577 15-33 (43)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.4e-54 Score=467.21 Aligned_cols=263 Identities=30% Similarity=0.500 Sum_probs=221.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45667789999999999999874 477899999988777777889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCC-----------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEE
Q 002158 699 VYEFVPNGTLRDWLSGRT-----------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKV 767 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl 767 (958)
|||||++|+|.++|+... ...+++.++++++.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 999999999999997532 346999999999999999999999998 999999999999999999999
Q ss_pred eeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002158 768 ADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVA 846 (958)
Q Consensus 768 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~ 846 (958)
+|||+|+.....+. ........||++|||||++.+..|+.++|||||||++|||+| |+.||.+.... +....
T Consensus 170 ~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~- 242 (299)
T 4asz_A 170 GDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIEC- 242 (299)
T ss_dssp CCCSCHHHHTGGGC-----EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHH-
T ss_pred CCcccceecCCCCc-----eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH-
Confidence 99999986532221 122233569999999999999999999999999999999999 89999764432 21111
Q ss_pred hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 847 RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
+........|..+++++.+|+.+||+.||++|||++||++.|+++.+..|.
T Consensus 243 --------i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~ 293 (299)
T 4asz_A 243 --------ITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293 (299)
T ss_dssp --------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCC
T ss_pred --------HHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCc
Confidence 112223345677889999999999999999999999999999998876553
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.7e-53 Score=467.07 Aligned_cols=261 Identities=30% Similarity=0.481 Sum_probs=215.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+|...++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4556678999999999999874 4788999999887777778899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCC-------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeE
Q 002158 700 YEFVPNGTLRDWLSGRT-------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAK 766 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~k 766 (958)
||||++|+|.++++... ..++++.++++|+.|||+||+|||+++ ||||||||+|||+++++.+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEE
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEE
Confidence 99999999999997542 245999999999999999999999998 99999999999999999999
Q ss_pred EeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002158 767 VADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNV 845 (958)
Q Consensus 767 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~ 845 (958)
|+|||+|+.....+. ........||++|||||++.+..|+.++|||||||++|||+| |+.||.+...... +..
T Consensus 199 i~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~-~~~ 272 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-IDC 272 (329)
T ss_dssp ECCCC---------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH-HHH
T ss_pred EcccccceeccCCCc-----ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH-HHH
Confidence 999999986532221 122334679999999999999999999999999999999999 8999976543221 111
Q ss_pred HhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 846 ARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 846 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
. ........|..+++++.+|+.+||+.||++||||+||+++|+.+.+..|
T Consensus 273 i---------~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 273 I---------TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp H---------HHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred H---------HcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 1 1122234567788999999999999999999999999999999887654
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-52 Score=456.38 Aligned_cols=264 Identities=26% Similarity=0.466 Sum_probs=212.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+++...++||+|+||+||+|++++ .||||+++.. .....++|.+|++++++++|||||+++|+|.. +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 456778899999999999998753 6999998753 34456789999999999999999999999865 568999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
|++|+|.++|+... ..+++.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+.......
T Consensus 113 ~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~- 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG- 187 (307)
T ss_dssp CSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCc-
Confidence 99999999997543 35999999999999999999999998 99999999999999999999999999986543221
Q ss_pred CCccceeeeeccCCCCccChhhhcc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
........||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+............. +. ..+.
T Consensus 188 ----~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~-~~----~~p~ 258 (307)
T 3omv_A 188 ----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR-GY----ASPD 258 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHT-TC----CCCC
T ss_pred ----ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhc-CC----CCCC
Confidence 122345679999999999964 35889999999999999999999999765543332222211 11 1122
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
....+..++..+.+++.+||+.||++||||+||+++|+.+...+|.
T Consensus 259 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk 304 (307)
T 3omv_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence 2344667889999999999999999999999999999988766654
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1e-52 Score=459.18 Aligned_cols=255 Identities=28% Similarity=0.463 Sum_probs=212.8
Q ss_pred CCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 627 FSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+...+.||+|+||+||+|.+. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+||
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 344678999999999999973 46789999997643 33467899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 700 YEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
||||++|+|.++|+.+. ...+++.++++++.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCE
Confidence 99999999999996532 235899999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~ 844 (958)
||+|||+|+.....+. ........||++|||||++.++.|+.++|||||||++|||+| |+.||.+.... +...
T Consensus 185 Ki~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~~ 258 (308)
T 4gt4_A 185 KISDLGLFREVYAADY-----YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVVE 258 (308)
T ss_dssp EECCSCCBCGGGGGGC-----BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHHH
T ss_pred EECCcccceeccCCCc-----eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHHH
Confidence 9999999986543221 112234579999999999999999999999999999999999 89999765432 2221
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
.. ........|.+++..+.+|+.+||+.||++||||+||+++|+..
T Consensus 259 ~i---------~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 MI---------RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HH---------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HH---------HcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11 12223345778889999999999999999999999999999763
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1e-51 Score=455.33 Aligned_cols=251 Identities=23% Similarity=0.364 Sum_probs=209.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|+..+.||+|+||+||+|++. +|+.||||++... .....+.|.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 47888899999999999999986 6999999999764 33445679999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
||+||+|.++|..+....+++.++..++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999998766666899999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.... ..+... ......
T Consensus 179 -----~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i---------~~~~~~ 243 (350)
T 4b9d_A 179 -----VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKI---------ISGSFP 243 (350)
T ss_dssp -----HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHH---------HHTCCC
T ss_pred -----cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHH---------HcCCCC
Confidence 11234567999999999999999999999999999999999999999765432 222211 112223
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+..++.++.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 3455677889999999999999999999999875
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5e-51 Score=447.84 Aligned_cols=263 Identities=21% Similarity=0.288 Sum_probs=213.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+.|...++||+|+||+||+|+++ +|+.||||+++.... +.+|+.++++++|||||++++++.+++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45667788999999999999986 699999999976432 247999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-CeEEeeeeeecccccCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-NAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~~~~~~~ 782 (958)
+||+|.++++..+ .+++.++..++.|++.||+|||+++ ||||||||+|||++.++ .+||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999997643 4999999999999999999999999 99999999999999988 6999999999876432211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.. ......++||+.|||||++.+..|+.++|||||||++|||+||+.||.+............. . .....
T Consensus 208 ~~--~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~-~-------~~~~~ 277 (336)
T 4g3f_A 208 KS--LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE-P-------PPIRE 277 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS-C-------CGGGG
T ss_pred cc--eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC-C-------CCchh
Confidence 11 11223467999999999999999999999999999999999999999754321111111111 0 01123
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCCC
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPETD 907 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 907 (958)
.+..++..+.+++.+||+.||++|||++|++++|...+.....-.
T Consensus 278 ~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~ 322 (336)
T 4g3f_A 278 IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLK 322 (336)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSC
T ss_pred cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhcc
Confidence 456678899999999999999999999999999999887765443
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5.7e-51 Score=453.19 Aligned_cols=272 Identities=27% Similarity=0.431 Sum_probs=223.6
Q ss_pred ChHHHHHHHcCCCCCceeeeeCCeEEEEEEECC------CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCC-CCcceEE
Q 002158 616 KFKELAMATAYFSSSTQVGQGGYGKVYKGILSD------NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHH-RNLVSLL 687 (958)
Q Consensus 616 ~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H-~niv~l~ 687 (958)
...+++...++|...+.||+|+||+||+|.+.. ++.||||++.... ....++|.+|+++|++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 344566667889999999999999999999642 3689999997654 3445679999999999965 9999999
Q ss_pred EEEEeC-CeEEEEEEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCC
Q 002158 688 GYCDEE-GEQMLVYEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDI 752 (958)
Q Consensus 688 ~~~~~~-~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Di 752 (958)
|+|... +..++|||||++|+|.++|+... ...+++.+++.++.|||+||+|||+++ ||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCcc
Confidence 999764 56899999999999999997532 234899999999999999999999999 999999
Q ss_pred CccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCC
Q 002158 753 KASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQ 831 (958)
Q Consensus 753 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~ 831 (958)
||+|||+++++.+||+|||+|+....... ........||++|||||++.+..|+.++|||||||++|||+| |+.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~ 286 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCC-----ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCC
Confidence 99999999999999999999986533221 223345679999999999999999999999999999999998 999
Q ss_pred CCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 832 PISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 832 P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
||.+............ .......|..+++++.+++.+||+.||++|||++||+++|+++++.-.
T Consensus 287 Pf~~~~~~~~~~~~i~---------~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 287 PYPGVKIDEEFCRRLK---------EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp SSTTCCCSHHHHHHHH---------HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHH---------cCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 9976443222222111 112234466778899999999999999999999999999999887543
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.1e-51 Score=447.01 Aligned_cols=250 Identities=22% Similarity=0.359 Sum_probs=211.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
..|+..++||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45778889999999999999986 69999999997654445567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++|+|.+++... .+++.++..++.|++.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+....
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--- 224 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 224 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC---
Confidence 999999999753 3999999999999999999999999 9999999999999999999999999998653221
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+...... ........ .. ....
T Consensus 225 ----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~~~------~~-~~~~ 292 (346)
T 4fih_A 225 ----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNL------PP-RLKN 292 (346)
T ss_dssp ----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSS------CC-CCSC
T ss_pred ----CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCC------CC-CCCc
Confidence 123456899999999999999999999999999999999999999976543322 22211110 00 0122
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+..++.++.+++.+||+.||++|||++|++++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 34567889999999999999999999999864
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-50 Score=435.12 Aligned_cols=247 Identities=25% Similarity=0.456 Sum_probs=201.9
Q ss_pred CCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe----CCeEEEEE
Q 002158 628 SSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE----EGEQMLVY 700 (958)
Q Consensus 628 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lV~ 700 (958)
...+.||+|+||+||+|.+. +++.||||++... .....++|.+|++++++++|||||++++++.+ ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 34567999999999999986 6899999998653 34445679999999999999999999999865 34689999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeeeeecccccC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~~~ 779 (958)
|||++|+|.++++... .+++..+..++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 9999999999997643 4899999999999999999999875 56999999999999984 79999999999985321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.................
T Consensus 185 --------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~------- 248 (290)
T 3fpq_A 185 --------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP------- 248 (290)
T ss_dssp --------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC-------
T ss_pred --------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC-------
Confidence 12345689999999998864 69999999999999999999999997655544433332221111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+...++++.+++.+||+.||++|||++|++++
T Consensus 249 -~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 249 -ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11123345678999999999999999999999864
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.5e-50 Score=435.73 Aligned_cols=250 Identities=19% Similarity=0.299 Sum_probs=211.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46888999999999999999986 69999999997532 233567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|||+||+|.+++...+ .+++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997643 4999999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+... ......... ..
T Consensus 187 ~-----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~i~~----------~~ 250 (311)
T 4aw0_A 187 K-----QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAKIIK----------LE 250 (311)
T ss_dssp T-----CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH----------TC
T ss_pred C-----cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHc----------CC
Confidence 2 1223456899999999999999999999999999999999999999975433 222221111 11
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+|...+.++.+++.+|++.||++|||++|+..+
T Consensus 251 ~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 251 YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 23455667889999999999999999999987543
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.4e-49 Score=448.33 Aligned_cols=250 Identities=22% Similarity=0.368 Sum_probs=212.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
+.|+..+.||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56888899999999999999986 69999999997765555667899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
+||+|.++++.. .+++.++..++.|++.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--- 301 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 301 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC---
Confidence 999999999754 3899999999999999999999999 9999999999999999999999999998653221
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+...... +....... ... ...
T Consensus 302 ----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~~~------~~~-~~~ 369 (423)
T 4fie_A 302 ----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNL------PPR-LKN 369 (423)
T ss_dssp ----CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSC------CCC-CSC
T ss_pred ----ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCC------CCC-Ccc
Confidence 123456799999999999999999999999999999999999999976543322 22211110 001 112
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+..++.++.+++.+||+.||++|||++|++++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 34566789999999999999999999999874
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-49 Score=424.66 Aligned_cols=246 Identities=25% Similarity=0.368 Sum_probs=196.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|+..+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 47889999999999999999975 69999999997542 233567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+ +|+|.+++..+. .+++.++..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 999 689999997654 4999999999999999999999999 999999999999999999999999999864321
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.+.. ......... ..
T Consensus 166 -------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-~~~~~~~i~----------~~ 227 (275)
T 3hyh_A 166 -------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-IPVLFKNIS----------NG 227 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHH----------HT
T ss_pred -------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHH----------cC
Confidence 12234679999999999998886 479999999999999999999997543 222222211 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+|...++++.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 228 VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 223455667889999999999999999999999985
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4e-49 Score=431.92 Aligned_cols=264 Identities=21% Similarity=0.334 Sum_probs=199.2
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC----eEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG----EQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lV~E 701 (958)
+|...+.||+|+||+||+|++ +|+.||||++..... ....+.+|+..+.+++|||||+++|+|..++ ..+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 355668899999999999998 689999999965321 1222345666667889999999999998654 5799999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-----CCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE-----AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-----~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
||++|+|.++++.. .++++++.+++.|+|+||+|||++ +.++||||||||+|||+++++.+||+|||+|+..
T Consensus 82 y~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999999754 389999999999999999999987 2345999999999999999999999999999876
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccC------CCCCcchhhhHHHHHHHHHhCCCCCCCCch------------
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVLLELLTGMQPISHGKN------------ 838 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~S~Gv~l~elltG~~P~~~~~~------------ 838 (958)
....... ........||++|||||++.+. .++.++|||||||++|||+||+.||.....
T Consensus 159 ~~~~~~~---~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 159 DSATDTI---DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp ETTTTEE---SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred cCCCCce---eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 4322210 1122345799999999999764 467799999999999999999877643211
Q ss_pred -hHHHHHH-HhhcCcchhhhcccCCC--CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 839 -IVREVNV-ARDSGMVFSIIDNRMGS--YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 839 -~~~~~~~-~~~~~~~~~~i~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
....+.. ..... .++..+. ...+++..+.+|+.+||+.||++||||+||++.|+++.+.
T Consensus 236 ~~~~~~~~~~~~~~-----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 236 PSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCHHHHHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHhccc-----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0111111 11100 0111111 1235778899999999999999999999999999988753
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.5e-49 Score=428.07 Aligned_cols=247 Identities=24% Similarity=0.302 Sum_probs=200.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
++|+..+.||+|+||+||+|+.. .++.||||+++... .....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46888999999999999999863 47899999987542 2233468899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
|||||+||+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997644 4999999999999999999999999 99999999999999999999999999985422
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.... +...... .
T Consensus 179 ~~-------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~----------~ 240 (304)
T 3ubd_A 179 HE-------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTMIL----------K 240 (304)
T ss_dssp ---------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH----------H
T ss_pred CC-------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-HHHHHHH----------c
Confidence 11 1223467999999999999999999999999999999999999999754432 2222111 1
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSM-----SDVVR 894 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 894 (958)
....+|..++.++.+++.+||+.||++|||+ +|+++
T Consensus 241 ~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 241 AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1223456677889999999999999999984 56664
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.4e-47 Score=417.56 Aligned_cols=256 Identities=26% Similarity=0.425 Sum_probs=191.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC--------
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG-------- 694 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------- 694 (958)
++|+..+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35788899999999999999986 68999999987543 334567999999999999999999999986544
Q ss_pred ----eEEEEEEecCCCCHHHHhccCCC-CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEee
Q 002158 695 ----EQMLVYEFVPNGTLRDWLSGRTK-ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 695 ----~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
..|+|||||++|+|.+++..+.. ...++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence 36999999999999999986543 23456778899999999999999999 99999999999999999999999
Q ss_pred eeeecccccCCCCCCc-----cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002158 770 FGLSRLAPVLDDEGTM-----PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVN 844 (958)
Q Consensus 770 FGla~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~ 844 (958)
||+|+........... ........+||+.|||||++.+..|+.++|||||||++|||++ ||....+......
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 9999876443221111 0112344679999999999999999999999999999999996 7754322212111
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.... ...+.......+...+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~---------~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 239 DVRN---------LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHT---------TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHhc---------CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111 11111122344567889999999999999999999873
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-45 Score=411.86 Aligned_cols=262 Identities=22% Similarity=0.295 Sum_probs=204.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEe------CCe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE------EGE 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~ 695 (958)
++|...+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 46888899999999999999986 79999999997542 3345678999999999999999999999764 357
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.|||||||+ |+|.+++.... .+++.++..++.|++.||+|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 78999997543 5999999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
+...... ........+||+.|||||++.+. .++.++||||+||++|||++|+.||.+..............+....
T Consensus 208 ~~~~~~~---~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 208 LCTSPAE---HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp C----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred cccCccc---cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 5322111 12223456899999999998875 4689999999999999999999999765543332222111111100
Q ss_pred -------------hhcccCC--CC-----ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 -------------IIDNRMG--SY-----PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 -------------~i~~~~~--~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+..... .. .+..+.++.+|+.+||+.||++|||++|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000 00 11235678899999999999999999999875
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.1e-44 Score=401.81 Aligned_cols=264 Identities=19% Similarity=0.274 Sum_probs=201.9
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 696 (958)
...+.|++.+.||+|+||+||+|+.+ .++.||||++.... ...++.+|+++++.+ +||||+++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34578999999999999999999863 46789999986543 345688999999998 699999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeeeecc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGLSRL 775 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla~~ 775 (958)
|+|||||++|+|.+++. .+++.++..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.
T Consensus 96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 99999999999999994 2889999999999999999999999 9999999999999877 7999999999986
Q ss_pred cccCCCCC---------------------CccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCC
Q 002158 776 APVLDDEG---------------------TMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPI 833 (958)
Q Consensus 776 ~~~~~~~~---------------------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~ 833 (958)
........ ..........+||+.|||||++.+. .|+.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 53221100 0001122345799999999999876 4899999999999999999999999
Q ss_pred CCCchhHHHHHHHhh-cCc------------------------chhh---hc---ccC-------------CCCChHHHH
Q 002158 834 SHGKNIVREVNVARD-SGM------------------------VFSI---ID---NRM-------------GSYPSECVE 869 (958)
Q Consensus 834 ~~~~~~~~~~~~~~~-~~~------------------------~~~~---i~---~~~-------------~~~~~~~~~ 869 (958)
..+.+....+..... .+. .... +. ... .......++
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 766543322211100 000 0000 00 000 001123456
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 870 RFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 870 ~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
++.+|+.+|++.||++|||++|+++|
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 78899999999999999999999864
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.4e-43 Score=420.48 Aligned_cols=252 Identities=20% Similarity=0.304 Sum_probs=212.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
++|++.+.||+|+||+||+|+++ +|+.||||++......+.+.+.+|+++|+.++|||||++++++.+++..+||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57888999999999999999986 69999999998777667778999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC--CCeEEeeeeeecccccCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN--LNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~--~~~kl~DFGla~~~~~~~~ 781 (958)
+||+|.+++..+. ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 237 ~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~--- 309 (573)
T 3uto_A 237 SGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP--- 309 (573)
T ss_dssp CCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCT---
T ss_pred CCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccC---
Confidence 9999999996543 35999999999999999999999999 9999999999999854 8999999999987532
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+...... ........... ..
T Consensus 310 -----~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~i~~~~~~~------~~ 377 (573)
T 3uto_A 310 -----KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNM------DD 377 (573)
T ss_dssp -----TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCCC------CS
T ss_pred -----CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHhCCCCC------Cc
Confidence 1223456799999999999999999999999999999999999999976544322 22111111000 00
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....++.++.+|+.+||+.||.+||+++|+++|
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1123456788999999999999999999999875
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.1e-43 Score=417.25 Aligned_cols=247 Identities=23% Similarity=0.288 Sum_probs=202.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHH---HHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFL---TEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
++|+..+.||+|+||+||+|+.+ +|+.||||++..... .....+. .++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 46888999999999999999986 699999999864311 1222233 4467777889999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
||||||+||+|.++|.... .+++..+..++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+...
T Consensus 269 lVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999997654 4999999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcCcchh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKN--IVREVNVARDSGMVFS 854 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~--~~~~~~~~~~~~~~~~ 854 (958)
.. .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+... .......
T Consensus 344 ~~---------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~--------- 405 (689)
T 3v5w_A 344 KK---------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM--------- 405 (689)
T ss_dssp SC---------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH---------
T ss_pred CC---------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---------
Confidence 21 1234679999999999975 5799999999999999999999999964321 1111111
Q ss_pred hhcccCCCCChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 855 IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
+......+|..++.++.+|+.+||+.||.+|++ ++||.+|
T Consensus 406 -i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 406 -TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -HHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -hcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 111223446667788999999999999999998 6888764
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.5e-43 Score=391.38 Aligned_cols=280 Identities=43% Similarity=0.727 Sum_probs=232.0
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG 694 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 694 (958)
+++.++...+++|...+.||+|+||+||+|.+++++.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33444555778999999999999999999998889999999988766666778999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 695 EQMLVYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 695 ~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
..++||||+++|+|.+++.... ...+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999997544 235899999999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc-----hhHHHHHHHh
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK-----NIVREVNVAR 847 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~-----~~~~~~~~~~ 847 (958)
++....... ........||+.|+|||++.+..++.++||||||+++|||++|+.||.... ....+.....
T Consensus 186 ~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 260 (321)
T 2qkw_B 186 SKKGTELDQ-----THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260 (321)
T ss_dssp CEECSSSSC-----CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHH
T ss_pred ccccccccc-----cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcc
Confidence 986432221 112234568999999999999999999999999999999999999996432 1222222222
Q ss_pred hcCcchhhhcccC-CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 848 DSGMVFSIIDNRM-GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 848 ~~~~~~~~i~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
..+.....+++.. ...+..++..+.+++.+||+.||++||+++|++++|+.+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 2233333333333 345778999999999999999999999999999999998764
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.5e-43 Score=390.97 Aligned_cols=286 Identities=42% Similarity=0.716 Sum_probs=232.7
Q ss_pred cccCCccccChHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChh-cHHHHHHHHHHHHccCCCCcce
Q 002158 607 MKIDGVKGFKFKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ-GQNEFLTEIKLLSRLHHRNLVS 685 (958)
Q Consensus 607 ~~~~~~~~~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~ 685 (958)
......+.++++++....++|...+.||+|+||+||+|.+++++.||||++...... ....+.+|+++++.++||||++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 12 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp ---CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCC
T ss_pred cccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccc
Confidence 334456789999999999999999999999999999999888999999998764322 2336899999999999999999
Q ss_pred EEEEEEeCCeEEEEEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC
Q 002158 686 LLGYCDEEGEQMLVYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL 763 (958)
Q Consensus 686 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~ 763 (958)
+++++...+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+...++|+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp CCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred eEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence 9999999999999999999999999998654 33499999999999999999999999222299999999999999999
Q ss_pred CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCC-------C
Q 002158 764 NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISH-------G 836 (958)
Q Consensus 764 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~-------~ 836 (958)
.+||+|||+++...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||.. .
T Consensus 172 ~~kl~Dfg~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 245 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245 (326)
T ss_dssp CEEECCCSSCEECCSSS------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSC
T ss_pred CEEeccCccccccCccc------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccc
Confidence 99999999998653222 2223445699999999999999999999999999999999999999952 1
Q ss_pred chhHHHHHHHhhcCcchhhhcccC-CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 837 KNIVREVNVARDSGMVFSIIDNRM-GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
.....++.............+... ...+...+..+.+++.+||+.||.+|||++|++++|+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp SBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 112222222222222223333322 45577889999999999999999999999999999987
No 22
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.4e-42 Score=375.43 Aligned_cols=251 Identities=23% Similarity=0.369 Sum_probs=212.6
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..+|...+.||+|+||+||+|.+. +++.||||++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 357889999999999999999964 7899999998765555567799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++|+|.+++... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 9999999999764 3899999999999999999999999 99999999999999999999999999876532211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.................. ...
T Consensus 172 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--------~~~ 237 (297)
T 3fxz_A 172 ------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP--------ELQ 237 (297)
T ss_dssp ------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC--------CCS
T ss_pred ------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCC
Confidence 123456999999999999999999999999999999999999999765543332222111110 112
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+..++..+.+++.+||+.||++||+++|++++
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 245567889999999999999999999999874
No 23
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.2e-42 Score=379.14 Aligned_cols=263 Identities=28% Similarity=0.433 Sum_probs=215.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
.+|...+.||+|+||+||+|.+. .+..||||+++.. .....+.|.+|++++++++||||+++++++..++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45667789999999999999985 3556999999865 344456799999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.++++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 129 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred eeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999997543 34999999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
... ........+|+.|+|||++.+..++.++||||||+++|||++ |..||......... .... ..
T Consensus 205 ~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-~~~~---------~~ 270 (325)
T 3kul_A 205 PDA----AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI-SSVE---------EG 270 (325)
T ss_dssp --C----CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH-HHHH---------TT
T ss_pred ccc----eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH-HHHH---------cC
Confidence 211 122233456888999999999999999999999999999999 99999754432211 1111 11
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
.....+..++..+.+++.+||+.||++||+++++++.|+.+++....
T Consensus 271 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 12234556778899999999999999999999999999999876543
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.1e-41 Score=369.53 Aligned_cols=281 Identities=36% Similarity=0.626 Sum_probs=232.3
Q ss_pred CccccChHHHHHHHcCCCCC------ceeeeeCCeEEEEEEECCCcEEEEEEeccCC----hhcHHHHHHHHHHHHccCC
Q 002158 611 GVKGFKFKELAMATAYFSSS------TQVGQGGYGKVYKGILSDNTTVAIKRAEEGS----LQGQNEFLTEIKLLSRLHH 680 (958)
Q Consensus 611 ~~~~~~~~el~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H 680 (958)
....+++.++..++.+|... +.||+|+||+||+|.+ +++.||||++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999888 8999999999999987 68899999986532 2335679999999999999
Q ss_pred CCcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCC-CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 681 RNLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRT-KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 681 ~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
|||+++++++...+..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 999999999999999999999999999999997432 345899999999999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch-
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN- 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~- 838 (958)
+.++.+||+|||+++....... ........||+.|+|||++.+ .++.++||||||+++|||++|..||.....
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQ-----TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSS-----CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred cCCCcEEEeecccccccccccc-----cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 9999999999999986532211 122234569999999998865 588999999999999999999999975432
Q ss_pred --hHHHHHHH-hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 839 --IVREVNVA-RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 839 --~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
........ .........++..+...+...+..+.+++.+||+.||.+||++++++++|+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 11111111 1222334445555666788899999999999999999999999999999998753
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.2e-41 Score=375.18 Aligned_cols=263 Identities=31% Similarity=0.489 Sum_probs=210.0
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
...+|...+.||+|+||+||+|.+ +++.||||++.... ....++|.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 445778889999999999999987 68899999987653 334567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCC-CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 701 EFVPNGTLRDWLSGRTK-ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 99999999999976442 34899999999999999999999876 46999999999999999999999999999754221
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
........||+.|+|||++.+..++.++||||||+++|||++|+.||.............. ...
T Consensus 193 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~---------~~~ 256 (309)
T 3p86_A 193 -------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF---------KCK 256 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH---------SCC
T ss_pred -------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---------cCC
Confidence 1122345699999999999999999999999999999999999999976543222111110 111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
....+..++..+.+++.+||+.||++||+++++++.|+.+++..
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 23445667788999999999999999999999999999988643
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.6e-42 Score=388.40 Aligned_cols=263 Identities=26% Similarity=0.505 Sum_probs=216.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC--------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS--------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE 693 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 693 (958)
.++|...+.||+|+||+||+|.+. ++..||||+++... ....+++.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356778899999999999999862 35679999997653 33456799999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
+..++||||+++|+|.+++.... ...+++.+++.++.|+++||+|||+++ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 99999999999999999997643 234889999999999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
+.++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTT-----CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred CCCCCEEEccccCCcccCcccce-----ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999865332211 11223457889999999999999999999999999999999 9999975432
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
. ...... ........+..++..+.+++.+||+.||++||++.|+++.|++++....
T Consensus 312 ~-~~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 312 E-ELFKLL---------KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp G-GHHHHH---------HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred H-HHHHHH---------hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1 111111 1112234456677899999999999999999999999999999886543
No 27
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.9e-42 Score=376.84 Aligned_cols=268 Identities=26% Similarity=0.436 Sum_probs=216.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
++|...+.||+|+||+||+|.+. +++.||+|++........+.|.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 45777889999999999999986 68999999998777777788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++|+|.++++... ..+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 90 KGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp TTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999998643 34899999999999999999999999 9999999999999999999999999998654322111
Q ss_pred Cc-------cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 784 TM-------PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 784 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
.. .........||+.|+|||++.+..++.++||||||+++|||++|..|+.......... ........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-----~~~~~~~~ 240 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-----GLNVRGFL 240 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-----SBCHHHHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-----hhhhhccc
Confidence 00 0111124579999999999999999999999999999999999999986422110000 00000011
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
+ ...+..++..+.+++.+||+.||++||+++++++.|+++.+...
T Consensus 241 ~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 241 D---RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp H---HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred c---ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1 11244566789999999999999999999999999999876543
No 28
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.1e-41 Score=373.28 Aligned_cols=262 Identities=22% Similarity=0.319 Sum_probs=217.1
Q ss_pred cccChHHHHHHHcC----------CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCC
Q 002158 613 KGFKFKELAMATAY----------FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHR 681 (958)
Q Consensus 613 ~~~~~~el~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ 681 (958)
..++++++..+++. |...+.||+|+||.||+|++. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45778888777764 556678999999999999987 7999999999876666677899999999999999
Q ss_pred CcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC
Q 002158 682 NLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS 761 (958)
Q Consensus 682 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~ 761 (958)
||+++++++...+..++||||+++++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence 9999999999999999999999999999999643 4899999999999999999999999 999999999999999
Q ss_pred CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHH
Q 002158 762 NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVR 841 (958)
Q Consensus 762 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~ 841 (958)
++.+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~ 249 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP-------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 249 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC-------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred CCcEEEeeeeeeeecccCcc-------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999876532211 12345699999999999999999999999999999999999999976543322
Q ss_pred HHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 842 EVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 842 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ....... .+. ...+...+..+.+++.+||+.||++||+++|++++
T Consensus 250 ~-~~~~~~~------~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 M-KRLRDSP------PPK-LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp H-HHHHHSS------CCC-CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred H-HHHhcCC------CCC-cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1111110 000 11123456789999999999999999999999974
No 29
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.1e-41 Score=373.32 Aligned_cols=270 Identities=26% Similarity=0.434 Sum_probs=213.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-----CCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-----SDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~ 697 (958)
++|+..+.||+|+||+||+|++ .+++.||||++........+.|.+|++++++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4677788999999999999985 2688999999987777777889999999999999999999999865 35689
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999997653 34899999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC-------
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG------- 850 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~------- 850 (958)
..... ........|+..|+|||++.+..++.++||||||+++|||++|..|+...... .........
T Consensus 166 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 166 QDKEF----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVF 239 (295)
T ss_dssp --------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH--HHHHHCTTCCTHHHHH
T ss_pred CCcce----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH--HHhhhcCccccchhHH
Confidence 32211 11223345777899999999999999999999999999999999998643211 111110000
Q ss_pred cchh-hhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 851 MVFS-IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 851 ~~~~-~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
...+ .........+..++..+.+++.+||+.||++|||++|+++.|+++.+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 240 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 0011 11122234466778899999999999999999999999999999987653
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.2e-41 Score=375.85 Aligned_cols=247 Identities=25% Similarity=0.376 Sum_probs=208.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.+|...+.||+|+||.||+|.+. +|+.||||++... .....+++.+|+++++.++||||+++++++...+..++|||
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 94 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence 46788899999999999999984 7999999998654 34445678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.+++.... .+++.++..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 95 YASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999997653 3899999999999999999999999 9999999999999999999999999997653211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCC-CcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
......||+.|+|||++.+..++ .++||||+||++|||++|+.||.+.... ....... ...
T Consensus 169 -------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~----------~~~ 230 (328)
T 3fe3_A 169 -------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-ELRERVL----------RGK 230 (328)
T ss_dssp -------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH----------HCC
T ss_pred -------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHH----------hCC
Confidence 12345799999999999988875 6999999999999999999999754422 2211111 111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...|...+..+.+++.+||+.||.+|||++|++++
T Consensus 231 ~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 23344567788999999999999999999999874
No 31
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.3e-41 Score=382.94 Aligned_cols=261 Identities=28% Similarity=0.453 Sum_probs=204.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
.+|...+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57888999999999999999875 5778999999765 344456899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.++++... ..+++.+++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 125 ~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999997543 35899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
... ........+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ...... ..
T Consensus 201 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-~~~~i~---------~~ 266 (373)
T 2qol_A 201 PEA----AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-VIKAVD---------EG 266 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-HHHHHH---------TT
T ss_pred Ccc----ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH---------cC
Confidence 111 111222346788999999999999999999999999999998 999997544321 111111 11
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
.....+..++..+.+++.+||+.||++||+++++++.|+++.+..
T Consensus 267 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 112234567788999999999999999999999999999988643
No 32
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-41 Score=365.06 Aligned_cols=257 Identities=30% Similarity=0.483 Sum_probs=214.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
++|...+.||+|+||+||+|.+.+++.||||++.... ...+++.+|++++++++||||+++++++.+++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 4677788999999999999999889999999998643 334679999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 160 (269)
T 4hcu_A 89 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---- 160 (269)
T ss_dssp TCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH----
T ss_pred CCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccc----
Confidence 999999997543 35899999999999999999999999 9999999999999999999999999998643211
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
........||+.|+|||++.+..++.++||||+|+++|||++ |+.||....... ....... ......
T Consensus 161 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-~~~~~~~---------~~~~~~ 228 (269)
T 4hcu_A 161 --YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDIST---------GFRLYK 228 (269)
T ss_dssp --HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHT---------TCCCCC
T ss_pred --cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHhc---------CccCCC
Confidence 111223456778999999999999999999999999999999 999997544322 1111111 111223
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
+...+..+.+++.+||+.||++||+++|++++|+++.+.
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 445577899999999999999999999999999998753
No 33
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.5e-41 Score=366.92 Aligned_cols=262 Identities=25% Similarity=0.382 Sum_probs=210.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||.||+|.+. +++.||+|++... .....+.|.+|+.++++++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 46778899999999999999976 6899999998543 2334567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 91 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999997654 4899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||.................. ...
T Consensus 166 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~---- 233 (294)
T 4eqm_A 166 ------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP--NVT---- 233 (294)
T ss_dssp ---------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC--CHH----
T ss_pred ------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC--Ccc----
Confidence 11223456999999999999999999999999999999999999999865543332222211110 000
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhHhhC
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRP-SMSDVVRELENILKMF 903 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 903 (958)
...+..++..+.+++.+||+.||++|| +++++.+.|+.++...
T Consensus 234 ~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 234 TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 112334567899999999999999998 8999999888876443
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.2e-41 Score=363.19 Aligned_cols=257 Identities=27% Similarity=0.465 Sum_probs=214.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.++|...+.||+|+||+||+|.++++..||||++.... ...+++.+|++++++++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 35677889999999999999999888899999997643 33467999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 158 (268)
T 3sxs_A 86 SNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--- 158 (268)
T ss_dssp TTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC---
T ss_pred CCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh---
Confidence 9999999997543 34899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
........||+.|+|||++.+..++.++||||||+++|||++ |+.||.............. .....
T Consensus 159 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----------~~~~~ 225 (268)
T 3sxs_A 159 ---YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ----------GHRLY 225 (268)
T ss_dssp ---EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT----------TCCCC
T ss_pred ---hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHc----------CCCCC
Confidence 122233456778999999999999999999999999999999 9999975543322221111 11122
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
.+...++.+.+++.+||+.||++||+++|++++|+.+.+
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 226 RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 244456789999999999999999999999999988754
No 35
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2e-41 Score=382.12 Aligned_cols=272 Identities=27% Similarity=0.444 Sum_probs=221.6
Q ss_pred ccChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcce
Q 002158 614 GFKFKELAMATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVS 685 (958)
Q Consensus 614 ~~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~ 685 (958)
.+...+++...++|...+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 3555666777889999999999999999999842 46899999997653 34456799999999999 7999999
Q ss_pred EEEEEEeCC-eEEEEEEecCCCCHHHHhccCCC-----------------------------------------------
Q 002158 686 LLGYCDEEG-EQMLVYEFVPNGTLRDWLSGRTK----------------------------------------------- 717 (958)
Q Consensus 686 l~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~----------------------------------------------- 717 (958)
+++++...+ ..++||||+++|+|.++++....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999998755 48999999999999999976532
Q ss_pred -----------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 718 -----------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 718 -----------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12899999999999999999999999 9999999999999999999999999998653221
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
. ........||+.|+|||++.+..++.++||||||+++|||++ |+.||............... ..
T Consensus 248 ~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~---------~~ 313 (359)
T 3vhe_A 248 D-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE---------GT 313 (359)
T ss_dssp T-----CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH---------TC
T ss_pred c-----chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHc---------CC
Confidence 1 222344568999999999999999999999999999999999 99999754432222211111 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
....+..++.++.+++.+||+.||++||+++|++++|+++++.
T Consensus 314 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 2233455677899999999999999999999999999998864
No 36
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=377.54 Aligned_cols=250 Identities=23% Similarity=0.363 Sum_probs=201.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.++|...+.||+|+||+||+|.+. +|+.||||++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 467888899999999999999975 799999999876432 334568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 89 ~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~- 162 (347)
T 3zgw_A 89 YCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK- 162 (347)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-
Confidence 999999999997544 4899999999999999999999999 9999999999999999999999999987542211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........||+.|+|||++.+..+ +.++||||+||++|||++|..||.+..... ....... ..
T Consensus 163 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-~~~~i~~----------~~ 226 (347)
T 3zgw_A 163 -----DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-LYKKIMR----------GK 226 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH----------TC
T ss_pred -----CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHc----------CC
Confidence 112234579999999999988875 889999999999999999999997644322 2111111 11
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 227 ~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 227 YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 23345566788999999999999999999999986
No 37
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.6e-41 Score=385.27 Aligned_cols=261 Identities=28% Similarity=0.459 Sum_probs=214.2
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
..++|...+.||+|+||+||+|.+. +++.||||+++... ....++|.+|++++++++||||+++++++..++..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3457778899999999999999987 78999999987643 333457899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.++++... ..+++.++..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp ECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 9999999999997543 34899999999999999999999999 9999999999999999999999999997532110
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
. ........+++.|+|||++.+..++.++|||||||++|||++ |..||......... .... ...
T Consensus 268 ----~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~-~~~~---------~~~ 332 (377)
T 3cbl_A 268 ----Y-AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-EFVE---------KGG 332 (377)
T ss_dssp ----E-ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH-HHHH---------TTC
T ss_pred ----e-eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHH---------cCC
Confidence 0 000111235678999999999999999999999999999999 99999765432211 1111 111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
....+..++..+.+++.+||+.||++|||++++++.|+++.+.
T Consensus 333 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 2234556778899999999999999999999999999998754
No 38
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.4e-40 Score=366.51 Aligned_cols=265 Identities=26% Similarity=0.452 Sum_probs=211.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
..+|...+.||+|+||+||+|.+. ..+|+|+++.. .....+.|.+|++++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 357888899999999999999864 36899988753 34445679999999999999999999998754 56899999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999997543 45999999999999999999999999 99999999999999999999999999975432211
Q ss_pred CCCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
........||+.|+|||++. +..++.++||||||+++|||++|+.||................. ..+
T Consensus 188 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-----~~~ 257 (307)
T 3lb7_A 188 -----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY-----ASP 257 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTC-----CCC
T ss_pred -----cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCC-----CCc
Confidence 11223456999999999996 56688899999999999999999999976554333222221111 111
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
........+++.+.+++.+||+.+|++||++.|+++.|+.+...+|.
T Consensus 258 ~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 22233456678899999999999999999999999999999877764
No 39
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.4e-41 Score=373.32 Aligned_cols=266 Identities=23% Similarity=0.302 Sum_probs=206.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC----eEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG----EQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lV 699 (958)
.++|+..+.||+|+||+||+|++. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 357788899999999999999985 7899999997533 33345667999999999999999999998754 47999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc----------CCCCeeccCCCccceEecCCCCeEEee
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE----------AHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~----------~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
|||+++|+|.++++... +++.++..++.|+++||+|||+. + |+||||||+|||++.++.+||+|
T Consensus 101 ~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECC
T ss_pred EecCCCCCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999997643 89999999999999999999998 7 99999999999999999999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-----CCCCcchhhhHHHHHHHHHhCCCCCCCCchhH--HH
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVLLELLTGMQPISHGKNIV--RE 842 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~--~~ 842 (958)
||+++........ .......||+.|+|||++.+. .++.++|||||||++|||+||+.||....... ..
T Consensus 175 Fg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~ 249 (322)
T 3soc_A 175 FGLALKFEAGKSA-----GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249 (322)
T ss_dssp CTTCEEECTTSCC-----CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTT
T ss_pred CCcccccccccCc-----cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccch
Confidence 9999865432221 112235699999999999863 45668999999999999999999996432100 00
Q ss_pred HHHHhhcCcch---hh-hcccC-CC-----CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 843 VNVARDSGMVF---SI-IDNRM-GS-----YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 843 ~~~~~~~~~~~---~~-i~~~~-~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
........... .. ..... +. ....++..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 250 EEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00000000000 00 00000 11 1235677899999999999999999999999999998754
No 40
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.3e-41 Score=388.66 Aligned_cols=253 Identities=28% Similarity=0.428 Sum_probs=212.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC-eEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG-EQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lV~E~ 702 (958)
.++|...+.||+|+||+||+|.++ ++.||||+++... ..+.|.+|++++++++||||+++++++...+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 456777889999999999999985 7899999998653 4567999999999999999999999987665 79999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++|+|.++++......+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 99999999998765555899999999999999999999999 999999999999999999999999999853211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.....++..|+|||++.+..++.++|||||||++|||+| |+.||........ .... ......
T Consensus 343 -------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~-~~~i---------~~~~~~ 405 (450)
T 1k9a_A 343 -------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-VPRV---------EKGYKM 405 (450)
T ss_dssp -----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH-HHHH---------HTTCCC
T ss_pred -------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHH---------HcCCCC
Confidence 112357889999999999999999999999999999999 9999975432111 1111 111123
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
..|..++..+.+++.+||+.||++||++.++++.|+++...
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 34667788999999999999999999999999999998753
No 41
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=367.10 Aligned_cols=264 Identities=28% Similarity=0.475 Sum_probs=208.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
++|...+.||+|+||+||+|.+. ++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 35677789999999999999984 788999999753 345679999999999999999999998874 4799999999
Q ss_pred CCCHHHHhccCCC-CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC-eEEeeeeeecccccCCCC
Q 002158 705 NGTLRDWLSGRTK-ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN-AKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 705 ~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~-~kl~DFGla~~~~~~~~~ 782 (958)
+|+|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~---- 158 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---- 158 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc----
Confidence 9999999986543 24788999999999999999999932223999999999999998887 79999999875421
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
......||+.|+|||++.+..++.++||||||+++|||++|+.||............... ......
T Consensus 159 ------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~ 224 (307)
T 2eva_A 159 ------HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH--------NGTRPP 224 (307)
T ss_dssp ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH--------TTCCCC
T ss_pred ------ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh--------cCCCCC
Confidence 112345999999999999999999999999999999999999999753322111111111 111223
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCCCcccc
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPETDTMFS 911 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~ 911 (958)
.+..++..+.+++.+||+.||++||+++++++.|+.+.+.++..+.+..
T Consensus 225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~~~ 273 (307)
T 2eva_A 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQ 273 (307)
T ss_dssp CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSCCC
T ss_pred cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCccc
Confidence 3445677899999999999999999999999999999988887655443
No 42
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-41 Score=377.28 Aligned_cols=268 Identities=27% Similarity=0.439 Sum_probs=218.5
Q ss_pred HHHHHHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEE
Q 002158 619 ELAMATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCD 691 (958)
Q Consensus 619 el~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 691 (958)
++....++|...+.||+|+||.||+|.+. +++.||||+++... ....+.|.+|++++++++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33445678889999999999999999974 34889999998653 334567999999999999999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHHhccCC----------------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeec
Q 002158 692 EEGEQMLVYEFVPNGTLRDWLSGRT----------------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFH 749 (958)
Q Consensus 692 ~~~~~~lV~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH 749 (958)
..+..++||||+++|+|.+++.... ...+++.+++.++.|+++||+|||+++ |+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eec
Confidence 9999999999999999999997642 145899999999999999999999999 999
Q ss_pred cCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-
Q 002158 750 RDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT- 828 (958)
Q Consensus 750 ~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt- 828 (958)
|||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||||+++|||++
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 272 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADY-----YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 272 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-----BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCcc-----ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhc
Confidence 99999999999999999999999976532211 112233468899999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 829 GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 829 G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
|..||....... ..... ........+..++..+.+++.+||+.||++||++.+++++|+++.+...
T Consensus 273 g~~p~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 273 GLQPYYGMAHEE-VIYYV---------RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TCCTTTTSCHHH-HHHHH---------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCCcCCCCChHH-HHHHH---------hCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 999997544321 11111 1122233455677889999999999999999999999999999876543
No 43
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.7e-40 Score=370.00 Aligned_cols=268 Identities=17% Similarity=0.227 Sum_probs=214.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.+|...+.||+|+||+||+|... +++.||||++..... .+.+.+|+++++++ +||||+++++++..++..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 46778899999999999999974 789999999875432 23588999999999 999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC-----eEEeeeeeecccc
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN-----AKVADFGLSRLAP 777 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~-----~kl~DFGla~~~~ 777 (958)
+ +++|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++...
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 9 99999999864 335999999999999999999999999 999999999999998887 9999999998764
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc--hhHHHHHHHhhcCcchhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK--NIVREVNVARDSGMVFSI 855 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~--~~~~~~~~~~~~~~~~~~ 855 (958)
........+........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ................ .
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~-~ 240 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT-P 240 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS-C
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC-C
Confidence 433322222223345679999999999999999999999999999999999999997532 2222211111000000 0
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
. ......++ ++.+++.+||+.||.+||+++++++.|+++.+....
T Consensus 241 ~----~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 241 I----EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp H----HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H----HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 0 00011234 899999999999999999999999999999877654
No 44
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.2e-41 Score=392.32 Aligned_cols=263 Identities=25% Similarity=0.450 Sum_probs=217.7
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
++...++|...+.||+|+||+||+|.++++..||||+++... ...+.|.+|++++++++||||+++++++. .+..++|
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 344556788889999999999999999889999999998643 45678999999999999999999999987 5678999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.++++......+++.+++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 99999999999997654445889999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
. ........++..|+|||++....++.++|||||||++|||+| |+.||.+...... ...... .
T Consensus 338 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~-~~~i~~---------~ 401 (454)
T 1qcf_A 338 E------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-IRALER---------G 401 (454)
T ss_dssp H------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-HHHHHH---------T
T ss_pred c------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHc---------C
Confidence 1 111123346788999999999999999999999999999999 9999975443221 111111 1
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
.....+..++..+.+++.+||+.||++||++++|++.|+++....
T Consensus 402 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 402 YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 112335567889999999999999999999999999999876543
No 45
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.3e-41 Score=370.62 Aligned_cols=253 Identities=24% Similarity=0.355 Sum_probs=205.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|+..+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 46888899999999999999987 789999999875432 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 160 (323)
T 3tki_A 87 CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR- 160 (323)
T ss_dssp CTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE-
T ss_pred CCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCc-
Confidence 99999999997543 4899999999999999999999999 99999999999999999999999999986532221
Q ss_pred CCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
........||+.|+|||++.+..+ +.++|||||||++|||++|+.||................... .
T Consensus 161 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------~ 228 (323)
T 3tki_A 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------L 228 (323)
T ss_dssp ----ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--------S
T ss_pred ----ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--------C
Confidence 111234579999999999988776 679999999999999999999997654332222221111111 1
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....++..+.+++.+||+.||++||+++|++++
T Consensus 229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1123456778899999999999999999999864
No 46
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=378.37 Aligned_cols=266 Identities=26% Similarity=0.492 Sum_probs=219.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC--------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS--------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE 693 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 693 (958)
.++|...+.||+|+||+||+|.+. .+..||||++.... ....+++.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 457788899999999999999862 24679999997653 34457799999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence 99999999999999999997654 235899999999999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
+.++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTT-----CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred cCCCcEEEcccCccccccccccc-----ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999865332211 11223457889999999999999999999999999999999 9999975432
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCCC
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPETD 907 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 907 (958)
. ........ ......+..++.++.+++.+||+.||++||+++|++++|+++.......+
T Consensus 300 ~-~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 358 (382)
T 3tt0_A 300 E-ELFKLLKE---------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358 (382)
T ss_dssp H-HHHHHHHT---------TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred H-HHHHHHHc---------CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence 2 22111111 11223355667889999999999999999999999999999998776554
No 47
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9e-41 Score=363.62 Aligned_cols=258 Identities=26% Similarity=0.436 Sum_probs=212.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.++|...+.||+|+||+||+|.+.++..||||++.... ...+++.+|++++++++||||+++++++...+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 45677788999999999999999888899999998643 23467999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--- 174 (283)
T 3gen_A 102 ANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--- 174 (283)
T ss_dssp TTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH---
T ss_pred CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc---
Confidence 9999999997532 34999999999999999999999999 9999999999999999999999999998653211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
........||+.|+|||++.+..++.++||||+|+++|||++ |+.||........... ... .....
T Consensus 175 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~~---------~~~~~ 241 (283)
T 3gen_A 175 ---YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQ---------GLRLY 241 (283)
T ss_dssp ---HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHT---------TCCCC
T ss_pred ---cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH-Hhc---------ccCCC
Confidence 111223446788999999999999999999999999999999 9999976443222111 111 11122
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
.+...+..+.+++.+||+.||++||++++++++|+++.+.
T Consensus 242 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 242 RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 3444567899999999999999999999999999998754
No 48
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.5e-40 Score=370.27 Aligned_cols=248 Identities=23% Similarity=0.286 Sum_probs=208.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|+.+ +|+.||||+++... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 46788899999999999999986 68999999987532 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999997543 4899999999999999999999999 9999999999999999999999999997532111
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ ..
T Consensus 160 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~----------~~ 221 (337)
T 1o6l_A 160 -------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILM----------EE 221 (337)
T ss_dssp -------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH----------CC
T ss_pred -------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-HHHHHHHc----------CC
Confidence 1223467999999999999999999999999999999999999999754322 11111111 11
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
..+|...+.++.+++.+||+.||++|| +++|++++
T Consensus 222 ~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 234556678899999999999999999 89999875
No 49
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.5e-40 Score=371.85 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=206.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh------cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ------GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
.+.|...+.||+|+||+||+|..+ +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 356888899999999999999986 6899999998764322 356799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC----CeEEeeeee
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL----NAKVADFGL 772 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~----~~kl~DFGl 772 (958)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999654 35999999999999999999999999 99999999999998877 799999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
++...... ......||+.|+|||++.+..++.++||||+||++|||++|..||.+...... .......
T Consensus 166 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~i~~~--- 233 (361)
T 2yab_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANITAV--- 233 (361)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTT---
T ss_pred ceEcCCCC--------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhc---
Confidence 98653211 12345699999999999999999999999999999999999999976443221 1111111
Q ss_pred hhhhcccCCCCC----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIIDNRMGSYP----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...++ ...+..+.+++.+||..||++||+++|++++
T Consensus 234 -------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 234 -------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -------CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -------CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11112 2345678999999999999999999999864
No 50
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.6e-40 Score=359.26 Aligned_cols=253 Identities=34% Similarity=0.533 Sum_probs=201.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCCh----hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSL----QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||.||+|.+. ++.||||++..... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 46777889999999999999984 88999999875432 23467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC--------CCCeEEeeeee
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS--------NLNAKVADFGL 772 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~--------~~~~kl~DFGl 772 (958)
||+++++|.+++... .+++..+..++.|+++||+|||+++..+|+||||||+||+++. ++.+||+|||+
T Consensus 86 e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999999999643 4899999999999999999999998666899999999999986 77899999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
++..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...............
T Consensus 163 ~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---- 229 (271)
T 3dtc_A 163 AREWHRT---------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN---- 229 (271)
T ss_dssp ----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS----
T ss_pred ccccccc---------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC----
Confidence 9754321 112346999999999999999999999999999999999999999765443222211111
Q ss_pred hhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 853 FSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
......+..++..+.+++.+||+.||++||++.|++++|+++
T Consensus 230 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 -----KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -----CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111234556778899999999999999999999999999753
No 51
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-40 Score=358.94 Aligned_cols=254 Identities=21% Similarity=0.357 Sum_probs=211.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lV~ 700 (958)
++|...+.||+|+||+||+|+++ ++.||||++... .....+.|.+|++++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46777889999999999999984 889999998764 334456799999999999999999999999887 7889999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.......+++.++..++.|+++||+|||+.+ ++|+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-- 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence 9999999999998766556999999999999999999999875 5699999999999999999999999998753211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCC---cchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTD---KSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
....||+.|+|||++.+..++. ++||||||+++|||++|+.||.............. .
T Consensus 166 ----------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~---------~ 226 (271)
T 3kmu_A 166 ----------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL---------E 226 (271)
T ss_dssp ----------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH---------S
T ss_pred ----------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh---------c
Confidence 1235899999999998766555 79999999999999999999976544322221111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
......+..++..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11233455677889999999999999999999999999998753
No 52
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4e-40 Score=361.26 Aligned_cols=270 Identities=18% Similarity=0.248 Sum_probs=216.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|.+. +++.||||++.... ..+.+.+|+++++.+ +|+|++++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 46788899999999999999974 78999999987543 223578999999999 799999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC-----eEEeeeeeecccc
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN-----AKVADFGLSRLAP 777 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~-----~kl~DFGla~~~~ 777 (958)
+ +++|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+||+++.++. +||+|||+++...
T Consensus 88 ~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 88 L-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred c-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 9 999999997643 34899999999999999999999999 999999999999987776 9999999998765
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcCcchhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN--IVREVNVARDSGMVFSI 855 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~--~~~~~~~~~~~~~~~~~ 855 (958)
........+........||+.|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---- 238 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ---- 238 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH----
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc----
Confidence 4333222222234456799999999999999999999999999999999999999976331 1111111110000
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
..........++..+.+++.+||+.||++||+++++++.|+++.+.....
T Consensus 239 -~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 239 -STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp -HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred -CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 00000112245678999999999999999999999999999999876543
No 53
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.8e-40 Score=366.88 Aligned_cols=261 Identities=29% Similarity=0.493 Sum_probs=215.9
Q ss_pred HcCCCCCceeeeeCCeEEEEEEE------CCCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGIL------SDNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
.++|...+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45677889999999999999986 24588999999764 344457799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCC----------------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTK----------------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKA 754 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp 754 (958)
++||||+++++|.+++..... ..+++.++..++.|+++||+|||+++ |+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence 999999999999999976432 34899999999999999999999999 99999999
Q ss_pred cceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCC
Q 002158 755 SNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPI 833 (958)
Q Consensus 755 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~ 833 (958)
+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDS-----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSC-----EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred heEEEcCCCCEEEcccccccccccccc-----ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999986532211 111223457889999999999999999999999999999999 99999
Q ss_pred CCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 834 SHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
........ ..... .......+..++..+.+++.+||+.||++||+++|++++|++++..
T Consensus 254 ~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 254 PGIPPERL-FNLLK---------TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp TTCCGGGH-HHHHH---------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHH-HHHhh---------cCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 75433211 11111 1112234556778899999999999999999999999999998764
No 54
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.2e-40 Score=366.07 Aligned_cols=264 Identities=27% Similarity=0.422 Sum_probs=217.4
Q ss_pred HcCCCCCceeeeeCCeEEEEEEE------CCCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGIL------SDNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGE 695 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 695 (958)
.++|...+.||+|+||+||+|.+ .+++.||||++.... ....+.+.+|+++++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45677889999999999999985 246899999997653 34457799999999999 99999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCC----------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTK----------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
.++||||+++|+|.+++..... ..+++.++..++.|+++||+|||+++ |+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence 9999999999999999976542 24899999999999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
+.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 253 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTT-----SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred cCCCCEEEcccccccccccccc-----ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence 9999999999999986533221 122233457889999999999999999999999999999999 9999975443
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
.......... . .....+..++..+.+++.+||+.||.+||+++|++++|++++....
T Consensus 254 ~~~~~~~~~~-~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 254 DSKFYKMIKE-G--------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp SHHHHHHHHH-T--------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHhcc-C--------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 2222111111 0 1112244567889999999999999999999999999999887654
No 55
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1e-40 Score=387.73 Aligned_cols=261 Identities=31% Similarity=0.481 Sum_probs=212.5
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
...++|...+.||+|+||+||+|.++++..||||+++... ...++|.+|++++++++||||+++++++.. +..++|||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 3456778889999999999999999888889999998643 345689999999999999999999999876 67899999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.++++......+++.++..++.|+++||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 334 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCc-
Confidence 999999999997544455899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........++..|+|||++....++.++||||||+++|||++ |+.||.+..... ...... ....
T Consensus 335 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~~~~i~---------~~~~ 399 (452)
T 1fmk_A 335 -----YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVE---------RGYR 399 (452)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHH---------TTCC
T ss_pred -----eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH---------cCCC
Confidence 111223457889999999999999999999999999999999 999997544322 111111 1112
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
...+..++..+.+++.+||+.||++|||++++++.|+++....
T Consensus 400 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 2345667889999999999999999999999999999876543
No 56
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2e-40 Score=374.62 Aligned_cols=277 Identities=17% Similarity=0.190 Sum_probs=213.8
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECC------CcEEEEEEeccCChhcH-----------HHHHHHHHHHHccCCCCcce
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSD------NTTVAIKRAEEGSLQGQ-----------NEFLTEIKLLSRLHHRNLVS 685 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~ 685 (958)
..++|...+.||+|+||+||+|.+.. ++.||||++........ ..+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578888999999999999999864 47899999876542211 12445666778889999999
Q ss_pred EEEEEEeC----CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-
Q 002158 686 LLGYCDEE----GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD- 760 (958)
Q Consensus 686 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~- 760 (958)
+++++... ...++||||+ +++|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 99998764 4589999999 999999997643 45999999999999999999999999 99999999999999
Q ss_pred -CCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh
Q 002158 761 -SNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI 839 (958)
Q Consensus 761 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~ 839 (958)
.++.+||+|||+++.+..................||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999876543322222222234456999999999999999999999999999999999999999753222
Q ss_pred HHHHHHH--hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 840 VREVNVA--RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 840 ~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
....... .........++..+. +..++.++.+++..||+.||++||+++++++.|+++++.....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 2211111 111112222222221 1234678999999999999999999999999999999876543
No 57
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=365.88 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=206.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh------cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ------GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
.++|...+.||+|+||.||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++...+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 346888899999999999999986 6899999998764321 356799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC----CeEEeeeee
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL----NAKVADFGL 772 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~----~~kl~DFGl 772 (958)
++||||+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999654 34999999999999999999999999 99999999999999887 899999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||...................
T Consensus 165 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 236 (326)
T 2y0a_A 165 AHKIDFGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236 (326)
T ss_dssp CEECCTTS--------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC
T ss_pred CeECCCCC--------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc
Confidence 98653221 1223569999999999999999999999999999999999999997544322211111110000
Q ss_pred hhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ......+..+.+++.+||+.||++|||++|++++
T Consensus 237 ~~-------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 237 ED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CH-------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred Cc-------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 0012345678999999999999999999999974
No 58
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=365.95 Aligned_cols=251 Identities=19% Similarity=0.305 Sum_probs=207.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
++|...+.||+|+||+||+|.+. +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 56788899999999999999986 68899999987543 34567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC--CCCeEEeeeeeecccccCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS--NLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~--~~~~kl~DFGla~~~~~~~~ 781 (958)
++|+|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 84 ~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~--- 156 (321)
T 1tki_A 84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP--- 156 (321)
T ss_dssp CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCT---
T ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC---
Confidence 9999999997543 35899999999999999999999999 999999999999987 78999999999986532
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
........||+.|+|||++.+..++.++||||+||++|||++|..||....... ............. ..
T Consensus 157 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~--~~--- 225 (321)
T 1tki_A 157 -----GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEYTFD--EE--- 225 (321)
T ss_dssp -----TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCCC--HH---
T ss_pred -----CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHcCCCCCC--hh---
Confidence 122344679999999999998889999999999999999999999997644322 2211111110000 00
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....++.++.+++.+||+.||++|||+.|++++
T Consensus 226 -~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 226 -AFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011345788999999999999999999999986
No 59
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-41 Score=377.64 Aligned_cols=260 Identities=27% Similarity=0.426 Sum_probs=213.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
++|...+.||+|+||+||+|.+. +++.||||++... ......++.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 46778889999999999999953 4678999999754 3445567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC-----CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC---CeEEee
Q 002158 698 LVYEFVPNGTLRDWLSGRT-----KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL---NAKVAD 769 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~---~~kl~D 769 (958)
+||||+++|+|.+++.... ...+++.+++.++.|+++||+|||+++ |+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999997543 235899999999999999999999999 99999999999999555 599999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhh
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~ 848 (958)
||+++........ .......||+.|+|||++.+..++.++|||||||++|||++ |..||....... ......
T Consensus 228 FG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~-~~~~i~- 300 (367)
T 3l9p_A 228 FGMARDIYRAGYY-----RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-VLEFVT- 300 (367)
T ss_dssp CHHHHHHHHHSSC-----TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHHHH-
T ss_pred Ccccccccccccc-----ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH-
Confidence 9999855322211 11223568999999999999999999999999999999998 999997544322 111111
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
.......+..++..+.+++.+||+.||++||++++++++|+.+.+.
T Consensus 301 --------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 301 --------SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp --------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------cCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 1112233556678899999999999999999999999999987753
No 60
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.2e-41 Score=363.62 Aligned_cols=258 Identities=27% Similarity=0.418 Sum_probs=202.6
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.++|...+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4577788999999999999999753 4579999987643 344567999999999999999999999985 467899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++++|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999997543 34899999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.. ........+|+.|+|||++.+..++.++||||||+++|||++ |..||.......... .. ..
T Consensus 169 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~-~i---------~~ 232 (281)
T 1mp8_A 169 ST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RI---------EN 232 (281)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-HH---------HT
T ss_pred cc------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHH-HH---------Hc
Confidence 11 111223457789999999999999999999999999999997 999997544322111 11 11
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
......+..++..+.+++.+||+.||++||++.|+++.|+++++.
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 233 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 112234556778899999999999999999999999999998753
No 61
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2e-40 Score=368.81 Aligned_cols=258 Identities=26% Similarity=0.439 Sum_probs=204.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCc----EEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNT----TVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
++|...+.||+|+||+||+|++. +++ .||+|.+... .....++|.+|++++++++||||++++++|..+ ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence 45777889999999999999975 344 3688887643 334567899999999999999999999999876 4789
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999998654 34899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||......... .... .
T Consensus 170 ~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~---------~ 234 (327)
T 3poz_A 170 EEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILE---------K 234 (327)
T ss_dssp TCC------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HHHH---------T
T ss_pred Ccc-----cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH-HHHH---------c
Confidence 221 112233457889999999999999999999999999999999 99999754332111 1111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
......+..++..+.+++.+||+.||++||++.|++++|+.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 235 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111233556678899999999999999999999999999998753
No 62
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-40 Score=364.52 Aligned_cols=245 Identities=23% Similarity=0.356 Sum_probs=207.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|+.+ +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 46778899999999999999986 68999999987532 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 9999999999997644 4899999999999999999999999 99999999999999999999999999986421
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..... ..
T Consensus 159 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~i~~----------~~ 219 (318)
T 1fot_A 159 --------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY-EKILN----------AE 219 (318)
T ss_dssp --------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHH----------CC
T ss_pred --------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-HHHHh----------CC
Confidence 123457999999999999999999999999999999999999999765432221 11111 11
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
..+|...+.++.+++.+|++.||++|| +++|++++
T Consensus 220 ~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 233555678899999999999999999 88888864
No 63
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=371.57 Aligned_cols=268 Identities=26% Similarity=0.401 Sum_probs=213.6
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEE------CCCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeC
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGIL------SDNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEE 693 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 693 (958)
...++|...+.||+|+||+||+|.+ .++..||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3456788889999999999999996 246689999997542 23346799999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccCCC---------------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCC
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTK---------------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDI 752 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Di 752 (958)
+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+++ |+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCC
Confidence 999999999999999999976532 23789999999999999999999999 999999
Q ss_pred CccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCC
Q 002158 753 KASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQ 831 (958)
Q Consensus 753 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~ 831 (958)
||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||||+++|||+| |..
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 273 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSN-----YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCcc-----ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999986533221 122334557889999999999999999999999999999998 999
Q ss_pred CCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 832 PISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 832 P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
||............... + .....+..++..+.+++.+||+.||.+||++.+++++|+.+++..++.
T Consensus 274 p~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 274 PYPGIPVDANFYKLIQN-G--------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp SSTTCCCSHHHHHHHHT-T--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred CcccCCcHHHHHHHHhc-C--------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 99764432221111111 1 112334556788999999999999999999999999999988765543
No 64
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-40 Score=391.61 Aligned_cols=259 Identities=30% Similarity=0.478 Sum_probs=217.0
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECC-CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
...+|...+.||+|+||.||+|.++. +..||||+++... ...++|.+|++++++++||||++++++|...+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 44567788899999999999999874 8899999997643 346789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.++++......+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 999999999998766666999999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........+++.|+|||++....++.++|||||||++|||++ |+.||....... ...... ....
T Consensus 373 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~-~~~~~~---------~~~~ 437 (495)
T 1opk_A 373 -----YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLE---------KDYR 437 (495)
T ss_dssp -----EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHHHHH---------TTCC
T ss_pred -----eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH---------cCCC
Confidence 111223446788999999999999999999999999999999 999997543221 111111 1111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
...+..++..+.+++.+||+.||++||+++++++.|+.+..
T Consensus 438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 23456678899999999999999999999999999988753
No 65
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.7e-40 Score=360.63 Aligned_cols=262 Identities=28% Similarity=0.461 Sum_probs=215.1
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
..++|...+.||+|+||.||+|.+++++.||||++.... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 345677889999999999999999888899999997643 345679999999999999999999999874 568999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.......+++.++..++.|+++||+|||+++ |+||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 163 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-- 163 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC--
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcc--
Confidence 99999999997544335899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
........++..|+|||++.+..++.++||||||+++|||++ |+.||....... ....... ....
T Consensus 164 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~---------~~~~ 229 (279)
T 1qpc_A 164 ----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-VIQNLER---------GYRM 229 (279)
T ss_dssp ----EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHT---------TCCC
T ss_pred ----cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-HHHHHhc---------ccCC
Confidence 111223457889999999998899999999999999999999 999997544322 1111111 1112
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
..+..++..+.+++.+||+.||++||+++++++.|+++......
T Consensus 230 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 23455678899999999999999999999999999998876543
No 66
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=372.22 Aligned_cols=250 Identities=23% Similarity=0.328 Sum_probs=204.4
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 697 (958)
..++|...+.||+|+||+||+|+++ +++.||||+++.. .....+.+.+|.++++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3467888999999999999999986 6899999998753 223345688999999998 7999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++|+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999999997643 4899999999999999999999999 9999999999999999999999999997532
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......
T Consensus 176 ~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~---------- 237 (353)
T 3txo_A 176 CN-------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-DLFEAIL---------- 237 (353)
T ss_dssp C----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH----------
T ss_pred cC-------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-HHHHHHH----------
Confidence 11 12234567999999999999999999999999999999999999999754432 2221111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCH------HHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSM------SDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 895 (958)
.....+|...+..+.+++.+|++.||.+||++ +|++++
T Consensus 238 ~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 238 NDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred cCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 11223455567789999999999999999998 777764
No 67
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-40 Score=363.45 Aligned_cols=261 Identities=30% Similarity=0.476 Sum_probs=219.5
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
...++|...+.||+|+||+||+|.+. ++..||||++.... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34567888899999999999999987 48899999997643 34567999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 9999999999998766667999999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
........||+.|+|||++.+..++.++||||||+++|||++ |..||........ ..... ...
T Consensus 166 ------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~-~~~~~---------~~~ 229 (288)
T 3kfa_A 166 ------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLE---------KDY 229 (288)
T ss_dssp ------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-HHHHH---------TTC
T ss_pred ------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHh---------ccC
Confidence 222334557889999999999999999999999999999999 9999975432211 11111 111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
....+..++..+.+++.+|++.||.+||+++++++.|+.+...
T Consensus 230 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 1233556678899999999999999999999999999998764
No 68
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-40 Score=371.81 Aligned_cols=266 Identities=24% Similarity=0.408 Sum_probs=215.9
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEECC-C-----cEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEE
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILSD-N-----TTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCD 691 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 691 (958)
.+...++|...+.||+|+||+||+|.+.. + ..||||.+.... ....+.+.+|+++++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 44456778889999999999999999752 2 479999997653 34456799999999999 8999999999999
Q ss_pred eCCeEEEEEEecCCCCHHHHhccCC------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 692 EEGEQMLVYEFVPNGTLRDWLSGRT------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 692 ~~~~~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
..+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+|||+
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEE
Confidence 9999999999999999999997532 234789999999999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
+.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 272 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSN-----YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTT-----SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred CCCCeEEECccccccccccccc-----eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch
Confidence 9999999999999986533221 112233457889999999999999999999999999999999 9999975432
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
.......... ......+..++..+.+++.+||+.||.+||++.|+++.|+++...
T Consensus 273 ~~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 273 NSKFYKLVKD---------GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp SHHHHHHHHH---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhc---------CCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 2221111111 011123445567899999999999999999999999999987753
No 69
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-40 Score=371.65 Aligned_cols=252 Identities=19% Similarity=0.318 Sum_probs=210.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
++|...+.||+|+||+||+|... +++.||+|++..........+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 57888899999999999999986 68999999998776666678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC--CCCeEEeeeeeecccccCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS--NLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~--~~~~kl~DFGla~~~~~~~~ 781 (958)
++|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 131 ~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~-- 204 (387)
T 1kob_A 131 SGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-- 204 (387)
T ss_dssp CCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--
T ss_pred CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC--
Confidence 9999999997543 35999999999999999999999999 999999999999974 477999999999865321
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|..||......... ......... ...
T Consensus 205 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-~~i~~~~~~------~~~ 271 (387)
T 1kob_A 205 ------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL-QNVKRCDWE------FDE 271 (387)
T ss_dssp ------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHHCCCC------CCS
T ss_pred ------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH-HHHHhCCCC------CCc
Confidence 1123456999999999999999999999999999999999999999765433222 111111100 001
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....++.++.+++.+||+.||++||+++|++++
T Consensus 272 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1223456789999999999999999999999974
No 70
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.1e-40 Score=369.68 Aligned_cols=253 Identities=22% Similarity=0.317 Sum_probs=207.4
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
..++|...+.||+|+||.||+|.++ +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567888999999999999999986 68999999997543 34456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC---CCeEEeeeeeeccc
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN---LNAKVADFGLSRLA 776 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~---~~~kl~DFGla~~~ 776 (958)
|||+++|+|.+++.... .+++.++..++.|+++||+|||+++ |+||||||+|||++.+ +.+||+|||+++..
T Consensus 107 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999997543 4899999999999999999999999 9999999999999865 45999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
.... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+...... ...........
T Consensus 182 ~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-~~~i~~~~~~~--- 249 (362)
T 2bdw_A 182 NDSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-YAQIKAGAYDY--- 249 (362)
T ss_dssp TTCC--------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCC---
T ss_pred cCCc--------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCC---
Confidence 3211 12345699999999999999999999999999999999999999976543221 11111110000
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......++..+.+++.+||+.||++||++.|++++
T Consensus 250 ---~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 ---PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ---CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000112456789999999999999999999999875
No 71
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-40 Score=382.09 Aligned_cols=265 Identities=22% Similarity=0.279 Sum_probs=212.7
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEE
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYC 690 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~ 690 (958)
.+++++....++|+..+.||+|+||+||+|+++ +++.||||++..... .....+.+|..+++.++||||+++++++
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345666677789999999999999999999987 578999999865321 1123488999999999999999999999
Q ss_pred EeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeee
Q 002158 691 DEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADF 770 (958)
Q Consensus 691 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DF 770 (958)
.+++..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcch
Confidence 99999999999999999999997532 34999999999999999999999999 999999999999999999999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNV 845 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~ 845 (958)
|+|+...... ........||+.|+|||++. ...++.++|||||||++|||++|+.||............
T Consensus 220 Gla~~~~~~~------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i 293 (437)
T 4aw2_A 220 GSCLKLMEDG------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293 (437)
T ss_dssp TTCEECCTTS------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred hhhhhcccCC------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh
Confidence 9997653211 12233467999999999997 457899999999999999999999999765432222111
Q ss_pred HhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002158 846 ARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEH--RPSMSDVVRE 895 (958)
Q Consensus 846 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 895 (958)
..... ....+......+..+.+++.+|+..+|++ ||+++|++++
T Consensus 294 ~~~~~------~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 294 MNHKE------RFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HTHHH------HCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hhccc------cccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 11000 00111222335678899999999888888 9999999875
No 72
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.5e-40 Score=366.27 Aligned_cols=265 Identities=28% Similarity=0.433 Sum_probs=201.8
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEECC-C---cEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILSD-N---TTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE 695 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 695 (958)
...++|...+.||+|+||+||+|.+.. + ..||||++... .....+++.+|++++++++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345678889999999999999999754 3 27999998764 33445789999999999999999999999987765
Q ss_pred E------EEEEEecCCCCHHHHhccCC----CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 696 Q------MLVYEFVPNGTLRDWLSGRT----KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 696 ~------~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
. ++||||+++|+|.+++.... ...+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCE
Confidence 5 99999999999999996432 225899999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~ 844 (958)
||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...........
T Consensus 177 kl~Dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~ 251 (323)
T 3qup_A 177 CVADFGLSRKIYSGDY-----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY 251 (323)
T ss_dssp EECCCCC----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred EEeecccccccccccc-----ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 9999999986532211 112233457889999999999999999999999999999999 9999976443222111
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
+........+..++..+.+++.+||+.||++||++.++++.|++++....
T Consensus 252 ----------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 252 ----------LIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp ----------HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred ----------HhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 11112233455667889999999999999999999999999999987543
No 73
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.6e-40 Score=364.15 Aligned_cols=262 Identities=25% Similarity=0.348 Sum_probs=200.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe----E
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE----Q 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~ 696 (958)
++|...+.||+|+||+||+|.+. +++.||||++..... .....+.+|++++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 46788899999999999999974 789999999976532 334578999999999999999999999876543 4
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++++|.++++... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 99999999999999997543 4899999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus 167 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 241 (311)
T 3ork_A 167 ADSGNS----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA- 241 (311)
T ss_dssp -------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHH-
T ss_pred cccccc----cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccc-
Confidence 332211 122234569999999999999999999999999999999999999997655433222222211111100
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH-HHHHhHhh
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR-ELENILKM 902 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~-~L~~~~~~ 902 (958)
....++..+.+++.+||+.||++||++.+++. .+.+....
T Consensus 242 ------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 242 ------RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp ------HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred ------ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 01235678999999999999999997776654 45555433
No 74
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.7e-40 Score=375.19 Aligned_cols=266 Identities=19% Similarity=0.261 Sum_probs=207.9
Q ss_pred cCCCCCceeeee--CCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQG--GYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
.+|+..+.||+| +||+||+|++. +++.||||++... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 467788999999 99999999987 6999999998754 233456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.+++.......+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.+......
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 99999999999998765566999999999999999999999999 999999999999999999999999998654322
Q ss_pred CCCCCccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh-
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII- 856 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i- 856 (958)
...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.............. .....
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~ 259 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT--VPCLLD 259 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC--CCcccc
Confidence 2111111112223468999999999987 678999999999999999999999997644322221111000 00000
Q ss_pred ------------------------------------cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 ------------------------------------DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ------------------------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......+..++..+.+++.+||+.||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000011233456779999999999999999999999975
No 75
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.7e-40 Score=354.58 Aligned_cols=256 Identities=30% Similarity=0.483 Sum_probs=213.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
++|...+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 46777889999999999999998889999999986533 34679999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCC
Q 002158 705 NGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 784 (958)
+++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~---- 158 (267)
T 3t9t_A 87 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---- 158 (267)
T ss_dssp TCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH----
T ss_pred CCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccc----
Confidence 999999997643 34899999999999999999999999 9999999999999999999999999997642211
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCC
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSY 863 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 863 (958)
........|+..|+|||++.+..++.++||||||+++|||++ |+.||....... ....... ......
T Consensus 159 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~i~~---------~~~~~~ 226 (267)
T 3t9t_A 159 --YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDIST---------GFRLYK 226 (267)
T ss_dssp --HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHT---------TCCCCC
T ss_pred --ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-HHHHHhc---------CCcCCC
Confidence 111123457788999999999999999999999999999999 899997544322 1111111 111223
Q ss_pred ChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 864 PSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 864 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
+...+..+.+++.+||+.||++||++++++++|+++.+
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 44556789999999999999999999999999999875
No 76
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.6e-40 Score=369.82 Aligned_cols=274 Identities=27% Similarity=0.393 Sum_probs=214.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-----CCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEE--eCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-----SDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCD--EEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~ 697 (958)
++|...+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4677788999999999999985 368899999998877777778999999999999999999999986 456789
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999997533 24899999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc----Ccch
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS----GMVF 853 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~----~~~~ 853 (958)
.... .........||..|+|||++.+..++.++||||||+++|||++|+.||................ ....
T Consensus 179 ~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 179 LDKD----YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp TTCS----EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred cCCc----cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 3221 1112233458888999999999999999999999999999999999986432211100000000 0011
Q ss_pred hhh-cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 854 SII-DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 854 ~~i-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
..+ .......+..++..+.+++.+||+.||++||+++|++++|+.+.......
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 111 12223446677889999999999999999999999999999987655433
No 77
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3e-40 Score=374.64 Aligned_cols=257 Identities=21% Similarity=0.311 Sum_probs=205.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 699 (958)
++|...+.||+|+||+||+|+++ +++.||||+++... ....+.+.+|..+++++ +||||+++++++.+++..++|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 46888899999999999999987 58899999987542 22234578999999887 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 132 ~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999997643 4999999999999999999999999 999999999999999999999999999753211
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ........+.+...
T Consensus 207 -------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~--~~~~~~~~~~i~~~ 277 (396)
T 4dc2_A 207 -------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD--QNTEDYLFQVILEK 277 (396)
T ss_dssp -------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------CCHHHHHHHHHHC
T ss_pred -------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccc--hhhHHHHHHHHhcc
Confidence 122345679999999999999999999999999999999999999996322110000 00000111222222
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCH------HHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSM------SDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 895 (958)
...+|...+..+.+++.+||+.||++||++ +|++++
T Consensus 278 ~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 278 QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 334566677889999999999999999985 566653
No 78
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.8e-40 Score=361.34 Aligned_cols=259 Identities=25% Similarity=0.313 Sum_probs=201.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|.+.+++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 56788899999999999999998899999999875422 2246788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ ++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 101 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 173 (311)
T 3niz_A 101 ME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-- 173 (311)
T ss_dssp CS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--
T ss_pred CC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc--
Confidence 97 58888887543 34899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh--hcCcc---hh--
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR--DSGMV---FS-- 854 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~--~~~~~---~~-- 854 (958)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.............. ..... ..
T Consensus 174 -----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 174 -----RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp -----C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred -----ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence 11233468999999999976 5689999999999999999999999975443222111111 00000 00
Q ss_pred ----hhcccC---CC-----CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 ----IIDNRM---GS-----YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ----~i~~~~---~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... .. ....++.++.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000 00 112345678999999999999999999999974
No 79
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.2e-40 Score=358.23 Aligned_cols=261 Identities=26% Similarity=0.494 Sum_probs=201.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
..+|...+.||+|+||+||+|.+. ..||||+++.. .....+.|.+|++++++++||||+++++++. .+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence 457888899999999999999864 35999998754 3344567999999999999999999999764 557899999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999996543 45899999999999999999999999 99999999999999999999999999975532221
Q ss_pred CCCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
........||+.|+|||++. +..++.++||||||+++|||++|+.||.................. ..
T Consensus 176 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-----~~ 245 (289)
T 3og7_A 176 -----SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL-----SP 245 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSC-----CC
T ss_pred -----cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccccc-----Cc
Confidence 11223456999999999997 566888999999999999999999999765544333322222111 11
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
........++..+.+++.+||+.||++||+++++++.|+++.+
T Consensus 246 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1223345667889999999999999999999999999998764
No 80
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-39 Score=401.81 Aligned_cols=337 Identities=23% Similarity=0.321 Sum_probs=249.0
Q ss_pred CCCHhHHHHHHHHHHHcccCccccCCCCCC------CCCCCCC------------CceeeCccccCCCceeeEEEEccCC
Q 002158 35 TTDPQEASALRAIKNSLVDSMNHLRNWNKG------DPCMSNW------------TGVLCFDTVETDGHLHVRELQLLSM 96 (958)
Q Consensus 35 ~~~~~~~~al~~~k~~~~~~~~~l~~W~~~------~~c~~~w------------~gV~C~~~~~~~~~~~v~~L~L~~~ 96 (958)
++..+|+.||++||+++.+| +|+.. ++|+|+| .||+|.. ..+|+.|+|.++
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~------~~~V~~L~Ls~~ 333 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN------NGRVTGLSLAGF 333 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT------TSCEEEEECTTT
T ss_pred ccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC------CCCEEEEECccC
Confidence 34568999999999999876 67643 4666899 9999964 358999999999
Q ss_pred cCCCCccccccCCCCcceeec-cCc-ccCC--------------------------------------------------
Q 002158 97 NLSGNLAPELGQLSRLQYYFM-WND-LTGT-------------------------------------------------- 124 (958)
Q Consensus 97 ~l~~~~~~~l~~L~~L~~L~l-~n~-~~~~-------------------------------------------------- 124 (958)
++.|.+|++|++|++|+.|++ ++| +.|.
T Consensus 334 ~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~ 413 (876)
T 4ecn_A 334 GAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPE 413 (876)
T ss_dssp CCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTT
T ss_pred CCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcc
Confidence 999999999999999999999 543 2222
Q ss_pred --------------------------CCccccCCCCCcEEEeeCCCCCC-----------------CCChhhc--CCCCC
Q 002158 125 --------------------------IPKEIGNISSLIFLLLNGNKLSG-----------------SLPDELG--YLSNL 159 (958)
Q Consensus 125 --------------------------ip~~i~~l~~L~~L~Ls~n~l~~-----------------~~p~~l~--~l~~L 159 (958)
+|..|+++++|++|+|++|.++| .+|..++ ++++|
T Consensus 414 ~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 414 MKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred ccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 88899999999999999999998 3899987 99999
Q ss_pred CEEecccccccccCccccccccccceEeccccc-ccc-cCchhhcCCc-------cchhhhccCCccccCCCc--ccCCC
Q 002158 160 NRLQVDENNITGTIPKSFANLSRVRHLHLNNNS-IGG-QIPSELSKLS-------TLIHLLVDNNNLSGNLPP--ELSEL 228 (958)
Q Consensus 160 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~~~--~l~~l 228 (958)
++|+|++|++.+.+|..|.++++|+.|+|++|+ +++ .+|..+..++ +|+.|+|++|+++ .+|. .+.++
T Consensus 494 ~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L 572 (876)
T 4ecn_A 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM 572 (876)
T ss_dssp CEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC
T ss_pred CEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcC
Confidence 999999999999999999999999999999998 888 7887776655 8999999999998 6777 88888
Q ss_pred CCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCC-cCEEeccCCcCCCcCCCCCC-C--CCcCE
Q 002158 229 PQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPN-LYYLDLSWNHLTGSIPSKKL-S--ENVTT 304 (958)
Q Consensus 229 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~-~--~~L~~ 304 (958)
++|+.|+|++|+++ .+| .|+++++|+.|+|++|+++.++..+..+++ |+.|+|++|.++ .+|.... . ++|+.
T Consensus 573 ~~L~~L~Ls~N~l~--~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~ 648 (876)
T 4ecn_A 573 VKLGLLDCVHNKVR--HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGS 648 (876)
T ss_dssp TTCCEEECTTSCCC--BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEE
T ss_pred CCCCEEECCCCCcc--cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCE
Confidence 99999999998886 567 788888888888888888855556777777 888888888877 4444322 2 23666
Q ss_pred EEccCCcCCCccc-----------------------------hhccCCCCCCeEeeecccCCCccchhhhccccc---Cc
Q 002158 305 IDLSDNYLNGSIL-----------------------------ESISNLPFLQTLSLENNFLTGSIPATIWQNKSF---ST 352 (958)
Q Consensus 305 L~Ls~N~l~~~~~-----------------------------~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~---~~ 352 (958)
|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|..++....- ..
T Consensus 649 L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl 727 (876)
T 4ecn_A 649 VDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNT 727 (876)
T ss_dssp EECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTG
T ss_pred EECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccccccccc
Confidence 6666666655433 22334444444444444444 444443332110 01
Q ss_pred cccceEeccCCCCCCCccCC---CCCCcceEEeCCCCCC
Q 002158 353 KARLKIDLRNNSFSNIVGDL---TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 353 ~~l~~L~Ls~N~l~~l~~~~---~l~~L~~L~l~~N~l~ 388 (958)
+.|+.|+|++|+|+.++... .+++|+.|+|++|++.
T Consensus 728 ~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~ 766 (876)
T 4ecn_A 728 YLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFS 766 (876)
T ss_dssp GGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCS
T ss_pred CCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCC
Confidence 14445555555555554433 4555555555555554
No 81
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.3e-40 Score=364.23 Aligned_cols=272 Identities=27% Similarity=0.447 Sum_probs=220.0
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEE------CCCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceE
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGIL------SDNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSL 686 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l 686 (958)
+...+.....++|...+.||+|+||+||+|.+ .+++.||||++.... ....+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34445555677899999999999999999985 246899999997653 33456799999999999 79999999
Q ss_pred EEEEEeCC-eEEEEEEecCCCCHHHHhccCCC--------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccC
Q 002158 687 LGYCDEEG-EQMLVYEFVPNGTLRDWLSGRTK--------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRD 751 (958)
Q Consensus 687 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~D 751 (958)
++++...+ ..++||||+++|+|.+++..... ..+++.++..++.|+++||+|||+.+ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99987754 58999999999999999976542 22899999999999999999999999 99999
Q ss_pred CCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CC
Q 002158 752 IKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GM 830 (958)
Q Consensus 752 ikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~ 830 (958)
|||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||||+++|||++ |.
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CccceEEECCCCCEEECCCccccccccCcc-----ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999986532211 122234567899999999999999999999999999999998 99
Q ss_pred CCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 831 QPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 831 ~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
.||............... ......+..++..+.+++.+||+.||.+||++.|++++|+.+++..
T Consensus 249 ~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 249 SPYPGVKIDEEFCRRLKE---------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CSSTTCCCSHHHHHHHHH---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCcccchhHHHHHHhcc---------CccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 999754422222211111 1112234456678999999999999999999999999999988653
No 82
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.8e-40 Score=362.41 Aligned_cols=251 Identities=25% Similarity=0.433 Sum_probs=207.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC-C-------cEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD-N-------TTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
++|...+.||+|+||+||+|.+.. + ..||+|++........+.+.+|++++++++||||+++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 467778899999999999998753 3 57999999776666678899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC--------eEEe
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN--------AKVA 768 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~--------~kl~ 768 (958)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++. +||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999997643 34899999999999999999999999 999999999999998887 9999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
|||+++.... .....||+.|+|||++.+ ..++.++||||||+++|||++|..|+..............
T Consensus 164 Dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~ 232 (289)
T 4fvq_A 164 DPGISITVLP-----------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE 232 (289)
T ss_dssp CCCSCTTTSC-----------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred cCcccccccC-----------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh
Confidence 9999864311 123458999999999987 6789999999999999999996555543333222222111
Q ss_pred hcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 848 DSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 848 ~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
. ....+...+..+.+++.+||+.||++||+++|++++|+++..
T Consensus 233 ~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 233 D-----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp T-----------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred c-----------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 1 112233345678999999999999999999999999998764
No 83
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.4e-40 Score=362.34 Aligned_cols=256 Identities=23% Similarity=0.375 Sum_probs=201.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHc--cCCCCcceEEEEEEe----CCeEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSR--LHHRNLVSLLGYCDE----EGEQM 697 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~----~~~~~ 697 (958)
.++|...+.||+|+||+||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 35788889999999999999998 6899999998643 34566677777776 799999999999754 34689
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhh--------hcCCCCeeccCCCccceEecCCCCeEEee
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLH--------TEAHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
+||||+++|+|.++++.. .+++..+.+++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 999999999999999643 4999999999999999999999 777 99999999999999999999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccC------CCCCcchhhhHHHHHHHHHhC----------CCCC
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVLLELLTG----------MQPI 833 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~S~Gv~l~elltG----------~~P~ 833 (958)
||+++........ .........||+.|+|||++.+. .++.++|||||||++|||++| +.||
T Consensus 157 fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 157 LGLAVMHSQSTNQ---LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp CTTCEEEETTTTE---EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred CCCeeeccccccc---ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 9999765332211 01112234699999999999876 455799999999999999999 7888
Q ss_pred CCCch---hHHHHHHHhhcCcchhhhcccCCC-----CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 834 SHGKN---IVREVNVARDSGMVFSIIDNRMGS-----YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 834 ~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
..... ........... ...... .+..++..+.+++.+||+.||++|||++|+++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPSFEDMRKVVCV-------DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCCHHHHHHHHTT-------SCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcchhhhhHHHhc-------cCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 54221 11111111100 111111 2346788999999999999999999999999999875
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7e-40 Score=357.64 Aligned_cols=259 Identities=24% Similarity=0.327 Sum_probs=202.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChh--cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|.+.+++.||||++...... ..+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 367788999999999999999988999999998754322 236788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ ++|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (288)
T 1ob3_A 82 LD-QDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-- 154 (288)
T ss_dssp CS-EEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc--
Confidence 97 49999997543 34899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-----hh--
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV-----FS-- 854 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~-----~~-- 854 (958)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||................+.. ..
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 155 -----RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred -----cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhh
Confidence 112334689999999999764 58999999999999999999999997655433222221110000 00
Q ss_pred ---hhcccC--------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 ---IIDNRM--------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ---~i~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+... .......+..+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 01123456788999999999999999999999864
No 85
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.3e-40 Score=365.06 Aligned_cols=266 Identities=26% Similarity=0.509 Sum_probs=216.6
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC--------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS--------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDE 692 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 692 (958)
..++|...+.||+|+||+||+|.+. ++..||||++.... ....+++.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3467888899999999999999873 46789999997653 34456799999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCC--------------CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceE
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSGRTK--------------ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNIL 758 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NIL 758 (958)
.+..++||||+++|+|.+++..... ..+++.+++.++.|+++||+|||+.+ |+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 9999999999999999999976432 24899999999999999999999999 999999999999
Q ss_pred ecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCc
Q 002158 759 LDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGK 837 (958)
Q Consensus 759 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~ 837 (958)
++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSS-----EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EcCCCCEEEcccccccccccccc-----ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 99999999999999986532211 112233457889999999999999999999999999999999 999997543
Q ss_pred hhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 838 NIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
. ......... ......+..++..+.+++.+||+.||.+||+++|+++.|++++...+..
T Consensus 265 ~-~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 265 V-EELFKLLKE---------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp H-HHHHHHHHH---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred H-HHHHHHHhc---------CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 2 221111111 1112334566788999999999999999999999999999998765543
No 86
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=363.73 Aligned_cols=261 Identities=29% Similarity=0.473 Sum_probs=207.1
Q ss_pred CCCCCceeeeeCCeEEEEEEECC-----CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSD-----NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
+|...+.||+|+||+||+|.+.. +..||||++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 45567899999999999998753 2469999997653 34456799999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.+++.... ..+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999997543 35899999999999999999999999 999999999999999999999999999865322
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
... ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... ...... ..
T Consensus 201 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-~~~~~~---------~~ 266 (333)
T 1mqb_A 201 PEA----TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-VMKAIN---------DG 266 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHH---------TT
T ss_pred ccc----ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH-HHHHHH---------CC
Confidence 111 111223346788999999999999999999999999999999 999997544321 111111 11
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
.....+..++..+.+++.+||+.||++||++.++++.|+++.+...
T Consensus 267 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 267 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 1122345667889999999999999999999999999999886543
No 87
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=359.59 Aligned_cols=265 Identities=23% Similarity=0.297 Sum_probs=211.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC--eEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG--EQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~ 700 (958)
.+|...+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 46778889999999999999987 58999999997543 334567889999999999999999999998765 789999
Q ss_pred EecCCCCHHHHhccCCC-CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe----cCCCCeEEeeeeeecc
Q 002158 701 EFVPNGTLRDWLSGRTK-ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL----DSNLNAKVADFGLSRL 775 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl----~~~~~~kl~DFGla~~ 775 (958)
||+++++|.+++..... ..+++.++..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999976432 33899999999999999999999999 9999999999999 7888899999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhc--------cCCCCCcchhhhHHHHHHHHHhCCCCCCCCc---hhHHHHH
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFL--------THKLTDKSDVYSLGVVLLELLTGMQPISHGK---NIVREVN 844 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~---~~~~~~~ 844 (958)
..... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.... .....+.
T Consensus 166 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 237 (319)
T 4euu_A 166 LEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237 (319)
T ss_dssp CCTTC--------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHH
T ss_pred cCCCC--------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHH
Confidence 53321 122356999999999986 4678999999999999999999999996322 1111111
Q ss_pred HHhhcC---cchhh---------hc---ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhH
Q 002158 845 VARDSG---MVFSI---------ID---NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENIL 900 (958)
Q Consensus 845 ~~~~~~---~~~~~---------i~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 900 (958)
...... ..... .. +.....+...+..+.+++.+||+.||++||+++|++++..+..
T Consensus 238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 111100 00000 00 0112345788999999999999999999999999999988743
No 88
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.9e-40 Score=367.70 Aligned_cols=245 Identities=22% Similarity=0.293 Sum_probs=207.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 46778899999999999999986 68999999986532 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~-- 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-- 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS--
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccC--
Confidence 9999999999997643 3899999999999999999999999 99999999999999999999999999986521
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... ..
T Consensus 194 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~----------~~ 254 (350)
T 1rdq_E 194 --------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIVS----------GK 254 (350)
T ss_dssp --------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH----------CC
T ss_pred --------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-HHHHHHc----------CC
Confidence 1223569999999999999999999999999999999999999997544322 2111111 11
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
..+|..++..+.+++.+||+.||.+||+ ++|++++
T Consensus 255 ~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 2345566788999999999999999998 8888764
No 89
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.4e-40 Score=363.31 Aligned_cols=271 Identities=26% Similarity=0.432 Sum_probs=214.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-----CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-----DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQM 697 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 697 (958)
+|...+.||+|+||+||++.++ +++.||||++.... ....+.+.+|++++++++||||+++++++... ...+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 3477889999999999998753 58899999998653 34456799999999999999999999999874 6789
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++|+|.+++.... +++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 112 lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 9999999999999997543 899999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH----hhcCcch
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA----RDSGMVF 853 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~----~~~~~~~ 853 (958)
.... .........||..|+|||++.+..++.++||||||+++|||++|+.||............. .......
T Consensus 186 ~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 186 EGHE----YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 261 (318)
T ss_dssp TTCS----EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHH
T ss_pred cccc----ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHH
Confidence 3211 1122334568888999999999999999999999999999999999996432111100000 0000011
Q ss_pred hhhc-ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 854 SIID-NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 854 ~~i~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
+.+. ......+..++..+.+++.+||+.||++||+++|+++.|+.+.+.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 1111 1123445667889999999999999999999999999999998766543
No 90
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=367.50 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=193.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.++|...+.||+|+||+||+|.+. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 457888899999999999999987 58899999997643 345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEeeeeeecccccC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~DFGla~~~~~~ 779 (958)
+++|+|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 130 VTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999997543 4899999999999999999999999 999999999999975 889999999999864321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||................... .
T Consensus 205 --------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~------~ 270 (349)
T 2w4o_A 205 --------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY------F 270 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC------C
T ss_pred --------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc------c
Confidence 11234569999999999999999999999999999999999999997654433222222111100 0
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........+..+.+++.+||+.||++||++.|++++
T Consensus 271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011223456789999999999999999999999874
No 91
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=375.21 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=206.9
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
..++|...+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4567888999999999999999976 78999999987653 23345789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec---CCCCeEEeeeeeeccc
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD---SNLNAKVADFGLSRLA 776 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~---~~~~~kl~DFGla~~~ 776 (958)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++ .++.+||+|||+++..
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999997654 4899999999999999999999999 99999999999998 4678999999999765
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
.... .......||+.|+|||++.+..++.++||||+||++|||++|..||.+...... ...........
T Consensus 164 ~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~~~~~~--- 232 (444)
T 3soa_A 164 EGEQ-------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL-YQQIKAGAYDF--- 232 (444)
T ss_dssp CTTC-------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCCCC---
T ss_pred cCCC-------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHhCCCCC---
Confidence 3211 112345799999999999999999999999999999999999999976543222 11111111000
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......++..+.+++.+||+.||++||+++|++++
T Consensus 233 ---~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 ---PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 001112456789999999999999999999999975
No 92
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-40 Score=369.19 Aligned_cols=246 Identities=25% Similarity=0.364 Sum_probs=205.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+|...+.||+|+||+||+|.+. +++.||||++.... ......+.+|+++++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 36777889999999999999974 78999999986432 122357889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+ +|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 89 E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred ECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 999 789999987544 4899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+... ......+...
T Consensus 163 --------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----------~~~~~~i~~~ 223 (336)
T 3h4j_B 163 --------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI-----------PNLFKKVNSC 223 (336)
T ss_dssp --------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS-----------TTCBCCCCSS
T ss_pred --------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH-----------HHHHHHHHcC
Confidence 1233569999999999988776 6799999999999999999999964321 1111222222
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....|...+..+.+++.+||+.||.+|||++|++++
T Consensus 224 ~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 224 VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 334466677889999999999999999999999975
No 93
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.9e-40 Score=368.06 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=204.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-----hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-----LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
.+.|...+.||+|+||+||+|.++ +++.||||++.... ....+.+.+|+++++.++||||+++++++..++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 346888899999999999999986 68999999985421 124567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC---eEEeeeee
Q 002158 698 LVYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN---AKVADFGL 772 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~---~kl~DFGl 772 (958)
+||||+++++|.+++.... ...+++..+..++.|+++||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998886432 335899999999999999999999999 999999999999987655 99999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........
T Consensus 180 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~~~--- 247 (351)
T 3c0i_A 180 AIQLGESG-------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKG--- 247 (351)
T ss_dssp CEECCTTS-------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHHHT---
T ss_pred eeEecCCC-------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHHcC---
Confidence 98653211 112345699999999999999999999999999999999999999976432 111111110
Q ss_pred hhhhcccCCCCC----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIIDNRMGSYP----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ..+ ..++..+.+++.+||+.||++||++.|++++
T Consensus 248 ------~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 248 ------KY-KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp ------CC-CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------CC-CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 111 1345788999999999999999999999874
No 94
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.2e-40 Score=361.86 Aligned_cols=269 Identities=26% Similarity=0.450 Sum_probs=210.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-----CCCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC--CeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-----SDNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE--GEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 696 (958)
.+|...+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3577788999999999999984 368999999987543 33457799999999999999999999999876 678
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccc
Confidence 99999999999999996543 34899999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC----cc
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG----MV 852 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~----~~ 852 (958)
..... .........||..|+|||++.+..++.++||||+|+++|||++|..|+................. ..
T Consensus 177 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 177 ETDKE----YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CTTCC----EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cCCCc----ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 43221 11223345688889999999999999999999999999999999998743221111100000000 00
Q ss_pred hh-hhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 853 FS-IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 853 ~~-~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
.. .........+..++..+.+++.+||+.||.+|||++++++.|+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 01 11112233456677899999999999999999999999999998763
No 95
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1e-39 Score=356.08 Aligned_cols=253 Identities=34% Similarity=0.581 Sum_probs=205.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc-------HHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG-------QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
++|...+.||+|+||+||+|.+. +++.||||++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 46777889999999999999985 78999999986543221 157899999999999999999999997654
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC-----eEEeeee
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN-----AKVADFG 771 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~-----~kl~DFG 771 (958)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ ++|+||||||+||+++.++. +||+|||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 79999999999999987543 35999999999999999999999876 46999999999999988776 9999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhc--cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHH-HHHHhh
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVRE-VNVARD 848 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~-~~~~~~ 848 (958)
+++... .......||+.|+|||++. ...++.++||||||+++|||++|+.||......... ......
T Consensus 175 ~~~~~~----------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 244 (287)
T 4f0f_A 175 LSQQSV----------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244 (287)
T ss_dssp TCBCCS----------SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH
T ss_pred cccccc----------ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc
Confidence 987431 1233456999999999984 455788999999999999999999999754322111 111111
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENI 899 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 899 (958)
. ......+..++..+.+++.+||+.||++||+++|+++.|+++
T Consensus 245 ~--------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 245 E--------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp S--------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred c--------CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1 111234566778999999999999999999999999998763
No 96
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-40 Score=372.00 Aligned_cols=265 Identities=32% Similarity=0.511 Sum_probs=203.3
Q ss_pred CCCCCceeeeeCCeEEEEEEEC--CC--cEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe-CCeEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS--DN--TTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE-EGEQMLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lV 699 (958)
.|...+.||+|+||+||+|.+. ++ ..||||.++.. .....++|.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3455678999999999999864 22 46899998754 33456789999999999999999999999754 5678999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.++++... ..+++.++..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999997543 34889999999999999999999999 999999999999999999999999999865322
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~ 858 (958)
... .........||+.|+|||++.+..++.++||||||+++|||++ |..||........... . ...
T Consensus 246 ~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~-~---------~~~ 312 (373)
T 3c1x_A 246 EFD---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-L---------LQG 312 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH-H---------HTT
T ss_pred ccc---cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH-H---------HcC
Confidence 111 1112234567889999999999999999999999999999999 6777764332111111 1 111
Q ss_pred cCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCCC
Q 002158 859 RMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPETD 907 (958)
Q Consensus 859 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 907 (958)
.....+..++..+.+++.+||+.||++||+++|+++.|+++...+....
T Consensus 313 ~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 313 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 1223355677889999999999999999999999999999998777543
No 97
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.3e-40 Score=365.88 Aligned_cols=257 Identities=21% Similarity=0.318 Sum_probs=206.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 699 (958)
++|...+.||+|+||+||+|+++ +++.||||++... .....+.+.+|..+++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46778899999999999999986 5889999999754 233445688999999988 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999997543 4899999999999999999999999 999999999999999999999999999753211
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........... .......+.+...
T Consensus 164 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~~~~~~i~~~ 234 (345)
T 3a8x_A 164 G-------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--NTEDYLFQVILEK 234 (345)
T ss_dssp T-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------CHHHHHHHHHHC
T ss_pred C-------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc--ccHHHHHHHHHcC
Confidence 1 123346799999999999999999999999999999999999999964211100000 0000011112222
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCH------HHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSM------SDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~ 895 (958)
...+|...+..+.+++.+||+.||++||++ +|++++
T Consensus 235 ~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 235 QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 234456677889999999999999999995 566653
No 98
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.8e-40 Score=367.35 Aligned_cols=258 Identities=26% Similarity=0.424 Sum_probs=206.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcE----EEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTT----VAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
++|...+.||+|+||+||+|.+. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 35777889999999999999975 3443 7888875432 223346788999999999999999999986 457899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999754 335899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ........||..|+|||++.+..++.++||||||+++|||++ |+.||......... .....
T Consensus 168 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~--------- 232 (325)
T 3kex_A 168 DDK-----QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP-DLLEK--------- 232 (325)
T ss_dssp CTT-----CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH-HHHHT---------
T ss_pred ccc-----cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH-HHHHc---------
Confidence 222 112234568889999999999999999999999999999999 99999754322111 11111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
......+..++..+.+++.+||+.||.+||++++++++|+.+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 233 GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111223445566789999999999999999999999999998643
No 99
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=354.90 Aligned_cols=261 Identities=26% Similarity=0.435 Sum_probs=212.9
Q ss_pred CCCCCc-eeeeeCCeEEEEEEEC---CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 626 YFSSST-QVGQGGYGKVYKGILS---DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 626 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
+|...+ .||+|+||.||+|.+. ++..||||+++.. .....+++.+|++++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 344444 8999999999999864 5788999999875 344567799999999999999999999999 456799999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++... ...+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 89 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp ECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999744 345899999999999999999999999 9999999999999999999999999998653222
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.. ........||+.|+|||++.+..++.++||||||+++|||++ |+.||........ ..... ...
T Consensus 165 ~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~i~---------~~~ 230 (287)
T 1u59_A 165 SY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIE---------QGK 230 (287)
T ss_dssp CE----ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH-HHHHH---------TTC
T ss_pred ce----eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-HHHHh---------cCC
Confidence 11 111223457889999999998899999999999999999999 9999975443221 11111 111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
....+..++..+.+++.+||+.||++||++.+++++|+++......
T Consensus 231 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 231 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 2334566778999999999999999999999999999999866543
No 100
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.8e-40 Score=368.09 Aligned_cols=250 Identities=25% Similarity=0.383 Sum_probs=207.4
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 696 (958)
...++|...+.||+|+||+||+|+++ +++.||||+++... ....+.+..|.++++.+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 44567888999999999999999986 68999999997532 23355678899999987 899999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++|+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999997543 4899999999999999999999999 999999999999999999999999999753
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......
T Consensus 169 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~--------- 231 (345)
T 1xjd_A 169 MLGD-------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-ELFHSIR--------- 231 (345)
T ss_dssp CCTT-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH---------
T ss_pred ccCC-------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHH---------
Confidence 2211 1233467999999999999999999999999999999999999999754432 2221111
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMS-DVVR 894 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 894 (958)
.....+|...+..+.+++.+||+.||++||++. ++.+
T Consensus 232 -~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 232 -MDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp -HCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred -hCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 111234555678899999999999999999997 6664
No 101
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.4e-40 Score=370.04 Aligned_cols=271 Identities=20% Similarity=0.266 Sum_probs=215.7
Q ss_pred CCccccChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-----CCCc
Q 002158 610 DGVKGFKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-----HRNL 683 (958)
Q Consensus 610 ~~~~~~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~ni 683 (958)
+....+++++.....++|...+.||+|+||+||+|.+. +++.||||++.. .....+.+..|+++++.++ ||||
T Consensus 20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 34566777777777889999999999999999999985 689999999975 3344566788999999996 9999
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC--
Q 002158 684 VSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-- 761 (958)
Q Consensus 684 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-- 761 (958)
+++++++...+..++||||+ +++|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPY 174 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTT
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccc
Confidence 99999999999999999999 999999998776666999999999999999999999999 999999999999975
Q ss_pred -----------------------CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhh
Q 002158 762 -----------------------NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYS 818 (958)
Q Consensus 762 -----------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S 818 (958)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 244 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD----------YHGSIINTRQYRAPEVILNLGWDVSSDMWS 244 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS----------CCCSCCSCGGGCCHHHHTTCCCCTTHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCC----------CCcCccCcccccCcHHHcCCCCCCccchHH
Confidence 78999999999985422 112356899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch-hh------------hc-----ccCCCCC----------------
Q 002158 819 LGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF-SI------------ID-----NRMGSYP---------------- 864 (958)
Q Consensus 819 ~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~~------------i~-----~~~~~~~---------------- 864 (958)
|||++|||++|+.||................+... .. .. ...+...
T Consensus 245 lG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 324 (360)
T 3llt_A 245 FGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLY 324 (360)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccccc
Confidence 99999999999999976543322111111000000 00 00 0000000
Q ss_pred -hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 865 -SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 865 -~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+.+.+++.+||+.||++|||++|++++
T Consensus 325 ~~~~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 325 KIIKHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ccchHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0012567899999999999999999999863
No 102
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8e-40 Score=359.05 Aligned_cols=249 Identities=27% Similarity=0.384 Sum_probs=197.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--------------------------cHHHHHHHHHHHHc
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--------------------------GQNEFLTEIKLLSR 677 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~ 677 (958)
++|...+.||+|+||.||+|.+. +++.||||++...... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 46778889999999999999976 6889999998654311 12468899999999
Q ss_pred cCCCCcceEEEEEEe--CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCcc
Q 002158 678 LHHRNLVSLLGYCDE--EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKAS 755 (958)
Q Consensus 678 l~H~niv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~ 755 (958)
++||||+++++++.. .+..++||||+++++|.+++.. ..+++.++..++.|+++||+|||+++ |+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHH
Confidence 999999999999986 5689999999999999887643 34899999999999999999999999 999999999
Q ss_pred ceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCC---CCCcchhhhHHHHHHHHHhCCCC
Q 002158 756 NILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVLLELLTGMQP 832 (958)
Q Consensus 756 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~S~Gv~l~elltG~~P 832 (958)
|||++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.|
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 239 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD-------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS-------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred HEEECCCCCEEEecCCCcccccccc-------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 9999999999999999998653211 1223456999999999997765 36789999999999999999999
Q ss_pred CCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 833 ISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
|....... ........... ......++..+.+++.+||+.||++||+++|++++
T Consensus 240 f~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 240 FMDERIMC-LHSKIKSQALE--------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SCCSSHHH-HHHHHHHCCCC--------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred CCCccHHH-HHHHHhcccCC--------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 97544321 11111111000 01123456789999999999999999999999864
No 103
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=370.29 Aligned_cols=247 Identities=26% Similarity=0.393 Sum_probs=205.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46788899999999999999986 58899999986532 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp CCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 9999999999997543 4999999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCCccceeeeeccCCCCccChhhhcc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcCcchhh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVLLELLTGMQPISHGKN--IVREVNVARDSGMVFSI 855 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~--~~~~~~~~~~~~~~~~~ 855 (958)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .......
T Consensus 169 -------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~---------- 231 (384)
T 4fr4_A 169 -------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT---------- 231 (384)
T ss_dssp -------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHH----------
T ss_pred -------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHH----------
Confidence 12234679999999999974 4588999999999999999999999974322 1111111
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPS-MSDVVR 894 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 894 (958)
+......+|..++..+.+++.+||+.||.+||+ ++++.+
T Consensus 232 ~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 232 FETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 112223446667788999999999999999998 677664
No 104
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.1e-39 Score=354.67 Aligned_cols=259 Identities=23% Similarity=0.349 Sum_probs=204.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|+..+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 36778899999999999999986 68999999987543 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++ ++.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 9975 6666665433 34999999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh-cCcc----hhh
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD-SGMV----FSI 855 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~-~~~~----~~~ 855 (958)
.......||+.|+|||++.+.. ++.++||||+||++|||++|..||..+............ .+.. ...
T Consensus 156 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 229 (292)
T 3o0g_A 156 ------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229 (292)
T ss_dssp ------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTT
T ss_pred ------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence 1123356899999999998766 799999999999999999998887655544333322211 0000 000
Q ss_pred h--------------cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 I--------------DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ...........+..+.+++.+|++.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000111223466788999999999999999999999874
No 105
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.5e-39 Score=361.59 Aligned_cols=248 Identities=21% Similarity=0.297 Sum_probs=198.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEE----CCCcEEEEEEeccCC----hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL----SDNTTVAIKRAEEGS----LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
++|...+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++..++..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5688889999999999999997 478999999997642 22345678999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++++|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999997543 4889999999999999999999999 999999999999999999999999998753
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ......
T Consensus 172 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~-------- 235 (327)
T 3a62_A 172 IHDG-------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-IDKILK-------- 235 (327)
T ss_dssp --------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH--------
T ss_pred ccCC-------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHh--------
Confidence 2111 122345799999999999999999999999999999999999999975443221 111111
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.....+...+..+.+++.+||+.||++|| +++|++++
T Consensus 236 --~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 236 --CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --TCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11233555678899999999999999999 77888764
No 106
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=370.76 Aligned_cols=271 Identities=15% Similarity=0.177 Sum_probs=212.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC---------CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcce----------
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD---------NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVS---------- 685 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~---------- 685 (958)
++|...+.||+|+||+||+|.+.. ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578888999999999999999864 789999998754 35789999999999999987
Q ss_pred -----EEEEEEe-CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 686 -----LLGYCDE-EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 686 -----l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
+++++.. ++..++||||+ +++|.+++.......+++.++..++.|++.||+|||+++ |+||||||+|||+
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEE
Confidence 6778776 67899999999 999999998764456999999999999999999999999 9999999999999
Q ss_pred cCCC--CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc
Q 002158 760 DSNL--NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK 837 (958)
Q Consensus 760 ~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~ 837 (958)
+.++ .+||+|||+++....................||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 89999999998764433221111222234579999999999999999999999999999999999999997543
Q ss_pred hhHHHHHHHhh--cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 838 NIVREVNVARD--SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 838 ~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
.....+..... ........... ......+..+.+++.+||+.||++||+++++++.|+++++.....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 273 PNTEDIMKQKQKFVDKPGPFVGPC--GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp TCHHHHHHHHHHHHHSCCCEECTT--SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHhccCChhhhhhhc--cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 11111111110 00000000000 001134678999999999999999999999999999999776543
No 107
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.4e-39 Score=356.94 Aligned_cols=265 Identities=32% Similarity=0.511 Sum_probs=209.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEE-eCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCD-EEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~l 698 (958)
.+|...+.||+|+||+||+|.+.+ ...||||.+... .....+.+.+|++++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356677899999999999999643 236899998764 3344567999999999999999999999964 4568899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++|+|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999997543 45899999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ..........||+.|+|||.+.+..++.++||||+|+++|||++ |.+||........... . ..
T Consensus 181 ~~~---~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~-~---------~~ 247 (298)
T 3f66_A 181 KEY---YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-L---------LQ 247 (298)
T ss_dssp GGG---CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHH-H---------HT
T ss_pred cch---hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHH-H---------hc
Confidence 221 11222334568889999999999999999999999999999999 5555543332211111 1 11
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
......+..++..+.+++.+||+.||++||+++|+++.|+++.+.+...
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 1122234556778999999999999999999999999999999877654
No 108
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=369.28 Aligned_cols=247 Identities=23% Similarity=0.322 Sum_probs=200.0
Q ss_pred CceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 630 STQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
.+.||+|+||.||+|... +|+.||||+++.......+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999975 6899999999887666777899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe--cCCCCeEEeeeeeecccccCCCCCCcc
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL--DSNLNAKVADFGLSRLAPVLDDEGTMP 786 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl--~~~~~~kl~DFGla~~~~~~~~~~~~~ 786 (958)
.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 174 ~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~------ 243 (373)
T 2x4f_A 174 FDRIIDES-YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE------ 243 (373)
T ss_dssp HHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC------
T ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc------
Confidence 99987543 34899999999999999999999999 9999999999999 567899999999998653221
Q ss_pred ceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChH
Q 002158 787 THVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSE 866 (958)
Q Consensus 787 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 866 (958)
......||+.|+|||++.+..++.++|||||||++|||++|+.||................... . ......
T Consensus 244 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~---~----~~~~~~ 314 (373)
T 2x4f_A 244 --KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL---E----DEEFQD 314 (373)
T ss_dssp --BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCS---C----SGGGTT
T ss_pred --ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC---C----hhhhcc
Confidence 1223469999999999998899999999999999999999999997654332221111110000 0 001123
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 867 CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 867 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
++.++.+++.+||+.||++||+++|++++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 46788999999999999999999999974
No 109
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.2e-40 Score=376.43 Aligned_cols=260 Identities=20% Similarity=0.284 Sum_probs=210.0
Q ss_pred hHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEe
Q 002158 617 FKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDE 692 (958)
Q Consensus 617 ~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 692 (958)
++++....++|...+.||+|+||+||+|+++ +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455566788999999999999999999987 588999999865211 122357899999999999999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
++..++||||+++|+|.++++.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence 99999999999999999999754 3889999999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCC----CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~ 848 (958)
++...... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ ......
T Consensus 215 a~~~~~~~------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~ 287 (410)
T 3v8s_A 215 CMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YSKIMN 287 (410)
T ss_dssp CEECCTTS------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHT
T ss_pred eEeeccCC------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-HHHHHh
Confidence 98653211 12233567999999999998765 78899999999999999999999975443222 111111
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEH--RPSMSDVVRE 895 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 895 (958)
... . ... .....++.++.+++.+|++.+|.+ ||+++||+++
T Consensus 288 ~~~--~---~~~-p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 288 HKN--S---LTF-PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHH--H---CCC-CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ccc--c---ccC-CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 000 0 000 111245678899999999999988 9999999976
No 110
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.3e-39 Score=360.51 Aligned_cols=261 Identities=22% Similarity=0.361 Sum_probs=192.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
..+|...+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 357888899999999999999976 689999999875432 234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCC----CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 702 FVPNGTLRDWLSGRT----KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
|++ |+|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 69999986432 235899999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc----c
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM----V 852 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~----~ 852 (958)
... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||................+. .
T Consensus 160 ~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 160 IPV-------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232 (317)
T ss_dssp SCC-------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTT
T ss_pred CCc-------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhH
Confidence 211 112234689999999999764 6899999999999999999999999765543222111111000 0
Q ss_pred hhhhc------ccC-------------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIID------NRM-------------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~------~~~-------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+. ... ...+...+..+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00000 000 00111345689999999999999999999999864
No 111
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1e-39 Score=363.74 Aligned_cols=257 Identities=25% Similarity=0.405 Sum_probs=200.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC-------
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG------- 694 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------- 694 (958)
.++|+..+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 346788899999999999999987 79999999997543 334567999999999999999999999986543
Q ss_pred --------------------------------------------------eEEEEEEecCCCCHHHHhccCCC-CCchHH
Q 002158 695 --------------------------------------------------EQMLVYEFVPNGTLRDWLSGRTK-ENLNFA 723 (958)
Q Consensus 695 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~ 723 (958)
..++||||+++++|.+++..... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999986542 335667
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc-----cceeeeeccCCCC
Q 002158 724 MRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM-----PTHVSTIVKGTPG 798 (958)
Q Consensus 724 ~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~-----~~~~~~~~~gt~~ 798 (958)
.+++++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++........... .........||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999999 999999999999999999999999999876433211110 0112234569999
Q ss_pred ccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHc
Q 002158 799 YLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRC 878 (958)
Q Consensus 799 y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~c 878 (958)
|+|||++.+..++.++||||||+++|||++|..|+.... ........ ...+......+..+.+++.+|
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~~~~~~~~li~~~ 309 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV---RIITDVRN---------LKFPLLFTQKYPQEHMMVQDM 309 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH---HHHHHHHT---------TCCCHHHHHHCHHHHHHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH---HHHHHhhc---------cCCCcccccCChhHHHHHHHH
Confidence 999999999999999999999999999999877653111 11111111 111111234556789999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 002158 879 CHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 879 l~~dP~~RPs~~evl~~ 895 (958)
|+.||++||+++|++++
T Consensus 310 l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 310 LSPSPTERPEATDIIEN 326 (332)
T ss_dssp HCSSGGGSCCHHHHHHS
T ss_pred ccCCCCcCCCHHHHhhc
Confidence 99999999999999974
No 112
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=357.84 Aligned_cols=261 Identities=26% Similarity=0.328 Sum_probs=203.3
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-----hhcHHHHHHHHHHHHcc---CCCCcceEEEEEEeC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-----LQGQNEFLTEIKLLSRL---HHRNLVSLLGYCDEE 693 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~ 693 (958)
..++|...+.||+|+||+||+|++. +++.||||++.... ......+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4678999999999999999999974 78999999986422 11134567788777776 499999999999876
Q ss_pred C-----eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEe
Q 002158 694 G-----EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 694 ~-----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
. ..++||||++ ++|.+++.......+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEe
Confidence 5 5799999996 69999998776666999999999999999999999999 9999999999999999999999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~ 848 (958)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 163 Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~ 234 (308)
T 3g33_A 163 DFGLARIYSYQ--------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 234 (308)
T ss_dssp SCSCTTTSTTC--------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHH
T ss_pred eCccccccCCC--------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 99999865321 1123457999999999999999999999999999999999999999765543322222111
Q ss_pred cCcchhh-h-------cccCC--------CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 849 SGMVFSI-I-------DNRMG--------SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 849 ~~~~~~~-i-------~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+..... . ..... ......+..+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 1100000 0 00000 0112355788999999999999999999999964
No 113
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6e-40 Score=406.74 Aligned_cols=339 Identities=27% Similarity=0.339 Sum_probs=253.0
Q ss_pred hhcCCCCHhHHHHHHHHHHHcccCccccCCCCCCCCCCCCCCceeeCccccCCCceeeEEEEccCCcCCCC---cccccc
Q 002158 31 AAAQTTDPQEASALRAIKNSLVDSMNHLRNWNKGDPCMSNWTGVLCFDTVETDGHLHVRELQLLSMNLSGN---LAPELG 107 (958)
Q Consensus 31 ~~~~~~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~---~~~~l~ 107 (958)
++++...++|++||++||+++.||. .+++|+.+++|| .|.||+|. ..+|+.|+|+++++.|. ++++++
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C-~w~gv~C~-------~~~v~~L~L~~~~l~g~~~~l~~~l~ 74 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPC-TFDGVTCR-------DDKVTSIDLSSKPLNVGFSAVSSSLL 74 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGG-GSTTEEEE-------TTEEEEEECTTSCCCEEHHHHHHHTT
T ss_pred CccccCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCc-CCcceEEC-------CCcEEEEECCCCCcCCccCccChhHh
Confidence 4455557899999999999999987 899998666654 89999995 24899999999999998 888898
Q ss_pred CCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCCh--hhcCCCCCCEEecccccccccCcccc-ccccccc
Q 002158 108 QLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPD--ELGYLSNLNRLQVDENNITGTIPKSF-ANLSRVR 184 (958)
Q Consensus 108 ~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~ 184 (958)
+|++|+.++++.+....+|..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|+
T Consensus 75 ~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 154 (768)
T 3rgz_A 75 SLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLE 154 (768)
T ss_dssp TCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCS
T ss_pred ccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCC
Confidence 88888888887666556778888888999999999988888888 88888889999999888888777765 7888888
Q ss_pred eEecccccccccCchh---hcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEc
Q 002158 185 HLHLNNNSIGGQIPSE---LSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSL 261 (958)
Q Consensus 185 ~L~Ls~N~l~~~~p~~---l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L 261 (958)
+|+|++|.+++..|.. +.++++|++|++++|++++..+. ..+++|++|+|++|++++ .+|. ++++++|++|+|
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~-~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFST-GIPF-LGDCSALQHLDI 230 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCS-CCCB-CTTCCSCCEEEC
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCC-CCcc-cccCCCCCEEEC
Confidence 8888888888777766 67777777777777777765443 667777777777777763 3444 777777777777
Q ss_pred ccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCC-CCCCeEeeecccCCCc
Q 002158 262 RNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNL-PFLQTLSLENNFLTGS 339 (958)
Q Consensus 262 ~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~ 339 (958)
++|++++..+. +..+++|++|+|++|.+++.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|.+++.
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~ 309 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEEC
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCc
Confidence 77777765553 777777777777777776655554 55677777777777776666666554 6777777777777766
Q ss_pred cchhhhcccccCccccceEeccCCCCC-CCccC--CCCCCcceEEeCCCCCC
Q 002158 340 IPATIWQNKSFSTKARLKIDLRNNSFS-NIVGD--LTLPNNVTLRLGGNPIC 388 (958)
Q Consensus 340 ip~~l~~~~~~~~~~l~~L~Ls~N~l~-~l~~~--~~l~~L~~L~l~~N~l~ 388 (958)
+|..+..+. .|++|+|++|+++ .++.. ..+++|+.|++++|.+.
T Consensus 310 ~p~~~~~l~-----~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~ 356 (768)
T 3rgz_A 310 VPPFFGSCS-----LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 356 (768)
T ss_dssp CCGGGGGCT-----TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEE
T ss_pred cchHHhcCC-----CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccC
Confidence 666665543 3446777777666 45543 26666677777666653
No 114
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-39 Score=360.52 Aligned_cols=295 Identities=27% Similarity=0.492 Sum_probs=217.9
Q ss_pred CCCHhHHHHHHHHHHHcccCccccCCCCCCCCCC-CCCCceeeCccccCCCceeeEEEEccCCcCCC--CccccccCCCC
Q 002158 35 TTDPQEASALRAIKNSLVDSMNHLRNWNKGDPCM-SNWTGVLCFDTVETDGHLHVRELQLLSMNLSG--NLAPELGQLSR 111 (958)
Q Consensus 35 ~~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~-~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~--~~~~~l~~L~~ 111 (958)
.|.++|++||++||+++.||. .+++|+.+++|| +.|.||+|.... ...+|+.|+|+++++.+ .+|+.++++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~---~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~ 77 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDT---QTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSS---SCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCC---CCceEEEEECCCCCccCCcccChhHhCCCC
Confidence 588999999999999998876 789998654443 459999996431 12589999999999999 88888888888
Q ss_pred cceeecc--CcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecc
Q 002158 112 LQYYFMW--NDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLN 189 (958)
Q Consensus 112 L~~L~l~--n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 189 (958)
|++|+++ |++.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|++++.+|..|..+++|++|+|+
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 8888886 66777888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cccccccCchhhcCCc-cchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCC
Q 002158 190 NNSIGGQIPSELSKLS-TLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQG 268 (958)
Q Consensus 190 ~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~ 268 (958)
+|.+++.+|..+..++ +|++|++++|++++.+|..+..++ |++|+|++|+++ ...|..+..+++|+.|+|++|++++
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE-GDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE-ECCGGGCCTTSCCSEEECCSSEECC
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc-CcCCHHHhcCCCCCEEECCCCceee
Confidence 8888888888888887 788888888888877777777776 777777777776 3456666666666666666666665
Q ss_pred CCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhccc
Q 002158 269 AVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNK 348 (958)
Q Consensus 269 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~ 348 (958)
.++.+..+++|++|+|++|+++ +.+|..|..+++|++|+|++|+++|.+|.. ..
T Consensus 236 ~~~~~~~l~~L~~L~Ls~N~l~-----------------------~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~-- 289 (313)
T 1ogq_A 236 DLGKVGLSKNLNGLDLRNNRIY-----------------------GTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GN-- 289 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCE-----------------------ECCCGGGGGCTTCCEEECCSSEEEEECCCS-TT--
T ss_pred ecCcccccCCCCEEECcCCccc-----------------------CcCChHHhcCcCCCEEECcCCcccccCCCC-cc--
Confidence 5544544555555555555554 445555555555555555555555555543 11
Q ss_pred ccCccccceEeccCCC
Q 002158 349 SFSTKARLKIDLRNNS 364 (958)
Q Consensus 349 ~~~~~~l~~L~Ls~N~ 364 (958)
.+.++.|++++|+
T Consensus 290 ---l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 290 ---LQRFDVSAYANNK 302 (313)
T ss_dssp ---GGGSCGGGTCSSS
T ss_pred ---ccccChHHhcCCC
Confidence 2233455555555
No 115
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.9e-40 Score=365.74 Aligned_cols=269 Identities=25% Similarity=0.442 Sum_probs=218.7
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC------CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEE
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS------DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLL 687 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~ 687 (958)
+..+++....++|...+.||+|+||.||+|.+. .++.||||++.... .....+|.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 334455556778999999999999999999864 36789999997643 34456799999999999999999999
Q ss_pred EEEEeCCeEEEEEEecCCCCHHHHhccCC--------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 688 GYCDEEGEQMLVYEFVPNGTLRDWLSGRT--------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 688 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
+++...+..++||||+++|+|.+++.... ...+++..+++++.|++.||+|||+++ |+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence 99999999999999999999999997532 134789999999999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
+.++.+||+|||+++....... ........||+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGC-----EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred cCCCeEEECcCccccccccccc-----cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 9999999999999975432111 111223356889999999999999999999999999999999 8899875433
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
. ....... .......+..++..+.+++.+||+.||.+||++.|++++|++++.
T Consensus 247 ~-~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 E-QVLRFVM---------EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp H-HHHHHHH---------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred H-HHHHHHH---------cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 2 1111111 112223455677889999999999999999999999999988764
No 116
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.5e-39 Score=364.29 Aligned_cols=250 Identities=21% Similarity=0.305 Sum_probs=207.2
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 697 (958)
..++|...+.||+|+||+||+|+.+ +++.||||+++... ....+.+..|..+++.+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3457888899999999999999987 47899999987532 23356788999999988 7999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++|+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999997543 3899999999999999999999999 9999999999999999999999999997532
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 173 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~---------- 234 (353)
T 2i0e_A 173 WDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIM---------- 234 (353)
T ss_dssp CTT-------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH----------
T ss_pred cCC-------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-HHHHHHH----------
Confidence 111 1233467999999999999999999999999999999999999999754332 2221111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPS-----MSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 895 (958)
.....+|...+.++.+++.+||+.||++||+ +++++++
T Consensus 235 ~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 235 EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred hCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1122345567788999999999999999995 5777654
No 117
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.6e-40 Score=361.45 Aligned_cols=270 Identities=27% Similarity=0.454 Sum_probs=207.8
Q ss_pred HHHHHHHcCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEE
Q 002158 618 KELAMATAYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCD 691 (958)
Q Consensus 618 ~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 691 (958)
+++....++|...+.||+|+||.||+|.+. .+..||||++... .....+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 334445667888899999999999999864 2458999998754 3344567999999999999999999999997
Q ss_pred eCC-----eEEEEEEecCCCCHHHHhccC----CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC
Q 002158 692 EEG-----EQMLVYEFVPNGTLRDWLSGR----TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN 762 (958)
Q Consensus 692 ~~~-----~~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~ 762 (958)
..+ ..++||||+++|+|.+++... ....+++.+++.++.|+++||+|||+.+ |+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 755 359999999999999998532 2345999999999999999999999999 9999999999999999
Q ss_pred CCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHH
Q 002158 763 LNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVR 841 (958)
Q Consensus 763 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~ 841 (958)
+.+||+|||+++....... ........+++.|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 258 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDY-----YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258 (313)
T ss_dssp SCEEECSCSCC---------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred CcEEEeecCcceecccccc-----cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH
Confidence 9999999999976532211 112234457889999999999999999999999999999999 8889875443221
Q ss_pred HHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 842 EVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 842 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
... . ........+..++..+.+++.+||+.||.+||++.+++++|+++++..|.
T Consensus 259 ~~~-~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 259 YDY-L---------LHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp HHH-H---------HTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred HHH-H---------HcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 111 1 11112233556678899999999999999999999999999999988764
No 118
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4e-40 Score=390.28 Aligned_cols=261 Identities=31% Similarity=0.481 Sum_probs=215.9
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
...++|...+.||+|+||+||+|.++++..||||+++... ...++|.+|+++|++++|+||+++++++.. +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3456778889999999999999999888899999998644 345689999999999999999999999876 67899999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++|+|.++++......+++.+++.++.|+++||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 999999999997544445899999999999999999999999 9999999999999999999999999998653210
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........++..|+|||++....++.++|||||||++|||++ |+.||.+..... ....... ...
T Consensus 418 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~-~~~~i~~---------~~~ 482 (535)
T 2h8h_A 418 -----YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVER---------GYR 482 (535)
T ss_dssp -----HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH-HHHHHHT---------TCC
T ss_pred -----eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHc---------CCC
Confidence 111123457788999999999999999999999999999999 999997544321 1111111 111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
...+..++..+.++|.+||+.||++||+++++++.|+++....
T Consensus 483 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 483 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 2335567788999999999999999999999999999876443
No 119
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.1e-39 Score=350.29 Aligned_cols=247 Identities=22% Similarity=0.359 Sum_probs=206.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.++|...+.||+|+||+||+|.+. ++..||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 456888899999999999999986 5779999999876556677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe---cCCCCeEEeeeeeecccccC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL---DSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl---~~~~~~kl~DFGla~~~~~~ 779 (958)
+++++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999997643 3899999999999999999999999 9999999999999 78899999999999765321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
. ......||+.|+|||++.+. ++.++||||||+++|||++|+.||...............
T Consensus 163 ~--------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----------- 222 (277)
T 3f3z_A 163 K--------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREG----------- 222 (277)
T ss_dssp S--------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred c--------chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC-----------
Confidence 1 12234699999999998654 899999999999999999999999765433222111111
Q ss_pred CCCCCh----HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPS----ECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+. .++..+.+++.+||+.||++||++.|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 223 TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111122 346789999999999999999999999874
No 120
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.3e-39 Score=352.15 Aligned_cols=258 Identities=28% Similarity=0.467 Sum_probs=208.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.++|...+.||+|+||+||+|.+.+ +..||||.+... .....+.|.+|++++++++||||+++++++..+ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 3567788999999999999998643 346999998765 344567899999999999999999999998754 5689
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++++|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 90 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999997543 34899999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.. ........||+.|+|||++.+..++.++||||||+++|||++ |+.||.......... ... .
T Consensus 166 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~-~~~---------~ 229 (281)
T 3cc6_A 166 ED------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-VLE---------K 229 (281)
T ss_dssp -------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH-HHH---------H
T ss_pred cc------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH-HHh---------c
Confidence 11 111233457889999999999999999999999999999998 999997543322111 111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
......+..++..+.+++.+||+.||++||++.|++++|+++.+.
T Consensus 230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 230 GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 111223445678899999999999999999999999999988753
No 121
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.4e-39 Score=360.21 Aligned_cols=265 Identities=22% Similarity=0.324 Sum_probs=214.2
Q ss_pred cccChHHHHHHHcCCCCC-ceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHcc-CCCCcceEE
Q 002158 613 KGFKFKELAMATAYFSSS-TQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRL-HHRNLVSLL 687 (958)
Q Consensus 613 ~~~~~~el~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~ 687 (958)
..+.++..+...++|... +.||+|+||+||+|... +++.||||++... .......+.+|+.+++.+ +||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 445566666677777776 88999999999999986 6899999998753 233467899999999999 569999999
Q ss_pred EEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCC
Q 002158 688 GYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLN 764 (958)
Q Consensus 688 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~ 764 (958)
+++...+..++||||+++|+|.+++.......+++.++..++.|++.||+|||+++ |+||||||+|||++. ++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCc
Confidence 99999999999999999999999997665566999999999999999999999999 999999999999988 789
Q ss_pred eEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002158 765 AKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVN 844 (958)
Q Consensus 765 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~ 844 (958)
+||+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...........
T Consensus 173 ~kL~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~ 244 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC--------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN 244 (327)
T ss_dssp EEECCGGGCEEC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred EEEeeCccccccCCcc--------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH
Confidence 9999999998653211 12335699999999999999999999999999999999999999976544332222
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... .........++..+.+++.+||+.||++||+++|++++
T Consensus 245 i~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 245 ISQVNV-------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHTCC-------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHhccc-------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 111110 11112234566789999999999999999999999864
No 122
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.6e-39 Score=350.59 Aligned_cols=246 Identities=25% Similarity=0.358 Sum_probs=186.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 46888999999999999999975 68999999987643 233567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+ +++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 93 e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~- 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCc-
Confidence 999 778888886543 4899999999999999999999999 999999999999999999999999999754321
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||........ .... ...
T Consensus 166 -------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~----------~~~ 227 (275)
T 2eue_A 166 -------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-FKNI----------SNG 227 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH----------HHT
T ss_pred -------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH----------HhC
Confidence 11223469999999999988765 6899999999999999999999975443221 1111 111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+...+..+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 228 VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 223455567889999999999999999999999874
No 123
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=364.67 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=201.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCC--CCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHH--RNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lV~ 700 (958)
+.|...+.||+|+||+||+|...+++.||||++... .....+.+.+|++++++++| +||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 457788999999999999999988999999998754 33445679999999999976 99999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|+ .+++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 89 e~-~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 95 5889999998654 4899999999999999999999999 99999999999997 6789999999998653221
Q ss_pred CCCCccceeeeeccCCCCccChhhhcc-----------CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS 849 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~ 849 (958)
. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||................
T Consensus 162 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 236 (343)
T 3dbq_A 162 T-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 236 (343)
T ss_dssp -------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCT
T ss_pred c-----cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcC
Confidence 1 112234579999999999975 678889999999999999999999997644332222221111
Q ss_pred CcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002158 850 GMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELE 897 (958)
Q Consensus 850 ~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 897 (958)
......+...+..+.+++.+||+.||++|||+.|++++-.
T Consensus 237 --------~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 237 --------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp --------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred --------CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 1112334445678899999999999999999999998743
No 124
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.3e-39 Score=355.98 Aligned_cols=261 Identities=26% Similarity=0.391 Sum_probs=209.6
Q ss_pred HcCCCCCc-eeeeeCCeEEEEEEEC---CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 624 TAYFSSST-QVGQGGYGKVYKGILS---DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 624 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
..+|...+ .||+|+||+||+|.+. .++.||||++..... ...+++.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34566666 8999999999999653 468899999976432 2356799999999999999999999999 566889
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 94 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 9999999999999997653 3899999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
..... ........|++.|+|||++.+..++.++||||||+++|||++ |+.||........ .....
T Consensus 169 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~--------- 234 (291)
T 1xbb_A 169 ADENY----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLE--------- 234 (291)
T ss_dssp TTCSE----EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-HHHHH---------
T ss_pred cCCCc----ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-HHHHH---------
Confidence 32210 111223446788999999999889999999999999999999 9999976443221 11111
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
.......+..++..+.+++.+||+.||++||++.++++.|+++....+
T Consensus 235 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 235 KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 111223455677889999999999999999999999999999886543
No 125
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-39 Score=356.90 Aligned_cols=269 Identities=24% Similarity=0.361 Sum_probs=208.6
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHcc--CCCCcceEEEEEEe
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL--HHRNLVSLLGYCDE 692 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~ 692 (958)
.....-....++|...+.||+|+||.||+|.+. ++.||||++... ....+.+|.+++... +||||+++++++..
T Consensus 27 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp SCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred CCcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 333444455678999999999999999999985 899999998643 334556677766665 89999999999988
Q ss_pred C----CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc--------CCCCeeccCCCccceEec
Q 002158 693 E----GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE--------AHPPVFHRDIKASNILLD 760 (958)
Q Consensus 693 ~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~--------~~~~iiH~Dikp~NILl~ 760 (958)
. ...++||||+++|+|.++++.. .+++.+++.++.|++.||+|||+. + |+||||||+|||++
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~ 176 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVK 176 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEEC
T ss_pred CCCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEEC
Confidence 7 7899999999999999999754 389999999999999999999998 6 99999999999999
Q ss_pred CCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCc------chhhhHHHHHHHHHhC-----
Q 002158 761 SNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDK------SDVYSLGVVLLELLTG----- 829 (958)
Q Consensus 761 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~DV~S~Gv~l~elltG----- 829 (958)
.++.+||+|||+++......... ........||+.|+|||++.+.....+ +|||||||++|||++|
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~ 253 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEV---DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGG 253 (337)
T ss_dssp TTSCEEECCCTTCEECC------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred CCCCEEEEeCCCceeeccccccc---cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccc
Confidence 99999999999997653322111 111224569999999999988776665 9999999999999999
Q ss_pred -----CCCCCCCch---hHHHHHHHhhcCcchhhhcccCCCCC-----hHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 830 -----MQPISHGKN---IVREVNVARDSGMVFSIIDNRMGSYP-----SECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 830 -----~~P~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
+.||..... ........... .......+ ..++..+.+++.+||+.||++||+++|++++|
T Consensus 254 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 326 (337)
T 3mdy_A 254 IVEEYQLPYHDLVPSDPSYEDMREIVCI-------KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326 (337)
T ss_dssp BCCCCCCTTTTTSCSSCCHHHHHHHHTT-------SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred ccccccccHhhhcCCCCchhhhHHHHhh-------hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHH
Confidence 666643211 11111111100 01111222 37889999999999999999999999999999
Q ss_pred HHhHhhC
Q 002158 897 ENILKMF 903 (958)
Q Consensus 897 ~~~~~~~ 903 (958)
+++.+..
T Consensus 327 ~~l~~~~ 333 (337)
T 3mdy_A 327 AKMSESQ 333 (337)
T ss_dssp HHHHHTT
T ss_pred HHHHhhc
Confidence 9988654
No 126
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=388.45 Aligned_cols=254 Identities=27% Similarity=0.447 Sum_probs=206.6
Q ss_pred eeeeeCCeEEEEEEEC---CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 632 QVGQGGYGKVYKGILS---DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 632 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
.||+|+||+||+|.+. ++..||||+++... ....++|.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 46679999998653 3456789999999999999999999999976 56999999999999
Q ss_pred HHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccc
Q 002158 708 LRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPT 787 (958)
Q Consensus 708 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 787 (958)
|.+++... ...+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++........ .
T Consensus 422 L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~----~ 493 (613)
T 2ozo_A 422 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY----Y 493 (613)
T ss_dssp HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred HHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce----e
Confidence 99999754 345899999999999999999999999 999999999999999999999999999865322211 1
Q ss_pred eeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChH
Q 002158 788 HVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSE 866 (958)
Q Consensus 788 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 866 (958)
.......+++.|+|||++.+..++.++|||||||++|||++ |+.||........ ..... .......+..
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-~~~i~---------~~~~~~~p~~ 563 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIE---------QGKRMECPPE 563 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH-HHHHH---------TTCCCCCCTT
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-HHHHH---------cCCCCCCCCc
Confidence 11223346789999999999999999999999999999998 9999976543221 11111 1112344667
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 867 CVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 867 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
++..+.+++.+||+.||++||+++++++.|+.+.....
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999999999999876554
No 127
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=375.10 Aligned_cols=264 Identities=23% Similarity=0.252 Sum_probs=210.7
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEE
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYC 690 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~ 690 (958)
+.+++.....++|...+.||+|+||+||+|+.+ +++.||||++..... ...+.+.+|.+++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667788999999999999999999986 699999999975321 1223588999999999999999999999
Q ss_pred EeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeee
Q 002158 691 DEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADF 770 (958)
Q Consensus 691 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DF 770 (958)
.+.+..|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999997543 34899999999999999999999999 999999999999999999999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhc-------cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHH
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL-------THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREV 843 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~ 843 (958)
|+++...... ........||+.|+|||++. ...++.++|||||||++|||++|+.||..........
T Consensus 207 Gla~~~~~~~------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~ 280 (412)
T 2vd5_A 207 GSCLKLRADG------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280 (412)
T ss_dssp TTCEECCTTS------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred hhheeccCCC------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9998653211 11223467999999999997 3568999999999999999999999997654322211
Q ss_pred HHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCC---CCHHHHHHH
Q 002158 844 NVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHR---PSMSDVVRE 895 (958)
Q Consensus 844 ~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 895 (958)
...... .....+..+..++.++.+++.+||. +|.+| |+++|++++
T Consensus 281 ~i~~~~------~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 281 KIVHYK------EHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHTHH------HHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHhcc------cCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 111100 0001111223466789999999999 99998 689999875
No 128
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=8.5e-40 Score=354.98 Aligned_cols=252 Identities=29% Similarity=0.445 Sum_probs=203.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC-CeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE-GEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lV~E~~ 703 (958)
++|...+.||+|+||+||+|.+ .|+.||||+++... ..+.+.+|++++++++||||+++++++... +..++||||+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 4677888999999999999988 58899999997643 456799999999999999999999997554 4789999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCC
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++++|.+++.......+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 170 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 170 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc----
Confidence 9999999997654444788999999999999999999999 999999999999999999999999998754211
Q ss_pred CccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ...... ......
T Consensus 171 ------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~---------~~~~~~ 234 (278)
T 1byg_A 171 ------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPRVE---------KGYKMD 234 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-HHHHHT---------TTCCCC
T ss_pred ------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHh---------cCCCCC
Confidence 122357889999999999999999999999999999998 999997543211 111111 111223
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
.+..++..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 235 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 4556678899999999999999999999999999998653
No 129
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-39 Score=362.37 Aligned_cols=263 Identities=25% Similarity=0.305 Sum_probs=206.3
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-----ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-----SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE 693 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 693 (958)
+....++|...+.||+|+||+||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3445678999999999999999999985 6889999998643 234456799999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccC--------------------------------------CCCCchHHHHHHHHHHHHHH
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGR--------------------------------------TKENLNFAMRLRVALDSAKG 735 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia~a 735 (958)
+..++||||+++|+|.+++... ....+++..+..++.|+++|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999999521 01235788889999999999
Q ss_pred HHHhhhcCCCCeeccCCCccceEecCCC--CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc--CCCC
Q 002158 736 ILYLHTEAHPPVFHRDIKASNILLDSNL--NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT--HKLT 811 (958)
Q Consensus 736 L~yLH~~~~~~iiH~Dikp~NILl~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~ 811 (958)
|+|||+.+ |+||||||+||+++.++ .+||+|||+++......... ........||+.|+|||++.+ ..++
T Consensus 181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~ 254 (345)
T 3hko_A 181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE---YYGMTTKAGTPYFVAPEVLNTTNESYG 254 (345)
T ss_dssp HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-----------CCCGGGCCHHHHTCSSSCCC
T ss_pred HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccc---cccccccCCCccccCchhhccCCCCCC
Confidence 99999999 99999999999998776 89999999998654322211 112234569999999999975 6788
Q ss_pred CcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHH
Q 002158 812 DKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSD 891 (958)
Q Consensus 812 ~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 891 (958)
.++||||||+++|||++|+.||............... ..... .......+..+.+++.+||+.||++||++.|
T Consensus 255 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 327 (345)
T 3hko_A 255 PKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK-KLCFE------NPNYNVLSPLARDLLSNLLNRNVDERFDAMR 327 (345)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCTT------SGGGGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhc-ccccC------CcccccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 9999999999999999999999765543322222111 11100 0011235678999999999999999999999
Q ss_pred HHHH
Q 002158 892 VVRE 895 (958)
Q Consensus 892 vl~~ 895 (958)
++++
T Consensus 328 ~l~h 331 (345)
T 3hko_A 328 ALQH 331 (345)
T ss_dssp HHHS
T ss_pred HhcC
Confidence 9975
No 130
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=354.12 Aligned_cols=266 Identities=27% Similarity=0.390 Sum_probs=212.1
Q ss_pred CCCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE-EEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ-MLV 699 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lV 699 (958)
.|...+.||+|+||+||+|.+.+ +..||+|++.... ....+.|.+|++++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 34456789999999999998642 2379999987643 34457899999999999999999999999776655 999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+.+|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999999997643 45899999999999999999999999 999999999999999999999999999754321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.. ..........||+.|+|||.+.+..++.++||||||+++|||++|..|+............... ..
T Consensus 178 ~~---~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~---------~~ 245 (298)
T 3pls_A 178 EY---YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ---------GR 245 (298)
T ss_dssp GG---GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT---------TC
T ss_pred cc---cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc---------CC
Confidence 11 1112223456888999999999999999999999999999999966665433322222111111 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCCC
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPETD 907 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 907 (958)
....+..++..+.+++.+||+.||.+|||++++++.|+++++.+....
T Consensus 246 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 122345567889999999999999999999999999999998876543
No 131
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9.7e-40 Score=366.18 Aligned_cols=269 Identities=16% Similarity=0.180 Sum_probs=202.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC----CCcEEEEEEeccCChh-----------cHHHHHHHHHHHHccCCCCcceEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS----DNTTVAIKRAEEGSLQ-----------GQNEFLTEIKLLSRLHHRNLVSLLGY 689 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~ 689 (958)
++|...+.||+|+||+||+|.+. .+..||||++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56778899999999999999986 5788999998764321 11246788999999999999999999
Q ss_pred EEe----CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC--
Q 002158 690 CDE----EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-- 763 (958)
Q Consensus 690 ~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-- 763 (958)
+.. ....++||||+ +++|.+++.... .+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCC
Confidence 987 67899999999 999999997654 5999999999999999999999999 99999999999999887
Q ss_pred CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHH
Q 002158 764 NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREV 843 (958)
Q Consensus 764 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~ 843 (958)
.+||+|||+++.+..................||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 99999999998764333222211222245679999999999999999999999999999999999999995422111111
Q ss_pred HHHhh--cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 844 NVARD--SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 844 ~~~~~--~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
..... .......+..... ...++.++.+++.+||+.||++||+++++++.|+++..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHhhcccccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11000 0000000000000 11455789999999999999999999999999987543
No 132
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3e-39 Score=350.84 Aligned_cols=247 Identities=28% Similarity=0.405 Sum_probs=204.9
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
.++|...+.||+|+||+||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 356788899999999999999986 57799999986532 22345788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~- 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence 99999999999997543 3899999999999999999999999 99999999999999999999999999864321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ..... ..
T Consensus 162 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~----------~~ 222 (279)
T 3fdn_A 162 --------SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS----------RV 222 (279)
T ss_dssp --------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHH----------HT
T ss_pred --------ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-HHHHH----------hC
Confidence 112345689999999999999999999999999999999999999975443221 11111 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+...+..+.+++.+||+.||++||+++|++++
T Consensus 223 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 223 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 123345567889999999999999999999999986
No 133
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5e-39 Score=356.67 Aligned_cols=248 Identities=22% Similarity=0.325 Sum_probs=206.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh------cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ------GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
.++|...+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|++++++++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456888899999999999999986 6899999998764321 356799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC----CeEEeeeee
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL----NAKVADFGL 772 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~----~~kl~DFGl 772 (958)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999754 34999999999999999999999999 99999999999999888 799999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......... .....
T Consensus 166 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~i~~~--- 233 (321)
T 2a2a_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA-NITSV--- 233 (321)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH-HHHTT---
T ss_pred ceecCccc--------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHHhc---
Confidence 98653211 1123469999999999999999999999999999999999999997544322211 11110
Q ss_pred hhhhcccCCCCC----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 FSIIDNRMGSYP----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~~~i~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+ ...+..+.+++.+||+.||++||+++|++++
T Consensus 234 -------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 234 -------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -------CCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -------ccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01111 2345678999999999999999999999974
No 134
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.6e-39 Score=364.17 Aligned_cols=247 Identities=26% Similarity=0.426 Sum_probs=203.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
..|...+.||+|+||+||+|... +++.||||++.... ....+++.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45777889999999999999974 78999999987542 223457899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||++ |+|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 9996 68888886433 34899999999999999999999999 99999999999999999999999999975421
Q ss_pred CCCCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||............... .
T Consensus 207 ---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~-~------- 269 (348)
T 1u5q_A 207 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-E------- 269 (348)
T ss_dssp ---------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-C-------
T ss_pred ---------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-C-------
Confidence 12346999999999985 567899999999999999999999999765543322221111 0
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.....+..++..+.+++.+||+.||++||++++++++.
T Consensus 270 -~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 270 -SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred -CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 01112334567889999999999999999999998753
No 135
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.2e-39 Score=360.89 Aligned_cols=266 Identities=23% Similarity=0.328 Sum_probs=199.3
Q ss_pred cCCCC-CceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSS-STQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E 701 (958)
+.|.+ .+.||+|+||+||+|.+. +++.||||++........+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 35555 367999999999999965 7899999999876555677899999999995 79999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC---eEEeeeeeeccccc
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN---AKVADFGLSRLAPV 778 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~---~kl~DFGla~~~~~ 778 (958)
|+++|+|.+++.... .+++.++..++.|+++||+|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999997643 4899999999999999999999999 999999999999998776 99999999876533
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhcc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhH---HHHHH-Hhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIV---REVNV-ARDS 849 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~---~~~~~-~~~~ 849 (958)
................||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ..... ....
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 22211111122234569999999999975 568899999999999999999999997532110 00000 0000
Q ss_pred CcchhhhcccCCCCCh----HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 850 GMVFSIIDNRMGSYPS----ECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 850 ~~~~~~i~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+.+.......+. .++..+.+++.+||+.||++||+++|++++
T Consensus 247 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0001111111112222 245789999999999999999999999974
No 136
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1e-39 Score=383.86 Aligned_cols=252 Identities=25% Similarity=0.356 Sum_probs=211.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
.++|...+.||+|+||.||+|..+ +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999986 69999999986532 22345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999998766556999999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh--HHHHHHHhhcCcchhhhc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI--VREVNVARDSGMVFSIID 857 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~--~~~~~~~~~~~~~~~~i~ 857 (958)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+. ..+.
T Consensus 340 --------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~---------~~i~ 402 (576)
T 2acx_A 340 --------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE---------RLVK 402 (576)
T ss_dssp --------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHH---------HHHH
T ss_pred --------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHH---------HHhh
Confidence 1123457999999999999999999999999999999999999999754311 11111 1111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
.....++...+..+.+++.+||+.||.+|| +++|++++
T Consensus 403 ~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 403 EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred cccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 122234556678899999999999999999 78888865
No 137
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.8e-39 Score=355.61 Aligned_cols=262 Identities=21% Similarity=0.250 Sum_probs=203.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
-++|...+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 357888899999999999999986 688999999876432 2346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999997543 4899999999999999999999999 999999999999999999999999998764321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
. ........||+.|+|||++.+..++.++||||||+++|||++|+.||...... ........... .
T Consensus 188 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~-------~ 253 (309)
T 2h34_A 188 K------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-VMGAHINQAIP-------R 253 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-HHHHHHHSCCC-------C
T ss_pred c------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-HHHHHhccCCC-------C
Confidence 1 11123456899999999999999999999999999999999999999764432 11111111100 0
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhHhhCC
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRP-SMSDVVRELENILKMFP 904 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~ 904 (958)
....+..++..+.+++.+||+.||++|| +++++++.|++.++...
T Consensus 254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 1122345667899999999999999999 99999999998765443
No 138
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=362.74 Aligned_cols=258 Identities=26% Similarity=0.433 Sum_probs=204.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCc----EEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNT----TVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
.+|...+.||+|+||+||+|.+. +++ .||+|.+... .....+++.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 46778899999999999999975 444 3577777543 3445678999999999999999999999998764 889
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999997653 34899999999999999999999999 99999999999999999999999999986533
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ........||+.|+|||++.+..++.++||||||+++|||++ |+.||......... .... .
T Consensus 170 ~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-~~~~---------~ 234 (327)
T 3lzb_A 170 EEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILE---------K 234 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HHHH---------T
T ss_pred ccc-----cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH-HHHH---------c
Confidence 221 112223457889999999999999999999999999999999 99999754332111 1111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
......+..++..+.+++.+||+.||.+||++.|+++.|+++.+.
T Consensus 235 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 235 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111233555678899999999999999999999999999998743
No 139
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.3e-39 Score=349.15 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=206.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.++|...+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 357888899999999999999986 6899999998653 3344567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC---eEEeeeeeecccc
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN---AKVADFGLSRLAP 777 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~---~kl~DFGla~~~~ 777 (958)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999987543 4899999999999999999999999 999999999999987655 9999999997653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..................
T Consensus 160 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~------ 225 (284)
T 3kk8_A 160 DSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD------ 225 (284)
T ss_dssp SSC--------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC------
T ss_pred cCc--------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc------
Confidence 211 122356999999999999999999999999999999999999999765433222111111000
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........++..+.+++.+||+.||++||+++|++++
T Consensus 226 -~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 -YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0011123456789999999999999999999999975
No 140
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.5e-39 Score=377.55 Aligned_cols=248 Identities=22% Similarity=0.277 Sum_probs=198.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||.||+|... +++.||||++... .......+.+|+++++.++||||+++++++...+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 46888899999999999999976 6899999998753 2233456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 228 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 228 EYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred eeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999997543 48999999999999999999998 78 999999999999999999999999999753221
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... ..
T Consensus 303 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~----------~~ 364 (446)
T 4ejn_A 303 -------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-FELIL----------ME 364 (446)
T ss_dssp -----------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHH----------HC
T ss_pred -------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-HHHHH----------hC
Confidence 1122346799999999999999999999999999999999999999975443221 11111 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
...+|...+..+.+++.+||+.||++|| +++|++++
T Consensus 365 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 365 EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 1234555678899999999999999999 99999874
No 141
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=358.83 Aligned_cols=246 Identities=22% Similarity=0.327 Sum_probs=197.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 699 (958)
.++|+..+.||+|+||+||+|.+. +++.||||++.... .....++..|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357888999999999999999987 79999999986542 33344566677666666 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+ +++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 779999987643 35999999999999999999999999 999999999999999999999999998765321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......||++|+|||++.+ .++.++|||||||++|||++|..|+........ ... +...
T Consensus 211 --------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~----~~~-~~~~------ 270 (311)
T 3p1a_A 211 --------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ----LRQ-GYLP------ 270 (311)
T ss_dssp ------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH----HTT-TCCC------
T ss_pred --------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH----Hhc-cCCC------
Confidence 12234569999999999875 789999999999999999999777654322111 111 1000
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+..++..+.+++.+||+.||++||+++|++++
T Consensus 271 -~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 271 -PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 01122345789999999999999999999999863
No 142
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.9e-38 Score=347.53 Aligned_cols=267 Identities=20% Similarity=0.279 Sum_probs=211.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEE-EeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYC-DEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|++. +++.||||++...... +++.+|+++++.++|+++++.+.++ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 56788899999999999999974 7999999998764332 3588999999999988877666665 567788999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe---cCCCCeEEeeeeeecccccC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL---DSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl---~~~~~~kl~DFGla~~~~~~ 779 (958)
+ +++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred c-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 9 999999997433 34999999999999999999999999 9999999999999 58899999999999876543
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch-----hHHHHHHHhhcCcchh
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN-----IVREVNVARDSGMVFS 854 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~-----~~~~~~~~~~~~~~~~ 854 (958)
......+........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 238 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP--- 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC---
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc---
Confidence 33222222223456799999999999999999999999999999999999999975321 1111110000000
Q ss_pred hhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002158 855 IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPET 906 (958)
Q Consensus 855 ~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 906 (958)
....+..++..+.+++.+||+.||++||+++++++.|+++.......
T Consensus 239 -----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 239 -----IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp -----HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred -----hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 00012345678999999999999999999999999999998766543
No 143
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-39 Score=354.62 Aligned_cols=252 Identities=30% Similarity=0.448 Sum_probs=208.0
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe---------
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--------- 692 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 692 (958)
...+|...+.||+|+||.||+|.+. +++.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456888899999999999999986 79999999997643 246789999999999999999999854
Q ss_pred -------CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 693 -------EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 693 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
....++||||+++++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCE
Confidence 445899999999999999998665556999999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNV 845 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~ 845 (958)
||+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|..|+........ .
T Consensus 162 kl~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~ 230 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT---D 230 (284)
T ss_dssp EECCCTTCEESSCCS--------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHH---H
T ss_pred EECcchhheeccccc--------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHH---H
Confidence 999999988653321 11234599999999999999999999999999999999999988742211111 1
Q ss_pred HhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 846 ARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 846 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
.. . ...+..++..+.+++.+||+.||++||++.|++++|+.+.+...
T Consensus 231 ~~---------~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 231 LR---------D---GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HH---------T---TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred hh---------c---ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 10 0 11233455678999999999999999999999999998765443
No 144
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.4e-39 Score=353.95 Aligned_cols=262 Identities=23% Similarity=0.352 Sum_probs=203.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+|...+.||+|+||.||+|... +++.||||++... ......++.+|++++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 36778899999999999999975 7899999998753 3344567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 701 EFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 701 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||+++++|.+++... ....+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 999999999999642 2345899999999999999999999999 99999999999999999999999999876532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh-HHHHHHHhhcCcchhhhc
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI-VREVNVARDSGMVFSIID 857 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~-~~~~~~~~~~~~~~~~i~ 857 (958)
.. .......|++.|+|||++.+..++.++||||||+++|||++|+.||...... ......... .
T Consensus 189 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~------- 253 (310)
T 2wqm_A 189 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-C------- 253 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT-T-------
T ss_pred CC-------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc-c-------
Confidence 11 1122356899999999999999999999999999999999999999754321 111111111 1
Q ss_pred ccCCC-CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 858 NRMGS-YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 858 ~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
.... .+..++..+.+++.+||+.||++||+++++++.|+++......
T Consensus 254 -~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 254 -DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp -CSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -cCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 1111 1234567899999999999999999999999999998865543
No 145
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-39 Score=364.76 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=195.5
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.++|...+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 346888899999999999999987 789999999976433 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC--eEEeeeeeecccccCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN--AKVADFGLSRLAPVLD 780 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~--~kl~DFGla~~~~~~~ 780 (958)
+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~-- 170 (361)
T 3uc3_A 98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-- 170 (361)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc--
Confidence 99999999997543 4899999999999999999999999 999999999999987765 99999999874321
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCc-chhhhHHHHHHHHHhCCCCCCCCchh---HHHHHHHhhcCcchhhh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVLLELLTGMQPISHGKNI---VREVNVARDSGMVFSII 856 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DV~S~Gv~l~elltG~~P~~~~~~~---~~~~~~~~~~~~~~~~i 856 (958)
........||+.|+|||++.+..++.+ +||||+||++|||++|+.||...... ............
T Consensus 171 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~----- 239 (361)
T 3uc3_A 171 ------HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY----- 239 (361)
T ss_dssp ----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC-----
T ss_pred ------cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-----
Confidence 111234569999999999988887765 89999999999999999999753321 111111111000
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. .......+..+.+++.+||+.||++|||+.|++++
T Consensus 240 --~-~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 240 --S-IPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp --C-CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred --C-CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 00111345788999999999999999999999986
No 146
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-38 Score=348.56 Aligned_cols=271 Identities=19% Similarity=0.276 Sum_probs=208.8
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEE-EeCCeEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYC-DEEGEQMLVY 700 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lV~ 700 (958)
..++|...+.||+|+||+||+|++. +++.||||++...... .++.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 3467899999999999999999974 7899999987654322 3578999999999988877776665 6677889999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe---cCCCCeEEeeeeeecccc
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL---DSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl---~~~~~~kl~DFGla~~~~ 777 (958)
||+ +++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 999999997543 34999999999999999999999999 9999999999999 789999999999998765
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh--HHHHHHHhhcCcchhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI--VREVNVARDSGMVFSI 855 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~--~~~~~~~~~~~~~~~~ 855 (958)
........+........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----- 234 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK----- 234 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH-----
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc-----
Confidence 44332222222334567999999999999999999999999999999999999999753211 00000000000
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
...........++..+.+++.+||+.||++||+++++++.|+++......
T Consensus 235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred ccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 00000001123467899999999999999999999999999999876543
No 147
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.3e-39 Score=357.43 Aligned_cols=259 Identities=31% Similarity=0.483 Sum_probs=210.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcE--EEEEEeccC-ChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTT--VAIKRAEEG-SLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV 699 (958)
++|...+.||+|+||.||+|.+. ++.. ||||.+... .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 46778899999999999999975 5654 499988753 233445789999999999 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCC--------------CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 700 YEFVPNGTLRDWLSGRT--------------KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
|||+++|+|.+++.... ...+++.+++.++.|+++||+|||+++ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997643 245899999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~ 844 (958)
||+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 182 kL~Dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-LYE 252 (327)
T ss_dssp EECCTTCEESSCEE--------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHH
T ss_pred EEcccCcCcccccc--------ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH-HHH
Confidence 99999998743211 11223457889999999999889999999999999999998 999997544321 111
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
... .......+..++..+.+++.+||+.||++||+++|++++|+++++...
T Consensus 253 ~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 253 KLP---------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp HGG---------GTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred Hhh---------cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111 111123345667889999999999999999999999999999887543
No 148
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=360.58 Aligned_cols=268 Identities=26% Similarity=0.451 Sum_probs=213.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-----CCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC--eEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-----SDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG--EQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~ 697 (958)
.+|...+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4567788999999999999984 368899999998776666778999999999999999999999987654 789
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++++|.+++.... ..+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 121 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999997653 34899999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC-------
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG------- 850 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~------- 850 (958)
..... ........++..|+|||++.+..++.++||||||+++|||++|..|+...... .........
T Consensus 197 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 197 QDKEY----YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE--FMRMIGNDKQGQMIVF 270 (326)
T ss_dssp SSCSE----EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH--HHHHHCTTCCTHHHHH
T ss_pred ccccc----cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH--HHHhhccccchhhhHH
Confidence 32210 11122345778899999999988999999999999999999999998532111 111000000
Q ss_pred cchhhhc-ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 851 MVFSIID-NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 851 ~~~~~i~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
...+.+. ......+..++..+.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0011111 112234566788999999999999999999999999999998764
No 149
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-39 Score=375.99 Aligned_cols=247 Identities=25% Similarity=0.381 Sum_probs=206.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+|...+.||+|+||.||+|.+. +|+.||||++..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 35777889999999999999986 799999999865321 23457899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~- 169 (476)
T 2y94_A 96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG- 169 (476)
T ss_dssp ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT-
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc-
Confidence 999999999999754 34999999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+.... ....... ..
T Consensus 170 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~----------~~ 231 (476)
T 2y94_A 170 -------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-TLFKKIC----------DG 231 (476)
T ss_dssp -------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-HHHHHHH----------TT
T ss_pred -------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-HHHHHHh----------cC
Confidence 11234569999999999988776 67999999999999999999999754322 2211111 11
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....|...+..+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 232 IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 122344556789999999999999999999999975
No 150
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.6e-39 Score=367.22 Aligned_cols=252 Identities=23% Similarity=0.347 Sum_probs=201.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccC--CCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLH--HRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lV~ 700 (958)
..|...+.||+|+||+||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 358888999999999999999888999999998654 3344577999999999996 599999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
| +.+++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 55889999997654 4888999999999999999999999 99999999999995 5899999999998653221
Q ss_pred CCCCccceeeeeccCCCCccChhhhcc-----------CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDS 849 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~ 849 (958)
. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||................
T Consensus 209 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~ 283 (390)
T 2zmd_A 209 T-----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283 (390)
T ss_dssp ----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCT
T ss_pred c-----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCc
Confidence 1 111234569999999999975 368889999999999999999999997543322222221111
Q ss_pred CcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 850 GMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 850 ~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
. .....+...+..+.+++.+||+.||++||++.|++++-
T Consensus 284 ~--------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 284 N--------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp T--------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred c--------ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 1 01122333467889999999999999999999999763
No 151
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.7e-39 Score=391.89 Aligned_cols=361 Identities=19% Similarity=0.250 Sum_probs=280.8
Q ss_pred CCHhHHHHHHHHHHHcccCcc--------ccCCCCCCCCCCCCC---CceeeCccccCCCceeeEEEEccCCcCCCCccc
Q 002158 36 TDPQEASALRAIKNSLVDSMN--------HLRNWNKGDPCMSNW---TGVLCFDTVETDGHLHVRELQLLSMNLSGNLAP 104 (958)
Q Consensus 36 ~~~~~~~al~~~k~~~~~~~~--------~l~~W~~~~~c~~~w---~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~ 104 (958)
....|+.||.++++++.++.. ...+|+...+| |.| .||+|.+. .+|+.|+|.++++.|.+|+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~-c~w~~~~GV~C~~~------~~V~~L~L~~~~l~g~lp~ 99 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKEL-DMWGAQPGVSLNSN------GRVTGLSLEGFGASGRVPD 99 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCG-GGTTCCTTEEECTT------CCEEEEECTTSCCEEEECG
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCc-ccccCCCCeEEcCC------CCEEEEEecCcccCCcCCh
Confidence 345799999999999875522 23479876555 489 99999542 5899999999999999999
Q ss_pred cccCCCCcceeeccCcc---------------------------------------------------------------
Q 002158 105 ELGQLSRLQYYFMWNDL--------------------------------------------------------------- 121 (958)
Q Consensus 105 ~l~~L~~L~~L~l~n~~--------------------------------------------------------------- 121 (958)
+|++|++|++|++++|.
T Consensus 100 ~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 179 (636)
T 4eco_A 100 AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSS 179 (636)
T ss_dssp GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCC
T ss_pred HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccc
Confidence 99999999999997552
Q ss_pred ----------------cCCCCccccCCCCCcEEEeeCCCCCCC-----------------CChhhc--CCCCCCEEeccc
Q 002158 122 ----------------TGTIPKEIGNISSLIFLLLNGNKLSGS-----------------LPDELG--YLSNLNRLQVDE 166 (958)
Q Consensus 122 ----------------~~~ip~~i~~l~~L~~L~Ls~n~l~~~-----------------~p~~l~--~l~~L~~L~L~~ 166 (958)
.+ +|..|+++++|++|+|++|.++|. +|..++ ++++|++|+|++
T Consensus 180 ~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~ 258 (636)
T 4eco_A 180 RITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYN 258 (636)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEEC
T ss_pred ccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecC
Confidence 23 889999999999999999999985 999999 999999999999
Q ss_pred ccccccCccccccccccceEeccccc-ccc-cCchhhcCC------ccchhhhccCCccccCCCc--ccCCCCCccEEEc
Q 002158 167 NNITGTIPKSFANLSRVRHLHLNNNS-IGG-QIPSELSKL------STLIHLLVDNNNLSGNLPP--ELSELPQLCILQL 236 (958)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~~~~~~--~l~~l~~L~~L~L 236 (958)
|++.+.+|..|.++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .+..+++|++|+|
T Consensus 259 n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L 337 (636)
T 4eco_A 259 CPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLEC 337 (636)
T ss_dssp CTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEEC
T ss_pred CcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeC
Confidence 99999999999999999999999998 998 889888876 89999999999999 7888 8999999999999
Q ss_pred cCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCC-cCEEeccCCcCCCcCCCCCC-C--CCcCEEEccCCcC
Q 002158 237 DNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPN-LYYLDLSWNHLTGSIPSKKL-S--ENVTTIDLSDNYL 312 (958)
Q Consensus 237 ~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~-~--~~L~~L~Ls~N~l 312 (958)
++|+++ +.+| .+.++++|+.|+|++|+++..+..+..+++ |++|+|++|.++ .+|.... . ++|+.|+|++|.+
T Consensus 338 ~~N~l~-g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l 414 (636)
T 4eco_A 338 LYNQLE-GKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEI 414 (636)
T ss_dssp CSCCCE-EECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCT
T ss_pred cCCcCc-cchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcC
Confidence 999997 3567 788888888888888888866666788888 888888888887 5554422 2 3688888888888
Q ss_pred CCccchhcc-------CCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCC-------C
Q 002158 313 NGSILESIS-------NLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLP-------N 376 (958)
Q Consensus 313 ~~~~~~~~~-------~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~-------~ 376 (958)
++..|..|. .+++|++|+|++|+++ .+|..++.. .+.|+.|+|++|+++.++... ... +
T Consensus 415 ~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~----l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~ 489 (636)
T 4eco_A 415 GSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFST----GSPLSSINLMGNMLTEIPKNSLKDENENFKNTYL 489 (636)
T ss_dssp TTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHT----TCCCSEEECCSSCCSBCCSSSSEETTEECTTGGG
T ss_pred CCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHcc----CCCCCEEECCCCCCCCcCHHHhccccccccccCC
Confidence 887777777 6777888888888887 666665541 234557777777777666544 221 6
Q ss_pred cceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCC
Q 002158 377 NVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVN 416 (958)
Q Consensus 377 L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~ 416 (958)
|+.|+|++|.+.. ++...........+.+.|.+|.+.
T Consensus 490 L~~L~Ls~N~l~~---lp~~~~~~~l~~L~~L~Ls~N~l~ 526 (636)
T 4eco_A 490 LTSIDLRFNKLTK---LSDDFRATTLPYLVGIDLSYNSFS 526 (636)
T ss_dssp CCEEECCSSCCCB---CCGGGSTTTCTTCCEEECCSSCCS
T ss_pred ccEEECcCCcCCc---cChhhhhccCCCcCEEECCCCCCC
Confidence 7777777777652 111100013344455666666543
No 152
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.2e-39 Score=387.10 Aligned_cols=252 Identities=27% Similarity=0.406 Sum_probs=204.7
Q ss_pred ceeeeeCCeEEEEEEEC---CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 631 TQVGQGGYGKVYKGILS---DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
+.||+|+||+||+|.+. .++.||||+++... ....++|.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999763 46789999997642 3346789999999999999999999999975 468899999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
|+|.++++... .+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~--- 525 (635)
T 4fl3_A 454 GPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--- 525 (635)
T ss_dssp EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc---
Confidence 99999997543 4899999999999999999999999 999999999999999999999999999876432211
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYP 864 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 864 (958)
........||+.|+|||++.+..++.++|||||||++|||++ |+.||.+...... ..... .......+
T Consensus 526 -~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-~~~i~---------~~~~~~~p 594 (635)
T 4fl3_A 526 -YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLE---------KGERMGCP 594 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-HHHHH---------TTCCCCCC
T ss_pred -cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHH---------cCCCCCCC
Confidence 112233457889999999999999999999999999999999 9999976543221 11111 11123346
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
..++.++.+++.+||+.||++||+++++++.|+++...
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999999988754
No 153
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.4e-39 Score=367.57 Aligned_cols=249 Identities=22% Similarity=0.307 Sum_probs=192.2
Q ss_pred CCCCC-ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHc-cCCCCcceEEEEEEe----CCeEEE
Q 002158 626 YFSSS-TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSR-LHHRNLVSLLGYCDE----EGEQML 698 (958)
Q Consensus 626 ~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~----~~~~~l 698 (958)
+|... +.||+|+||+||+|.+. +++.||||++... ..+.+|++++.+ .+||||+++++++.. .+..++
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 34443 68999999999999986 6899999999642 356788888754 589999999999875 567899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEeeeeeecc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVADFGLSRL 775 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~DFGla~~ 775 (958)
||||+++|+|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 999999999999998765556999999999999999999999999 999999999999998 78999999999985
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhH---HHHHHHhhcCcc
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIV---REVNVARDSGMV 852 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~---~~~~~~~~~~~~ 852 (958)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ............
T Consensus 214 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~ 285 (400)
T 1nxk_A 214 TTSH--------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 285 (400)
T ss_dssp CC-------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC
T ss_pred cCCC--------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc
Confidence 4321 11234568999999999999999999999999999999999999997543211 000000000000
Q ss_pred hhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 853 FSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 853 ~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
. .......++.++.+++.+||+.||++|||++|++++-
T Consensus 286 ~------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 286 F------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp C------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred C------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0 0011134567899999999999999999999999863
No 154
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=353.97 Aligned_cols=259 Identities=23% Similarity=0.334 Sum_probs=201.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|...+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 46788899999999999999986 589999999865432 234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp CCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 999999999986543 4899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc--------
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV-------- 852 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~-------- 852 (958)
.......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||................+..
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 157 ------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp ---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred ------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccc
Confidence 11234468999999999976 568999999999999999999999997655433322211111100
Q ss_pred -----hhhhc-ccCCCC------ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 -----FSIID-NRMGSY------PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 -----~~~i~-~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..... +..... ....+..+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 000000 02355678999999999999999999999974
No 155
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.9e-39 Score=364.68 Aligned_cols=247 Identities=22% Similarity=0.289 Sum_probs=195.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHH-HHccCCCCcceEEEEEEeCCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKL-LSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
++|...+.||+|+||+||+|+.+ +++.||||++.... ......+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 46788899999999999999987 58899999987542 2233456777776 5778999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 118 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999997543 4889999999999999999999999 999999999999999999999999999853221
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... .
T Consensus 193 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~----------~ 254 (373)
T 2r5t_A 193 N-------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILN----------K 254 (373)
T ss_dssp C-------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HHHHHHH----------S
T ss_pred C-------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHh----------c
Confidence 1 12334679999999999999999999999999999999999999997544322 2211111 1
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
...++...+..+.+++.+||+.||.+||++.+.++
T Consensus 255 ~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 255 PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 12234456778999999999999999999864433
No 156
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6e-39 Score=349.70 Aligned_cols=251 Identities=24% Similarity=0.340 Sum_probs=199.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46788899999999999999986 68999999987542 33467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe---cCCCCeEEeeeeeecccc
Q 002158 703 VPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL---DSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 703 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl---~~~~~~kl~DFGla~~~~ 777 (958)
+++|+|.+++... ....+++..+..++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999998643 2345899999999999999999999999 9999999999999 456789999999997653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
.. .......||+.|+|||++. ..++.++||||||+++|||++|+.||............... .
T Consensus 179 ~~--------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~-~------- 241 (285)
T 3is5_A 179 SD--------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK-E------- 241 (285)
T ss_dssp ----------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-C-------
T ss_pred Cc--------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC-C-------
Confidence 21 1123456999999999985 56889999999999999999999999754432211111111 0
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..........++.+.+++.+||+.||++||+++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 242 PNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001111245778899999999999999999999863
No 157
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=357.89 Aligned_cols=273 Identities=23% Similarity=0.380 Sum_probs=201.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHH--HHccCCCCcceEEEEEEe-----CCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKL--LSRLHHRNLVSLLGYCDE-----EGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~-----~~~~~ 697 (958)
++|...+.||+|+||+||+|++ +++.||||++... ....+..|.++ +..++||||+++++++.. ....+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 4677888999999999999987 6899999999753 23445555555 445899999999986643 23578
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc---------CCCCeeccCCCccceEecCCCCeEEe
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE---------AHPPVFHRDIKASNILLDSNLNAKVA 768 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~---------~~~~iiH~Dikp~NILl~~~~~~kl~ 768 (958)
+||||+++|+|.+++.... .++..+.+++.|+++||+|||+. + |+||||||+|||++.++.+||+
T Consensus 89 lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEEC
T ss_pred EEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEe
Confidence 9999999999999997554 58899999999999999999998 7 9999999999999999999999
Q ss_pred eeeeecccccCCCCCC-ccceeeeeccCCCCccChhhhcc-------CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhH
Q 002158 769 DFGLSRLAPVLDDEGT-MPTHVSTIVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIV 840 (958)
Q Consensus 769 DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~ 840 (958)
|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++|||++|..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999986543221100 11122234569999999999986 456679999999999999999988775432210
Q ss_pred ----------------HHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 841 ----------------REVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 841 ----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
...............+.. .......++..+.+++.+||+.||++|||++|+++.|++++....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE-AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT-TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCc-ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 000000000000000000 001123577889999999999999999999999999999998776
Q ss_pred CCCc
Q 002158 905 ETDT 908 (958)
Q Consensus 905 ~~~~ 908 (958)
....
T Consensus 322 ~~~~ 325 (336)
T 3g2f_A 322 RNKS 325 (336)
T ss_dssp C---
T ss_pred hccc
Confidence 6543
No 158
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.2e-39 Score=373.02 Aligned_cols=255 Identities=23% Similarity=0.295 Sum_probs=198.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------Ce
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------GE 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~ 695 (958)
++|...+.||+|+||+||+|.+. +++.||||++... .....+++.+|+.+++.++||||+++++++... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 56888899999999999999976 6899999999754 334456789999999999999999999999654 35
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||||+++ +|.+.+.. .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 142 ~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 7999999965 57777743 2889999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc---
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV--- 852 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~--- 852 (958)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..............+..
T Consensus 214 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~ 285 (464)
T 3ttj_A 214 AGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285 (464)
T ss_dssp ---C--------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred cCCC--------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 5321 12234679999999999999999999999999999999999999998665443332222111110
Q ss_pred ---------hhhhcccC--CC-----------------CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 ---------FSIIDNRM--GS-----------------YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ---------~~~i~~~~--~~-----------------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+.... .. .....+.++.+++.+||+.||++|||++|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 00 001226678999999999999999999999976
No 159
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.4e-38 Score=346.48 Aligned_cols=248 Identities=22% Similarity=0.369 Sum_probs=208.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+|...+.||+|+||+||+|.+. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 46777889999999999999987 5889999998653 2344567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.... .+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 95 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp ECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999987543 4899999999999999999999999 9999999999999999999999999998653221
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......... .... ..
T Consensus 170 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~----------~~ 231 (294)
T 2rku_A 170 E-------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-RIKK----------NE 231 (294)
T ss_dssp C-------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HHHT----------TC
T ss_pred c-------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhh----------cc
Confidence 1 1233569999999999999999999999999999999999999997544322211 1111 11
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+...+..+.+++.+||+.||++||+++|++++
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 22344566789999999999999999999999975
No 160
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=353.14 Aligned_cols=269 Identities=23% Similarity=0.299 Sum_probs=209.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe----CCeEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE----EGEQML 698 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~l 698 (958)
.++|...+.||+|+||.||+|... +++.||||++........+.+.+|+++++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 356888899999999999999984 789999999977666677789999999999999999999999863 347899
Q ss_pred EEEecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 699 VYEFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
||||+++|+|.+++... ....+++.+++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999999752 2345899999999999999999999999 999999999999999999999999998754
Q ss_pred ccCCCCCC--ccceeeeeccCCCCccChhhhccCC---CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc
Q 002158 777 PVLDDEGT--MPTHVSTIVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM 851 (958)
Q Consensus 777 ~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~ 851 (958)
........ ..........||+.|+|||++.+.. ++.++||||||+++|||++|+.||..... ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---------~~~~ 255 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ---------KGDS 255 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH---------TTSC
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc---------ccch
Confidence 21110000 0000112345799999999987554 68899999999999999999999952110 0000
Q ss_pred chhhhccc-CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 852 VFSIIDNR-MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 852 ~~~~i~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
....+... ....+..++..+.+++.+||+.||.+||++++++++|+.+....|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 256 VALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp HHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred hhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 01111111 112234556789999999999999999999999999998764444
No 161
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6e-39 Score=347.74 Aligned_cols=254 Identities=24% Similarity=0.357 Sum_probs=206.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
.++|+..+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 356788899999999999999986 6899999998653 23345678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++... ..+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999999654 34899999999999999999999999 99999999999999999999999999976532211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
........||+.|+|||++.+..+ +.++||||||+++|||++|+.||...................
T Consensus 161 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 227 (276)
T 2yex_A 161 -----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------- 227 (276)
T ss_dssp -----ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--------
T ss_pred -----hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--------
Confidence 111234568999999999987765 679999999999999999999997644322222211111100
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......+..+.+++.+||+.||++||+++|++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 01123456788999999999999999999999863
No 162
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=349.70 Aligned_cols=249 Identities=27% Similarity=0.420 Sum_probs=185.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 45777889999999999999985 789999999865321 22467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp ECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999997543 45899999999999999999999999 9999999999999999999999999997653211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .. ... ...
T Consensus 167 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~---------~~~-~~~ 228 (278)
T 3cok_A 167 -------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LN---------KVV-LAD 228 (278)
T ss_dssp --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------CC-SSC
T ss_pred -------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HH---------HHh-hcc
Confidence 112235689999999999998999999999999999999999999975332111 10 000 011
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+...+.++.+++.+||+.||++||++++++++
T Consensus 229 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 229 YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 12344567789999999999999999999999863
No 163
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7.6e-39 Score=356.19 Aligned_cols=260 Identities=27% Similarity=0.436 Sum_probs=209.3
Q ss_pred HcCCCCCceeeeeCCeEEEEEEE------CCCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGIL------SDNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
.++|...+.||+|+||.||+|.+ .+++.||||++... ......++.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 45788889999999999999984 24778999999754 344556799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCC-----CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEe
Q 002158 697 MLVYEFVPNGTLRDWLSGRTK-----ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVA 768 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~ 768 (958)
++||||+++++|.+++..... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999976532 34899999999999999999999999 999999999999984 4469999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~ 847 (958)
|||+++....... ........||+.|+|||++.+..++.++||||||+++|||++ |..||...... .......
T Consensus 186 Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~ 259 (327)
T 2yfx_A 186 DFGMARDIYRASY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVT 259 (327)
T ss_dssp CCHHHHHHHC-----------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHH
T ss_pred ccccccccccccc-----cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-HHHHHHh
Confidence 9999975432211 111233568899999999999999999999999999999998 99999754432 1111111
Q ss_pred hcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 848 DSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 848 ~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
.......+..++..+.+++.+||+.||.+||++.+++++|+.+..
T Consensus 260 ---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 260 ---------SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp ---------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 111223345667889999999999999999999999999998764
No 164
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.1e-38 Score=353.84 Aligned_cols=248 Identities=22% Similarity=0.373 Sum_probs=208.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+|...+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 46777899999999999999986 5789999998653 2344567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.... .+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 121 e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 121 ELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999987543 4899999999999999999999999 9999999999999999999999999998653221
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||............. . ..
T Consensus 196 ~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~----------~~ 257 (335)
T 2owb_A 196 E-------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-K----------NE 257 (335)
T ss_dssp C-------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-H----------TC
T ss_pred c-------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh-c----------CC
Confidence 1 1233569999999999999999999999999999999999999997544322211111 1 11
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+..++..+.+++.+||+.||++||+++|++++
T Consensus 258 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 12344566788999999999999999999999975
No 165
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=365.26 Aligned_cols=266 Identities=24% Similarity=0.291 Sum_probs=212.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC--eEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG--EQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lV~ 700 (958)
++|...+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46778889999999999999987 58999999997543 234567889999999999999999999998755 789999
Q ss_pred EecCCCCHHHHhccCCC-CCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe----cCCCCeEEeeeeeecc
Q 002158 701 EFVPNGTLRDWLSGRTK-ENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL----DSNLNAKVADFGLSRL 775 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl----~~~~~~kl~DFGla~~ 775 (958)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 99999999999976432 33899999999999999999999999 9999999999999 7788899999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc--------CCCCCcchhhhHHHHHHHHHhCCCCCCCCc---hhHHHHH
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT--------HKLTDKSDVYSLGVVLLELLTGMQPISHGK---NIVREVN 844 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DV~S~Gv~l~elltG~~P~~~~~---~~~~~~~ 844 (958)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+.
T Consensus 166 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~ 237 (396)
T 4eut_A 166 LEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237 (396)
T ss_dssp CCCGG--------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHH
T ss_pred ccCCC--------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHH
Confidence 53221 1223569999999999875 567789999999999999999999996322 1111111
Q ss_pred HHhhcCcchhhh-------------c---ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 845 VARDSGMVFSII-------------D---NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 845 ~~~~~~~~~~~i-------------~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
...... ....+ . +.....+...+..+.+++.+||+.||++||+++|+++.+++++..
T Consensus 238 ~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 238 KIITGK-PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHHHSC-CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred HHhcCC-CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 111110 00000 0 011234578899999999999999999999999999999998754
No 166
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.6e-38 Score=347.11 Aligned_cols=249 Identities=25% Similarity=0.459 Sum_probs=201.9
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe----CCeEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE----EGEQML 698 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~l 698 (958)
.|...+.||+|+||+||+|.+. ++..||+|++... .....+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3556678999999999999986 6889999998653 34455679999999999999999999999865 356899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-CCCCeEEeeeeeecccc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD-SNLNAKVADFGLSRLAP 777 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla~~~~ 777 (958)
||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||||||+||+++ .++.+||+|||+++...
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 999999999999997543 4899999999999999999999875 4599999999999997 78999999999997532
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
. .......||+.|+|||++. ..++.++||||+|+++|||++|+.||....................
T Consensus 184 ~---------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---- 249 (290)
T 1t4h_A 184 A---------SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA---- 249 (290)
T ss_dssp T---------TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG----
T ss_pred c---------cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc----
Confidence 1 1123456999999999876 4589999999999999999999999986555444433322211111
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+...+..+.+++.+||+.||++||+++|++++
T Consensus 250 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 ----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1122334678999999999999999999999864
No 167
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=360.64 Aligned_cols=243 Identities=22% Similarity=0.361 Sum_probs=204.1
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--------cHHHHHHHHHHHHccCCCCcceEEEEEEeC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--------GQNEFLTEIKLLSRLHHRNLVSLLGYCDEE 693 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 693 (958)
..++|...+.||+|+||+||+|.+. +++.||||++...... ....+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4567888999999999999999975 6899999998764311 223577899999999999999999999999
Q ss_pred CeEEEEEEecCCC-CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 694 GEQMLVYEFVPNG-TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 694 ~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999777 9999997554 4899999999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM 851 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~ 851 (958)
++...... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||......
T Consensus 177 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------ 236 (335)
T 3dls_A 177 AAYLERGK--------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------ 236 (335)
T ss_dssp CEECCTTC--------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------
T ss_pred ceECCCCC--------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------
Confidence 98653211 1233569999999999988877 77999999999999999999999642210
Q ss_pred chhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 852 VFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 852 ~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. .....+..++..+.+++.+||+.||++||+++|++++
T Consensus 237 ----~~-~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ----VE-AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----TT-TCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----Hh-hccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 1112233456789999999999999999999999985
No 168
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.5e-38 Score=345.93 Aligned_cols=256 Identities=22% Similarity=0.335 Sum_probs=205.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh------hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL------QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
++|...+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46788899999999999999987 689999999875422 13578999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC----CeEEeeeeee
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL----NAKVADFGLS 773 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~----~~kl~DFGla 773 (958)
+||||+++++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999997543 4899999999999999999999999 99999999999998877 8999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....................
T Consensus 160 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T 3bhy_A 160 HKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 231 (283)
T ss_dssp EECC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC
T ss_pred eeccCCC--------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCc
Confidence 7653211 12234689999999999999999999999999999999999999976543222111111100000
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE--LENIL 900 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 900 (958)
.......+..+.+++.+||+.||++||+++|++++ ++.+.
T Consensus 232 -------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 232 -------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp -------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred -------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 00012345678999999999999999999999984 44443
No 169
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=347.97 Aligned_cols=251 Identities=25% Similarity=0.387 Sum_probs=203.5
Q ss_pred CCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEecCC
Q 002158 627 FSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
|.....||+|+||.||+|.+. +++.||||.+........+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 445568999999999999975 6889999999876666667899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCC-CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-CCCeEEeeeeeecccccCCCCC
Q 002158 706 GTLRDWLSGRT-KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-NLNAKVADFGLSRLAPVLDDEG 783 (958)
Q Consensus 706 gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~~~~~~~ 783 (958)
++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--- 177 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--- 177 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC---
Confidence 99999997653 334678899999999999999999999 999999999999987 8999999999997653211
Q ss_pred CccceeeeeccCCCCccChhhhccCC--CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 784 TMPTHVSTIVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 784 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.............. ......
T Consensus 178 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--------~~~~~~ 245 (295)
T 2clq_A 178 ----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG--------MFKVHP 245 (295)
T ss_dssp -------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHH--------HHCCCC
T ss_pred ----CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhc--------cccccc
Confidence 1122456899999999997654 78899999999999999999999964332221111110 111123
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+..++..+.+++.+||+.||++||+++|++++
T Consensus 246 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 246 EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 3455677889999999999999999999999863
No 170
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-38 Score=363.25 Aligned_cols=266 Identities=26% Similarity=0.371 Sum_probs=196.3
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCC--eE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEG--EQ 696 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~ 696 (958)
..++|...+.||+|+||.||+|.+. +++.||||++... ......++.+|+.+++++. ||||+++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4567888999999999999999976 6899999998653 3445567889999999997 999999999997544 78
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||++ ++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|+..
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999996 6999999753 4889999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCC--------------CccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHH
Q 002158 777 PVLDDEG--------------TMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVR 841 (958)
Q Consensus 777 ~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~ 841 (958)
....... ...........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 3211100 001122344679999999999987 6789999999999999999999999986554333
Q ss_pred HHHHHhhcCcch-hhh----------------------cccCCC-------------CChHHHHHHHHHHHHccccCCCC
Q 002158 842 EVNVARDSGMVF-SII----------------------DNRMGS-------------YPSECVERFVTLALRCCHDKPEH 885 (958)
Q Consensus 842 ~~~~~~~~~~~~-~~i----------------------~~~~~~-------------~~~~~~~~l~~li~~cl~~dP~~ 885 (958)
........+... +.+ ...... .+..++..+.+++.+||+.||++
T Consensus 240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 222111100000 000 000000 01134567899999999999999
Q ss_pred CCCHHHHHHH
Q 002158 886 RPSMSDVVRE 895 (958)
Q Consensus 886 RPs~~evl~~ 895 (958)
|||++|++++
T Consensus 320 R~t~~e~l~H 329 (388)
T 3oz6_A 320 RISANDALKH 329 (388)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhCC
Confidence 9999999975
No 171
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.4e-38 Score=369.99 Aligned_cols=267 Identities=21% Similarity=0.306 Sum_probs=211.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCC-CCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHH-RNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||.||+|.+. +++.||||++...... .++.+|+++++.++| +++..+..++...+..++||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 57888999999999999999974 6899999988754322 357899999999976 5666666777788899999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe---cCCCCeEEeeeeeecccccC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL---DSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl---~~~~~~kl~DFGla~~~~~~ 779 (958)
+ +++|.+++.... ..+++.+++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 85 ~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 85 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred C-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 9 999999997543 34999999999999999999999999 9999999999999 68899999999999876544
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcCcchhhhc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN--IVREVNVARDSGMVFSIID 857 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~--~~~~~~~~~~~~~~~~~i~ 857 (958)
......+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+...... .....+
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-~~~~~~- 237 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-KVATSI- 237 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-HHHSCH-
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-cccccH-
Confidence 33222222333456799999999999999999999999999999999999999976432 11111111100 000000
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhC
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMF 903 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 903 (958)
...+..++.++.+++.+||+.+|++||++++|++.|++++...
T Consensus 238 ---~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 238 ---EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp ---HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ---HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 0111234578999999999999999999999999999987654
No 172
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-38 Score=350.93 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=205.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.++|...+.||+|+||+||+|... +|+.||||++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456888899999999999999986 7899999999876555556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe---cCCCCeEEeeeeeecccccC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL---DSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl---~~~~~~kl~DFGla~~~~~~ 779 (958)
+++++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++....
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~- 161 (304)
T 2jam_A 88 VSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN- 161 (304)
T ss_dssp CCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC-
T ss_pred CCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCC-
Confidence 99999999997543 4899999999999999999999999 9999999999999 7889999999999875321
Q ss_pred CCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ........... .
T Consensus 162 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~------~ 226 (304)
T 2jam_A 162 --------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEGYYE------F 226 (304)
T ss_dssp --------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHCCCC------C
T ss_pred --------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCC------C
Confidence 11123469999999999999999999999999999999999999997544322 11111111000 0
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........+..+.+++.+||+.||++||+++|++++
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 012234556789999999999999999999999975
No 173
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.7e-39 Score=348.87 Aligned_cols=246 Identities=23% Similarity=0.364 Sum_probs=203.2
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 698 (958)
..++|...+.||+|+||+||+|.+. +++.||||++.... .....++.+|+..+..+ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3457888899999999999999986 79999999987642 33456788999999999 99999999999999999999
Q ss_pred EEEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC--------------
Q 002158 699 VYEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-------------- 762 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-------------- 762 (958)
||||+++++|.+++.... ...+++.++..++.|+++||+|||+++ |+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997542 245899999999999999999999999 9999999999999844
Q ss_pred -----CCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCC
Q 002158 763 -----LNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHG 836 (958)
Q Consensus 763 -----~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~ 836 (958)
..+||+|||.++..... ....||+.|+|||++.+. .++.++||||||+++|||++|..|+...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP-----------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS-----------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS
T ss_pred ccCCceEEEEcccccccccCCc-----------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch
Confidence 47999999998865321 123489999999999876 5667999999999999999998877544
Q ss_pred chhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 837 KNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..... +........+..++..+.+++.+||+.||++||++.|++++
T Consensus 235 ~~~~~-------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 235 DQWHE-------------IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHH-------------HHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred hHHHH-------------HHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 32211 11122233455667889999999999999999999999864
No 174
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-38 Score=347.07 Aligned_cols=246 Identities=26% Similarity=0.379 Sum_probs=206.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46778889999999999999986 57899999986432 123467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 9999999999997643 4899999999999999999999999 999999999999999999999999998754321
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
......|++.|+|||++.+..++.++||||||+++|||++|+.||........... .. ...
T Consensus 168 --------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~----------~~~ 228 (284)
T 2vgo_A 168 --------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR-IV----------NVD 228 (284)
T ss_dssp --------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-HH----------TTC
T ss_pred --------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH-Hh----------ccc
Confidence 11235689999999999999999999999999999999999999976543222111 11 111
Q ss_pred CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 861 GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 861 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..++...+..+.+++.+|++.||.+||+++|++++
T Consensus 229 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 229 LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 23345567889999999999999999999999975
No 175
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.7e-39 Score=356.88 Aligned_cols=259 Identities=22% Similarity=0.332 Sum_probs=196.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh--cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ--GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.++|...+.||+|+||+||+|.+. +++.||||++...... ..+.+.+|++++++++||||+++++++..++..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 356888899999999999999976 7899999999754332 2456789999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-----CCCCeEEeeeeeecc
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD-----SNLNAKVADFGLSRL 775 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~-----~~~~~kl~DFGla~~ 775 (958)
||++ |+|.+++..... +++..+..++.|++.||+|||+++ |+||||||+|||++ +++.+||+|||+++.
T Consensus 113 e~~~-~~L~~~~~~~~~--~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNPD--VSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp ECCS-EEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred ecCC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9997 599999976543 899999999999999999999999 99999999999994 455699999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||................+....
T Consensus 187 ~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (329)
T 3gbz_A 187 FGIPI-------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDD 259 (329)
T ss_dssp HC------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCT
T ss_pred cCCcc-------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCch
Confidence 53211 122334689999999999875 4899999999999999999999999766544333222211110000
Q ss_pred h----h------cccCCC---------CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 I----I------DNRMGS---------YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~----i------~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. . ...... .+...+.++.+++.+||+.||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0 0 000000 011245778999999999999999999999863
No 176
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=359.12 Aligned_cols=266 Identities=22% Similarity=0.359 Sum_probs=194.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEE--------eC
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCD--------EE 693 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~--------~~ 693 (958)
..+|...+.||+|+||.||+|.+. +++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 346788899999999999999976 68999999997776666778999999999996 999999999994 33
Q ss_pred CeEEEEEEecCCCCHHHHhccC-CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGR-TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
...++||||++ |+|.+++... ....+++.++..++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence 45899999995 7999988642 2345999999999999999999999875 4599999999999999999999999999
Q ss_pred ecccccCCCCCCc-----cceeeeeccCCCCccChhhh---ccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002158 773 SRLAPVLDDEGTM-----PTHVSTIVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVN 844 (958)
Q Consensus 773 a~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~ 844 (958)
++........... .........||+.|+|||++ .+..++.++||||||+++|||++|+.||........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--- 261 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI--- 261 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh---
Confidence 9865432211100 00112245699999999998 566788899999999999999999999964332110
Q ss_pred HHhhcCcchhhhcccC-CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002158 845 VARDSGMVFSIIDNRM-GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFPE 905 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 905 (958)
..... ...+...+..+.+++.+||+.||++||+++|++++|+.+......
T Consensus 262 -----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 262 -----------VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ---------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred -----------hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 00001 111223345688999999999999999999999999998876543
No 177
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.3e-39 Score=359.79 Aligned_cols=241 Identities=22% Similarity=0.317 Sum_probs=181.0
Q ss_pred CceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 630 STQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
.+.||+|+||+||+|.++ +++.||||++... ....+.+|+.+++.+. ||||+++++++.+++..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999986 6899999999653 3456789999999997 9999999999999999999999999999
Q ss_pred HHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC---CeEEeeeeeecccccCCCCCC
Q 002158 708 LRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL---NAKVADFGLSRLAPVLDDEGT 784 (958)
Q Consensus 708 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~---~~kl~DFGla~~~~~~~~~~~ 784 (958)
|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||+++......
T Consensus 93 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---- 163 (325)
T 3kn6_A 93 LFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---- 163 (325)
T ss_dssp HHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC----
Confidence 999997653 4999999999999999999999999 99999999999997765 89999999998643211
Q ss_pred ccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch------hHHHHHHHhhcCcchhhhcc
Q 002158 785 MPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN------IVREVNVARDSGMVFSIIDN 858 (958)
Q Consensus 785 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~------~~~~~~~~~~~~~~~~~i~~ 858 (958)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....... +..
T Consensus 164 ---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~----------i~~ 230 (325)
T 3kn6_A 164 ---QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK----------IKK 230 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH----------HTT
T ss_pred ---CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH----------HHc
Confidence 112345689999999999999999999999999999999999999975321 1111111 111
Q ss_pred cCCCCC----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 859 RMGSYP----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 859 ~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+ ..++.++.+++.+||+.||++||+++|++++
T Consensus 231 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 231 GDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp TCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 111112 2346789999999999999999999998853
No 178
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.9e-40 Score=360.15 Aligned_cols=258 Identities=21% Similarity=0.373 Sum_probs=189.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHc--cCCCCcceEEEEEEeCC----eEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSR--LHHRNLVSLLGYCDEEG----EQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~l 698 (958)
++|...+.||+|+||+||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 5788999999999999999987 4889999998653 34567789999888 79999999999998776 7899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhh--------hcCCCCeeccCCCccceEecCCCCeEEeee
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLH--------TEAHPPVFHRDIKASNILLDSNLNAKVADF 770 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~iiH~Dikp~NILl~~~~~~kl~DF 770 (958)
||||+++|+|.++++.. .+++.++.+++.|++.||+||| +.+ |+||||||+|||++.++.+||+||
T Consensus 79 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999999654 3888999999999999999999 777 999999999999999999999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhccC------CCCCcchhhhHHHHHHHHHhC----------CCCCC
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVLLELLTG----------MQPIS 834 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~S~Gv~l~elltG----------~~P~~ 834 (958)
|+++........ .........||+.|+|||++.+. .++.++|||||||++|||++| ..||.
T Consensus 153 g~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 153 GLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CC-CCEETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred CcceeccCCCcc---cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 999765332211 01112334699999999999776 344689999999999999999 66664
Q ss_pred CCchhHHHHHHHhhcCcchh-hhcccC-CCCC-----hHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 835 HGKNIVREVNVARDSGMVFS-IIDNRM-GSYP-----SECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~-~i~~~~-~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
...... ........ ...... ...+ ..++..+.+++.+||+.||++|||++++++.|+++.+
T Consensus 230 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 230 DLVPSD------PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTCC-C------CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred ccCCCC------ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 321100 00000001 111111 2222 3678899999999999999999999999999988764
No 179
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.8e-38 Score=346.75 Aligned_cols=260 Identities=25% Similarity=0.368 Sum_probs=204.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|...+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46778899999999999999986 689999999865432 223678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|++ ++|.+++.......+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 69999998766556899999999999999999999999 99999999999999999999999999976532111
Q ss_pred CCCccceeeeeccCCCCccChhhhccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh----
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII---- 856 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i---- 856 (958)
......||+.|+|||++.+.. ++.++||||||+++|||++|+.||................+......
T Consensus 159 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 159 -------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp -------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred -------ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHh
Confidence 112345899999999998765 78899999999999999999999987654433332222111110000
Q ss_pred ------cccCCC--------CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 ------DNRMGS--------YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ------~~~~~~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... .....+.++.+++.+|++.||++||+++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 012345788999999999999999999999973
No 180
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.6e-39 Score=375.70 Aligned_cols=250 Identities=22% Similarity=0.353 Sum_probs=207.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||+||+|+++ +|+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56778889999999999999986 69999999986532 123467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccccc
Q 002158 701 EFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPV 778 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 778 (958)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999997643 345999999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch---hHHHHHHHhhcCcchhh
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN---IVREVNVARDSGMVFSI 855 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~---~~~~~~~~~~~~~~~~~ 855 (958)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 342 ~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~---------- 404 (543)
T 3c4z_A 342 GQ-------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR---------- 404 (543)
T ss_dssp TC-------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH----------
T ss_pred CC-------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH----------
Confidence 11 112345799999999999999999999999999999999999999975421 1111111
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSM-----SDVVR 894 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 894 (958)
+......+|..++..+.+++.+||+.||++||++ +++++
T Consensus 405 i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 405 VLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred HhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1111223456677889999999999999999975 56664
No 181
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=355.45 Aligned_cols=261 Identities=25% Similarity=0.336 Sum_probs=200.2
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc-----HHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG-----QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
...+|...+.||+|+||.||+|.+. +|+.||||++....... .+.+.+|++++++++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4567899999999999999999986 68999999987532221 23688999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++ +|.+++.... ..+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 999999975 8999987543 45889999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh-
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS- 854 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~- 854 (958)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|..||................+....
T Consensus 163 ~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 163 GSPN-------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 235 (346)
T ss_dssp TSCC-------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred cCCc-------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChh
Confidence 3211 112345689999999999764 4788999999999999999999999765543332222211111000
Q ss_pred hh-------c----ccCCCCC-----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 II-------D----NRMGSYP-----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~i-------~----~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. + ......+ ...+..+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0 0000111 3345789999999999999999999999975
No 182
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.1e-38 Score=359.81 Aligned_cols=257 Identities=23% Similarity=0.365 Sum_probs=206.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46788899999999999999986 6899999998765 334456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
+++++|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++....
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--- 184 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 184 (360)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccc---
Confidence 99999999997643 389999999999999999999996 8 99999999999999999999999999875421
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh--------------
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR-------------- 847 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~-------------- 847 (958)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||..............
T Consensus 185 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3eqc_A 185 ------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR 258 (360)
T ss_dssp ------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------
T ss_pred ------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcc
Confidence 112335699999999999999999999999999999999999999975443211110000
Q ss_pred --------------hcCcchh----hhcccCCCC-ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 848 --------------DSGMVFS----IIDNRMGSY-PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 848 --------------~~~~~~~----~i~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+ ......... +..++..+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 259 TPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000 001111111 22356789999999999999999999999976
No 183
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=356.99 Aligned_cols=259 Identities=24% Similarity=0.334 Sum_probs=197.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhc-HHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQG-QNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
++|...+.||+|+||+||+|.+. +++.||||++....... ...+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46778899999999999999986 78999999987543222 12456899999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
++ |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--- 153 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP--- 153 (324)
T ss_dssp CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC---
Confidence 96 69999987653 34899999999999999999999999 999999999999999999999999999754321
Q ss_pred CCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc-----chhhh
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM-----VFSII 856 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~-----~~~~i 856 (958)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||................+. .....
T Consensus 154 ----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 154 ----TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp -------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred ----ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhh
Confidence 112233468999999999976 56899999999999999999999999765433222211111000 00000
Q ss_pred c---------ccC-----CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 D---------NRM-----GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~---------~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ... .......+..+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 000 00112345678999999999999999999999974
No 184
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.8e-38 Score=351.28 Aligned_cols=271 Identities=20% Similarity=0.342 Sum_probs=213.2
Q ss_pred cChHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHc--cCCCCcceEEEEEEe
Q 002158 615 FKFKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSR--LHHRNLVSLLGYCDE 692 (958)
Q Consensus 615 ~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~ 692 (958)
.++..-....++|...+.||+|+||+||+|.+ +++.||||++.. .....+.+|+++++. ++||||+++++++..
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 44444455677899999999999999999998 589999999964 335568889999988 789999999999988
Q ss_pred CC----eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhh--------hcCCCCeeccCCCccceEec
Q 002158 693 EG----EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLH--------TEAHPPVFHRDIKASNILLD 760 (958)
Q Consensus 693 ~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~iiH~Dikp~NILl~ 760 (958)
.. ..++||||+++|+|.+++... .+++.+++.++.|++.||+||| +.+ |+||||||+|||++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVK 181 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEEC
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEEC
Confidence 76 789999999999999999754 3899999999999999999999 777 99999999999999
Q ss_pred CCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCC------CCCcchhhhHHHHHHHHHhC-----
Q 002158 761 SNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVLLELLTG----- 829 (958)
Q Consensus 761 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DV~S~Gv~l~elltG----- 829 (958)
.++.+||+|||+++........ .........||+.|+|||++.+.. ++.++||||||+++|||++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 258 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTE---EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred CCCCEEEEECCCceeccccccc---cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCC
Confidence 9999999999999765332210 011223456999999999997762 33689999999999999999
Q ss_pred -----CCCCCCCc----hhHHHHHHHhhcCcchhhhcccCCC--CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002158 830 -----MQPISHGK----NIVREVNVARDSGMVFSIIDNRMGS--YPSECVERFVTLALRCCHDKPEHRPSMSDVVRELEN 898 (958)
Q Consensus 830 -----~~P~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 898 (958)
..||.... .............. ...... ....++..+.+++.+||+.||++||+++|++++|++
T Consensus 259 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 259 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL-----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp BCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC-----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccccCccccCcCcccHHHHHHHHHHHHh-----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 77886432 11111111111110 011100 124678899999999999999999999999999999
Q ss_pred hHhhC
Q 002158 899 ILKMF 903 (958)
Q Consensus 899 ~~~~~ 903 (958)
+.+..
T Consensus 334 i~~~~ 338 (342)
T 1b6c_B 334 LSQQE 338 (342)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 87653
No 185
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.9e-38 Score=347.44 Aligned_cols=249 Identities=25% Similarity=0.408 Sum_probs=209.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
+.|...+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 45778899999999999999975 68999999987543 34467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 102 LGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 9999999999643 4899999999999999999999999 9999999999999999999999999997653211
Q ss_pred CCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCC
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGS 862 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 862 (958)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||............. ......
T Consensus 174 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----------~~~~~~ 238 (303)
T 3a7i_A 174 -----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP----------KNNPPT 238 (303)
T ss_dssp -----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH----------HSCCCC
T ss_pred -----cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh----------cCCCCC
Confidence 11234568999999999999999999999999999999999999997544322211111 111223
Q ss_pred CChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 863 YPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 863 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
.+..++..+.+++.+||+.||++||++.|++++.
T Consensus 239 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 239 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 3445667899999999999999999999999864
No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-38 Score=356.25 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=202.4
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 700 (958)
..++|...+.||+|+||+||+|.++ +++.||||++...... +.+|++++.++ +||||+++++++.+++..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3457888899999999999999986 6899999999764322 34788888888 7999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC----CCeEEeeeeeeccc
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN----LNAKVADFGLSRLA 776 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~----~~~kl~DFGla~~~ 776 (958)
||+++|+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||+.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999997543 4899999999999999999999999 9999999999998443 35999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc--hhHHHHHHHhhcCcchh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK--NIVREVNVARDSGMVFS 854 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~--~~~~~~~~~~~~~~~~~ 854 (958)
..... ......||+.|+|||++.+..++.++|||||||++|||++|..||.... ...............
T Consensus 171 ~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-- 241 (342)
T 2qr7_A 171 RAENG-------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS-- 241 (342)
T ss_dssp BCTTC-------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC--
T ss_pred cCCCC-------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc--
Confidence 32211 1234568999999999998889999999999999999999999997532 222222211111100
Q ss_pred hhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+...+..+.+++.+||+.||++||+++|++++
T Consensus 242 ----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 ----LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ----CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ----cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0011234566789999999999999999999999976
No 187
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1e-38 Score=350.73 Aligned_cols=253 Identities=25% Similarity=0.391 Sum_probs=203.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYEF 702 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 702 (958)
.+.|+..+.||+|+||+||+|.+. +++.||+|++........+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 357888899999999999999986 5899999999876666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCC
Q 002158 703 VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDE 782 (958)
Q Consensus 703 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 782 (958)
+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 170 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--- 170 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH---
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999987533 34899999999999999999999999 999999999999999999999999997543111
Q ss_pred CCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 783 GTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 783 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
........||+.|+|||++. ...++.++||||||+++|||++|+.||.................
T Consensus 171 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------- 239 (302)
T 2j7t_A 171 ----LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP------- 239 (302)
T ss_dssp ----HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-------
T ss_pred ----ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC-------
Confidence 11122346899999999984 56788999999999999999999999976543322221111110
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+..++..+.+++.+||+.||++||++++++++
T Consensus 240 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 240 -PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0112244567789999999999999999999999863
No 188
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=359.78 Aligned_cols=254 Identities=23% Similarity=0.350 Sum_probs=198.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC------e
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG------E 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 695 (958)
++|...+.||+|+||.||+|.+. +|+.||||++... .....+++.+|++++++++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 46778889999999999999985 6999999998653 2334567899999999999999999999997653 4
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||||+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 69999999 88999999753 3899999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch-
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF- 853 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~- 853 (958)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..............+...
T Consensus 178 ~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~ 247 (367)
T 1cm8_A 178 ADS----------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA 247 (367)
T ss_dssp CCS----------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred ccc----------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 421 1223568999999999987 6799999999999999999999999986554332222111111100
Q ss_pred hh------------h-------cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SI------------I-------DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~------------i-------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+. + ...........+..+.+++.+|++.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 248 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00 0 000111223456789999999999999999999999985
No 189
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.8e-38 Score=352.75 Aligned_cols=259 Identities=22% Similarity=0.368 Sum_probs=207.8
Q ss_pred hHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--------hcHHHHHHHHHHHHcc-CCCCcceE
Q 002158 617 FKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--------QGQNEFLTEIKLLSRL-HHRNLVSL 686 (958)
Q Consensus 617 ~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l 686 (958)
+.......++|...+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999986 799999999865431 1134678999999999 79999999
Q ss_pred EEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeE
Q 002158 687 LGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAK 766 (958)
Q Consensus 687 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~k 766 (958)
++++...+..++||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEE
Confidence 999999999999999999999999997543 4899999999999999999999999 99999999999999999999
Q ss_pred EeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC------CCCCcchhhhHHHHHHHHHhCCCCCCCCchhH
Q 002158 767 VADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVLLELLTGMQPISHGKNIV 840 (958)
Q Consensus 767 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~ 840 (958)
|+|||++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 241 l~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 312 (365)
T 2y7j_A 241 LSDFGFSCHLEPGE--------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL 312 (365)
T ss_dssp ECCCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEecCcccccCCCc--------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH
Confidence 99999987653211 12345699999999998643 57889999999999999999999997644322
Q ss_pred HHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 841 REVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 841 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ........... .+. ....+..+.+++.+||+.||++||+++|++++
T Consensus 313 ~~-~~i~~~~~~~~--~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 313 ML-RMIMEGQYQFS--SPE----WDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HH-HHHHHTCCCCC--HHH----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HH-HHHHhCCCCCC--Ccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 21 11111100000 000 01234678999999999999999999999874
No 190
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=362.16 Aligned_cols=250 Identities=26% Similarity=0.303 Sum_probs=203.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEE----CCCcEEEEEEeccCC----hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL----SDNTTVAIKRAEEGS----LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGE 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 695 (958)
++|...+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++..++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4688889999999999999997 368999999986532 12334577899999999 69999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||||+++|+|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999997643 4899999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCch---hHHHHHHHhhcC
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLTGMQPISHGKN---IVREVNVARDSG 850 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~---~~~~~~~~~~~~ 850 (958)
..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .......
T Consensus 209 ~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~----- 277 (355)
T 1vzo_A 209 FVADE------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR----- 277 (355)
T ss_dssp CCGGG------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH-----
T ss_pred cccCC------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHH-----
Confidence 53211 112234579999999999986 3478899999999999999999999964321 1111111
Q ss_pred cchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 002158 851 MVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRP-----SMSDVVRE 895 (958)
Q Consensus 851 ~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 895 (958)
+.......+..++..+.+++.+||+.||++|| +++|++++
T Consensus 278 -----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 278 -----ILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp -----HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred -----HhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11112334556678899999999999999999 99999875
No 191
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=9.4e-38 Score=343.64 Aligned_cols=252 Identities=22% Similarity=0.360 Sum_probs=203.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC----hhcHHHHHHHHHHHHccCCCCcceEEEEEE--eCCeE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS----LQGQNEFLTEIKLLSRLHHRNLVSLLGYCD--EEGEQ 696 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~ 696 (958)
.++|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 357899999999999999999975 68899999986532 234567999999999999999999999984 45688
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||++++ |.+++.......+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999766 888887665667999999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCC--CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
..... ........||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... .......
T Consensus 160 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~i~------- 226 (305)
T 2wtk_C 160 HPFAA-----DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-KLFENIG------- 226 (305)
T ss_dssp CTTCS-----SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH-------
T ss_pred Ccccc-----ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHHHh-------
Confidence 32221 12223456999999999997654 367999999999999999999999754322 2211111
Q ss_pred hhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+..++..+.+++.+||+.||++||+++|++++
T Consensus 227 ---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 227 ---KGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---HCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---cCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11123345567889999999999999999999999985
No 192
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.2e-38 Score=345.54 Aligned_cols=247 Identities=25% Similarity=0.370 Sum_probs=198.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
++|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 46777889999999999999987 79999999986532 223457899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~- 164 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG- 164 (276)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred eccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC-
Confidence 9999999999997543 3899999999999999999999999 999999999999999999999999999765321
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhccc
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNR 859 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~ 859 (958)
.......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ...... ...
T Consensus 165 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~----------~~~ 226 (276)
T 2h6d_A 165 -------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP-TLFKKI----------RGG 226 (276)
T ss_dssp -------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH----------HHC
T ss_pred -------cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHh----------hcC
Confidence 11223468999999999987765 57999999999999999999999754322 111111 111
Q ss_pred CCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 860 MGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 860 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+...+..+.+++.+||+.||++||+++|++++
T Consensus 227 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 227 VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 222344566789999999999999999999999985
No 193
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.9e-38 Score=364.30 Aligned_cols=256 Identities=21% Similarity=0.269 Sum_probs=203.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc------CCCCcceEEEEEEeCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL------HHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~~ 697 (958)
.+|...+.||+|+||+||+|.+. +++.||||++... ....+.+.+|+++++.+ +|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 46788899999999999999976 5899999999763 33345678898888887 5779999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC--eEEeeeeeecc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN--AKVADFGLSRL 775 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~--~kl~DFGla~~ 775 (958)
+||||++ ++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999995 79999998776666999999999999999999999999 999999999999999987 99999999975
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch--
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF-- 853 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~-- 853 (958)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||................+...
T Consensus 252 ~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~ 321 (429)
T 3kvw_A 252 EHQ----------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321 (429)
T ss_dssp TTC----------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred cCC----------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 421 12235689999999999999999999999999999999999999976544322211111100000
Q ss_pred ---------hhhccc------------------------C------C-------CCChHHHHHHHHHHHHccccCCCCCC
Q 002158 854 ---------SIIDNR------------------------M------G-------SYPSECVERFVTLALRCCHDKPEHRP 887 (958)
Q Consensus 854 ---------~~i~~~------------------------~------~-------~~~~~~~~~l~~li~~cl~~dP~~RP 887 (958)
..++.. . . ..+...+..+.+++.+||+.||++||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rp 401 (429)
T 3kvw_A 322 LLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401 (429)
T ss_dssp HHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCC
Confidence 000000 0 0 00111256789999999999999999
Q ss_pred CHHHHHHH
Q 002158 888 SMSDVVRE 895 (958)
Q Consensus 888 s~~evl~~ 895 (958)
|++|++++
T Consensus 402 ta~e~L~H 409 (429)
T 3kvw_A 402 TPGQALRH 409 (429)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhCC
Confidence 99999974
No 194
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.6e-39 Score=347.15 Aligned_cols=255 Identities=25% Similarity=0.399 Sum_probs=205.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQMLV 699 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV 699 (958)
++|...+.||+|+||+||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 46778899999999999999986 6899999998754 33445679999999999999999999998854 5789999
Q ss_pred EEecCCCCHHHHhccCC--CCCchHHHHHHHHHHHHHHHHHhhhcC--CCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 700 YEFVPNGTLRDWLSGRT--KENLNFAMRLRVALDSAKGILYLHTEA--HPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~--~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
|||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 99999999999997532 344899999999999999999999986 24599999999999999999999999999976
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
.... ........||+.|+|||++.+..++.++||||||+++|||++|+.||...... ......
T Consensus 166 ~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~i--------- 228 (279)
T 2w5a_A 166 LNHD-------TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-ELAGKI--------- 228 (279)
T ss_dssp C----------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH---------
T ss_pred eccc-------cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-HHHHHH---------
Confidence 4321 11122356999999999999999999999999999999999999999754422 111111
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVREL 896 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 896 (958)
........+..++..+.+++.+||+.||++||+++|+++++
T Consensus 229 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 229 REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred hhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 11122234556678899999999999999999999999754
No 195
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=356.96 Aligned_cols=256 Identities=16% Similarity=0.206 Sum_probs=208.9
Q ss_pred HHcCCCCCceeeeeCCeEEEEEE------ECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC---CCCcceEEEEEEeC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGI------LSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH---HRNLVSLLGYCDEE 693 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 693 (958)
..++|...+.||+|+||+||+|. ..+++.||||++.... ..++.+|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34578888999999999999994 3468899999997643 446788888888886 99999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhccC---CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---------
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGR---TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS--------- 761 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~--------- 761 (958)
+..++||||+++|+|.+++... ....+++.+++.++.|+++||+|||+++ |+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence 9999999999999999999742 2345999999999999999999999999 999999999999998
Q ss_pred --CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchh
Q 002158 762 --NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNI 839 (958)
Q Consensus 762 --~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~ 839 (958)
++.+||+|||+|+....... ........||++|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 291 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPK-----GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCT-----TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred cccCCEEEeeCchhhhhhccCC-----CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence 89999999999976532221 23344567999999999999999999999999999999999999999532210
Q ss_pred HHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHHhHhhCC
Q 002158 840 VREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHR-PSMSDVVRELENILKMFP 904 (958)
Q Consensus 840 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~~~~~~~ 904 (958)
. . .+.......+ ..+.+.+++..|++.+|.+| |+++++.+.|++.+....
T Consensus 292 -----------~-~-~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 292 -----------E-C-KPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp -----------E-E-EECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -----------c-e-eechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 0 0 0111111112 35678899999999999999 788899999998886543
No 196
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=356.02 Aligned_cols=262 Identities=26% Similarity=0.414 Sum_probs=205.2
Q ss_pred ccChHHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEE
Q 002158 614 GFKFKELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCD 691 (958)
Q Consensus 614 ~~~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 691 (958)
.+.+.++....++|...+.||+|+||.||+|.+. +++.||||++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 3444455556778899999999999999999985 78999999987543 3346788999999999 7999999999997
Q ss_pred e------CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCe
Q 002158 692 E------EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNA 765 (958)
Q Consensus 692 ~------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 765 (958)
. .+..++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCE
Confidence 6 468899999999999999998765556899999999999999999999999 9999999999999999999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIV 840 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~ 840 (958)
||+|||+++...... .......||+.|+|||++. +..++.++||||||+++|||++|+.||.......
T Consensus 169 kl~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 241 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241 (326)
T ss_dssp EECCCTTTC--------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred EEeeCcCceecCcCc-------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH
Confidence 999999987543211 1123356899999999997 5678899999999999999999999997654432
Q ss_pred HHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 841 REVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 841 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........ . .....+..++..+.+++.+||+.||.+||++++++++
T Consensus 242 ~~~~~~~~-~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 242 ALFLIPRN-P--------APRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHHS-C--------CCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhhcC-c--------cccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 22211111 0 0111133456789999999999999999999999974
No 197
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8e-39 Score=349.60 Aligned_cols=259 Identities=27% Similarity=0.426 Sum_probs=200.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC--CCc--EEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS--DNT--TVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 697 (958)
++|...+.||+|+||+||+|.+. +++ .||||+++... ....+.+.+|++++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46777889999999999999864 233 68999887542 334567999999999999999999999998765 88
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++++|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999999997542 34899999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
..... ........+|..|+|||++.+..++.++||||||+++|||++ |+.||...... ..........
T Consensus 173 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~~~------ 241 (291)
T 1u46_A 173 QNDDH----YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEG------ 241 (291)
T ss_dssp C-CCE----EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTSC------
T ss_pred ccccc----hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-HHHHHHHccC------
Confidence 32211 112234457889999999999889999999999999999999 99999755432 2221111111
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHh
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILK 901 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 901 (958)
.....+..++..+.+++.+||+.||++||++.++++.|+++..
T Consensus 242 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 242 --ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred --CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 1112344567889999999999999999999999999988754
No 198
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.3e-38 Score=354.99 Aligned_cols=255 Identities=22% Similarity=0.295 Sum_probs=195.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC------e
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG------E 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 695 (958)
++|...+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 46788899999999999999976 6899999998753 3344567899999999999999999999997655 7
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||||++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred eEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 899999996 589888853 3889999999999999999999999 99999999999999999999999999975
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch-h
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF-S 854 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~ 854 (958)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+..............+... +
T Consensus 177 ~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 248 (371)
T 2xrw_A 177 AGT--------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 248 (371)
T ss_dssp ---------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHH
T ss_pred ccc--------ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 422 1112345699999999999999999999999999999999999999986554433322221111000 0
Q ss_pred -----------hhcc---------------cC-CC---CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 -----------IIDN---------------RM-GS---YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 -----------~i~~---------------~~-~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.... .. +. .+...+..+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000 00 00 012346789999999999999999999999985
No 199
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.8e-39 Score=368.55 Aligned_cols=242 Identities=14% Similarity=0.143 Sum_probs=192.1
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC---ChhcHHHHHHHH---HHHHccCCCCcceEE-------EE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG---SLQGQNEFLTEI---KLLSRLHHRNLVSLL-------GY 689 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~ 689 (958)
.++|...+.||+|+||+||+|++. +|+.||||++... .....+.|.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 356777899999999999999974 6999999998743 334457799999 455556899999998 77
Q ss_pred EEeCCe-----------------EEEEEEecCCCCHHHHhccCC-----CCCchHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 002158 690 CDEEGE-----------------QMLVYEFVPNGTLRDWLSGRT-----KENLNFAMRLRVALDSAKGILYLHTEAHPPV 747 (958)
Q Consensus 690 ~~~~~~-----------------~~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~i 747 (958)
+...+. .++||||+ +|+|.+++.... ...+++..++.++.|+++||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 665542 89999999 689999997532 123557889999999999999999999 9
Q ss_pred eccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-----------CCCCcchh
Q 002158 748 FHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-----------KLTDKSDV 816 (958)
Q Consensus 748 iH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DV 816 (958)
+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dv 296 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDA 296 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT----------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC----------CcccCCCC-cCccChhhhcccccccccccccccCChhhhH
Confidence 999999999999999999999999998531 12334567 999999999887 89999999
Q ss_pred hhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 817 YSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 817 ~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
|||||++|||++|+.||...... . ....+... ...++..+.+++.+||+.||++||++.|++++
T Consensus 297 wSlG~il~elltg~~Pf~~~~~~----------~-~~~~~~~~----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 297 WALGLVIYWIWCADLPITKDAAL----------G-GSEWIFRS----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHHHHHHHSSCCC----------------C-CSGGGGSS----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHHHHHHHCCCCCcccccc----------c-chhhhhhh----ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99999999999999999643211 0 11111111 12345788999999999999999999999863
No 200
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2e-38 Score=346.25 Aligned_cols=252 Identities=21% Similarity=0.309 Sum_probs=191.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcH-HHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQ-NEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.++|+..+.||+|+||+||+|.+. +++.||||++.... .... +.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 356788899999999999999985 78999999997642 2222 33455556688889999999999999999999999
Q ss_pred EecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 701 EFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 701 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
||++ |+|.+++... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9996 5988887541 234599999999999999999999998 8 9999999999999999999999999997653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhh----ccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
... ......||+.|+|||++ .+..++.++||||+|+++|||++|+.||.................
T Consensus 162 ~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--- 230 (290)
T 3fme_A 162 DDV--------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP--- 230 (290)
T ss_dssp ----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC---
T ss_pred ccc--------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC---
Confidence 211 12234699999999996 456788899999999999999999999975443333222221111
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+..++..+.+++.+||+.||++|||++|++++
T Consensus 231 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 231 -----SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp -----CCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----CCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1111123456789999999999999999999999974
No 201
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.5e-38 Score=363.86 Aligned_cols=250 Identities=26% Similarity=0.389 Sum_probs=193.8
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--------hcHHHHHHHHHHHHccCCCCcceEEEEEEe
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--------QGQNEFLTEIKLLSRLHHRNLVSLLGYCDE 692 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 692 (958)
...++|...+.||+|+||+||+|.+. +++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 35678999999999999999999986 689999999865311 112348899999999999999999999864
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC---CCeEEee
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN---LNAKVAD 769 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~---~~~kl~D 769 (958)
+..++||||+++|+|.+++.... .+++.++..++.|+++||+|||+++ |+||||||+|||++.+ +.+||+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEee
Confidence 46899999999999999997543 4899999999999999999999999 9999999999999754 4599999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhcc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA 846 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~ 846 (958)
||+++.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............
T Consensus 286 FG~a~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i 357 (419)
T 3i6u_A 286 FGHSKILGE--------TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357 (419)
T ss_dssp SSTTTSCC-------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH
T ss_pred cccceecCC--------CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH
Confidence 999986532 112234679999999999864 567889999999999999999999997543211111111
Q ss_pred hhcCcchhhhcccCCCCC----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 847 RDSGMVFSIIDNRMGSYP----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
........ ..++..+.+++.+||+.||++||+++|++++
T Consensus 358 ----------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 ----------TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ----------HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ----------hcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 11111111 1346788999999999999999999999974
No 202
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=347.79 Aligned_cols=252 Identities=26% Similarity=0.407 Sum_probs=203.8
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
..+.|...+.||+|+||.||+|.+. +|+.||||++.... ..+++.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567888999999999999999986 58999999997643 34578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp CCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred cCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 999999999996432 34899999999999999999999999 9999999999999999999999999997653211
Q ss_pred CCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCC
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMG 861 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 861 (958)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||................. ...
T Consensus 180 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~ 245 (314)
T 3com_A 180 ------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP--------PTF 245 (314)
T ss_dssp ------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC--------CCC
T ss_pred ------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC--------ccc
Confidence 112234689999999999999999999999999999999999999976544332221111110 001
Q ss_pred CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 862 SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 862 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+..++..+.+++.+||+.||.+||++.+++++
T Consensus 246 ~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1234456789999999999999999999999874
No 203
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=9e-39 Score=351.25 Aligned_cols=267 Identities=24% Similarity=0.370 Sum_probs=190.7
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
..++|...+.||+|+||.||+|.+. +++.||||++.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 4567888999999999999999965 68999999986543 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhcc------CCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 701 EFVPNGTLRDWLSG------RTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 701 E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
||+++++|.+++.. .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999964 12345899999999999999999999999 9999999999999999999999999997
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
......... .........||+.|+|||++.+ ..++.++||||||+++|||++|+.||....................
T Consensus 170 ~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 170 FLATGGDIT--RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247 (303)
T ss_dssp HCC-----------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred eeccCCCcc--chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence 653322111 1112234569999999999976 5689999999999999999999999976544333222211111000
Q ss_pred hhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ..........++..+.+++.+||+.||++||+++|++++
T Consensus 248 ~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ET-GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cc-ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 000012223456788999999999999999999999974
No 204
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.4e-38 Score=354.71 Aligned_cols=259 Identities=27% Similarity=0.401 Sum_probs=202.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 46777889999999999999986 58999999986543 2334568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDD 781 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 781 (958)
|+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 105 FVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp CCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 999999998876443 3899999999999999999999999 9999999999999999999999999997543211
Q ss_pred CCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch-------
Q 002158 782 EGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF------- 853 (958)
Q Consensus 782 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~------- 853 (958)
.......||+.|+|||++.+. .++.++||||+|+++|||++|+.||................+...
T Consensus 179 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
T 4aaa_A 179 ------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF 252 (331)
T ss_dssp -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred ------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHh
Confidence 112334689999999999875 688999999999999999999999986654333222211111000
Q ss_pred -------hhhcccC-CC-----CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 -------SIIDNRM-GS-----YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 -------~~i~~~~-~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+.. .. ....++..+.+++.+||+.||++||+++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 00 012356789999999999999999999999874
No 205
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2e-38 Score=354.85 Aligned_cols=251 Identities=22% Similarity=0.366 Sum_probs=201.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHH-HHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKL-LSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.++|...+.||+|+||+||+|.+. +|+.||||++.... .....++..|..+ ++.++||||+++++++..++..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 346777889999999999999975 78999999997642 2334556666665 77889999999999999999999999
Q ss_pred EecCCCCHHHHhccC--CCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 701 EFVPNGTLRDWLSGR--TKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 701 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
||+++ +|.+++... ....+++..+..++.|+++||+|||++ + |+||||||+|||++.++.+||+|||+++...
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99974 999988642 334599999999999999999999987 8 9999999999999999999999999997652
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhcc----CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+.....
T Consensus 206 ~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~----- 272 (340)
T 3an0_A 206 D--------SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----- 272 (340)
T ss_dssp C--------HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-----
T ss_pred c--------ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhc-----
Confidence 1 111223469999999999743 46888999999999999999999999764332222222111
Q ss_pred hhhcccCCCC-ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SIIDNRMGSY-PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... +..++..+.+++.+||+.||++||++.|++++
T Consensus 273 ----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 273 ----EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ----SCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----CCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111111 23457889999999999999999999999974
No 206
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.7e-38 Score=368.64 Aligned_cols=265 Identities=23% Similarity=0.327 Sum_probs=187.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC-----CeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE-----GEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 696 (958)
++|...+.||+|+||+||+|.+. +++.||||++... .....+++.+|++++++++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57888999999999999999976 6899999998653 334457899999999999999999999999443 578
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
|+||||+ +++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEecc-ccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 9999998 579999997543 4999999999999999999999999 999999999999999999999999999876
Q ss_pred ccCCCCCCc--------------------cceeeeeccCCCCccChhhh-ccCCCCCcchhhhHHHHHHHHHh-------
Q 002158 777 PVLDDEGTM--------------------PTHVSTIVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVLLELLT------- 828 (958)
Q Consensus 777 ~~~~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~S~Gv~l~ellt------- 828 (958)
......... .........||+.|+|||++ ....++.++|||||||++|||++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~ 286 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence 432211000 01123456789999999987 45679999999999999999999
Q ss_pred ----CCCCCCCCchh-------------------HHHHHH-HhhcCcc-h------------hhhc---c----cCCCCC
Q 002158 829 ----GMQPISHGKNI-------------------VREVNV-ARDSGMV-F------------SIID---N----RMGSYP 864 (958)
Q Consensus 829 ----G~~P~~~~~~~-------------------~~~~~~-~~~~~~~-~------------~~i~---~----~~~~~~ 864 (958)
|+.+|.+.... ...+.. ....+.. . ..+. . .+....
T Consensus 287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (458)
T 3rp9_A 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366 (458)
T ss_dssp SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence 55555432210 000000 0000000 0 0000 0 000111
Q ss_pred hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 865 SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 865 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...+..+.+|+.+||..||++|||++|++++
T Consensus 367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 367 PASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 2346778999999999999999999999985
No 207
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-38 Score=359.40 Aligned_cols=259 Identities=21% Similarity=0.305 Sum_probs=199.3
Q ss_pred HHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------
Q 002158 621 AMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------ 693 (958)
Q Consensus 621 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 693 (958)
+....+|...+.||+|+||+||+|.+. +|+.||||++...... ..+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345668889999999999999999975 7899999998754322 23799999999999999999998443
Q ss_pred --------------------------------CeEEEEEEecCCCCHHHHhcc--CCCCCchHHHHHHHHHHHHHHHHHh
Q 002158 694 --------------------------------GEQMLVYEFVPNGTLRDWLSG--RTKENLNFAMRLRVALDSAKGILYL 739 (958)
Q Consensus 694 --------------------------------~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yL 739 (958)
...++||||++ |+|.+.+.. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999997 588877753 2234599999999999999999999
Q ss_pred hhcCCCCeeccCCCccceEec-CCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhh
Q 002158 740 HTEAHPPVFHRDIKASNILLD-SNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVY 817 (958)
Q Consensus 740 H~~~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~ 817 (958)
|+.+ |+||||||+|||++ .++.+||+|||+++...... ......||+.|+|||++.+. .++.++|||
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 226 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--------PSVAYICSRFYRAPELMLGATEYTPSIDLW 226 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--------CCCCCCCCSSCCCHHHHTTCSSCCTHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--------CCcCcccCCCccCHHHhcCCCCCCcchhhh
Confidence 9999 99999999999998 68899999999998653222 12234689999999998875 489999999
Q ss_pred hHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc--hhhh--cc--------cC------CCCChHHHHHHHHHHHHcc
Q 002158 818 SLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV--FSII--DN--------RM------GSYPSECVERFVTLALRCC 879 (958)
Q Consensus 818 S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~--~~~i--~~--------~~------~~~~~~~~~~l~~li~~cl 879 (958)
|+||++|||++|+.||.+..............+.. ..+. .. .. ..++...+..+.+++.+||
T Consensus 227 slG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 306 (383)
T 3eb0_A 227 SIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306 (383)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC
T ss_pred hHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc
Confidence 99999999999999998765443333222111110 0000 00 00 0123446678999999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 002158 880 HDKPEHRPSMSDVVRE 895 (958)
Q Consensus 880 ~~dP~~RPs~~evl~~ 895 (958)
+.||++|||+.|++++
T Consensus 307 ~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 307 RYEPDLRINPYEAMAH 322 (383)
T ss_dssp CSSGGGSCCHHHHHTS
T ss_pred cCChhhCCCHHHHhcC
Confidence 9999999999999964
No 208
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.2e-37 Score=347.89 Aligned_cols=256 Identities=22% Similarity=0.329 Sum_probs=205.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEE-C-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCC------CcceEEEEEEeCCeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGIL-S-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHR------NLVSLLGYCDEEGEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~------niv~l~~~~~~~~~~ 696 (958)
++|...+.||+|+||+||+|.+ . +++.||||+++.. ....+.+.+|+++++.++|+ +++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4678889999999999999997 3 6889999999753 34456788999999998665 499999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---------------
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS--------------- 761 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~--------------- 761 (958)
++||||+ +++|.+++.......+++.++..++.|+++||+|||+++ |+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999 899999998776566899999999999999999999999 999999999999987
Q ss_pred ----CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc
Q 002158 762 ----NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK 837 (958)
Q Consensus 762 ----~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~ 837 (958)
++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDE----------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp EEESCCCEEECCCSSCEETTS----------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred ccccCCCceEeeCcccccCcc----------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 66899999999975421 1123468999999999999999999999999999999999999997654
Q ss_pred hhHHHHHHHhhcCcc-hhhh------------------------------c--ccCCCCChHHHHHHHHHHHHccccCCC
Q 002158 838 NIVREVNVARDSGMV-FSII------------------------------D--NRMGSYPSECVERFVTLALRCCHDKPE 884 (958)
Q Consensus 838 ~~~~~~~~~~~~~~~-~~~i------------------------------~--~~~~~~~~~~~~~l~~li~~cl~~dP~ 884 (958)
............+.. ...+ . ......+...++.+.+++.+||+.||+
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 322211111100000 0000 0 001122446778899999999999999
Q ss_pred CCCCHHHHHHH
Q 002158 885 HRPSMSDVVRE 895 (958)
Q Consensus 885 ~RPs~~evl~~ 895 (958)
+|||++|++++
T Consensus 319 ~Rpt~~ell~h 329 (339)
T 1z57_A 319 KRITLREALKH 329 (339)
T ss_dssp TSCCHHHHTTS
T ss_pred cccCHHHHhcC
Confidence 99999999864
No 209
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.1e-38 Score=357.87 Aligned_cols=267 Identities=22% Similarity=0.270 Sum_probs=203.3
Q ss_pred ChHHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCCh-----------hcHHHHHHHHHHHHccCCCCcc
Q 002158 616 KFKELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSL-----------QGQNEFLTEIKLLSRLHHRNLV 684 (958)
Q Consensus 616 ~~~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~H~niv 684 (958)
.++++....++|...+.||+|+||.||+|.+.+|+.||||++..... ...+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45678888899999999999999999999988899999998854221 1236799999999999999999
Q ss_pred eEEEEEEe-----CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 685 SLLGYCDE-----EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 685 ~l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
++++++.. ....++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEE
Confidence 99999854 336899999997 68988887543 45899999999999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCch
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKN 838 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~ 838 (958)
+.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD--------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp CTTCCEEECCTTC-----------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cCCCCEEEEecCcccccccc--------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999743221 12234568999999999987 6789999999999999999999999976543
Q ss_pred hHHHHHHHhhcC--cc-----------hhhhcccCCC--------CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 839 IVREVNVARDSG--MV-----------FSIIDNRMGS--------YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 839 ~~~~~~~~~~~~--~~-----------~~~i~~~~~~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...........+ .. ...+...... .+...+..+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 222211111000 00 0001011110 122345678999999999999999999999974
No 210
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=9.8e-38 Score=342.28 Aligned_cols=251 Identities=24% Similarity=0.351 Sum_probs=204.4
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---------hhcHHHHHHHHHHHHccC-CCCcceEEEEEEe
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---------LQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDE 692 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 692 (958)
.++|...+.||+|+||.||+|.++ +++.||||++.... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 357888899999999999999986 68999999987543 122356889999999995 9999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeee
Q 002158 693 EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGL 772 (958)
Q Consensus 693 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 772 (958)
.+..++||||+++++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999997543 4899999999999999999999999 99999999999999999999999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhc------cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA 846 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~ 846 (958)
++...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||......... ...
T Consensus 171 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~ 241 (298)
T 1phk_A 171 SCQLDPGE--------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML-RMI 241 (298)
T ss_dssp CEECCTTC--------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHH
T ss_pred hhhcCCCc--------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH-HHH
Confidence 97653211 122346899999999985 456788999999999999999999999765432221 111
Q ss_pred hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 847 RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
....... .......++..+.+++.+||+.||++||+++|+++
T Consensus 242 ~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 242 MSGNYQF------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHTCCCC------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred hcCCccc------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1111000 00112346678999999999999999999999986
No 211
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.6e-38 Score=347.68 Aligned_cols=252 Identities=18% Similarity=0.307 Sum_probs=201.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEe--CCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDE--EGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lV~ 700 (958)
++|+..+.||+|+||+||+|.+. +++.||||++.... .+.+.+|++++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 46788899999999999999975 78999999997533 467889999999997 9999999999987 66789999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC-CeEEeeeeeecccccC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL-NAKVADFGLSRLAPVL 779 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~~~~ 779 (958)
||+++++|.+++.. +++.++..++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999853 788999999999999999999999 99999999999999777 8999999999865322
Q ss_pred CCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh---cCcchhh
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD---SGMVFSI 855 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~---~~~~~~~ 855 (958)
.. .....||..|+|||++.+ ..++.++|||||||++|||++|+.||..+............ .....+.
T Consensus 185 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (330)
T 3nsz_A 185 QE--------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256 (330)
T ss_dssp CC--------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHH
T ss_pred Cc--------cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhH
Confidence 11 223468999999999987 67899999999999999999999999655433222211100 0000011
Q ss_pred hcccC------------------------CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRM------------------------GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
++... ...+...+..+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 10000 11122356889999999999999999999999974
No 212
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.3e-38 Score=361.57 Aligned_cols=203 Identities=27% Similarity=0.377 Sum_probs=166.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC-----CeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE-----GEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 696 (958)
++|...+.||+|+||+||+|.+. +++.||||++... .....+++.+|++++++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 47888899999999999999986 6889999999763 334456899999999999999999999999766 578
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
|+||||++ ++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 106 ~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 99999995 6999999754 34899999999999999999999999 999999999999999999999999999876
Q ss_pred ccCCCCCCc---------------cceeeeeccCCCCccChhhh-ccCCCCCcchhhhHHHHHHHHHhCCCCC
Q 002158 777 PVLDDEGTM---------------PTHVSTIVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVLLELLTGMQPI 833 (958)
Q Consensus 777 ~~~~~~~~~---------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~S~Gv~l~elltG~~P~ 833 (958)
......... .........||+.|+|||++ ....++.++||||+||++|||++|..||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 432211000 00123456799999999986 4566999999999999999999864444
No 213
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.8e-38 Score=368.48 Aligned_cols=251 Identities=25% Similarity=0.376 Sum_probs=200.2
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+.|...+.||+|+||+||+|+++ ++..||||++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 446888899999999999999986 68899999987643 233567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEeeeeeecccc
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVADFGLSRLAP 777 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~DFGla~~~~ 777 (958)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999986543 4899999999999999999999999 999999999999976 4559999999998653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... ......||+.|+|||++. ..++.++||||+||++|||++|..||...... .............. .
T Consensus 191 ~~~--------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~--~ 258 (494)
T 3lij_A 191 NQK--------KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFD--S 258 (494)
T ss_dssp TTB--------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCC--S
T ss_pred CCc--------cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCC--c
Confidence 211 123356999999999986 56899999999999999999999999764432 22222111111000 0
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+ ....++..+.+++.+||+.||.+|||+.|++++
T Consensus 259 ~----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 259 P----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp G----GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred h----hcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0 012346778999999999999999999999975
No 214
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4e-38 Score=369.84 Aligned_cols=251 Identities=25% Similarity=0.372 Sum_probs=206.7
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
.++|...+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 456888899999999999999986 78999999986542 33467899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe---cCCCCeEEeeeeeeccc
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL---DSNLNAKVADFGLSRLA 776 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl---~~~~~~kl~DFGla~~~ 776 (958)
|||+.+|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 99999999999997543 4899999999999999999999999 9999999999999 56789999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
.... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||....... .............
T Consensus 180 ~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~-- 247 (484)
T 3nyv_A 180 EASK--------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-ILKKVEKGKYTFE-- 247 (484)
T ss_dssp CCCC--------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCC--
T ss_pred cccc--------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCC--
Confidence 3211 1234569999999999866 68999999999999999999999997654322 2222211111000
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......++..+.+++.+||+.||.+|||++|++++
T Consensus 248 ----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 ----LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ----SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00113456789999999999999999999999975
No 215
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.4e-38 Score=351.86 Aligned_cols=263 Identities=24% Similarity=0.356 Sum_probs=201.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--hcHHHHHHHHHHHHccCCCCcceEEEEEEe--------C
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--QGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--------E 693 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------~ 693 (958)
.+|...+.||+|+||+||+|++. +|+.||||++..... .....+.+|+++++.++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 46788899999999999999985 789999999865432 224578899999999999999999999977 4
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLS 773 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 773 (958)
+..++||||++ ++|.+.+.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 97 GSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 46899999996 58888876543 34999999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc
Q 002158 774 RLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV 852 (958)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~ 852 (958)
+......... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||................+..
T Consensus 172 ~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 248 (351)
T 3mi9_A 172 RAFSLAKNSQ---PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248 (351)
T ss_dssp EECCCCSSSS---CCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred cccccccccc---ccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 8664322211 122234568999999999976 457999999999999999999999998655432222211111110
Q ss_pred h----hhhcc-----cC----C---CCChH-----HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 F----SIIDN-----RM----G---SYPSE-----CVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 ~----~~i~~-----~~----~---~~~~~-----~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ...+. .. . ..... .+..+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0 00000 00 0 00000 13568899999999999999999999974
No 216
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.8e-38 Score=347.32 Aligned_cols=261 Identities=25% Similarity=0.368 Sum_probs=204.7
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC--CCcEEEEEEeccCC--hhcHHHHHHHHHHHHcc---CCCCcceEEEEEE----
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS--DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRL---HHRNLVSLLGYCD---- 691 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~---- 691 (958)
..++|...+.||+|+||+||+|.+. +++.||||++.... ......+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3467888999999999999999983 68899999886432 12223566788777766 8999999999987
Q ss_pred -eCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeee
Q 002158 692 -EEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADF 770 (958)
Q Consensus 692 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DF 770 (958)
.....++||||++ |+|.+++.......+++.++..++.|+++||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999997 69999998766566999999999999999999999999 999999999999999999999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
|+++..... .......||..|+|||++.+..++.++||||||+++|||++|+.||................+
T Consensus 165 g~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 236 (326)
T 1blx_A 165 GLARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236 (326)
T ss_dssp CSCCCCCGG--------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred cccccccCC--------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcC
Confidence 999764321 112345689999999999999999999999999999999999999986554332222111100
Q ss_pred cc--hh----------hh----cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 851 MV--FS----------II----DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 851 ~~--~~----------~i----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. .. .. ..........++..+.+++.+||+.||++||++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 00 00 000111234466788999999999999999999999863
No 217
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.6e-38 Score=367.94 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=204.3
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
..++|...+.||+|+||+||+|.+. +++.||||++... .......+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3457888999999999999999986 7899999998643 223456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec---CCCCeEEeeeeeeccc
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD---SNLNAKVADFGLSRLA 776 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~---~~~~~kl~DFGla~~~ 776 (958)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999987543 4899999999999999999999999 99999999999995 4567999999999765
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
... .......||+.|+|||++.+ .++.++||||+||++|||++|+.||....... .............
T Consensus 175 ~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~-- 242 (486)
T 3mwu_A 175 QQN--------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFD-- 242 (486)
T ss_dssp CCC------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCSC--
T ss_pred CCC--------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCC--
Confidence 321 11234569999999999875 58999999999999999999999997654322 2221111111000
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......++..+.+++.+||+.||.+|||+.|++++
T Consensus 243 ----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 ----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ----SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ----CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00113456788999999999999999999999986
No 218
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1e-37 Score=356.78 Aligned_cols=256 Identities=22% Similarity=0.283 Sum_probs=202.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC--------CCCcceEEEEEE----
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH--------HRNLVSLLGYCD---- 691 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~---- 691 (958)
.+|...+.||+|+||+||+|++. +++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 56888899999999999999975 6889999999753 344567899999999985 788999999987
Q ss_pred eCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCC-------
Q 002158 692 EEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNL------- 763 (958)
Q Consensus 692 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~------- 763 (958)
.....++||||+ +++|.+++.......+++..+..++.|++.||+|||++ + |+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhh
Confidence 456889999999 67777777655555699999999999999999999998 8 99999999999999775
Q ss_pred ------------------------------------------CeEEeeeeeecccccCCCCCCccceeeeeccCCCCccC
Q 002158 764 ------------------------------------------NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLD 801 (958)
Q Consensus 764 ------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a 801 (958)
.+||+|||+++..... .....||+.|+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----------~~~~~gt~~y~a 261 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----------FTEDIQTRQYRS 261 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----------SCSCCSCGGGCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----------CccCCCCCcccC
Confidence 7999999999865321 123468999999
Q ss_pred hhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch------hHHHHHHHhhcCcc-hhhh----------c-------
Q 002158 802 PEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN------IVREVNVARDSGMV-FSII----------D------- 857 (958)
Q Consensus 802 PE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~------~~~~~~~~~~~~~~-~~~i----------~------- 857 (958)
||++.+..++.++|||||||++|||++|+.||..... ...........+.. ...+ .
T Consensus 262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1wak_A 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341 (397)
T ss_dssp HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence 9999999999999999999999999999999964321 11110000000000 0000 0
Q ss_pred -------------ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 858 -------------NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 858 -------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+...+..+.+++.+||+.||++|||++|++++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00113456788899999999999999999999999864
No 219
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.6e-37 Score=366.22 Aligned_cols=251 Identities=26% Similarity=0.366 Sum_probs=201.8
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-------------hcHHHHHHHHHHHHccCCCCcceEEEE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-------------QGQNEFLTEIKLLSRLHHRNLVSLLGY 689 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~~~ 689 (958)
.++|...+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888899999999999999986 588999999875421 234678999999999999999999999
Q ss_pred EEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCC---CeE
Q 002158 690 CDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNL---NAK 766 (958)
Q Consensus 690 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~---~~k 766 (958)
+.+.+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999997543 4899999999999999999999999 99999999999998776 699
Q ss_pred EeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002158 767 VADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVA 846 (958)
Q Consensus 767 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~ 846 (958)
|+|||+++...... ......||+.|+|||++. ..++.++||||+||++|||++|..||...... ......
T Consensus 190 l~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i 259 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--------KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIKKV 259 (504)
T ss_dssp ECCCTTCEECCTTS--------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH
T ss_pred EEECCCCEEcCCCC--------ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 99999998653211 123356999999999986 56899999999999999999999999754432 222222
Q ss_pred hhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 847 RDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 847 ~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......... .. ...++..+.+++.+||+.||.+|||++|++++
T Consensus 260 ~~~~~~~~~--~~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 EKGKYYFDF--ND----WKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHCCCCCCH--HH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCCCCc--cc----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111110000 00 02345788999999999999999999999975
No 220
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.9e-38 Score=355.50 Aligned_cols=254 Identities=22% Similarity=0.335 Sum_probs=186.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------Ce
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------GE 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~ 695 (958)
++|...+.||+|+||.||+|.+. +|+.||||++... .....+++.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 57888899999999999999975 6899999998753 334456789999999999999999999998654 56
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 79999999 7899999865 34899999999999999999999999 99999999999999999999999999985
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-h
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV-F 853 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~-~ 853 (958)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..............+.. .
T Consensus 182 ~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~ 251 (367)
T 2fst_X 182 TAD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251 (367)
T ss_dssp -------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred ccc----------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 421 1234569999999999987 678999999999999999999999997655433222211111100 0
Q ss_pred hhhc-----------ccCC---CC-----ChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SIID-----------NRMG---SY-----PSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~-----------~~~~---~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+.+. ..+. .. ....+..+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 0000 00 11235678999999999999999999999975
No 221
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.3e-37 Score=345.57 Aligned_cols=253 Identities=26% Similarity=0.387 Sum_probs=197.1
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh--------hcHHHHHHHHHHHHccCCCCcceEEEEEEeC
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL--------QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE 693 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 693 (958)
..++|...+.||+|+||.||+|.+. +++.||||++..... .....+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3457888999999999999999986 588999999865321 1223588999999999999999999999766
Q ss_pred CeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC---eEEeee
Q 002158 694 GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN---AKVADF 770 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~---~kl~DF 770 (958)
+ .++||||+++++|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+||+++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccC
Confidence 5 899999999999999997543 4899999999999999999999999 999999999999987664 999999
Q ss_pred eeecccccCCCCCCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 771 GLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 771 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
|+++.... ........||+.|+|||++. ...++.++||||||+++|||++|..||..............
T Consensus 162 g~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 233 (322)
T 2ycf_A 162 GHSKILGE--------TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233 (322)
T ss_dssp TTCEECCC--------CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH
T ss_pred ccceeccc--------ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH
Confidence 99986421 11123456999999999974 46688999999999999999999999975332111111111
Q ss_pred hcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 848 DSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 848 ~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..... . .......++..+.+++.+||+.||++||+++|++++
T Consensus 234 ~~~~~--~----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 SGKYN--F----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HTCCC--C----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hCccc--c----CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 10000 0 000012345788999999999999999999999863
No 222
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=346.69 Aligned_cols=260 Identities=23% Similarity=0.324 Sum_probs=197.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEE------------
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCD------------ 691 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~------------ 691 (958)
.+|...+.||+|+||.||+|.+. +++.||||++........+++.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 46778899999999999999987 48999999998777667788999999999999999999999874
Q ss_pred --eCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-CCCCeEEe
Q 002158 692 --EEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD-SNLNAKVA 768 (958)
Q Consensus 692 --~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~-~~~~~kl~ 768 (958)
.....++||||++ |+|.+++... .+++..+..++.|+++||+|||+++ |+||||||+||+++ +++.+||+
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 6999999643 4889999999999999999999999 99999999999997 56799999
Q ss_pred eeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002158 769 DFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVAR 847 (958)
Q Consensus 769 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~ 847 (958)
|||+++........ ........||..|+|||++.+ ..++.++||||||+++|||++|+.||..............
T Consensus 164 Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 239 (320)
T 2i6l_A 164 DFGLARIMDPHYSH----KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239 (320)
T ss_dssp CCTTCBCC------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred cCccccccCCCccc----ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999865322111 111233468999999999876 6788999999999999999999999986554332221111
Q ss_pred hcCcch------------hhhcccC--C-----CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 848 DSGMVF------------SIIDNRM--G-----SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 848 ~~~~~~------------~~i~~~~--~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... ..+.... . .....++..+.+++.+||+.||++||+++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 111000 0000000 0 0112356789999999999999999999999975
No 223
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.2e-37 Score=376.67 Aligned_cols=260 Identities=27% Similarity=0.434 Sum_probs=210.6
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEECC----CcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILSD----NTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
...++|...+.||+|+||+||+|.+.. +..||||++... .....+.|.+|+.++++++||||+++++++. ++..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 344678888999999999999999742 467999998764 3344567999999999999999999999985 4578
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++|+|.++++... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 99999999999999997543 34899999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
.... ........||+.|+|||++.+..++.++||||||+++|||++ |..||.+...... .....
T Consensus 542 ~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-~~~i~-------- 606 (656)
T 2j0j_A 542 EDST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGRIE-------- 606 (656)
T ss_dssp CC----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHHH--------
T ss_pred CCCc------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHH--------
Confidence 3211 111223457889999999999999999999999999999997 9999975443221 11111
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
.......+..++..+.+++.+||+.||++||++.++++.|+++++.
T Consensus 607 -~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 607 -NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp -HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 1122234566778999999999999999999999999999998753
No 224
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-38 Score=383.30 Aligned_cols=250 Identities=21% Similarity=0.305 Sum_probs=208.5
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC---hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQM 697 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 697 (958)
..++|...+.||+|+||+||+|.++ +++.||||+++... ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3457888899999999999999986 68899999987531 22345688999999988 7999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||+++|+|.++++... .+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999997654 4899999999999999999999999 9999999999999999999999999998532
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhc
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIID 857 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~ 857 (958)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... .
T Consensus 494 ~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-~~~~~i----------~ 555 (674)
T 3pfq_A 494 WDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSI----------M 555 (674)
T ss_dssp CTT-------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH----------H
T ss_pred cCC-------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-HHHHHH----------H
Confidence 211 1234567999999999999999999999999999999999999999764432 222111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 002158 858 NRMGSYPSECVERFVTLALRCCHDKPEHRPSM-----SDVVRE 895 (958)
Q Consensus 858 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 895 (958)
.....+|...+.++.+++.+||+.||++||++ +||.++
T Consensus 556 ~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 556 EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp SSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred hCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 12234566677889999999999999999997 666653
No 225
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.3e-38 Score=355.46 Aligned_cols=258 Identities=21% Similarity=0.341 Sum_probs=206.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhc-----------------HHHHHHHHHHHHccCCCCcceEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQG-----------------QNEFLTEIKLLSRLHHRNLVSLL 687 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l~ 687 (958)
++|...+.||+|+||.||+|.+ +++.||||++....... .+.+.+|++++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4788889999999999999999 99999999986532111 16899999999999999999999
Q ss_pred EEEEeCCeEEEEEEecCCCCHHHH------hccCCCCCchHHHHHHHHHHHHHHHHHhhh-cCCCCeeccCCCccceEec
Q 002158 688 GYCDEEGEQMLVYEFVPNGTLRDW------LSGRTKENLNFAMRLRVALDSAKGILYLHT-EAHPPVFHRDIKASNILLD 760 (958)
Q Consensus 688 ~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dikp~NILl~ 760 (958)
+++.+.+..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ .+ |+||||||+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEc
Confidence 999999999999999999999999 665445669999999999999999999999 88 99999999999999
Q ss_pred CCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCC-cchhhhHHHHHHHHHhCCCCCCCCch
Q 002158 761 SNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTD-KSDVYSLGVVLLELLTGMQPISHGKN 838 (958)
Q Consensus 761 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DV~S~Gv~l~elltG~~P~~~~~~ 838 (958)
.++.+||+|||+++..... ......||+.|+|||++.+. .++. ++||||||+++|||++|+.||.....
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 257 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred CCCcEEEeccccccccccc---------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 9999999999999864321 22345699999999999887 6666 99999999999999999999976544
Q ss_pred hHHHHHHHhhcCcchhhhc---------ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 839 IVREVNVARDSGMVFSIID---------NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
................... .........++..+.+++.+||+.||.+||+++|++++
T Consensus 258 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 258 LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp SHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2333222221111000000 00000113456789999999999999999999999973
No 226
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-37 Score=351.58 Aligned_cols=260 Identities=22% Similarity=0.312 Sum_probs=202.6
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC-----CeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE-----GEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~ 697 (958)
.+|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 46888899999999999999976 68899999997543 33446799999999999999999999999765 4689
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||++ |+|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 107 iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 9999996 6999999754 3899999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-hhh
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV-FSI 855 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~-~~~ 855 (958)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||................+.. .+.
T Consensus 180 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 180 PDHDHT----GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp GGGCBC----CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred CCCCcc----ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 322111 112335799999999987654 58999999999999999999999997654332222111100000 000
Q ss_pred h------------c--ccCCC-----CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 I------------D--NRMGS-----YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i------------~--~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+ . ..... .....+..+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0 00000 112345678999999999999999999999974
No 227
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=353.09 Aligned_cols=265 Identities=23% Similarity=0.333 Sum_probs=202.3
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV 699 (958)
...++|...+.||+|+||.||+|.+++ .||+|++.... ....+.|.+|+.++++++||||+++++++...+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345678888999999999999999854 49999986532 22334678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccC
Q 002158 700 YEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVL 779 (958)
Q Consensus 700 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 779 (958)
|||+++++|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+||+++ ++.+||+|||+++.....
T Consensus 108 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred eecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 99999999999997543 35899999999999999999999999 99999999999998 689999999998754322
Q ss_pred CCCCCccceeeeeccCCCCccChhhhcc---------CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC
Q 002158 780 DDEGTMPTHVSTIVKGTPGYLDPEYFLT---------HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG 850 (958)
Q Consensus 780 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~ 850 (958)
.... .........||+.|+|||++.. ..++.++||||||+++|||++|+.||......... ..... +
T Consensus 183 ~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~-~ 258 (319)
T 2y4i_B 183 QAGR--REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII-WQMGT-G 258 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH-HHHHT-T
T ss_pred cccc--cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHhcc-C
Confidence 1111 1112233458999999999975 34788999999999999999999999754432211 11111 1
Q ss_pred cchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhhCC
Q 002158 851 MVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKMFP 904 (958)
Q Consensus 851 ~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 904 (958)
.. . ...+..++..+.+++.+||+.||++||+++++++.|+++.+...
T Consensus 259 ~~-----~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 259 MK-----P--NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp CC-----C--CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred CC-----C--CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00 0 11122345678999999999999999999999999998776543
No 228
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.6e-37 Score=349.40 Aligned_cols=258 Identities=22% Similarity=0.267 Sum_probs=202.9
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CC-----CcceEEEEEEeCCe
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HR-----NLVSLLGYCDEEGE 695 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~ 695 (958)
..++|...+.||+|+||+||+|.+. +++.||||+++.. .....++..|+++++.++ |+ +++++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3568888999999999999999986 6889999999753 333566788999998885 55 49999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhh--cCCCCeeccCCCccceEec--CCCCeEEeeee
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHT--EAHPPVFHRDIKASNILLD--SNLNAKVADFG 771 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~--~~~~~iiH~Dikp~NILl~--~~~~~kl~DFG 771 (958)
.++||||++ ++|.+++.......+++..+..++.|++.||+|||+ .+ |+||||||+|||++ .++.+||+|||
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEEecc
Confidence 999999995 699999987665569999999999999999999995 45 99999999999994 47889999999
Q ss_pred eecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCc
Q 002158 772 LSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGM 851 (958)
Q Consensus 772 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~ 851 (958)
+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||................+.
T Consensus 207 ~a~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 276 (382)
T 2vx3_A 207 SSCQLGQ----------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI 276 (382)
T ss_dssp TCEETTC----------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred Cceeccc----------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9986521 112356899999999999999999999999999999999999999865543222211111110
Q ss_pred chh-----------hhccc------------------------------------------CCCCChHHHHHHHHHHHHc
Q 002158 852 VFS-----------IIDNR------------------------------------------MGSYPSECVERFVTLALRC 878 (958)
Q Consensus 852 ~~~-----------~i~~~------------------------------------------~~~~~~~~~~~l~~li~~c 878 (958)
... ..... ...........+.+++.+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 356 (382)
T 2vx3_A 277 PPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRM 356 (382)
T ss_dssp CCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHh
Confidence 000 00000 0001123446889999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 002158 879 CHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 879 l~~dP~~RPs~~evl~~ 895 (958)
|+.||++|||++|++++
T Consensus 357 L~~dP~~Rpta~e~L~h 373 (382)
T 2vx3_A 357 LDYDPKTRIQPYYALQH 373 (382)
T ss_dssp TCSCTTTSCCHHHHTTS
T ss_pred cCCChhhCCCHHHHhcC
Confidence 99999999999999864
No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.4e-37 Score=339.66 Aligned_cols=258 Identities=24% Similarity=0.366 Sum_probs=197.0
Q ss_pred HcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe----------
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE---------- 692 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------- 692 (958)
.++|+..+.||+|+||.||+|+.. +++.||||++.. .....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 456888899999999999999985 789999999865 23445678999999999999999999998865
Q ss_pred ---CCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEee
Q 002158 693 ---EGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVAD 769 (958)
Q Consensus 693 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~D 769 (958)
.+..++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEee
Confidence 356899999999999999997543 34788999999999999999999999 99999999999999999999999
Q ss_pred eeeecccccCCCCC-------CccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHH
Q 002158 770 FGLSRLAPVLDDEG-------TMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVR 841 (958)
Q Consensus 770 FGla~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~ 841 (958)
||+++......... ...........||+.|+|||++.+. .++.++||||||+++|||++ ||........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 99998653211100 0001122345699999999999864 68999999999999999998 5643322222
Q ss_pred HHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 842 EVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 842 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......... .......+...+..+.+++.+||+.||.+||++++++++
T Consensus 237 ~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 237 ILKKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 222111100 011123345566788999999999999999999999974
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2e-37 Score=350.92 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=198.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE-----
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ----- 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~----- 696 (958)
++|...+.||+|+||+||+|.+. +|+.||||++.... ....+++.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 46777889999999999999976 68999999997642 33356789999999999999999999999877654
Q ss_pred -EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 697 -MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 697 -~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
++||||++ ++|.+++.. .+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 122 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 789888842 3899999999999999999999999 99999999999999999999999999975
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||................+....
T Consensus 194 ~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 263 (371)
T 4exu_A 194 ADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGT 263 (371)
T ss_dssp ----------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred ccc----------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcH
Confidence 421 1234568999999999987 67899999999999999999999999765533322222111111000
Q ss_pred -hh-----------cccCC--------CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 -II-----------DNRMG--------SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 -~i-----------~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.. ..... .....++..+.+++.+||+.||++|||++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 264 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 00000 0112346789999999999999999999999974
No 231
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.1e-37 Score=358.53 Aligned_cols=254 Identities=23% Similarity=0.325 Sum_probs=195.0
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeC------CeEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE------GEQML 698 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~l 698 (958)
.|...+.||+|+||+||+|++. +++.||||++..... .+.+|++++++++||||+++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 5777889999999999999986 689999999875422 234799999999999999999998542 23679
Q ss_pred EEEecCCCCHHHHhcc--CCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-CCeEEeeeeeecc
Q 002158 699 VYEFVPNGTLRDWLSG--RTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-LNAKVADFGLSRL 775 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla~~ 775 (958)
||||+++ ++.+.+.. .....+++..+..++.|+++||+|||+++ |+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999975 77766643 22345999999999999999999999999 9999999999999965 5689999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-h
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV-F 853 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~-~ 853 (958)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+..............+.. .
T Consensus 207 ~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~ 278 (420)
T 1j1b_A 207 LVRGE--------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278 (420)
T ss_dssp CCTTC--------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCH
T ss_pred cccCC--------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 53221 11235689999999999765 78999999999999999999999998665433332222111100 0
Q ss_pred h---hhccc-----CCC---------CChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 S---IIDNR-----MGS---------YPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~---~i~~~-----~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+ ..... .+. ++...+.++.+|+.+||+.||++||++.|++++
T Consensus 279 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0 00000 000 123456789999999999999999999999975
No 232
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-37 Score=343.44 Aligned_cols=256 Identities=23% Similarity=0.352 Sum_probs=201.6
Q ss_pred HHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccC--ChhcHHHHHHHHHHHHccC--CCCcceEEEEEEeCCe
Q 002158 620 LAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLH--HRNLVSLLGYCDEEGE 695 (958)
Q Consensus 620 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~ 695 (958)
+....++|...+.||+|+||.||+|.+.+++.||||++... .....+.+.+|++++++++ |+||+++++++..++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 33445678888999999999999999988999999998653 3344567999999999997 5999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||| +.+++|.+++.... .+++.++..++.|+++||+|||+.+ |+||||||+||+++ ++.+||+|||+++.
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEEEEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEE-CCeEEEeecccccc
Confidence 999999 55889999997654 4899999999999999999999999 99999999999996 48999999999986
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc-----------CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVN 844 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~ 844 (958)
...... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||...........
T Consensus 176 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 250 (313)
T 3cek_A 176 MQPDTT-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250 (313)
T ss_dssp -------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred ccCccc-----cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 532211 111234569999999999875 4678899999999999999999999976543322222
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
...... .....+...+..+.+++.+||+.||++||+++|++++
T Consensus 251 ~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 251 AIIDPN--------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHCTT--------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhcc--------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 211111 1122334446789999999999999999999999975
No 233
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.1e-38 Score=356.66 Aligned_cols=253 Identities=10% Similarity=0.007 Sum_probs=182.7
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHcc--CCCCcceEE-------EEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRL--HHRNLVSLL-------GYCD 691 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~~ 691 (958)
..|...+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 34777889999999999999986 789999999987543 2345677885544444 699988755 5554
Q ss_pred eC-----------------CeEEEEEEecCCCCHHHHhccCCCCCchHHHH------HHHHHHHHHHHHHhhhcCCCCee
Q 002158 692 EE-----------------GEQMLVYEFVPNGTLRDWLSGRTKENLNFAMR------LRVALDSAKGILYLHTEAHPPVF 748 (958)
Q Consensus 692 ~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~aL~yLH~~~~~~ii 748 (958)
.. ...++||||++ |+|.+++..... .+.+..+ ..++.|+++||+|||+++ |+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSKG---LV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence 33 23799999998 899999976422 2455555 788899999999999999 99
Q ss_pred ccCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHH
Q 002158 749 HRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLEL 826 (958)
Q Consensus 749 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~el 826 (958)
||||||+|||++.++.+||+|||+++... .......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~el 286 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVG----------TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETT----------CEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecC----------CCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHH
Confidence 99999999999999999999999998542 11224557799999999987 6789999999999999999
Q ss_pred HhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC-CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 827 LTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM-GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 827 ltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
++|+.||......... ............... ......++..+.+++.+||+.||++||++.|++++
T Consensus 287 ltg~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 287 WCLFLPFGLVTPGIKG---SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp HHSSCSTTBCCTTCTT---CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred HhCCCCCCCcCccccc---chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 9999999754321000 000000000000000 11123567889999999999999999999999863
No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.2e-37 Score=348.16 Aligned_cols=264 Identities=23% Similarity=0.285 Sum_probs=201.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHHHHHccCCCCcceEEEEEEeC-----CeEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEE-----GEQM 697 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~ 697 (958)
++|...+.||+|+||+||+|.+. +|+.||||++.... .....++.+|++++++++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 57888899999999999999986 68999999997543 33456788999999999999999999998764 6789
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
+||||++ ++|.+++... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 91 lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 9999996 6999999753 4899999999999999999999999 9999999999999999999999999998664
Q ss_pred cCCCCCCc---cceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc-
Q 002158 778 VLDDEGTM---PTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV- 852 (958)
Q Consensus 778 ~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~- 852 (958)
........ .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||................+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 32211110 0111233568999999998765 678899999999999999999999997654332221111100000
Q ss_pred -------------hhhhccc--CC-----CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 853 -------------FSIIDNR--MG-----SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 853 -------------~~~i~~~--~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.+.+... .. .....++..+.+++.+||+.||++||+++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 00 0112456788999999999999999999999974
No 235
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.7e-37 Score=344.86 Aligned_cols=256 Identities=21% Similarity=0.303 Sum_probs=203.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CC-cEEEEEEeccCChhcHHHHHHHHHHHHccCCCC------cceEEEEEEeCCeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DN-TTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRN------LVSLLGYCDEEGEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~ 696 (958)
++|...+.||+|+||+||+|.+. ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 57888899999999999999975 34 68999999753 344567889999999997665 99999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe-----------------
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL----------------- 759 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl----------------- 759 (958)
++||||+ ++++.+++.......+++.++..++.|++.||+|||+++ |+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccc
Confidence 9999999 678888887665556999999999999999999999999 9999999999999
Q ss_pred --cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc
Q 002158 760 --DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGK 837 (958)
Q Consensus 760 --~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~ 837 (958)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHE----------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp EEESCCCEEECCCTTCEETTS----------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccCCCcEEEeecCccccccc----------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 5688999999999975321 1123569999999999999999999999999999999999999997654
Q ss_pred hhHHHHHHHhhcCcchh-hh--------------------------c------ccCCCCChHHHHHHHHHHHHccccCCC
Q 002158 838 NIVREVNVARDSGMVFS-II--------------------------D------NRMGSYPSECVERFVTLALRCCHDKPE 884 (958)
Q Consensus 838 ~~~~~~~~~~~~~~~~~-~i--------------------------~------~~~~~~~~~~~~~l~~li~~cl~~dP~ 884 (958)
............+.... .. . ..........+..+.+++.+||+.||+
T Consensus 244 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 244 NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 33222111111010000 00 0 000112335567899999999999999
Q ss_pred CCCCHHHHHHH
Q 002158 885 HRPSMSDVVRE 895 (958)
Q Consensus 885 ~RPs~~evl~~ 895 (958)
+|||++|++++
T Consensus 324 ~Rpt~~e~l~h 334 (355)
T 2eu9_A 324 QRITLAEALLH 334 (355)
T ss_dssp TSCCHHHHTTS
T ss_pred hCcCHHHHhcC
Confidence 99999999863
No 236
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.9e-37 Score=348.29 Aligned_cols=265 Identities=23% Similarity=0.292 Sum_probs=193.3
Q ss_pred HHHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe-
Q 002158 618 KELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE- 695 (958)
Q Consensus 618 ~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~- 695 (958)
.+.....++|...+.||+|+||+||+|.+. +++.||||++.... ....++.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445567789999999999999999999986 68999999986542 223456788899999999999999999966443
Q ss_pred ------EEEEEEecCCCCHHHHhcc--CCCCCchHHHHHHHHHHHHHHHHHhh--hcCCCCeeccCCCccceEecC-CCC
Q 002158 696 ------QMLVYEFVPNGTLRDWLSG--RTKENLNFAMRLRVALDSAKGILYLH--TEAHPPVFHRDIKASNILLDS-NLN 764 (958)
Q Consensus 696 ------~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH--~~~~~~iiH~Dikp~NILl~~-~~~ 764 (958)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence 7899999975 55554432 23345889999999999999999999 888 999999999999997 899
Q ss_pred eEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHH
Q 002158 765 AKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVLLELLTGMQPISHGKNIVREV 843 (958)
Q Consensus 765 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~ 843 (958)
+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..........
T Consensus 171 ~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 242 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSE--------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH 242 (360)
T ss_dssp EEECCCTTCBCCCTTS--------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEEeeCCCceecCCCC--------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHH
Confidence 9999999998653221 123456899999999997654 8999999999999999999999998655432222
Q ss_pred HHHhhcCcc----hhhh-----------------cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 844 NVARDSGMV----FSII-----------------DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 844 ~~~~~~~~~----~~~i-----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+.. ...+ .......+...+..+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 211110000 0000 000112223357889999999999999999999999974
No 237
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.5e-37 Score=350.54 Aligned_cols=256 Identities=20% Similarity=0.268 Sum_probs=202.2
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-----------CCCcceEEEEEEe
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-----------HRNLVSLLGYCDE 692 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~~ 692 (958)
.+|...+.||+|+||+||+|.+. +++.||||++... ....+.+.+|++++++++ |+||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 46788899999999999999975 7899999999753 334567889999999886 8999999999876
Q ss_pred CC----eEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEec------C
Q 002158 693 EG----EQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLD------S 761 (958)
Q Consensus 693 ~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~------~ 761 (958)
.+ ..++||||+ +++|.+++.......+++..+..++.|++.||+|||++ + |+||||||+|||++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcC
Confidence 54 789999999 89999999876556699999999999999999999998 8 99999999999994 3
Q ss_pred CCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCch---
Q 002158 762 NLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKN--- 838 (958)
Q Consensus 762 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~--- 838 (958)
.+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 243 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 243 (373)
T ss_dssp EEEEEECCCTTCEETTBC----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred cceEEEcccccccccCCC----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 447999999999865321 1234689999999999999999999999999999999999999975321
Q ss_pred ---hHHHHHHHhhcCcch-------------------------------hhhcccCCCCChHHHHHHHHHHHHccccCCC
Q 002158 839 ---IVREVNVARDSGMVF-------------------------------SIIDNRMGSYPSECVERFVTLALRCCHDKPE 884 (958)
Q Consensus 839 ---~~~~~~~~~~~~~~~-------------------------------~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~ 884 (958)
...........+... ..+......++...+..+.+++.+||+.||+
T Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 323 (373)
T 1q8y_A 244 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPR 323 (373)
T ss_dssp -CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTT
T ss_pred CChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcc
Confidence 001000000000000 0000111235678889999999999999999
Q ss_pred CCCCHHHHHHH
Q 002158 885 HRPSMSDVVRE 895 (958)
Q Consensus 885 ~RPs~~evl~~ 895 (958)
+|||++|++++
T Consensus 324 ~Rpt~~ell~h 334 (373)
T 1q8y_A 324 KRADAGGLVNH 334 (373)
T ss_dssp TCBCHHHHHTC
T ss_pred ccCCHHHHhhC
Confidence 99999999874
No 238
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.9e-37 Score=353.70 Aligned_cols=256 Identities=21% Similarity=0.342 Sum_probs=195.0
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCC------eEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEG------EQML 698 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~l 698 (958)
.+|...+.||+|+||+||+|.+..+..||+|++...... ..+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 357778999999999999999987777999988654322 237999999999999999999986543 3789
Q ss_pred EEEecCCCCHHHHhc-cCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-CCCCeEEeeeeeeccc
Q 002158 699 VYEFVPNGTLRDWLS-GRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD-SNLNAKVADFGLSRLA 776 (958)
Q Consensus 699 V~E~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla~~~ 776 (958)
||||++++.+..... ......+++..+..++.|+++||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999997644333322 112345899999999999999999999999 99999999999999 7999999999999865
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcc--h
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMV--F 853 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~--~ 853 (958)
.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..............+.. .
T Consensus 193 ~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~ 264 (394)
T 4e7w_A 193 IAGE--------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE 264 (394)
T ss_dssp CTTC--------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred cCCC--------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 3221 12235689999999999765 58999999999999999999999998765433332222111100 0
Q ss_pred -------hhhcccCC---------CCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 -------SIIDNRMG---------SYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 -------~~i~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.......+ .++...+.++.+++.+||+.||.+||++.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000 1122356789999999999999999999999975
No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=346.19 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=198.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe------
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE------ 695 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 695 (958)
.+|...+.||+|+||.||+|.+. +|+.||||++.... ....+++.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 46777889999999999999986 68999999997642 3335678999999999999999999999987654
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 696 QMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 696 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.++||||++ ++|.+++.. .+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999996 688888742 3899999999999999999999999 99999999999999999999999999875
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhcc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch-
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF- 853 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~- 853 (958)
... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||................+...
T Consensus 176 ~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 245 (353)
T 3coi_A 176 ADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGT 245 (353)
T ss_dssp ------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCH
T ss_pred CCC----------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 421 1223568999999999987 6789999999999999999999999976543322211111100000
Q ss_pred ---------------hhh----cccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 ---------------SII----DNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ---------------~~i----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
..+ ...........+..+.+++.+||+.||++||+++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 011122234567889999999999999999999999874
No 240
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=352.24 Aligned_cols=259 Identities=25% Similarity=0.323 Sum_probs=182.2
Q ss_pred CCC-CceeeeeCCeEEEEEEEC---CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe--CCeEEEEE
Q 002158 627 FSS-STQVGQGGYGKVYKGILS---DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE--EGEQMLVY 700 (958)
Q Consensus 627 ~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lV~ 700 (958)
|.. .++||+|+||+||+|.++ +++.||||++..... ...+.+|++++++++||||+++++++.. ....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 443 458999999999999975 578999999975432 3468899999999999999999999954 67899999
Q ss_pred EecCCCCHHHHhccC-------CCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe----cCCCCeEEee
Q 002158 701 EFVPNGTLRDWLSGR-------TKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL----DSNLNAKVAD 769 (958)
Q Consensus 701 E~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl----~~~~~~kl~D 769 (958)
||++ ++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9995 6888887532 1224899999999999999999999999 9999999999999 7789999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCchh---------
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVLLELLTGMQPISHGKNI--------- 839 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~--------- 839 (958)
||+++....... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||......
T Consensus 176 fg~a~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 176 MGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp TTCCC--------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred CCCceecCCCCc----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 999986532111 11223346799999999999874 5889999999999999999999999643321
Q ss_pred HHHHHHHhhcCcc----hhhhc--------------ccCCC---------CChHHHHHHHHHHHHccccCCCCCCCHHHH
Q 002158 840 VREVNVARDSGMV----FSIID--------------NRMGS---------YPSECVERFVTLALRCCHDKPEHRPSMSDV 892 (958)
Q Consensus 840 ~~~~~~~~~~~~~----~~~i~--------------~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 892 (958)
..........+.. ...+. ..... .....+..+.+|+.+||+.||.+|||++|+
T Consensus 252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 0000000000000 00000 00000 000114568899999999999999999999
Q ss_pred HHH
Q 002158 893 VRE 895 (958)
Q Consensus 893 l~~ 895 (958)
+++
T Consensus 332 L~h 334 (405)
T 3rgf_A 332 MQD 334 (405)
T ss_dssp HTS
T ss_pred hcC
Confidence 985
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=342.27 Aligned_cols=246 Identities=28% Similarity=0.417 Sum_probs=194.9
Q ss_pred HHHHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh------cHHHHHHHHHHHHcc----CCCCcceEE
Q 002158 619 ELAMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ------GQNEFLTEIKLLSRL----HHRNLVSLL 687 (958)
Q Consensus 619 el~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~H~niv~l~ 687 (958)
+.....++|...+.||+|+||.||+|.+. +++.||||++...... ....+.+|+.+++++ +|+||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34455678999999999999999999875 6889999999764322 223466799999998 899999999
Q ss_pred EEEEeCCeEEEEEEe-cCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-CCCCe
Q 002158 688 GYCDEEGEQMLVYEF-VPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD-SNLNA 765 (958)
Q Consensus 688 ~~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~-~~~~~ 765 (958)
+++...+..++|||| +++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++ .++.+
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeE
Confidence 999999999999999 78999999997643 4899999999999999999999999 99999999999999 88999
Q ss_pred EEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCC-CcchhhhHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002158 766 KVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVLLELLTGMQPISHGKNIVREVN 844 (958)
Q Consensus 766 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~ 844 (958)
||+|||+++..... ......||..|+|||++.+..+. .++||||||+++|||++|+.||.......
T Consensus 180 kl~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---- 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDE---------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL---- 246 (312)
T ss_dssp EECCCSSCEECCSS---------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----
T ss_pred EEEEcchhhhcccC---------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh----
Confidence 99999999865321 12235699999999999877765 48999999999999999999996422110
Q ss_pred HHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 845 VARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 845 ~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+..++..+.+++.+||+.||++||+++|++++
T Consensus 247 -------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 -------------EAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -------------HTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------------hhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01112344566789999999999999999999999974
No 242
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=6.1e-37 Score=334.12 Aligned_cols=253 Identities=24% Similarity=0.340 Sum_probs=204.2
Q ss_pred HHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC--ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEE
Q 002158 622 MATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG--SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQML 698 (958)
Q Consensus 622 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 698 (958)
...++|...+.||+|+||+||+|... +++.||||++... .....+.+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34567889999999999999999986 6899999998653 23346789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC---CCeEEeeeeeecc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN---LNAKVADFGLSRL 775 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~---~~~kl~DFGla~~ 775 (958)
||||+++++|.+++.... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||+++.
T Consensus 99 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 999999999999986543 4899999999999999999999999 9999999999999764 4699999999976
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
..... ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||....... .............
T Consensus 174 ~~~~~--------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~- 242 (287)
T 2wei_A 174 FQQNT--------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFD- 242 (287)
T ss_dssp BCCCS--------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCC-
T ss_pred ecCCC--------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCC-
Confidence 53211 1123458889999999865 48999999999999999999999997644322 1111111110000
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......++..+.+++.+||+.||++||+++|++++
T Consensus 243 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 243 -----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp -----SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 00012346788999999999999999999999984
No 243
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.5e-37 Score=341.88 Aligned_cols=250 Identities=24% Similarity=0.381 Sum_probs=181.3
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCC-hhcHHHHHHHHH-HHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGS-LQGQNEFLTEIK-LLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|...+.||+|+||.||+|.+. +++.||||++.... .....++..|+. +++.++||||+++++++..++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 56778899999999999999986 68999999997653 334456666766 7777899999999999999999999999
Q ss_pred ecCCCCHHHHhcc---CCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeecccc
Q 002158 702 FVPNGTLRDWLSG---RTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAP 777 (958)
Q Consensus 702 ~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 777 (958)
|++ |+|.+++.. .....+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 997 588887753 2234589999999999999999999998 8 9999999999999999999999999997653
Q ss_pred cCCCCCCccceeeeeccCCCCccChhhh----ccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcch
Q 002158 778 VLDDEGTMPTHVSTIVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVF 853 (958)
Q Consensus 778 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 853 (958)
... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||...........
T Consensus 178 ~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--------- 240 (327)
T 3aln_A 178 DSI--------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT--------- 240 (327)
T ss_dssp ------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------C---------
T ss_pred ccc--------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHH---------
Confidence 211 12234699999999998 456789999999999999999999999975432211111
Q ss_pred hhhcccC----CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 854 SIIDNRM----GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 854 ~~i~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....... ......++..+.+++.+||+.||++||++.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 241 QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 1111111 11123456789999999999999999999999874
No 244
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.2e-37 Score=342.54 Aligned_cols=253 Identities=20% Similarity=0.264 Sum_probs=175.8
Q ss_pred HcCCCCC-ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEEEe----CCeEE
Q 002158 624 TAYFSSS-TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE----EGEQM 697 (958)
Q Consensus 624 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~ 697 (958)
.++|... +.||+|+||+||+|.+. +++.||||++.... . ...+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 3467664 46999999999999987 68999999987531 1 12223344667799999999999876 44689
Q ss_pred EEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEeeeeeec
Q 002158 698 LVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVADFGLSR 774 (958)
Q Consensus 698 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~DFGla~ 774 (958)
+||||+++|+|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998766567999999999999999999999999 999999999999976 4559999999997
Q ss_pred ccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 775 LAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||............. . .....
T Consensus 180 ~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~-~~~~~ 248 (336)
T 3fhr_A 180 ETTQ---------NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK-R-RIRLG 248 (336)
T ss_dssp EC-------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------
T ss_pred eccc---------cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH-H-hhhcc
Confidence 5421 11223568999999999988889999999999999999999999996433211100000 0 00000
Q ss_pred hhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
. ..........++..+.+++.+||+.||++||+++|++++
T Consensus 249 ~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 Q-YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred c-cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 000011123467789999999999999999999999985
No 245
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=354.41 Aligned_cols=323 Identities=21% Similarity=0.217 Sum_probs=255.3
Q ss_pred CCCCCCCceeeCcc----ccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCC-CCccccCCCCCcEEEe
Q 002158 66 PCMSNWTGVLCFDT----VETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGT-IPKEIGNISSLIFLLL 140 (958)
Q Consensus 66 ~c~~~w~gV~C~~~----~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~-ip~~i~~l~~L~~L~L 140 (958)
.|...|..|.|... ++.....+++.|+|++|++++..+..|.++++|++|++++|.... .|..|.++++|++|+|
T Consensus 8 ~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 87 (477)
T 2id5_A 8 ECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGL 87 (477)
T ss_dssp EEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred eECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEEC
Confidence 34445789999653 223334578889999999888888888889999999887655444 4778888899999999
Q ss_pred eCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccC
Q 002158 141 NGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGN 220 (958)
Q Consensus 141 s~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 220 (958)
++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++.
T Consensus 88 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 88 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp CSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 99988865556678888999999999998888888888888999999999988888888888888999999999988877
Q ss_pred CCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCC--CC
Q 002158 221 LPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPS--KK 297 (958)
Q Consensus 221 ~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~--~~ 297 (958)
.+..|..+++|+.|+|++|.++. ..+..|..+++|+.|++++|.+.+..+ ......+|+.|+|++|.+++ +|. ..
T Consensus 168 ~~~~l~~l~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~ 245 (477)
T 2id5_A 168 PTEALSHLHGLIVLRLRHLNINA-IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPYLAVR 245 (477)
T ss_dssp CHHHHTTCTTCCEEEEESCCCCE-ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCS-CCHHHHT
T ss_pred ChhHhcccCCCcEEeCCCCcCcE-eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccc-cCHHHhc
Confidence 77778888899999999988873 445578888889999998887665544 45555688899999998884 442 35
Q ss_pred CCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCC
Q 002158 298 LSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLP 375 (958)
Q Consensus 298 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~ 375 (958)
.+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..|..+..+ +.|+.|+|++|+|+.++... .++
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~ 320 (477)
T 2id5_A 246 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL-----NYLRVLNVSGNQLTTLEESVFHSVG 320 (477)
T ss_dssp TCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTC-----TTCCEEECCSSCCSCCCGGGBSCGG
T ss_pred CccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCc-----ccCCEEECCCCcCceeCHhHcCCCc
Confidence 56888999999998888888888888899999999998887767666544 35668888888888887654 678
Q ss_pred CcceEEeCCCCCCCCCCCCC
Q 002158 376 NNVTLRLGGNPICTSANIPN 395 (958)
Q Consensus 376 ~L~~L~l~~N~l~~~~~~~~ 395 (958)
+|+.|+|++|||.|+|.+.|
T Consensus 321 ~L~~L~l~~N~l~c~c~~~~ 340 (477)
T 2id5_A 321 NLETLILDSNPLACDCRLLW 340 (477)
T ss_dssp GCCEEECCSSCEECSGGGHH
T ss_pred ccCEEEccCCCccCccchHh
Confidence 88888888888866665443
No 246
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.1e-37 Score=343.38 Aligned_cols=244 Identities=26% Similarity=0.427 Sum_probs=200.7
Q ss_pred HHHHcCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChh------cHHHHHHHHHHHHccC--CCCcceEEEEEE
Q 002158 621 AMATAYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQ------GQNEFLTEIKLLSRLH--HRNLVSLLGYCD 691 (958)
Q Consensus 621 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~~~~~ 691 (958)
....++|...+.||+|+||.||+|.+. +++.||||++...... ..+.+.+|+.++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 334567888899999999999999975 6899999998654211 2245678999999996 599999999999
Q ss_pred eCCeEEEEEEecCC-CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec-CCCCeEEee
Q 002158 692 EEGEQMLVYEFVPN-GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD-SNLNAKVAD 769 (958)
Q Consensus 692 ~~~~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~-~~~~~kl~D 769 (958)
.++..++||||+.+ ++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+|||++ +++.+||+|
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEee
Confidence 99999999999976 89999997643 4899999999999999999999999 99999999999999 789999999
Q ss_pred eeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002158 770 FGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARD 848 (958)
Q Consensus 770 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~ 848 (958)
||+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... . .
T Consensus 194 fg~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~-~ 257 (320)
T 3a99_A 194 FGSGALLKDT---------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------I-R 257 (320)
T ss_dssp CTTCEECCSS---------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------H-H
T ss_pred Cccccccccc---------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh------h-c
Confidence 9999865321 1123469999999999987776 67899999999999999999999643211 0 0
Q ss_pred cCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 849 SGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 849 ~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
.....+..++..+.+++.+||+.||++||+++|++++
T Consensus 258 ----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 ----------GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----------ccccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111233456788999999999999999999999874
No 247
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.8e-36 Score=350.00 Aligned_cols=254 Identities=23% Similarity=0.288 Sum_probs=189.2
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEecC
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFVP 704 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~ 704 (958)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 34445789999999998776678999999998653 245678999999987 89999999999999999999999995
Q ss_pred CCCHHHHhccCCCCC-----chHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCC-------------CCeE
Q 002158 705 NGTLRDWLSGRTKEN-----LNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSN-------------LNAK 766 (958)
Q Consensus 705 ~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~-------------~~~k 766 (958)
|+|.+++....... .++..++.++.|++.||+|||+++ |+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 69999997654211 133346789999999999999999 9999999999999754 4899
Q ss_pred EeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc-------CCCCCcchhhhHHHHHHHHHh-CCCCCCCCch
Q 002158 767 VADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVLLELLT-GMQPISHGKN 838 (958)
Q Consensus 767 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~ 838 (958)
|+|||+++......... ........||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.....
T Consensus 169 L~DFG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSF---RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp ECCCTTCEECCC-----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EcccccceecCCCCccc---eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 99999998754322110 111234579999999999976 568899999999999999999 9999975433
Q ss_pred hHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 839 IVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 839 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
....+ ....... .......+..++.++.+++.+||+.||.+||++.|++++
T Consensus 246 ~~~~i--~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 246 RESNI--IRGIFSL----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HHHHH--HHTCCCC----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hHHHH--hcCCCCc----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 22111 1110000 000111245678899999999999999999999999863
No 248
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=335.70 Aligned_cols=251 Identities=20% Similarity=0.290 Sum_probs=183.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-hcHH-HHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-QGQN-EFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~-~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~E 701 (958)
++|...+.||+|+||.||+|.+. +|+.||||++..... .... .+.++..+++.++||||+++++++..++..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 45777889999999999999986 689999999976532 2223 34455567888899999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-CCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE-AHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
|+ ++.+..+.... ...+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 105 LM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred cc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 99 55666665432 34589999999999999999999995 8 9999999999999999999999999987543211
Q ss_pred CCCCccceeeeeccCCCCccChhhhc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
......||+.|+|||++. ...++.++||||||+++|||++|+.||..................
T Consensus 180 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---- 247 (318)
T 2dyl_A 180 --------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP---- 247 (318)
T ss_dssp ---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC----
T ss_pred --------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC----
Confidence 122346999999999994 556888999999999999999999999764433332222211110
Q ss_pred hcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
... .....++..+.+++.+||+.||.+||+++|++++
T Consensus 248 --~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 --PLL-PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --CCC-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --CCC-CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 000 1112356789999999999999999999999975
No 249
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=347.79 Aligned_cols=251 Identities=22% Similarity=0.298 Sum_probs=189.5
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEEEec
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVYEFV 703 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~ 703 (958)
.+|...+.||+|+||+||.....+++.||||++...... .+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 457777899999999966555568999999999754332 356899999999 7999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC-----CCCeEEeeeeeeccccc
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS-----NLNAKVADFGLSRLAPV 778 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~-----~~~~kl~DFGla~~~~~ 778 (958)
+ |+|.+++..... .....++..++.|+++||+|||+.+ |+||||||+|||++. ...+||+|||+++....
T Consensus 101 ~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 101 A-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp S-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred C-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 5 699999976542 2455567899999999999999999 999999999999953 23588999999986543
Q ss_pred CCCCCCccceeeeeccCCCCccChhhhc---cCCCCCcchhhhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcCcchh
Q 002158 779 LDDEGTMPTHVSTIVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVLLELLT-GMQPISHGKNIVREVNVARDSGMVFS 854 (958)
Q Consensus 779 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~S~Gv~l~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 854 (958)
.... ........||+.|+|||++. ...++.++|||||||++|||++ |..||........ ........
T Consensus 176 ~~~~----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~--~~~~~~~~--- 246 (432)
T 3p23_A 176 GRHS----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NILLGACS--- 246 (432)
T ss_dssp --------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH--HHHTTCCC---
T ss_pred CCcc----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH--HHHhccCC---
Confidence 2111 12233467999999999997 4567889999999999999999 9999854332211 11111000
Q ss_pred hhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 855 IIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 855 ~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
......+......+.+++.+||+.||++||+++|++++
T Consensus 247 ---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 247 ---LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp ---CTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---ccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 01111234566778999999999999999999999953
No 250
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.3e-36 Score=352.31 Aligned_cols=370 Identities=17% Similarity=0.191 Sum_probs=286.6
Q ss_pred CCCCCCCCceeeCcccc---CCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCccc-CCC-CccccCCCCCcEEE
Q 002158 65 DPCMSNWTGVLCFDTVE---TDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLT-GTI-PKEIGNISSLIFLL 139 (958)
Q Consensus 65 ~~c~~~w~gV~C~~~~~---~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~-~~i-p~~i~~l~~L~~L~ 139 (958)
..|.|.+..|.|....- .....+++.|+|++|.+++..+..|+++++|++|++++|.. +.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 44554555688865311 11345799999999999999999999999999999987754 456 46699999999999
Q ss_pred eeCCCCCCCCChhhcCCCCCCEEecccccccccCccc--cccccccceEecccccccccCchh-hcCCccchhhhccCCc
Q 002158 140 LNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKS--FANLSRVRHLHLNNNSIGGQIPSE-LSKLSTLIHLLVDNNN 216 (958)
Q Consensus 140 Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~~N~ 216 (958)
|++|.+++..|..|+++++|++|+|++|++++.++.. |..+++|++|+|++|.+++..|.. +.++++|++|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999866655 999999999999999999887876 8999999999999999
Q ss_pred cccCCCcccCCC--CCccEEEccCCCCCCCCccc--------cccCCCCCCEEEcccCCCCCCCC---------------
Q 002158 217 LSGNLPPELSEL--PQLCILQLDNNNFSASEIPA--------TYGNFSKLVKLSLRNCNLQGAVP--------------- 271 (958)
Q Consensus 217 l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~p~--------~~~~l~~L~~L~L~~N~l~~~~~--------------- 271 (958)
+++..+..+..+ .+|+.|++++|.+.... +. .+..+++|+.|+|++|++++..+
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~-~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMN-EYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCS-TTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEE
T ss_pred ccccChhhhhccccccccccccccCcccccc-hhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeE
Confidence 999888887765 56667777776665311 11 12244566666666666543111
Q ss_pred -----------------------CCC--CCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCC
Q 002158 272 -----------------------DLS--RIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPF 325 (958)
Q Consensus 272 -----------------------~l~--~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 325 (958)
.+. ..++|+.|+|++|.+++.++.. ..+++|++|+|++|++++..+..|.++++
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 011 2368999999999998776654 55689999999999999999999999999
Q ss_pred CCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccC-C-CCCCcceEEeCCCCCCCCCCCCCCCcccccC
Q 002158 326 LQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGD-L-TLPNNVTLRLGGNPICTSANIPNTGRFCGSD 403 (958)
Q Consensus 326 L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~-~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 403 (958)
|++|+|++|++++..|..+..+ +.|+.|+|++|+++.+... . .+++|+.|+|++|++...... .+....
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~ 395 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENL-----DKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDG----IFDRLT 395 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTC-----TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT----TTTTCT
T ss_pred CCEEECCCCccCCcChhHhcCc-----ccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHh----HhccCC
Confidence 9999999999987667666544 4567999999999988543 3 899999999999999753321 123345
Q ss_pred CCCCccccccCCCCCCC-CCCCCCcccccCCCCC-Cceeeeec
Q 002158 404 AGGDETLTNSKVNCPVQ-ACPVDNFFEYVPASPE-PCFCAAPL 444 (958)
Q Consensus 404 ~~~~~~L~~n~~~C~c~-~~~~~~~~~~~~~~~~-~~~c~sp~ 444 (958)
..+.+.|.+|+|.|+|+ ..++..|++....... ...|.+|.
T Consensus 396 ~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~~~~~~c~~~~ 438 (455)
T 3v47_A 396 SLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSG 438 (455)
T ss_dssp TCCEEECCSSCBCCCTTTTHHHHHHHHHTTTTEESCCBBTTTC
T ss_pred cccEEEccCCCcccCCCcchHHHHHHHhCccceeeeeeecCCC
Confidence 66788999999999998 5667789876544433 35676653
No 251
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.7e-36 Score=359.47 Aligned_cols=266 Identities=24% Similarity=0.350 Sum_probs=206.9
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEe------CCeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE------EGEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~~ 696 (958)
.+|...+.||+|+||+||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 57999999999999999999975 6899999998764 44456779999999999999999999999765 6778
Q ss_pred EEEEEecCCCCHHHHhccCC-CCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCC---eEEeeeee
Q 002158 697 MLVYEFVPNGTLRDWLSGRT-KENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLN---AKVADFGL 772 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~---~kl~DFGl 772 (958)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999997643 235899999999999999999999999 999999999999997765 99999999
Q ss_pred ecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcC--
Q 002158 773 SRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSG-- 850 (958)
Q Consensus 773 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~-- 850 (958)
++...... ......||+.|+|||++.+..++.++||||||+++|||++|..||........+........
T Consensus 171 a~~~~~~~--------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 171 AKELDQGE--------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE 242 (676)
T ss_dssp CCBTTSCC--------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-----
T ss_pred cccccccc--------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccch
Confidence 98653221 12345699999999999999999999999999999999999999976543322211110000
Q ss_pred --cchhhhc---------ccCCCCChHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHHhHh
Q 002158 851 --MVFSIID---------NRMGSYPSECVERFVTLALRCCHDKPEHRPSMSD-----VVRELENILK 901 (958)
Q Consensus 851 --~~~~~i~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~~~~ 901 (958)
....... +.........+..+.+++.+||+.||++||+++| .++.+++++.
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0000000 1112345568899999999999999999999988 4566666654
No 252
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-35 Score=366.45 Aligned_cols=361 Identities=20% Similarity=0.178 Sum_probs=242.3
Q ss_pred CceeeEEEEccCCcCCCCccccccCCCCcceeeccCc-ccCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCE
Q 002158 84 GHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWND-LTGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNR 161 (958)
Q Consensus 84 ~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~-~~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 161 (958)
...+++.|+|++|.+++..+..|.++++|++|++++| ..+.+ |..|.++++|++|+|++|.+++..|..|.++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 3457889999999998888888888888888888766 66666 667888888888888888888777888888888888
Q ss_pred EecccccccccCccc--cccccccceEecccccccccCc-hhhcCCccchhhhccCCccccCCCcccCC-----------
Q 002158 162 LQVDENNITGTIPKS--FANLSRVRHLHLNNNSIGGQIP-SELSKLSTLIHLLVDNNNLSGNLPPELSE----------- 227 (958)
Q Consensus 162 L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~l~~----------- 227 (958)
|+|++|++++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 888888888766554 7888888888888888876544 46778888888888777776544433221
Q ss_pred ---------------C----------------------------------------------------------------
Q 002158 228 ---------------L---------------------------------------------------------------- 228 (958)
Q Consensus 228 ---------------l---------------------------------------------------------------- 228 (958)
+
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~ 261 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFA 261 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhh
Confidence 1
Q ss_pred ----CCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCC-CCCCCCc
Q 002158 229 ----PQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPS-KKLSENV 302 (958)
Q Consensus 229 ----~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L 302 (958)
++|+.|+|++|.++ ...+..|..+++|+.|+|++|++++..+. |..+++|++|+|++|.+++..+. ...+++|
T Consensus 262 ~l~~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 340 (844)
T 3j0a_A 262 GLARSSVRHLDLSHGFVF-SLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKV 340 (844)
T ss_dssp TTTTSCCCEEECTTCCCC-EECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTC
T ss_pred ccccCCccEEECCCCccc-ccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCC
Confidence 23334444444443 12244566677777788888877777663 77777888888888877755443 3445777
Q ss_pred CEEEccCCcCCCccchhccCCCCCCeEeeecccCCCc------------------cchh---------------------
Q 002158 303 TTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGS------------------IPAT--------------------- 343 (958)
Q Consensus 303 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------------------ip~~--------------------- 343 (958)
+.|+|++|.|++..+..|..+++|+.|+|++|.+++. +|..
T Consensus 341 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~ 420 (844)
T 3j0a_A 341 AYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILY 420 (844)
T ss_dssp CEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHH
T ss_pred CEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhh
Confidence 7777777777777777777777777777777766531 0000
Q ss_pred -hhcccc------------------------------------------------c-CccccceEeccCCCCCCCccCC-
Q 002158 344 -IWQNKS------------------------------------------------F-STKARLKIDLRNNSFSNIVGDL- 372 (958)
Q Consensus 344 -l~~~~~------------------------------------------------~-~~~~l~~L~Ls~N~l~~l~~~~- 372 (958)
+..+.. + ..+.|+.|+|++|+|+.++...
T Consensus 421 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 500 (844)
T 3j0a_A 421 FLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVF 500 (844)
T ss_dssp HHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSS
T ss_pred hhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHc
Confidence 000000 0 0134455555555555555443
Q ss_pred -CCCCcceEEeCCCCCCCCCCCCCCCcc---------------cccCCCCCccccccCCCCCCCCCCCCCcccccCCCCC
Q 002158 373 -TLPNNVTLRLGGNPICTSANIPNTGRF---------------CGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPE 436 (958)
Q Consensus 373 -~l~~L~~L~l~~N~l~~~~~~~~~~~~---------------~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~ 436 (958)
.+++|+.|+|++|.+...........+ -.......+.+.+|||.|+|+..++..|+........
T Consensus 501 ~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~~~f~~~~~~~~~~~~ 580 (844)
T 3j0a_A 501 SHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECELSTFINWLNHTNVTIA 580 (844)
T ss_dssp SSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSCCSHHHHHHHTTTTTC
T ss_pred cchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccccHHHHHHHHhcCcccc
Confidence 778888888888888754432211100 0012346678999999999999999999876544332
Q ss_pred ----Cceeeeece
Q 002158 437 ----PCFCAAPLR 445 (958)
Q Consensus 437 ----~~~c~sp~~ 445 (958)
...|++|..
T Consensus 581 ~~~~~~~C~~p~~ 593 (844)
T 3j0a_A 581 GPPADIYCVYPDS 593 (844)
T ss_dssp CCGGGCCCSSCSS
T ss_pred cccccCccCCchh
Confidence 256766643
No 253
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2e-35 Score=357.34 Aligned_cols=366 Identities=20% Similarity=0.200 Sum_probs=235.5
Q ss_pred CceeeCcc----ccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCC-CCccccCCCCCcEEEeeCCCCC
Q 002158 72 TGVLCFDT----VETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGT-IPKEIGNISSLIFLLLNGNKLS 146 (958)
Q Consensus 72 ~gV~C~~~----~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~-ip~~i~~l~~L~~L~Ls~n~l~ 146 (958)
..|.|.+. ++.+...+++.|+|++|.+++..+..|.++++|++|++++|.... .|..|.++++|++|+|++|.++
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~ 93 (606)
T 3vq2_A 14 ITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 93 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCccc
Confidence 35777542 233344678899999999988888888889999999887654444 4667888888999999988888
Q ss_pred CCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccc-cCchhhcCCccchhhhccCCccccCCCccc
Q 002158 147 GSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGG-QIPSELSKLSTLIHLLVDNNNLSGNLPPEL 225 (958)
Q Consensus 147 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l 225 (958)
+..|..|+++++|++|+|++|++++..+..++++++|++|+|++|.+++ .+|..++++++|++|++++|++++..+..+
T Consensus 94 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 94 SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 173 (606)
T ss_dssp CCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTT
T ss_pred ccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhh
Confidence 7778888888888888888888887776778888888888888888875 567788888888888888777665433211
Q ss_pred C-------------------------------------------------------------------------------
Q 002158 226 S------------------------------------------------------------------------------- 226 (958)
Q Consensus 226 ~------------------------------------------------------------------------------- 226 (958)
.
T Consensus 174 ~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~ 253 (606)
T 3vq2_A 174 QFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPS 253 (606)
T ss_dssp HHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGG
T ss_pred hhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChH
Confidence 1
Q ss_pred --------------------------------------------------------------------------------
Q 002158 227 -------------------------------------------------------------------------------- 226 (958)
Q Consensus 227 -------------------------------------------------------------------------------- 226 (958)
T Consensus 254 ~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L 333 (606)
T 3vq2_A 254 IMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSL 333 (606)
T ss_dssp GGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEE
T ss_pred HhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCcccee
Confidence
Q ss_pred --------------CCCCccEEEccCCCCCCCC-ccccccCCCCCCEEEcccC-----------------------CCCC
Q 002158 227 --------------ELPQLCILQLDNNNFSASE-IPATYGNFSKLVKLSLRNC-----------------------NLQG 268 (958)
Q Consensus 227 --------------~l~~L~~L~L~~N~l~~~~-~p~~~~~l~~L~~L~L~~N-----------------------~l~~ 268 (958)
.+++|++|++++|+++... .+..+..+++|+.|+|++| ++.+
T Consensus 334 ~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~ 413 (606)
T 3vq2_A 334 TLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKR 413 (606)
T ss_dssp EEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEES
T ss_pred eccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCC
Confidence 1233333333333332110 1223333344444444444 4443
Q ss_pred CCC--CCCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCC-ccchhccCCCCCCeEeeecccCCCccchhh
Q 002158 269 AVP--DLSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNG-SILESISNLPFLQTLSLENNFLTGSIPATI 344 (958)
Q Consensus 269 ~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l 344 (958)
.++ .+..+++|++|++++|.+++..|.. ..+++|++|+|++|.+++ ..|..|..+++|++|+|++|++++..|..+
T Consensus 414 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 493 (606)
T 3vq2_A 414 VTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493 (606)
T ss_dssp TTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhh
Confidence 333 2444445555555555544433332 334566666666666655 356666666666666666666665555555
Q ss_pred hcccccCccccceEeccCCCCCCCcc-CC-CCCCcceEEeCCCCCCCCCCCCCCCcccccC-CCCCccccccCCCCCCCC
Q 002158 345 WQNKSFSTKARLKIDLRNNSFSNIVG-DL-TLPNNVTLRLGGNPICTSANIPNTGRFCGSD-AGGDETLTNSKVNCPVQA 421 (958)
Q Consensus 345 ~~~~~~~~~~l~~L~Ls~N~l~~l~~-~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~-~~~~~~L~~n~~~C~c~~ 421 (958)
..+ +.|+.|+|++|+++++.. .. .+++|+.|++++|++...+. . +.... ..+.+.+.+|+|.|+|+.
T Consensus 494 ~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~---~--~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 494 DTL-----HRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKG---I--LQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TTC-----TTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEES---C--GGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccc-----ccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCH---h--HhhhcccCcEEEccCCCcccCCcc
Confidence 433 456688888888888743 33 78888888888888863221 1 22222 367889999999999999
Q ss_pred CCCCCcccccCCCC---CCceeeeeceee
Q 002158 422 CPVDNFFEYVPASP---EPCFCAAPLRIG 447 (958)
Q Consensus 422 ~~~~~~~~~~~~~~---~~~~c~sp~~~~ 447 (958)
.++..|++...... +...|++|....
T Consensus 564 ~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 592 (606)
T 3vq2_A 564 QKFLQWVKEQKQFLVNVEQMTCATPVEMN 592 (606)
T ss_dssp HHHHTTTTTSSSSBSSGGGCCCC------
T ss_pred HHHHHHHHcCcccccCCccceeCCChHhC
Confidence 99999997654433 347898886643
No 254
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.9e-36 Score=344.07 Aligned_cols=239 Identities=15% Similarity=0.133 Sum_probs=181.4
Q ss_pred CCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCC-CCc----------ce-----
Q 002158 626 YFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHH-RNL----------VS----- 685 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H-~ni----------v~----- 685 (958)
.|...+.||+|+||+||+|.+. +|+.||||++..... ...+.|.+|+.+++.++| +|. +.
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 4556789999999999999975 699999999874322 235679999999999987 321 11
Q ss_pred ------EEEEEEe-----CCeEEEEEEecCCCCHHHHhc-----cCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeec
Q 002158 686 ------LLGYCDE-----EGEQMLVYEFVPNGTLRDWLS-----GRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFH 749 (958)
Q Consensus 686 ------l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH 749 (958)
+..++.. ....+++|+++ +++|.++++ ......+++..++.++.|+++||+|||+++ |+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence 1111111 22467788876 689999985 233445899999999999999999999999 999
Q ss_pred cCCCccceEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhh----------ccCCCCCcchhhhH
Q 002158 750 RDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYF----------LTHKLTDKSDVYSL 819 (958)
Q Consensus 750 ~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DV~S~ 819 (958)
|||||+|||++.++.+||+|||+++.... ......| +.|+|||++ ....++.++|||||
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSl 303 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA----------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTE----------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCC----------ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHH
Confidence 99999999999999999999999875421 1334567 999999999 55568889999999
Q ss_pred HHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002158 820 GVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTLALRCCHDKPEHRPSMSDVVR 894 (958)
Q Consensus 820 Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 894 (958)
||++|||++|+.||...... .. ...+..... .++..+.+++.+||+.||++||++.++++
T Consensus 304 Gvil~elltg~~Pf~~~~~~----------~~-~~~~~~~~~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 304 GLAIYWIWCADLPNTDDAAL----------GG-SEWIFRSCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHHHHHSSCCCCTTGGG----------SC-SGGGGSSCC----CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHCCCCCCCcchh----------hh-HHHHHhhcc----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999999999753321 11 111111111 33577999999999999999999888764
No 255
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5e-35 Score=350.24 Aligned_cols=332 Identities=19% Similarity=0.171 Sum_probs=261.9
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEe
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQ 163 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 163 (958)
..+++.|+|++|.+++..+..|+++++|++|++++|....+ |..|.++++|++|+|++|.++ .+|.. .+++|++|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 35789999999999998889999999999999986655554 777999999999999999998 67766 899999999
Q ss_pred cccccccc-cCccccccccccceEecccccccccCchhhcCCccchhhhccCCcc--ccCCCcccCCCC-----------
Q 002158 164 VDENNITG-TIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNL--SGNLPPELSELP----------- 229 (958)
Q Consensus 164 L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l--~~~~~~~l~~l~----------- 229 (958)
|++|++++ .+|..|.++++|++|+|++|.+++.....+..+ +|+.|++++|++ ++..|..+..+.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L-~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n 206 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL-HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPN 206 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTS-CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSS
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhc-eeeEEEeecccccccccCcccccccCcceEEEEecCc
Confidence 99999986 356889999999999999999885333333333 338888888877 655555554433
Q ss_pred ----------------------------------------------------------------------CccEEEccCC
Q 002158 230 ----------------------------------------------------------------------QLCILQLDNN 239 (958)
Q Consensus 230 ----------------------------------------------------------------------~L~~L~L~~N 239 (958)
+|++|++++|
T Consensus 207 ~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n 286 (562)
T 3a79_B 207 SLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNL 286 (562)
T ss_dssp SCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEE
T ss_pred cchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEecc
Confidence 5566666666
Q ss_pred CCCCCCccccc-----------------------------------------------------cCCCCCCEEEcccCCC
Q 002158 240 NFSASEIPATY-----------------------------------------------------GNFSKLVKLSLRNCNL 266 (958)
Q Consensus 240 ~l~~~~~p~~~-----------------------------------------------------~~l~~L~~L~L~~N~l 266 (958)
.+++ .+|..+ ..+++|++|+|++|++
T Consensus 287 ~l~~-~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l 365 (562)
T 3a79_B 287 TITE-RIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF 365 (562)
T ss_dssp EECS-CCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCC
T ss_pred Eeec-cccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcc
Confidence 6542 334332 6778999999999999
Q ss_pred CCCCC-CCCCCCCcCEEeccCCcCCCcC--C-CCCCCCCcCEEEccCCcCCC-ccchhccCCCCCCeEeeecccCCCccc
Q 002158 267 QGAVP-DLSRIPNLYYLDLSWNHLTGSI--P-SKKLSENVTTIDLSDNYLNG-SILESISNLPFLQTLSLENNFLTGSIP 341 (958)
Q Consensus 267 ~~~~~-~l~~l~~L~~L~Ls~N~l~~~~--~-~~~~~~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~ip 341 (958)
++..+ .+..+++|++|+|++|++++.. | ....+++|++|+|++|++++ ..+..+..+++|++|+|++|++++.+|
T Consensus 366 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 366 TDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred ccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 98665 5899999999999999998532 2 24566899999999999998 555568899999999999999988777
Q ss_pred hhhhcccccCccccceEeccCCCCCCCccCC-CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCC
Q 002158 342 ATIWQNKSFSTKARLKIDLRNNSFSNIVGDL-TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQ 420 (958)
Q Consensus 342 ~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~ 420 (958)
..+. +.++.|+|++|+|+.++... .+++|+.|+|++|.+...+.. .+......+.+.|.+|+|.|+|+
T Consensus 446 ~~l~-------~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~----~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 446 RCLP-------PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDG----VFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SSCC-------TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTT----STTTCTTCCCEECCSCCBCCCHH
T ss_pred hhhc-------CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHH----HHhcCCCCCEEEecCCCcCCCcc
Confidence 6542 57889999999999999876 899999999999999753322 23344566789999999999999
Q ss_pred CCCCCC-cccccC
Q 002158 421 ACPVDN-FFEYVP 432 (958)
Q Consensus 421 ~~~~~~-~~~~~~ 432 (958)
..++.. |++...
T Consensus 515 ~~~~~~~~~~~~~ 527 (562)
T 3a79_B 515 GIRYLSEWINKHS 527 (562)
T ss_dssp HHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhcC
Confidence 998855 876544
No 256
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.4e-35 Score=320.88 Aligned_cols=229 Identities=13% Similarity=0.100 Sum_probs=185.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh---hcHHHHHHHHHHHHccCCCCcceEEEEEEeCCeEEEEE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL---QGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+|...+.||+|+||.||+|.+. +++.||||++..... ...+.|.+|+..+++++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 46778889999999999999986 489999999976532 33467999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||+++++|.++++.. ....++.+++.|+++||+|||+++ |+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999542 344568899999999999999999 9999999999999999999998544
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRM 860 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 860 (958)
|++ .++.++|||||||++|||+||+.||......... ......+....
T Consensus 175 ------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-------~~~~~~~~~~~ 222 (286)
T 3uqc_A 175 ------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-------APAERDTAGQP 222 (286)
T ss_dssp ------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-------EECCBCTTSCB
T ss_pred ------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-------HHHHHHhccCC
Confidence 333 2678999999999999999999999754321100 00000000000
Q ss_pred ---CCCChHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhHhh
Q 002158 861 ---GSYPSECVERFVTLALRCCHDKPEHRPSMSDVVRELENILKM 902 (958)
Q Consensus 861 ---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 902 (958)
......++..+.+++.+||+.||++| |++|+++.|+++...
T Consensus 223 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 223 IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 01123466789999999999999999 999999999998754
No 257
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.2e-35 Score=346.84 Aligned_cols=343 Identities=20% Similarity=0.220 Sum_probs=228.3
Q ss_pred eeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEec
Q 002158 86 LHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQV 164 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 164 (958)
.+++.|+|++|.+++..+..|.++++|++|++++|....+ |..|.++++|++|+|++|.++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 3566666666666666666666666666666664443333 556666666666666666666 45544 5666666666
Q ss_pred ccccccc-cCccccccccccceEecccccccc-------------------------cCchhhcCCc-------------
Q 002158 165 DENNITG-TIPKSFANLSRVRHLHLNNNSIGG-------------------------QIPSELSKLS------------- 205 (958)
Q Consensus 165 ~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~-------------------------~~p~~l~~l~------------- 205 (958)
++|++++ .+|..|+++++|++|+|++|.+++ ..|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~ 177 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKE 177 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcc
Confidence 6666665 355666666666666666666543 3333333311
Q ss_pred ----------------------------------------------------------------------cchhhhccCC
Q 002158 206 ----------------------------------------------------------------------TLIHLLVDNN 215 (958)
Q Consensus 206 ----------------------------------------------------------------------~L~~L~L~~N 215 (958)
+|++|++++|
T Consensus 178 ~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n 257 (520)
T 2z7x_B 178 FHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNV 257 (520)
T ss_dssp CCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEE
T ss_pred hhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecc
Confidence 3444444444
Q ss_pred ccccCCCccc-----CCCCCccEEEccCCCCCCCCcc-cc-------------------------ccCCCCCCEEEcccC
Q 002158 216 NLSGNLPPEL-----SELPQLCILQLDNNNFSASEIP-AT-------------------------YGNFSKLVKLSLRNC 264 (958)
Q Consensus 216 ~l~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~~p-~~-------------------------~~~l~~L~~L~L~~N 264 (958)
++++.+|..+ ..+++|+.+++++|.+ .+| .. +..+++|++|++++|
T Consensus 258 ~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~---~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n 334 (520)
T 2z7x_B 258 KLQGQLDFRDFDYSGTSLKALSIHQVVSDVF---GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334 (520)
T ss_dssp EEESCCCCCCCCCCSCCCCEEEEEEEEECCC---CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred cccCccccchhhcccccCceeEeccccccce---ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECC
Confidence 4544555554 4444444444444443 112 00 156778888888888
Q ss_pred CCCCCCC-CCCCCCCcCEEeccCCcCCC--cCCC-CCCCCCcCEEEccCCcCCCccc-hhccCCCCCCeEeeecccCCCc
Q 002158 265 NLQGAVP-DLSRIPNLYYLDLSWNHLTG--SIPS-KKLSENVTTIDLSDNYLNGSIL-ESISNLPFLQTLSLENNFLTGS 339 (958)
Q Consensus 265 ~l~~~~~-~l~~l~~L~~L~Ls~N~l~~--~~~~-~~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 339 (958)
++++..+ .+..+++|++|+|++|++++ .+|. ...+++|++|+|++|.+++.+| ..+..+++|++|+|++|++++.
T Consensus 335 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 335 LLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414 (520)
T ss_dssp CCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGG
T ss_pred ccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcc
Confidence 8887554 47888888888888888874 2222 3456788888888888887344 4577888888888888888877
Q ss_pred cchhhhcccccCccccceEeccCCCCCCCccCC-CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCC
Q 002158 340 IPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL-TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCP 418 (958)
Q Consensus 340 ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~ 418 (958)
+|..+. +.++.|+|++|+|+.++... .+++|+.|++++|++...+.. .+......+.+.+.+|+|.|+
T Consensus 415 ~~~~l~-------~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~----~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 415 IFRCLP-------PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPDG----IFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp GGGSCC-------TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCCTT----TTTTCTTCCEEECCSSCBCCC
T ss_pred hhhhhc-------ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCCccCHH----HhccCCcccEEECcCCCCccc
Confidence 776542 57889999999999999866 999999999999999753322 233445677899999999999
Q ss_pred CCCCCC-CCcccccCCC-CCCceeeeece
Q 002158 419 VQACPV-DNFFEYVPAS-PEPCFCAAPLR 445 (958)
Q Consensus 419 c~~~~~-~~~~~~~~~~-~~~~~c~sp~~ 445 (958)
|+..++ ..|++..... .....|++|.+
T Consensus 484 c~~~~~~~~~~~~~~~~~~~~~~C~~p~~ 512 (520)
T 2z7x_B 484 CPRIDYLSRWLNKNSQKEQGSAKCSGSGK 512 (520)
T ss_dssp HHHHHHHHHHHHHTTTTEESCCBBTTTCC
T ss_pred CCchHHHHHHHHhccccCCCCCCcCCccc
Confidence 999999 8999765543 23578988854
No 258
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-34 Score=330.98 Aligned_cols=360 Identities=16% Similarity=0.145 Sum_probs=284.4
Q ss_pred cCCCCCCCCCCCCCCceeeCc---cccC-----------CCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccC
Q 002158 58 LRNWNKGDPCMSNWTGVLCFD---TVET-----------DGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTG 123 (958)
Q Consensus 58 l~~W~~~~~c~~~w~gV~C~~---~~~~-----------~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~ 123 (958)
+++|.....|++.|.+..|.- .... ....+++.|++.++.+....+..+..+++|++|+++++...
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc
Confidence 578999999998766666621 1110 01246888999999888766666889999999999877666
Q ss_pred CCC-ccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhc
Q 002158 124 TIP-KEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELS 202 (958)
Q Consensus 124 ~ip-~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 202 (958)
.++ ..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++|++|+|++|.+++..+..+.
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 555 5799999999999999999988888899999999999999999955555578999999999999999988888899
Q ss_pred CCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEE
Q 002158 203 KLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYL 282 (958)
Q Consensus 203 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L 282 (958)
.+++|++|++++|++++. .+..+++|+.|++++|.++. +...++|+.|++++|.++..+... .++|+.|
T Consensus 163 ~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~------~~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L 231 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST------LAIPIAVEELDASHNSINVVRGPV--NVELTIL 231 (390)
T ss_dssp SCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE------EECCSSCSEEECCSSCCCEEECCC--CSSCCEE
T ss_pred CCCCCCEEECCCCcCCcc---ccccccccceeecccccccc------cCCCCcceEEECCCCeeeeccccc--cccccEE
Confidence 999999999999999865 35667899999999999863 234468999999999998775543 4799999
Q ss_pred eccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccC
Q 002158 283 DLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRN 362 (958)
Q Consensus 283 ~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~ 362 (958)
+|++|.+++ ++....+++|++|+|++|.+++..+..|..+++|++|+|++|++++ +|..+. ..+.|+.|+|++
T Consensus 232 ~l~~n~l~~-~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~-----~l~~L~~L~L~~ 304 (390)
T 3o6n_A 232 KLQHNNLTD-TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQ-----PIPTLKVLDLSH 304 (390)
T ss_dssp ECCSSCCCC-CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSS-----CCTTCCEEECCS
T ss_pred ECCCCCCcc-cHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccC-----CCCCCCEEECCC
Confidence 999999985 4666777999999999999999999999999999999999999984 555442 245788999999
Q ss_pred CCCCCCccCC-CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCCCceee
Q 002158 363 NSFSNIVGDL-TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPEPCFCA 441 (958)
Q Consensus 363 N~l~~l~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~~~~c~ 441 (958)
|+++.++... .+++|+.|++++|++.... +......+.+.+.+|+|.|+|...++..|-+...... ...|.
T Consensus 305 n~l~~~~~~~~~l~~L~~L~L~~N~i~~~~-------~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~-~~~c~ 376 (390)
T 3o6n_A 305 NHLLHVERNQPQFDRLENLYLDHNSIVTLK-------LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDA-DQHCK 376 (390)
T ss_dssp SCCCCCGGGHHHHTTCSEEECCSSCCCCCC-------CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCC-CSCCC
T ss_pred CcceecCccccccCcCCEEECCCCccceeC-------chhhccCCEEEcCCCCccchhHHHHHHHHHhhccccc-Cceec
Confidence 9999998776 8899999999999996542 2334566789999999999998877777765443332 34555
Q ss_pred ee
Q 002158 442 AP 443 (958)
Q Consensus 442 sp 443 (958)
.|
T Consensus 377 ~~ 378 (390)
T 3o6n_A 377 ID 378 (390)
T ss_dssp TT
T ss_pred cc
Confidence 44
No 259
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.1e-34 Score=318.20 Aligned_cols=226 Identities=22% Similarity=0.331 Sum_probs=180.9
Q ss_pred CCCCC-ceeeeeCCeEEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHH-HccCCCCcceEEEEEEe----CCeEEE
Q 002158 626 YFSSS-TQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLL-SRLHHRNLVSLLGYCDE----EGEQML 698 (958)
Q Consensus 626 ~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~~l 698 (958)
+|... +.||+|+||.||+|... +++.||||++.. ...+.+|++++ +..+||||+++++++.. ....++
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 44444 67999999999999985 689999999964 23567899888 55689999999999977 678899
Q ss_pred EEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecC---CCCeEEeeeeeecc
Q 002158 699 VYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDS---NLNAKVADFGLSRL 775 (958)
Q Consensus 699 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~---~~~~kl~DFGla~~ 775 (958)
||||+++|+|.+++.......+++.++..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 999999999999998776567999999999999999999999999 999999999999998 78899999999864
Q ss_pred cccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhh
Q 002158 776 APVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSI 855 (958)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 855 (958)
.. +..++.++|||||||++|||++|+.||......... ......
T Consensus 170 ~~-----------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------~~~~~~ 213 (299)
T 3m2w_A 170 TT-----------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------PGMKTR 213 (299)
T ss_dssp CT-----------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------CCSCCS
T ss_pred cc-----------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------HHHHHH
Confidence 31 234678999999999999999999999653321100 000011
Q ss_pred hcccCCCCC----hHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002158 856 IDNRMGSYP----SECVERFVTLALRCCHDKPEHRPSMSDVVRE 895 (958)
Q Consensus 856 i~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 895 (958)
+.......+ ..++..+.+++.+||+.||++||+++|++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 214 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 111111222 2356789999999999999999999999975
No 260
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.9e-35 Score=360.32 Aligned_cols=322 Identities=31% Similarity=0.491 Sum_probs=257.1
Q ss_pred eeEEEEccCCcCCCCcccc-ccCCCCcceeeccCc-ccCCCCccccC---------------------------CCCCcE
Q 002158 87 HVRELQLLSMNLSGNLAPE-LGQLSRLQYYFMWND-LTGTIPKEIGN---------------------------ISSLIF 137 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~-l~~L~~L~~L~l~n~-~~~~ip~~i~~---------------------------l~~L~~ 137 (958)
.++.|+|.+|.++|.+|.. ++.+++|++|++++| +.+.+|..+.+ +++|++
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 5677777777777666655 677777777766543 33455554443 456677
Q ss_pred EEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCcc
Q 002158 138 LLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNL 217 (958)
Q Consensus 138 L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 217 (958)
|+|++|.+++.+|..+.++++|++|+|++|++++.+|..+..+++|+.|+|++|.+++.+|..+..+++|++|+|++|++
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 77777777777888888888899999999999888888898999999999999999988898899999999999999999
Q ss_pred ccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCCC
Q 002158 218 SGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPSK 296 (958)
Q Consensus 218 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~ 296 (958)
++.+|..+..+++|++|+|++|+++ ..+|..++++++|+.|+|++|++++..| .+..+++|+.|+|++|+++|.+|..
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLT-GEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCC-SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccC-CcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 9888999999999999999999997 4678899999999999999999988777 4889999999999999988776642
Q ss_pred C-----------------------------------------------------------------------CCCCcCEE
Q 002158 297 K-----------------------------------------------------------------------LSENVTTI 305 (958)
Q Consensus 297 ~-----------------------------------------------------------------------~~~~L~~L 305 (958)
. .+++|+.|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 1 13578999
Q ss_pred EccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCC-CccCC-CCCCcceEEeC
Q 002158 306 DLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSN-IVGDL-TLPNNVTLRLG 383 (958)
Q Consensus 306 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~-l~~~~-~l~~L~~L~l~ 383 (958)
||++|++++.+|..|+++++|+.|+|++|+++|.+|..+..+.. |+.|||++|+++. +|... .++.|+.|+++
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~-----L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls 712 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG-----LNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT-----CCEEECCSSCCEECCCGGGGGCCCCSEEECC
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCC-----CCEEECCCCcccCcCChHHhCCCCCCEEECc
Confidence 99999999999999999999999999999999999999987654 5599999999995 56555 89999999999
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCccccccCCCCCC
Q 002158 384 GNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPV 419 (958)
Q Consensus 384 ~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c 419 (958)
+|+++.. +|....+. ......+.||+.-|.-
T Consensus 713 ~N~l~g~--iP~~~~~~---~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 713 NNNLSGP--IPEMGQFE---TFPPAKFLNNPGLCGY 743 (768)
T ss_dssp SSEEEEE--CCSSSSGG---GSCGGGGCSCTEEEST
T ss_pred CCccccc--CCCchhhc---cCCHHHhcCCchhcCC
Confidence 9998642 22222221 1123456678777753
No 261
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.8e-35 Score=358.32 Aligned_cols=240 Identities=20% Similarity=0.356 Sum_probs=194.1
Q ss_pred cCCCCCceeeeeCCeEEEEEEEC--CCcEEEEEEeccC-ChhcHHHHHHHHHHHHccCCCCcceEEEEEEeCCe-----E
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILS--DNTTVAIKRAEEG-SLQGQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGE-----Q 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~ 696 (958)
++|.+.+.||+|+||+||+|.+. +++.||||++... .......|.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 56888899999999999999986 5899999998654 34445678999999999999999999999987665 7
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
|+||||+++++|.+++.. .+++.+++.++.|+++||+|||+++ |+||||||+|||++.+ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhc
Confidence 999999999999998754 4899999999999999999999999 9999999999999985 8999999999864
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhh
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPISHGKNIVREVNVARDSGMVFSII 856 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i 856 (958)
... ....||++|+|||++.+.. +.++|||||||++|||++|..||..... ...
T Consensus 232 ~~~-----------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~----- 284 (681)
T 2pzi_A 232 NSF-----------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------DGL----- 284 (681)
T ss_dssp TCC-----------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSC-----
T ss_pred ccC-----------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc----------ccc-----
Confidence 321 2346999999999997664 8899999999999999999988753110 000
Q ss_pred cccCCCCChHHHHHHHHHHHHccccCCCCCCC-HHHHHHHHHHhHh
Q 002158 857 DNRMGSYPSECVERFVTLALRCCHDKPEHRPS-MSDVVRELENILK 901 (958)
Q Consensus 857 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~~~~ 901 (958)
.. .......+..+.+++.+||+.||++||+ ++++.+.|..+++
T Consensus 285 ~~--~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 285 PE--DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp CT--TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred cc--cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 00 0001234567899999999999999995 6666677776653
No 262
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.3e-34 Score=347.99 Aligned_cols=327 Identities=21% Similarity=0.256 Sum_probs=286.3
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccc
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDE 166 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 166 (958)
.++.|++++|.+++..+..++.+++|+.|++++|....+|..+.++++|++|+|++|.+++..|..+..+++|++|++++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 334 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKG 334 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCS
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCC
Confidence 79999999999999888889999999999999888889999999999999999999999988888999999999999999
Q ss_pred ccccccCcc-ccccccccceEecccccccccC--chhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC
Q 002158 167 NNITGTIPK-SFANLSRVRHLHLNNNSIGGQI--PSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA 243 (958)
Q Consensus 167 N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 243 (958)
|.+.+.++. .+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..+..|..+++|++|++++|+++.
T Consensus 335 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 414 (606)
T 3t6q_A 335 NTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV 414 (606)
T ss_dssp CSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEEC
T ss_pred CCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCC
Confidence 999977765 4899999999999999999665 7789999999999999999999999999999999999999999985
Q ss_pred CCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCc-CC---CCCCCCCcCEEEccCCcCCCccch
Q 002158 244 SEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGS-IP---SKKLSENVTTIDLSDNYLNGSILE 318 (958)
Q Consensus 244 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~-~~---~~~~~~~L~~L~Ls~N~l~~~~~~ 318 (958)
...+..+.++++|+.|++++|.+++.++. +..+++|++|+|++|++++. ++ ....+++|++|+|++|++++..|.
T Consensus 415 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 494 (606)
T 3t6q_A 415 KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQH 494 (606)
T ss_dssp CTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTT
T ss_pred cccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChh
Confidence 44455699999999999999999988775 89999999999999999862 22 235568999999999999999999
Q ss_pred hccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCC
Q 002158 319 SISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNT 396 (958)
Q Consensus 319 ~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~ 396 (958)
.|..+++|++|+|++|++++..|..+..+ ..+ .|+|++|+++.++... .+++|+.|++++|||
T Consensus 495 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-----~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~--------- 559 (606)
T 3t6q_A 495 AFTSLKMMNHVDLSHNRLTSSSIEALSHL-----KGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPL--------- 559 (606)
T ss_dssp TTTTCTTCCEEECCSSCCCGGGGGGGTTC-----CSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCE---------
T ss_pred hhccccCCCEEECCCCccCcCChhHhCcc-----ccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCc---------
Confidence 99999999999999999999888887654 345 8999999999987764 788999999999888
Q ss_pred CcccccCCCCCccccccCCCCCCCCCCCCCcccccCCC---CCCceeeeeceee
Q 002158 397 GRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPAS---PEPCFCAAPLRIG 447 (958)
Q Consensus 397 ~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~---~~~~~c~sp~~~~ 447 (958)
.|+|+..++..|++..... .....|++|...+
T Consensus 560 -------------------~c~c~~~~~~~w~~~~~~~~~~~~~~~C~~p~~~~ 594 (606)
T 3t6q_A 560 -------------------DCTCSNIYFLEWYKENMQKLEDTEDTLCENPPLLR 594 (606)
T ss_dssp -------------------ECSGGGHHHHHHHHHCGGGEECGGGCBEEESGGGT
T ss_pred -------------------cccCCcHHHHHHHHhCcccccCCCCCeeCCchHhC
Confidence 6777777788888654322 2347899997644
No 263
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.3e-35 Score=348.58 Aligned_cols=369 Identities=18% Similarity=0.200 Sum_probs=240.2
Q ss_pred CCCCCceeeCcc------ccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCC-CCccccCCCCCcEEEe
Q 002158 68 MSNWTGVLCFDT------VETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGT-IPKEIGNISSLIFLLL 140 (958)
Q Consensus 68 ~~~w~gV~C~~~------~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~-ip~~i~~l~~L~~L~L 140 (958)
.|.|.|+ |+.. .+.....+++.|+|++|++++..+..|+++++|++|++++|.... .|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 3578888 7432 222334589999999999999999999999999999998665554 4578999999999999
Q ss_pred eCCCCCCCCChhhcCCCCCCEEecccccccc-cCccccccccccceEecccccccccC-chhhcCCccchhhhccCCccc
Q 002158 141 NGNKLSGSLPDELGYLSNLNRLQVDENNITG-TIPKSFANLSRVRHLHLNNNSIGGQI-PSELSKLSTLIHLLVDNNNLS 218 (958)
Q Consensus 141 s~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~ 218 (958)
++|.+++..|..|+++++|++|+|++|++++ ..|..+.++++|++|++++|.+.+.+ +..+.++++|++|++++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998777789999999999999999996 36778999999999999999944445 468999999999999999999
Q ss_pred cCCCcccCCC------------------------CCccEEEccCCCCCCCCc----------------------------
Q 002158 219 GNLPPELSEL------------------------PQLCILQLDNNNFSASEI---------------------------- 246 (958)
Q Consensus 219 ~~~~~~l~~l------------------------~~L~~L~L~~N~l~~~~~---------------------------- 246 (958)
+..|..+..+ ++|++|++++|++++...
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred ccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 8888877654 556666666666543100
Q ss_pred --------------------------------------------------------------------------------
Q 002158 247 -------------------------------------------------------------------------------- 246 (958)
Q Consensus 247 -------------------------------------------------------------------------------- 246 (958)
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~ 321 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSK 321 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSC
T ss_pred HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCc
Confidence
Q ss_pred ----cccc-cCCCCCCEEEcccCCCCCCCC----CCCCCCCcCEEeccCCcCCCcCC---CCCCCCCcCEEEccCCcCCC
Q 002158 247 ----PATY-GNFSKLVKLSLRNCNLQGAVP----DLSRIPNLYYLDLSWNHLTGSIP---SKKLSENVTTIDLSDNYLNG 314 (958)
Q Consensus 247 ----p~~~-~~l~~L~~L~L~~N~l~~~~~----~l~~l~~L~~L~Ls~N~l~~~~~---~~~~~~~L~~L~Ls~N~l~~ 314 (958)
|..+ .++++|+.|+|++|++++..+ .+..+++|++|+|++|++++..+ ....+++|++|+|++|+|+
T Consensus 322 l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~- 400 (549)
T 2z81_A 322 VFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH- 400 (549)
T ss_dssp CCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-
T ss_pred cccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-
Confidence 0000 123334444444444433211 13334444444444444432111 0223344555555555554
Q ss_pred ccchhccCCCCCCeEeeecccCCCccchhhhc-ccc------------cCccccceEeccCCCCCCCccCCCCCCcceEE
Q 002158 315 SILESISNLPFLQTLSLENNFLTGSIPATIWQ-NKS------------FSTKARLKIDLRNNSFSNIVGDLTLPNNVTLR 381 (958)
Q Consensus 315 ~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~-~~~------------~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~ 381 (958)
.+|..+..+++|++|+|++|+|+ .+|..+.. +.. ...+.|+.|+|++|+|+.++....+++|+.|+
T Consensus 401 ~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~ip~~~~l~~L~~L~ 479 (549)
T 2z81_A 401 PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMK 479 (549)
T ss_dssp CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCGGGCTTCCEEE
T ss_pred cCChhhcccccccEEECCCCCcc-cccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCcCCCcccCccCCEEe
Confidence 23444444455555555555544 22222110 000 02345667777777777776655677777777
Q ss_pred eCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCC-CCCCCCcccccCCCC-CCceeeee
Q 002158 382 LGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQ-ACPVDNFFEYVPASP-EPCFCAAP 443 (958)
Q Consensus 382 l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~-~~~~~~~~~~~~~~~-~~~~c~sp 443 (958)
|++|++..... ..+......+.+.+.+|+|.|+|+ ..++..|++...... +...|++|
T Consensus 480 Ls~N~l~~~~~----~~~~~l~~L~~L~l~~N~~~~~~~~~~~l~~~l~~~~~~~~~~~~C~~~ 539 (549)
T 2z81_A 480 ISRNQLKSVPD----GIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGS 539 (549)
T ss_dssp CCSSCCCCCCT----TGGGGCTTCCEEECCSSCBCCCHHHHHHHHHHHHHCTTTEESCCBBTTT
T ss_pred cCCCccCCcCH----HHHhcCcccCEEEecCCCccCCCccHHHHHHHHHhcccccCCCCeECCC
Confidence 77777753221 123344566789999999999999 566667886543332 23667766
No 264
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.7e-34 Score=343.13 Aligned_cols=362 Identities=15% Similarity=0.145 Sum_probs=292.1
Q ss_pred cccCCCCCCCCCCCC---CCceeeCccccC-----------CCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcc
Q 002158 56 NHLRNWNKGDPCMSN---WTGVLCFDTVET-----------DGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDL 121 (958)
Q Consensus 56 ~~l~~W~~~~~c~~~---w~gV~C~~~~~~-----------~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~ 121 (958)
..+++|..+..|+.. |.++.|...... ....+++.|++.++.+....+..+..+++|+.|++++|.
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~ 86 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 86 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSC
T ss_pred ccccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCC
Confidence 457899988888865 555554321111 012357888999998888777778999999999998665
Q ss_pred cCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchh
Q 002158 122 TGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSE 200 (958)
Q Consensus 122 ~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 200 (958)
...+ |..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..
T Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 166 (597)
T 3oja_B 87 IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT 166 (597)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred CCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhh
Confidence 5555 458999999999999999999888888999999999999999999666666899999999999999999888889
Q ss_pred hcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcC
Q 002158 201 LSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLY 280 (958)
Q Consensus 201 l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~ 280 (958)
|.++++|+.|+|++|++++.. +..+++|+.|++++|.++. +...++|+.|++++|.++..+..+. ++|+
T Consensus 167 ~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~------l~~~~~L~~L~ls~n~l~~~~~~~~--~~L~ 235 (597)
T 3oja_B 167 FQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST------LAIPIAVEELDASHNSINVVRGPVN--VELT 235 (597)
T ss_dssp TTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE------EECCTTCSEEECCSSCCCEEECSCC--SCCC
T ss_pred hhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc------ccCCchhheeeccCCcccccccccC--CCCC
Confidence 999999999999999998753 5667899999999999863 3445689999999999987766543 6899
Q ss_pred EEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEec
Q 002158 281 YLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDL 360 (958)
Q Consensus 281 ~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~L 360 (958)
.|+|++|.+++ ++....+++|+.|+|++|.|++..|..|..+++|+.|+|++|.+++ +|..+.. .+.|+.|+|
T Consensus 236 ~L~L~~n~l~~-~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~-----l~~L~~L~L 308 (597)
T 3oja_B 236 ILKLQHNNLTD-TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQP-----IPTLKVLDL 308 (597)
T ss_dssp EEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSC-----CTTCCEEEC
T ss_pred EEECCCCCCCC-ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCccccc-----CCCCcEEEC
Confidence 99999999995 4666778999999999999999999999999999999999999995 5655432 456789999
Q ss_pred cCCCCCCCccCC-CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCCCce
Q 002158 361 RNNSFSNIVGDL-TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPEPCF 439 (958)
Q Consensus 361 s~N~l~~l~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~~~~ 439 (958)
++|+++.++... .+++|+.|+|++|++.... +........+.|.+|+|.|+|...++..|........ ...
T Consensus 309 s~N~l~~i~~~~~~l~~L~~L~L~~N~l~~~~-------~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~-~~~ 380 (597)
T 3oja_B 309 SHNHLLHVERNQPQFDRLENLYLDHNSIVTLK-------LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDA-DQH 380 (597)
T ss_dssp CSSCCCCCGGGHHHHTTCSEEECCSSCCCCCC-------CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCC-CCC
T ss_pred CCCCCCccCcccccCCCCCEEECCCCCCCCcC-------hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccc-ccc
Confidence 999999998776 8999999999999996542 2333466789999999999998877777665433322 244
Q ss_pred eeee
Q 002158 440 CAAP 443 (958)
Q Consensus 440 c~sp 443 (958)
|..+
T Consensus 381 C~~~ 384 (597)
T 3oja_B 381 CKID 384 (597)
T ss_dssp CCTT
T ss_pred CCcc
Confidence 5543
No 265
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.2e-34 Score=345.31 Aligned_cols=367 Identities=19% Similarity=0.185 Sum_probs=275.8
Q ss_pred CceeeCc----cccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCC-ccccCCCCCcEEEeeCCCCC
Q 002158 72 TGVLCFD----TVETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIP-KEIGNISSLIFLLLNGNKLS 146 (958)
Q Consensus 72 ~gV~C~~----~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip-~~i~~l~~L~~L~Ls~n~l~ 146 (958)
..|.|.. .++.+-+..++.|||++|+|++..+.+|.++++|++|++++|.+..+| .+|.++++|++|+|++|+|+
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 3567854 234444568999999999999988889999999999999987776665 46999999999999999999
Q ss_pred CCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccc-cCchhhcCCccchhhhccCCccccCCCccc
Q 002158 147 GSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGG-QIPSELSKLSTLIHLLVDNNNLSGNLPPEL 225 (958)
Q Consensus 147 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l 225 (958)
+..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|.+++ ..|..+..+++|++|+|++|+|++..+..|
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 7667789999999999999999998777889999999999999999985 467888999999999999998876544333
Q ss_pred CCCC----------------------------------------------------------------------------
Q 002158 226 SELP---------------------------------------------------------------------------- 229 (958)
Q Consensus 226 ~~l~---------------------------------------------------------------------------- 229 (958)
..+.
T Consensus 194 ~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~ 273 (635)
T 4g8a_A 194 RVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 273 (635)
T ss_dssp HHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTT
T ss_pred cchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccc
Confidence 2111
Q ss_pred -------------------------------------------------------CccEEEccCCCCCCCC---------
Q 002158 230 -------------------------------------------------------QLCILQLDNNNFSASE--------- 245 (958)
Q Consensus 230 -------------------------------------------------------~L~~L~L~~N~l~~~~--------- 245 (958)
+|+.|++.+|.+....
T Consensus 274 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~ 353 (635)
T 4g8a_A 274 ALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKR 353 (635)
T ss_dssp TTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCE
T ss_pred ccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhh
Confidence 1222222222221100
Q ss_pred ---------ccccccCCCCCCEEEcccCCCC-------------------------------------------------
Q 002158 246 ---------IPATYGNFSKLVKLSLRNCNLQ------------------------------------------------- 267 (958)
Q Consensus 246 ---------~p~~~~~l~~L~~L~L~~N~l~------------------------------------------------- 267 (958)
.+.....+++|+.|++++|.+.
T Consensus 354 l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~ 433 (635)
T 4g8a_A 354 LTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK 433 (635)
T ss_dssp EEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEE
T ss_pred cccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccc
Confidence 0001112445556666555542
Q ss_pred CCCC--CCCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcC-CCccchhccCCCCCCeEeeecccCCCccchh
Q 002158 268 GAVP--DLSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYL-NGSILESISNLPFLQTLSLENNFLTGSIPAT 343 (958)
Q Consensus 268 ~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~ 343 (958)
...+ .+..+++|+.++++.|.+.+..+.. ..++.|+.|+|++|.+ .+..|..|..+++|++|+|++|+|++..|..
T Consensus 434 ~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~ 513 (635)
T 4g8a_A 434 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 513 (635)
T ss_dssp STTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHH
Confidence 2222 2556677777788888877655544 4458999999999985 5568889999999999999999999877777
Q ss_pred hhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCCcccc-cCCCCCccccccCCCCCCC
Q 002158 344 IWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTGRFCG-SDAGGDETLTNSKVNCPVQ 420 (958)
Q Consensus 344 l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~-~~~~~~~~L~~n~~~C~c~ 420 (958)
+..+. .|+.|+|++|+|+.++... .+++|+.|+|++|.+...... .+.. ....+.+.|.+|||.|||+
T Consensus 514 f~~l~-----~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~----~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 514 FNSLS-----SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ----ELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTTCT-----TCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSS----CTTCCCTTCCEEECTTCCBCCSGG
T ss_pred HcCCC-----CCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHH----HHHhhhCcCCEEEeeCCCCcccCC
Confidence 76543 5669999999999998764 899999999999999754321 1111 1356778999999999999
Q ss_pred CCCCCCcccccCCCC---CCceeeeeceee
Q 002158 421 ACPVDNFFEYVPASP---EPCFCAAPLRIG 447 (958)
Q Consensus 421 ~~~~~~~~~~~~~~~---~~~~c~sp~~~~ 447 (958)
..++..|++...... +..+|++|...+
T Consensus 585 ~~~~~~wl~~~~~~~~~~~~~~C~~P~~~~ 614 (635)
T 4g8a_A 585 HQSFLQWIKDQRQLLVEVERMECATPSDKQ 614 (635)
T ss_dssp GHHHHHHHHHTTTTBSCGGGCBBCSSTTTT
T ss_pred cHHHHHHHHhCCCccCCCCCceeCCchHHC
Confidence 999999997765443 247899997654
No 266
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.9e-35 Score=327.52 Aligned_cols=244 Identities=18% Similarity=0.183 Sum_probs=186.4
Q ss_pred HcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCC--------hhcHHHHHHHHHHHHccC---------CCCcceE
Q 002158 624 TAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGS--------LQGQNEFLTEIKLLSRLH---------HRNLVSL 686 (958)
Q Consensus 624 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~l 686 (958)
.++|...+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 34677889999999999999998 78999999987642 223467889999999885 8888888
Q ss_pred EEEEE------------------------------eCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHH
Q 002158 687 LGYCD------------------------------EEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGI 736 (958)
Q Consensus 687 ~~~~~------------------------------~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL 736 (958)
.+++. ..+..++||||+++|++.+.+.. ..+++.++..++.|++.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 88753 26789999999999977666643 3489999999999999999
Q ss_pred HHhh-hcCCCCeeccCCCccceEecCCC--------------------CeEEeeeeeecccccCCCCCCccceeeeeccC
Q 002158 737 LYLH-TEAHPPVFHRDIKASNILLDSNL--------------------NAKVADFGLSRLAPVLDDEGTMPTHVSTIVKG 795 (958)
Q Consensus 737 ~yLH-~~~~~~iiH~Dikp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~g 795 (958)
+||| +.+ |+||||||+|||++.++ .+||+|||+|+.... ....|
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------~~~~g 239 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------GIVVF 239 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------------TEEEC
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------------CcEEE
Confidence 9999 899 99999999999999887 899999999986531 12469
Q ss_pred CCCccChhhhccCCCCCcchhhhHHHH-HHHHHhCCCCCCCCchhHHHHHHHhhcCcchhhhcccCCCCChHHHHHHHHH
Q 002158 796 TPGYLDPEYFLTHKLTDKSDVYSLGVV-LLELLTGMQPISHGKNIVREVNVARDSGMVFSIIDNRMGSYPSECVERFVTL 874 (958)
Q Consensus 796 t~~y~aPE~~~~~~~~~~~DV~S~Gv~-l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~l 874 (958)
|+.|+|||++.+.. +.++||||+|++ .+++++|..||.................... .......+..++.++.++
T Consensus 240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~dl 315 (336)
T 2vuw_A 240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK---TKCNTPAMKQIKRKIQEF 315 (336)
T ss_dssp CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS---SCCCSHHHHHHHHHHHHH
T ss_pred eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccC---cccchhhhhhcCHHHHHH
Confidence 99999999998766 889999998777 7888899999843111000110100000000 000011234688899999
Q ss_pred HHHccccCCCCCCCHHHHH-HH
Q 002158 875 ALRCCHDKPEHRPSMSDVV-RE 895 (958)
Q Consensus 875 i~~cl~~dP~~RPs~~evl-~~ 895 (958)
+.+||+.| |++|++ ++
T Consensus 316 i~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 316 HRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHGGGSS-----SHHHHHHHC
T ss_pred HHHHhccC-----CHHHHHhcC
Confidence 99999976 899888 53
No 267
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-32 Score=335.65 Aligned_cols=351 Identities=21% Similarity=0.249 Sum_probs=249.1
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCcccC------CCCc----cccCCCCCcEEEeeCCCCCCCCChhhcCC
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTG------TIPK----EIGNISSLIFLLLNGNKLSGSLPDELGYL 156 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~------~ip~----~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l 156 (958)
+++.|+|.+|.+.+..+..+..+++|+.|.++++..+ .+|. .|..+++|++|+|++|.+++..+..|..+
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 352 (680)
T 1ziw_A 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL 352 (680)
T ss_dssp TCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTC
T ss_pred cccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccc
Confidence 3444444444444444444444444444444433322 2332 45566667777777777776666667777
Q ss_pred CCCCEEeccccccccc--Cccccccc--cccceEecccccccccCchhhcCCccchhhhccCCccccCCC-cccCCCCCc
Q 002158 157 SNLNRLQVDENNITGT--IPKSFANL--SRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLP-PELSELPQL 231 (958)
Q Consensus 157 ~~L~~L~L~~N~l~~~--~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L 231 (958)
++|++|++++|.+... ....|..+ ++|+.|+|++|++++..|..|..+++|+.|+|++|++++.++ ..+.++++|
T Consensus 353 ~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 432 (680)
T 1ziw_A 353 INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI 432 (680)
T ss_dssp TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTC
T ss_pred cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccc
Confidence 7777777777764422 12223332 467788888888888888999999999999999999987655 789999999
Q ss_pred cEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCC--CCC-CCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEc
Q 002158 232 CILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQG--AVP-DLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDL 307 (958)
Q Consensus 232 ~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~-~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~L 307 (958)
++|++++|+++ ...+..|..+++|+.|++++|.+++ ..+ .+..+++|+.|+|++|++++..+. ...+++|++|+|
T Consensus 433 ~~L~Ls~n~l~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L 511 (680)
T 1ziw_A 433 FEIYLSYNKYL-QLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDL 511 (680)
T ss_dssp CEEECCSCSEE-ECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cEEecCCCCcc-eeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeC
Confidence 99999999997 3557789999999999999999873 333 589999999999999999966554 356799999999
Q ss_pred cCCcCCCccc--------hhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCc
Q 002158 308 SDNYLNGSIL--------ESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNN 377 (958)
Q Consensus 308 s~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L 377 (958)
++|++++..+ ..|.++++|+.|+|++|+|+ .+|...+. ..+.|+.|+|++|+|+.++... .+++|
T Consensus 512 s~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~----~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 586 (680)
T 1ziw_A 512 QHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFK----DLFELKIIDLGLNNLNTLPASVFNNQVSL 586 (680)
T ss_dssp CSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTT----TCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcc----cccCcceeECCCCCCCcCCHhHhCCCCCC
Confidence 9999987533 34789999999999999999 67765432 1346779999999999998875 88999
Q ss_pred ceEEeCCCCCCCCCCCCCCCccc-ccCCCCCccccccCCCCCCCC-CCCCCcccccCCCC----CCceeeeeceee
Q 002158 378 VTLRLGGNPICTSANIPNTGRFC-GSDAGGDETLTNSKVNCPVQA-CPVDNFFEYVPASP----EPCFCAAPLRIG 447 (958)
Q Consensus 378 ~~L~l~~N~l~~~~~~~~~~~~~-~~~~~~~~~L~~n~~~C~c~~-~~~~~~~~~~~~~~----~~~~c~sp~~~~ 447 (958)
+.|+|++|.++.... ..+- .......+.+.+|||.|+|+. .++..|++...... ....|++|+..+
T Consensus 587 ~~L~L~~N~l~~~~~----~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~C~~p~~~~ 658 (680)
T 1ziw_A 587 KSLNLQKNLITSVEK----KVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYH 658 (680)
T ss_dssp CEEECTTSCCCBCCH----HHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCSSCC--------------------
T ss_pred CEEECCCCcCCccCh----hHhcccccccCEEEccCCCcccCCccHHHHHHHHHhcCcccccccCCcEECCchHHC
Confidence 999999999865321 0111 235567889999999999996 99999997654432 246899998755
No 268
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-33 Score=334.55 Aligned_cols=352 Identities=17% Similarity=0.176 Sum_probs=228.6
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEe
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQ 163 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 163 (958)
..+++.|+|++|++++..+..|.++++|+.|++++|....+ |..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 34566777777777666666667777777776665544333 34566666666666666666655555666666666666
Q ss_pred cccccccccCccccccccccceEecccccccc-cCchhhcCCccchhhhccCCccccCCCcc------------------
Q 002158 164 VDENNITGTIPKSFANLSRVRHLHLNNNSIGG-QIPSELSKLSTLIHLLVDNNNLSGNLPPE------------------ 224 (958)
Q Consensus 164 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~------------------ 224 (958)
+++|++++..+..++++++|++|+|++|.+++ .+|..|.++++|++|++++|++++..+..
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 66666664444455666666666666666654 24555666666666655555544322211
Q ss_pred --------------------------------------------------------------------------------
Q 002158 225 -------------------------------------------------------------------------------- 224 (958)
Q Consensus 225 -------------------------------------------------------------------------------- 224 (958)
T Consensus 187 n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence
Q ss_pred -----------cCCCCCccEE-----------------------------------------------------------
Q 002158 225 -----------LSELPQLCIL----------------------------------------------------------- 234 (958)
Q Consensus 225 -----------l~~l~~L~~L----------------------------------------------------------- 234 (958)
+..+++|+.|
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~ 346 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 346 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccC
Confidence 1112223333
Q ss_pred ------EccCCCCCCC-CccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCC--CCCCCCCcCEE
Q 002158 235 ------QLDNNNFSAS-EIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIP--SKKLSENVTTI 305 (958)
Q Consensus 235 ------~L~~N~l~~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~~~~L~~L 305 (958)
++++|+++.. ..+..+.++++|+.|++++|.+++.++.+..+++|+.|++++|.+.+..+ ....+++|++|
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 3333333210 00233444555555555555555554446677888888888888876555 23456899999
Q ss_pred EccCCcCCCccchhccCCCCCCeEeeecccCC-CccchhhhcccccCccccceEeccCCCCCCCcc-CC-CCCCcceEEe
Q 002158 306 DLSDNYLNGSILESISNLPFLQTLSLENNFLT-GSIPATIWQNKSFSTKARLKIDLRNNSFSNIVG-DL-TLPNNVTLRL 382 (958)
Q Consensus 306 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~-~~-~l~~L~~L~l 382 (958)
+|++|.+++..+..|.++++|++|+|++|.++ +.+|..+..+ +.|+.|+|++|+++++.. .. .+++|+.|++
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 501 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL-----RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC-----TTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcc-----cCCCEEECCCCccccCChhhhhcccCCCEEeC
Confidence 99999999888999999999999999999997 5788766554 456799999999999844 44 8999999999
Q ss_pred CCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCC-CcccccCCCCC-Cceeeeece
Q 002158 383 GGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVD-NFFEYVPASPE-PCFCAAPLR 445 (958)
Q Consensus 383 ~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~-~~~~~~~~~~~-~~~c~sp~~ 445 (958)
++|.+..... ..+......+.+.+.+|+|.|+|+..++. .|++....... ...|++|.+
T Consensus 502 ~~n~l~~~~~----~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~~C~~~~~ 562 (570)
T 2z63_A 502 ASNQLKSVPD----GIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSGK 562 (570)
T ss_dssp CSSCCSCCCT----TTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCCBBTTTCC
T ss_pred CCCcCCCCCH----HHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCchhhCCCCC
Confidence 9999976432 12333456678999999999999998887 89876432221 237877743
No 269
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-32 Score=330.95 Aligned_cols=313 Identities=19% Similarity=0.277 Sum_probs=269.3
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCc--ccC-CCCccccCC------CCCcEEEeeCCCCCCCCCh--hh
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWND--LTG-TIPKEIGNI------SSLIFLLLNGNKLSGSLPD--EL 153 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~--~~~-~ip~~i~~l------~~L~~L~Ls~n~l~~~~p~--~l 153 (958)
..+++.|+|++|++.+.+|..++++++|+.|++++| +.| .+|..++++ ++|++|+|++|.++ .+|. .+
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 347999999999999999999999999999999866 666 799999887 99999999999999 8998 99
Q ss_pred cCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCcc-chhhhccCCccccCCCcccCCCC--C
Q 002158 154 GYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLST-LIHLLVDNNNLSGNLPPELSELP--Q 230 (958)
Q Consensus 154 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~~~~l~~l~--~ 230 (958)
+++++|++|+|++|+++|.+| .|..+++|++|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~ 403 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSV 403 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSC
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCc
Confidence 999999999999999999999 9999999999999999999 88989999999 999999999999 7888887765 9
Q ss_pred ccEEEccCCCCCCCCcccccc-------CCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCCC-C-
Q 002158 231 LCILQLDNNNFSASEIPATYG-------NFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKLS-E- 300 (958)
Q Consensus 231 L~~L~L~~N~l~~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~-~- 300 (958)
|++|++++|+++ ...|..+. .+++|+.|+|++|+++..++. +..+++|++|+|++|+++ .+|...+. .
T Consensus 404 L~~L~Ls~N~l~-~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~ 481 (636)
T 4eco_A 404 MSAIDFSYNEIG-SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDEN 481 (636)
T ss_dssp EEEEECCSSCTT-TTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETT
T ss_pred cCEEECcCCcCC-CcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcccc
Confidence 999999999998 46677777 788999999999999977665 567899999999999999 66654332 2
Q ss_pred -------CcCEEEccCCcCCCccchhcc--CCCCCCeEeeecccCCCccchhhhcccccCccccceEecc------CCCC
Q 002158 301 -------NVTTIDLSDNYLNGSILESIS--NLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLR------NNSF 365 (958)
Q Consensus 301 -------~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls------~N~l 365 (958)
+|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..++.+ +.|+.|+|+ +|++
T Consensus 482 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l-----~~L~~L~Ls~N~~ls~N~l 554 (636)
T 4eco_A 482 ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNS-----STLKGFGIRNQRDAQGNRT 554 (636)
T ss_dssp EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC-----SSCCEEECCSCBCTTCCBC
T ss_pred ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcC-----CCCCEEECCCCcccccCcc
Confidence 8999999999999 6777776 99999999999999997 89988765 456699995 4655
Q ss_pred CC-CccCC-CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCC
Q 002158 366 SN-IVGDL-TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNC 417 (958)
Q Consensus 366 ~~-l~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C 417 (958)
.. ++... .+++|+.|+|++|++...+ .. +. .....+.|.+|++.|
T Consensus 555 ~~~~p~~l~~l~~L~~L~Ls~N~l~~ip---~~--~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 555 LREWPEGITLCPSLTQLQIGSNDIRKVN---EK--IT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCCCBCC---SC--CC--TTCCEEECCSCTTCE
T ss_pred cccChHHHhcCCCCCEEECCCCcCCccC---Hh--Hh--CcCCEEECcCCCCcc
Confidence 54 55555 8999999999999994432 21 11 567888899998865
No 270
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.98 E-value=8e-32 Score=325.72 Aligned_cols=215 Identities=16% Similarity=0.145 Sum_probs=168.1
Q ss_pred chhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCcc-ccccCCCCCCEEEcccCCCCCCCCC-CCC
Q 002158 198 PSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIP-ATYGNFSKLVKLSLRNCNLQGAVPD-LSR 275 (958)
Q Consensus 198 p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~-l~~ 275 (958)
|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|+++. ..+ ..+.++++|+.|++++|++++..+. +..
T Consensus 369 ~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 446 (606)
T 3vq2_A 369 SYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKR-VTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLG 446 (606)
T ss_dssp CHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEES-TTTTTTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred hhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCC-ccChhhhhccccCCEEECcCCCCCccchhhhcC
Confidence 3344444555555555555553 34667778888888888888864 334 6889999999999999999987775 899
Q ss_pred CCCcCEEeccCCcCCCc-CCC-CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCcc
Q 002158 276 IPNLYYLDLSWNHLTGS-IPS-KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTK 353 (958)
Q Consensus 276 l~~L~~L~Ls~N~l~~~-~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~ 353 (958)
+++|++|+|++|.+++. +|. ...+++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..+..+.
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~----- 521 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLY----- 521 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCT-----
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCC-----
Confidence 99999999999999873 454 45679999999999999999999999999999999999999988888886654
Q ss_pred ccceEeccCCCCCCCccCC-CCC-CcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCC
Q 002158 354 ARLKIDLRNNSFSNIVGDL-TLP-NNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQA 421 (958)
Q Consensus 354 ~l~~L~Ls~N~l~~l~~~~-~l~-~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~ 421 (958)
.|+.|||++|+|+.++... .++ +|+.|++++|||.|+|...++..+...... .......+.|.-+.
T Consensus 522 ~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l~~~~~--~~~~~~~~~C~~p~ 589 (606)
T 3vq2_A 522 SLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQ--FLVNVEQMTCATPV 589 (606)
T ss_dssp TCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTTTTTSSS--SBSSGGGCCCC---
T ss_pred cCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHHHHcCcc--cccCCccceeCCCh
Confidence 5669999999999999876 676 699999999999999998877666543321 22234456666544
No 271
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.98 E-value=3.4e-32 Score=322.69 Aligned_cols=320 Identities=18% Similarity=0.242 Sum_probs=259.5
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCC-CCChhhcCCCCCCEEe
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSG-SLPDELGYLSNLNRLQ 163 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~-~~p~~l~~l~~L~~L~ 163 (958)
..+++.|+|++|.+++..|..|+++++|++|++++|....+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+
T Consensus 44 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 121 (520)
T 2z7x_B 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG 121 (520)
T ss_dssp CTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE
T ss_pred cccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEE
Confidence 34789999999999998899999999999999998887788877 88999999999999986 4788899999998888
Q ss_pred cccccccc-------------------------cCcccccccc-------------------------------------
Q 002158 164 VDENNITG-------------------------TIPKSFANLS------------------------------------- 181 (958)
Q Consensus 164 L~~N~l~~-------------------------~~p~~~~~l~------------------------------------- 181 (958)
+++|++++ ..|..+..+.
T Consensus 122 L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 201 (520)
T 2z7x_B 122 LSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVL 201 (520)
T ss_dssp EEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECC
T ss_pred ecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccc
Confidence 88887742 2344443322
Q ss_pred ----------------------------------------------ccceEecccccccccCchhh-----cCCccchhh
Q 002158 182 ----------------------------------------------RVRHLHLNNNSIGGQIPSEL-----SKLSTLIHL 210 (958)
Q Consensus 182 ----------------------------------------------~L~~L~Ls~N~l~~~~p~~l-----~~l~~L~~L 210 (958)
+|++|++++|+++|.+|..+ ..+++|+.+
T Consensus 202 ~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l 281 (520)
T 2z7x_B 202 EDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIH 281 (520)
T ss_dssp STTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEE
T ss_pred cccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEec
Confidence 68888888888988889888 778877777
Q ss_pred hccCCccccCCC-cc-------------------------cCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccC
Q 002158 211 LVDNNNLSGNLP-PE-------------------------LSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNC 264 (958)
Q Consensus 211 ~L~~N~l~~~~~-~~-------------------------l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N 264 (958)
++++|.+ .+| .. +..+++|++|++++|+++ ...|..+.++++|+.|+|++|
T Consensus 282 ~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N 358 (520)
T 2z7x_B 282 QVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLT-DTVFENCGHLTELETLILQMN 358 (520)
T ss_dssp EEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCC-TTTTTTCCCCSSCCEEECCSS
T ss_pred cccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccC-hhhhhhhccCCCCCEEEccCC
Confidence 7777776 222 11 268899999999999998 457889999999999999999
Q ss_pred CCCCCC--C-CCCCCCCcCEEeccCCcCCCcCCC--CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCc
Q 002158 265 NLQGAV--P-DLSRIPNLYYLDLSWNHLTGSIPS--KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGS 339 (958)
Q Consensus 265 ~l~~~~--~-~l~~l~~L~~L~Ls~N~l~~~~~~--~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 339 (958)
++++.+ + .+..+++|++|+|++|.+++.+|. ...+++|++|+|++|++++..+..+. ++|+.|+|++|+|+ .
T Consensus 359 ~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ 435 (520)
T 2z7x_B 359 QLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-S 435 (520)
T ss_dssp CCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-C
T ss_pred ccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-c
Confidence 999743 2 388999999999999999975664 35568999999999999988877765 79999999999999 8
Q ss_pred cchhhhcccccCccccceEeccCCCCCCCccC-C-CCCCcceEEeCCCCCCCCCCCCCC-CcccccCCCCCccccccCCC
Q 002158 340 IPATIWQNKSFSTKARLKIDLRNNSFSNIVGD-L-TLPNNVTLRLGGNPICTSANIPNT-GRFCGSDAGGDETLTNSKVN 416 (958)
Q Consensus 340 ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~-~-~l~~L~~L~l~~N~l~~~~~~~~~-~~~~~~~~~~~~~L~~n~~~ 416 (958)
+|..++.+ +.|+.|+|++|+|++++.. . .+++|+.|++++|||.|+|...++ ..+....... ......
T Consensus 436 ip~~~~~l-----~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~~~~~~~~~----~~~~~~ 506 (520)
T 2z7x_B 436 IPKQVVKL-----EALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQK----EQGSAK 506 (520)
T ss_dssp CCGGGGGC-----TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHHHHHTTTT----EESCCB
T ss_pred cchhhhcC-----CCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCchHHHHHHHHhcccc----CCCCCC
Confidence 99988754 4566999999999999986 3 899999999999999999998777 5554333221 234556
Q ss_pred CCCCC
Q 002158 417 CPVQA 421 (958)
Q Consensus 417 C~c~~ 421 (958)
|.-+.
T Consensus 507 C~~p~ 511 (520)
T 2z7x_B 507 CSGSG 511 (520)
T ss_dssp BTTTC
T ss_pred cCCcc
Confidence 66653
No 272
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=8.4e-32 Score=322.25 Aligned_cols=300 Identities=19% Similarity=0.212 Sum_probs=256.2
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCC-CCChhhcCCCCCCEEe
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSG-SLPDELGYLSNLNRLQ 163 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~-~~p~~l~~l~~L~~L~ 163 (958)
..+++.|+|++|.+++..|..|+.+++|++|++++|....+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+
T Consensus 75 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~ 152 (562)
T 3a79_B 75 LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG 152 (562)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEE
T ss_pred CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEe
Confidence 45799999999999999999999999999999998888899987 89999999999999996 4568999999999999
Q ss_pred cccccccccCcccccccccc--ceEecccccc--cccCchhhcCCc----------------------------------
Q 002158 164 VDENNITGTIPKSFANLSRV--RHLHLNNNSI--GGQIPSELSKLS---------------------------------- 205 (958)
Q Consensus 164 L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~l~~l~---------------------------------- 205 (958)
|++|++++. .+..+++| +.|+|++|.+ ++..|..+..+.
T Consensus 153 L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 229 (562)
T 3a79_B 153 LSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIK 229 (562)
T ss_dssp EECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEE
T ss_pred cCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccc
Confidence 999999863 45555555 8899998888 666665555433
Q ss_pred -----------------------------------------------cchhhhccCCccccCCCccc-------------
Q 002158 206 -----------------------------------------------TLIHLLVDNNNLSGNLPPEL------------- 225 (958)
Q Consensus 206 -----------------------------------------------~L~~L~L~~N~l~~~~~~~l------------- 225 (958)
+|++|++++|++++.+|..+
T Consensus 230 ~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~ 309 (562)
T 3a79_B 230 LNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMI 309 (562)
T ss_dssp CCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEE
T ss_pred ccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheeh
Confidence 67777778888877666654
Q ss_pred ----------------------------------------CCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCC
Q 002158 226 ----------------------------------------SELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCN 265 (958)
Q Consensus 226 ----------------------------------------~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~ 265 (958)
..+++|++|++++|+++ ...|..+.++++|+.|+|++|+
T Consensus 310 ~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~ 388 (562)
T 3a79_B 310 EHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFT-DSVFQGCSTLKRLQTLILQRNG 388 (562)
T ss_dssp EEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCC-TTTTTTCCSCSSCCEEECCSSC
T ss_pred hhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccc-cchhhhhcccCCCCEEECCCCC
Confidence 67899999999999998 4678899999999999999999
Q ss_pred CCCCCC---CCCCCCCcCEEeccCCcCCCcCCCC--CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCcc
Q 002158 266 LQGAVP---DLSRIPNLYYLDLSWNHLTGSIPSK--KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSI 340 (958)
Q Consensus 266 l~~~~~---~l~~l~~L~~L~Ls~N~l~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~i 340 (958)
+++.+. .+..+++|++|+|++|++++.+|.. ..+++|++|+|++|+|++..+..+. ++|+.|+|++|+|+ .+
T Consensus 389 l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~i 465 (562)
T 3a79_B 389 LKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SI 465 (562)
T ss_dssp CCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CC
T ss_pred cCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-cc
Confidence 998653 4899999999999999999756653 4569999999999999987776654 79999999999999 89
Q ss_pred chhhhcccccCccccceEeccCCCCCCCccC-C-CCCCcceEEeCCCCCCCCCCCCCCCc
Q 002158 341 PATIWQNKSFSTKARLKIDLRNNSFSNIVGD-L-TLPNNVTLRLGGNPICTSANIPNTGR 398 (958)
Q Consensus 341 p~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~-~-~l~~L~~L~l~~N~l~~~~~~~~~~~ 398 (958)
|..++.+ +.|+.|+|++|+|++++.. . .+++|+.|++++|||.|+|...++..
T Consensus 466 p~~~~~l-----~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~ 520 (562)
T 3a79_B 466 PKDVTHL-----QALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLS 520 (562)
T ss_dssp CTTTTSS-----CCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHHHH
T ss_pred ChhhcCC-----CCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHHHH
Confidence 9888644 4567999999999999986 3 89999999999999999998777643
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.6e-32 Score=303.05 Aligned_cols=288 Identities=21% Similarity=0.238 Sum_probs=183.2
Q ss_pred CCCHhHHHHHHHHHHHcc-cCccccCCCC---CCCCCCCCCCceeeCccccCCCceeeEEEEccCCcCCCCccccccCCC
Q 002158 35 TTDPQEASALRAIKNSLV-DSMNHLRNWN---KGDPCMSNWTGVLCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQLS 110 (958)
Q Consensus 35 ~~~~~~~~al~~~k~~~~-~~~~~l~~W~---~~~~c~~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~ 110 (958)
....+|+.||++||.++. |+.+++.+|. .....+|.|.|+.|...... + .-...+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~-------------------l--~~~~~~ 81 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADL-------------------L--EDATQP 81 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHH-------------------H--HHHTST
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHH-------------------H--hccccc
Confidence 345789999999999994 7778888994 33444458999999431100 0 001234
Q ss_pred CcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEeccc
Q 002158 111 RLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNN 190 (958)
Q Consensus 111 ~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 190 (958)
+++.|+++++....+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+.++++|++|+|++
T Consensus 82 ~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~ 159 (328)
T 4fcg_A 82 GRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRA 159 (328)
T ss_dssp TCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEE
T ss_pred ceeEEEccCCCchhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCC
Confidence 455555555555567777778888888888888888 78888888888888888888888 6777888888888888888
Q ss_pred ccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCC
Q 002158 191 NSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAV 270 (958)
Q Consensus 191 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 270 (958)
|++.+.+|..+... ..+..|.++++|++|+|++|+++ .+|..+.++++|++|+|++|++++.+
T Consensus 160 n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~--~lp~~l~~l~~L~~L~L~~N~l~~l~ 222 (328)
T 4fcg_A 160 CPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR--SLPASIANLQNLKSLKIRNSPLSALG 222 (328)
T ss_dssp ETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC--CCCGGGGGCTTCCEEEEESSCCCCCC
T ss_pred CCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC--cchHhhcCCCCCCEEEccCCCCCcCc
Confidence 87777777665430 01122344555555555555554 44555555556666666666665555
Q ss_pred CCCCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccc
Q 002158 271 PDLSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKS 349 (958)
Q Consensus 271 ~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~ 349 (958)
+.+..+++|++|+|++|.+.+.+|.. ..+++|++|+|++|.+.+.+|..+..+++|++|+|++|++.+.+|..+..+..
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCT
T ss_pred hhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccC
Confidence 45555566666666665555555443 33456666666666666666666666666666666666666666666655433
Q ss_pred cCccccceEeccCCCCCC
Q 002158 350 FSTKARLKIDLRNNSFSN 367 (958)
Q Consensus 350 ~~~~~l~~L~Ls~N~l~~ 367 (958)
+..+++..|.+..
T Consensus 303 -----L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 303 -----NCIILVPPHLQAQ 315 (328)
T ss_dssp -----TCEEECCGGGSCC
T ss_pred -----ceEEeCCHHHHHH
Confidence 2245555444433
No 274
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.6e-31 Score=329.32 Aligned_cols=253 Identities=19% Similarity=0.286 Sum_probs=179.3
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCc--ccC-CCCccccCCC-------CCcEEEeeCCCCCCCCCh--h
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWND--LTG-TIPKEIGNIS-------SLIFLLLNGNKLSGSLPD--E 152 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~--~~~-~ip~~i~~l~-------~L~~L~Ls~n~l~~~~p~--~ 152 (958)
..+++.|+|++|++.+.+|..|++|++|+.|++++| +.+ .+|..+++++ +|++|+|++|.++ .+|. .
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 568 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASAS 568 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHH
T ss_pred CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhh
Confidence 357999999999999999999999999999999866 566 7888777666 9999999999999 8888 8
Q ss_pred hcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCcc-chhhhccCCccccCCCcccCCCCC-
Q 002158 153 LGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLST-LIHLLVDNNNLSGNLPPELSELPQ- 230 (958)
Q Consensus 153 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~~~~l~~l~~- 230 (958)
|+++++|++|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+++ .+|..+..++.
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~ 644 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVY 644 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSS
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccC
Confidence 999999999999999999 778 8999999999999999999 88888888888 999999999988 67777766544
Q ss_pred -ccEEEccCCCCCCCCccc---ccc--CCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCC-C---
Q 002158 231 -LCILQLDNNNFSASEIPA---TYG--NFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKL-S--- 299 (958)
Q Consensus 231 -L~~L~L~~N~l~~~~~p~---~~~--~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~-~--- 299 (958)
|+.|+|++|++++ .+|. .+. .+++|+.|+|++|+++.++.. +..+++|+.|+|++|+|+ .+|...+ .
T Consensus 645 ~L~~L~Ls~N~l~g-~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~ 722 (876)
T 4ecn_A 645 VMGSVDFSYNKIGS-EGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDG 722 (876)
T ss_dssp CEEEEECCSSCTTT-TSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTS
T ss_pred CCCEEECcCCcCCC-ccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccc
Confidence 7777777777753 2221 112 223555555555555543333 234555555555555555 3332211 1
Q ss_pred -----CCcCEEEccCCcCCCccchhcc--CCCCCCeEeeecccCCCccchhhhc
Q 002158 300 -----ENVTTIDLSDNYLNGSILESIS--NLPFLQTLSLENNFLTGSIPATIWQ 346 (958)
Q Consensus 300 -----~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~ip~~l~~ 346 (958)
++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..++.
T Consensus 723 ~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~ 774 (876)
T 4ecn_A 723 NYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLN 774 (876)
T ss_dssp CCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGG
T ss_pred cccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhc
Confidence 15555555555555 3444443 55555555555555554 4544443
No 275
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=308.23 Aligned_cols=264 Identities=23% Similarity=0.284 Sum_probs=172.1
Q ss_pred CCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcC
Q 002158 124 TIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSK 203 (958)
Q Consensus 124 ~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 203 (958)
.+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..
T Consensus 57 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 134 (440)
T 3zyj_A 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVY 134 (440)
T ss_dssp SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCS
T ss_pred cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhc
Confidence 4454443 57788888888888777777888888888888888888777777888888888888888888665666777
Q ss_pred CccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEe
Q 002158 204 LSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLD 283 (958)
Q Consensus 204 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~ 283 (958)
+++|++|+|++|+|+...+..|..+++|++|+|++|+......+..|.++++|+.|+|++|+++.. +.+..+++|+.|+
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~ 213 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELD 213 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEE
T ss_pred cccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-cccCCCcccCEEE
Confidence 778888888888777666667777777777777774433222233566666666666666666533 2455555555555
Q ss_pred ccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccC
Q 002158 284 LSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRN 362 (958)
Q Consensus 284 Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~ 362 (958)
|++|++++..+.. ..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l-------------------------- 267 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL-------------------------- 267 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCC--------------------------
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCC--------------------------
Confidence 5555555433322 2334555555555555555455555555555555555444
Q ss_pred CCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCC--Cc
Q 002158 363 NSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPE--PC 438 (958)
Q Consensus 363 N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~--~~ 438 (958)
+.++... .+++|+.|+|++||| .|||...++..|++....... ..
T Consensus 268 ---~~~~~~~~~~l~~L~~L~L~~Np~----------------------------~CdC~l~~l~~~~~~~~~~~~~~~~ 316 (440)
T 3zyj_A 268 ---TLLPHDLFTPLHHLERIHLHHNPW----------------------------NCNCDILWLSWWIKDMAPSNTACCA 316 (440)
T ss_dssp ---CCCCTTTTSSCTTCCEEECCSSCE----------------------------ECSSTTHHHHHHHHTTSCSSCSCCC
T ss_pred ---CccChhHhccccCCCEEEcCCCCc----------------------------cCCCCchHHHHHHHhccccCCcccc
Confidence 4444432 577888888888877 677777777788766543322 36
Q ss_pred eeeeeceee
Q 002158 439 FCAAPLRIG 447 (958)
Q Consensus 439 ~c~sp~~~~ 447 (958)
.|++|+..+
T Consensus 317 ~C~~P~~l~ 325 (440)
T 3zyj_A 317 RCNTPPNLK 325 (440)
T ss_dssp BEEESTTTT
T ss_pred CCCChhHhc
Confidence 799998765
No 276
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=2.8e-32 Score=300.85 Aligned_cols=251 Identities=29% Similarity=0.441 Sum_probs=188.3
Q ss_pred CCCcEEEeeCCCCCC--CCChhhcCCCCCCEEeccc-ccccccCccccccccccceEecccccccccCchhhcCCccchh
Q 002158 133 SSLIFLLLNGNKLSG--SLPDELGYLSNLNRLQVDE-NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIH 209 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 209 (958)
.+++.|+|++|.+++ .+|..|.++++|++|+|++ |++++.+|..|.++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356677777777776 6677777777777777773 7777677777777777777777777777677777777777777
Q ss_pred hhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCC-CCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCC
Q 002158 210 LLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFS-KLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWN 287 (958)
Q Consensus 210 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N 287 (958)
|+|++|++++.+|..+..+++|++|+|++|+++ ..+|..+..++ +|+.|+|++|++++..+. +..++ |++|+|++|
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRIS-GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCE-EECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCccc-CcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 777777777677777777777777777777775 35566777776 777777777777765553 55555 778888888
Q ss_pred cCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCC
Q 002158 288 HLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFS 366 (958)
Q Consensus 288 ~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~ 366 (958)
.+++.++.. ..+++|+.|+|++|.+++..+. +..+++|++|+|++|+|++.+|..+..+. .|+.|+|++|+++
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-----~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLK-----FLHSLNVSFNNLC 281 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCT-----TCCEEECCSSEEE
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCc-----CCCEEECcCCccc
Confidence 777655543 4457888888888888776666 88899999999999999999999887654 5669999999999
Q ss_pred -CCccCCCCCCcceEEeCCCCCCCCC
Q 002158 367 -NIVGDLTLPNNVTLRLGGNPICTSA 391 (958)
Q Consensus 367 -~l~~~~~l~~L~~L~l~~N~l~~~~ 391 (958)
.++....+++|+.+++.+||+.|..
T Consensus 282 ~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 282 GEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred ccCCCCccccccChHHhcCCCCccCC
Confidence 4666668999999999999986643
No 277
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=9.6e-31 Score=316.28 Aligned_cols=313 Identities=18% Similarity=0.105 Sum_probs=248.9
Q ss_pred CCceeeCcc----ccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcc-cCCCCccccCCCCCcEEEeeCCCC
Q 002158 71 WTGVLCFDT----VETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDL-TGTIPKEIGNISSLIFLLLNGNKL 145 (958)
Q Consensus 71 w~gV~C~~~----~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~-~~~ip~~i~~l~~L~~L~Ls~n~l 145 (958)
+..|.|.+. ++.....+++.|+|++|.+++..+..|+++++|++|++++|. .+..|..|.++++|++|+|++|.+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 567888652 233344579999999999999999999999999999998664 555688899999999999999999
Q ss_pred CCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCccc
Q 002158 146 SGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPEL 225 (958)
Q Consensus 146 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l 225 (958)
++..|..|+++++|++|+|++|++++..+..+.++++|++|+|++|.+++.....+..+++|++|++++|++++..+..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 98889999999999999999999998778889999999999999999997544455569999999999999998888889
Q ss_pred CCCCCcc--EEEccCCCCCCCCccccccCC--------------------------------------------------
Q 002158 226 SELPQLC--ILQLDNNNFSASEIPATYGNF-------------------------------------------------- 253 (958)
Q Consensus 226 ~~l~~L~--~L~L~~N~l~~~~~p~~~~~l-------------------------------------------------- 253 (958)
..+++|+ .|++++|.++. ..|..+...
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~ 252 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCE-ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGG
T ss_pred hhhcccceeEEecCCCccCc-cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhh
Confidence 9999999 89999998863 223332210
Q ss_pred -CCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEee
Q 002158 254 -SKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSL 331 (958)
Q Consensus 254 -~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 331 (958)
.+|+.|++++|.+++.++. |..+++|++|+|++|.++...+....+++|++|+|++|.+++..+..+..+++|++|++
T Consensus 253 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 332 (606)
T 3t6q_A 253 EMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSI 332 (606)
T ss_dssp GSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEEC
T ss_pred cCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEEC
Confidence 1577788888888877775 78888888888888888843334455688888888888888887888888888888888
Q ss_pred ecccCCCccchhhhcccccCccccceEeccCCCCCCCc---cCC-CCCCcceEEeCCCCCC
Q 002158 332 ENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIV---GDL-TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 332 ~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~---~~~-~l~~L~~L~l~~N~l~ 388 (958)
++|.+.+.+|...+. ..+.|+.|++++|+++.+. ... .+++|+.|++++|.+.
T Consensus 333 ~~n~~~~~~~~~~~~----~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 389 (606)
T 3t6q_A 333 KGNTKRLELGTGCLE----NLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL 389 (606)
T ss_dssp CSCSSCCBCCSSTTT----TCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCE
T ss_pred CCCCcccccchhhhh----ccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCC
Confidence 888888777765322 1345667777777777764 222 6777777777777764
No 278
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=326.25 Aligned_cols=94 Identities=20% Similarity=0.195 Sum_probs=64.9
Q ss_pred CCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcce
Q 002158 300 ENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVT 379 (958)
Q Consensus 300 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~ 379 (958)
++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..+ . +.|+.|||++|+|+.++... +.+|+.
T Consensus 480 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~-~------~~L~~L~Ls~N~l~~~~~~~-~~~L~~ 551 (844)
T 3j0a_A 480 SHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL-P------ANLEILDISRNQLLAPNPDV-FVSLSV 551 (844)
T ss_dssp CCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCC-C------SCCCEEEEEEECCCCCCSCC-CSSCCE
T ss_pred ccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhh-h------ccccEEECCCCcCCCCChhH-hCCcCE
Confidence 455555555555555566666667777777777777764333322 1 45677888888887766543 668999
Q ss_pred EEeCCCCCCCCCCCCCCCcccc
Q 002158 380 LRLGGNPICTSANIPNTGRFCG 401 (958)
Q Consensus 380 L~l~~N~l~~~~~~~~~~~~~~ 401 (958)
|++++|||.|+|+..++..+..
T Consensus 552 l~l~~Np~~C~c~~~~f~~~~~ 573 (844)
T 3j0a_A 552 LDITHNKFICECELSTFINWLN 573 (844)
T ss_dssp EEEEEECCCCSSSCCSHHHHHH
T ss_pred EEecCCCcccccccHHHHHHHH
Confidence 9999999999999888776543
No 279
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=299.53 Aligned_cols=277 Identities=20% Similarity=0.264 Sum_probs=181.0
Q ss_pred CCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhcc
Q 002158 134 SLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVD 213 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 213 (958)
+|++|+|++|.+++..+..+.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.++++|++|+++
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 66677777777765444466677777777777777776666667777777777777777775444446677777777777
Q ss_pred CCccccCCC-cccCCCCCccEEEccCCC-CCCCCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCC
Q 002158 214 NNNLSGNLP-PELSELPQLCILQLDNNN-FSASEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLT 290 (958)
Q Consensus 214 ~N~l~~~~~-~~l~~l~~L~~L~L~~N~-l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~ 290 (958)
+|++++... ..+..+++|++|++++|+ ++ ...+..+.++++|++|++++|++++..+ .+..+++|++|++++|.++
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCcccc-ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 777764433 466677777777777764 43 2334566777777777777777776654 3677777777777777765
Q ss_pred CcCCCC--CCCCCcCEEEccCCcCCCccchhcc---CCCCCCeEeeecccCCC----ccchhhhcccccCccccceEecc
Q 002158 291 GSIPSK--KLSENVTTIDLSDNYLNGSILESIS---NLPFLQTLSLENNFLTG----SIPATIWQNKSFSTKARLKIDLR 361 (958)
Q Consensus 291 ~~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~----~ip~~l~~~~~~~~~~l~~L~Ls 361 (958)
. ++.. ..+++|+.|+|++|.+++..+..+. ....++.++|++|.+++ .+|..+..+ +.|+.|||+
T Consensus 212 ~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l-----~~L~~L~Ls 285 (353)
T 2z80_A 212 L-LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQI-----SGLLELEFS 285 (353)
T ss_dssp T-HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTC-----TTCCEEECC
T ss_pred c-chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcc-----cCCCEEECC
Confidence 3 3322 1246777777777777765544433 35667778888887775 355555443 345578888
Q ss_pred CCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCC-CCCCCCcccccCCCC-CC
Q 002158 362 NNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQ-ACPVDNFFEYVPASP-EP 437 (958)
Q Consensus 362 ~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~-~~~~~~~~~~~~~~~-~~ 437 (958)
+|+|+.++... .+++|++|+|++||| .|+|+ +.++..|++...... ..
T Consensus 286 ~N~l~~i~~~~~~~l~~L~~L~L~~N~~----------------------------~~~~~~l~~l~~~~~~~~~~~~~~ 337 (353)
T 2z80_A 286 RNQLKSVPDGIFDRLTSLQKIWLHTNPW----------------------------DCSCPRIDYLSRWLNKNSQKEQGS 337 (353)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCB----------------------------CCCHHHHHHHHHHHHHTTTTEESC
T ss_pred CCCCCccCHHHHhcCCCCCEEEeeCCCc----------------------------cCcCCCcHHHHHHHHhccccCCCC
Confidence 88888877764 788999999999988 45664 555666775544333 24
Q ss_pred ceeeeece
Q 002158 438 CFCAAPLR 445 (958)
Q Consensus 438 ~~c~sp~~ 445 (958)
..|++|.+
T Consensus 338 ~~C~~p~~ 345 (353)
T 2z80_A 338 AKCSGSGK 345 (353)
T ss_dssp CBBTTTCC
T ss_pred cccCCCCC
Confidence 67777643
No 280
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3e-30 Score=300.11 Aligned_cols=275 Identities=22% Similarity=0.246 Sum_probs=176.5
Q ss_pred CcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccC
Q 002158 135 LIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDN 214 (958)
Q Consensus 135 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 214 (958)
...++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 344555555555 4444333 4555666666666555555555666666666666666555555566666666666666
Q ss_pred CccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEccc-CCCCCCCCC-CCCCCCcCEEeccCCcCCCc
Q 002158 215 NNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRN-CNLQGAVPD-LSRIPNLYYLDLSWNHLTGS 292 (958)
Q Consensus 215 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ 292 (958)
|+|++..+..|..+++|++|+|++|+++. ..+..|.++++|+.|+|++ |.+...++. |..+++|++|+|++|+++ .
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 210 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-D 210 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCE-ECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-S
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcce-eCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-c
Confidence 66665555556666666666666666642 2233566666666666666 344434432 666777777777777776 4
Q ss_pred CCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC
Q 002158 293 IPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL 372 (958)
Q Consensus 293 ~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~ 372 (958)
+|....+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..+..+ +.|+.|+|++|+|+.++...
T Consensus 211 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~ 285 (452)
T 3zyi_A 211 MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGL-----ASLVELNLAHNNLSSLPHDL 285 (452)
T ss_dssp CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTC-----TTCCEEECCSSCCSCCCTTS
T ss_pred cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCC-----CCCCEEECCCCcCCccChHH
Confidence 4556666777777777777777777788888888888888888876656555433 34557888888888777654
Q ss_pred --CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCC--Cceeeeeceee
Q 002158 373 --TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPE--PCFCAAPLRIG 447 (958)
Q Consensus 373 --~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~--~~~c~sp~~~~ 447 (958)
.+++|+.|+|++||| .|||...++..|++....... ...|++|...+
T Consensus 286 ~~~l~~L~~L~L~~Np~----------------------------~CdC~~~~l~~~l~~~~~~~~~~~~~C~~P~~l~ 336 (452)
T 3zyi_A 286 FTPLRYLVELHLHHNPW----------------------------NCDCDILWLAWWLREYIPTNSTCCGRCHAPMHMR 336 (452)
T ss_dssp STTCTTCCEEECCSSCE----------------------------ECSTTTHHHHHHHHHHC---CCSSCBEEESTTTT
T ss_pred hccccCCCEEEccCCCc----------------------------CCCCCchHHHHHHHHhCccCCccCcEeCCchHhc
Confidence 688899999888887 677788788888876543322 35899998755
No 281
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=1.3e-29 Score=310.75 Aligned_cols=321 Identities=21% Similarity=0.214 Sum_probs=254.3
Q ss_pred CCCCCCCceeeCcc----ccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCc-ccCCCCccccCCCCCcEEEe
Q 002158 66 PCMSNWTGVLCFDT----VETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWND-LTGTIPKEIGNISSLIFLLL 140 (958)
Q Consensus 66 ~c~~~w~gV~C~~~----~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~-~~~~ip~~i~~l~~L~~L~L 140 (958)
+|.|.+..|.|... ++.+...+++.|+|++|++++..+..|+++++|++|++++| +.+..|..|+++++|++|+|
T Consensus 1 ~C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 80 (680)
T 1ziw_A 1 KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNL 80 (680)
T ss_dssp ---CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEEC
T ss_pred CceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEEC
Confidence 36667778888642 23334568999999999999988889999999999999855 55556788999999999999
Q ss_pred eCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccC
Q 002158 141 NGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGN 220 (958)
Q Consensus 141 s~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 220 (958)
++|.+++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..+.++++|++|++++|++++.
T Consensus 81 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 81 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 99999965555799999999999999999988888999999999999999999998899999999999999999999987
Q ss_pred CCcccC--CCCCccEEEccCCCCCCCCccccccCC---------------------------CCCCEEEcccCCCCCCCC
Q 002158 221 LPPELS--ELPQLCILQLDNNNFSASEIPATYGNF---------------------------SKLVKLSLRNCNLQGAVP 271 (958)
Q Consensus 221 ~~~~l~--~l~~L~~L~L~~N~l~~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~~~~~ 271 (958)
.+..+. .+++|++|++++|+++. ..|..+..+ ++|+.|++++|.+++..+
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~ 239 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKE-FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN 239 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCC-BCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT
T ss_pred CHHHhhccccccccEEECCCCcccc-cChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh
Confidence 777654 56899999999999974 445555443 567778888888887766
Q ss_pred C-CCCCCC--cCEEeccCCcCCCcCCC-CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchh----
Q 002158 272 D-LSRIPN--LYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPAT---- 343 (958)
Q Consensus 272 ~-l~~l~~--L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~---- 343 (958)
. +..++. |+.|+|++|.+++..+. ...+++|++|+|++|++++..+..|.++++|+.|+|++|...+.++..
T Consensus 240 ~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~ 319 (680)
T 1ziw_A 240 TTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 319 (680)
T ss_dssp TTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCE
T ss_pred hHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccc
Confidence 4 666644 88888888888866554 355688888899888888888888888888888888887766533210
Q ss_pred hhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCC
Q 002158 344 IWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPI 387 (958)
Q Consensus 344 l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l 387 (958)
+....--..+.++.|++++|+++.++... .+++|++|++++|.+
T Consensus 320 i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~ 365 (680)
T 1ziw_A 320 IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFT 365 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBS
T ss_pred cChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCch
Confidence 00001112456778999999999887654 788999999998875
No 282
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=8.2e-30 Score=290.56 Aligned_cols=310 Identities=20% Similarity=0.199 Sum_probs=259.2
Q ss_pred eeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEec
Q 002158 86 LHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQV 164 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 164 (958)
.+++.|+|++|.+.+..+..++.+++|++|++++|....+ |..|+++++|++|+|++|.++...+..|.++++|++|++
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 4799999999999988888999999999999987666555 566899999999999999999444444689999999999
Q ss_pred ccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCC
Q 002158 165 DENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSAS 244 (958)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 244 (958)
++|++++..+..|..+++|++|+|++|.+++. + +..+++|+.|++++|.+++ +...++|++|++++|.++.
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~--~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~- 219 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINV- 219 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-C--GGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCE-
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCcc-c--cccccccceeecccccccc-----cCCCCcceEEECCCCeeee-
Confidence 99999988888999999999999999999954 2 6678899999999999874 3445789999999999963
Q ss_pred CccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCC
Q 002158 245 EIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNL 323 (958)
Q Consensus 245 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l 323 (958)
+|.. .+++|+.|+|++|++++. +.+..+++|++|+|++|.+++..+.. ..+++|++|+|++|++++ ++..+..+
T Consensus 220 -~~~~--~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l 294 (390)
T 3o6n_A 220 -VRGP--VNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPI 294 (390)
T ss_dssp -EECC--CCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCC
T ss_pred -cccc--ccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCC
Confidence 3443 357999999999999975 56889999999999999999765543 567999999999999986 46667889
Q ss_pred CCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCCCCCCCCCcccccC
Q 002158 324 PFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTSANIPNTGRFCGSD 403 (958)
Q Consensus 324 ~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 403 (958)
++|++|+|++|+++ .+|..+..+ +.|+.|+|++|+|+.++ ...+++|+.|++++|||.|+|...+...+
T Consensus 295 ~~L~~L~L~~n~l~-~~~~~~~~l-----~~L~~L~L~~N~i~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~~~~---- 363 (390)
T 3o6n_A 295 PTLKVLDLSHNHLL-HVERNQPQF-----DRLENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALFRNV---- 363 (390)
T ss_dssp TTCCEEECCSSCCC-CCGGGHHHH-----TTCSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHTTTC----
T ss_pred CCCCEEECCCCcce-ecCcccccc-----CcCCEEECCCCccceeC-chhhccCCEEEcCCCCccchhHHHHHHHH----
Confidence 99999999999999 678777654 45679999999999986 44889999999999999998754443322
Q ss_pred CCCCccccccCCCCCCCCC
Q 002158 404 AGGDETLTNSKVNCPVQAC 422 (958)
Q Consensus 404 ~~~~~~L~~n~~~C~c~~~ 422 (958)
....+.+++..|.+..+
T Consensus 364 --~~~~~~~~~~~c~~~~~ 380 (390)
T 3o6n_A 364 --ARPAVDDADQHCKIDYQ 380 (390)
T ss_dssp --CTTTBCCCCSCCCTTCE
T ss_pred --HhhcccccCceeccccc
Confidence 23345677778886543
No 283
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.2e-30 Score=284.93 Aligned_cols=257 Identities=20% Similarity=0.211 Sum_probs=144.1
Q ss_pred CCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccc--cCccccccccccceEecccccccccCchhhcCCccchhhh
Q 002158 134 SLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITG--TIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLL 211 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 211 (958)
+|++|+|++|.++...+..|.++++|++|+|++|+++. ..+..+..+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 45555555555552222234555555555555555542 12344444555555555555555 3344455555555555
Q ss_pred ccCCccccCCC-cccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCC--CCCCCCCCCCcCEEeccCCc
Q 002158 212 VDNNNLSGNLP-PELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQG--AVPDLSRIPNLYYLDLSWNH 288 (958)
Q Consensus 212 L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~l~~l~~L~~L~Ls~N~ 288 (958)
+++|++++..+ ..+..+++|++|++++|.++ ...+..+.++++|++|+|++|.+++ .+..+..+++|++|+|++|.
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCE-ECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCC-ccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 55555554333 34555555555555555554 2334445555555555555555554 22235555666666666666
Q ss_pred CCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCC
Q 002158 289 LTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSN 367 (958)
Q Consensus 289 l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~ 367 (958)
+++..+.. ..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..|..+.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------- 244 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ---------------------- 244 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC----------------------
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH----------------------
Confidence 65443322 3345666666666666666666677778888888888887765555432
Q ss_pred CccCCCC-CCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCC---CCCCceeeee
Q 002158 368 IVGDLTL-PNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPA---SPEPCFCAAP 443 (958)
Q Consensus 368 l~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~---~~~~~~c~sp 443 (958)
.+ ++|+.|+|++|+| .|+|...++..|++..+. ......|++|
T Consensus 245 -----~~~~~L~~L~L~~N~~----------------------------~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 245 -----HFPSSLAFLNLTQNDF----------------------------ACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp -----CCCTTCCEEECTTCCE----------------------------ECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred -----hhhccCCEEEccCCCe----------------------------ecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 23 3677888888877 567777777777754332 2335789988
Q ss_pred ceee
Q 002158 444 LRIG 447 (958)
Q Consensus 444 ~~~~ 447 (958)
...+
T Consensus 292 ~~~~ 295 (306)
T 2z66_A 292 SDKQ 295 (306)
T ss_dssp GGGT
T ss_pred hhhC
Confidence 7643
No 284
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.2e-30 Score=309.28 Aligned_cols=206 Identities=17% Similarity=0.200 Sum_probs=164.3
Q ss_pred ccchhhhccCCccccCC--CcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC--CCCCCCCcC
Q 002158 205 STLIHLLVDNNNLSGNL--PPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP--DLSRIPNLY 280 (958)
Q Consensus 205 ~~L~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--~l~~l~~L~ 280 (958)
++|+.|++++|++++.. +..+..+++|++|++++|.++ .++..+..+++|+.|++++|.+++.++ .+..+++|+
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI--TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEE--EEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccc--cccccccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 44555555555555332 456778899999999999996 356669999999999999999998876 489999999
Q ss_pred EEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCC-CccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceE
Q 002158 281 YLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLN-GSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKI 358 (958)
Q Consensus 281 ~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L 358 (958)
+|+|++|.+.+..+.. ..+++|++|+|++|.++ +.+|..|..+++|++|+|++|++++..|..+..+ +.|+.|
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L 499 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL-----SSLQVL 499 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC-----TTCCEE
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcc-----cCCCEE
Confidence 9999999998766654 55799999999999998 5789999999999999999999998778877654 456799
Q ss_pred eccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCC-cccccCCCCCccccccCCCCCCCC
Q 002158 359 DLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTG-RFCGSDAGGDETLTNSKVNCPVQA 421 (958)
Q Consensus 359 ~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~-~~~~~~~~~~~~L~~n~~~C~c~~ 421 (958)
+|++|++++++... .+++|+.|++++|||.|+|...++. .+..... ..+.+.+ .|..+.
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~---~~~~~~~-~C~~~~ 561 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNS---QKEQGSA-KCSGSG 561 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTG---GGEESCC-BBTTTC
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhcc---ccCCCch-hhCCCC
Confidence 99999999988654 8999999999999999999876654 4433221 2334444 565543
No 285
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=6.1e-30 Score=299.83 Aligned_cols=299 Identities=20% Similarity=0.199 Sum_probs=256.0
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCcc-ccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEe
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKE-IGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQ 163 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~-i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 163 (958)
..+++.|+|++|.+++..|..|+++++|++|++++|....+|.. |.++++|++|+|++|.+++..|..|..+++|++|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 45799999999999999999999999999999998877778764 79999999999999999988899999999999999
Q ss_pred cccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC
Q 002158 164 VDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA 243 (958)
Q Consensus 164 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 243 (958)
|++|.+++..+..|.++++|+.|+|++|++++..+..+.++++|+.|+|++|++.+..+..|..+++|+.|++++|.+.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~- 213 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL- 213 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTC-
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccc-
Confidence 9999999888999999999999999999999877788999999999999999999988889999999999999999886
Q ss_pred CCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEccCCcCCCccchhcc
Q 002158 244 SEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDNYLNGSILESIS 321 (958)
Q Consensus 244 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~ 321 (958)
..++.......+|+.|+|++|++++.+. .+..+++|+.|+|++|.+++..+. ...+++|+.|+|++|++++..+..|.
T Consensus 214 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 293 (477)
T 2id5_A 214 DTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFR 293 (477)
T ss_dssp CEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBT
T ss_pred cccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhc
Confidence 4566666666799999999999998775 489999999999999999965554 35568999999999999999999999
Q ss_pred CCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC-CCCCcceEEeCCCCCCC
Q 002158 322 NLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL-TLPNNVTLRLGGNPICT 389 (958)
Q Consensus 322 ~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~-~l~~L~~L~l~~N~l~~ 389 (958)
++++|+.|+|++|+|++..+..+.. .+.|+.|+|++|.+..-.... .+..+..+.+.+|.+.|
T Consensus 294 ~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C 357 (477)
T 2id5_A 294 GLNYLRVLNVSGNQLTTLEESVFHS-----VGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 357 (477)
T ss_dssp TCTTCCEEECCSSCCSCCCGGGBSC-----GGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBE
T ss_pred CcccCCEEECCCCcCceeCHhHcCC-----CcccCEEEccCCCccCccchHhHHhhhhccccCccCcee
Confidence 9999999999999999544443333 356779999999997532221 22223334445555544
No 286
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=1.5e-29 Score=301.93 Aligned_cols=130 Identities=18% Similarity=0.246 Sum_probs=92.0
Q ss_pred ccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeE
Q 002158 250 YGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTL 329 (958)
Q Consensus 250 ~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 329 (958)
+..+++|+.|+|++|++++.+..+..+++|++|+|++|.+++ ++.. ..++|++|+|++|+|++.. ..+++|++|
T Consensus 383 ~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~-~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L 456 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRV-VKTC-IPQTLEVLDVSNNNLDSFS----LFLPRLQEL 456 (549)
T ss_dssp GGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSC-CCTT-SCTTCSEEECCSSCCSCCC----CCCTTCCEE
T ss_pred hhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCccc-ccch-hcCCceEEECCCCChhhhc----ccCChhcEE
Confidence 455555555555555555444445555566666666666552 2221 1246666777777666542 578999999
Q ss_pred eeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCC
Q 002158 330 SLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSAN 392 (958)
Q Consensus 330 ~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~ 392 (958)
+|++|+|+ .+|.. .. .+.|+.|||++|+++.++... .+++|+.|++++|||.|+|.
T Consensus 457 ~Ls~N~l~-~ip~~-~~-----l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 457 YISRNKLK-TLPDA-SL-----FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp ECCSSCCS-SCCCG-GG-----CTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred ECCCCccC-cCCCc-cc-----CccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99999998 78863 22 357889999999999988763 89999999999999999996
No 287
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=6.2e-30 Score=297.83 Aligned_cols=314 Identities=20% Similarity=0.231 Sum_probs=259.3
Q ss_pred EEEEccCCcCCCCccccccCCCCcceeeccCcccCC-CCccccCCCCCcEEEeeCCCCCCCC-ChhhcCCCCCCEEeccc
Q 002158 89 RELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGT-IPKEIGNISSLIFLLLNGNKLSGSL-PDELGYLSNLNRLQVDE 166 (958)
Q Consensus 89 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~-ip~~i~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~L~~ 166 (958)
..++..+++++.. |. + .++|++|++++|.... .|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~~l-p~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLHQV-PE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCSSC-CC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcccC-CC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 4577777777654 33 2 3789999998665555 4788999999999999999998665 56799999999999999
Q ss_pred ccccccCccccccccccceEecccccccccCchh--hcCCccchhhhccCCccccCCCcc-cCCCCCccEEEccCCCCCC
Q 002158 167 NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSE--LSKLSTLIHLLVDNNNLSGNLPPE-LSELPQLCILQLDNNNFSA 243 (958)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~ 243 (958)
|++++..|..|.++++|++|+|++|++++.++.. +..+++|++|+|++|++++..|.. +.++++|++|+|++|+++.
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 9999888999999999999999999999766655 999999999999999999887876 8999999999999999973
Q ss_pred CCccccccCC--CCCCEEEcccCCCCCCCCC---------CCCCCCcCEEeccCCcCCCcCCCC----------------
Q 002158 244 SEIPATYGNF--SKLVKLSLRNCNLQGAVPD---------LSRIPNLYYLDLSWNHLTGSIPSK---------------- 296 (958)
Q Consensus 244 ~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~---------l~~l~~L~~L~Ls~N~l~~~~~~~---------------- 296 (958)
..+..+..+ .+|+.|++++|.+.+..+. +..+++|+.|+|++|.+++..+..
T Consensus 169 -~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 169 -ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp -CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred -cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 556677666 6899999999999987653 346789999999999886532210
Q ss_pred ------------------------CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCc
Q 002158 297 ------------------------KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFST 352 (958)
Q Consensus 297 ------------------------~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~ 352 (958)
...++|+.|+|++|.+++..+..|..+++|++|+|++|++++..|..+..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l----- 322 (455)
T 3v47_A 248 NSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGL----- 322 (455)
T ss_dssp TCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC-----
T ss_pred cccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCc-----
Confidence 012589999999999999999999999999999999999997777777554
Q ss_pred cccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCC
Q 002158 353 KARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVN 416 (958)
Q Consensus 353 ~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~ 416 (958)
+.|+.|+|++|++++++... .+++|+.|+|++|.+..... ..+......+.+.|.+|.+.
T Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 323 THLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGD----QSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp TTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECT----TTTTTCTTCCEEECCSSCCS
T ss_pred ccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccCh----hhccccccccEEECCCCccc
Confidence 45679999999999986543 89999999999999854321 22334456677888888775
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=7.7e-29 Score=277.78 Aligned_cols=279 Identities=20% Similarity=0.302 Sum_probs=141.7
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccc
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDE 166 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 166 (958)
+++.|++++|.+++..+ +..+++|++|++++|....+| .+.++++|++|+|++|.+++ ++. +..+++|++|++++
T Consensus 67 ~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~ 141 (347)
T 4fmz_A 67 NLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDIS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGA 141 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTT
T ss_pred CccEEEccCCccccchh--hhcCCcCCEEEccCCcccCch-HHcCCCcCCEEECcCCcccC-chh-hccCCceeEEECCC
Confidence 45555555555544322 555555555555544444443 35555555555555555552 222 55555555555555
Q ss_pred ccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCc
Q 002158 167 NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEI 246 (958)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 246 (958)
|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|.++. .
T Consensus 142 n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~--~ 214 (347)
T 4fmz_A 142 NHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD--I 214 (347)
T ss_dssp CTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC--C
T ss_pred CCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCC--C
Confidence 54332222 25555555555555555553222 4555555555555555553222 4555555555555555542 1
Q ss_pred cccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCC
Q 002158 247 PATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFL 326 (958)
Q Consensus 247 p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L 326 (958)
+. +..+++|+.|++++|++++.++ +..+++|++|++++|.+++ ++....+++|++|+|++|++++. ..+..+++|
T Consensus 215 ~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L 289 (347)
T 4fmz_A 215 TP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-INAVKDLTKLKMLNVGSNQISDI--SVLNNLSQL 289 (347)
T ss_dssp GG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTC
T ss_pred ch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC-ChhHhcCCCcCEEEccCCccCCC--hhhcCCCCC
Confidence 11 4555555555555555554443 5555555555555555552 33344445555555555555543 335555555
Q ss_pred CeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCC
Q 002158 327 QTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPI 387 (958)
Q Consensus 327 ~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l 387 (958)
+.|+|++|++++..|..+..+ +.|+.|++++|++++++....+++|+.|++++|++
T Consensus 290 ~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 290 NSLFLNNNQLGNEDMEVIGGL-----TNLTTLFLSQNHITDIRPLASLSKMDSADFANQVI 345 (347)
T ss_dssp SEEECCSSCCCGGGHHHHHTC-----TTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC--
T ss_pred CEEECcCCcCCCcChhHhhcc-----ccCCEEEccCCccccccChhhhhccceeehhhhcc
Confidence 555555555555544444432 23345555555555555433555555555555554
No 289
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=6.7e-29 Score=276.27 Aligned_cols=286 Identities=19% Similarity=0.269 Sum_probs=220.2
Q ss_pred EEEccCCcCCCCccccccCCCCcceeeccCcccCCCCc-cccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccccc
Q 002158 90 ELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPK-EIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENN 168 (958)
Q Consensus 90 ~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~-~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~ 168 (958)
.+++.++++.. +|..+. +.|+.|++++|....++. .|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 35 ~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 35 VVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp EEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 33444444443 444333 578888888766666654 68889999999999999997778889999999999999999
Q ss_pred ccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCcccc--CCCcccCCCCCccEEEccCCCCCCCCc
Q 002158 169 ITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSG--NLPPELSELPQLCILQLDNNNFSASEI 246 (958)
Q Consensus 169 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~L~~N~l~~~~~ 246 (958)
++ .+|..+. ++|++|++++|.+++..+..+.++++|+.|++++|++.. ..+..+..+++|++|++++|.++ .+
T Consensus 112 l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~--~l 186 (330)
T 1xku_A 112 LK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT--TI 186 (330)
T ss_dssp CS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC--SC
T ss_pred CC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc--cC
Confidence 88 5565554 789999999999998777888999999999999999863 67788889999999999999986 45
Q ss_pred cccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEccCCcCCCccchhccCCC
Q 002158 247 PATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDNYLNGSILESISNLP 324 (958)
Q Consensus 247 p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 324 (958)
|..+. ++|+.|+|++|++++..+ .+..+++|+.|+|++|.+++..+. ...+++|++|+|++|+|+ .+|..+..++
T Consensus 187 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 263 (330)
T 1xku_A 187 PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 263 (330)
T ss_dssp CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS
T ss_pred Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCC
Confidence 65543 789999999999998866 488899999999999999866553 455689999999999998 6777889999
Q ss_pred CCCeEeeecccCCCccchhhhccc-ccCccccceEeccCCCCCC--CccC-C-CCCCcceEEeCCCC
Q 002158 325 FLQTLSLENNFLTGSIPATIWQNK-SFSTKARLKIDLRNNSFSN--IVGD-L-TLPNNVTLRLGGNP 386 (958)
Q Consensus 325 ~L~~L~L~~N~l~~~ip~~l~~~~-~~~~~~l~~L~Ls~N~l~~--l~~~-~-~l~~L~~L~l~~N~ 386 (958)
+|++|+|++|+|++..+..+.... ......+..|++++|.+.. ++.. . .+.+++.++|++|+
T Consensus 264 ~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 264 YIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 999999999999854444433221 1224567789999999875 3332 2 78899999999984
No 290
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=3.2e-29 Score=301.70 Aligned_cols=308 Identities=20% Similarity=0.206 Sum_probs=258.5
Q ss_pred eeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCC-ccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEec
Q 002158 86 LHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIP-KEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQV 164 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip-~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 164 (958)
.+++.|+|.+|.+++..+..|+.+++|+.|++++|....+| ..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 47999999999999998889999999999999866555554 56899999999999999999655556799999999999
Q ss_pred ccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCC
Q 002158 165 DENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSAS 244 (958)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 244 (958)
++|.+++..|..|..+++|++|+|++|.+++. + +..+++|+.|++++|.+++ +...++|+.|++++|.++.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~- 225 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINV- 225 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C--GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCE-
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C--hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccc-
Confidence 99999999999999999999999999999964 3 5678899999999999875 3455789999999999963
Q ss_pred CccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCC
Q 002158 245 EIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNL 323 (958)
Q Consensus 245 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l 323 (958)
++..+ .++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++.+|.. ..+++|+.|+|++|.|++ +|..+..+
T Consensus 226 -~~~~~--~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 300 (597)
T 3oja_B 226 -VRGPV--NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPI 300 (597)
T ss_dssp -EECSC--CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCC
T ss_pred -ccccc--CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccC
Confidence 34333 36899999999999974 56889999999999999999876654 567999999999999997 46777889
Q ss_pred CCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCCCCCCCCCcccccC
Q 002158 324 PFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTSANIPNTGRFCGSD 403 (958)
Q Consensus 324 ~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 403 (958)
++|+.|+|++|.++ .+|..+..+ +.|+.|+|++|+|+.++ ...+++|+.|++++|||.|+|...++..+.
T Consensus 301 ~~L~~L~Ls~N~l~-~i~~~~~~l-----~~L~~L~L~~N~l~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~--- 370 (597)
T 3oja_B 301 PTLKVLDLSHNHLL-HVERNQPQF-----DRLENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALFRNVA--- 370 (597)
T ss_dssp TTCCEEECCSSCCC-CCGGGHHHH-----TTCSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHTTTCC---
T ss_pred CCCcEEECCCCCCC-ccCcccccC-----CCCCEEECCCCCCCCcC-hhhcCCCCEEEeeCCCCCChhHHHHHHHHh---
Confidence 99999999999999 788887655 45669999999999885 447899999999999999987544433222
Q ss_pred CCCCccccccCCCCCCC
Q 002158 404 AGGDETLTNSKVNCPVQ 420 (958)
Q Consensus 404 ~~~~~~L~~n~~~C~c~ 420 (958)
...+.+++..|...
T Consensus 371 ---~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 371 ---RPAVDDADQHCKID 384 (597)
T ss_dssp ---TTTBCCCCCCCCTT
T ss_pred ---hhccccccccCCcc
Confidence 23345666667653
No 291
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.7e-28 Score=273.06 Aligned_cols=264 Identities=22% Similarity=0.288 Sum_probs=140.0
Q ss_pred CCCCCCceeeCccc----cCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCC-CccccCCCCCcEEEee
Q 002158 67 CMSNWTGVLCFDTV----ETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTI-PKEIGNISSLIFLLLN 141 (958)
Q Consensus 67 c~~~w~gV~C~~~~----~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L~Ls 141 (958)
|.|+|+.+.|.+.. +......++.|+|++|++++..+..|+++++|++|++++|....+ |..|.++++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 44455555554311 111223455556666555555555555566666665554433333 5555556666666666
Q ss_pred CCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEeccccccc--ccCchhhcCCccchhhhccCCcccc
Q 002158 142 GNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIG--GQIPSELSKLSTLIHLLVDNNNLSG 219 (958)
Q Consensus 142 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~ 219 (958)
+|.++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++ +..+..+.++++|++|++++|+++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 66555 4444333 45666666666655555555555566666666666554 2445555555566666666665553
Q ss_pred CCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCCCCC
Q 002158 220 NLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPSKKL 298 (958)
Q Consensus 220 ~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 298 (958)
+|..+. ++|++|+|++|+++. ..+..+..+++|+.|+|++|++++.++ .+..+++|++|+|++|+++........
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITK-VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCE-ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCc-cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhcc
Confidence 333332 555666666665542 234455555566666666666555544 255555566666666655522222334
Q ss_pred CCCcCEEEccCCcCCCccchhccCC------CCCCeEeeecccCC
Q 002158 299 SENVTTIDLSDNYLNGSILESISNL------PFLQTLSLENNFLT 337 (958)
Q Consensus 299 ~~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~ 337 (958)
+++|++|+|++|+|++..+..|... +.|+.|++++|++.
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 4556666666666655555555432 45555666666554
No 292
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=2.1e-28 Score=285.65 Aligned_cols=302 Identities=26% Similarity=0.326 Sum_probs=191.4
Q ss_pred eeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecc
Q 002158 86 LHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVD 165 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 165 (958)
.+++.|+|++|.+++..+ ++++++|++|++++|....++. ++++++|++|+|++|.+++. +. +.++++|++|+++
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~ 142 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLELS 142 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh-hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEECC
Confidence 468899999998887654 8899999999998877777776 88999999999999999854 43 8889999999999
Q ss_pred cccccccCcc--------------------ccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCccc
Q 002158 166 ENNITGTIPK--------------------SFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPEL 225 (958)
Q Consensus 166 ~N~l~~~~p~--------------------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l 225 (958)
+|.+++. +. .+.++++|+.|++++|.+++. ..+..+++|++|++++|++++..+ +
T Consensus 143 ~n~l~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 217 (466)
T 1o6v_A 143 SNTISDI-SALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--L 217 (466)
T ss_dssp EEEECCC-GGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CCccCCC-hhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--c
Confidence 9988753 21 134445555555555555532 235555566666666666554433 4
Q ss_pred CCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEE
Q 002158 226 SELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTI 305 (958)
Q Consensus 226 ~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L 305 (958)
..+++|++|++++|+++. + ..+..+++|+.|++++|.+++.++ +..+++|+.|++++|.+++..+ ...+++|+.|
T Consensus 218 ~~l~~L~~L~l~~n~l~~--~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L 292 (466)
T 1o6v_A 218 GILTNLDELSLNGNQLKD--I-GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTALTNL 292 (466)
T ss_dssp GGCTTCCEEECCSSCCCC--C-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEE
T ss_pred cccCCCCEEECCCCCccc--c-hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCccCeE
Confidence 555666666666666542 1 245556666666666666665544 5666666666666666664332 4455666666
Q ss_pred EccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCC
Q 002158 306 DLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGN 385 (958)
Q Consensus 306 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N 385 (958)
+|++|++++..+ +..+++|+.|+|++|++++..| +.. .+.|+.|++++|++++++....+++|+.|++++|
T Consensus 293 ~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~-----l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSS-----LTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHN 363 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGG-----CTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSS
T ss_pred EcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hcc-----CccCCEeECCCCccCCchhhccCCCCCEEeCCCC
Confidence 666666665443 5666666666666666665444 221 2345566666666666654446666667777666
Q ss_pred CCCCCCCCCCCCcccccCCCCCccccccCCCC
Q 002158 386 PICTSANIPNTGRFCGSDAGGDETLTNSKVNC 417 (958)
Q Consensus 386 ~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C 417 (958)
++..... +........+.+.+|+|..
T Consensus 364 ~l~~~~~------~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 364 QISDLTP------LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCCBCGG------GTTCTTCCEEECCCEEEEC
T ss_pred ccCccch------hhcCCCCCEEeccCCcccC
Confidence 6643221 2222334455566665543
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=8.4e-29 Score=275.69 Aligned_cols=287 Identities=20% Similarity=0.287 Sum_probs=222.8
Q ss_pred eEEEEccCCcCCCCccccccCCCCcceeeccCcccCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccc
Q 002158 88 VRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDE 166 (958)
Q Consensus 88 v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 166 (958)
++.+++.+++++ .+|..+. ++|+.|++++|....+ |..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 344555555655 4555543 6788888886665555 45788999999999999999977788899999999999999
Q ss_pred ccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccc--cCCCcccCCCCCccEEEccCCCCCCC
Q 002158 167 NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLS--GNLPPELSELPQLCILQLDNNNFSAS 244 (958)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~~ 244 (958)
|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++ +..+..+..+ +|++|++++|+++.
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 9988 5665554 78999999999999777777889999999999999986 4677888888 99999999999863
Q ss_pred CccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEccCCcCCCccchhccC
Q 002158 245 EIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDNYLNGSILESISN 322 (958)
Q Consensus 245 ~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 322 (958)
+|..+. ++|++|+|++|++++.++ .+..+++|+.|+|++|.+++..+. ...+++|++|+|++|+|+ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 566544 789999999999998876 488999999999999999866553 455689999999999998 67777999
Q ss_pred CCCCCeEeeecccCCCccchhhhccc-ccCccccceEeccCCCCC--CCccCC--CCCCcceEEeCCCC
Q 002158 323 LPFLQTLSLENNFLTGSIPATIWQNK-SFSTKARLKIDLRNNSFS--NIVGDL--TLPNNVTLRLGGNP 386 (958)
Q Consensus 323 l~~L~~L~L~~N~l~~~ip~~l~~~~-~~~~~~l~~L~Ls~N~l~--~l~~~~--~l~~L~~L~l~~N~ 386 (958)
+++|+.|+|++|+|++..+..+.... ......++.|++++|.+. .+.... .+++|+.|++++|.
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 99999999999999854444443321 122456789999999998 444433 78999999999984
No 294
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=4.7e-29 Score=302.86 Aligned_cols=331 Identities=19% Similarity=0.190 Sum_probs=256.2
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCc-cccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEe
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPK-EIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQ 163 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~-~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 163 (958)
..+++.|+|++|++++..+..|.+|++|++|++++|....+|. .|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 75 l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 4579999999999999888899999999999999887777775 589999999999999999977777899999999999
Q ss_pred cccccccc-cCccccccccccceEecccccccccCchhhcCCcc------------------------------------
Q 002158 164 VDENNITG-TIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLST------------------------------------ 206 (958)
Q Consensus 164 L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~------------------------------------ 206 (958)
|++|++++ .+|..+..+++|++|+|++|+|++..+..+..+.+
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 99999986 46788899999999999999988665554332211
Q ss_pred --------------------------------------------------------------------------------
Q 002158 207 -------------------------------------------------------------------------------- 206 (958)
Q Consensus 207 -------------------------------------------------------------------------------- 206 (958)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred ---------------chhhhccCCccccCCCc-------------------ccCCCCCccEEEccCCCCCC---------
Q 002158 207 ---------------LIHLLVDNNNLSGNLPP-------------------ELSELPQLCILQLDNNNFSA--------- 243 (958)
Q Consensus 207 ---------------L~~L~L~~N~l~~~~~~-------------------~l~~l~~L~~L~L~~N~l~~--------- 243 (958)
|+.|++.+|.+....+. ....+++|+.|++++|.+..
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 12222333322211111 11245677777777776631
Q ss_pred ----------------------------------------CCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEE
Q 002158 244 ----------------------------------------SEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYL 282 (958)
Q Consensus 244 ----------------------------------------~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L 282 (958)
...+..+..+.+|+.++++.|.+.+..+. +..+++|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 01123456778889999999999988875 8889999999
Q ss_pred eccCCcCCC-cCCC-CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEec
Q 002158 283 DLSWNHLTG-SIPS-KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDL 360 (958)
Q Consensus 283 ~Ls~N~l~~-~~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~L 360 (958)
+|++|.+.. .+|. ...+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+ +.|+.|||
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l-----~~L~~L~L 549 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL-----NSLQVLDY 549 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTC-----TTCCEEEC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCC-----CCCCEEEC
Confidence 999998643 3444 3556899999999999999999999999999999999999997767666544 45679999
Q ss_pred cCCCCCCCccCC--CC-CCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCC
Q 002158 361 RNNSFSNIVGDL--TL-PNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQAC 422 (958)
Q Consensus 361 s~N~l~~l~~~~--~l-~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~ 422 (958)
++|+|+.++... .+ ++|+.|+|++|||.|+|++.|+..+........ .....+.|.-+..
T Consensus 550 s~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~~~~~~~--~~~~~~~C~~P~~ 612 (635)
T 4g8a_A 550 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLL--VEVERMECATPSD 612 (635)
T ss_dssp TTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHHHTTTTB--SCGGGCBBCSSTT
T ss_pred CCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHHhCCCcc--CCCCCceeCCchH
Confidence 999999987664 55 689999999999999999988887765433222 2234566766543
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=1.6e-28 Score=273.52 Aligned_cols=264 Identities=23% Similarity=0.284 Sum_probs=153.3
Q ss_pred CcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEeccc
Q 002158 111 RLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNN 190 (958)
Q Consensus 111 ~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 190 (958)
+|+.++++++....+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cCCEEECCCCCccccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 45555565555555665543 4566666666666655555566666666666666666655566666666666666666
Q ss_pred ccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC-CCccccccCCCCCCEEEcccCCCCCC
Q 002158 191 NSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA-SEIPATYGNFSKLVKLSLRNCNLQGA 269 (958)
Q Consensus 191 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~p~~~~~l~~L~~L~L~~N~l~~~ 269 (958)
|.++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++. ...+..+..+ +|+.|++++|++++.
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l 187 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGI 187 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSC
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCcc
Confidence 6666 3443333 566666666666665555556666666666666666642 1334455555 666666666666655
Q ss_pred CCCCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhccc
Q 002158 270 VPDLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNK 348 (958)
Q Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~ 348 (958)
+..+. ++|++|+|++|.+++..+. ...+++|+.|+|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+
T Consensus 188 ~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l- 263 (332)
T 2ft3_A 188 PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL- 263 (332)
T ss_dssp CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC-
T ss_pred Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC-
Confidence 44433 4666666666666644332 234456666666666666666666666666666666666666 555554433
Q ss_pred ccCccccceEeccCCCCCCCccCC--------CCCCcceEEeCCCCCC
Q 002158 349 SFSTKARLKIDLRNNSFSNIVGDL--------TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 349 ~~~~~~l~~L~Ls~N~l~~l~~~~--------~l~~L~~L~l~~N~l~ 388 (958)
+.|+.|++++|+|++++... ..+.|+.|++.+||+.
T Consensus 264 ----~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 264 ----KLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp ----TTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred ----ccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 23446666666666655432 1345566666666664
No 296
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=5.3e-28 Score=270.98 Aligned_cols=299 Identities=21% Similarity=0.301 Sum_probs=251.0
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccc
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDE 166 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 166 (958)
+++.|++.++.+... +.+..+++|++|++++|....+|. +.++++|++|+|++|.+++ +| .+..+++|++|++++
T Consensus 45 ~L~~L~l~~~~i~~~--~~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~ 119 (347)
T 4fmz_A 45 SITKLVVAGEKVASI--QGIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNE 119 (347)
T ss_dssp TCSEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTT
T ss_pred cccEEEEeCCccccc--hhhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcC
Confidence 689999999998764 348999999999999888888877 9999999999999999984 54 699999999999999
Q ss_pred ccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCc
Q 002158 167 NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEI 246 (958)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 246 (958)
|++++. +. +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.++. +
T Consensus 120 n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~--~ 192 (347)
T 4fmz_A 120 DNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED--I 192 (347)
T ss_dssp SCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC--C
T ss_pred CcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc--c
Confidence 999954 33 8999999999999997664554 49999999999999999986544 8899999999999999963 3
Q ss_pred cccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCC
Q 002158 247 PATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFL 326 (958)
Q Consensus 247 p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L 326 (958)
+. +..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++..+ ...+++|++|+|++|.+++. ..+..+++|
T Consensus 193 ~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L 267 (347)
T 4fmz_A 193 SP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKL 267 (347)
T ss_dssp GG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred cc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCc
Confidence 44 8899999999999999997765 8889999999999999985444 67779999999999999875 579999999
Q ss_pred CeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCCcccccCC
Q 002158 327 QTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTGRFCGSDA 404 (958)
Q Consensus 327 ~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 404 (958)
++|++++|++++ +| .+.. .+.++.|++++|+++...... .+++|+.|++++|++..... +.....
T Consensus 268 ~~L~l~~n~l~~-~~-~~~~-----l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~------~~~l~~ 334 (347)
T 4fmz_A 268 KMLNVGSNQISD-IS-VLNN-----LSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP------LASLSK 334 (347)
T ss_dssp CEEECCSSCCCC-CG-GGGG-----CTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG------GGGCTT
T ss_pred CEEEccCCccCC-Ch-hhcC-----CCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC------hhhhhc
Confidence 999999999995 33 2332 356789999999999876553 89999999999999976432 333445
Q ss_pred CCCccccccCC
Q 002158 405 GGDETLTNSKV 415 (958)
Q Consensus 405 ~~~~~L~~n~~ 415 (958)
.+.+.+.+|++
T Consensus 335 L~~L~l~~N~i 345 (347)
T 4fmz_A 335 MDSADFANQVI 345 (347)
T ss_dssp CSEESSSCC--
T ss_pred cceeehhhhcc
Confidence 56677777764
No 297
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=1.3e-27 Score=277.16 Aligned_cols=232 Identities=22% Similarity=0.220 Sum_probs=143.8
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccc
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDE 166 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 166 (958)
+++.|+++++++++. | .++.+++|++|++++|....+| ++++++|++|+|++|.+++. + ++++++|++|++++
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~ 115 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDT 115 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCS
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCC
Confidence 466777777777664 3 5677777777777666555554 66777777777777777643 3 66777777777777
Q ss_pred ccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCc
Q 002158 167 NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEI 246 (958)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 246 (958)
|++++. + +..+++|++|++++|++++ ++ ++.+++|++|++++|+..+.+ .+..+++|++|++++|+++. +
T Consensus 116 N~l~~l-~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~--l 185 (457)
T 3bz5_A 116 NKLTKL-D--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE--L 185 (457)
T ss_dssp SCCSCC-C--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC--C
T ss_pred CcCCee-c--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce--e
Confidence 777653 3 6667777777777777775 32 566666777777666444333 35666666666666666653 3
Q ss_pred cccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCC--
Q 002158 247 PATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLP-- 324 (958)
Q Consensus 247 p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~-- 324 (958)
| +..+++|+.|++++|++++. .+..+++|++|+|++|++++ +| ...+++|+.|+|++|++++..+..+..+.
T Consensus 186 ~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L 259 (457)
T 3bz5_A 186 D--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLTELDVSTLSKLTTL 259 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCSCCCCTTCTTCCEE
T ss_pred c--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCCCcCHHHCCCCCEE
Confidence 3 55666666666666666654 35666666666666666664 34 44456666666666666665544444433
Q ss_pred -----CCCeEeeecccCCCccc
Q 002158 325 -----FLQTLSLENNFLTGSIP 341 (958)
Q Consensus 325 -----~L~~L~L~~N~l~~~ip 341 (958)
+|+.|++++|.+.+.+|
T Consensus 260 ~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 260 HCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp ECTTCCCSCCCCTTCTTCCEEE
T ss_pred eccCCCCCEEECCCCccCCccc
Confidence 33444444444444443
No 298
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.95 E-value=4.4e-27 Score=274.47 Aligned_cols=277 Identities=27% Similarity=0.347 Sum_probs=187.1
Q ss_pred eeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecc
Q 002158 86 LHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVD 165 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 165 (958)
.+++.|++.++++.. ++ .+..+++|++|++++|....+|. +.++++|++|+|++|.+++..+ ++++++|++|+++
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 368999999998876 33 58899999999999888888877 9999999999999999995544 9999999999999
Q ss_pred cccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCC
Q 002158 166 ENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASE 245 (958)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 245 (958)
+|++++..+ +.++++|++|+|++|.+++ ++ .+..+++|+.|+++ |.+.+.. .+..+++|++|++++|.++.
T Consensus 121 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~-- 191 (466)
T 1o6v_A 121 NNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD-- 191 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC--
T ss_pred CCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC--
Confidence 999996543 9999999999999999985 43 36666666666664 3443322 26666666666666666642
Q ss_pred ccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCC
Q 002158 246 IPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPF 325 (958)
Q Consensus 246 ~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 325 (958)
+ ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++ ++....+++|+.|+|++|.+++..+ +..+++
T Consensus 192 ~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 266 (466)
T 1o6v_A 192 I-SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKD-IGTLASLTNLTDLDLANNQISNLAP--LSGLTK 266 (466)
T ss_dssp C-GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCGG--GTTCTT
T ss_pred C-hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCccc-chhhhcCCCCCEEECCCCccccchh--hhcCCC
Confidence 2 235566666666666666665443 4555666666666666652 3344445566666666666655443 555666
Q ss_pred CCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCC
Q 002158 326 LQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPIC 388 (958)
Q Consensus 326 L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~ 388 (958)
|+.|+|++|.+++..| +.. .+.|+.|+|++|++++++....+++|+.|++++|++.
T Consensus 267 L~~L~l~~n~l~~~~~--~~~-----l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~ 322 (466)
T 1o6v_A 267 LTELKLGANQISNISP--LAG-----LTALTNLELNENQLEDISPISNLKNLTYLTLYFNNIS 322 (466)
T ss_dssp CSEEECCSSCCCCCGG--GTT-----CTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCS
T ss_pred CCEEECCCCccCcccc--ccC-----CCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCC
Confidence 6666666666654322 221 2344455555555555554345555555555555554
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=9.3e-28 Score=261.12 Aligned_cols=253 Identities=22% Similarity=0.242 Sum_probs=174.5
Q ss_pred cEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCC
Q 002158 136 IFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNN 215 (958)
Q Consensus 136 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 215 (958)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666666666 455433 356667777777666555566666677777777777766666666666777777777777
Q ss_pred c-cccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcC
Q 002158 216 N-LSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSI 293 (958)
Q Consensus 216 ~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~ 293 (958)
+ +....+..+..+++|++|+|++|+++ ...+..+.++++|++|+|++|++++.++. +..+++|++|+|++|++++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCC-EECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 5 66555666777777777777777775 23355667777777777777777766654 677777777777777777444
Q ss_pred CC-CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC
Q 002158 294 PS-KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL 372 (958)
Q Consensus 294 ~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~ 372 (958)
+. ...+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..+..+.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--------------------------- 222 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALA--------------------------- 222 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHT---------------------------
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcc---------------------------
Confidence 33 34457777777777777777777888888888888888888753333331
Q ss_pred CCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCCCceeeeeceee
Q 002158 373 TLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPEPCFCAAPLRIG 447 (958)
Q Consensus 373 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~~~~c~sp~~~~ 447 (958)
.+++|+.|++++||| .|+|+..++..|++..........|..|...+
T Consensus 223 ~l~~L~~L~l~~N~~----------------------------~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 223 PLRALQYLRLNDNPW----------------------------VCDCRARPLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp TCTTCCEEECCSSCE----------------------------ECSGGGHHHHHHHHHCCSEECCCBEEESGGGT
T ss_pred cCcccCEEeccCCCc----------------------------cCCCCcHHHHHHHHhcccccCccccCCchHhC
Confidence 456777888888877 67888888888988877777778899997643
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.3e-27 Score=274.44 Aligned_cols=203 Identities=22% Similarity=0.247 Sum_probs=102.8
Q ss_pred CCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhcc
Q 002158 134 SLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVD 213 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 213 (958)
+|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 44555555555554444455555555555555555554444555555555555555555554444445555555555555
Q ss_pred CCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcC
Q 002158 214 NNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSI 293 (958)
Q Consensus 214 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 293 (958)
+|+|+...+..|..+++|++|+|++|+......+..|.++++|+.|+|++|++++. +.+..+++|+.|+|++|.+++..
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~ 234 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIR 234 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEEC
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccC
Confidence 55555444445555555555555553222111122455555555555555555543 33455555555555555555433
Q ss_pred CCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCC
Q 002158 294 PSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLT 337 (958)
Q Consensus 294 ~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 337 (958)
+.. ..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+
T Consensus 235 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCC
Confidence 322 33455555555555555555555555555555555555555
No 301
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.6e-28 Score=291.26 Aligned_cols=183 Identities=17% Similarity=0.111 Sum_probs=128.6
Q ss_pred eeeeCCeEEEEEEEC-CCcEEEEEEeccCC----------hhcHHHHHHHHHHHHcc-CCCCcceEEEEEEeCCeEEEEE
Q 002158 633 VGQGGYGKVYKGILS-DNTTVAIKRAEEGS----------LQGQNEFLTEIKLLSRL-HHRNLVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 633 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 700 (958)
.+.|++|.+..++.. -|+.||||++.... ....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 456667666655432 58889999986532 12235699999999999 7999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCC
Q 002158 701 EFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLD 780 (958)
Q Consensus 701 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 780 (958)
||++|++|.++|.... +++.. +|+.||++||+|+|++| ||||||||+|||++++|.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999997654 35544 58899999999999999 9999999999999999999999999998653211
Q ss_pred CCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCC
Q 002158 781 DEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQ 831 (958)
Q Consensus 781 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~ 831 (958)
.......||++|||||++.+ .+..++|+||+|++++++.++..
T Consensus 394 -------~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 394 -------SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp -------CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred -------ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 12234679999999999865 46778999999999887766543
No 302
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=4.1e-27 Score=280.99 Aligned_cols=287 Identities=24% Similarity=0.284 Sum_probs=232.3
Q ss_pred cccCCCCCCCCCCCCCCceeeCccccCC-CceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCC
Q 002158 56 NHLRNWNKGDPCMSNWTGVLCFDTVETD-GHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISS 134 (958)
Q Consensus 56 ~~l~~W~~~~~c~~~w~gV~C~~~~~~~-~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~ 134 (958)
..++.|....+|| .|+|..|.-..... ....++.|++++++++ .+|..+. ++|+.|++++|....+|. .+++
T Consensus 10 ~~w~~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~ 82 (622)
T 3g06_A 10 AVWSAWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---LPPE 82 (622)
T ss_dssp CHHHHHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC---CCTT
T ss_pred HHHHHHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC---cCCC
Confidence 3456787666654 78765432100000 0124889999999998 6777666 899999999888888988 6789
Q ss_pred CcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccC
Q 002158 135 LIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDN 214 (958)
Q Consensus 135 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 214 (958)
|++|+|++|.++ .+|. .+++|++|+|++|++++ +|. .+++|+.|+|++|+|++ +|.. +++|++|+|++
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~ 150 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSD 150 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCS
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcC
Confidence 999999999999 5776 78999999999999995 454 57899999999999994 6653 48999999999
Q ss_pred CccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCC
Q 002158 215 NNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIP 294 (958)
Q Consensus 215 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 294 (958)
|++++. |. .+++|+.|++++|.++. +| ..+++|+.|+|++|+|++++.. +++|+.|++++|.++ .+|
T Consensus 151 N~l~~l-~~---~~~~L~~L~L~~N~l~~--l~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~l~ 217 (622)
T 3g06_A 151 NQLASL-PA---LPSELCKLWAYNNQLTS--LP---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLP 217 (622)
T ss_dssp SCCSCC-CC---CCTTCCEEECCSSCCSC--CC---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-SCC
T ss_pred CcCCCc-CC---ccCCCCEEECCCCCCCC--Cc---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccc-ccC
Confidence 999963 43 35789999999999974 55 5578999999999999986653 478999999999998 455
Q ss_pred CCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC-C
Q 002158 295 SKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL-T 373 (958)
Q Consensus 295 ~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~-~ 373 (958)
. .+++|+.|+|++|+|++.. ..+++|+.|+|++|.|+ .+|. ..+.|+.|+|++|+|+.++... .
T Consensus 218 ~--~~~~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~-~lp~--------~~~~L~~L~Ls~N~L~~lp~~l~~ 282 (622)
T 3g06_A 218 A--LPSGLKELIVSGNRLTSLP----VLPSELKELMVSGNRLT-SLPM--------LPSGLLSLSVYRNQLTRLPESLIH 282 (622)
T ss_dssp C--CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-CCCC--------CCTTCCEEECCSSCCCSCCGGGGG
T ss_pred C--CCCCCCEEEccCCccCcCC----CCCCcCcEEECCCCCCC-cCCc--------ccccCcEEeCCCCCCCcCCHHHhh
Confidence 3 3589999999999999743 56799999999999999 6776 2356889999999999998766 8
Q ss_pred CCCcceEEeCCCCCCC
Q 002158 374 LPNNVTLRLGGNPICT 389 (958)
Q Consensus 374 l~~L~~L~l~~N~l~~ 389 (958)
+++|+.|+|++|++..
T Consensus 283 l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 283 LSSETTVNLEGNPLSE 298 (622)
T ss_dssp SCTTCEEECCSCCCCH
T ss_pred ccccCEEEecCCCCCC
Confidence 9999999999999953
No 303
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.2e-28 Score=269.71 Aligned_cols=243 Identities=21% Similarity=0.222 Sum_probs=167.3
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCccc--CCCCcccc-------CCCCCcEEEeeCCCCCCCCChhh--cC
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLT--GTIPKEIG-------NISSLIFLLLNGNKLSGSLPDEL--GY 155 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~--~~ip~~i~-------~l~~L~~L~Ls~n~l~~~~p~~l--~~ 155 (958)
+++.|++.+|.+ .+|..+... |+.|+++++.. ..+|..+. ++++|++|+|++|.+++.+|..+ ..
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 466667777777 566655544 77777765443 34666555 67778888888887777777765 67
Q ss_pred CCCCCEEecccccccccCccccccc-----cccceEecccccccccCchhhcCCccchhhhccCCccccC--CCccc--C
Q 002158 156 LSNLNRLQVDENNITGTIPKSFANL-----SRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGN--LPPEL--S 226 (958)
Q Consensus 156 l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~~~l--~ 226 (958)
+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|..+++|++|+|++|++.+. .+..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 77788888888877765 6667666 7777788888877776667777777777777777776653 22333 6
Q ss_pred CCCCccEEEccCCCCCCC-Ccc-ccccCCCCCCEEEcccCCCCCCCC--CCCCCCCcCEEeccCCcCCCcCCCCCCCCCc
Q 002158 227 ELPQLCILQLDNNNFSAS-EIP-ATYGNFSKLVKLSLRNCNLQGAVP--DLSRIPNLYYLDLSWNHLTGSIPSKKLSENV 302 (958)
Q Consensus 227 ~l~~L~~L~L~~N~l~~~-~~p-~~~~~l~~L~~L~L~~N~l~~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L 302 (958)
.+++|++|+|++|+++.. .++ ..+.++++|+.|+|++|++++.++ .+..+++|++|+|++|+|+ .+|.... ++|
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L 276 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AKL 276 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CCc
Confidence 777777777777777521 112 234566777777777777777653 3566777777777777777 5555444 677
Q ss_pred CEEEccCCcCCCccchhccCCCCCCeEeeecccCCC
Q 002158 303 TTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTG 338 (958)
Q Consensus 303 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 338 (958)
++|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7777777777766 44 7777777777777777764
No 304
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=7.7e-26 Score=262.02 Aligned_cols=265 Identities=26% Similarity=0.320 Sum_probs=145.6
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccc
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDE 166 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 166 (958)
+++.|++++|.+++ +|.. +++|+.|++++|....+|... ++|++|+|++|.+++ +| .++++++|++|++++
T Consensus 92 ~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~~---~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~ 162 (454)
T 1jl5_A 92 HLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDLP---PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDN 162 (454)
T ss_dssp TCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCCC---CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCC
Confidence 56777777777776 4432 356666666655544444311 466666666666663 55 366666666666666
Q ss_pred ccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCc
Q 002158 167 NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEI 246 (958)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 246 (958)
|++++ +|..+ .+|++|++++|++++ +| .+.++++|+.|++++|++++ +|... ++|++|++++|+++ .+
T Consensus 163 N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~--~l 230 (454)
T 1jl5_A 163 NSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE--EL 230 (454)
T ss_dssp SCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS--SC
T ss_pred CcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC--cc
Confidence 66663 44332 366666666666664 44 36666666666666666664 22221 45666666666664 34
Q ss_pred cccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCc--cchh-----
Q 002158 247 PATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGS--ILES----- 319 (958)
Q Consensus 247 p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~--~~~~----- 319 (958)
|. ++.+++|+.|++++|++++.+.. +++|+.|++++|++++ +|.. +++|+.|+|++|++++. .|..
T Consensus 231 p~-~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~--~~~L~~L~ls~N~l~~l~~~~~~L~~L~ 303 (454)
T 1jl5_A 231 PE-LQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPEL--PQSLTFLDVSENIFSGLSELPPNLYYLN 303 (454)
T ss_dssp CC-CTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSEESCCCTTCCEEE
T ss_pred cc-cCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCcc--cCcCCEEECcCCccCcccCcCCcCCEEE
Confidence 42 55666666666666666654321 2455566666665553 2221 24555555555555541 1100
Q ss_pred --------ccCC-CCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCC
Q 002158 320 --------ISNL-PFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTS 390 (958)
Q Consensus 320 --------~~~l-~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~ 390 (958)
+..+ ++|+.|++++|++++ +|.. .+.++.|++++|+++.++. .+++|+.|++++|++.+.
T Consensus 304 l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~--------~~~L~~L~L~~N~l~~lp~--~l~~L~~L~L~~N~l~~l 372 (454)
T 1jl5_A 304 ASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL--------PPRLERLIASFNHLAEVPE--LPQNLKQLHVEYNPLREF 372 (454)
T ss_dssp CCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC--------CTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCSSC
T ss_pred CcCCcCCcccCCcCcCCEEECCCCcccc-cccc--------CCcCCEEECCCCccccccc--hhhhccEEECCCCCCCcC
Confidence 1122 355556666665553 4432 1345566666666666555 456666666666666553
No 305
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=1.6e-26 Score=267.64 Aligned_cols=287 Identities=23% Similarity=0.304 Sum_probs=213.3
Q ss_pred ceeeEEEEccCCcCCCCccccccCCCCcceeecc-CcccCCCCccccCCCCC-------------cEEEeeCCCCCCCCC
Q 002158 85 HLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMW-NDLTGTIPKEIGNISSL-------------IFLLLNGNKLSGSLP 150 (958)
Q Consensus 85 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~-n~~~~~ip~~i~~l~~L-------------~~L~Ls~n~l~~~~p 150 (958)
..++++|++++|++ |.+|+++++|++|++|+++ |.+.|.+|..++++++| ++|++++|.+++ +|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 35789999999999 8999999999999999987 55678999999998875 999999999995 55
Q ss_pred hhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCC
Q 002158 151 DELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQ 230 (958)
Q Consensus 151 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 230 (958)
.. .++|++|++++|++++ +|.. +++|++|++++|++++ ++.. .++|++|++++|++++ +| .+..+++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 42 4789999999999996 6654 4799999999999995 4432 2689999999999996 66 6999999
Q ss_pred ccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCC
Q 002158 231 LCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDN 310 (958)
Q Consensus 231 L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N 310 (958)
|++|++++|+++. +|..+ .+|++|++++|++++.+ .+..+++|+.|++++|.+++ +|.. ..+|++|+|++|
T Consensus 155 L~~L~l~~N~l~~--lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~-l~~~--~~~L~~L~l~~n 225 (454)
T 1jl5_A 155 LKIIDVDNNSLKK--LPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKK-LPDL--PLSLESIVAGNN 225 (454)
T ss_dssp CCEEECCSSCCSC--CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS-CCCC--CTTCCEEECCSS
T ss_pred CCEEECCCCcCcc--cCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCc-CCCC--cCcccEEECcCC
Confidence 9999999999973 56543 58999999999999854 79999999999999999985 4432 369999999999
Q ss_pred cCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCC
Q 002158 311 YLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTS 390 (958)
Q Consensus 311 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~ 390 (958)
.++ .+| .+..+++|++|++++|++++ +|.. ...++.|++++|+++.++.. +++|+.|++++|.+...
T Consensus 226 ~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~--------~~~L~~L~l~~N~l~~l~~~--~~~L~~L~ls~N~l~~l 292 (454)
T 1jl5_A 226 ILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL--------PPSLEALNVRDNYLTDLPEL--PQSLTFLDVSENIFSGL 292 (454)
T ss_dssp CCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC--------CTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCSEE
T ss_pred cCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc--------ccccCEEECCCCcccccCcc--cCcCCEEECcCCccCcc
Confidence 999 455 48999999999999999984 5542 25678999999999987764 48899999999988653
Q ss_pred CCCCCCCcccccCCCCCccccccCCC
Q 002158 391 ANIPNTGRFCGSDAGGDETLTNSKVN 416 (958)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~L~~n~~~ 416 (958)
+..+ .....+.+.+|.+.
T Consensus 293 ~~~~--------~~L~~L~l~~N~l~ 310 (454)
T 1jl5_A 293 SELP--------PNLYYLNASSNEIR 310 (454)
T ss_dssp SCCC--------TTCCEEECCSSCCS
T ss_pred cCcC--------CcCCEEECcCCcCC
Confidence 3222 23445566666554
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=1.5e-26 Score=256.64 Aligned_cols=232 Identities=21% Similarity=0.241 Sum_probs=170.6
Q ss_pred eeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecc
Q 002158 86 LHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVD 165 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 165 (958)
.+++.|+|+++++. .+|+.++++++|++|++++|....+|..++++++|++|+|++|.++ .+|..++++++|++|+|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 37999999999998 7888999999999999998877799999999999999999999999 889999999999999999
Q ss_pred cccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCC
Q 002158 166 ENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASE 245 (958)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 245 (958)
+|++.+.+|..+... ..+..+.++++|++|+|++|+++ .+|..+..+++|++|+|++|+++ .
T Consensus 159 ~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~--~ 220 (328)
T 4fcg_A 159 ACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS--A 220 (328)
T ss_dssp EETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC--C
T ss_pred CCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC--c
Confidence 999998999877640 01122334444444444444444 34444445555555555555553 2
Q ss_pred ccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCC
Q 002158 246 IPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNL 323 (958)
Q Consensus 246 ~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l 323 (958)
+|..+..+++|+.|+|++|.+.+..+. +..+++|++|+|++|++.+.+|.. ..+++|++|+|++|++.+.+|..+.++
T Consensus 221 l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L 300 (328)
T 4fcg_A 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300 (328)
T ss_dssp CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGS
T ss_pred CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhc
Confidence 344455555556666665555555543 666667777777776666666643 445778888888888888888899999
Q ss_pred CCCCeEeeecccCC
Q 002158 324 PFLQTLSLENNFLT 337 (958)
Q Consensus 324 ~~L~~L~L~~N~l~ 337 (958)
++|+.+++..|.+.
T Consensus 301 ~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 301 PANCIILVPPHLQA 314 (328)
T ss_dssp CTTCEEECCGGGSC
T ss_pred cCceEEeCCHHHHH
Confidence 99999999888776
No 307
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=8.3e-26 Score=261.94 Aligned_cols=268 Identities=20% Similarity=0.152 Sum_probs=216.1
Q ss_pred cCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccc
Q 002158 97 NLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKS 176 (958)
Q Consensus 97 ~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 176 (958)
+..+..+..++++++|+.|+++++....+| .++.+++|++|+|++|.+++ +| ++.+++|++|++++|++++. +
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITDMT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCCCT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred CcCcccccChhHcCCCCEEEccCCCcccCh-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--
Confidence 444555668899999999999988777777 79999999999999999996 45 89999999999999999975 3
Q ss_pred cccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCC
Q 002158 177 FANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKL 256 (958)
Q Consensus 177 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L 256 (958)
++++++|++|+|++|++++ ++ +..+++|++|++++|++++. .+..+++|++|++++|+..+ .+ .+..+++|
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~-~~--~~~~l~~L 172 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKIT-KL--DVTPQTQL 172 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCC-CC--CCTTCTTC
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccc-cc--ccccCCcC
Confidence 8999999999999999996 45 89999999999999999974 38899999999999996542 33 58889999
Q ss_pred CEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccC
Q 002158 257 VKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFL 336 (958)
Q Consensus 257 ~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 336 (958)
+.|++++|++++.+ +..+++|+.|++++|++++. ....+++|+.|+|++|+|++. | +..+++|+.|++++|++
T Consensus 173 ~~L~ls~n~l~~l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 173 TTLDCSFNKITELD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp CEEECCSSCCCCCC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCC
T ss_pred CEEECCCCccceec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcC
Confidence 99999999999864 88999999999999999964 356679999999999999984 4 88999999999999999
Q ss_pred CCccchhhhcccc--cCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCC
Q 002158 337 TGSIPATIWQNKS--FSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPI 387 (958)
Q Consensus 337 ~~~ip~~l~~~~~--~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l 387 (958)
++..+..+..+.. +....++.|++++|.+..--....+++|+.|++++|+.
T Consensus 246 ~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~ 298 (457)
T 3bz5_A 246 TELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQ 298 (457)
T ss_dssp SCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTT
T ss_pred CCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcc
Confidence 9754433322211 11223344455554433211223567777888887764
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.2e-28 Score=267.45 Aligned_cols=246 Identities=22% Similarity=0.229 Sum_probs=136.1
Q ss_pred cCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCC-CCCCChhhc-------CCCCCCEEecccccccccCcccc-
Q 002158 107 GQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKL-SGSLPDELG-------YLSNLNRLQVDENNITGTIPKSF- 177 (958)
Q Consensus 107 ~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l-~~~~p~~l~-------~l~~L~~L~L~~N~l~~~~p~~~- 177 (958)
+..++|+.|.+++|.. .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l-~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE-ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEEECTTHHHHCCTT-CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred ccCCCceeEeeccccc-ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 3344445554444433 445444433 55555555555 223444433 45555555555555554444443
Q ss_pred -ccccccceEecccccccccCchhhcCC-----ccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCcccccc
Q 002158 178 -ANLSRVRHLHLNNNSIGGQIPSELSKL-----STLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYG 251 (958)
Q Consensus 178 -~~l~~L~~L~Ls~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~ 251 (958)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+. .|+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~-------------------------~~~ 170 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCE-------------------------QVR 170 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTT-------------------------TCC
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHH-------------------------Hhc
Confidence 4455555555555555533 4444433 4444444444444444444 445
Q ss_pred CCCCCCEEEcccCCCCCC---CCC--CCCCCCcCEEeccCCcCCCc--CCCC--CCCCCcCEEEccCCcCCCccc-hhcc
Q 002158 252 NFSKLVKLSLRNCNLQGA---VPD--LSRIPNLYYLDLSWNHLTGS--IPSK--KLSENVTTIDLSDNYLNGSIL-ESIS 321 (958)
Q Consensus 252 ~l~~L~~L~L~~N~l~~~---~~~--l~~l~~L~~L~Ls~N~l~~~--~~~~--~~~~~L~~L~Ls~N~l~~~~~-~~~~ 321 (958)
++++|++|+|++|++.+. ++. +..+++|++|+|++|++++. ++.. ..+++|++|+|++|+|++..| ..+.
T Consensus 171 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 555555555555554432 111 24555566666666655521 1111 123566666666666666553 4455
Q ss_pred CCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCC
Q 002158 322 NLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICT 389 (958)
Q Consensus 322 ~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~ 389 (958)
.+++|++|+|++|+|+ .+|..++ +.|+.|||++|+|++++....+++|+.|++++|+|+.
T Consensus 251 ~l~~L~~L~Ls~N~l~-~ip~~~~-------~~L~~L~Ls~N~l~~~p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLK-QVPKGLP-------AKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCTTCCEEECTTSCCS-SCCSSCC-------SEEEEEECCSSCCCSCCCTTTSCEEEEEECTTCTTTC
T ss_pred hcCCCCEEECCCCccC-hhhhhcc-------CCceEEECCCCCCCCChhHhhCCCCCEEeccCCCCCC
Confidence 6777888888888887 6777653 4677888888888888664488899999999999853
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=4.2e-27 Score=255.95 Aligned_cols=253 Identities=19% Similarity=0.209 Sum_probs=199.2
Q ss_pred EEEEccCCcCCCCccccccCCCCcceeeccCcccCCCC-ccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccc
Q 002158 89 RELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIP-KEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDEN 167 (958)
Q Consensus 89 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip-~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N 167 (958)
+.++..+++++.. |.. ..++|+.|+++++....++ ..|.++++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~i-p~~--~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVG--IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSC-CTT--CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccC-CcC--CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 4555666666643 333 2468888888876666665 56888999999999999998777888999999999999999
Q ss_pred c-ccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCc
Q 002158 168 N-ITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEI 246 (958)
Q Consensus 168 ~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 246 (958)
. ++...+..|..+++|++|+|++|.+++..|..+.++++|++|++++|++++..+..|..+++|++|+|++|+++. ..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-EC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cC
Confidence 7 776668888899999999999999998778888899999999999999988777788899999999999999862 33
Q ss_pred cccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEccCCcCCCccchhccCCC
Q 002158 247 PATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDNYLNGSILESISNLP 324 (958)
Q Consensus 247 p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 324 (958)
+..+..+++|+.|+|++|++++..+ .+..+++|+.|+|++|++++..+. ...+++|+.|+|++|.+....+.. .-..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 4468889999999999999988866 488899999999999999865443 355689999999999987533221 1123
Q ss_pred CCCeEeeecccCCCccchhhhc
Q 002158 325 FLQTLSLENNFLTGSIPATIWQ 346 (958)
Q Consensus 325 ~L~~L~L~~N~l~~~ip~~l~~ 346 (958)
.|+.+..+.|.+.+..|..+.+
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGTT
T ss_pred HHHhcccccCccccCCchHhCC
Confidence 4566668889998888887643
No 310
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=4.2e-26 Score=250.80 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=217.2
Q ss_pred CCCCCCCCceeeCccccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCcc-ccCCCCCcEEEeeCC
Q 002158 65 DPCMSNWTGVLCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKE-IGNISSLIFLLLNGN 143 (958)
Q Consensus 65 ~~c~~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~-i~~l~~L~~L~Ls~n 143 (958)
+.|.|.|.+|.|.+. +++ .+|..+. ++|+.|++++|....+|.. |.++++|++|+|++|
T Consensus 3 ~~C~C~~~~l~c~~~-----------------~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n 62 (306)
T 2z66_A 3 SRCSCSGTEIRCNSK-----------------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSN 62 (306)
T ss_dssp TTCEEETTEEECCSS-----------------CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred CCCeeCCCEEEcCCC-----------------Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCC
Confidence 568889999999542 222 2333332 5788898888777788765 789999999999999
Q ss_pred CCCC--CCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCc-hhhcCCccchhhhccCCccccC
Q 002158 144 KLSG--SLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIP-SELSKLSTLIHLLVDNNNLSGN 220 (958)
Q Consensus 144 ~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~ 220 (958)
.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|++.+.
T Consensus 63 ~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 63 GLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 141 (306)
T ss_dssp CCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred ccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCcc
Confidence 9983 33677888999999999999998 577789999999999999999996655 5789999999999999999988
Q ss_pred CCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCC-CCC
Q 002158 221 LPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPS-KKL 298 (958)
Q Consensus 221 ~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~-~~~ 298 (958)
.+..+..+++|++|+|++|.++....|..+..+++|+.|+|++|++++.++ .+..+++|+.|+|++|.+++..+. ...
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 899999999999999999999744578899999999999999999999876 489999999999999999865442 355
Q ss_pred CCCcCEEEccCCcCCCccchhccCCC-CCCeEeeecccCCCcc
Q 002158 299 SENVTTIDLSDNYLNGSILESISNLP-FLQTLSLENNFLTGSI 340 (958)
Q Consensus 299 ~~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~i 340 (958)
+++|+.|+|++|++++..+..+..++ +|++|+|++|++++.-
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 68999999999999999999999995 9999999999998643
No 311
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.4e-26 Score=260.11 Aligned_cols=273 Identities=19% Similarity=0.160 Sum_probs=153.4
Q ss_pred CCCCCCCceeeCcc------ccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCC-CccccCCCCCcEE
Q 002158 66 PCMSNWTGVLCFDT------VETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTI-PKEIGNISSLIFL 138 (958)
Q Consensus 66 ~c~~~w~gV~C~~~------~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L 138 (958)
.|.|.|.|+ |... .+.....+++.|+|++|++++..+..+.++++|+.|++++|....+ |..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 455689887 6321 1112223566666666666665555666666666666654443333 4456666666666
Q ss_pred EeeCCCCCCCCChhhcCCCCCCEEecccccccccCc-cccccccccceEecccc-cccccCchhhcCCccchhhhccCCc
Q 002158 139 LLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIP-KSFANLSRVRHLHLNNN-SIGGQIPSELSKLSTLIHLLVDNNN 216 (958)
Q Consensus 139 ~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~L~~N~ 216 (958)
+|++|.+++..+..+.++++|++|+|++|++++..+ ..|.++++|++|++++| .+++..+..+.++++|++|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 666666664333336666666666666666663322 35666666666666666 3554455566666666666666666
Q ss_pred cccCCCcccCCCCCccEEEccCCCCCCCCccc-cccCCCCCCEEEcccCCCCCCCCC----CCCCCCcCEEeccCCcCCC
Q 002158 217 LSGNLPPELSELPQLCILQLDNNNFSASEIPA-TYGNFSKLVKLSLRNCNLQGAVPD----LSRIPNLYYLDLSWNHLTG 291 (958)
Q Consensus 217 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~----l~~l~~L~~L~Ls~N~l~~ 291 (958)
+++..|..+..+++|++|++++|+++ .+|. .+..+++|+.|+|++|++++.... ......++.++|++|.+++
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~--~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~ 263 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHI--LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITD 263 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCST--THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCH
T ss_pred cCccCHHHHhccccCCeecCCCCccc--cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccC
Confidence 66666666666666666666666663 2333 233456666666666666654432 2234455555665555543
Q ss_pred c----CCC-CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccc
Q 002158 292 S----IPS-KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIP 341 (958)
Q Consensus 292 ~----~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip 341 (958)
. +|. ...+++|++|+|++|+|+...+..|..+++|++|+|++|++++..|
T Consensus 264 ~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 264 ESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 1 111 1234555555555555554333334555555555555555554443
No 312
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.6e-24 Score=233.50 Aligned_cols=183 Identities=27% Similarity=0.362 Sum_probs=82.4
Q ss_pred CCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccC
Q 002158 159 LNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDN 238 (958)
Q Consensus 159 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 238 (958)
|++|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 39 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 118 (270)
T 2o6q_A 39 TKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDR 118 (270)
T ss_dssp CSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCS
T ss_pred CCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCC
Confidence 34444444444433333344444444444444444432223333444444444444444433333444444444444444
Q ss_pred CCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccc
Q 002158 239 NNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSIL 317 (958)
Q Consensus 239 N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~ 317 (958)
|+++. ..+..|.++++|+.|+|++|++++.++. +..+++|+.|+|++|.++ +..+
T Consensus 119 n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-----------------------~~~~ 174 (270)
T 2o6q_A 119 NQLKS-LPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-----------------------RVPE 174 (270)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-----------------------CCCT
T ss_pred CccCe-eCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc-----------------------EeCh
Confidence 44431 1223334444444444444444443332 344444444444444443 3334
Q ss_pred hhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCCCC
Q 002158 318 ESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTSAN 392 (958)
Q Consensus 318 ~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~~~ 392 (958)
..|..+++|++|+|++|+|++ +|...+. .+++|+.|+|++|||.|+|.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~-~~~~~~~--------------------------~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKR-VPEGAFD--------------------------SLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSC-CCTTTTT--------------------------TCTTCCEEECCSSCBCCSSS
T ss_pred hHhccCCCcCEEECCCCcCCc-CCHHHhc--------------------------cccCCCEEEecCCCeeCCCc
Confidence 445555555555555555552 2222110 34566777777777777764
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=5.3e-25 Score=254.90 Aligned_cols=233 Identities=21% Similarity=0.235 Sum_probs=199.1
Q ss_pred CccccccCCCCcceeeccCcccCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCcccccc
Q 002158 101 NLAPELGQLSRLQYYFMWNDLTGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFAN 179 (958)
Q Consensus 101 ~~~~~l~~L~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 179 (958)
.+|..+. ++++.|++++|....+ +..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+++...+..|..
T Consensus 57 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 134 (440)
T 3zyj_A 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVY 134 (440)
T ss_dssp SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCS
T ss_pred cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhc
Confidence 3444443 6788888876655554 467899999999999999999777788999999999999999999777778999
Q ss_pred ccccceEecccccccccCchhhcCCccchhhhccC-CccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCE
Q 002158 180 LSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDN-NNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVK 258 (958)
Q Consensus 180 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~ 258 (958)
+++|++|+|++|.|+...+..|.++++|+.|+|++ |.+....+..|.++++|++|+|++|+++ .+| .+..+++|+.
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~--~~~-~~~~l~~L~~ 211 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR--EIP-NLTPLIKLDE 211 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS--SCC-CCTTCSSCCE
T ss_pred cccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc--ccc-ccCCCcccCE
Confidence 99999999999999977777899999999999998 4555555668999999999999999996 445 4788999999
Q ss_pred EEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccC
Q 002158 259 LSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFL 336 (958)
Q Consensus 259 L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 336 (958)
|+|++|++++..+. |..+++|+.|+|++|++++..+.. ..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++
T Consensus 212 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 212 LDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred EECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 99999999998774 999999999999999999665543 4568999999999999999999999999999999999998
Q ss_pred CC
Q 002158 337 TG 338 (958)
Q Consensus 337 ~~ 338 (958)
..
T Consensus 292 ~C 293 (440)
T 3zyj_A 292 NC 293 (440)
T ss_dssp EC
T ss_pred cC
Confidence 63
No 314
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.5e-25 Score=240.73 Aligned_cols=218 Identities=23% Similarity=0.204 Sum_probs=190.1
Q ss_pred cCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhh
Q 002158 122 TGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSEL 201 (958)
Q Consensus 122 ~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 201 (958)
...+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|
T Consensus 19 l~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 96 (276)
T 2z62_A 19 FYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAF 96 (276)
T ss_dssp CSSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTT
T ss_pred ccccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhh
Confidence 345565543 479999999999997777789999999999999999997777889999999999999999998888889
Q ss_pred cCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcC
Q 002158 202 SKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLY 280 (958)
Q Consensus 202 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~ 280 (958)
.++++|++|++++|++++..+..+..+++|++|+|++|+++...+|..+.++++|+.|+|++|++++.++. +..+++|+
T Consensus 97 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 97 SGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp TTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred cCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 99999999999999999887778999999999999999998656789999999999999999999987763 55555555
Q ss_pred ----EEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccc
Q 002158 281 ----YLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIP 341 (958)
Q Consensus 281 ----~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip 341 (958)
.|++++|.+++..+......+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 177 ~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 177 LLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp TCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 8999999999766666666799999999999999888889999999999999999997554
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=3.3e-26 Score=267.74 Aligned_cols=197 Identities=25% Similarity=0.206 Sum_probs=138.4
Q ss_pred CCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhc
Q 002158 133 SSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLV 212 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 212 (958)
++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|+.|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 378888888888887777788888888888888888876555 7788888888888888874322 267778888
Q ss_pred cCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CC-CCCCcCEEeccCCcCC
Q 002158 213 DNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LS-RIPNLYYLDLSWNHLT 290 (958)
Q Consensus 213 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~-~l~~L~~L~Ls~N~l~ 290 (958)
++|+|++..+. .+++|+.|+|++|.++ ...|..++++++|+.|+|++|.+++.++. +. .+++|+.|+|++|.|+
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCC-SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCC-CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 88887765443 3467777777777776 34456677777777777777777775553 43 5777777777777777
Q ss_pred CcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchh
Q 002158 291 GSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPAT 343 (958)
Q Consensus 291 ~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~ 343 (958)
+. +....+++|+.|+|++|.|++..+. |..+++|+.|+|++|.|++ +|..
T Consensus 183 ~~-~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~ 232 (487)
T 3oja_A 183 DV-KGQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKA 232 (487)
T ss_dssp EE-ECCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTT
T ss_pred cc-cccccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchh
Confidence 43 4444566777777777777754443 6666777777777777663 4444
No 316
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=4.1e-26 Score=269.14 Aligned_cols=194 Identities=14% Similarity=0.186 Sum_probs=146.8
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChh--------cHHHHHHHHHHHHccCCCCcceEEEEEEeCCeE
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQ--------GQNEFLTEIKLLSRLHHRNLVSLLGYCDEEGEQ 696 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 696 (958)
..+...+.||+|+||+||+|.+ .++.+++|+....... ..++|.+|++++++++||||+++..++...+..
T Consensus 336 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 414 (540)
T 3en9_A 336 KRKIPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNK 414 (540)
T ss_dssp ------------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTT
T ss_pred ccCCCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCcc
Confidence 3334567899999999999954 6788999986442211 134589999999999999999666666677788
Q ss_pred EEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 697 MLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 697 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
++||||+++++|.++++. +..++.|+++||+|||+++ |+||||||+|||++. .+||+|||+++..
T Consensus 415 ~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 415 RIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999999999965 4689999999999999999 999999999999998 9999999999875
Q ss_pred ccCCCCCCccceeeeeccCCCCccChhhhcc--CCCCCcchhhhHHHHHHHHHhCCCCCC
Q 002158 777 PVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVLLELLTGMQPIS 834 (958)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~S~Gv~l~elltG~~P~~ 834 (958)
..................||+.|||||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3211100000001235679999999999987 567888999999999999888887763
No 317
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6.5e-25 Score=237.44 Aligned_cols=221 Identities=19% Similarity=0.199 Sum_probs=138.7
Q ss_pred EEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCc
Q 002158 137 FLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNN 216 (958)
Q Consensus 137 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 216 (958)
.++..+..++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4566666666 5665543 467777777777776555567777777777777777765555566666666666666666
Q ss_pred cccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCc-CC
Q 002158 217 LSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGS-IP 294 (958)
Q Consensus 217 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~-~~ 294 (958)
+++..+..|.++++|++|++++|+++ +..+ .+..+++|++|+|++|.+++. +|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~l~ 142 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLA-------------------------SLENFPIGHLKTLKELNVAHNLIQSFKLP 142 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCC-------------------------CSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred cCccChhhhcCCccccEEECCCCCcc-------------------------ccCchhcccCCCCCEEECcCCccceecCc
Confidence 66555555666666666666665554 3333 244445555555555555431 22
Q ss_pred C-CCCCCCcCEEEccCCcCCCccchhccCCCCCC----eEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCc
Q 002158 295 S-KKLSENVTTIDLSDNYLNGSILESISNLPFLQ----TLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIV 369 (958)
Q Consensus 295 ~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~ 369 (958)
. ...+++|++|+|++|++++..+..|..+++|+ .|++++|+++ .+|...+.. ..++.|+|++|+++.++
T Consensus 143 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~-~~~~~~~~~-----~~L~~L~L~~n~l~~~~ 216 (276)
T 2z62_A 143 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKE-----IRLKELALDTNQLKSVP 216 (276)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCC-EECTTSSCS-----CCEEEEECCSSCCSCCC
T ss_pred hhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCccc-ccCccccCC-----CcccEEECCCCceeecC
Confidence 2 23345566666666666655566666555555 7788888887 444444332 25678888888888887
Q ss_pred cCC--CCCCcceEEeCCCCCCCCC
Q 002158 370 GDL--TLPNNVTLRLGGNPICTSA 391 (958)
Q Consensus 370 ~~~--~l~~L~~L~l~~N~l~~~~ 391 (958)
... .+++|+.|+|++|||.|+|
T Consensus 217 ~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 217 DGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp TTTTTTCCSCCEEECCSSCBCCCT
T ss_pred HhHhcccccccEEEccCCcccccC
Confidence 654 7899999999999985544
No 318
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.2e-24 Score=236.65 Aligned_cols=204 Identities=22% Similarity=0.242 Sum_probs=125.6
Q ss_pred ccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccch
Q 002158 129 IGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLI 208 (958)
Q Consensus 129 i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 208 (958)
++++++|+++++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------- 69 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK------------- 69 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-------------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-------------
Confidence 455666666666666666 4554443 455666666666655555555555555555555555552
Q ss_pred hhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCC
Q 002158 209 HLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWN 287 (958)
Q Consensus 209 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N 287 (958)
..+ ...+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++.++. |..+++|++|+|++|
T Consensus 70 -----------~~~--~~~l~~L~~L~Ls~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 70 -----------LQV--DGTLPVLGTLDLSHNQLQ--SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp -----------EEC--CSCCTTCCEEECCSSCCS--SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred -----------ccC--CCCCCcCCEEECCCCcCC--cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 211 134556666666666664 4555566666666666666666666653 666777777777777
Q ss_pred cCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCC
Q 002158 288 HLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFS 366 (958)
Q Consensus 288 ~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~ 366 (958)
++++..+.. ..+++|+.|+|++|+|+...+..|..+++|+.|+|++|+|+ .+|..++.
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~-------------------- 193 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFG-------------------- 193 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTT--------------------
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcc--------------------
Confidence 776443332 33466777777777777666677777888888888888887 56665533
Q ss_pred CCccCCCCCCcceEEeCCCCCCCCC
Q 002158 367 NIVGDLTLPNNVTLRLGGNPICTSA 391 (958)
Q Consensus 367 ~l~~~~~l~~L~~L~l~~N~l~~~~ 391 (958)
.++|+.|+|.+|||.|+|
T Consensus 194 -------~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 194 -------SHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp -------TCCCSEEECCSCCBCCSG
T ss_pred -------cccCCeEEeCCCCccCcC
Confidence 345677777777774433
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=1.2e-25 Score=248.34 Aligned_cols=237 Identities=23% Similarity=0.196 Sum_probs=134.4
Q ss_pred cCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchh
Q 002158 130 GNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIH 209 (958)
Q Consensus 130 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 209 (958)
..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+ +..+++|++|+|++|.+++.. ..++|++
T Consensus 31 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~ 103 (317)
T 3o53_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (317)
T ss_dssp TTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred ccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCE
Confidence 344556666666666665555556666666666666666654433 556666666666666665321 2256666
Q ss_pred hhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-C-CCCCCcCEEeccCC
Q 002158 210 LLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-L-SRIPNLYYLDLSWN 287 (958)
Q Consensus 210 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l-~~l~~L~~L~Ls~N 287 (958)
|++++|++++..+.. +++|++|++++|+++. ..+..+..+++|+.|+|++|++++..+. + ..+++|++|+|++|
T Consensus 104 L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 179 (317)
T 3o53_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITM-LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (317)
T ss_dssp EECCSSCCSEEEECC---CSSCEEEECCSSCCCS-GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EECCCCccCCcCccc---cCCCCEEECCCCCCCC-ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCC
Confidence 666666665443322 3556666666666652 2344555666666666666666655442 3 34566666666666
Q ss_pred cCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCC-
Q 002158 288 HLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFS- 366 (958)
Q Consensus 288 ~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~- 366 (958)
.+++ ++....+++|++|+|++|+|++..+. +..+++|+.|+|++|+|+ .+|..+..+ +.++.|+|++|.++
T Consensus 180 ~l~~-~~~~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l-----~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 180 FIYD-VKGQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFS-----QNLEHFDLRGNGFHC 251 (317)
T ss_dssp CCCE-EECCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCC-----TTCCEEECTTCCCBH
T ss_pred cCcc-cccccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcC-----CCCCEEEccCCCccC
Confidence 6653 23344456666666666666644333 666666666666666666 455544322 34456666666666
Q ss_pred C-CccCC-CCCCcceEEeCCC
Q 002158 367 N-IVGDL-TLPNNVTLRLGGN 385 (958)
Q Consensus 367 ~-l~~~~-~l~~L~~L~l~~N 385 (958)
. ++... .+++|+.|++.+|
T Consensus 252 ~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 252 GTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp HHHHHHHHTCHHHHHHHHHHH
T ss_pred cCHHHHHhccccceEEECCCc
Confidence 2 22222 5667777777644
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=6.1e-26 Score=250.69 Aligned_cols=258 Identities=20% Similarity=0.150 Sum_probs=210.6
Q ss_pred eeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCC-ccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecc
Q 002158 87 HVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIP-KEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVD 165 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip-~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 165 (958)
....++++.+++...+...+..+++|+.|++++|....++ ..|.++++|++|+|++|.+++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 4556677777776666666677889999999876665554 679999999999999999986554 8999999999999
Q ss_pred cccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCC
Q 002158 166 ENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASE 245 (958)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 245 (958)
+|++++. ...++|++|++++|++++..+. .+++|+.|++++|++++..+..+..+++|++|+|++|.++..
T Consensus 89 ~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 159 (317)
T 3o53_A 89 NNYVQEL-----LVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV- 159 (317)
T ss_dssp SSEEEEE-----EECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE-
T ss_pred CCccccc-----cCCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc-
Confidence 9999843 2448999999999999966544 367899999999999988888899999999999999999743
Q ss_pred ccccc-cCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCC
Q 002158 246 IPATY-GNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLP 324 (958)
Q Consensus 246 ~p~~~-~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 324 (958)
.+..+ ..+++|+.|+|++|++++.+ ....+++|++|+|++|++++..+....+++|+.|+|++|+|+. +|..+..++
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~ 237 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred cHHHHhhccCcCCEEECCCCcCcccc-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccc-hhhHhhcCC
Confidence 34444 57899999999999998774 4445899999999999999766666667999999999999994 677899999
Q ss_pred CCCeEeeecccCC-CccchhhhcccccCccccceEeccC
Q 002158 325 FLQTLSLENNFLT-GSIPATIWQNKSFSTKARLKIDLRN 362 (958)
Q Consensus 325 ~L~~L~L~~N~l~-~~ip~~l~~~~~~~~~~l~~L~Ls~ 362 (958)
+|+.|+|++|+++ +.+|..+..+ +.++.|++++
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~-----~~L~~l~l~~ 271 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKN-----QRVQTVAKQT 271 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTC-----HHHHHHHHHH
T ss_pred CCCEEEccCCCccCcCHHHHHhcc-----ccceEEECCC
Confidence 9999999999998 6777776554 3455777773
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=3.2e-25 Score=259.31 Aligned_cols=234 Identities=21% Similarity=0.167 Sum_probs=182.5
Q ss_pred CCcceeeccCcccCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEec
Q 002158 110 SRLQYYFMWNDLTGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHL 188 (958)
Q Consensus 110 ~~L~~L~l~n~~~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 188 (958)
++|+.|++++|....+ |..|.++++|++|+|++|.+++..| +..+++|++|+|++|.|++.. ..++|+.|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC
Confidence 3788888876555444 4678888888999999888886555 888888999999999888433 2378889999
Q ss_pred ccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCcccccc-CCCCCCEEEcccCCCC
Q 002158 189 NNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYG-NFSKLVKLSLRNCNLQ 267 (958)
Q Consensus 189 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~-~l~~L~~L~L~~N~l~ 267 (958)
++|.|++..+. .+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++ ..|..+. .+++|+.|+|++|.|+
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-VNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE-EEGGGGGGGTTTCCEEECTTSCCC
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC-cChHHHhhhCCcccEEecCCCccc
Confidence 99988865553 45788889999999988888888888999999999998874 3455554 7889999999999988
Q ss_pred CCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCC-Cccchhhhc
Q 002158 268 GAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLT-GSIPATIWQ 346 (958)
Q Consensus 268 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~ip~~l~~ 346 (958)
+.+ .+..+++|+.|+|++|.+++.++....+++|+.|+|++|.|++ +|..+..+++|+.|+|++|++. +.+|..+..
T Consensus 183 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 183 DVK-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EEE-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred ccc-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 774 3446889999999999998776766667899999999999985 5667888899999999999987 566666654
Q ss_pred ccccCccccceEecc
Q 002158 347 NKSFSTKARLKIDLR 361 (958)
Q Consensus 347 ~~~~~~~~l~~L~Ls 361 (958)
+. .+..|+++
T Consensus 261 l~-----~L~~l~~~ 270 (487)
T 3oja_A 261 NQ-----RVQTVAKQ 270 (487)
T ss_dssp CH-----HHHHHHHH
T ss_pred CC-----CCcEEecc
Confidence 33 33455554
No 322
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=7.2e-27 Score=272.41 Aligned_cols=302 Identities=18% Similarity=0.155 Sum_probs=196.6
Q ss_pred eeEEEEccCCcCCCCcccccc-CCC----CcceeeccCcccC-----CCCccccCCCCCcEEEeeCCCCCCCCChhhc--
Q 002158 87 HVRELQLLSMNLSGNLAPELG-QLS----RLQYYFMWNDLTG-----TIPKEIGNISSLIFLLLNGNKLSGSLPDELG-- 154 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~-~L~----~L~~L~l~n~~~~-----~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~-- 154 (958)
+++.|+|++|.+.+..+..+. .++ +|++|++++|..+ .+|..+.++++|++|+|++|.+++..+..+.
T Consensus 57 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~ 136 (461)
T 1z7x_W 57 ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG 136 (461)
T ss_dssp TCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH
T ss_pred CcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH
Confidence 577777777777664443332 344 5777777765544 4566777777777777777777643333332
Q ss_pred ---CCCCCCEEeccccccccc----CccccccccccceEecccccccccCchhhc-----CCccchhhhccCCccccC--
Q 002158 155 ---YLSNLNRLQVDENNITGT----IPKSFANLSRVRHLHLNNNSIGGQIPSELS-----KLSTLIHLLVDNNNLSGN-- 220 (958)
Q Consensus 155 ---~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~-- 220 (958)
.+++|++|+|++|++++. ++..+..+++|++|+|++|.+++..+..+. .+++|++|++++|++++.
T Consensus 137 l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 216 (461)
T 1z7x_W 137 LLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC 216 (461)
T ss_dssp HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHH
T ss_pred HhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHH
Confidence 245677777777777753 345556667788888888777654443332 255777888888877753
Q ss_pred --CCcccCCCCCccEEEccCCCCCCCCc----cccccCCCCCCEEEcccCCCCCC-----CCCCCCCCCcCEEeccCCcC
Q 002158 221 --LPPELSELPQLCILQLDNNNFSASEI----PATYGNFSKLVKLSLRNCNLQGA-----VPDLSRIPNLYYLDLSWNHL 289 (958)
Q Consensus 221 --~~~~l~~l~~L~~L~L~~N~l~~~~~----p~~~~~l~~L~~L~L~~N~l~~~-----~~~l~~l~~L~~L~Ls~N~l 289 (958)
++..+..+++|++|+|++|.++.... +..+..+++|++|+|++|+++.. +..+..+++|++|+|++|.+
T Consensus 217 ~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 296 (461)
T 1z7x_W 217 RDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296 (461)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCC
T ss_pred HHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCC
Confidence 35566677888888888887753111 22334577788888888877763 22355677888888888877
Q ss_pred CCcCCCC------CCCCCcCEEEccCCcCCCc----cchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEe
Q 002158 290 TGSIPSK------KLSENVTTIDLSDNYLNGS----ILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKID 359 (958)
Q Consensus 290 ~~~~~~~------~~~~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~ 359 (958)
++..+.. ...++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.....-..+.++.|+
T Consensus 297 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~ 376 (461)
T 1z7x_W 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLW 376 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred chHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEE
Confidence 5321111 1125788888888888765 45666677888888888888876666655543222245677888
Q ss_pred ccCCCCCC-----CccCC-CCCCcceEEeCCCCCC
Q 002158 360 LRNNSFSN-----IVGDL-TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 360 Ls~N~l~~-----l~~~~-~l~~L~~L~l~~N~l~ 388 (958)
|++|++++ ++... .+++|+.|++++|++.
T Consensus 377 L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 377 LADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 88888873 44433 6788888888888874
No 323
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.90 E-value=2.2e-22 Score=240.19 Aligned_cols=259 Identities=22% Similarity=0.242 Sum_probs=214.3
Q ss_pred CCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecc
Q 002158 110 SRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLN 189 (958)
Q Consensus 110 ~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 189 (958)
.+++.|+++++....+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 40 ~~l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 40 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp HCCCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCCcEEEecCCCcCccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 458899999888889998876 89999999999999 6776 5799999999999999 4665 67999999999
Q ss_pred cccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCC
Q 002158 190 NNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGA 269 (958)
Q Consensus 190 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~ 269 (958)
+|+|++ +|. .+++|+.|++++|+|++ +|.. +++|++|+|++|+++. +|. .+.+|+.|++++|+++++
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~--l~~---~~~~L~~L~L~~N~l~~l 176 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS--LPA---LPSELCKLWAYNNQLTSL 176 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSCC
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC--cCC---ccCCCCEEECCCCCCCCC
Confidence 999995 554 67899999999999996 4443 4899999999999973 454 357899999999999987
Q ss_pred CCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccc
Q 002158 270 VPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKS 349 (958)
Q Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~ 349 (958)
+ ..+++|+.|+|++|.+++ +|. .+++|+.|++++|.|+... . .+++|+.|+|++|.|++ +|..
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~-l~~--~~~~L~~L~L~~N~l~~l~-~---~~~~L~~L~Ls~N~L~~-lp~~------ 239 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS-LPT--LPSELYKLWAYNNRLTSLP-A---LPSGLKELIVSGNRLTS-LPVL------ 239 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSSCC-C---CCTTCCEEECCSSCCSC-CCCC------
T ss_pred c---ccCCCCcEEECCCCCCCC-CCC--ccchhhEEECcCCcccccC-C---CCCCCCEEEccCCccCc-CCCC------
Confidence 6 557899999999999995 443 3589999999999998544 2 35899999999999995 6622
Q ss_pred cCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCC
Q 002158 350 FSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNC 417 (958)
Q Consensus 350 ~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C 417 (958)
.+.|+.|+|++|+|+.++. .+++|+.|+|++|.+... + ..+........+.|.+|++..
T Consensus 240 --l~~L~~L~Ls~N~L~~lp~--~~~~L~~L~Ls~N~L~~l---p--~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 240 --PSELKELMVSGNRLTSLPM--LPSGLLSLSVYRNQLTRL---P--ESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp --CTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCCSC---C--GGGGGSCTTCEEECCSCCCCH
T ss_pred --CCcCcEEECCCCCCCcCCc--ccccCcEEeCCCCCCCcC---C--HHHhhccccCEEEecCCCCCC
Confidence 2578899999999999988 789999999999999732 2 224445666778889988753
No 324
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=3.5e-26 Score=266.61 Aligned_cols=302 Identities=19% Similarity=0.161 Sum_probs=223.1
Q ss_pred eeeEEEEccCCcCCCCcccc-ccCCCCcceeeccCcccC-----CCCccccCCCCCcEEEeeCCCCCCCCChhhc-CCC-
Q 002158 86 LHVRELQLLSMNLSGNLAPE-LGQLSRLQYYFMWNDLTG-----TIPKEIGNISSLIFLLLNGNKLSGSLPDELG-YLS- 157 (958)
Q Consensus 86 ~~v~~L~L~~~~l~~~~~~~-l~~L~~L~~L~l~n~~~~-----~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~- 157 (958)
.+++.|+|++++++...... +..+++|+.|+++++..+ .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 47889999988887765444 777889999988876655 4577788889999999999988754444443 355
Q ss_pred ---CCCEEecccccccc----cCccccccccccceEecccccccccCchhhc-----CCccchhhhccCCccccCC----
Q 002158 158 ---NLNRLQVDENNITG----TIPKSFANLSRVRHLHLNNNSIGGQIPSELS-----KLSTLIHLLVDNNNLSGNL---- 221 (958)
Q Consensus 158 ---~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~~---- 221 (958)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 69999999999884 5678888899999999999998754444332 3567999999999888643
Q ss_pred CcccCCCCCccEEEccCCCCCCCCcccccc-----CCCCCCEEEcccCCCCCCC----C-CCCCCCCcCEEeccCCcCCC
Q 002158 222 PPELSELPQLCILQLDNNNFSASEIPATYG-----NFSKLVKLSLRNCNLQGAV----P-DLSRIPNLYYLDLSWNHLTG 291 (958)
Q Consensus 222 ~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~-----~l~~L~~L~L~~N~l~~~~----~-~l~~l~~L~~L~Ls~N~l~~ 291 (958)
+..+..+++|++|+|++|.++. ..+..+. ..++|+.|+|++|.+++.. + .+..+++|+.|+|++|.+++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~-~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINE-AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHH-HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHhhCCCCCEEECcCCCcch-HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 5566677899999999998863 2122222 3568999999999888642 2 36678889999999998864
Q ss_pred cC-----CCC-CCCCCcCEEEccCCcCCCc----cchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEecc
Q 002158 292 SI-----PSK-KLSENVTTIDLSDNYLNGS----ILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLR 361 (958)
Q Consensus 292 ~~-----~~~-~~~~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls 361 (958)
.. +.. ..+++|++|+|++|.++.. ++..+..+++|++|+|++|.+++..+..+.....-..+.++.|+|+
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 21 111 2357899999999998875 5667777899999999999987666666655433334578889999
Q ss_pred CCCCCCCc-----cCC-CCCCcceEEeCCCCCC
Q 002158 362 NNSFSNIV-----GDL-TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 362 ~N~l~~l~-----~~~-~l~~L~~L~l~~N~l~ 388 (958)
+|.++... ... .+++|+.|++++|++.
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccc
Confidence 99888642 222 5688899999998874
No 325
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.5e-23 Score=228.99 Aligned_cols=200 Identities=20% Similarity=0.199 Sum_probs=121.5
Q ss_pred CCCCcEEEeeCCCCCCCCChhh--cCCCCCCEEecccccccccCc----cccccccccceEecccccccccCchhhcCCc
Q 002158 132 ISSLIFLLLNGNKLSGSLPDEL--GYLSNLNRLQVDENNITGTIP----KSFANLSRVRHLHLNNNSIGGQIPSELSKLS 205 (958)
Q Consensus 132 l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 205 (958)
+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+++..+..+..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3457777777777766666666 666677777777777665433 2334566777777777777666666666677
Q ss_pred cchhhhccCCccccC----CCcccCCCCCccEEEccCCCCCCCCccc----cccCCCCCCEEEcccCCCCCCCC-CCCCC
Q 002158 206 TLIHLLVDNNNLSGN----LPPELSELPQLCILQLDNNNFSASEIPA----TYGNFSKLVKLSLRNCNLQGAVP-DLSRI 276 (958)
Q Consensus 206 ~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~p~----~~~~l~~L~~L~L~~N~l~~~~~-~l~~l 276 (958)
+|++|+|++|++.+. .+..+..+++|++|+|++|+++ .++. .+.++++|++|+|++|++++..| .+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~--~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME--TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC--CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC--chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 777777777765531 1223356666777777777664 2232 24566667777777777766633 34333
Q ss_pred ---CCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCC
Q 002158 277 ---PNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLT 337 (958)
Q Consensus 277 ---~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 337 (958)
++|++|+|++|+|+ .+|.... ++|++|+|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~-~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP-AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC-SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc-CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 56666777766666 4443332 5666666666666654 22 455666666666666665
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=1.8e-23 Score=225.51 Aligned_cols=209 Identities=21% Similarity=0.245 Sum_probs=158.7
Q ss_pred ccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccch
Q 002158 129 IGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLI 208 (958)
Q Consensus 129 i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 208 (958)
+..+++|+.|++++|.++ .++ .+..+++|++|+|++|++++. ..+..+++|++|+|++|.+++..+..+.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 456677777777777776 333 477777888888888877752 3677777888888888888766666677788888
Q ss_pred hhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCC
Q 002158 209 HLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWN 287 (958)
Q Consensus 209 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N 287 (958)
+|+|++|++++..+..|..+++|++|+|++|+++ ...+..+..+++|+.|+|++|++++.++. +..+++|+.|+|++|
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccC-ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 8888888887777777788888888888888876 33345567788888888888888877765 677888888888888
Q ss_pred cCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccc
Q 002158 288 HLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKS 349 (958)
Q Consensus 288 ~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~ 349 (958)
++++..+.. ..+++|+.|+|++|.+.+ .+++|+.|+++.|.++|.+|.++..+..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccCC
Confidence 888655543 456888888888888763 4667999999999999999998877655
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=7.2e-23 Score=220.81 Aligned_cols=209 Identities=21% Similarity=0.269 Sum_probs=114.4
Q ss_pred ccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccce
Q 002158 106 LGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRH 185 (958)
Q Consensus 106 l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 185 (958)
+..+++|+.|.++++....++ .+..+++|++|+|++|.+++ + ..+..+++|++|+|++|++++..+..|.++++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred cccccceeeeeeCCCCccccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 344555555555555444443 35555556666666655553 2 24555555666666666555554545555556666
Q ss_pred EecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCC
Q 002158 186 LHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCN 265 (958)
Q Consensus 186 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~ 265 (958)
|+|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ ...+..+.++++|+.|+|++|+
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC-ccCHHHhcCCccCCEEECCCCc
Confidence 666666655544445555555666666666555555555555556666666666554 2223345555556666666665
Q ss_pred CCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCC
Q 002158 266 LQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLP 324 (958)
Q Consensus 266 l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 324 (958)
+++.++. +..+++|+.|+|++|.+.+.. ++|+.|+++.|.++|.+|..++.++
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~------~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCTC------PGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCT------TTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred CCccCHHHHhCCcCCCEEEccCCCccccC------cHHHHHHHHHHhCCCcccCcccccC
Confidence 5555543 455555666666665554332 2455555555555555555555443
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.1e-22 Score=219.00 Aligned_cols=203 Identities=24% Similarity=0.172 Sum_probs=154.9
Q ss_pred cccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccc
Q 002158 105 ELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVR 184 (958)
Q Consensus 105 ~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 184 (958)
.++++++|+.++++++....+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|++++..+ ...+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred cccccCCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 36678888888888888888888775 689999999999998888899999999999999999995433 37889999
Q ss_pred eEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccC
Q 002158 185 HLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNC 264 (958)
Q Consensus 185 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N 264 (958)
+|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|+++. ..+..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc-cChhhcccccCCCEEECCCC
Confidence 9999999998 677778888888888888888887777778888888888888888762 33445667777777777777
Q ss_pred CCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCC
Q 002158 265 NLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLT 337 (958)
Q Consensus 265 ~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 337 (958)
+|++.++. +..+++|+.|+|++|+|+. +|..+..+++|+.|+|++|++.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~------------------------ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYT------------------------IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCC------------------------CCTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCc------------------------cChhhcccccCCeEEeCCCCcc
Confidence 77766654 5666666666666666662 3333444556666666666665
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=8.2e-22 Score=212.28 Aligned_cols=214 Identities=22% Similarity=0.278 Sum_probs=151.2
Q ss_pred CCCCceeeCccccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCC
Q 002158 69 SNWTGVLCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGS 148 (958)
Q Consensus 69 ~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~ 148 (958)
|.|.|+.|... ...+.+++++++++. +|..+. ++|++|+|++|.+++.
T Consensus 5 C~~~~~~C~c~------~~~~~l~~~~~~l~~------------------------ip~~~~--~~l~~L~l~~n~l~~~ 52 (270)
T 2o6q_A 5 CKKDGGVCSCN------NNKNSVDCSSKKLTA------------------------IPSNIP--ADTKKLDLQSNKLSSL 52 (270)
T ss_dssp BGGGTCSBEEE------TTTTEEECTTSCCSS------------------------CCSCCC--TTCSEEECCSSCCSCC
T ss_pred CCCCCCCCEeC------CCCCEEEccCCCCCc------------------------cCCCCC--CCCCEEECcCCCCCee
Confidence 47999999532 124566666666553 333332 4677778888877765
Q ss_pred CChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCC
Q 002158 149 LPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSEL 228 (958)
Q Consensus 149 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l 228 (958)
.+..|.++++|++|+|++|+++...+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+
T Consensus 53 ~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 132 (270)
T 2o6q_A 53 PSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSL 132 (270)
T ss_dssp CTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTC
T ss_pred CHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcC
Confidence 55677778888888888888775555566777888888888888876666677778888888888888887777778888
Q ss_pred CCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEc
Q 002158 229 PQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDL 307 (958)
Q Consensus 229 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L 307 (958)
++|++|+|++|+++. ..+..|..+++|+.|+|++|++++.++. |..+++|+.|+|++|++++
T Consensus 133 ~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------------- 195 (270)
T 2o6q_A 133 TKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR---------------- 195 (270)
T ss_dssp TTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC----------------
T ss_pred cCCCEEECCCCcCCc-cCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc----------------
Confidence 888888888888863 3344578888888888888888877764 6777777777777777663
Q ss_pred cCCcCCCccchhccCCCCCCeEeeecccCCC
Q 002158 308 SDNYLNGSILESISNLPFLQTLSLENNFLTG 338 (958)
Q Consensus 308 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 338 (958)
..+..|..+++|+.|+|++|++..
T Consensus 196 -------~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 196 -------VPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp -------CCTTTTTTCTTCCEEECCSSCBCC
T ss_pred -------CCHHHhccccCCCEEEecCCCeeC
Confidence 223345556666666666666653
No 330
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=9.9e-23 Score=220.24 Aligned_cols=153 Identities=13% Similarity=0.075 Sum_probs=122.3
Q ss_pred HHHHHHHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCCh------------------hcHHHHHHHHHHHHccC
Q 002158 618 KELAMATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSL------------------QGQNEFLTEIKLLSRLH 679 (958)
Q Consensus 618 ~el~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 679 (958)
..+......|...+.||+|+||.||+|.+.+|+.||||+++.... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344444555667799999999999999997799999999864321 13456899999999999
Q ss_pred CCCcceEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEe
Q 002158 680 HRNLVSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILL 759 (958)
Q Consensus 680 H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl 759 (958)
| +++.+++.. +..++||||+++++|.+ +.. .....++.|+++||+|||+.+ |+||||||+|||+
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl 226 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLV 226 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEE
Confidence 4 666665544 45699999999999998 532 123479999999999999999 9999999999999
Q ss_pred cCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhcc
Q 002158 760 DSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLT 807 (958)
Q Consensus 760 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 807 (958)
+ ++.+||+|||+|+. +..|+|||++..
T Consensus 227 ~-~~~vkl~DFG~a~~--------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE--------------------VGEEGWREILER 253 (282)
T ss_dssp E-TTEEEECCCTTCEE--------------------TTSTTHHHHHHH
T ss_pred E-CCcEEEEECCCCeE--------------------CCCCCHHHHHHH
Confidence 9 99999999999863 345789998853
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=1.6e-22 Score=222.46 Aligned_cols=222 Identities=21% Similarity=0.209 Sum_probs=137.2
Q ss_pred CCcEEEeeCCCCCCCCCh---hhcCCCCCCEEecccccccccCcccc--ccccccceEecccccccccCc----hhhcCC
Q 002158 134 SLIFLLLNGNKLSGSLPD---ELGYLSNLNRLQVDENNITGTIPKSF--ANLSRVRHLHLNNNSIGGQIP----SELSKL 204 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~---~l~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~l~~l 204 (958)
.++.|.+.++.++...-. .+..+++|++|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 466677776666421000 12234557777777777666666666 666666666666666665433 223345
Q ss_pred ccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCC---CCCC--CCCCCCc
Q 002158 205 STLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQG---AVPD--LSRIPNL 279 (958)
Q Consensus 205 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~---~~~~--l~~l~~L 279 (958)
++|++|+|++|++.+..+..|..+++|++|+|++|++ .+ .+.. +..+++|
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l-------------------------~~~~~~~~~~~~~~l~~L 199 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPG-------------------------LGERGLMAALCPHKFPAI 199 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTT-------------------------CHHHHHHTTSCTTSSCCC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCC-------------------------ccchhhhHHHhhhcCCCC
Confidence 5555555555555544445555555555555555544 33 1111 3455666
Q ss_pred CEEeccCCcCCCcCCC-----CCCCCCcCEEEccCCcCCCccchhccCC---CCCCeEeeecccCCCccchhhhcccccC
Q 002158 280 YYLDLSWNHLTGSIPS-----KKLSENVTTIDLSDNYLNGSILESISNL---PFLQTLSLENNFLTGSIPATIWQNKSFS 351 (958)
Q Consensus 280 ~~L~Ls~N~l~~~~~~-----~~~~~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~ip~~l~~~~~~~ 351 (958)
++|+|++|+++. ++. ...+++|++|+|++|+|++..|..+..+ ++|++|+|++|+|+ .+|..++
T Consensus 200 ~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~------ 271 (310)
T 4glp_A 200 QNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP------ 271 (310)
T ss_dssp CSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC------
T ss_pred CEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc------
Confidence 666666666652 222 1234677777777777776666666655 68888888888888 6777653
Q ss_pred ccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCC
Q 002158 352 TKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICT 389 (958)
Q Consensus 352 ~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~ 389 (958)
+.|+.|||++|+|+.++....+++|+.|+|++|+|..
T Consensus 272 -~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 272 -AKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp -SCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred -CCCCEEECCCCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 4677888888888888766688999999999999853
No 332
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=9.9e-22 Score=209.19 Aligned_cols=165 Identities=22% Similarity=0.271 Sum_probs=118.0
Q ss_pred CCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcC
Q 002158 124 TIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSK 203 (958)
Q Consensus 124 ~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 203 (958)
.+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..
T Consensus 28 ~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 105 (251)
T 3m19_A 28 SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDH 105 (251)
T ss_dssp SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcc
Confidence 3444443 46778888888888777777888888888888888888777777778888888888888887666666777
Q ss_pred CccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEE
Q 002158 204 LSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYL 282 (958)
Q Consensus 204 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L 282 (958)
+++|++|+|++|+|++..+..|..+++|++|+|++|+++. ..+..|..+++|+.|+|++|++++.++. +..+++|+.|
T Consensus 106 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 184 (251)
T 3m19_A 106 LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184 (251)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred cCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc-cCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 7777777777777776666667777777777777777752 2233566677777777777777766653 6666667777
Q ss_pred eccCCcCCC
Q 002158 283 DLSWNHLTG 291 (958)
Q Consensus 283 ~Ls~N~l~~ 291 (958)
+|++|.+.+
T Consensus 185 ~l~~N~~~c 193 (251)
T 3m19_A 185 TLFGNQFDC 193 (251)
T ss_dssp ECCSCCBCT
T ss_pred EeeCCceeC
Confidence 766666654
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.8e-24 Score=239.42 Aligned_cols=263 Identities=17% Similarity=0.181 Sum_probs=167.6
Q ss_pred CCCCceeeCccccCCCceeeEEEEccCCcCCCCccccccCC--CCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCC
Q 002158 69 SNWTGVLCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQL--SRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLS 146 (958)
Q Consensus 69 ~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L--~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~ 146 (958)
..|.++.|.+. .++.|+++++++. +..+..+ ++++.|.+.++..+..+..+.++++|++|+|++|.++
T Consensus 37 ~~W~~~~~~~~-------~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~ 106 (336)
T 2ast_B 37 KRWYRLASDES-------LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIE 106 (336)
T ss_dssp HHHHHHHTCST-------TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEEC
T ss_pred HHHHHHhcCch-------hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcC
Confidence 36988887432 3678889888776 4556666 7777887776665555555677788888888888776
Q ss_pred CC-CChhhcCCCCCCEEecccccccccCccccccccccceEecccc-cccc-cCchhhcCCccchhhhccCC-ccccC-C
Q 002158 147 GS-LPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNN-SIGG-QIPSELSKLSTLIHLLVDNN-NLSGN-L 221 (958)
Q Consensus 147 ~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~-~~p~~l~~l~~L~~L~L~~N-~l~~~-~ 221 (958)
+. +|..+..+++|++|+|++|++++..+..++.+++|++|+|++| .+++ .++..+.++++|++|++++| .+++. +
T Consensus 107 ~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~ 186 (336)
T 2ast_B 107 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHV 186 (336)
T ss_dssp HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHH
T ss_pred HHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHH
Confidence 54 6667777888888888888777777777777788888888887 5664 25566777777777777777 77643 4
Q ss_pred CcccCCCC-CccEEEccCC--CCCCCCccccccCCCCCCEEEcccCC-CCCCCC-CCCCCCCcCEEeccCCc-CCCc-CC
Q 002158 222 PPELSELP-QLCILQLDNN--NFSASEIPATYGNFSKLVKLSLRNCN-LQGAVP-DLSRIPNLYYLDLSWNH-LTGS-IP 294 (958)
Q Consensus 222 ~~~l~~l~-~L~~L~L~~N--~l~~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~-~l~~l~~L~~L~Ls~N~-l~~~-~~ 294 (958)
+..+..++ +|++|+|++| .++...++..+.++++|+.|+|++|. +++..+ .+..+++|+.|+|++|. +... +.
T Consensus 187 ~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~ 266 (336)
T 2ast_B 187 QVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLL 266 (336)
T ss_dssp HHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGG
T ss_pred HHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHH
Confidence 55566677 7777777777 44433455666677777777777777 543332 46666777777777764 2110 11
Q ss_pred CCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhh
Q 002158 295 SKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATI 344 (958)
Q Consensus 295 ~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l 344 (958)
....+++|+.|+|++| ++......+. .+|+.|++++|++++..|..+
T Consensus 267 ~l~~~~~L~~L~l~~~-i~~~~~~~l~--~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 267 ELGEIPTLKTLQVFGI-VPDGTLQLLK--EALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp GGGGCTTCCEEECTTS-SCTTCHHHHH--HHSTTSEESCCCSCCTTCSSC
T ss_pred HHhcCCCCCEEeccCc-cCHHHHHHHH--hhCcceEEecccCccccCCcc
Confidence 1233455666666655 3322222221 124444455555555555443
No 334
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.2e-21 Score=215.08 Aligned_cols=195 Identities=23% Similarity=0.378 Sum_probs=155.7
Q ss_pred ccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccch
Q 002158 129 IGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLI 208 (958)
Q Consensus 129 i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 208 (958)
+.++++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++ ++ .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 445778888888888887 455 57888888888888888885443 8888888888888888884 33 588888888
Q ss_pred hhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCc
Q 002158 209 HLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNH 288 (958)
Q Consensus 209 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~ 288 (958)
.|+|++|++++. + .+..+++|++|+|++|+++. ++. +..+++|+.|+|++|++++.++ +..+++|+.|+|++|.
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITN--ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCC--CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCc--Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCc
Confidence 888888888864 2 38888889999999888863 333 7888889999999998887655 8888899999999999
Q ss_pred CCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCC
Q 002158 289 LTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTG 338 (958)
Q Consensus 289 l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 338 (958)
+++ ++....+++|++|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 185 l~~-~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISD-ISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCC-CGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCc-ChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 884 4446667889999999999987663 8889999999999999973
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=1.2e-21 Score=206.82 Aligned_cols=106 Identities=26% Similarity=0.319 Sum_probs=62.0
Q ss_pred CCcEEEeeCCCCCCCCChhhcCCCCCCEEeccccc-ccccCccccccccccceEeccc-ccccccCchhhcCCccchhhh
Q 002158 134 SLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENN-ITGTIPKSFANLSRVRHLHLNN-NSIGGQIPSELSKLSTLIHLL 211 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~ 211 (958)
+|++|+|++|++++..+..|.++++|++|++++|+ ++...+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666677666665555566666666666666665 6544445566666666666666 666654445555566666666
Q ss_pred ccCCccccCCCcccCCCCCcc---EEEccCC-CC
Q 002158 212 VDNNNLSGNLPPELSELPQLC---ILQLDNN-NF 241 (958)
Q Consensus 212 L~~N~l~~~~~~~l~~l~~L~---~L~L~~N-~l 241 (958)
+++|++++ +|. +..+++|+ +|++++| ++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l 143 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYM 143 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcch
Confidence 66665554 333 44444444 5555544 44
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=9.7e-22 Score=207.62 Aligned_cols=195 Identities=20% Similarity=0.232 Sum_probs=158.8
Q ss_pred CcceeeccCcccCCCCc-cccCCCCCcEEEeeCCC-CCCCCChhhcCCCCCCEEeccc-ccccccCccccccccccceEe
Q 002158 111 RLQYYFMWNDLTGTIPK-EIGNISSLIFLLLNGNK-LSGSLPDELGYLSNLNRLQVDE-NNITGTIPKSFANLSRVRHLH 187 (958)
Q Consensus 111 ~L~~L~l~n~~~~~ip~-~i~~l~~L~~L~Ls~n~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 187 (958)
+|+.|++++|....+|. .|.++++|++|+|++|. +++..+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78888887766666665 68889999999999997 8755666788899999999998 899877777888999999999
Q ss_pred cccccccccCchhhcCCccch---hhhccCC-ccccCCCcccCCCCCcc-EEEccCCCCCCCCccccccCCCCCCEEEcc
Q 002158 188 LNNNSIGGQIPSELSKLSTLI---HLLVDNN-NLSGNLPPELSELPQLC-ILQLDNNNFSASEIPATYGNFSKLVKLSLR 262 (958)
Q Consensus 188 Ls~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~~~~l~~l~~L~-~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~ 262 (958)
|++|.+++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++ .+|......++|+.|+|+
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~--~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT--SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC--EECTTTTTTCEEEEEECT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc--ccCHhhcCCCCCCEEEcC
Confidence 99999985 665 88888887 9999999 88887778899999999 9999999986 455543333889999999
Q ss_pred cCC-CCCCCCC-CCCC-CCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCc
Q 002158 263 NCN-LQGAVPD-LSRI-PNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNY 311 (958)
Q Consensus 263 ~N~-l~~~~~~-l~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~ 311 (958)
+|+ +++.++. |..+ ++|+.|+|++|++++ +|.. .+++|+.|+++++.
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~-~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK-GLEHLKELIARNTW 237 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT-TCTTCSEEECTTC-
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh-HhccCceeeccCcc
Confidence 995 8887765 8888 999999999999984 4443 67899999998763
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=1.1e-23 Score=239.44 Aligned_cols=223 Identities=21% Similarity=0.304 Sum_probs=125.9
Q ss_pred cCCCCccccCCCCCcEEEeeCCCCCCCCC----hhhcCCCCCCEEecccc---cccccCcccc-------ccccccceEe
Q 002158 122 TGTIPKEIGNISSLIFLLLNGNKLSGSLP----DELGYLSNLNRLQVDEN---NITGTIPKSF-------ANLSRVRHLH 187 (958)
Q Consensus 122 ~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~ 187 (958)
...++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+
T Consensus 21 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~ 100 (386)
T 2ca6_A 21 EKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVR 100 (386)
T ss_dssp HHTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEE
Confidence 33455555566666666666666654322 22445666666666664 3333444433 4556666666
Q ss_pred cccccccc----cCchhhcCCccchhhhccCCccccCCCccc----CCC---------CCccEEEccCCCCCCCCcc---
Q 002158 188 LNNNSIGG----QIPSELSKLSTLIHLLVDNNNLSGNLPPEL----SEL---------PQLCILQLDNNNFSASEIP--- 247 (958)
Q Consensus 188 Ls~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l----~~l---------~~L~~L~L~~N~l~~~~~p--- 247 (958)
|++|.+++ .++..+..+++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++...++
T Consensus 101 Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 180 (386)
T 2ca6_A 101 LSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 180 (386)
T ss_dssp CCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHH
Confidence 66666664 345555566666666666666643222222 222 6777777777777643444
Q ss_pred ccccCCCCCCEEEcccCCCC--C---CCC-CCCCCCCcCEEeccCCcCC----CcCCC-CCCCCCcCEEEccCCcCCCc-
Q 002158 248 ATYGNFSKLVKLSLRNCNLQ--G---AVP-DLSRIPNLYYLDLSWNHLT----GSIPS-KKLSENVTTIDLSDNYLNGS- 315 (958)
Q Consensus 248 ~~~~~l~~L~~L~L~~N~l~--~---~~~-~l~~l~~L~~L~Ls~N~l~----~~~~~-~~~~~~L~~L~Ls~N~l~~~- 315 (958)
..+..+++|+.|+|++|+++ + ..+ .+..+++|+.|+|++|.++ +.++. ...+++|++|+|++|.|++.
T Consensus 181 ~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 260 (386)
T 2ca6_A 181 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARG 260 (386)
T ss_dssp HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHH
T ss_pred HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhh
Confidence 35556677777777777776 2 223 4666677777777777764 22222 23345666666666666654
Q ss_pred ---cchhccC--CCCCCeEeeecccCCC----ccchhh
Q 002158 316 ---ILESISN--LPFLQTLSLENNFLTG----SIPATI 344 (958)
Q Consensus 316 ---~~~~~~~--l~~L~~L~L~~N~l~~----~ip~~l 344 (958)
++..+.. +++|+.|+|++|.|++ .+|..+
T Consensus 261 ~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 261 AAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp HHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 3444422 6666666666666665 355544
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=8.5e-21 Score=201.96 Aligned_cols=179 Identities=23% Similarity=0.294 Sum_probs=120.3
Q ss_pred CCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhcc
Q 002158 134 SLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVD 213 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 213 (958)
+.++++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 5678889988888 6776655 578888888888887777777788888888888888777666667777777777777
Q ss_pred CCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCc
Q 002158 214 NNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGS 292 (958)
Q Consensus 214 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ 292 (958)
+|++++..+..|..+++|++|+|++|+++. ..+..|..+++|+.|+|++|+|++.++. +..+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------------- 154 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL---------------- 154 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC----------------
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCC-cChhHhccCCcccEEECcCCcCCccCHHHcCcC----------------
Confidence 777776555666666666666666666642 2222344455555555555555444432 4444
Q ss_pred CCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCc
Q 002158 293 IPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGS 339 (958)
Q Consensus 293 ~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 339 (958)
++|++|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 155 -------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 155 -------TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp -------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred -------cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 5555555555555556666777888888888888888765
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=3.6e-21 Score=215.53 Aligned_cols=247 Identities=17% Similarity=0.144 Sum_probs=153.5
Q ss_pred cEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCc-hhhcCCccchh-hhcc
Q 002158 136 IFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIP-SELSKLSTLIH-LLVD 213 (958)
Q Consensus 136 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~-L~L~ 213 (958)
+.++.++++++ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+| .+|.++++|.. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 34556666666 555544 2456666666666664444456666666666666666544333 34556655543 4445
Q ss_pred CCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEccc-CCCCCCCCC-CCCCC-CcCEEeccCCcCC
Q 002158 214 NNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRN-CNLQGAVPD-LSRIP-NLYYLDLSWNHLT 290 (958)
Q Consensus 214 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~-l~~l~-~L~~L~Ls~N~l~ 290 (958)
+|+|+...+..|..+++|++|++++|+++. ..+..+....++..|++.+ |++..++.. |..+. .|+.|+|++|+|+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKH-LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSS-CCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhcccccccccccccccc-CCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 566666666666666666666666666652 2233444555666666644 456555543 55543 5777888888887
Q ss_pred CcCCCCCCCCCcCEEEccC-CcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEec-cCCCCCCC
Q 002158 291 GSIPSKKLSENVTTIDLSD-NYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDL-RNNSFSNI 368 (958)
Q Consensus 291 ~~~~~~~~~~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~L-s~N~l~~l 368 (958)
...+......+|++|++++ |.++.+.++.|.++++|++|+|++|+|+ .+|...+. .++.|.+ +.++++.+
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~-------~L~~L~~l~~~~l~~l 239 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLE-------NLKKLRARSTYNLKKL 239 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCT-------TCCEEECTTCTTCCCC
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhhc-------cchHhhhccCCCcCcC
Confidence 4444444456788888864 6677666677888888888888888888 66654322 3445554 33567788
Q ss_pred ccCCCCCCcceEEeCCCCCCCCCCCCC
Q 002158 369 VGDLTLPNNVTLRLGGNPICTSANIPN 395 (958)
Q Consensus 369 ~~~~~l~~L~~L~l~~N~l~~~~~~~~ 395 (958)
|....+++|+.+++. |++.|.+-..|
T Consensus 240 P~l~~l~~L~~l~l~-~~~~c~~~~~~ 265 (350)
T 4ay9_X 240 PTLEKLVALMEASLT-YPSHCCAFANW 265 (350)
T ss_dssp CCTTTCCSCCEEECS-CHHHHHHHHHS
T ss_pred CCchhCcChhhCcCC-CCccccchhhh
Confidence 876689999999985 66766554433
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=7.6e-23 Score=230.32 Aligned_cols=258 Identities=20% Similarity=0.182 Sum_probs=116.2
Q ss_pred EEccCCcCCCCccccccCCCCcceeeccCcccCCCC-----ccccCCC-CCcEEEeeCCCCCCCCChhhcCC-----CCC
Q 002158 91 LQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIP-----KEIGNIS-SLIFLLLNGNKLSGSLPDELGYL-----SNL 159 (958)
Q Consensus 91 L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip-----~~i~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~L 159 (958)
.+|+.+++++.+|..+...++|+.|++++|..+.++ ..+.+++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 345555566555554444444555555444333333 3344444 45555555555544444444332 445
Q ss_pred CEEecccccccccCccccccccccceEecccccccccCchhhcCC-ccchhhhccCCccccCCCccc----CC-CCCccE
Q 002158 160 NRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKL-STLIHLLVDNNNLSGNLPPEL----SE-LPQLCI 233 (958)
Q Consensus 160 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~l----~~-l~~L~~ 233 (958)
++|+|++|++++..+..+... +..+ ++|++|+|++|++++..+..+ .. .++|++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 142 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKT--------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITS 142 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCE
T ss_pred cEEECcCCcCChHHHHHHHHH--------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeE
Confidence 555555555444433332222 2222 444444455444443333222 22 135555
Q ss_pred EEccCCCCCCC---CccccccCCC-CCCEEEcccCCCCCCCCC-----CCCC-CCcCEEeccCCcCCCc----CCCC-CC
Q 002158 234 LQLDNNNFSAS---EIPATYGNFS-KLVKLSLRNCNLQGAVPD-----LSRI-PNLYYLDLSWNHLTGS----IPSK-KL 298 (958)
Q Consensus 234 L~L~~N~l~~~---~~p~~~~~l~-~L~~L~L~~N~l~~~~~~-----l~~l-~~L~~L~Ls~N~l~~~----~~~~-~~ 298 (958)
|+|++|+++.. .++..+..++ +|++|+|++|++++..+. +..+ ++|+.|+|++|.+++. ++.. ..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 55555555421 1122233333 555555555555544331 2233 3556666666655531 1111 11
Q ss_pred -CCCcCEEEccCCcCCCccc----hhccCCCCCCeEeeecccCCCccchhhhcccc--cCccccceEeccCCCCCCC
Q 002158 299 -SENVTTIDLSDNYLNGSIL----ESISNLPFLQTLSLENNFLTGSIPATIWQNKS--FSTKARLKIDLRNNSFSNI 368 (958)
Q Consensus 299 -~~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~--~~~~~l~~L~Ls~N~l~~l 368 (958)
.++|++|+|++|.|++..+ ..+..+++|+.|+|++|.+.+..+..+..+.. -....++.||+++|++...
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2356666666666655443 23345566666666666644333322211110 1223455666666666543
No 341
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=4.4e-21 Score=226.08 Aligned_cols=189 Identities=31% Similarity=0.377 Sum_probs=133.2
Q ss_pred CCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhcc
Q 002158 134 SLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVD 213 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 213 (958)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 56666666666664 555442 56666666666666 445 335667777777777764 555 443 67777777
Q ss_pred CCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcC
Q 002158 214 NNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSI 293 (958)
Q Consensus 214 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 293 (958)
+|+|++ +|. .+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|++++. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM--LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc--CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-ch
Confidence 777775 444 46777777777777763 454 46778888888888877555 55 78888888888888 55
Q ss_pred CCCCCCCCc-------CEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccc
Q 002158 294 PSKKLSENV-------TTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKS 349 (958)
Q Consensus 294 ~~~~~~~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~ 349 (958)
|. +..+| +.|+|++|+|+. +|..+..+++|+.|+|++|+|++.+|..+..+..
T Consensus 196 p~--~~~~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA--VPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC--CC--------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh--HHHhhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 55 23367 999999999995 6777777999999999999999999998877544
No 342
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=3.9e-21 Score=198.30 Aligned_cols=161 Identities=20% Similarity=0.239 Sum_probs=94.5
Q ss_pred CCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhc
Q 002158 133 SSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLV 212 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 212 (958)
++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 46788888888888655556777778888888877777555555666777777777777666544444555555555555
Q ss_pred cCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCC
Q 002158 213 DNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTG 291 (958)
Q Consensus 213 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~ 291 (958)
++|++++..+..|..++ +|+.|+|++|++++.++. +..+++|+.|+|++|.+.+
T Consensus 108 ~~N~l~~~~~~~~~~l~-------------------------~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLT-------------------------QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCT-------------------------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCcCcccCHhHhccCC-------------------------cCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 55555544444444444 444444444444444443 4555566666666665543
Q ss_pred cCCCCCCCCCcCEEEccCCcCCCccchhccCCC
Q 002158 292 SIPSKKLSENVTTIDLSDNYLNGSILESISNLP 324 (958)
Q Consensus 292 ~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 324 (958)
.. ++|+.|+++.|+++|.+|..++.++
T Consensus 163 ~~------~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 TC------PGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CT------TTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred CC------CCHHHHHHHHHhCCceeeccCcccc
Confidence 22 2444455555555555555554443
No 343
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.84 E-value=1.4e-22 Score=228.22 Aligned_cols=251 Identities=24% Similarity=0.267 Sum_probs=193.0
Q ss_pred EEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCc----ccccccc-ccceEecccccccccCchhhcCC-----cc
Q 002158 137 FLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIP----KSFANLS-RVRHLHLNNNSIGGQIPSELSKL-----ST 206 (958)
Q Consensus 137 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 206 (958)
++.|+.|.++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788889988888877777779999999999887766 6777888 89999999999987777777665 89
Q ss_pred chhhhccCCccccCCCccc----CCC-CCccEEEccCCCCCCCCcccc----ccC-CCCCCEEEcccCCCCCCCCC----
Q 002158 207 LIHLLVDNNNLSGNLPPEL----SEL-PQLCILQLDNNNFSASEIPAT----YGN-FSKLVKLSLRNCNLQGAVPD---- 272 (958)
Q Consensus 207 L~~L~L~~N~l~~~~~~~l----~~l-~~L~~L~L~~N~l~~~~~p~~----~~~-l~~L~~L~L~~N~l~~~~~~---- 272 (958)
|++|+|++|++++..+..+ ..+ ++|++|+|++|+++.. .+.. +.. .++|++|+|++|++++....
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~-~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSK-SSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGS-CHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcH-HHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999987766644 444 8999999999999743 2333 444 36999999999999865432
Q ss_pred -CCCCC-CcCEEeccCCcCCCcCCC-----CCCC-CCcCEEEccCCcCCCc----cchhccC-CCCCCeEeeecccCCCc
Q 002158 273 -LSRIP-NLYYLDLSWNHLTGSIPS-----KKLS-ENVTTIDLSDNYLNGS----ILESISN-LPFLQTLSLENNFLTGS 339 (958)
Q Consensus 273 -l~~l~-~L~~L~Ls~N~l~~~~~~-----~~~~-~~L~~L~Ls~N~l~~~----~~~~~~~-l~~L~~L~L~~N~l~~~ 339 (958)
+..++ +|++|+|++|++++..+. .... ++|++|+|++|.|++. ++..+.. .++|++|+|++|+|++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 34554 999999999999854432 1223 5999999999999874 4455555 45999999999999977
Q ss_pred cchhhhcccccCccccceEeccCCCCCCCccC--------C-CCCCcceEEeCCCCCCC
Q 002158 340 IPATIWQNKSFSTKARLKIDLRNNSFSNIVGD--------L-TLPNNVTLRLGGNPICT 389 (958)
Q Consensus 340 ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~--------~-~l~~L~~L~l~~N~l~~ 389 (958)
.+..+.... -..+.|+.|+|++|.+..+... . .+++|+.|++++|++..
T Consensus 241 ~~~~l~~~~-~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 241 SLENLKLLK-DSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp CHHHHHHTT-TTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHH-hcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 665554321 1245688999999996665432 2 78889999999999854
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=4.7e-23 Score=234.26 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=167.2
Q ss_pred ccccccCCCCcceeeccCcccCC-----CCccccCCCCCcEEEeeCC---CCCCCCChhh-------cCCCCCCEEeccc
Q 002158 102 LAPELGQLSRLQYYFMWNDLTGT-----IPKEIGNISSLIFLLLNGN---KLSGSLPDEL-------GYLSNLNRLQVDE 166 (958)
Q Consensus 102 ~~~~l~~L~~L~~L~l~n~~~~~-----ip~~i~~l~~L~~L~Ls~n---~l~~~~p~~l-------~~l~~L~~L~L~~ 166 (958)
++..+..+++|+.|++++|..+. ++..+.++++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 45556667777777776554432 3344667777777777775 3444555544 5677778888888
Q ss_pred ccccc----cCccccccccccceEecccccccccCchhh----cCC---------ccchhhhccCCccc-cCCC---ccc
Q 002158 167 NNITG----TIPKSFANLSRVRHLHLNNNSIGGQIPSEL----SKL---------STLIHLLVDNNNLS-GNLP---PEL 225 (958)
Q Consensus 167 N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l----~~l---------~~L~~L~L~~N~l~-~~~~---~~l 225 (958)
|.+++ .++..+..+++|++|+|++|.+++..+..+ ..+ ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 77776 366677777778888888887764333333 333 77888888888876 3333 356
Q ss_pred CCCCCccEEEccCCCCCCC----CccccccCCCCCCEEEcccCCCC----CCC-CCCCCCCCcCEEeccCCcCCCc----
Q 002158 226 SELPQLCILQLDNNNFSAS----EIPATYGNFSKLVKLSLRNCNLQ----GAV-PDLSRIPNLYYLDLSWNHLTGS---- 292 (958)
Q Consensus 226 ~~l~~L~~L~L~~N~l~~~----~~p~~~~~l~~L~~L~L~~N~l~----~~~-~~l~~l~~L~~L~Ls~N~l~~~---- 292 (958)
..+++|++|+|++|+++.. ..+..+..+++|+.|+|++|.++ ... ..+..+++|+.|+|++|.+++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 6778888888888887521 23336777888888888888884 222 2477788888999999888753
Q ss_pred CCCC---CCCCCcCEEEccCCcCCC----ccchhc-cCCCCCCeEeeecccCCCccc
Q 002158 293 IPSK---KLSENVTTIDLSDNYLNG----SILESI-SNLPFLQTLSLENNFLTGSIP 341 (958)
Q Consensus 293 ~~~~---~~~~~L~~L~Ls~N~l~~----~~~~~~-~~l~~L~~L~L~~N~l~~~ip 341 (958)
++.. ..+++|+.|+|++|.|++ .++..+ .++++|+.|+|++|++++..+
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 2222 236889999999999988 477777 678999999999999997775
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=5.5e-21 Score=209.89 Aligned_cols=195 Identities=24% Similarity=0.372 Sum_probs=148.4
Q ss_pred cCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceE
Q 002158 107 GQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHL 186 (958)
Q Consensus 107 ~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 186 (958)
..+++|+.|.++++....+| .+..+++|++|+|++|.+++ ++. +..+++|++|+|++|++++. +.+..+++|++|
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HHcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 45666777777766666665 57778888888888888874 444 78888888888888888753 367788888888
Q ss_pred ecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCC
Q 002158 187 HLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNL 266 (958)
Q Consensus 187 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l 266 (958)
+|++|++++ ++. +..+++|+.|++++|++++..+ +..+++|++|+|++|+++. ++. +..+++|+.|+|++|++
T Consensus 113 ~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 113 DLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD--LTP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp ECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC--CGG-GTTCTTCCEEECCSSCC
T ss_pred ECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC--Chh-hcCCCCCCEEECCCCcc
Confidence 888888875 343 7888888888888888875433 7788888888888888863 344 78888888888888888
Q ss_pred CCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCc
Q 002158 267 QGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGS 315 (958)
Q Consensus 267 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~ 315 (958)
++.++ +..+++|++|+|++|++++.. ....+++|+.|+|++|.+++.
T Consensus 186 ~~~~~-l~~l~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 186 SDISP-LASLPNLIEVHLKNNQISDVS-PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCCGG-GGGCTTCCEEECTTSCCCBCG-GGTTCTTCCEEEEEEEEEECC
T ss_pred CcChh-hcCCCCCCEEEccCCccCccc-cccCCCCCCEEEccCCeeecC
Confidence 86654 778888888888888888544 466678888999998888753
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.3e-20 Score=211.03 Aligned_cols=246 Identities=20% Similarity=0.193 Sum_probs=169.9
Q ss_pred CCCCCCCceeeCccccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCc-cccCCCCCcEEEeeCCC
Q 002158 66 PCMSNWTGVLCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPK-EIGNISSLIFLLLNGNK 144 (958)
Q Consensus 66 ~c~~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~-~i~~l~~L~~L~Ls~n~ 144 (958)
.|.|.|+.|.|.+ ++++ .+|..+ .++++.|++++|.+..+|. .|.++++|++|+|++|.
T Consensus 6 ~C~C~~~~v~C~~-----------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 65 (350)
T 4ay9_X 6 ICHCSNRVFLCQE-----------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQND 65 (350)
T ss_dssp SSEEETTEEEEES-----------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCT
T ss_pred ccEeeCCEEEecC-----------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCC
Confidence 3777888888843 3344 345444 2567778787777777775 47888888888888888
Q ss_pred CCCCCCh-hhcCCCCCCE-EecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccC-CccccCC
Q 002158 145 LSGSLPD-ELGYLSNLNR-LQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDN-NNLSGNL 221 (958)
Q Consensus 145 l~~~~p~-~l~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~ 221 (958)
+.+.+|. .|.++++|++ +.+..|+++...|..|..+++|++|++++|+|++..+..+....++..|++.+ |++....
T Consensus 66 i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 66 VLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp TCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred CCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc
Confidence 7655553 4677777665 55666888877777788888888888888888866665666666777777754 5666666
Q ss_pred CcccCCCC-CccEEEccCCCCCCCCccccccCCCCCCEEEccc-CCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCCCC
Q 002158 222 PPELSELP-QLCILQLDNNNFSASEIPATYGNFSKLVKLSLRN-CNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSKKL 298 (958)
Q Consensus 222 ~~~l~~l~-~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~ 298 (958)
+..|..+. .++.|+|++|+|+ .++.......+|+.|++++ |.++.++++ |..+++|++|+|++|+|+ .+|. ..
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~--~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~-~~ 221 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQ--EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPS-YG 221 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCC--EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCS-SS
T ss_pred ccchhhcchhhhhhcccccccc--CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccCh-hh
Confidence 66666664 5778888888885 4555555567788888864 667666654 778888888888888887 4443 23
Q ss_pred CCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccC
Q 002158 299 SENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFL 336 (958)
Q Consensus 299 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 336 (958)
+.+|+.|.+.++.--..+| .+..+++|+.+++.++.-
T Consensus 222 ~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 222 LENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPSH 258 (350)
T ss_dssp CTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHHH
T ss_pred hccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCcc
Confidence 5677777766654333444 367778888888776543
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.82 E-value=4.4e-22 Score=221.67 Aligned_cols=243 Identities=23% Similarity=0.307 Sum_probs=127.1
Q ss_pred CcEEEeeCCCCCCCCChhhcCC--CCCCEEecccccccccCccccccccccceEeccccccccc-CchhhcCCccchhhh
Q 002158 135 LIFLLLNGNKLSGSLPDELGYL--SNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQ-IPSELSKLSTLIHLL 211 (958)
Q Consensus 135 L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~ 211 (958)
++.|++++|.+. +..+..+ ++|+.|++++|.+++..+. +..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 555566555554 3444444 5566666666666544433 34456666666666665543 555555566666666
Q ss_pred ccCCccccCCCcccCCCCCccEEEccCC-CCCCCCccccccCCCCCCEEEcccC-CCCCC-CC-CCCCCC-CcCEEeccC
Q 002158 212 VDNNNLSGNLPPELSELPQLCILQLDNN-NFSASEIPATYGNFSKLVKLSLRNC-NLQGA-VP-DLSRIP-NLYYLDLSW 286 (958)
Q Consensus 212 L~~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~-~l~~l~-~L~~L~Ls~ 286 (958)
|++|++++..+..+..+++|++|+|++| .++...++..+.++++|++|+|++| .+++. .+ .+..++ +|++|+|++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 6666655555555555666666666666 4442224445555666666666666 55542 11 244555 666666666
Q ss_pred C--cCC-CcCCCC-CCCCCcCEEEccCCc-CCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEecc
Q 002158 287 N--HLT-GSIPSK-KLSENVTTIDLSDNY-LNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLR 361 (958)
Q Consensus 287 N--~l~-~~~~~~-~~~~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls 361 (958)
| .++ +.++.. ..+++|++|+|++|. +++..+..+..+++|++|+|++|. +..+..+..+.. .+.|+.|+++
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~--~~~L~~L~l~ 280 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGE--IPTLKTLQVF 280 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGG--CTTCCEEECT
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhc--CCCCCEEecc
Confidence 6 332 122211 234566666666666 555555566666666666666664 222332212211 2345566666
Q ss_pred CCCCCCCccCC--CC-CCcceEEeCCCCCCC
Q 002158 362 NNSFSNIVGDL--TL-PNNVTLRLGGNPICT 389 (958)
Q Consensus 362 ~N~l~~l~~~~--~l-~~L~~L~l~~N~l~~ 389 (958)
+| + +... .+ ..++.|++++|.++.
T Consensus 281 ~~-i---~~~~~~~l~~~l~~L~l~~n~l~~ 307 (336)
T 2ast_B 281 GI-V---PDGTLQLLKEALPHLQINCSHFTT 307 (336)
T ss_dssp TS-S---CTTCHHHHHHHSTTSEESCCCSCC
T ss_pred Cc-c---CHHHHHHHHhhCcceEEecccCcc
Confidence 66 2 2211 12 234555566666643
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=4.5e-21 Score=226.04 Aligned_cols=212 Identities=26% Similarity=0.342 Sum_probs=126.1
Q ss_pred ccCCCCC-CCCCCC---CCCce-eeCccccCCCceeeEEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccC
Q 002158 57 HLRNWNK-GDPCMS---NWTGV-LCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGN 131 (958)
Q Consensus 57 ~l~~W~~-~~~c~~---~w~gV-~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~ 131 (958)
.+.+|.. .++|.. .|.|+ .|... +++.|+|++|++++ +|..+. ++
T Consensus 32 ~l~~W~~~~~~~~~~~~~~~~l~~C~~~-------~L~~L~Ls~n~L~~-lp~~l~--~~-------------------- 81 (571)
T 3cvr_A 32 AWDKWEKQALPGENRNEAVSLLKECLIN-------QFSELQLNRLNLSS-LPDNLP--PQ-------------------- 81 (571)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHHT-------TCSEEECCSSCCSC-CCSCCC--TT--------------------
T ss_pred HHHHHhccCCccccccchhhhccccccC-------CccEEEeCCCCCCc-cCHhHc--CC--------------------
Confidence 3556743 355533 58999 78532 57788888887776 444332 44
Q ss_pred CCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhh
Q 002158 132 ISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLL 211 (958)
Q Consensus 132 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 211 (958)
|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+
T Consensus 82 ---L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 146 (571)
T 3cvr_A 82 ---ITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYIN 146 (571)
T ss_dssp ---CSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred ---CCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEe
Confidence 555555555555 344 234555555555555553 443 333 55555555555553 333 445555556
Q ss_pred ccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCc-------CEEec
Q 002158 212 VDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNL-------YYLDL 284 (958)
Q Consensus 212 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L-------~~L~L 284 (958)
|++|+|++ +|. .+++|++|+|++|+|+. +|. |. ++|+.|+|++|+|+.++. +.. +| +.|+|
T Consensus 147 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~--lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~L 214 (571)
T 3cvr_A 147 ADNNQLTM-LPE---LPTSLEVLSVRNNQLTF--LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRC 214 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC--CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEEC
T ss_pred CCCCccCc-CCC---cCCCcCEEECCCCCCCC--cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEec
Confidence 66665554 333 34566666666666652 444 43 666666666666665544 433 55 88888
Q ss_pred cCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCC
Q 002158 285 SWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPF 325 (958)
Q Consensus 285 s~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 325 (958)
++|+|+...+....+++|+.|+|++|.|++..|..|..++.
T Consensus 215 s~N~l~~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 215 RENRITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CSSCCCCCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCCcceecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 88888843333455788999999999999888888877644
No 349
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=3.6e-20 Score=192.74 Aligned_cols=120 Identities=23% Similarity=0.238 Sum_probs=74.9
Q ss_pred CCCCCCcCEEeccCCcCCCcCCCC-CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccC
Q 002158 273 LSRIPNLYYLDLSWNHLTGSIPSK-KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFS 351 (958)
Q Consensus 273 l~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~ 351 (958)
|.++++|++|+|++|.|++..+.. ..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+.
T Consensus 76 ~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~------ 149 (220)
T 2v9t_B 76 FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS------ 149 (220)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT------
T ss_pred hhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHh------
Confidence 344444444444444444222221 2335555555555555556667777788888888888887743332221
Q ss_pred ccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCCCCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCccccc
Q 002158 352 TKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPICTSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYV 431 (958)
Q Consensus 352 ~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~ 431 (958)
.+++|+.|+|++||| .|+|...++..|+...
T Consensus 150 ---------------------~l~~L~~L~L~~N~~----------------------------~c~c~l~~l~~~l~~~ 180 (220)
T 2v9t_B 150 ---------------------PLRAIQTMHLAQNPF----------------------------ICDCHLKWLADYLHTN 180 (220)
T ss_dssp ---------------------TCTTCCEEECCSSCE----------------------------ECSGGGHHHHHHHHHC
T ss_pred ---------------------CCCCCCEEEeCCCCc----------------------------CCCCccHHHHHHHHhC
Confidence 345677777777766 6788888888888877
Q ss_pred CCCCCCceeeeeceee
Q 002158 432 PASPEPCFCAAPLRIG 447 (958)
Q Consensus 432 ~~~~~~~~c~sp~~~~ 447 (958)
+.......|++|...+
T Consensus 181 ~~~~~~~~C~~P~~l~ 196 (220)
T 2v9t_B 181 PIETSGARCTSPRRLA 196 (220)
T ss_dssp CCBCSCCBEEESGGGT
T ss_pred CCCccCCCcCCchHHc
Confidence 7666678999998765
No 350
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=6.6e-20 Score=190.76 Aligned_cols=162 Identities=22% Similarity=0.247 Sum_probs=99.9
Q ss_pred ccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEcc
Q 002158 231 LCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLS 308 (958)
Q Consensus 231 L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls 308 (958)
+++|+|++|+++....+..|.++++|+.|+|++|+|++.++ .|..+++|++|+|++|.+++..+. ...+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 34555555555422122335555555555555555555554 355666666666666666543333 2334566666666
Q ss_pred CCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCC
Q 002158 309 DNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPIC 388 (958)
Q Consensus 309 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~ 388 (958)
+|+|++..+..|..+++|++|+|++|+|++..|..+. .+++|+.|+|++|||
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------------~l~~L~~L~L~~N~l- 165 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD---------------------------TLHSLSTLNLLANPF- 165 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTT---------------------------TCTTCCEEECCSCCE-
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhc---------------------------CCCCCCEEEecCcCC-
Confidence 6666666666666777777777777776654444331 456777888877777
Q ss_pred CCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCCCceeeeeceee
Q 002158 389 TSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPEPCFCAAPLRIG 447 (958)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~~~~c~sp~~~~ 447 (958)
.|+|+..++..|++..........|++|...+
T Consensus 166 ---------------------------~c~c~l~~l~~~~~~~~~~~~~~~C~~P~~l~ 197 (220)
T 2v70_A 166 ---------------------------NCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLK 197 (220)
T ss_dssp ---------------------------ECSGGGHHHHHHHHHSCCBCCCCEEEESGGGT
T ss_pred ---------------------------cCCCchHHHHHHHHhcCccccCCccCCChHHC
Confidence 67888888888888766666667899998755
No 351
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=1.8e-19 Score=202.58 Aligned_cols=79 Identities=24% Similarity=0.364 Sum_probs=37.2
Q ss_pred CEEecccccccccCccccccccccceEecccccccccCchhhc-CCccchhhhccCCccccCCCcccCCCCCccEEEccC
Q 002158 160 NRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELS-KLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDN 238 (958)
Q Consensus 160 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 238 (958)
+.+++++|+++ .+|..+. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 35555555555 3343332 2345555555555544444443 444445555544444444444444444444444444
Q ss_pred CCC
Q 002158 239 NNF 241 (958)
Q Consensus 239 N~l 241 (958)
|+|
T Consensus 98 N~l 100 (361)
T 2xot_A 98 NHL 100 (361)
T ss_dssp SCC
T ss_pred CcC
Confidence 444
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.78 E-value=1.2e-18 Score=179.65 Aligned_cols=158 Identities=22% Similarity=0.222 Sum_probs=110.0
Q ss_pred ccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEc
Q 002158 182 RVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSL 261 (958)
Q Consensus 182 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L 261 (958)
+|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|+++ ...+..|.++++|+.|+|
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEc
Confidence 3444444444444333334444555555555555555444445566666666666666665 223345677777888888
Q ss_pred ccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCc
Q 002158 262 RNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGS 339 (958)
Q Consensus 262 ~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 339 (958)
++|++++.++. +..+++|+.|+|++|.+++..+. ...+++|+.|+|++|.+. +.+++|++|+++.|+++|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~-------~~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD-------CTCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC-------CCTTTTHHHHHHHHHCTTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee-------cCCCCHHHHHHHHHhCCce
Confidence 88888777775 78899999999999999965554 355789999999999886 3567899999999999999
Q ss_pred cchhhhcc
Q 002158 340 IPATIWQN 347 (958)
Q Consensus 340 ip~~l~~~ 347 (958)
+|..+..+
T Consensus 181 ip~~~~~l 188 (208)
T 2o6s_A 181 VRNSAGSV 188 (208)
T ss_dssp BBCTTSSB
T ss_pred eeccCccc
Confidence 99887654
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=2.9e-19 Score=194.40 Aligned_cols=172 Identities=26% Similarity=0.372 Sum_probs=91.1
Q ss_pred cCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchh
Q 002158 130 GNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIH 209 (958)
Q Consensus 130 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 209 (958)
..+++|++|++++|.++ .++ .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++ ++ .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 34555666666666655 233 25555666666666666654332 5555555555555555553 22 2444444444
Q ss_pred hhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcC
Q 002158 210 LLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHL 289 (958)
Q Consensus 210 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l 289 (958)
|+|++|++++. ..+..++ +|+.|+|++|++++. +.+..+++|+.|+|++|.+
T Consensus 117 L~L~~n~i~~~--~~l~~l~-------------------------~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLP-------------------------QLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp EECTTSCCCCC--GGGGGCT-------------------------TCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCC-------------------------CCCEEEccCCcCCcc-hhhccCCCCCEEEccCCcc
Confidence 44444444432 2344444 444444444444433 3344455555555555555
Q ss_pred CCcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCC
Q 002158 290 TGSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTG 338 (958)
Q Consensus 290 ~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 338 (958)
++..+ ...+++|+.|+|++|.|++. + .+..+++|+.|+|++|+++.
T Consensus 169 ~~~~~-l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 169 SDIVP-LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCGG-GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccchh-hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 53322 44445556666666666543 2 36777777778887777763
No 354
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.77 E-value=1.4e-20 Score=226.55 Aligned_cols=295 Identities=15% Similarity=0.090 Sum_probs=166.8
Q ss_pred eeEEEEccCCcCCCC----ccccccCCCCcceeeccCcccC-----CCCccccCCCCCcEEEeeCCCCCCCCChhhcCCC
Q 002158 87 HVRELQLLSMNLSGN----LAPELGQLSRLQYYFMWNDLTG-----TIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLS 157 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~----~~~~l~~L~~L~~L~l~n~~~~-----~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~ 157 (958)
++++|+|.+|.+++. ++..+..+++|+.|+++++... .++..+.++++|++|+|++|.+.+ +|..+..++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 566777777766554 3334455666666666644432 233344566667777776666653 455555556
Q ss_pred CCCEEecccccc--------------------------cccCccccccccccceEecccccccccCc-hhhcCCccchhh
Q 002158 158 NLNRLQVDENNI--------------------------TGTIPKSFANLSRVRHLHLNNNSIGGQIP-SELSKLSTLIHL 210 (958)
Q Consensus 158 ~L~~L~L~~N~l--------------------------~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L 210 (958)
+|++|+++.+.. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+.|
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L 323 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVL 323 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEE
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEE
Confidence 666665553211 12445555666667777777766553322 334666677777
Q ss_pred hccCCccc-cCCCcccCCCCCccEEEcc-----------CCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCC-C
Q 002158 211 LVDNNNLS-GNLPPELSELPQLCILQLD-----------NNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSR-I 276 (958)
Q Consensus 211 ~L~~N~l~-~~~~~~l~~l~~L~~L~L~-----------~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~-l 276 (958)
+++ |.+. +.++..+..+++|++|+|+ .|.++...++.....+++|++|+++.|++++.... +.. +
T Consensus 324 ~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~ 402 (592)
T 3ogk_B 324 ETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYL 402 (592)
T ss_dssp EEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHC
T ss_pred ecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhC
Confidence 766 3333 2223333456677777777 34554322333345567777777777776654332 332 6
Q ss_pred CCcCEEecc----CCcCCCcCCC------CCCCCCcCEEEccCCc--CCCccchhccC-CCCCCeEeeecccCCCcc-ch
Q 002158 277 PNLYYLDLS----WNHLTGSIPS------KKLSENVTTIDLSDNY--LNGSILESISN-LPFLQTLSLENNFLTGSI-PA 342 (958)
Q Consensus 277 ~~L~~L~Ls----~N~l~~~~~~------~~~~~~L~~L~Ls~N~--l~~~~~~~~~~-l~~L~~L~L~~N~l~~~i-p~ 342 (958)
++|+.|+|+ .|.+++.... ...+++|++|+|++|. +++..+..+.. +++|++|+|++|++++.. +.
T Consensus 403 ~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 482 (592)
T 3ogk_B 403 KNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME 482 (592)
T ss_dssp CSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH
T ss_pred CCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH
Confidence 677777775 5566532111 1235677777776433 66555555443 677777777777776532 22
Q ss_pred hhhcccccCccccceEeccCCCCCCC--ccCC-CCCCcceEEeCCCCCC
Q 002158 343 TIWQNKSFSTKARLKIDLRNNSFSNI--VGDL-TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 343 ~l~~~~~~~~~~l~~L~Ls~N~l~~l--~~~~-~l~~L~~L~l~~N~l~ 388 (958)
.+.. .+.|+.|+|++|.|+.. +... .+++|+.|+|++|+++
T Consensus 483 ~~~~-----~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 483 FSRG-----CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp HHTC-----CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred HHhc-----CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 2222 24566777777776542 2222 5677777777777764
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=8.3e-19 Score=190.75 Aligned_cols=191 Identities=23% Similarity=0.313 Sum_probs=141.9
Q ss_pred CEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCC
Q 002158 160 NRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNN 239 (958)
Q Consensus 160 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 239 (958)
..+.+..+.+++.. .+..+++|+.|++++|.++. ++ .+..+++|+.|+|++|++++..+ +..+++|++|+|++|
T Consensus 27 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 27 IKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 33444444444321 23456666666666666663 33 36666777777777777765433 777788888888888
Q ss_pred CCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccchh
Q 002158 240 NFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILES 319 (958)
Q Consensus 240 ~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 319 (958)
+++. ++ .+..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++. +....+++|+.|+|++|+|++..+
T Consensus 101 ~l~~--~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 101 KVKD--LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp CCCC--GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred cCCC--Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--
Confidence 8753 33 478888888888888888875 5688899999999999999954 666778999999999999998766
Q ss_pred ccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCcc
Q 002158 320 ISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVG 370 (958)
Q Consensus 320 ~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~ 370 (958)
+..+++|+.|+|++|+|++ +|. +.. .+.|+.|++++|+++..+.
T Consensus 174 l~~l~~L~~L~L~~N~i~~-l~~-l~~-----l~~L~~L~l~~n~i~~~~~ 217 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISD-LRA-LAG-----LKNLDVLELFSQECLNKPI 217 (291)
T ss_dssp GTTCTTCCEEECCSSCCCB-CGG-GTT-----CTTCSEEEEEEEEEECCCE
T ss_pred hcCCCccCEEECCCCcCCC-Chh-hcc-----CCCCCEEECcCCcccCCcc
Confidence 9999999999999999984 443 433 3467799999999987553
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=2.8e-19 Score=213.10 Aligned_cols=147 Identities=31% Similarity=0.485 Sum_probs=60.4
Q ss_pred CCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhh
Q 002158 131 NISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHL 210 (958)
Q Consensus 131 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 210 (958)
.+++|+.|+|++|.+. .+| .+..+++|++|+|++|+|++..+ +..+++|+.|+|++|.|++ ++ .+..+++|+.|
T Consensus 41 ~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 3444444444444444 222 24444444444444444443322 4444444444444444442 11 23444444444
Q ss_pred hccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcC
Q 002158 211 LVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHL 289 (958)
Q Consensus 211 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l 289 (958)
+|++|+|++. ..+..+++|+.|+|++|+++. + ..+..+++|+.|+|++|+|++.++ +..+++|+.|+|++|.|
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~--l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITD--I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCC--C-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCC--c-hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCC
Confidence 4444444321 223344444444444444431 1 233334444444444444433333 33333333333333333
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=1.5e-18 Score=180.50 Aligned_cols=133 Identities=22% Similarity=0.286 Sum_probs=75.8
Q ss_pred CCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhc
Q 002158 133 SSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLV 212 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 212 (958)
++|++|+|++|.+++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45666666666666544445666666666666666666555555666666666666666555433333444444554444
Q ss_pred cCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCC
Q 002158 213 DNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLT 290 (958)
Q Consensus 213 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~ 290 (958)
++|+|++..+. .|.++++|+.|+|++|+|++.++. +..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVD-------------------------AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTT-------------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHH-------------------------HcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 44444444444 444455555555555555555543 566667777777777765
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=3.4e-18 Score=179.00 Aligned_cols=142 Identities=21% Similarity=0.269 Sum_probs=88.2
Q ss_pred CCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcC
Q 002158 124 TIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSK 203 (958)
Q Consensus 124 ~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 203 (958)
.+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|+|++.
T Consensus 33 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l------- 103 (229)
T 3e6j_A 33 SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVL------- 103 (229)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC-------
T ss_pred ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCcc-------
Confidence 4444332 5677777777777766666666677777777777766644444455555555555555555533
Q ss_pred CccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEE
Q 002158 204 LSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYL 282 (958)
Q Consensus 204 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L 282 (958)
.+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. +..+++|+.|
T Consensus 104 -----------------~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 104 -----------------PSAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp -----------------CTTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred -----------------ChhHhCcchhhCeEeccCCccc--ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 3344445555555555555554 4455566666666666666666666654 6777778888
Q ss_pred eccCCcCCCcC
Q 002158 283 DLSWNHLTGSI 293 (958)
Q Consensus 283 ~Ls~N~l~~~~ 293 (958)
+|++|.+....
T Consensus 165 ~l~~N~~~c~c 175 (229)
T 3e6j_A 165 YLFGNPWDCEC 175 (229)
T ss_dssp ECTTSCBCTTB
T ss_pred EeeCCCccCCc
Confidence 88888776543
No 359
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=6.5e-20 Score=224.19 Aligned_cols=194 Identities=19% Similarity=0.191 Sum_probs=69.8
Q ss_pred CHhHHHHHHHHHHHccc-CccccCCCCCCCCCCCCCCceeeCccccCCCceeeEEEEccCCcCCCCccccccCCCCccee
Q 002158 37 DPQEASALRAIKNSLVD-SMNHLRNWNKGDPCMSNWTGVLCFDTVETDGHLHVRELQLLSMNLSGNLAPELGQLSRLQYY 115 (958)
Q Consensus 37 ~~~~~~al~~~k~~~~~-~~~~l~~W~~~~~c~~~w~gV~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L 115 (958)
...+..+|.++..++.. ....-..|.....-.+.|.++.+.. .+++.|+|..+++... +..+.....|..+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-------~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~ 201 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-------PLTPKIELFANGKDEA-NQALLQHKKLSQY 201 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-------CccceEEeeCCCCCcc-hhhHhhcCccCcc
Confidence 34567788888877642 2233355643322233688887743 3688999988887763 3333333333332
Q ss_pred ec-----cCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEeccc
Q 002158 116 FM-----WNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNN 190 (958)
Q Consensus 116 ~l-----~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 190 (958)
.+ .++.....|..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|.+|++|++|+|++
T Consensus 202 ~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 279 (727)
T 4b8c_D 202 SIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279 (727)
T ss_dssp --------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTT
T ss_pred cccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcC
Confidence 21 22222233444555555555555555555 45555555555555555555555 4555555555555555555
Q ss_pred ccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCC
Q 002158 191 NSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 191 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 242 (958)
|.|+ .+|..|.++++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|+
T Consensus 280 N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 280 NRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp SCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 5555 44555555555555555555554 33444555555555555555554
No 360
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.2e-18 Score=185.80 Aligned_cols=136 Identities=17% Similarity=0.119 Sum_probs=107.7
Q ss_pred CCCCceeeeeCCeEEEEEEE-CCCcE--EEEEEeccCChh------------------------cHHHHHHHHHHHHccC
Q 002158 627 FSSSTQVGQGGYGKVYKGIL-SDNTT--VAIKRAEEGSLQ------------------------GQNEFLTEIKLLSRLH 679 (958)
Q Consensus 627 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 679 (958)
|...+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999998 68888 999987543111 1136889999999998
Q ss_pred CCCc--ceEEEEEEeCCeEEEEEEecCC-C----CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhh-hcCCCCeeccC
Q 002158 680 HRNL--VSLLGYCDEEGEQMLVYEFVPN-G----TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLH-TEAHPPVFHRD 751 (958)
Q Consensus 680 H~ni--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH-~~~~~~iiH~D 751 (958)
|+++ ..++++ +..+|||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8754 445543 356899999942 4 78777532 235567899999999999999 888 99999
Q ss_pred CCccceEecCCCCeEEeeeeeeccc
Q 002158 752 IKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 752 ikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999998743
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=178.57 Aligned_cols=133 Identities=20% Similarity=0.242 Sum_probs=67.9
Q ss_pred CcEEEeeCCCCCCCCC-hhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhcc
Q 002158 135 LIFLLLNGNKLSGSLP-DELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVD 213 (958)
Q Consensus 135 L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 213 (958)
+++|+|++|.+++..| ..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3455555555554322 234455555555555555554444445555555555555555544444444444444444444
Q ss_pred CCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCc
Q 002158 214 NNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGS 292 (958)
Q Consensus 214 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ 292 (958)
+|+|++..| ..|.++++|+.|+|++|+|++.++ .|..+++|+.|+|++|.+.+.
T Consensus 114 ~N~l~~~~~-------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRITCVGN-------------------------DSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCCCBCT-------------------------TSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCCeECH-------------------------hHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 444444333 444455555555555555555544 356666666666666666543
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=2.8e-18 Score=204.51 Aligned_cols=189 Identities=28% Similarity=0.378 Sum_probs=154.6
Q ss_pred EEEEccCCcCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccccc
Q 002158 89 RELQLLSMNLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENN 168 (958)
Q Consensus 89 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~ 168 (958)
..+.|..+.+.+.++ +..|++|+.|.++++....+| .|..+++|+.|+|++|.+++..| +..+++|++|+|++|+
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 334455555554433 567888889989888777776 58899999999999999985444 8899999999999999
Q ss_pred ccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccc
Q 002158 169 ITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPA 248 (958)
Q Consensus 169 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~ 248 (958)
|++ ++ .+..+++|+.|+|++|.|++ + ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|+. ++.
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~--~~~ 170 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD--IVP 170 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC--CGG
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC--chh
Confidence 985 33 78899999999999999985 3 4588899999999999999865 678899999999999999973 233
Q ss_pred cccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCc
Q 002158 249 TYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGS 292 (958)
Q Consensus 249 ~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ 292 (958)
+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|.+.+.
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECC
T ss_pred -hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCC
Confidence 88999999999999999876 5688899999999999998753
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=1.8e-20 Score=222.06 Aligned_cols=190 Identities=17% Similarity=0.175 Sum_probs=130.5
Q ss_pred cCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccccc-------------ccccCccccccccccceEe-cccccccc
Q 002158 130 GNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENN-------------ITGTIPKSFANLSRVRHLH-LNNNSIGG 195 (958)
Q Consensus 130 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 195 (958)
..+++|+.|+|++|.++ .+|..++++++|++|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 44556666666666665 566666666666666665553 3344555555555555555 444433
Q ss_pred cCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCC
Q 002158 196 QIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSR 275 (958)
Q Consensus 196 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~ 275 (958)
.+|..+.+++|.++...+ ..|+.|+|++|+|+. +|. ++++++|+.|+|++|+|+.++..+..
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~--lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV--LCH-LEQLLLVTHLDLSHNRLRALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS--CCC-GGGGTTCCEEECCSSCCCCCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCC--CcC-ccccccCcEeecCcccccccchhhhc
Confidence 244555556666653222 247888888888863 566 88888888888888888866556888
Q ss_pred CCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCcc-chhccCCCCCCeEeeecccCCCccc
Q 002158 276 IPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSI-LESISNLPFLQTLSLENNFLTGSIP 341 (958)
Q Consensus 276 l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~ip 341 (958)
+++|+.|+|++|.|++ +|....+++|+.|+|++|+|++.. |..|..+++|+.|+|++|+|++..|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 8888888888888885 566666788888888888888776 8888888888888888888875433
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.3e-17 Score=174.51 Aligned_cols=135 Identities=21% Similarity=0.219 Sum_probs=105.9
Q ss_pred cccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEE
Q 002158 181 SRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLS 260 (958)
Q Consensus 181 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 260 (958)
++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++|+|+. ..+..|..+++|+.|+
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTV-LPSAVFDRLVHLKELF 118 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCc-cChhHhCcchhhCeEe
Confidence 455555566666655555666666666666666666665556677888999999999999973 3455789999999999
Q ss_pred cccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEccCCcCCCcc
Q 002158 261 LRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDNYLNGSI 316 (958)
Q Consensus 261 L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N~l~~~~ 316 (958)
|++|+|+.++..+..+++|+.|+|++|+|++..+. ...+++|+.|+|++|.+....
T Consensus 119 Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 119 MCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred ccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 99999998877899999999999999999965543 345689999999999998654
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=3.9e-18 Score=191.57 Aligned_cols=179 Identities=22% Similarity=0.231 Sum_probs=137.7
Q ss_pred cEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccc-cccccceEecccccccccCchhhcCCccchhhhccC
Q 002158 136 IFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFA-NLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDN 214 (958)
Q Consensus 136 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 214 (958)
+.+++++|.++ .+|..+. ..|++|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 68999999999 6887664 4699999999999988888887 999999999999999988888999999999999999
Q ss_pred CccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcC
Q 002158 215 NNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSI 293 (958)
Q Consensus 215 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~ 293 (958)
|+|++..+..|..+++|++|+|++|+|+. ..+..|.++++|+.|+|++|+|++++.. +..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~------------------ 158 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQISRFPVELIKD------------------ 158 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-------------------
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccE-ECHHHhCCcccCCEEECCCCcCCeeCHHHhcC------------------
Confidence 99998888889999999999999998863 3356677777777777777777655443 210
Q ss_pred CCCCCCCCcCEEEccCCcCCCccchhccCCCC--CCeEeeecccCCC
Q 002158 294 PSKKLSENVTTIDLSDNYLNGSILESISNLPF--LQTLSLENNFLTG 338 (958)
Q Consensus 294 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~~ 338 (958)
...+++|+.|+|++|+|+...+..|..++. |+.|+|++|++..
T Consensus 159 --~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 159 --GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp -----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred --cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 012345555555555555555666676766 3778888887763
No 366
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.74 E-value=5e-20 Score=221.67 Aligned_cols=295 Identities=13% Similarity=0.060 Sum_probs=177.2
Q ss_pred eeEEEEccCCc-CCC-CccccccCCCCcceeeccCccc-CC----CCccccCCCCCcEEEeeCCCCCC----CCChhhcC
Q 002158 87 HVRELQLLSMN-LSG-NLAPELGQLSRLQYYFMWNDLT-GT----IPKEIGNISSLIFLLLNGNKLSG----SLPDELGY 155 (958)
Q Consensus 87 ~v~~L~L~~~~-l~~-~~~~~l~~L~~L~~L~l~n~~~-~~----ip~~i~~l~~L~~L~Ls~n~l~~----~~p~~l~~ 155 (958)
++++|+|.++. ++. .++.....+++|+.|+++++.. +. ++..+.++++|++|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 221 1233345789999999986643 22 34456778999999999999983 34445678
Q ss_pred CCCCCEEecccccccccCccccccccccceEeccccccc--------------------------ccCchhhcCCccchh
Q 002158 156 LSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIG--------------------------GQIPSELSKLSTLIH 209 (958)
Q Consensus 156 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--------------------------~~~p~~l~~l~~L~~ 209 (958)
+++|++|+|++|.+.+ ++..+..+++|+.|+++++... +.+|..+..+++|++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRK 297 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCE
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcE
Confidence 9999999999999985 6778888889999988753322 122333344445555
Q ss_pred hhccCCccccCCC-cccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEccc-----------CCCCCCCC-C-CCC
Q 002158 210 LLVDNNNLSGNLP-PELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRN-----------CNLQGAVP-D-LSR 275 (958)
Q Consensus 210 L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~-----------N~l~~~~~-~-l~~ 275 (958)
|+|++|.+++... ..+..+++|++|+++ |.+....++..+..+++|++|+|++ |.+++... . ...
T Consensus 298 L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 298 LDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 5555555432221 223445555555555 3332222333334455566666652 33332211 1 233
Q ss_pred CCCcCEEeccCCcCCCcCCCC-C-CCCCcCEEEcc----CCcCCCc-----cchhccCCCCCCeEeeecc--cCCCccch
Q 002158 276 IPNLYYLDLSWNHLTGSIPSK-K-LSENVTTIDLS----DNYLNGS-----ILESISNLPFLQTLSLENN--FLTGSIPA 342 (958)
Q Consensus 276 l~~L~~L~Ls~N~l~~~~~~~-~-~~~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~L~L~~N--~l~~~ip~ 342 (958)
+++|++|+++.|.+++..... . .+++|+.|+|+ .|.+++. ++..+.++++|+.|+|++| .+++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 566666666666665422211 1 24566777774 5566653 3333556677777777643 35555544
Q ss_pred hhhcccccCccccceEeccCCCCCCC--ccC-CCCCCcceEEeCCCCC
Q 002158 343 TIWQNKSFSTKARLKIDLRNNSFSNI--VGD-LTLPNNVTLRLGGNPI 387 (958)
Q Consensus 343 ~l~~~~~~~~~~l~~L~Ls~N~l~~l--~~~-~~l~~L~~L~l~~N~l 387 (958)
.+.. ..+.|+.|+|++|++++. +.. ..+++|+.|++++|++
T Consensus 457 ~~~~----~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 457 YIGQ----YSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp HHHH----SCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred HHHH----hCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 4432 134577888988888762 222 2678899999999886
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1e-17 Score=171.02 Aligned_cols=154 Identities=17% Similarity=0.289 Sum_probs=108.7
Q ss_pred ccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccch
Q 002158 129 IGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLI 208 (958)
Q Consensus 129 i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 208 (958)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|.+++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356777888888888887 566 5777888888888888665 234677777888888888887766667777777777
Q ss_pred hhhccCCccccCCCcccCCCCCccEEEccCCC-CCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCC
Q 002158 209 HLLVDNNNLSGNLPPELSELPQLCILQLDNNN-FSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWN 287 (958)
Q Consensus 209 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N 287 (958)
+|++++|++++..+..+..+++|++|+|++|+ ++ .++ .+..+++|+.|++++|++++.. .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~--~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT--DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC--CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc--ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCc
Confidence 77777777776666777777777777777776 54 333 5666777777777777776543 5666666777777776
Q ss_pred cCC
Q 002158 288 HLT 290 (958)
Q Consensus 288 ~l~ 290 (958)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 664
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=2.9e-20 Score=220.28 Aligned_cols=204 Identities=18% Similarity=0.141 Sum_probs=157.3
Q ss_pred ccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCC-------------CCCCCChhhcCCCCCCEEe-cccccccc
Q 002158 106 LGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNK-------------LSGSLPDELGYLSNLNRLQ-VDENNITG 171 (958)
Q Consensus 106 l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~-------------l~~~~p~~l~~l~~L~~L~-L~~N~l~~ 171 (958)
+..+++|+.|++++|....+|+.|+++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 345 ~~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 345 SATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp CSTTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred cccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 367899999999999888999999999999999997775 6678888899999999999 777754
Q ss_pred cCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCcccccc
Q 002158 172 TIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYG 251 (958)
Q Consensus 172 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~ 251 (958)
.+|+.+.+++|.|+.. +. ..|+.|+|++|+|++ +|. +..+++|+.|+|++|+|+ .+|..++
T Consensus 423 ---------~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~--~lp~~~~ 483 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR--ALPPALA 483 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC--CCCGGGG
T ss_pred ---------chhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc--ccchhhh
Confidence 3566677777777632 22 247778888888875 454 777888888888888886 5677888
Q ss_pred CCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcC-C-CCCCCCCcCEEEccCCcCCCccch---hccCCCCC
Q 002158 252 NFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSI-P-SKKLSENVTTIDLSDNYLNGSILE---SISNLPFL 326 (958)
Q Consensus 252 ~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~-~-~~~~~~~L~~L~Ls~N~l~~~~~~---~~~~l~~L 326 (958)
++++|+.|+|++|+|++++ .+..+++|+.|+|++|+|++.. | ....+++|+.|+|++|.|++.++. .+..+++|
T Consensus 484 ~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 484 ALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp GCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred cCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 8888888888888888754 7778888888888888887663 3 345568888888888888776543 24457888
Q ss_pred CeEee
Q 002158 327 QTLSL 331 (958)
Q Consensus 327 ~~L~L 331 (958)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 88864
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=4.1e-18 Score=182.33 Aligned_cols=169 Identities=22% Similarity=0.373 Sum_probs=109.4
Q ss_pred CCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEec
Q 002158 109 LSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHL 188 (958)
Q Consensus 109 L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 188 (958)
+.++..+.+.++....++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +..+++|++|+|
T Consensus 18 l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 344445555555555554 4666777777777777776 455 56777777777777777774433 777777777777
Q ss_pred ccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCC
Q 002158 189 NNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQG 268 (958)
Q Consensus 189 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~ 268 (958)
++|++++ +|. +.. ++|+.|+|++|++++. ..+..+++|+.|+|++|+++. ++ .+..+++|+.|+|++|++++
T Consensus 93 ~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~--~~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 93 NRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS--IV-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB--CG-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC--Ch-HHccCCCCCEEECCCCcCcc
Confidence 7777774 333 222 6777777777777653 346677777777777777753 23 56666777777777777766
Q ss_pred CCCCCCCCCCcCEEeccCCcCCC
Q 002158 269 AVPDLSRIPNLYYLDLSWNHLTG 291 (958)
Q Consensus 269 ~~~~l~~l~~L~~L~Ls~N~l~~ 291 (958)
. ..+..+++|+.|+|++|.+++
T Consensus 165 ~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 165 T-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp C-TTSTTCCCCCEEEEEEEEEEC
T ss_pred h-HHhccCCCCCEEeCCCCcccC
Confidence 5 456666777777777776653
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=5.1e-18 Score=181.58 Aligned_cols=170 Identities=21% Similarity=0.305 Sum_probs=94.3
Q ss_pred CCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhh
Q 002158 132 ISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLL 211 (958)
Q Consensus 132 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 211 (958)
+.++..+++++|.++ .++ .+..+++|++|++++|+++ .++ .+..+++|+.|+|++|+|+
T Consensus 18 l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~----------------- 76 (263)
T 1xeu_A 18 LANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS----------------- 76 (263)
T ss_dssp HHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-----------------
T ss_pred HHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccC-----------------
Confidence 334445555555554 222 3444555555555555554 222 3444455555555555544
Q ss_pred ccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCC
Q 002158 212 VDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTG 291 (958)
Q Consensus 212 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~ 291 (958)
+..+ +..+++|++|+|++|+++. ++.... ++|+.|+|++|++++. +.+..+++|+.|+|++|++++
T Consensus 77 -------~~~~--l~~l~~L~~L~L~~N~l~~--l~~~~~--~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 77 -------DLSP--LKDLTKLEELSVNRNRLKN--LNGIPS--ACLSRLFLDNNELRDT-DSLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp -------CCGG--GTTCSSCCEEECCSSCCSC--CTTCCC--SSCCEEECCSSCCSBS-GGGTTCTTCCEEECTTSCCCB
T ss_pred -------CChh--hccCCCCCEEECCCCccCC--cCcccc--CcccEEEccCCccCCC-hhhcCcccccEEECCCCcCCC
Confidence 3222 4444555555555555532 222111 5555555655555543 245666666666666666663
Q ss_pred cCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCc
Q 002158 292 SIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGS 339 (958)
Q Consensus 292 ~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 339 (958)
++....+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 143 -~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 143 -IVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -CGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -ChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 34445556777777777777665 6678888888888888888743
No 371
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=3.5e-17 Score=166.31 Aligned_cols=155 Identities=21% Similarity=0.249 Sum_probs=98.4
Q ss_pred cEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEccCC
Q 002158 232 CILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLSDN 310 (958)
Q Consensus 232 ~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls~N 310 (958)
+.+++++|.++ .+|..+. ++|+.|+|++|+|+.++..|..+++|+.|+|++|.|++..+. ...+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~--~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK--VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS--SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC--cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45677777764 3454332 456666666666665544466666666666666666643332 233455666666666
Q ss_pred cCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCC
Q 002158 311 YLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPIC 388 (958)
Q Consensus 311 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~ 388 (958)
+|++..+..|.++++|+.|+|++|+|+ .++... .+++|+.|+|++|||
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~-----------------------------~~~~~~~~~l~~L~~L~L~~N~~- 138 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDIS-----------------------------VVPEGAFNDLSALSHLAIGANPL- 138 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCC-----------------------------BCCTTTTTTCTTCCEEECCSSCE-
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCC-----------------------------eeChhhhhcCccccEEEeCCCCe-
Confidence 665555555555555555555555555 443322 567788888888777
Q ss_pred CCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCCCceeeeeceee
Q 002158 389 TSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPEPCFCAAPLRIG 447 (958)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~~~~c~sp~~~~ 447 (958)
.|+|...++..|+...........|++|...+
T Consensus 139 ---------------------------~C~c~l~~l~~~~~~~~~~~~~~~C~~P~~l~ 170 (193)
T 2wfh_A 139 ---------------------------YCDCNMQWLSDWVKSEYKEPGIARCAGPGEMA 170 (193)
T ss_dssp ---------------------------ECSGGGHHHHHHHHHSSCCCSCCBEEESGGGT
T ss_pred ---------------------------ecCCcCHHHHHHHHhccCCCCCcCcCCchHHC
Confidence 78888888999998776666668999998765
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=2.8e-17 Score=167.77 Aligned_cols=154 Identities=19% Similarity=0.284 Sum_probs=129.3
Q ss_pred cCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceE
Q 002158 107 GQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHL 186 (958)
Q Consensus 107 ~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 186 (958)
+.+++|+.|+++++....+| .+..+++|++|++++|.++ .+ ..+..+++|++|++++|++++..+..+..+++|++|
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 56778888888877777777 6889999999999999776 33 478899999999999999998788889999999999
Q ss_pred ecccccccccCchhhcCCccchhhhccCCc-cccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCC
Q 002158 187 HLNNNSIGGQIPSELSKLSTLIHLLVDNNN-LSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCN 265 (958)
Q Consensus 187 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~ 265 (958)
+|++|.+++..+..+..+++|++|++++|+ ++ .++ .+..+++|++|++++|+++. ++ .+..+++|+.|++++|+
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~--~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD--YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC--CT-TGGGCSSCCEEEECBC-
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC--hH-HhccCCCCCEEEeeCcc
Confidence 999999998788889999999999999998 65 444 68899999999999999974 34 78889999999999999
Q ss_pred CCC
Q 002158 266 LQG 268 (958)
Q Consensus 266 l~~ 268 (958)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 373
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.67 E-value=4.2e-19 Score=213.63 Aligned_cols=244 Identities=15% Similarity=0.126 Sum_probs=144.5
Q ss_pred eeEEEEccCCcCCCCcccccc-CCCCcceeeccCc-ccCC--CCccccCCCCCcEEEeeCCCCCCCCChhhc----CCCC
Q 002158 87 HVRELQLLSMNLSGNLAPELG-QLSRLQYYFMWND-LTGT--IPKEIGNISSLIFLLLNGNKLSGSLPDELG----YLSN 158 (958)
Q Consensus 87 ~v~~L~L~~~~l~~~~~~~l~-~L~~L~~L~l~n~-~~~~--ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~----~l~~ 158 (958)
++++|+|+++.+++..+..+. .+++|+.|.++++ ..+. ++..+.++++|++|+|++|.+++..+..+. .+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 688899999988887777775 6889999988765 3333 445556788999999999988765555444 5668
Q ss_pred CCEEeccccc--cccc-CccccccccccceEecccc-cccccCchhhcCCccchhhhccCCc------------------
Q 002158 159 LNRLQVDENN--ITGT-IPKSFANLSRVRHLHLNNN-SIGGQIPSELSKLSTLIHLLVDNNN------------------ 216 (958)
Q Consensus 159 L~~L~L~~N~--l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~L~~N~------------------ 216 (958)
|++|++++|. ++.. +...+.++++|++|+|++| .+. .++..+..+++|+.|+++.+.
T Consensus 186 L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~ 264 (594)
T 2p1m_B 186 LVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGC 264 (594)
T ss_dssp CCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTC
T ss_pred CcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcC
Confidence 9999999886 3211 2222345688888888888 333 355666666666666644331
Q ss_pred --------ccc----CCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCC-CC-CCCCCCcCEE
Q 002158 217 --------LSG----NLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAV-PD-LSRIPNLYYL 282 (958)
Q Consensus 217 --------l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~-l~~l~~L~~L 282 (958)
+.. .++..+..+++|++|+|++|.++...+...+.++++|+.|++++| ++... .. ...+++|+.|
T Consensus 265 ~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L 343 (594)
T 2p1m_B 265 KELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLREL 343 (594)
T ss_dssp TTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEE
T ss_pred CCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEE
Confidence 111 122222356788888888887654333444567777777777776 32111 11 1235566666
Q ss_pred eccC---------CcCCCcCC-CC-CCCCCcCEEEccCCcCCCccchhcc-CCCCCCeEeee
Q 002158 283 DLSW---------NHLTGSIP-SK-KLSENVTTIDLSDNYLNGSILESIS-NLPFLQTLSLE 332 (958)
Q Consensus 283 ~Ls~---------N~l~~~~~-~~-~~~~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~ 332 (958)
+|++ |.+++... .. ..+++|+.|+++.|.+++.....+. .+++|+.|+|+
T Consensus 344 ~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 344 RVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp EEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred EEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 6632 23321100 00 1134555555555555544444443 35555555555
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=1e-16 Score=162.73 Aligned_cols=157 Identities=23% Similarity=0.358 Sum_probs=106.5
Q ss_pred cEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC--CCCCCCcCEEeccCCcCCCcCCC-CCCCCCcCEEEcc
Q 002158 232 CILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD--LSRIPNLYYLDLSWNHLTGSIPS-KKLSENVTTIDLS 308 (958)
Q Consensus 232 ~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~--l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~L~~L~Ls 308 (958)
+.|++++|.++ .+|..+.. +|+.|+|++|++++.++. +..+++|++|+|++|+|++..|. ...+++|++|+|+
T Consensus 11 ~~l~~s~~~l~--~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK--EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS--SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC--cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 57777877774 45654432 777777777777776653 66777777777777777765443 3445677777777
Q ss_pred CCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCCCCCCcceEEeCCCCCC
Q 002158 309 DNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDLTLPNNVTLRLGGNPIC 388 (958)
Q Consensus 309 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~~l~~L~~L~l~~N~l~ 388 (958)
+|+|++..+..|.++++|++|+|++|+|++..|..+. .+++|+.|+|++|+|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------------~l~~L~~L~L~~N~l- 138 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE---------------------------HLNSLTSLNLASNPF- 138 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSST---------------------------TCTTCCEEECTTCCB-
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhh---------------------------cCCCCCEEEeCCCCc-
Confidence 7777776666677777777777777777654444331 567788888888887
Q ss_pred CCCCCCCCCcccccCCCCCccccccCCCCCCCCCCCCCcccccCCCCCCceeeeeceee
Q 002158 389 TSANIPNTGRFCGSDAGGDETLTNSKVNCPVQACPVDNFFEYVPASPEPCFCAAPLRIG 447 (958)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~~~~~~c~sp~~~~ 447 (958)
.|+|+..++..|++..........|++|...+
T Consensus 139 ---------------------------~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l~ 170 (192)
T 1w8a_A 139 ---------------------------NCNCHLAWFAEWLRKKSLNGGAARCGAPSKVR 170 (192)
T ss_dssp ---------------------------CCSGGGHHHHHHHHHHCCSGGGCBBCSSTTTT
T ss_pred ---------------------------cCcCcchHHHHHHHHcCCCCCCCCCCCChHHc
Confidence 56777777777776665555556788886654
No 375
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.67 E-value=1.1e-18 Score=209.90 Aligned_cols=294 Identities=15% Similarity=0.123 Sum_probs=141.9
Q ss_pred eeeEEEEccCC-cCCCC-ccccccCCCCcceeeccCccc-CCCC----ccccCCCCCcEEEeeCCCCCCCCC-hh----h
Q 002158 86 LHVRELQLLSM-NLSGN-LAPELGQLSRLQYYFMWNDLT-GTIP----KEIGNISSLIFLLLNGNKLSGSLP-DE----L 153 (958)
Q Consensus 86 ~~v~~L~L~~~-~l~~~-~~~~l~~L~~L~~L~l~n~~~-~~ip----~~i~~l~~L~~L~Ls~n~l~~~~p-~~----l 153 (958)
.+++.|+|.+| .++.. ++..+.++++|+.|+++++.. +..+ .....+++|++|+|++|. . .+. .. +
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~-~~~~~~l~~l~ 207 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-S-EVSFSALERLV 207 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-S-CCCHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-C-cCCHHHHHHHH
Confidence 36788888877 44433 334445688888888875542 2222 223356678888888776 1 222 22 2
Q ss_pred cCCCCCCEEecccc-cccccCccccccccccceEeccccc--------------------------cc----ccCchhhc
Q 002158 154 GYLSNLNRLQVDEN-NITGTIPKSFANLSRVRHLHLNNNS--------------------------IG----GQIPSELS 202 (958)
Q Consensus 154 ~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~--------------------------l~----~~~p~~l~ 202 (958)
.++++|++|+|++| .+++ ++..+..+++|+.|+++.+. +. +.++..+.
T Consensus 208 ~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~ 286 (594)
T 2p1m_B 208 TRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYS 286 (594)
T ss_dssp HHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHH
T ss_pred HhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHH
Confidence 34577788877776 2222 34444444444444432221 00 01122222
Q ss_pred CCccchhhhccCCccccCC-CcccCCCCCccEEEccCC---------------------------------CCCCCCccc
Q 002158 203 KLSTLIHLLVDNNNLSGNL-PPELSELPQLCILQLDNN---------------------------------NFSASEIPA 248 (958)
Q Consensus 203 ~l~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~~N---------------------------------~l~~~~~p~ 248 (958)
.+++|+.|+|++|.+++.. ...+..+++|++|++++| .++...+..
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCccCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 3344555555555443211 111334444444444444 332111111
Q ss_pred cccCCCCCCEEEcccCCCCCCCCC-C-CCCCCcCEEecc--C----CcCCCcCCC------CCCCCCcCEEEccCCcCCC
Q 002158 249 TYGNFSKLVKLSLRNCNLQGAVPD-L-SRIPNLYYLDLS--W----NHLTGSIPS------KKLSENVTTIDLSDNYLNG 314 (958)
Q Consensus 249 ~~~~l~~L~~L~L~~N~l~~~~~~-l-~~l~~L~~L~Ls--~----N~l~~~~~~------~~~~~~L~~L~Ls~N~l~~ 314 (958)
...++++|+.|.+..|.+++.... + ..+++|+.|+|+ + |.+++.... ...+++|+.|+|++ .+++
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 112345555555555555433221 2 235566666666 2 334311100 12235666666655 5555
Q ss_pred ccchhccC-CCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCcc--CC-CCCCcceEEeCCCCC
Q 002158 315 SILESISN-LPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVG--DL-TLPNNVTLRLGGNPI 387 (958)
Q Consensus 315 ~~~~~~~~-l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~--~~-~l~~L~~L~l~~N~l 387 (958)
..+..+.. +++|+.|+|++|.+++..+..+... .+.|+.|+|++|.+++... .. .+++|+.|++++|++
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~----~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSG----CDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHH----CTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhc----CCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 44444444 6666666666666655444333211 2345566666666643221 11 456666666666665
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.66 E-value=1.8e-17 Score=202.48 Aligned_cols=178 Identities=21% Similarity=0.175 Sum_probs=92.8
Q ss_pred CCcEEEeeCCCCCCCCChhhcCCCCCC-----EEecccccccccCccccccccccceEecccccccccCchhhcCCccch
Q 002158 134 SLIFLLLNGNKLSGSLPDELGYLSNLN-----RLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLI 208 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~-----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 208 (958)
.++.|+|.+|.+.. .+..+.....|. .++++.|++. ..+..|..+++|+.|+|++|.+. .+|..+.++++|+
T Consensus 174 ~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 174 LTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLT 250 (727)
T ss_dssp --------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCS
T ss_pred ccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCC
Confidence 45566666666653 333222222222 2233344444 45667777888888888888887 6666666778888
Q ss_pred hhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCc
Q 002158 209 HLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNH 288 (958)
Q Consensus 209 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~ 288 (958)
+|+|++|+|+ .+|..|..+++|++|+|++|+|+ .+|..|+++++|+.|+|++|.|+.++..|..+++|+.|+|++|.
T Consensus 251 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 251 RLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT--SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp CCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS--SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSC
T ss_pred EEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC--ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCc
Confidence 8888888887 66777777888888888888875 56777777777777777777777665567777777777777777
Q ss_pred CCCcCCCCCCC--CCcCEEEccCCcCCCccc
Q 002158 289 LTGSIPSKKLS--ENVTTIDLSDNYLNGSIL 317 (958)
Q Consensus 289 l~~~~~~~~~~--~~L~~L~Ls~N~l~~~~~ 317 (958)
|++.+|..... ..+..|+|++|.+++.+|
T Consensus 328 l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 328 LEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred cCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 76555443221 111224455555554443
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=3e-16 Score=159.29 Aligned_cols=109 Identities=30% Similarity=0.420 Sum_probs=71.2
Q ss_pred CCcEEEeeCCCCCCCCCh-hhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhc
Q 002158 134 SLIFLLLNGNKLSGSLPD-ELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLV 212 (958)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 212 (958)
+|++|+|++|.+++..+. .+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 666777777777644443 3666677777777777776666666666666777777777666666656666666666666
Q ss_pred cCCccccCCCcccCCCCCccEEEccCCCCC
Q 002158 213 DNNNLSGNLPPELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 213 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 242 (958)
++|+|++..|..|..+++|++|+|++|.++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 666666666666666666666666666654
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.5e-15 Score=151.94 Aligned_cols=110 Identities=25% Similarity=0.298 Sum_probs=78.8
Q ss_pred CCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhc
Q 002158 133 SSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLV 212 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 212 (958)
++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 46777888888887655556677778888888888777665666677777777777777777665556677777777777
Q ss_pred cCCccccCCCcccCCCCCccEEEccCCCCC
Q 002158 213 DNNNLSGNLPPELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 213 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 242 (958)
++|++++..+..+..+++|++|+|++|.++
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 777777655555666677777777777665
No 379
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=2.1e-16 Score=174.85 Aligned_cols=135 Identities=16% Similarity=0.188 Sum_probs=100.4
Q ss_pred cCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCCh--------------hcHH--------HHHHHHHHHHccCCCC
Q 002158 625 AYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSL--------------QGQN--------EFLTEIKLLSRLHHRN 682 (958)
Q Consensus 625 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~H~n 682 (958)
.-|.+..+||+|+||.||+|...+|+.||||+++.... .... ...+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34788899999999999999998999999998753210 0001 1235677777775544
Q ss_pred cc--eEEEEEEeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEec
Q 002158 683 LV--SLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLD 760 (958)
Q Consensus 683 iv--~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~ 760 (958)
+. ..+++ . ..+|||||++|++|.++... +....++.|++.+|.|||+.| ||||||||.|||++
T Consensus 175 v~vp~p~~~--~--~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQ--S--RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEE--E--TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE
T ss_pred CCCCeeeec--c--CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEe
Confidence 32 23322 1 23799999999888765431 123568899999999999999 99999999999998
Q ss_pred CCCC----------eEEeeeeeec
Q 002158 761 SNLN----------AKVADFGLSR 774 (958)
Q Consensus 761 ~~~~----------~kl~DFGla~ 774 (958)
+++. +.|+||+-+.
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCE
T ss_pred CCCCcccccccccceEEEEeCCcc
Confidence 8763 8999999664
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=1e-15 Score=151.84 Aligned_cols=132 Identities=22% Similarity=0.290 Sum_probs=64.8
Q ss_pred CCCcEEEeeCCCCC-CCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhh
Q 002158 133 SSLIFLLLNGNKLS-GSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLL 211 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 211 (958)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--------- 92 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAE--------- 92 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHH---------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHh---------
Confidence 44555555555554 44444445555555555555555433 4444445555555555554443444444
Q ss_pred ccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCC----CCCCCCCcCEEeccCC
Q 002158 212 VDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVP----DLSRIPNLYYLDLSWN 287 (958)
Q Consensus 212 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~----~l~~l~~L~~L~Ls~N 287 (958)
.+++|++|+|++|+++....+..+..+++|+.|+|++|.+++.++ .+..+++|++|++++|
T Consensus 93 ---------------~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 93 ---------------KLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp ---------------HCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred ---------------hCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 444444444444444321112344455555555555555554444 2455555555555555
Q ss_pred cCC
Q 002158 288 HLT 290 (958)
Q Consensus 288 ~l~ 290 (958)
.+.
T Consensus 158 ~~~ 160 (168)
T 2ell_A 158 EDQ 160 (168)
T ss_dssp TSC
T ss_pred Chh
Confidence 554
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=1.2e-15 Score=151.23 Aligned_cols=134 Identities=23% Similarity=0.215 Sum_probs=114.5
Q ss_pred cCCCCcceeeccCcccC--CCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccc
Q 002158 107 GQLSRLQYYFMWNDLTG--TIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVR 184 (958)
Q Consensus 107 ~~L~~L~~L~l~n~~~~--~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 184 (958)
...++|+.|++++|... .+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34588999999877665 8999999999999999999999965 7799999999999999999988888888899999
Q ss_pred eEecccccccccC-chhhcCCccchhhhccCCccccCCC---cccCCCCCccEEEccCCCCC
Q 002158 185 HLHLNNNSIGGQI-PSELSKLSTLIHLLVDNNNLSGNLP---PELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 185 ~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~ 242 (958)
+|+|++|.|++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 9999999999532 2678888888888888888886555 47778888888888888774
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=6.5e-15 Score=149.46 Aligned_cols=109 Identities=24% Similarity=0.363 Sum_probs=73.2
Q ss_pred CCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhc
Q 002158 133 SSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLV 212 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 212 (958)
++|++|+|++|.++ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 35677777777776 56666777777777777777777666666667777777777777776665666666666666666
Q ss_pred cCCccccCCCcccCCCCCccEEEccCCCCC
Q 002158 213 DNNNLSGNLPPELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 213 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 242 (958)
++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666666555555666666666666666654
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.54 E-value=1.5e-15 Score=147.34 Aligned_cols=108 Identities=22% Similarity=0.302 Sum_probs=62.9
Q ss_pred CCCcEEEeeCCCCC-CCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhh
Q 002158 133 SSLIFLLLNGNKLS-GSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLL 211 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 211 (958)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666666 55666666666666666666666644 5566666666666666666654555555555555555
Q ss_pred ccCCccccC-CCcccCCCCCccEEEccCCCCC
Q 002158 212 VDNNNLSGN-LPPELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 212 L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~ 242 (958)
+++|++++. .+..+..+++|++|++++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 555555532 1244455555555555555543
No 384
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=4.9e-15 Score=164.02 Aligned_cols=90 Identities=14% Similarity=0.203 Sum_probs=72.2
Q ss_pred CCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcCCCC--CCCCCcC-EEEccCCcCCCccchhccCCCCCCe
Q 002158 253 FSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSIPSK--KLSENVT-TIDLSDNYLNGSILESISNLPFLQT 328 (958)
Q Consensus 253 l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~--~~~~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~ 328 (958)
+++|+.|+|++|+++.++.. |.++++|+.|+|.+| ++ .++.. ..+.+|+ .|+|.+ .++.+.+.+|.++++|+.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 68899999999988887774 888999999999988 65 45544 3457898 999988 788888899999999999
Q ss_pred EeeecccCCCccchhhhc
Q 002158 329 LSLENNFLTGSIPATIWQ 346 (958)
Q Consensus 329 L~L~~N~l~~~ip~~l~~ 346 (958)
|++++|.++ .++...|.
T Consensus 302 l~l~~n~i~-~I~~~aF~ 318 (329)
T 3sb4_A 302 VLATGDKIT-TLGDELFG 318 (329)
T ss_dssp EEECSSCCC-EECTTTTC
T ss_pred EEeCCCccC-ccchhhhc
Confidence 999999998 55554443
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.52 E-value=4.4e-14 Score=141.20 Aligned_cols=132 Identities=23% Similarity=0.310 Sum_probs=74.2
Q ss_pred CcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccC
Q 002158 135 LIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDN 214 (958)
Q Consensus 135 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 214 (958)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 456677777766 4554332 4666666666666654444555556666666666655544444444444444444444
Q ss_pred CccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCCCC-CCCCCCcCEEeccCCcCCCcC
Q 002158 215 NNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAVPD-LSRIPNLYYLDLSWNHLTGSI 293 (958)
Q Consensus 215 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~ 293 (958)
|+|++..+. .+..+++|+.|+|++|++++.++. +..+++|++|+|++|.+.+..
T Consensus 86 N~l~~~~~~-------------------------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNG-------------------------VFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTT-------------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHH-------------------------HhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 444443333 345555555555555555555554 456677777777777766544
Q ss_pred C
Q 002158 294 P 294 (958)
Q Consensus 294 ~ 294 (958)
+
T Consensus 141 ~ 141 (177)
T 2o6r_A 141 P 141 (177)
T ss_dssp H
T ss_pred c
Confidence 3
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=5.1e-15 Score=163.89 Aligned_cols=259 Identities=15% Similarity=0.108 Sum_probs=168.6
Q ss_pred CCCcceeeccCcccCCCCccccC-CCCCcEEEeeCCCCC--CCCChhhcCCCCCCEEecccccccccCcccccc------
Q 002158 109 LSRLQYYFMWNDLTGTIPKEIGN-ISSLIFLLLNGNKLS--GSLPDELGYLSNLNRLQVDENNITGTIPKSFAN------ 179 (958)
Q Consensus 109 L~~L~~L~l~n~~~~~ip~~i~~-l~~L~~L~Ls~n~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~------ 179 (958)
+.+|+.|.+.+++...--..+.. +++|++|||++|++. ...+. .++.++.+.+..|.|. ...|.+
T Consensus 24 ~~~l~~L~l~g~i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~---~~aF~~~~~~~~ 97 (329)
T 3sb4_A 24 ANSITHLTLTGKLNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP---AYAFSNVVNGVT 97 (329)
T ss_dssp HHHCSEEEEEEEECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---TTTTEEEETTEE
T ss_pred hCceeEEEEeccccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---HHHhcccccccc
Confidence 56677776665443222223333 778888888888887 11111 1222444555555332 345556
Q ss_pred --ccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCC--CC-CCccccccCCC
Q 002158 180 --LSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNF--SA-SEIPATYGNFS 254 (958)
Q Consensus 180 --l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l--~~-~~~p~~~~~l~ 254 (958)
+++|+.|+|.+ .++...+.+|.++++|+.|++.+|.+..+.+.+|.++.++..+.+..+.. .. ..-...|.++.
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 78888888887 77766667788888888888888887777777787777777776655221 00 01122344444
Q ss_pred CCC--------------------------EEEcccCCCCCCCCCC-CCCCCcCEEeccCCcCCCcCCCC--CCCCCcCEE
Q 002158 255 KLV--------------------------KLSLRNCNLQGAVPDL-SRIPNLYYLDLSWNHLTGSIPSK--KLSENVTTI 305 (958)
Q Consensus 255 ~L~--------------------------~L~L~~N~l~~~~~~l-~~l~~L~~L~Ls~N~l~~~~~~~--~~~~~L~~L 305 (958)
.|+ .+.+.++-.......+ ..+++|+.|+|++|+++ .++.. ..+.+|+.|
T Consensus 177 ~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 177 PLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKI 255 (329)
T ss_dssp CCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEE
T ss_pred ccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEE
Confidence 444 3333222100000001 13789999999999998 55554 445899999
Q ss_pred EccCCcCCCccchhccCCCCCC-eEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEe
Q 002158 306 DLSDNYLNGSILESISNLPFLQ-TLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRL 382 (958)
Q Consensus 306 ~Ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l 382 (958)
+|.+| ++.+...+|.++++|+ .|+|.+ .++ .|+...|.. ...|+.|+++.|+++.++... ++++|+.|+.
T Consensus 256 ~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~----c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 256 KLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMG----CDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTT----CTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhC----CccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 99998 8889999999999999 999999 777 555544432 346779999999999999876 8889998875
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.51 E-value=2e-14 Score=139.35 Aligned_cols=112 Identities=23% Similarity=0.254 Sum_probs=55.2
Q ss_pred CCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEeccccccccc-Cchhhc
Q 002158 124 TIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQ-IPSELS 202 (958)
Q Consensus 124 ~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~ 202 (958)
.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|++++|.+++. .+..+.
T Consensus 33 ~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~ 110 (149)
T 2je0_A 33 KLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLK 110 (149)
T ss_dssp BCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGG
T ss_pred HHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHh
Confidence 3444444445555555555555433 3444555555555555555544444444455555555555555532 224455
Q ss_pred CCccchhhhccCCccccCCC---cccCCCCCccEEEcc
Q 002158 203 KLSTLIHLLVDNNNLSGNLP---PELSELPQLCILQLD 237 (958)
Q Consensus 203 ~l~~L~~L~L~~N~l~~~~~---~~l~~l~~L~~L~L~ 237 (958)
.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 111 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 111 KLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp GCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred hCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 55555555555555554433 345555555555554
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.46 E-value=1.8e-12 Score=146.83 Aligned_cols=261 Identities=11% Similarity=0.123 Sum_probs=192.5
Q ss_pred CCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEec
Q 002158 109 LSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHL 188 (958)
Q Consensus 109 L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 188 (958)
...++.+.+.++....-..+|.+. +|+.+.|..| ++..-..+|.+ .+|+.+.|.+ .++.+....|.++++|+.++|
T Consensus 112 ~~~l~~i~ip~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 112 LKGYNEIILPNSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp CSSCSEEECCTTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred cCCccEEEECCccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 356667777666665555667775 7999998876 66455566777 4799999986 677677788999999999999
Q ss_pred ccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCC
Q 002158 189 NNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQG 268 (958)
Q Consensus 189 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~ 268 (958)
++|+++.....+|. ..+|+.+.|.++ ++.+...+|.++++|+.++|.+| ++ ..-...|.+ .+|+.+.| .+.++.
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc-CCccEEEe-CCCccE
Confidence 99999966566666 589999999854 77777889999999999999875 43 122446666 78999999 456776
Q ss_pred CCC-CCCCCCCcCEEeccCCcCCC----cCCCC--CCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccc
Q 002158 269 AVP-DLSRIPNLYYLDLSWNHLTG----SIPSK--KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIP 341 (958)
Q Consensus 269 ~~~-~l~~l~~L~~L~Ls~N~l~~----~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip 341 (958)
+.. .|.++++|+.+++.+|.+.. .++.. ..+.+|+.++|. |.++.+...+|.++++|+.|.|..| ++ .|+
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~ 338 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QIN 338 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EEC
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEc
Confidence 665 48999999999999887751 23333 445789999998 5588888889999999999999655 55 455
Q ss_pred hhhhcccccCccccceEeccCCCCCCCccCC--CCC-CcceEEeCCCCC
Q 002158 342 ATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLP-NNVTLRLGGNPI 387 (958)
Q Consensus 342 ~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~-~L~~L~l~~N~l 387 (958)
...|.. ..|+.|++++|.+..+.... +++ +++.|++..|.+
T Consensus 339 ~~aF~~-----~~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 339 FSAFNN-----TGIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTSSSS-----SCCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred HHhCCC-----CCCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 544432 25668888888888876654 443 567777766654
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=4.6e-14 Score=140.95 Aligned_cols=109 Identities=27% Similarity=0.300 Sum_probs=62.9
Q ss_pred ccCCCCCcEEEeeCCCCCCCCChhhcCCC-CCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccc
Q 002158 129 IGNISSLIFLLLNGNKLSGSLPDELGYLS-NLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTL 207 (958)
Q Consensus 129 i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 207 (958)
+.++.+|++|+|++|.++ .+|. +..+. +|++|+|++|++++. ..|..+++|++|+|++|.|++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455667777777777776 3443 44333 677777777776643 456666666666666666664443444555555
Q ss_pred hhhhccCCccccCCCc--ccCCCCCccEEEccCCCCC
Q 002158 208 IHLLVDNNNLSGNLPP--ELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 208 ~~L~L~~N~l~~~~~~--~l~~l~~L~~L~L~~N~l~ 242 (958)
++|+|++|+|+. +|. .+..+++|+.|++++|.++
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC
Confidence 555555555542 232 4445555555555555553
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=2.3e-16 Score=161.09 Aligned_cols=132 Identities=25% Similarity=0.312 Sum_probs=72.8
Q ss_pred CCCcEEEeeCCCCCCCCCh------hhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCcc
Q 002158 133 SSLIFLLLNGNKLSGSLPD------ELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLST 206 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 206 (958)
..++.++++.+.++|.+|. .+..+++|++|+|++|++++ +| .+.++++|++|+|++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444444444444444443 56666666666666666664 44 5666666666666666666 45555555566
Q ss_pred chhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCC
Q 002158 207 LIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGA 269 (958)
Q Consensus 207 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~ 269 (958)
|+.|+|++|++++ +| .+..+++|++|+|++|+++.......+..+++|+.|++++|.+++.
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 6666666666654 22 4555556666666666654211112455555555555555555444
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.42 E-value=9.1e-14 Score=138.79 Aligned_cols=134 Identities=19% Similarity=0.206 Sum_probs=101.8
Q ss_pred ccccCCCCcceeeccCcccCCCCccccCCC-CCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccc
Q 002158 104 PELGQLSRLQYYFMWNDLTGTIPKEIGNIS-SLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSR 182 (958)
Q Consensus 104 ~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~-~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 182 (958)
+.+.+..+|+.|++++|....+|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|+|++..+..|..+++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhcCCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 345567777888777766666654 44444 888888888888854 56888888888888888888654455688888
Q ss_pred cceEecccccccccCch--hhcCCccchhhhccCCccccCCCc----ccCCCCCccEEEccCCCCC
Q 002158 183 VRHLHLNNNSIGGQIPS--ELSKLSTLIHLLVDNNNLSGNLPP----ELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 183 L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~----~l~~l~~L~~L~L~~N~l~ 242 (958)
|++|+|++|.|+ .+|. .+..+++|+.|++++|.++. .|. .+..+++|+.|++++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 888888888886 4555 78888888888888888874 444 3778888888888888764
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.42 E-value=1.2e-15 Score=155.71 Aligned_cols=110 Identities=24% Similarity=0.288 Sum_probs=60.3
Q ss_pred cccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccc
Q 002158 128 EIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTL 207 (958)
Q Consensus 128 ~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 207 (958)
.+.++++|++|+|++|.+++ +| .+..+++|++|++++|+++ .+|..+..+++|++|+|++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 55555555555555555553 44 5555555555555555555 445455555555556665555553 23 35555555
Q ss_pred hhhhccCCccccCCC-cccCCCCCccEEEccCCCCC
Q 002158 208 IHLLVDNNNLSGNLP-PELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 208 ~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~ 242 (958)
+.|++++|++++..+ ..+..+++|++|++++|.++
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 566666655553221 34555666666666666554
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.42 E-value=1.8e-12 Score=146.71 Aligned_cols=256 Identities=13% Similarity=0.146 Sum_probs=194.8
Q ss_pred cCCCCccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccc
Q 002158 97 NLSGNLAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKS 176 (958)
Q Consensus 97 ~l~~~~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 176 (958)
+++..-...|.+ .+|+.+.+.+++...-..+|.+. +|+.+.|.+ .++..-+.+|.++++|+.++|.+|+++......
T Consensus 123 ~i~~I~~~aF~~-~~L~~i~l~~~i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~a 199 (401)
T 4fdw_A 123 SVKSIPKDAFRN-SQIAKVVLNEGLKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAST 199 (401)
T ss_dssp TCCEECTTTTTT-CCCSEEECCTTCCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTT
T ss_pred ccCEehHhhccc-CCccEEEeCCCccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhh
Confidence 344444556666 47999988887655555667774 799999986 677566678999999999999999999655566
Q ss_pred cccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCC
Q 002158 177 FANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKL 256 (958)
Q Consensus 177 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L 256 (958)
|. ..+|+.+.|.++ ++.....+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.|. |.++ ..-...|.++++|
T Consensus 200 F~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~-~I~~~aF~~c~~L 273 (401)
T 4fdw_A 200 FV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVT-NIASRAFYYCPEL 273 (401)
T ss_dssp TT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCC-EECTTTTTTCTTC
T ss_pred Ee-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCcc-EEChhHhhCCCCC
Confidence 66 689999999855 77677788999999999999875 66677788888 899999995 4454 2235689999999
Q ss_pred CEEEcccCCCC-----CCCC-CCCCCCCcCEEeccCCcCCCcCCCC--CCCCCcCEEEccCCcCCCccchhccCCCCCCe
Q 002158 257 VKLSLRNCNLQ-----GAVP-DLSRIPNLYYLDLSWNHLTGSIPSK--KLSENVTTIDLSDNYLNGSILESISNLPFLQT 328 (958)
Q Consensus 257 ~~L~L~~N~l~-----~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 328 (958)
+.+.+.+|.+. .+.. .|.++++|+.++|.. .++ .++.. ..+.+|+.|+|..| ++.+...+|.++ +|+.
T Consensus 274 ~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~ 349 (401)
T 4fdw_A 274 AEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKE 349 (401)
T ss_dssp CEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCE
T ss_pred CEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCE
Confidence 99999998876 3444 399999999999994 466 45544 33589999999655 888889999999 9999
Q ss_pred EeeecccCCCccchhhhcccccCccccceEeccCCCCCCCc
Q 002158 329 LSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIV 369 (958)
Q Consensus 329 L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~ 369 (958)
|++++|.+. .++...|... ...+..|.+..|.+....
T Consensus 350 l~l~~n~~~-~l~~~~F~~~---~~~l~~l~vp~~~~~~y~ 386 (401)
T 4fdw_A 350 VKVEGTTPP-QVFEKVWYGF---PDDITVIRVPAESVEKYK 386 (401)
T ss_dssp EEECCSSCC-BCCCSSCCCS---CTTCCEEEECGGGHHHHH
T ss_pred EEEcCCCCc-ccccccccCC---CCCccEEEeCHHHHHHhh
Confidence 999999987 4444433321 124567888887765543
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.38 E-value=6.3e-13 Score=131.79 Aligned_cols=105 Identities=25% Similarity=0.324 Sum_probs=68.0
Q ss_pred CcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccC
Q 002158 135 LIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDN 214 (958)
Q Consensus 135 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 214 (958)
.+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456777777776 4665443 6667777777777766666666667777777777776655555566666666666666
Q ss_pred CccccCCCcccCCCCCccEEEccCCCCC
Q 002158 215 NNLSGNLPPELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 215 N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 242 (958)
|+|++..+..|..+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 6666555555666666666666666654
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=1.2e-12 Score=130.19 Aligned_cols=104 Identities=24% Similarity=0.356 Sum_probs=58.2
Q ss_pred cEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCC
Q 002158 136 IFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNN 215 (958)
Q Consensus 136 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 215 (958)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45566666654 4554443 55666666666665555555555666666666666665444444455555555555555
Q ss_pred ccccCCCcccCCCCCccEEEccCCCCC
Q 002158 216 NLSGNLPPELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 216 ~l~~~~~~~l~~l~~L~~L~L~~N~l~ 242 (958)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555444444555555555555555554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.33 E-value=2.5e-12 Score=127.42 Aligned_cols=86 Identities=26% Similarity=0.395 Sum_probs=50.9
Q ss_pred CCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCCccchhhhc
Q 002158 133 SSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLV 212 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 212 (958)
++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 45556666666666555555666666666666666666554445556666666666666666544445566666666666
Q ss_pred cCCccc
Q 002158 213 DNNNLS 218 (958)
Q Consensus 213 ~~N~l~ 218 (958)
++|.+.
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 666555
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.33 E-value=2.8e-12 Score=127.58 Aligned_cols=94 Identities=26% Similarity=0.397 Sum_probs=55.5
Q ss_pred CCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhc
Q 002158 123 GTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELS 202 (958)
Q Consensus 123 ~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 202 (958)
+.+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.
T Consensus 25 ~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 102 (174)
T 2r9u_A 25 ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFD 102 (174)
T ss_dssp SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhc
Confidence 34444332 4566666666666655555666666666666666666654444456666666666666666644444466
Q ss_pred CCccchhhhccCCccc
Q 002158 203 KLSTLIHLLVDNNNLS 218 (958)
Q Consensus 203 ~l~~L~~L~L~~N~l~ 218 (958)
.+++|+.|+|++|.+.
T Consensus 103 ~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 103 NLKSLTHIYLYNNPWD 118 (174)
T ss_dssp TCTTCSEEECCSSCBC
T ss_pred cccCCCEEEeCCCCcc
Confidence 6666666666666665
No 398
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=6.6e-12 Score=133.94 Aligned_cols=144 Identities=15% Similarity=0.107 Sum_probs=112.6
Q ss_pred HHcCCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEE
Q 002158 623 ATAYFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 623 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E 701 (958)
.-..|.....++.|+.+.||++.. +++.+++|+...........+.+|+++++.+. |..+.++++++...+..|+|||
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 345676667788888899999975 46899999987532122335889999999984 6788899999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE--------------------------------------- 742 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~--------------------------------------- 742 (958)
|++|.+|.+.+.. ......++.+++++|+.||+.
T Consensus 91 ~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 91 EADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp CCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred ecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 9999999887421 122347888999999999981
Q ss_pred -----------------CCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 743 -----------------AHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 743 -----------------~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01349999999999999876667799999765
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=1.7e-11 Score=136.56 Aligned_cols=12 Identities=25% Similarity=0.647 Sum_probs=8.0
Q ss_pred CC-CCCCCceeeC
Q 002158 66 PC-MSNWTGVLCF 77 (958)
Q Consensus 66 ~c-~~~w~gV~C~ 77 (958)
.| .|.|.+|.|.
T Consensus 4 ~c~~C~~~~v~~~ 16 (347)
T 2ifg_A 4 ACCPHGSSGLRCT 16 (347)
T ss_dssp SSCCSSSSCEECC
T ss_pred cCccccCCEEEcC
Confidence 46 5677777773
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=2.2e-13 Score=152.69 Aligned_cols=47 Identities=15% Similarity=0.167 Sum_probs=26.2
Q ss_pred CCcCEEEccCCcCCCc----cchhccCCCCCCeEeeecccCCCccchhhhc
Q 002158 300 ENVTTIDLSDNYLNGS----ILESISNLPFLQTLSLENNFLTGSIPATIWQ 346 (958)
Q Consensus 300 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~ 346 (958)
++|+.|+|++|.|+.. +...+...++|++|+|++|.|++.....+..
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 3455555555555442 2333445667777777777776554444443
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=3.5e-11 Score=133.96 Aligned_cols=103 Identities=20% Similarity=0.193 Sum_probs=75.7
Q ss_pred EEEeeCC-CCCCCCChhhcCCCCCCEEeccc-ccccccCccccccccccceEecccccccccCchhhcCCccchhhhccC
Q 002158 137 FLLLNGN-KLSGSLPDELGYLSNLNRLQVDE-NNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDN 214 (958)
Q Consensus 137 ~L~Ls~n-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 214 (958)
.++++++ +|+ .+|. |..+++|++|+|++ |+|++..+..|.+|++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577776 777 5676 77777777888875 777766667777777777777777777777777777777777777777
Q ss_pred CccccCCCcccCCCCCccEEEccCCCCC
Q 002158 215 NNLSGNLPPELSELPQLCILQLDNNNFS 242 (958)
Q Consensus 215 N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 242 (958)
|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777766555565555 777777777775
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.15 E-value=6.1e-13 Score=149.16 Aligned_cols=171 Identities=19% Similarity=0.204 Sum_probs=92.0
Q ss_pred CCCCcEEEeeCCCCCCCCChhhcC-----CCCCCEEecccccccccCcccc-ccccccceEecccccccccCchhh----
Q 002158 132 ISSLIFLLLNGNKLSGSLPDELGY-----LSNLNRLQVDENNITGTIPKSF-ANLSRVRHLHLNNNSIGGQIPSEL---- 201 (958)
Q Consensus 132 l~~L~~L~Ls~n~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~l---- 201 (958)
+++|++|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|+.|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 356778888888877433333332 2577888888887764433333 245677777777777764333332
Q ss_pred -cCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEcccCCCCCCC-----CCCCC
Q 002158 202 -SKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSLRNCNLQGAV-----PDLSR 275 (958)
Q Consensus 202 -~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~N~l~~~~-----~~l~~ 275 (958)
...++|++|+|++|.|+..... .++..+..+++|++|+|++|.|+... ..+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~---------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~ 209 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVA---------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDR 209 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHH---------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGG
T ss_pred HhcCCccceeeCCCCCCChHHHH---------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhc
Confidence 1234455555555544321100 12223344455555555555554321 11444
Q ss_pred CCCcCEEeccCCcCCCcCC-----CCCCCCCcCEEEccCCcCCCccchhccCC
Q 002158 276 IPNLYYLDLSWNHLTGSIP-----SKKLSENVTTIDLSDNYLNGSILESISNL 323 (958)
Q Consensus 276 l~~L~~L~Ls~N~l~~~~~-----~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l 323 (958)
.++|+.|+|++|.|+.... .....++|++|+|++|.|+......+..+
T Consensus 210 ~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 210 NRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp CSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred CCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 5566677777776653111 01223678888888888877666666554
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=8.3e-11 Score=125.03 Aligned_cols=131 Identities=23% Similarity=0.194 Sum_probs=98.8
Q ss_pred eee-eeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCC--cceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 632 QVG-QGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRN--LVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 632 ~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
.++ .|..+.||++...+|+.+++|...... ...+.+|+++++.+.+.+ +.+++++...++..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 455689999987778889999976542 235778999999986444 56699998888889999999999888
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcC---------------------------------------------
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEA--------------------------------------------- 743 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--------------------------------------------- 743 (958)
. ... .+ ...++.++++.|..||+..
T Consensus 103 ~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 103 L--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp T--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred C--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 4 221 11 2356777888888888643
Q ss_pred ----------CCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 744 ----------HPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 744 ----------~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.+.++|+|++|.||++++++.+.|+|||.+..
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776677999998753
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.02 E-value=5.2e-09 Score=118.51 Aligned_cols=199 Identities=13% Similarity=0.047 Sum_probs=110.9
Q ss_pred cccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC-----------
Q 002158 175 KSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA----------- 243 (958)
Q Consensus 175 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~----------- 243 (958)
.+|.++++|+.+.+.++..+ ....+|.++.+|+.+.+..| ++.+...+|.++..|+.+.+..+....
T Consensus 156 ~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~ 233 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVK 233 (394)
T ss_dssp TTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCC
T ss_pred hhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCc
Confidence 44666666666666554332 44455666666666666554 443445556666666655554443210
Q ss_pred ---------CCccccccCCCCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCC
Q 002158 244 ---------SEIPATYGNFSKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNG 314 (958)
Q Consensus 244 ---------~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~ 314 (958)
..-...|.++.+|+.+.+..+...-....|..+..|+.+.+..+.+.. .....+.+|+.+.+.++ ++.
T Consensus 234 ~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~~i~l~~~-i~~ 310 (394)
T 4fs7_A 234 NIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCSSLTEVKLLDS-VKF 310 (394)
T ss_dssp EEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECT--TTTTTCTTCCEEEECTT-CCE
T ss_pred eEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeecc--ccccccccccccccccc-cce
Confidence 011223445555555555544332111235555556655555443211 11233467888887654 666
Q ss_pred ccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCC
Q 002158 315 SILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGN 385 (958)
Q Consensus 315 ~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N 385 (958)
+...+|.++.+|+.++|.++ ++ .|+...|.. ...|+.+++..| ++.|.... +..+|+.+++..|
T Consensus 311 I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~----c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 311 IGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRG----CTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ECTTTTTTCTTCCEECCCTT-CC-EECTTTTTT----CTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred echhhhcCCCCCCEEEeCCc-cc-EEhHHhccC----CCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 77777888888888888644 55 454443321 234557777766 77776655 6677888877544
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.97 E-value=7.9e-10 Score=123.62 Aligned_cols=142 Identities=20% Similarity=0.311 Sum_probs=107.3
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEec--cCC-hhcHHHHHHHHHHHHccC--CCCcceEEEEEEeC---CeEEEEEE
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAE--EGS-LQGQNEFLTEIKLLSRLH--HRNLVSLLGYCDEE---GEQMLVYE 701 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lV~E 701 (958)
.+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 457899999999998875 4678888876 322 122346789999999996 45688999998876 45899999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEA-------------------------------------- 743 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-------------------------------------- 743 (958)
|++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 99987775422 123677888899999999999999731
Q ss_pred -----------------CCCeeccCCCccceEecCCCC--eEEeeeeeeccc
Q 002158 744 -----------------HPPVFHRDIKASNILLDSNLN--AKVADFGLSRLA 776 (958)
Q Consensus 744 -----------------~~~iiH~Dikp~NILl~~~~~--~kl~DFGla~~~ 776 (958)
.+.++|||+++.||+++.++. +.|+||+.+...
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 245999999999999997753 689999988753
No 406
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.91 E-value=1.3e-09 Score=118.75 Aligned_cols=192 Identities=18% Similarity=0.186 Sum_probs=124.2
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCC--cceEEEEEEeCC---eEEEEEEec
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRN--LVSLLGYCDEEG---EQMLVYEFV 703 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lV~E~~ 703 (958)
.+.++.|.+..||+.. +.+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 56889986532 34567889999999883 333 445555544333 458999999
Q ss_pred CCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-----------------------------------------
Q 002158 704 PNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE----------------------------------------- 742 (958)
Q Consensus 704 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~----------------------------------------- 742 (958)
+|.++.+.... .++.+++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 99888654321 266777788888888888888861
Q ss_pred --------------CCCCeeccCCCccceEecC--CCCeEEeeeeeecccccCCCCCCccc-------eeeeeccCCCCc
Q 002158 743 --------------AHPPVFHRDIKASNILLDS--NLNAKVADFGLSRLAPVLDDEGTMPT-------HVSTIVKGTPGY 799 (958)
Q Consensus 743 --------------~~~~iiH~Dikp~NILl~~--~~~~kl~DFGla~~~~~~~~~~~~~~-------~~~~~~~gt~~y 799 (958)
..+.++|+|++|.||++++ +..+.|+||+.+...+...+-..... .....+....++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1245899999999999998 45688999998875432111000000 000000000111
Q ss_pred cC-hhhhccCCCCCcchhhhHHHHHHHHHhCCCCC
Q 002158 800 LD-PEYFLTHKLTDKSDVYSLGVVLLELLTGMQPI 833 (958)
Q Consensus 800 ~a-PE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~ 833 (958)
.. |+..... ....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 22 2222111 12368999999999999998776
No 407
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.89 E-value=2.2e-08 Score=113.37 Aligned_cols=266 Identities=8% Similarity=-0.041 Sum_probs=155.9
Q ss_pred ccccccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCcccccccc
Q 002158 102 LAPELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLS 181 (958)
Q Consensus 102 ~~~~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 181 (958)
-..+|.+.++|+.+.+.++....-..+|.++++|+.++|.++ ++..-..+|.++.+|+.+.+..+ +......+|.++.
T Consensus 63 g~~AF~~c~~L~~i~lp~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 63 GYAAFQGCRKVTEIKIPSTVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp CTTTTTTCTTEEEEECCTTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHHhhCCCCceEEEeCCCccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 345677788888888876655444566888889999988755 55344566888888888877655 4435556677665
Q ss_pred ccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEEc
Q 002158 182 RVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLSL 261 (958)
Q Consensus 182 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L 261 (958)
.++......... ....+|.++++|+.+.+.++- ......+|.++++|+.+.+..| ++ ..-...|.++..|+.+.+
T Consensus 141 ~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~ 215 (394)
T 4fs7_A 141 FKEITIPEGVTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEF 215 (394)
T ss_dssp CSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCC
T ss_pred ccccccCccccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ce-EeCchhhccccccceeec
Confidence 544444333322 345679999999999998664 4466788999999999999877 32 122446777777777666
Q ss_pred ccCCCCCCCCC-----------------------CCCCCCcCEEeccCCcCCCcCCCCCCCCCcCEEEccCCcCCCccch
Q 002158 262 RNCNLQGAVPD-----------------------LSRIPNLYYLDLSWNHLTGSIPSKKLSENVTTIDLSDNYLNGSILE 318 (958)
Q Consensus 262 ~~N~l~~~~~~-----------------------l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~ 318 (958)
..+... .... +..+.+|+.+.+..+...-..........|+.+.+..+.+ ...
T Consensus 216 ~~~~~~-i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~ 291 (394)
T 4fs7_A 216 PNSLYY-LGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEK 291 (394)
T ss_dssp CTTCCE-ECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTT
T ss_pred CCCceE-eehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccc
Confidence 554322 1111 3334444444444433220111112224444444443322 234
Q ss_pred hccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCC
Q 002158 319 SISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGN 385 (958)
Q Consensus 319 ~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N 385 (958)
.|..+.+|+.+.+.++ ++ .|+...|.. ...|+.++|.+ .++.|.... +..+|+.+.|..|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~-~I~~~aF~~----c~~L~~i~lp~-~v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VK-FIGEEAFES----CTSLVSIDLPY-LVEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTTCTTCCEEEECTT-CC-EECTTTTTT----CTTCCEECCCT-TCCEECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccccccccc-cc-eechhhhcC----CCCCCEEEeCC-cccEEhHHhccCCCCCCEEEECcc
Confidence 4556666666666544 33 343333221 23445666653 366665544 5566676666544
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.80 E-value=1.2e-09 Score=121.43 Aligned_cols=188 Identities=17% Similarity=0.237 Sum_probs=93.5
Q ss_pred CCCcEEEeeCCCCCC-CC-------ChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccCchhhcCC
Q 002158 133 SSLIFLLLNGNKLSG-SL-------PDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKL 204 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~-~~-------p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 204 (958)
.+++.|.+......| .. ..++..+++|+.|.+..+..... .++... .+.+...+..+
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~--------------~is~~~-~~~L~~ll~~~ 171 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ--------------EISWIE-QVDLSPVLDAM 171 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC--------------CGGGCB-CCBCHHHHHTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc--------------cccccc-ccCHHHHHhcC
Confidence 456778887665442 11 22244566777776655432100 000000 01233444555
Q ss_pred ccchhhhccCCc-cccCCCcccCCCCCccEEEccCCCCCCCCccccc--cCCCCCCEEEccc--CCCCCC------CCCC
Q 002158 205 STLIHLLVDNNN-LSGNLPPELSELPQLCILQLDNNNFSASEIPATY--GNFSKLVKLSLRN--CNLQGA------VPDL 273 (958)
Q Consensus 205 ~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~--~~l~~L~~L~L~~--N~l~~~------~~~l 273 (958)
++|+.|+|++|. +. ++. +. +++|+.|+|..|.++... ...+ ..+++|+.|+|+. |...+. .+.+
T Consensus 172 P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~-l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 172 PLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSV-VEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHH-HHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHH-HHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 666666665552 21 122 22 567777777766664211 1122 2566777776642 211111 0111
Q ss_pred --CCCCCcCEEeccCCcCCCcCC----CCCCCCCcCEEEccCCcCCCcc----chhccCCCCCCeEeeecccCCCcc
Q 002158 274 --SRIPNLYYLDLSWNHLTGSIP----SKKLSENVTTIDLSDNYLNGSI----LESISNLPFLQTLSLENNFLTGSI 340 (958)
Q Consensus 274 --~~l~~L~~L~Ls~N~l~~~~~----~~~~~~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~i 340 (958)
..+++|+.|+|++|.+..... ....+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.|+...
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~ 323 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM 323 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH
Confidence 245677777777776653211 1123467777777777776543 223344577777777777766433
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.77 E-value=1.5e-09 Score=120.51 Aligned_cols=184 Identities=16% Similarity=0.220 Sum_probs=101.8
Q ss_pred ccccCCCCCcEEEeeCCCCC---------CCCChhhcCCCCCCEEecccccccccCccccccccccceEecccccccccC
Q 002158 127 KEIGNISSLIFLLLNGNKLS---------GSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNSIGGQI 197 (958)
Q Consensus 127 ~~i~~l~~L~~L~Ls~n~l~---------~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 197 (958)
.++.++++|+.|.+..+... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++...
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHH
Confidence 44667889999999776432 124455566777888877776311 1222 3 2667777777776665332
Q ss_pred chhhc--CCccchhhhccC--CccccCCCcccCCCCCccEEEccCCCCCCCCccccc--cCCCCCCEEEcccCCCCCCCC
Q 002158 198 PSELS--KLSTLIHLLVDN--NNLSGNLPPELSELPQLCILQLDNNNFSASEIPATY--GNFSKLVKLSLRNCNLQGAVP 271 (958)
Q Consensus 198 p~~l~--~l~~L~~L~L~~--N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~ 271 (958)
...+. .+++|+.|+|+. |...+.. . + ..+...+ ..+++|+.|+|.+|.+.....
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~----------------~--~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~ 269 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDG--D----------------M--NVFRPLFSKDRFPNLKWLGIVDAEEQNVVV 269 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCS--C----------------G--GGTGGGSCTTTCTTCCEEEEESCTTHHHHH
T ss_pred HHHHHHccCCCCcEEEEeccccccccch--h----------------H--HHHHHHHhcCCCCCcCEEeCCCCCCchHHH
Confidence 23332 455666665542 1111100 0 0 0000111 235666666666666553211
Q ss_pred -C---CCCCCCcCEEeccCCcCCCc----CCC-CCCCCCcCEEEccCCcCCCccchhccC-CCCCCeEeeeccc
Q 002158 272 -D---LSRIPNLYYLDLSWNHLTGS----IPS-KKLSENVTTIDLSDNYLNGSILESISN-LPFLQTLSLENNF 335 (958)
Q Consensus 272 -~---l~~l~~L~~L~Ls~N~l~~~----~~~-~~~~~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~ 335 (958)
. ...+++|+.|+|+.|.+++. +.. ...+++|+.|+|++|.|+......+.. + ...+++++|+
T Consensus 270 ~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 270 EMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 1 13467788888888877642 111 134578888888888887665555554 3 4557777776
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.74 E-value=2.6e-07 Score=104.51 Aligned_cols=267 Identities=9% Similarity=0.089 Sum_probs=157.8
Q ss_pred cccCCC-CcceeeccCcccCCCCccccCCCCCcEEEeeCCC---CCCCCChhhcCCCCCCEEecccccccccCccccccc
Q 002158 105 ELGQLS-RLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNK---LSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANL 180 (958)
Q Consensus 105 ~l~~L~-~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~---l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 180 (958)
+|.+.. .|+.+.+-++....-..+|.++++|+.+.+..|. ++..-..+|..+.+|+.+.+..+ ++......|..+
T Consensus 58 aF~~~~~~L~sI~iP~svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c 136 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDTVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHC 136 (394)
T ss_dssp TTTTCCSCCCEEEECTTCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTC
T ss_pred hccCCCCcCEEEEECCCeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhh
Confidence 344442 4666666655554445667777788888777653 44334456677777777776654 443445567777
Q ss_pred cccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCCCCccccccCCCCCCEEE
Q 002158 181 SRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSASEIPATYGNFSKLVKLS 260 (958)
Q Consensus 181 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 260 (958)
.+|+.+.+..+. .......|..+.+|+.+.+.++ +..+...+|.+ .+|+.+.+..+-.. .-...|.++.+|+...
T Consensus 137 ~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~--i~~~af~~c~~l~~~~ 211 (394)
T 4gt6_A 137 EELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR--IGTNAFSECFALSTIT 211 (394)
T ss_dssp TTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE--ECTTTTTTCTTCCEEE
T ss_pred ccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc--cccchhhhccccceec
Confidence 777777776443 3244556666777777666544 33333444443 45666655443321 1123344444444433
Q ss_pred cccCC------------------------------------CCCCCC-CCCCCCCcCEEeccCCcCCCcCCCC--CCCCC
Q 002158 261 LRNCN------------------------------------LQGAVP-DLSRIPNLYYLDLSWNHLTGSIPSK--KLSEN 301 (958)
Q Consensus 261 L~~N~------------------------------------l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~--~~~~~ 301 (958)
...+. ++.+.. .|.++.+|+.+.+..+..+ +... ..+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~ 289 (394)
T 4gt6_A 212 SDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS--IGTGAFMNCPA 289 (394)
T ss_dssp ECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTT
T ss_pred ccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce--ecCcccccccc
Confidence 32211 111122 2677788888888766543 3332 33578
Q ss_pred cCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcce
Q 002158 302 VTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVT 379 (958)
Q Consensus 302 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~ 379 (958)
|+.+.+. +.++.+....|.++.+|+.++|..+ ++ .|....|.. ...|+.+.|..+ ++.|.... +..+|+.
T Consensus 290 L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~----C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~ 361 (394)
T 4gt6_A 290 LQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAG----CEQLERIAIPSS-VTKIPESAFSNCTALNN 361 (394)
T ss_dssp CCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTT----CTTCCEEEECTT-CCBCCGGGGTTCTTCCE
T ss_pred cccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhC----CCCCCEEEECcc-cCEEhHhHhhCCCCCCE
Confidence 8888886 5577777788888888888888765 54 454444331 235567888644 77777654 7788888
Q ss_pred EEeCCCCC
Q 002158 380 LRLGGNPI 387 (958)
Q Consensus 380 L~l~~N~l 387 (958)
+++.+|..
T Consensus 362 i~~~~~~~ 369 (394)
T 4gt6_A 362 IEYSGSRS 369 (394)
T ss_dssp EEESSCHH
T ss_pred EEECCcee
Confidence 88888754
No 411
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.59 E-value=7.8e-07 Score=100.49 Aligned_cols=283 Identities=12% Similarity=0.171 Sum_probs=150.5
Q ss_pred eEEEEccCCcCCCCccccccCCCCcceeeccCcc---cCCC-CccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEe
Q 002158 88 VRELQLLSMNLSGNLAPELGQLSRLQYYFMWNDL---TGTI-PKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQ 163 (958)
Q Consensus 88 v~~L~L~~~~l~~~~~~~l~~L~~L~~L~l~n~~---~~~i-p~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 163 (958)
++++.+.+ +++..-..+|.+.++|+.+.+.++. ...| ..+|.++.+|+.+.+..+ ++..-...|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 45555543 3444445667788888888776543 2233 345677777777766544 3324445567777777777
Q ss_pred cccccccccCccccccccccceEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC
Q 002158 164 VDENNITGTIPKSFANLSRVRHLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA 243 (958)
Q Consensus 164 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 243 (958)
+..+ +..+....|..+.+|+.+.+.++ ++..-..+|.+ .+|+.+.+..+-.. ....+|..+.+|+......+....
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceeccccccccc
Confidence 7644 33345556777777777777654 33233344433 45665555443222 333445555555444333221110
Q ss_pred ---------------------------CCc--------cccccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCC
Q 002158 244 ---------------------------SEI--------PATYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWN 287 (958)
Q Consensus 244 ---------------------------~~~--------p~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N 287 (958)
..+ ...|.++.+|+.+.+.++..+ +.. .|.++++|+.+.+. +
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~ 297 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-S 297 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-T
T ss_pred ccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-C
Confidence 011 224666777777777655433 333 37777777777775 3
Q ss_pred cCCCcCCCCC--CCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCCCccchhhhcccccCccccceEeccCCCC
Q 002158 288 HLTGSIPSKK--LSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSF 365 (958)
Q Consensus 288 ~l~~~~~~~~--~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l 365 (958)
.++ .++... .+.+|+.++|..+ ++.+...+|.++.+|+.+.|..+ ++ .|....|.. ...|+.+++.+|..
T Consensus 298 ~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~----C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 298 RIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSN----CTALNNIEYSGSRS 369 (394)
T ss_dssp TCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTT----CTTCCEEEESSCHH
T ss_pred ccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhC----CCCCCEEEECCcee
Confidence 344 344332 3467777777654 66666777777777887777544 54 444444331 23455777776643
Q ss_pred CCCccCCCCCCcceEEeCCCCC
Q 002158 366 SNIVGDLTLPNNVTLRLGGNPI 387 (958)
Q Consensus 366 ~~l~~~~~l~~L~~L~l~~N~l 387 (958)
. +..-....+|+.|.+..|.+
T Consensus 370 ~-~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 370 Q-WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp H-HHTCBCCCCC----------
T ss_pred e-hhhhhccCCCCEEEeCCCCE
Confidence 2 22222455666666665543
No 412
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58 E-value=2.4e-07 Score=101.53 Aligned_cols=137 Identities=16% Similarity=0.180 Sum_probs=102.4
Q ss_pred CCCCCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCC----CCcceEEEEEEeCCeEEEEEE
Q 002158 626 YFSSSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHH----RNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 626 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lV~E 701 (958)
.....+.++.|....||+. ++.+++|+... ......+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5566778999999999998 66788998743 2223468899999998866 224555555 56789999
Q ss_pred ecCCCCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCC-------------------------------------
Q 002158 702 FVPNGTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAH------------------------------------- 744 (958)
Q Consensus 702 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~------------------------------------- 744 (958)
|++|.++.+... ..++..++..++.++++.++.||+...
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988864332 125666677788888888888885432
Q ss_pred -----------------------CCeeccCCCccceEecCCCCeEEeeeeeeccc
Q 002158 745 -----------------------PPVFHRDIKASNILLDSNLNAKVADFGLSRLA 776 (958)
Q Consensus 745 -----------------------~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 776 (958)
+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998766799999988654
No 413
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.57 E-value=1.9e-07 Score=100.40 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=61.1
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCC---CcceEEEEEEeCCeEEEEEEecCCC
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHR---NLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
.+.|+.|.++.||++...+|+.++||+...........|.+|++.|+.+.+. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 4679999999999999888999999997543333345789999999999765 578888764 368999999998
Q ss_pred CH
Q 002158 707 TL 708 (958)
Q Consensus 707 sL 708 (958)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 414
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.47 E-value=6.2e-08 Score=90.59 Aligned_cols=85 Identities=24% Similarity=0.387 Sum_probs=57.4
Q ss_pred eEeeecccCC-CccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCCCCCCCCCCCCCCcccccCC
Q 002158 328 TLSLENNFLT-GSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGNPICTSANIPNTGRFCGSDA 404 (958)
Q Consensus 328 ~L~L~~N~l~-~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 404 (958)
.++.+++.|+ ..+|..+ ...++.|+|++|+|+.++... .+++|+.|+|.+|||
T Consensus 12 ~v~Cs~~~L~~~~vP~~l-------p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~----------------- 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF-------PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW----------------- 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC-------CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC-----------------
T ss_pred EEEeCCCCCccccCCCCC-------CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe-----------------
Confidence 4555555554 3455443 234567777777777777654 678888888877777
Q ss_pred CCCccccccCCCCCCCCCCCCCcccccCCC--CCCceeeeeceee
Q 002158 405 GGDETLTNSKVNCPVQACPVDNFFEYVPAS--PEPCFCAAPLRIG 447 (958)
Q Consensus 405 ~~~~~L~~n~~~C~c~~~~~~~~~~~~~~~--~~~~~c~sp~~~~ 447 (958)
.|||.+.++..|++..... .....|++|...+
T Consensus 68 -----------~CdC~l~~l~~wl~~~~~~~~~~~~~C~~P~~l~ 101 (130)
T 3rfe_A 68 -----------RCDCRLVPLRAWLAGRPERAPYRDLRCVAPPALR 101 (130)
T ss_dssp -----------BCSGGGHHHHHHHHTSSCSGGGTTCBCCBSTTTT
T ss_pred -----------eccCccHHHHHHHHhCcccccccCcEeCcChHHc
Confidence 7888888888898765432 2357899987643
No 415
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.46 E-value=6.3e-07 Score=95.55 Aligned_cols=135 Identities=17% Similarity=0.168 Sum_probs=98.8
Q ss_pred eeeeeCCe-EEEEEEEC-CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 632 QVGQGGYG-KVYKGILS-DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 632 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
.+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 46667666 69998765 4677999987542 3446788999998884 44477899999999999999999999888
Q ss_pred HHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcC---------------------------------------------
Q 002158 709 RDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEA--------------------------------------------- 743 (958)
Q Consensus 709 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--------------------------------------------- 743 (958)
.+..... ......++.++++.|..||+..
T Consensus 108 ~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 108 FQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred cccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 7765321 1223345566666666666421
Q ss_pred ----------CCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 744 ----------HPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 744 ----------~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
.+.++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12389999999999999877778999998753
No 416
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.46 E-value=1e-06 Score=95.80 Aligned_cols=136 Identities=22% Similarity=0.221 Sum_probs=96.0
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCC---CcceEEEEEE-eCCeEEEEEEecCC
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHR---NLVSLLGYCD-EEGEQMLVYEFVPN 705 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lV~E~~~~ 705 (958)
.+.++.|....||+. ++.+++|+.. .......+.+|+++|+.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356888888999997 5678888853 233456788999999999652 3667777774 45668899999999
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhc-------------------------------------------
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTE------------------------------------------- 742 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~------------------------------------------- 742 (958)
.++.+.... .++..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 888663211 134445555555555555555542
Q ss_pred --------------CCCCeeccCCCccceEecC---CCC-eEEeeeeeecc
Q 002158 743 --------------AHPPVFHRDIKASNILLDS---NLN-AKVADFGLSRL 775 (958)
Q Consensus 743 --------------~~~~iiH~Dikp~NILl~~---~~~-~kl~DFGla~~ 775 (958)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2234799999999999987 455 48999998764
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.29 E-value=6.3e-08 Score=96.92 Aligned_cols=91 Identities=15% Similarity=0.206 Sum_probs=48.4
Q ss_pred cccCCCCCcEEEeeCC-CCCCC----CChhhcCCCCCCEEeccccccccc----CccccccccccceEeccccccccc--
Q 002158 128 EIGNISSLIFLLLNGN-KLSGS----LPDELGYLSNLNRLQVDENNITGT----IPKSFANLSRVRHLHLNNNSIGGQ-- 196 (958)
Q Consensus 128 ~i~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~-- 196 (958)
.+...++|++|+|++| .+... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3555666777777776 66521 233445556677777777766532 233344445666666666666532
Q ss_pred --CchhhcCCccchhhhc--cCCccc
Q 002158 197 --IPSELSKLSTLIHLLV--DNNNLS 218 (958)
Q Consensus 197 --~p~~l~~l~~L~~L~L--~~N~l~ 218 (958)
+...+...++|++|+| ++|.|.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2233333444444444 444444
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.28 E-value=6.9e-08 Score=96.64 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=53.6
Q ss_pred hhhcCCCCCCEEecccc-ccccc----CccccccccccceEeccccccccc----CchhhcCCccchhhhccCCccccC-
Q 002158 151 DELGYLSNLNRLQVDEN-NITGT----IPKSFANLSRVRHLHLNNNSIGGQ----IPSELSKLSTLIHLLVDNNNLSGN- 220 (958)
Q Consensus 151 ~~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~- 220 (958)
..+...++|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 44666788888888888 77632 334455567788888888877632 223334445566666666655532
Q ss_pred ---CCcccCCCCCccEEEc--cCCCCC
Q 002158 221 ---LPPELSELPQLCILQL--DNNNFS 242 (958)
Q Consensus 221 ---~~~~l~~l~~L~~L~L--~~N~l~ 242 (958)
+...+...++|++|+| ++|.|+
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2334444455555555 445543
No 419
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.23 E-value=2.6e-06 Score=94.71 Aligned_cols=74 Identities=8% Similarity=0.088 Sum_probs=57.5
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCC--cceEEEEEEeC-CeEEEEEEecCCC
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRN--LVSLLGYCDEE-GEQMLVYEFVPNG 706 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lV~E~~~~g 706 (958)
.+.++.|....+|+... +++.+++|..... ..+.+|+.+++.+.... +.++++++... +..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 45788999999999876 5788999987542 25788999999886433 56788887764 6789999999876
Q ss_pred CHH
Q 002158 707 TLR 709 (958)
Q Consensus 707 sL~ 709 (958)
++.
T Consensus 120 ~l~ 122 (362)
T 3ovc_A 120 TLQ 122 (362)
T ss_dssp ETT
T ss_pred Ccc
Confidence 553
No 420
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.22 E-value=9.7e-07 Score=98.25 Aligned_cols=79 Identities=6% Similarity=0.012 Sum_probs=56.1
Q ss_pred cee-eeeCCeEEEEEEEC-------CCcEEEEEEeccCC---hhcHHHHHHHHHHHHccC-C--CCcceEEEEEEeC---
Q 002158 631 TQV-GQGGYGKVYKGILS-------DNTTVAIKRAEEGS---LQGQNEFLTEIKLLSRLH-H--RNLVSLLGYCDEE--- 693 (958)
Q Consensus 631 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~--- 693 (958)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999998764 26778899865422 101235678999988884 3 3577888888665
Q ss_pred CeEEEEEEecCCCCHH
Q 002158 694 GEQMLVYEFVPNGTLR 709 (958)
Q Consensus 694 ~~~~lV~E~~~~gsL~ 709 (958)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4578999999887654
No 421
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.22 E-value=4e-05 Score=85.81 Aligned_cols=126 Identities=12% Similarity=0.102 Sum_probs=63.6
Q ss_pred cccCCCCCCEEEcccCCCCCCCC-CCCCCCCcCEEeccCCcCCCcCCCC--CCCCCcCEEEccCCcCCCccchhccCCCC
Q 002158 249 TYGNFSKLVKLSLRNCNLQGAVP-DLSRIPNLYYLDLSWNHLTGSIPSK--KLSENVTTIDLSDNYLNGSILESISNLPF 325 (958)
Q Consensus 249 ~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 325 (958)
.+....+|+.+.+..+ ++.+.. .+.++.+|+.+.+..+ ++ .+... ..+.+|+.+.+..+ ++......|.++.+
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccc
Confidence 3444555555555433 222222 2555666666666554 33 22222 22356666666433 54455556666666
Q ss_pred CCeEeeecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCC
Q 002158 326 LQTLSLENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGG 384 (958)
Q Consensus 326 L~~L~L~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~ 384 (958)
|+.+.+.++.++ .|+...|.. ...|+.++|.++ ++.|.... +..+|+.+.+..
T Consensus 288 L~~i~l~~~~i~-~I~~~aF~~----c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 288 LTKVVMDNSAIE-TLEPRVFMD----CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CCEEEECCTTCC-EECTTTTTT----CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccccccccc-eehhhhhcC----CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 666666666665 444433321 123445666533 55555443 455666665543
No 422
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.18 E-value=2.6e-07 Score=97.22 Aligned_cols=104 Identities=19% Similarity=0.283 Sum_probs=61.3
Q ss_pred ccCCCCCcE--EEeeCCCCCCCCCh----hhcCCCCCCEEecccccccc--cCccccccccccceEecccccccccCchh
Q 002158 129 IGNISSLIF--LLLNGNKLSGSLPD----ELGYLSNLNRLQVDENNITG--TIPKSFANLSRVRHLHLNNNSIGGQIPSE 200 (958)
Q Consensus 129 i~~l~~L~~--L~Ls~n~l~~~~p~----~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 200 (958)
+...+.|.. ++++.|... .++. ...++++|++|+|++|+|++ .++..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444444544 555666432 2222 12356677777777777775 3445566677777777777777743 22
Q ss_pred hcCCc--cchhhhccCCccccCCC-------cccCCCCCccEEE
Q 002158 201 LSKLS--TLIHLLVDNNNLSGNLP-------PELSELPQLCILQ 235 (958)
Q Consensus 201 l~~l~--~L~~L~L~~N~l~~~~~-------~~l~~l~~L~~L~ 235 (958)
+..+. +|++|+|++|.+.+..| ..+..+|+|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 33333 77777777777775544 2356677787776
No 423
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.15 E-value=1.5e-07 Score=99.04 Aligned_cols=7 Identities=0% Similarity=-0.320 Sum_probs=3.5
Q ss_pred CCCceee
Q 002158 70 NWTGVLC 76 (958)
Q Consensus 70 ~w~gV~C 76 (958)
+|.|+.|
T Consensus 79 ~~~g~i~ 85 (267)
T 3rw6_A 79 AVNYKIL 85 (267)
T ss_dssp HTTSSCB
T ss_pred hcCcEEE
Confidence 3555555
No 424
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.13 E-value=9.1e-05 Score=82.89 Aligned_cols=265 Identities=9% Similarity=0.041 Sum_probs=174.7
Q ss_pred cccCCCCcceeeccCcccCCCCccccCCCCCcEEEeeCCCCCCCCChhhcCCCCCCEEecccccccccCccccccccccc
Q 002158 105 ELGQLSRLQYYFMWNDLTGTIPKEIGNISSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENNITGTIPKSFANLSRVR 184 (958)
Q Consensus 105 ~l~~L~~L~~L~l~n~~~~~ip~~i~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 184 (958)
.+..-.+|+.+.+....+..-..+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++.+...+|.. .+|+
T Consensus 41 ~~~~~~~i~~v~ip~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 41 WYKDRDRISEVRVNSGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp TGGGGGGCSEEEECTTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred ccccccCCEEEEeCCCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 344556677777766665555567888899999998754 654445566665 6777777654 44344445554 4788
Q ss_pred eEecccccccccCchhhcCCccchhhhccCCccccCCCcccCCCCCccEEEccCCCCCC-----------CCccccccCC
Q 002158 185 HLHLNNNSIGGQIPSELSKLSTLIHLLVDNNNLSGNLPPELSELPQLCILQLDNNNFSA-----------SEIPATYGNF 253 (958)
Q Consensus 185 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-----------~~~p~~~~~l 253 (958)
.+.+.++... ....+|.+. +|+.+.+.. .++......|..+.+|+.+.+..+.... ......+...
T Consensus 117 ~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 117 DFEFPGATTE-IGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp EEECCTTCCE-ECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred cccCCCcccc-ccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 8888765332 344455554 555555543 3444556778888888888877654321 1122334455
Q ss_pred CCCCEEEcccCCCCCCCCCCCCCCCcCEEeccCCcCCCcCCCC--CCCCCcCEEEccCCcCCCccchhccCCCCCCeEee
Q 002158 254 SKLVKLSLRNCNLQGAVPDLSRIPNLYYLDLSWNHLTGSIPSK--KLSENVTTIDLSDNYLNGSILESISNLPFLQTLSL 331 (958)
Q Consensus 254 ~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 331 (958)
..+..+.+..+.-.-....+....+|+.+.+..+- . .+... ..+..|+.+.+..+ ++.+....|.++.+|+.+.+
T Consensus 194 ~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~~-~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 194 KTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSGV-T-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCCSEEECCTTCCEECTTTTTTCSSCSEEECCTTC-C-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccccccccceeEEeecccccccccceeeeccce-e-EEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 66666666554433223347788899999987663 2 23332 44589999999876 77788889999999999999
Q ss_pred ecccCCCccchhhhcccccCccccceEeccCCCCCCCccCC--CCCCcceEEeCCC
Q 002158 332 ENNFLTGSIPATIWQNKSFSTKARLKIDLRNNSFSNIVGDL--TLPNNVTLRLGGN 385 (958)
Q Consensus 332 ~~N~l~~~ip~~l~~~~~~~~~~l~~L~Ls~N~l~~l~~~~--~l~~L~~L~l~~N 385 (958)
..+ +. .++...|.. ...|+.+++.++.++.|.... +..+|+.+.|..|
T Consensus 271 ~~~-i~-~i~~~aF~~----c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 271 YAK-VK-TVPYLLCSG----CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CCC-CS-EECTTTTTT----CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccc-ce-ecccccccc----ccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 765 54 455554432 346779999999999998766 7789999998654
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.98 E-value=1.4e-05 Score=90.22 Aligned_cols=75 Identities=15% Similarity=0.103 Sum_probs=49.9
Q ss_pred CceeeeeCCeEEEEEEEC-CCcEEEEEEeccCCh-------hcHHHHHHHHHHHHccCC--CC-cceEEEEEEeCCeEEE
Q 002158 630 STQVGQGGYGKVYKGILS-DNTTVAIKRAEEGSL-------QGQNEFLTEIKLLSRLHH--RN-LVSLLGYCDEEGEQML 698 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~n-iv~l~~~~~~~~~~~l 698 (958)
.+.||.|.++.||++... +++.|+||....... ....++..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999754 468899998653211 123456789999988742 33 4456654 3445689
Q ss_pred EEEecCCC
Q 002158 699 VYEFVPNG 706 (958)
Q Consensus 699 V~E~~~~g 706 (958)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.86 E-value=6.9e-05 Score=81.05 Aligned_cols=137 Identities=17% Similarity=0.200 Sum_probs=92.6
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC---CCCcceEEEEEEeCCeEEEEEEecCCC
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH---HRNLVSLLGYCDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lV~E~~~~g 706 (958)
.+.|+.|.+..+|+... +++.+++|+.... ....|.+|++.|+.+. ...+.++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45789999999999876 5678899987642 3556889999998883 366889999998888999999999987
Q ss_pred CHH--------H---HhccCCC-C-------------------CchHHHHH---HHH--HH--------------HHHH-
Q 002158 707 TLR--------D---WLSGRTK-E-------------------NLNFAMRL---RVA--LD--------------SAKG- 735 (958)
Q Consensus 707 sL~--------~---~l~~~~~-~-------------------~l~~~~~~---~i~--~~--------------ia~a- 735 (958)
.+. + .||.... . .-+|.... ++. .+ +.+.
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 541 1 2232211 0 01343321 111 11 1111
Q ss_pred HHHhhh-cCCCCeeccCCCccceEecCCCCeEEeeee
Q 002158 736 ILYLHT-EAHPPVFHRDIKASNILLDSNLNAKVADFG 771 (958)
Q Consensus 736 L~yLH~-~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 771 (958)
...|.. ...+.++|+|+.+.|++++.++ +.|.||+
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223332 2356799999999999999887 8899984
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.82 E-value=5e-05 Score=83.61 Aligned_cols=139 Identities=17% Similarity=0.161 Sum_probs=79.4
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC--CCCcceEEE------EEEeCCeEEEEEEe
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH--HRNLVSLLG------YCDEEGEQMLVYEF 702 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~------~~~~~~~~~lV~E~ 702 (958)
+.|+.|..+.||+....+| .+++|+.... ..++..|+++++.+. .-.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677889999987555 5899998752 223344555555542 112334443 12346678999999
Q ss_pred cCCCCHH--------------HHhccC--C---C-------CCchHHHH-------------------------------
Q 002158 703 VPNGTLR--------------DWLSGR--T---K-------ENLNFAMR------------------------------- 725 (958)
Q Consensus 703 ~~~gsL~--------------~~l~~~--~---~-------~~l~~~~~------------------------------- 725 (958)
++|..+. ..+|.. . . ..-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986532 111210 0 0 00112110
Q ss_pred HHHHHHHHHHHHHhhh----------cCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 726 LRVALDSAKGILYLHT----------EAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 726 ~~i~~~ia~aL~yLH~----------~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
..+..++.+++++|++ ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666763 123459999999999999888899999999765
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.82 E-value=8.4e-05 Score=79.73 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=57.1
Q ss_pred CCceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCC---CCcceEEEEEEeCCeEEEEEEecCC
Q 002158 629 SSTQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHH---RNLVSLLGYCDEEGEQMLVYEFVPN 705 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~~~~~lV~E~~~~ 705 (958)
..+.+|.|..+.||+.+..||+.|+||+...........|.+|++.|+.+.- --+.+++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 3467999999999999999999999998765544444467899999998842 2355666543 34789999987
Q ss_pred CCH
Q 002158 706 GTL 708 (958)
Q Consensus 706 gsL 708 (958)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.60 E-value=0.00014 Score=82.53 Aligned_cols=73 Identities=15% Similarity=0.185 Sum_probs=46.5
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccC------C---hhcHHHHHHHHHHHHc-cCCCCcceEEEEEEeCCeEEEE
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEG------S---LQGQNEFLTEIKLLSR-LHHRNLVSLLGYCDEEGEQMLV 699 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~------~---~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lV 699 (958)
.+.||.|....||++.. +++.++||..... . ......+..|+..+.. .....+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 35689999999999964 5678999943210 1 1123344444443332 2335667777775 5678999
Q ss_pred EEec-CC
Q 002158 700 YEFV-PN 705 (958)
Q Consensus 700 ~E~~-~~ 705 (958)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.60 E-value=1.7e-05 Score=77.30 Aligned_cols=83 Identities=8% Similarity=0.079 Sum_probs=46.8
Q ss_pred CCCcEEEeeCCCCCCCCChhhcCCCCCCEEeccccc-ccccCccccccc----cccceEeccccc-ccccCchhhcCCcc
Q 002158 133 SSLIFLLLNGNKLSGSLPDELGYLSNLNRLQVDENN-ITGTIPKSFANL----SRVRHLHLNNNS-IGGQIPSELSKLST 206 (958)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~l~~l~~ 206 (958)
-+|++|||+++.++..--..+..+++|++|+|++|. |+..--..++.+ ++|++|+|++|. |+..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357788888877765444456677777777777764 554333344443 356666666653 55322233444444
Q ss_pred chhhhccCC
Q 002158 207 LIHLLVDNN 215 (958)
Q Consensus 207 L~~L~L~~N 215 (958)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 444444444
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.54 E-value=1.4e-05 Score=77.86 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=54.8
Q ss_pred CCCCEEecccccccccCccccccccccceEeccccc-ccccCchhhcCC----ccchhhhccCCc-cccCCCcccCCCCC
Q 002158 157 SNLNRLQVDENNITGTIPKSFANLSRVRHLHLNNNS-IGGQIPSELSKL----STLIHLLVDNNN-LSGNLPPELSELPQ 230 (958)
Q Consensus 157 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~L~~N~-l~~~~~~~l~~l~~ 230 (958)
.+|++|||+++.++..--..+.++++|+.|+|++|. |+..--..+..+ ++|++|+|++|. |+...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888886656667788888888888885 664433445543 356677776663 55433344555666
Q ss_pred ccEEEccCCC
Q 002158 231 LCILQLDNNN 240 (958)
Q Consensus 231 L~~L~L~~N~ 240 (958)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666554
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.35 E-value=0.00095 Score=73.02 Aligned_cols=141 Identities=13% Similarity=0.092 Sum_probs=74.9
Q ss_pred ceeeeeCCeE-EEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC-C-CCcceEEEEEEeCCeEEEEEEecCCCC
Q 002158 631 TQVGQGGYGK-VYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-H-RNLVSLLGYCDEEGEQMLVYEFVPNGT 707 (958)
Q Consensus 631 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~niv~l~~~~~~~~~~~lV~E~~~~gs 707 (958)
+.|+.|+... +|+....+++.+++|....... ..+..|+.+++.+. + -.+.+++.+....+ ++|||++++..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3465565554 6677654467788876544321 22345677776663 2 33567777754443 78999998777
Q ss_pred HHHHhccCCC------------------------CCchHHHHH-------H-------------HHHHHHHHHHHhh---
Q 002158 708 LRDWLSGRTK------------------------ENLNFAMRL-------R-------------VALDSAKGILYLH--- 740 (958)
Q Consensus 708 L~~~l~~~~~------------------------~~l~~~~~~-------~-------------i~~~ia~aL~yLH--- 740 (958)
+.+++..... ..++..... . ....+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 7655432110 001111000 0 0001111222221
Q ss_pred hcCCCCeeccCCCccceEecCC----CCeEEeeeeeeccc
Q 002158 741 TEAHPPVFHRDIKASNILLDSN----LNAKVADFGLSRLA 776 (958)
Q Consensus 741 ~~~~~~iiH~Dikp~NILl~~~----~~~kl~DFGla~~~ 776 (958)
....+.++|||+.+.|||++.+ +.+.|+||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1123459999999999999875 67999999988653
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.23 E-value=0.0018 Score=70.38 Aligned_cols=157 Identities=13% Similarity=0.102 Sum_probs=86.8
Q ss_pred cChHHHHHHHcCCCC-----CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCC--cceEE
Q 002158 615 FKFKELAMATAYFSS-----STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRN--LVSLL 687 (958)
Q Consensus 615 ~~~~el~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~ 687 (958)
++.+++...-..|.. .+.|+.|....+|+....+| .+++|...... ....+..|+++++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 444555555555554 23466788889999987655 68899887531 1224556777777763212 33333
Q ss_pred EE------EEeCCeEEEEEEecCCCCHHH--------------HhccC----CC------CCchHHHHHHH---------
Q 002158 688 GY------CDEEGEQMLVYEFVPNGTLRD--------------WLSGR----TK------ENLNFAMRLRV--------- 728 (958)
Q Consensus 688 ~~------~~~~~~~~lV~E~~~~gsL~~--------------~l~~~----~~------~~l~~~~~~~i--------- 728 (958)
.. ....+..++||||++|..+.. .+|.. .. ....|.....-
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 123466799999998865311 11211 00 00123221110
Q ss_pred ---HHHHHHHHHHhhhc----CCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 729 ---ALDSAKGILYLHTE----AHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 729 ---~~~ia~aL~yLH~~----~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
...+.+.++++++. ....++|+|+.+.|||++.+..+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 01133445555532 12349999999999999987666899998765
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.14 E-value=0.0022 Score=69.83 Aligned_cols=141 Identities=14% Similarity=0.171 Sum_probs=81.7
Q ss_pred ceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCC--CcceEEEE-----EEeCCeEEEEEEec
Q 002158 631 TQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHR--NLVSLLGY-----CDEEGEQMLVYEFV 703 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~-----~~~~~~~~lV~E~~ 703 (958)
..++ |....||+....+|+.+++|...... .....+..|..+++.+... .+++++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 88889999877777789999986432 2344566788888877421 24444443 22355678999999
Q ss_pred CCCCHH-----H------H---hcc----CC---CCCchHHHH----HHHH---------------HHHHHHHHHhhhc-
Q 002158 704 PNGTLR-----D------W---LSG----RT---KENLNFAMR----LRVA---------------LDSAKGILYLHTE- 742 (958)
Q Consensus 704 ~~gsL~-----~------~---l~~----~~---~~~l~~~~~----~~i~---------------~~ia~aL~yLH~~- 742 (958)
+|..+. . . +|. .. ....++... ..+. ..+.+.++.+.+.
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875431 1 1 111 00 011221111 0010 0111122222211
Q ss_pred ---CCCCeeccCCCccceEecCCCCeEEeeeeeecc
Q 002158 743 ---AHPPVFHRDIKASNILLDSNLNAKVADFGLSRL 775 (958)
Q Consensus 743 ---~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 775 (958)
....++|+|+++.|||++ + .+.|+||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234489999999999999 4 899999987754
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.12 E-value=0.00074 Score=74.94 Aligned_cols=140 Identities=22% Similarity=0.241 Sum_probs=84.2
Q ss_pred ceeeeeCCeEEEEEEEC--------CCcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEE
Q 002158 631 TQVGQGGYGKVYKGILS--------DNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E 701 (958)
+.|..|-...+|+.... +++.+++|+... .......+.+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888899998864 247899998643 2233456678999998884 3334677777654 39999
Q ss_pred ecCCCCHHH--------------H---hccCC----CCCc-hHHHHHHHHHHHHH-------------------HHHHhh
Q 002158 702 FVPNGTLRD--------------W---LSGRT----KENL-NFAMRLRVALDSAK-------------------GILYLH 740 (958)
Q Consensus 702 ~~~~gsL~~--------------~---l~~~~----~~~l-~~~~~~~i~~~ia~-------------------aL~yLH 740 (958)
|++|.+|.. . ||... +... -+.++.++..++.. .++.|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998865421 1 12211 1111 24455555443321 223332
Q ss_pred ----hc-CCCCeeccCCCccceEecCC----CCeEEeeeeeecc
Q 002158 741 ----TE-AHPPVFHRDIKASNILLDSN----LNAKVADFGLSRL 775 (958)
Q Consensus 741 ----~~-~~~~iiH~Dikp~NILl~~~----~~~kl~DFGla~~ 775 (958)
.. ....++|+|+.+.||+++.+ +.+.|+||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 22359999999999999876 7899999998753
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.10 E-value=0.00069 Score=76.90 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=50.5
Q ss_pred ceeeeeCCeEEEEEEECC--------CcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEE
Q 002158 631 TQVGQGGYGKVYKGILSD--------NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E 701 (958)
+.|+.|-...||+....+ ++.+++|+...... ...+.+|..+++.+. +.-..++++.+.+ .+|||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 467888889999998753 57899998854211 245668999998884 3334677776543 38999
Q ss_pred ecCCCCH
Q 002158 702 FVPNGTL 708 (958)
Q Consensus 702 ~~~~gsL 708 (958)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 437
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.06 E-value=0.001 Score=71.65 Aligned_cols=71 Identities=10% Similarity=0.093 Sum_probs=45.7
Q ss_pred CceeeeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCc-ceEEEEEEeCCeEEEEEEec-CCCC
Q 002158 630 STQVGQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNL-VSLLGYCDEEGEQMLVYEFV-PNGT 707 (958)
Q Consensus 630 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~E~~-~~gs 707 (958)
.+.|+.|....+|+. +.+++|+........ ....+|+.+++.+....+ .++++++ .+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 578999999999998 568899876532111 123468888877742222 5666553 33457899999 6544
Q ss_pred H
Q 002158 708 L 708 (958)
Q Consensus 708 L 708 (958)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.03 E-value=0.00016 Score=71.94 Aligned_cols=66 Identities=14% Similarity=0.196 Sum_probs=37.2
Q ss_pred ccCCCCCcEEEeeCC-CCCC----CCChhhcCCCCCCEEeccccccccc----CccccccccccceEeccccccc
Q 002158 129 IGNISSLIFLLLNGN-KLSG----SLPDELGYLSNLNRLQVDENNITGT----IPKSFANLSRVRHLHLNNNSIG 194 (958)
Q Consensus 129 i~~l~~L~~L~Ls~n-~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 194 (958)
+.+-+.|++|+|++| .|.. .+-..+..-+.|++|+|++|+|... +...+..-+.|++|+|++|.|+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 344566777777764 5542 1233455556677777777776632 2223334455666666666665
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.96 E-value=0.00011 Score=73.04 Aligned_cols=62 Identities=19% Similarity=0.213 Sum_probs=25.9
Q ss_pred cccccccceEeccccccccc----CchhhcCCccchhhhccCCccccC----CCcccCCCCCccEEEccC
Q 002158 177 FANLSRVRHLHLNNNSIGGQ----IPSELSKLSTLIHLLVDNNNLSGN----LPPELSELPQLCILQLDN 238 (958)
Q Consensus 177 ~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~ 238 (958)
+..-+.|+.|+|++|.|... +...+..-+.|+.|+|+.|.|... +..++..-+.|++|+|++
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCC
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCC
Confidence 33334455555555554421 112222334455555555554421 222333344455555543
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.89 E-value=0.002 Score=73.54 Aligned_cols=73 Identities=14% Similarity=0.020 Sum_probs=48.1
Q ss_pred ceeeeeCCeEEEEEEECC-CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCc-ceEEEEEEeCCeEEEEEEecCCCCH
Q 002158 631 TQVGQGGYGKVYKGILSD-NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNL-VSLLGYCDEEGEQMLVYEFVPNGTL 708 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~E~~~~gsL 708 (958)
+.|+.|-...+|+....+ +..+++|+........ -...+|..+++.+...++ .++++++. + .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 568888889999998865 4788899875432111 112479999998864444 57777763 2 359999987544
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.67 E-value=0.0056 Score=67.07 Aligned_cols=66 Identities=11% Similarity=0.081 Sum_probs=43.2
Q ss_pred eCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccC---CCCcceEEEE------EEeCCeEEEEEEecCCC
Q 002158 636 GGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH---HRNLVSLLGY------CDEEGEQMLVYEFVPNG 706 (958)
Q Consensus 636 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~------~~~~~~~~lV~E~~~~g 706 (958)
|....||+....+| .+++|+...... .+|+.+++.+. -+.+++++.. ....+..++||||++|.
T Consensus 34 g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~ 106 (339)
T 3i1a_A 34 DTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAP 106 (339)
T ss_dssp CSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCC
T ss_pred ccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCC
Confidence 33579999987667 899998765432 24556665552 2324455432 23457789999999987
Q ss_pred CH
Q 002158 707 TL 708 (958)
Q Consensus 707 sL 708 (958)
.+
T Consensus 107 ~~ 108 (339)
T 3i1a_A 107 NG 108 (339)
T ss_dssp BT
T ss_pred cC
Confidence 55
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.61 E-value=0.0034 Score=58.14 Aligned_cols=57 Identities=26% Similarity=0.297 Sum_probs=45.0
Q ss_pred CEEeccCCcCC-CcCCCCCCCCCcCEEEccCCcCCCccchhccCCCCCCeEeeecccCC
Q 002158 280 YYLDLSWNHLT-GSIPSKKLSENVTTIDLSDNYLNGSILESISNLPFLQTLSLENNFLT 337 (958)
Q Consensus 280 ~~L~Ls~N~l~-~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 337 (958)
..++.+++.++ ..+|. ....+|++|+|++|+|+.+.+..|..+++|+.|+|++|++.
T Consensus 11 ~~v~Cs~~~L~~~~vP~-~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPT-AFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCS-CCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCC-CCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777775 23442 24467899999999999888899999999999999999986
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.51 E-value=0.0023 Score=71.15 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=44.7
Q ss_pred ceeeeeCCeEEEEEEECC---------CcEEEEEEeccCChhcHHHHHHHHHHHHccCCCC-cceEEEEEEeCCeEEEEE
Q 002158 631 TQVGQGGYGKVYKGILSD---------NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRN-LVSLLGYCDEEGEQMLVY 700 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lV~ 700 (958)
+.|+.|..-.+|+....+ ++.+++|+...... .......|.++++.+...+ ..++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457778888999998754 26888888764321 1112357888888874333 45777654 2 36899
Q ss_pred EecCCCCH
Q 002158 701 EFVPNGTL 708 (958)
Q Consensus 701 E~~~~gsL 708 (958)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 444
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=96.37 E-value=0.0012 Score=45.80 Aligned_cols=32 Identities=22% Similarity=0.479 Sum_probs=24.3
Q ss_pred CCCCcccceeeeehhHHHHHHHHHHHHHHHHH
Q 002158 554 QSKGISGGILAAIVVGAVASAVAITAAVTLLV 585 (958)
Q Consensus 554 ~~~~~~~~~~~~ivv~~~~~~~~i~~~~~~~~ 585 (958)
.+++.++++++++++|+++.++++++++++++
T Consensus 4 ~~~~ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 4 VSRGLTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp SSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 45678999999999999887776665555444
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.04 E-value=0.011 Score=65.83 Aligned_cols=140 Identities=18% Similarity=0.189 Sum_probs=82.6
Q ss_pred ceeeeeCCeEEEEEEECC--------CcEEEEEEeccCChh-----------cHH-------HHHHHHHHHHccC-CCCc
Q 002158 631 TQVGQGGYGKVYKGILSD--------NTTVAIKRAEEGSLQ-----------GQN-------EFLTEIKLLSRLH-HRNL 683 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~~~-------~~~~E~~~l~~l~-H~ni 683 (958)
+.|..|-...+|+...++ ++.|.+++....... +++ ....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778999988753 367888887543211 111 2235888888884 4446
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCHHH--H---------------hccCC----CCCc-hHHHHHHHHHHHH--------
Q 002158 684 VSLLGYCDEEGEQMLVYEFVPNGTLRD--W---------------LSGRT----KENL-NFAMRLRVALDSA-------- 733 (958)
Q Consensus 684 v~l~~~~~~~~~~~lV~E~~~~gsL~~--~---------------l~~~~----~~~l-~~~~~~~i~~~ia-------- 733 (958)
.++++++..+ +|+||+++.+|.. + +|... .... -+.+..++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6788776532 9999998755421 1 12111 1111 2233333333221
Q ss_pred --------------HHHH----Hhhhc-CCCCeeccCCCccceEecCC------CCeEEeeeeeec
Q 002158 734 --------------KGIL----YLHTE-AHPPVFHRDIKASNILLDSN------LNAKVADFGLSR 774 (958)
Q Consensus 734 --------------~aL~----yLH~~-~~~~iiH~Dikp~NILl~~~------~~~kl~DFGla~ 774 (958)
+-+. +|... ....++|+|+.+.||+++.+ +.+.|+||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 23222 22359999999999999887 789999998775
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.01 E-value=0.021 Score=56.97 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=65.6
Q ss_pred CCHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeecccccCCCCCCc
Q 002158 706 GTLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSRLAPVLDDEGTM 785 (958)
Q Consensus 706 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 785 (958)
-+|.+.|...+ .++++++++.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-----------
Confidence 37999998654 4699999999999999998776221111 1222457999999999998764 2111
Q ss_pred cceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCC
Q 002158 786 PTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQ 831 (958)
Q Consensus 786 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~ 831 (958)
.....+.|||... ...+.+.=|||+|+++|.-+--..
T Consensus 98 --------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 --------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp -----------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred --------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 0122366888753 234567889999999999887433
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.11 E-value=0.043 Score=61.65 Aligned_cols=73 Identities=10% Similarity=0.088 Sum_probs=48.6
Q ss_pred ceeeeeCCeEEEEEEECC--------CcEEEEEEeccCChhcHHHHHHHHHHHHccC-CCCcceEEEEEEeCCeEEEEEE
Q 002158 631 TQVGQGGYGKVYKGILSD--------NTTVAIKRAEEGSLQGQNEFLTEIKLLSRLH-HRNLVSLLGYCDEEGEQMLVYE 701 (958)
Q Consensus 631 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lV~E 701 (958)
+.+..|-...+|+....+ ++.+++|+....... .....+|.++++.+. +.-..++++.+. -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 457777788999998753 578999987543211 112347888888884 333566776442 278999
Q ss_pred ecCCCCH
Q 002158 702 FVPNGTL 708 (958)
Q Consensus 702 ~~~~gsL 708 (958)
|++|.+|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.26 E-value=0.028 Score=40.05 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=15.7
Q ss_pred ccceeeeehhHHHHHHHHHHHHHHHHHHhhhh
Q 002158 559 SGGILAAIVVGAVASAVAITAAVTLLVMRRHA 590 (958)
Q Consensus 559 ~~~~~~~ivv~~~~~~~~i~~~~~~~~~~r~~ 590 (958)
....|++.++|.+++++++.+.++++++||+.
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 34455555555555554444444444444433
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.76 E-value=0.052 Score=38.84 Aligned_cols=29 Identities=28% Similarity=0.431 Sum_probs=13.6
Q ss_pred ceeeeehhHHHHHHHHHHHHHHHHHHhhh
Q 002158 561 GILAAIVVGAVASAVAITAAVTLLVMRRH 589 (958)
Q Consensus 561 ~~~~~ivv~~~~~~~~i~~~~~~~~~~r~ 589 (958)
..||+.++|.++++++++++++++++||+
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 34555555544444444444444444443
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.25 E-value=0.71 Score=51.40 Aligned_cols=29 Identities=31% Similarity=0.448 Sum_probs=24.9
Q ss_pred eeccCCCccceEe------cCCCCeEEeeeeeecc
Q 002158 747 VFHRDIKASNILL------DSNLNAKVADFGLSRL 775 (958)
Q Consensus 747 iiH~Dikp~NILl------~~~~~~kl~DFGla~~ 775 (958)
++|+|+.+.|||+ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6899999999999 4567799999998764
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.12 E-value=0.18 Score=35.88 Aligned_cols=28 Identities=25% Similarity=0.432 Sum_probs=13.1
Q ss_pred ceeeeehhHHHHHHHHHHHHHHHHHHhhh
Q 002158 561 GILAAIVVGAVASAVAITAAVTLLVMRRH 589 (958)
Q Consensus 561 ~~~~~ivv~~~~~~~~i~~~~~~~~~~r~ 589 (958)
..++++++| +.+++++.+.++++++||+
T Consensus 12 ~~Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 12 TSIISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 346666777 3333333333344444443
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.32 E-value=6.1 Score=39.23 Aligned_cols=115 Identities=10% Similarity=0.101 Sum_probs=78.7
Q ss_pred CCCCcceEEEEEEeCCeEEEEEEecCCC-CHHHHhccCCCCCchHHHHHHHHHHHHHHHHHhhhcCCCCeeccCCCccce
Q 002158 679 HHRNLVSLLGYCDEEGEQMLVYEFVPNG-TLRDWLSGRTKENLNFAMRLRVALDSAKGILYLHTEAHPPVFHRDIKASNI 757 (958)
Q Consensus 679 ~H~niv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NI 757 (958)
.||++++. .+-..++.+.+.|+.-+.+ +... ++ .++...+++++.+++...++++. =+|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-----~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-----SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-----GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-----hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceE
Confidence 68888876 5666666666666554322 2222 32 26788999999999988866654 36778999999
Q ss_pred EecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCC
Q 002158 758 LLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPIS 834 (958)
Q Consensus 758 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~ 834 (958)
+++.++.+++.-.|+-..+++.. +.+|- =.-.+=+++..+++++..|.
T Consensus 111 ~f~~~~~p~i~~RGik~~l~P~~-------------------~~ee~----------fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVDPLP-------------------VSEAE----------FLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTBSCCC-------------------CCHHH----------HHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCCCCCC-------------------CCHHH----------HHHHHHHHHHHHHcCCCCHH
Confidence 99999999999888743221100 11221 24567788999999988874
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.74 E-value=0.29 Score=55.61 Aligned_cols=61 Identities=8% Similarity=0.070 Sum_probs=18.2
Q ss_pred CCceeeeeCCeEEEEEEECC-CcEEEE------EEeccCC--hhcHHHHHHHHHHHHccCCCCcceEEEEEEe
Q 002158 629 SSTQVGQGGYGKVYKGILSD-NTTVAI------KRAEEGS--LQGQNEFLTEIKLLSRLHHRNLVSLLGYCDE 692 (958)
Q Consensus 629 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 692 (958)
..+.|| ||.||+|.+.. ..+||| |..+... ......|.+|..+++..+|+|+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345566 99999999864 468999 7766532 2233568899999999999999999887643
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.56 E-value=11 Score=37.63 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=78.1
Q ss_pred CCCCcceEEEEEEeCCeEEEEEEecCCC-CHHHHhccCCCCCchHHHHHHHHHHHHHHHH-HhhhcCCCCeeccCCCccc
Q 002158 679 HHRNLVSLLGYCDEEGEQMLVYEFVPNG-TLRDWLSGRTKENLNFAMRLRVALDSAKGIL-YLHTEAHPPVFHRDIKASN 756 (958)
Q Consensus 679 ~H~niv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~-yLH~~~~~~iiH~Dikp~N 756 (958)
.||++ -...-.+++.+.+.++.-+++ +.. .++ .++...+++++.+++.... +++. -+|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCce
Confidence 68887 444446677777777765443 333 332 2678889999999998877 6654 4677899999
Q ss_pred eEecCCCCeEEeeeeeecccccCCCCCCccceeeeeccCCCCccChhhhccCCCCCcchhhhHHHHHHHHHhCCCCCC
Q 002158 757 ILLDSNLNAKVADFGLSRLAPVLDDEGTMPTHVSTIVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMQPIS 834 (958)
Q Consensus 757 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~S~Gv~l~elltG~~P~~ 834 (958)
+++|.++.+++.-.|+-..+++.. +.+|-+ .-.+=+++..++.++..|.
T Consensus 115 L~f~~~~~p~i~hRGi~~~lpP~e-------------------~~ee~f----------l~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESLPPDE-------------------WDDERL----------LREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTBSSCS-------------------CCHHHH----------HHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccCCCCC-------------------CCHHHH----------HHHHHHHHHHHHcCCCCHH
Confidence 999999999999888743221100 122222 4567788888998888774
No 455
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=70.48 E-value=2 Score=28.61 Aligned_cols=23 Identities=48% Similarity=0.664 Sum_probs=16.5
Q ss_pred cccceeeeehhHHHHHHHHHHHH
Q 002158 558 ISGGILAAIVVGAVASAVAITAA 580 (958)
Q Consensus 558 ~~~~~~~~ivv~~~~~~~~i~~~ 580 (958)
.++++++|++++.++..+++.++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~ 26 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALA 26 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHH
Confidence 46788899999888776654433
No 456
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=65.00 E-value=6.5 Score=28.07 Aligned_cols=34 Identities=12% Similarity=0.071 Sum_probs=28.1
Q ss_pred ceeeeehhHHHHHHHHHHHHHHHHHHhhhhhccc
Q 002158 561 GILAAIVVGAVASAVAITAAVTLLVMRRHARYQH 594 (958)
Q Consensus 561 ~~~~~ivv~~~~~~~~i~~~~~~~~~~r~~~~~~ 594 (958)
.-..+|+.|++.++++++++++.++...++|.++
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 5777888888888888888888888888887654
No 457
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=57.10 E-value=9.7 Score=27.14 Aligned_cols=36 Identities=6% Similarity=0.032 Sum_probs=27.1
Q ss_pred cceeeeehhHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 002158 560 GGILAAIVVGAVASAVAITAAVTLLVMRRHARYQHS 595 (958)
Q Consensus 560 ~~~~~~ivv~~~~~~~~i~~~~~~~~~~r~~~~~~~ 595 (958)
+.-..+|+.|++.++++++++.+.++...++|.++.
T Consensus 6 ~s~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 6 HARTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred CCCcceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 455666777777778888888888888888876543
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=56.69 E-value=16 Score=38.79 Aligned_cols=132 Identities=14% Similarity=0.118 Sum_probs=70.1
Q ss_pred eeeCCeEEEEEEECCCcEEEEEEeccCChhcHHHHHHHHHHHHccCCCCcceEEEEE-----------------------
Q 002158 634 GQGGYGKVYKGILSDNTTVAIKRAEEGSLQGQNEFLTEIKLLSRLHHRNLVSLLGYC----------------------- 690 (958)
Q Consensus 634 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~----------------------- 690 (958)
-.|. +-||.+.. ++..|+||... ....+.|..++...-.+.-|+..-+ .+.
T Consensus 78 ~~Gs-tgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv-~~~~~E~~e~~~~L~~~~~~~~~l~~ 151 (342)
T 1cja_A 78 EKGT-EGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVV-SSNSEEGTNMLECLAAIDKSFRVITT 151 (342)
T ss_dssp CSTT-SCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEE-ESSSHHHHHHHHHHHHHCSSSCHHHH
T ss_pred cCCC-CCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEE-eeCcHHHHHHHHHHHHhhhhhHHHHH
Confidence 4454 45665555 57789999442 2233445556655555666663222 111
Q ss_pred EeCCeEEEEEEecCCCCHHHHhccCCCCCchHHHHHHHHHHH--HHHHHHhhhc-CCCCeec-cCCCccceEecCCCC-e
Q 002158 691 DEEGEQMLVYEFVPNGTLRDWLSGRTKENLNFAMRLRVALDS--AKGILYLHTE-AHPPVFH-RDIKASNILLDSNLN-A 765 (958)
Q Consensus 691 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i--a~aL~yLH~~-~~~~iiH-~Dikp~NILl~~~~~-~ 765 (958)
......+++|||++|..|.+.-+......+..+ .+.++ .-++.++..+ .+.|.++ .--.+.|||+++++. +
T Consensus 152 l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~ 227 (342)
T 1cja_A 152 LANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATV 227 (342)
T ss_dssp HTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCE
T ss_pred hhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeE
Confidence 012256799999987666543221101112222 22222 2234444443 3334433 125789999977554 8
Q ss_pred EEeeeeeecc
Q 002158 766 KVADFGLSRL 775 (958)
Q Consensus 766 kl~DFGla~~ 775 (958)
.++|-+++..
T Consensus 228 ~~IDhn~af~ 237 (342)
T 1cja_A 228 VPIDSKIIPL 237 (342)
T ss_dssp EECSCCCCCC
T ss_pred EEEcCCcccc
Confidence 8999998753
No 459
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=56.13 E-value=3.6 Score=28.88 Aligned_cols=13 Identities=15% Similarity=0.360 Sum_probs=5.3
Q ss_pred ehhHHHHHHHHHH
Q 002158 566 IVVGAVASAVAIT 578 (958)
Q Consensus 566 ivv~~~~~~~~i~ 578 (958)
|++++++++++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 4444444443333
No 460
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=49.62 E-value=1.4 Score=29.69 Aligned_cols=24 Identities=38% Similarity=0.506 Sum_probs=9.2
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHhh
Q 002158 564 AAIVVGAVASAVAITAAVTLLVMRR 588 (958)
Q Consensus 564 ~~ivv~~~~~~~~i~~~~~~~~~~r 588 (958)
++.++| +.+++++.+.+.++++||
T Consensus 11 aagVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 11 IATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred HHHHHH-HHHHHHHHHHhheEEeec
Confidence 334444 333333333333444433
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=42.72 E-value=12 Score=28.78 Aligned_cols=21 Identities=24% Similarity=0.355 Sum_probs=13.5
Q ss_pred ehhHHHHHHHHHHHHHHHHHH
Q 002158 566 IVVGAVASAVAITAAVTLLVM 586 (958)
Q Consensus 566 ivv~~~~~~~~i~~~~~~~~~ 586 (958)
|++|.+++.++++.+.+++.+
T Consensus 12 ivlGg~~~lll~~glcI~ccv 32 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSV 32 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHhh
Confidence 567777776666666666444
No 462
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=33.57 E-value=1.9e+02 Score=33.29 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=50.7
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCHHHHhccC----------CC---CC--chHHHHHHHHHHHHH--HHHHhhhcCCCC
Q 002158 684 VSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGR----------TK---EN--LNFAMRLRVALDSAK--GILYLHTEAHPP 746 (958)
Q Consensus 684 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~----------~~---~~--l~~~~~~~i~~~ia~--aL~yLH~~~~~~ 746 (958)
++.|.+........+ .|++++.++.+.+... .. .. ..+..+..++...|- .+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 455566655555554 6788776665554321 11 11 124445555555443 3555532
Q ss_pred eeccCCCccceEecCCCCeEEeeeeeec
Q 002158 747 VFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 747 iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
=+|=.++|||++.+|.+.=+|||.+-
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 25778999999999999999999863
No 463
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=31.78 E-value=1.6e+02 Score=36.47 Aligned_cols=60 Identities=20% Similarity=0.226 Sum_probs=37.1
Q ss_pred CHHHHhccCCCCCchHHHH-HHHHHHHHH--HHHHhhhcCCCCeeccCCCccceEecCCCCeEEeeeeeec
Q 002158 707 TLRDWLSGRTKENLNFAMR-LRVALDSAK--GILYLHTEAHPPVFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 707 sL~~~l~~~~~~~l~~~~~-~~i~~~ia~--aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
.|.+|+.... ....+..+ ..++...|- .+.|+=. =+|=.++|||+|.+|.+.=+|||.+-
T Consensus 899 ~L~~~f~~~~-~~~~~~~ar~nF~~S~A~ysvv~YiLg-------igDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 899 TLHQWLKDKN-KGEIYDAAIDLFTRSCAGYCVATFILG-------IGDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp HHHHHHHTTS-CTTSHHHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHHhcC-ChHHHHHHHHHHHHHhhhhhheEEEEe-------ecCCCCcceEEeCCCCEEEEeehhhh
Confidence 3555554433 22334433 344444432 3555532 25778999999999999999999863
No 464
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=31.40 E-value=2.9e+02 Score=32.35 Aligned_cols=83 Identities=18% Similarity=0.138 Sum_probs=48.5
Q ss_pred ceEEEEEEeCCeEEEEEEecCCCCHHHHhccCC----------CCC---c--hHHHHHHHHHHHH--HHHHHhhhcCCCC
Q 002158 684 VSLLGYCDEEGEQMLVYEFVPNGTLRDWLSGRT----------KEN---L--NFAMRLRVALDSA--KGILYLHTEAHPP 746 (958)
Q Consensus 684 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~~---l--~~~~~~~i~~~ia--~aL~yLH~~~~~~ 746 (958)
++.|.+........+ .|++++.++.+++...+ ... + ....+..++..+| ..+.|+=.
T Consensus 476 i~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILG----- 549 (696)
T 2x6h_A 476 LTPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLG----- 549 (696)
T ss_dssp CCCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred EeccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHcc-----
Confidence 344555544444443 47777666666554321 110 1 1233445555444 23445422
Q ss_pred eeccCCCccceEecCCCCeEEeeeeeec
Q 002158 747 VFHRDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 747 iiH~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
=+|=.++||||+.+|.+.=+|||.+-
T Consensus 550 --lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 --VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp --CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred --CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 26889999999999999999999863
No 465
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=30.63 E-value=28 Score=28.40 Aligned_cols=16 Identities=13% Similarity=0.302 Sum_probs=6.7
Q ss_pred eehhHHHHHHHHHHHH
Q 002158 565 AIVVGAVASAVAITAA 580 (958)
Q Consensus 565 ~ivv~~~~~~~~i~~~ 580 (958)
+|+.|++++++++.++
T Consensus 12 ~Iv~gvi~gilliGll 27 (79)
T 2knc_B 12 VVLLSVMGAILLIGLA 27 (79)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 3444444444433333
No 466
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=29.25 E-value=64 Score=27.44 Aligned_cols=37 Identities=16% Similarity=0.148 Sum_probs=15.0
Q ss_pred hhhcCCCCCCEEecccccccccCccccccccccceEec
Q 002158 151 DELGYLSNLNRLQVDENNITGTIPKSFANLSRVRHLHL 188 (958)
Q Consensus 151 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 188 (958)
..|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 33444444444444432 22233334444444444444
No 467
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=27.32 E-value=1.4e+02 Score=37.11 Aligned_cols=25 Identities=24% Similarity=0.247 Sum_probs=22.8
Q ss_pred cCCCccceEecCCCCeEEeeeeeec
Q 002158 750 RDIKASNILLDSNLNAKVADFGLSR 774 (958)
Q Consensus 750 ~Dikp~NILl~~~~~~kl~DFGla~ 774 (958)
+|=.++|||+|.+|.+.=+|||.+-
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~f 964 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHIL 964 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred CCCCCccEEEecCCCEEEEeehhhh
Confidence 6889999999999999999999763
No 468
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=25.16 E-value=82 Score=22.40 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=20.9
Q ss_pred eeeehhHHHHHHHHHHHHHHHHHHhhhhhccc
Q 002158 563 LAAIVVGAVASAVAITAAVTLLVMRRHARYQH 594 (958)
Q Consensus 563 ~~~ivv~~~~~~~~i~~~~~~~~~~r~~~~~~ 594 (958)
-...+++.++++++++++.+.+....++|.++
T Consensus 10 ~~~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 10 PLTSIISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred cccchHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 34456777777665556666667777777654
No 469
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=23.93 E-value=76 Score=21.76 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=16.2
Q ss_pred ccceeeeehhHHHHHHHHHHHH-HHHHHHhh
Q 002158 559 SGGILAAIVVGAVASAVAITAA-VTLLVMRR 588 (958)
Q Consensus 559 ~~~~~~~ivv~~~~~~~~i~~~-~~~~~~~r 588 (958)
+.+.-.+.+.|+++.+++.+++ ..+.++..
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 4445566677777666554444 34444443
No 470
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=28.27 E-value=18 Score=25.35 Aligned_cols=19 Identities=32% Similarity=0.548 Sum_probs=10.4
Q ss_pred ccceeeeehhHHHHHHHHH
Q 002158 559 SGGILAAIVVGAVASAVAI 577 (958)
Q Consensus 559 ~~~~~~~ivv~~~~~~~~i 577 (958)
+.++++++.++.++++.++
T Consensus 15 srga~iGL~v~gVai~~vI 33 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVI 33 (43)
Confidence 4456666666655544433
Done!