Your job contains 1 sequence.
>002159
MCVCISTPFFLIQATRVFEVCIIDSMVERRKPLVLSSTKLLINSVLSSSRRVTGENLVGD
DVSPSLQLPAGILRFSKDKIDISDAKFASLDDSALLGLSTCVLKQLSVTSGSLVLVKNAE
TTKQRIAQVVVLDPPTTRKQVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLDRQVAYLSP
LLAFNLDLHISSLKFLVHQGKEVLESLFIAKVDDGTSGQDGKASLIKLGLQSVGQLPKYA
SHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINW
NCSSMICIPCRQRLHRRSDNIIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDL
LISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR
LGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPND
QVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTI
RRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHAL
VADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRN
ASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTG
KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA
PARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLL
YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR
KVLSSDSNSDSSRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSSN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002159
(958 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 3011 6.3e-314 1
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 1020 7.1e-133 5
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 1007 1.9e-122 3
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 1007 1.9e-122 3
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 1006 1.7e-121 3
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 1013 1.9e-120 3
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 1005 8.2e-120 3
ZFIN|ZDB-GENE-081104-252 - symbol:pex6 "peroxisomal bioge... 996 1.6e-117 2
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ... 989 8.6e-117 2
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 995 8.7e-115 2
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 1000 4.8e-114 2
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 1003 2.6e-113 2
SGD|S000005273 - symbol:PEX6 "AAA-peroxin" species:4932 "... 871 4.6e-109 4
CGD|CAL0005974 - symbol:PEX6 species:5476 "Candida albica... 920 1.2e-102 3
UNIPROTKB|Q59ZE6 - symbol:PEX6 "Likely peroxisomal biogen... 920 1.2e-102 3
UNIPROTKB|G4NBI6 - symbol:MGG_00529 "Peroxisomal biogenes... 899 1.4e-101 4
POMBASE|SPAC17A5.01 - symbol:pex6 "peroxin-6 (predicted)"... 888 8.8e-96 2
ASPGD|ASPL0000034610 - symbol:pexF species:162425 "Emeric... 915 5.7e-91 1
FB|FBgn0033564 - symbol:Pex6 "Peroxin 6" species:7227 "Dr... 818 1.3e-90 2
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 738 1.4e-80 2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 739 1.7e-80 2
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 734 2.8e-80 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 735 4.6e-80 2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 735 4.6e-80 2
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 735 4.6e-80 2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 735 4.6e-80 2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 735 4.6e-80 2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 735 4.6e-80 2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 735 4.6e-80 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 730 1.5e-79 2
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 720 2.5e-79 2
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 686 3.1e-79 3
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 718 5.2e-79 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 724 6.6e-79 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 721 8.4e-79 2
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 689 1.7e-78 3
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 689 1.7e-78 3
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 707 7.5e-78 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 708 9.5e-78 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 672 1.5e-77 3
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 672 1.5e-77 3
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 711 1.5e-77 2
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 703 2.0e-77 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 706 3.2e-77 2
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 685 6.6e-77 2
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 734 8.5e-77 2
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 692 5.5e-76 3
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 690 5.9e-76 2
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 690 5.9e-76 2
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 731 4.1e-75 2
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 684 1.4e-74 2
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 684 1.4e-74 2
WB|WBGene00004195 - symbol:prx-6 species:6239 "Caenorhabd... 685 1.4e-70 2
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 641 2.2e-70 2
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 648 5.4e-70 2
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 577 1.3e-69 3
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 588 8.7e-65 3
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 577 1.4e-64 4
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 658 1.9e-64 1
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 571 2.4e-64 4
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 561 5.5e-64 4
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 597 1.1e-63 4
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 576 1.8e-63 3
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 602 2.3e-63 3
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 601 1.2e-62 4
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 601 1.2e-62 4
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 571 1.5e-62 3
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 564 2.8e-62 4
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 577 3.0e-61 2
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 629 4.1e-61 1
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 555 4.4e-61 4
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 578 2.4e-60 3
UNIPROTKB|E9PE75 - symbol:PEX1 "Peroxisome biogenesis fac... 575 9.5e-60 3
UNIPROTKB|E1BY08 - symbol:PEX1 "Uncharacterized protein" ... 597 3.5e-59 3
UNIPROTKB|O43933 - symbol:PEX1 "Peroxisome biogenesis fac... 575 3.9e-59 2
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 564 7.4e-59 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 564 7.4e-59 2
MGI|MGI:1918632 - symbol:Pex1 "peroxisomal biogenesis fac... 592 1.8e-58 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 572 7.7e-58 2
DICTYBASE|DDB_G0289867 - symbol:pex1 "peroxisomal biogene... 611 9.2e-58 2
UNIPROTKB|E2RLT2 - symbol:PEX1 "Uncharacterized protein" ... 575 1.4e-57 2
UNIPROTKB|E2RCK9 - symbol:PEX1 "Uncharacterized protein" ... 575 2.4e-57 2
TAIR|locus:2159557 - symbol:PEX1 "peroxisome 1" species:3... 553 5.3e-57 3
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 608 5.6e-57 1
UNIPROTKB|I3LPI5 - symbol:PEX1 "Uncharacterized protein" ... 555 7.7e-57 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 527 1.1e-56 2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 554 2.2e-56 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 558 7.9e-56 2
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 465 9.6e-56 3
CGD|CAL0002247 - symbol:PEX1 species:5476 "Candida albica... 583 3.2e-55 3
UNIPROTKB|Q5AH73 - symbol:PEX1 "Likely peroxisomal biogen... 583 3.2e-55 3
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 534 1.2e-54 3
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 582 1.7e-54 1
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 582 1.7e-54 1
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 496 3.0e-54 3
ZFIN|ZDB-GENE-070530-1 - symbol:pex1 "peroxisome biogenes... 547 6.6e-54 2
RGD|1559939 - symbol:Pex1 "peroxisomal biogenesis factor ... 582 8.9e-53 2
UNIPROTKB|G4MQP9 - symbol:MGG_09299 "Peroxisome biosynthe... 567 9.3e-53 3
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 530 1.0e-52 2
UNIPROTKB|E1BPU3 - symbol:PEX1 "Uncharacterized protein" ... 577 1.2e-52 1
WARNING: Descriptions of 622 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 3011 (1065.0 bits), Expect = 6.3e-314, P = 6.3e-314
Identities = 627/946 (66%), Positives = 727/946 (76%)
Query: 26 MVERRKPLVLSSTKLLINSVLSSSR--RVTGENLV---GDDVSPSLQLPAGILRFSKDKI 80
MVERR PLVLSST+ + SVL+SS+ G+ ++ GD + + +L AGILR+ KD
Sbjct: 1 MVERRNPLVLSSTRSTLRSVLNSSQPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE 60
Query: 81 DISDAKFXXXXXXXXXXXXTCVLKQLSVTSGSLVLVKNAETTKQRIAQVVVLDPP-TTRK 139
++SDAK T +LK+LS+ SGSLV+VKN E QR+AQVVVLDPP TT +
Sbjct: 61 NVSDAKLDSLDDSALVGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLE 120
Query: 140 QVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLDRQVAYLSPLLAFNLDLHISSLKFLVHQ 199
V S TML FP+ L +LLD++VAYLSP+LAFNL LHIS LK LVH+
Sbjct: 121 DASLTQVPVSDSLHTMLVFPTYDLM--GQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHR 178
Query: 200 GKEVLESLFIAKVDD---GTSGQDGKASLIKLGLQSVGQLPKYASHLRVSFVKIPECGTL 256
G VLE F AK D+ G S +DG S I L L+ V Q+P YASHLRVSFVKIPECGT+
Sbjct: 179 GNGVLEKYFEAKCDEEFIGKSAEDG--SKIGLDLEPVSQVPGYASHLRVSFVKIPECGTI 236
Query: 257 ESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHR 316
SLK +S+ EAE+RQ ID AL YF DR L+RGD+F + I+WNC S IC PC QRL
Sbjct: 237 PSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCS 296
Query: 317 RSDNIIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTV 376
SD+ IYFKV+A+EPS E LRVN ++TALVLGG++ S LPPDLL+ S +PLQ +TV
Sbjct: 297 ESDDYIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETV 356
Query: 377 KILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
ILAS+L+P LCPS L+ K RVAVLLHG+PGCGKRTVV+YVARRLG+HVVE+SCH+L+AS
Sbjct: 357 NILASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLAS 416
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFT 496
SERKTS ALAQ FN A+ YSPTILLLR FDVF+NL S + D+VG+S E+ASVIRE T
Sbjct: 417 SERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELT 476
Query: 497 EPSAEDE---DEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPL 553
EP + + +E+S+ F E+ K QVLL+A+A+S+EG+ PTIRRCFSHEI MG L
Sbjct: 477 EPVSNGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSL 536
Query: 554 TEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSN 613
++QR EMLSQ LQ VS+ + S+EF+K ++GQTSGF+PRDL ALVADAGANL
Sbjct: 537 NDEQRSEMLSQSLQGVSQFLN-ISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQE 595
Query: 614 SEVDKNEPGESDLTAKVAHNDNSSIAATQVM-GKEDLVKAMERSKKRNASALGAPKVPNV 672
SE K DL H + +T+ + KED KA++RSKKRNASALGAPKVPNV
Sbjct: 596 SETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNV 655
Query: 673 KWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 732
KW+DVGGLEDVK SILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC
Sbjct: 656 KWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATEC 715
Query: 733 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 792
SLNFLSVKGPELINMYIGESEKNVRDIF+KARSARPCVIFFDELDSLAPARGASGDSGGV
Sbjct: 716 SLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGV 775
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
MDRVVSQMLAEIDGL+DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN+D SYRE
Sbjct: 776 MDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRE 835
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXX 912
RVLKALTRKFKL EDVSLYS+AKKCP FTGADMYALCADAWF AAKRKV
Sbjct: 836 RVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPT 895
Query: 913 RIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSSN 958
D DSVVVEY DF+K + +LSPSLS+ ELKKYE+LRDQF+G S+
Sbjct: 896 EEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRSS 941
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 1020 (364.1 bits), Expect = 7.1e-133, Sum P(5) = 7.1e-133
Identities = 206/434 (47%), Positives = 294/434 (67%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++ +S + L +R F HEI++ E QR ++L L + L D G+ +K
Sbjct: 780 LIITVTVNSMDELSNKVRNWFKHEITLNSPDENQRFKILKYLTK---NLPIDIGNTVSIK 836
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
++ +T+ F+ +L AL+ + N +++ S + ++ +N V
Sbjct: 837 NLSIRTASFLNSNLRALIQRSSINALKRVLSI---QQMMNDEIKPIEIYN-----CGFLV 888
Query: 644 MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
MG +D+ K++ ++ +S++GAPK+PNV W+DVGGL +VK I+DT+QLPL H LF+S
Sbjct: 889 MG-DDIQKSLSEMQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS 947
Query: 704 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 763
G+ KRSG+LL+GPPGTGKTLLAKA+ATECSLNFLSVKGPELINMYIGESEKN+R+IF KA
Sbjct: 948 GIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKA 1007
Query: 764 RSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP 823
R A+PCVIFFDELDSLAP+RG DSGGVMDRVVSQ+LAE+DG+ SS D+FIIGA+NRP
Sbjct: 1008 RQAKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSS-DVFIIGATNRP 1066
Query: 824 DLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTG 883
DL+D +L+RPGR D+LLY+G++S+ + ++L+ALTRKF L +DV L + + CP N TG
Sbjct: 1067 DLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTG 1126
Query: 884 ADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
AD YAL +DA +A ++ +Q ++V + F+K + L PS+S+ EL
Sbjct: 1127 ADFYALASDAMSNAFHERITASINGEINEE-EQNQKLIVYQNHFIKAVNSLVPSVSLDEL 1185
Query: 944 KKYELLRDQFEGSS 957
+ Y ++ QF G++
Sbjct: 1186 EYYHKVQKQFSGNN 1199
Score = 201 (75.8 bits), Expect = 7.1e-133, Sum P(5) = 7.1e-133
Identities = 51/206 (24%), Positives = 96/206 (46%)
Query: 363 SGSNDFVPLQ---GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVAR 419
S N VPL+ + K + +++P L S F +LL+G G GKRT++ VA+
Sbjct: 630 SKDNSMVPLELIYENEFKTIVDLISPFLMGDKFSFDFNCTLLLNGPQGVGKRTLLNRVAK 689
Query: 420 RLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPN 479
++GIHV E C+ L E K + A + +PT+L+L++F+V +
Sbjct: 690 QMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTLLILKNFEVLEQTAQSMQQEK 749
Query: 480 DQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPT 539
+ LS + +++++ + + + + +P+ ++ +S + L
Sbjct: 750 KESNLSQTLINILKDINDSNTSNINSNK---YPL-----------IITVTVNSMDELSNK 795
Query: 540 IRRCFSHEISMGPLTEQQRVEMLSQL 565
+R F HEI++ E QR ++L L
Sbjct: 796 VRNWFKHEITLNSPDENQRFKILKYL 821
Score = 51 (23.0 bits), Expect = 7.1e-133, Sum P(5) = 7.1e-133
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 168 MELLDRQVAYLSPLLAFNLDLHISSLKFLVHQGKEVLESLF 208
++L D QV YL P+ FNL++ + FL E++ + F
Sbjct: 432 LKLKD-QVLYLPPISIFNLNIDYKN--FLKLSNYEIISNQF 469
Score = 45 (20.9 bits), Expect = 7.1e-133, Sum P(5) = 7.1e-133
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 24 DSMVERRKPLVLSSTKLLINSVLSSSRRVTGENL-VGDDVSPSLQLPA--GILRFSKDKI 80
D+ ++ L LS+ +I+ +++ S T +N +GD + P+ GIL +K I
Sbjct: 299 DNKLKLNNNLRLSN--FIIHPIINISNNTTTKNEDIGDSNNLFHFTPSSKGILSNNKKFI 356
Query: 81 DISDAK-------FXXXXXXXXXXXXTCV-----LKQLSVTSGSLVLVKN 118
+IS K F C+ LK L++ +GS + +KN
Sbjct: 357 NISQLKSIPTEIDFEFDISKEYDYLVDCLVSLNTLKSLNLFNGSWIKIKN 406
Score = 42 (19.8 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 102 VLKQLSVTSGSLVLVKNAETTKQ 124
VL+Q S ++ +L+++KN E +Q
Sbjct: 718 VLEQASNSTPTLLILKNFEVLEQ 740
Score = 40 (19.1 bits), Expect = 7.1e-133, Sum P(5) = 7.1e-133
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 278 LHNYFEVDRYLARGDVFSVC---------INWNCSSMICIPCRQRLHRRSDNIIYFKVVA 328
L YF+ R L + D+ + IN N S+ + ++N++YFKV
Sbjct: 520 LEKYFQKKRLLKQNDIIVISTKVNNEEELINSNNSNNNNNYNNNNNNNNNNNLVYFKVEI 579
Query: 329 VEPSE------ETVLRVNCTKTALVLGGSIPSALP 357
+ ++ + ++ T+++ GS S +P
Sbjct: 580 ILCNQFENINGNQIYLIDKNTTSIIQEGSSNSMVP 614
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 1007 (359.5 bits), Expect = 1.9e-122, Sum P(3) = 1.9e-122
Identities = 213/431 (49%), Positives = 297/431 (68%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++VA + LP +R F HE+ + L+E QR+ +L L + L G E +
Sbjct: 567 LMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQRLSVLQAL---TAHLP--LGQEVNLS 621
Query: 584 DIIGQTSGFMPRDLHALVADAG-ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQ 642
+ + +GF+ DL+AL+ A A R + + +E E +L A A
Sbjct: 622 QLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCA----------AGFP 671
Query: 643 VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
++ ED +A+++ + ++ A+GAPK+P+V W DVGGL+DVKK IL+T+QLPL H +L S
Sbjct: 672 LLA-EDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS 730
Query: 703 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +
Sbjct: 731 LGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFAR 789
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+NR
Sbjct: 790 ARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNR 848
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
PDL+DPALLRPGRFDKL++VG + D + + RVL A+TRKFKL VSL ++ CPP T
Sbjct: 849 PDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLT 908
Query: 883 GADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 942
GAD+Y+LC+DA A KR+V ++ ++++ +D ++ L PS+S E
Sbjct: 909 GADLYSLCSDAMMTALKRRVRDLEEGLE----PRSSALLLTMEDLLQAAARLQPSVSEQE 964
Query: 943 LKKYELLRDQF 953
L +Y+ ++ +F
Sbjct: 965 LLRYKRIQRKF 975
Score = 192 (72.6 bits), Expect = 1.9e-122, Sum P(3) = 1.9e-122
Identities = 72/240 (30%), Positives = 104/240 (43%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSV 296
P +A L + + P CG + G K D L+ +F R + GDV +
Sbjct: 315 PPFARELHIEVLPSPHCG----VNG-----------KYDHVLYQHFHTPRVVQEGDV--L 357
Query: 297 CINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEPS-EETVLRVNCTKTALVLGGSI 352
C++ I +RL R + ++FKV V P + + T T+L L G+
Sbjct: 358 CVSTAGQVEILEGSLERLPRWRE--VFFKVKKTVGEAPDGPASAFLADTTHTSLYLAGTT 415
Query: 353 PSALPPDLLISGSN---DFVPLQG--DTVKILASILAPTLCPSVLSLKFRVAVLLHGLPG 407
S +PP L SG + D + G V L ++L P L P L VLL G PG
Sbjct: 416 LSRVPP--LPSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPG 473
Query: 408 CGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDV 467
GK T V RLG+H+++ C +L A S R L F+ A+ P +LLL D+
Sbjct: 474 SGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDL 533
Score = 179 (68.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 70/233 (30%), Positives = 107/233 (45%)
Query: 667 PKVPNVK---WEDVG--GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGK 721
P +P+ + W+ + GLE + + ++ P H + L S VLL GPPG+GK
Sbjct: 420 PPLPSGRSPPWDSLSPPGLEALVNELCAVLK-P--HLQPGGTLLTGTSCVLLQGPPGSGK 476
Query: 722 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 781
T A + L+ L V L E ++ F +AR RP V+ LD L
Sbjct: 477 TTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGR 536
Query: 782 ARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR-PDLIDPALLRPGRFDKLL 840
R G+ V+ + +L + D L+ L ++ ++R DL P +R F L
Sbjct: 537 DRDGLGEDARVV-ATLRHLLLDEDPLS-RCPPLMVVATTSRVQDL--PTDVRTA-FPHEL 591
Query: 841 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 893
V V S+ S R VL+ALT L ++V+L +A++C F D+YAL A
Sbjct: 592 EVPVLSE-SQRLSVLQALTAHLPLGQEVNLSQLARRCA-GFVVGDLYALLTHA 642
Score = 40 (19.1 bits), Expect = 1.9e-122, Sum P(3) = 1.9e-122
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 100 TCVLKQLSVTSGSLVLVKNA----ETTKQRIAQVVVLDP 134
+C L+ L + G V V T++ +AQV VL+P
Sbjct: 210 SC-LRSLGLFQGEWVWVARVGELPNTSQPHLAQVQVLEP 247
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 1007 (359.5 bits), Expect = 1.9e-122, Sum P(3) = 1.9e-122
Identities = 213/431 (49%), Positives = 297/431 (68%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++VA + LP +R F HE+ + L+E QR+ +L L + L G E +
Sbjct: 567 LMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQRLSVLQAL---TAHLP--LGQEVNLS 621
Query: 584 DIIGQTSGFMPRDLHALVADAG-ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQ 642
+ + +GF+ DL+AL+ A A R + + +E E +L A A
Sbjct: 622 QLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCA----------AGFP 671
Query: 643 VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
++ ED +A+++ + ++ A+GAPK+P+V W DVGGL+DVKK IL+T+QLPL H +L S
Sbjct: 672 LLA-EDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS 730
Query: 703 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +
Sbjct: 731 LGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFAR 789
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+NR
Sbjct: 790 ARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNR 848
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
PDL+DPALLRPGRFDKL++VG + D + + RVL A+TRKFKL VSL ++ CPP T
Sbjct: 849 PDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLT 908
Query: 883 GADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 942
GAD+Y+LC+DA A KR+V ++ ++++ +D ++ L PS+S E
Sbjct: 909 GADLYSLCSDAMMTALKRRVRDLEEGLE----PRSSALLLTMEDLLQAAARLQPSVSEQE 964
Query: 943 LKKYELLRDQF 953
L +Y+ ++ +F
Sbjct: 965 LLRYKRIQRKF 975
Score = 192 (72.6 bits), Expect = 1.9e-122, Sum P(3) = 1.9e-122
Identities = 72/240 (30%), Positives = 104/240 (43%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSV 296
P +A L + + P CG + G K D L+ +F R + GDV +
Sbjct: 315 PPFARELHIEVLPSPHCG----VNG-----------KYDHVLYQHFHTPRVVQEGDV--L 357
Query: 297 CINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEPS-EETVLRVNCTKTALVLGGSI 352
C++ I +RL R + ++FKV V P + + T T+L L G+
Sbjct: 358 CVSTAGQVEILEGSLERLPRWRE--VFFKVKKTVGEAPDGPASAFLADTTHTSLYLAGTT 415
Query: 353 PSALPPDLLISGSN---DFVPLQG--DTVKILASILAPTLCPSVLSLKFRVAVLLHGLPG 407
S +PP L SG + D + G V L ++L P L P L VLL G PG
Sbjct: 416 LSRVPP--LPSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPG 473
Query: 408 CGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDV 467
GK T V RLG+H+++ C +L A S R L F+ A+ P +LLL D+
Sbjct: 474 SGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDL 533
Score = 179 (68.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 70/233 (30%), Positives = 107/233 (45%)
Query: 667 PKVPNVK---WEDVG--GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGK 721
P +P+ + W+ + GLE + + ++ P H + L S VLL GPPG+GK
Sbjct: 420 PPLPSGRSPPWDSLSPPGLEALVNELCAVLK-P--HLQPGGTLLTGTSCVLLQGPPGSGK 476
Query: 722 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 781
T A + L+ L V L E ++ F +AR RP V+ LD L
Sbjct: 477 TTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGR 536
Query: 782 ARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR-PDLIDPALLRPGRFDKLL 840
R G+ V+ + +L + D L+ L ++ ++R DL P +R F L
Sbjct: 537 DRDGLGEDARVV-ATLRHLLLDEDPLS-RCPPLMVVATTSRVQDL--PTDVRTA-FPHEL 591
Query: 841 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 893
V V S+ S R VL+ALT L ++V+L +A++C F D+YAL A
Sbjct: 592 EVPVLSE-SQRLSVLQALTAHLPLGQEVNLSQLARRCA-GFVVGDLYALLTHA 642
Score = 40 (19.1 bits), Expect = 1.9e-122, Sum P(3) = 1.9e-122
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 100 TCVLKQLSVTSGSLVLVKNA----ETTKQRIAQVVVLDP 134
+C L+ L + G V V T++ +AQV VL+P
Sbjct: 210 SC-LRSLGLFQGEWVWVARVGELPNTSQPHLAQVQVLEP 247
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 1006 (359.2 bits), Expect = 1.7e-121, Sum P(3) = 1.7e-121
Identities = 213/433 (49%), Positives = 297/433 (68%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++VA + LP ++ F HE+ + L+E QR+ +L L + L G E +
Sbjct: 568 LMVVATTSRVQDLPTDVQTAFPHELEVPVLSEAQRLSILQAL---TAHLP--LGQEVNLP 622
Query: 584 DIIGQTSGFMPRDLHALVAD---AGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAA 640
+ + +GF+ DL+AL+ A IR S S +E E DL +A
Sbjct: 623 QLARRCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLC----------VAG 672
Query: 641 TQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDL 700
++ ED +A+++ + ++ A+GAP++P+V W DVGGL+DVKK IL+T+QLPL H +L
Sbjct: 673 FPLLA-EDFGQALDQLQTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPEL 731
Query: 701 FSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 760
S GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F
Sbjct: 732 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVF 790
Query: 761 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGAS 820
+AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+
Sbjct: 791 ARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGAT 849
Query: 821 NRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPN 880
NRPDL+DPALLRPGRFDKL++VG + D + + RVL A+TRKFKL VSL ++ CPP
Sbjct: 850 NRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQ 909
Query: 881 FTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSM 940
TGAD+Y+LC+DA A KR+V ++ ++++ +D ++ L PS+S
Sbjct: 910 LTGADLYSLCSDAMMTALKRRVRDLEEGLEL----RSSALLLTMEDLLQAAARLQPSVSE 965
Query: 941 AELKKYELLRDQF 953
EL +Y+ ++ +F
Sbjct: 966 QELLRYKRIQRKF 978
Score = 181 (68.8 bits), Expect = 1.7e-121, Sum P(3) = 1.7e-121
Identities = 70/228 (30%), Positives = 103/228 (45%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEP 331
D L+ +F+ R + GDV +C++ I +RL R + ++FKV V P
Sbjct: 339 DHVLYRHFQTPRVVQEGDV--LCVSTAGQVEILEGSLERLPRWRE--MFFKVKKTVGEAP 394
Query: 332 S-EETVLRVNCTKTALVLGGSIPSALPPDLLISGSN---DFVPLQG--DTVKILASILAP 385
+ + T T+L L G+ S +P L SG + D + G V L +IL P
Sbjct: 395 EGPASAFLADTTHTSLYLAGTALSHVPS--LPSGRSPPWDSLSPPGLEALVNELCAILKP 452
Query: 386 TLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAAL 445
L P L VLL G PG GK T V RLG+H+++ C +L A S R L
Sbjct: 453 HLQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKL 512
Query: 446 AQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIR 493
F+ A+ P +LLL D L+ + D +G + VA+ +R
Sbjct: 513 QATFSRARRCRPAVLLLTAVD----LLGRD---RDGLGEDARVAATLR 553
Score = 178 (67.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 76/285 (26%), Positives = 123/285 (43%)
Query: 667 PKVPNVK---WEDVG--GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGK 721
P +P+ + W+ + GLE + + ++ P H + L S VLL GPPG+GK
Sbjct: 421 PSLPSGRSPPWDSLSPPGLEALVNELCAILK-P--HLQPGGTLLTGTSCVLLQGPPGSGK 477
Query: 722 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 781
T A + L+ L V L E ++ F +AR RP V+ +D L
Sbjct: 478 TTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVLLLTAVDLLGR 537
Query: 782 ARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR-PDLIDPALLRPGRFDKLL 840
R G+ V + +L + D L+ L ++ ++R DL P ++ F L
Sbjct: 538 DRDGLGEDARVA-ATLRHLLLDEDALS-RCPPLMVVATTSRVQDL--PTDVQTA-FPHEL 592
Query: 841 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
V V S+ R +L+ALT L ++V+L +A++C F D+YAL AA
Sbjct: 593 EVPVLSEAQ-RLSILQALTAHLPLGQEVNLPQLARRCA-GFVVGDLYALLTHTC-RAACT 649
Query: 901 KVLXXXXXXXXXRIDQADSVVVEY----DDFVKVLRELSPSLSMA 941
++ D+ D V + +DF + L +L + S A
Sbjct: 650 RIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQTAHSQA 694
Score = 43 (20.2 bits), Expect = 1.7e-121, Sum P(3) = 1.7e-121
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 100 TCVLKQLSVTSGSLVLVKN-AE---TTKQRIAQVVVLDP 134
+C L+ L + G V V AE +++ R+AQV VL+P
Sbjct: 210 SC-LRSLGLFQGEWVWVAQVAELPNSSQPRLAQVQVLEP 247
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 1013 (361.7 bits), Expect = 1.9e-120, Sum P(3) = 1.9e-120
Identities = 212/431 (49%), Positives = 300/431 (69%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++VA ++ LP ++ F HE+ + L+E QR+ +L L + L G E +
Sbjct: 567 LMVVATTSQAQDLPADVQTAFPHELEVPVLSEGQRLSVLQAL---TAHLP--LGQEVNLT 621
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
+ + +GF+ DL+AL+ + R + + + KN S L ++ D + A
Sbjct: 622 QLARRCAGFVVGDLYALLTHSS----RVACTRI-KN----SGLAGGLSEEDEGELCAAGF 672
Query: 644 -MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
+ ED +A+E+ + ++ A+GAPK+P+V W DVGGL++VKK IL+T+QLPL H +L S
Sbjct: 673 PLLAEDFGQALEQLQTAHSQAIGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS 732
Query: 703 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +
Sbjct: 733 LGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFAR 791
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
AR+A PC+IFFDELDSLAP+RG +GDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+NR
Sbjct: 792 ARAAAPCIIFFDELDSLAPSRGRNGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNR 850
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
PDL+DPALLRPGRFDKL++VGV+ D + + RVL A+TRKFKL VSL ++ +CPP T
Sbjct: 851 PDLLDPALLRPGRFDKLVFVGVSEDRASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLT 910
Query: 883 GADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 942
GAD+Y+LC+DA A KR+V + ++++ DD ++ L PS+S E
Sbjct: 911 GADLYSLCSDAMTTALKRRVRDLEEGLEPG----SSTLLLTMDDLLQAAARLQPSVSEQE 966
Query: 943 LKKYELLRDQF 953
L +Y+ ++ +F
Sbjct: 967 LLRYKRIQRKF 977
Score = 187 (70.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 67/237 (28%), Positives = 103/237 (43%)
Query: 709 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 768
S VLL GPPG+GKT A + L+ L V L G EK ++ F +AR RP
Sbjct: 464 SSVLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRCRP 523
Query: 769 CVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDP 828
V+ +D L R G+ V+ + +L + D L + + S DL P
Sbjct: 524 VVLLLTAVDLLGRNRDGLGEDARVV-ATLCHLLQDEDPLTSCPPLMVVATTSQAQDL--P 580
Query: 829 ALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYA 888
A ++ F L V V S+ R VL+ALT L ++V+L +A++C F D+YA
Sbjct: 581 ADVQTA-FPHELEVPVLSE-GQRLSVLQALTAHLPLGQEVNLTQLARRCA-GFVVGDLYA 637
Query: 889 LCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEY----DDFVKVLRELSPSLSMA 941
L + A ++ D+ + + +DF + L +L + S A
Sbjct: 638 LLTHS-SRVACTRIKNSGLAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQA 693
Score = 167 (63.8 bits), Expect = 1.9e-120, Sum P(3) = 1.9e-120
Identities = 65/206 (31%), Positives = 92/206 (44%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEP 331
D L+ +F+ R + GDV +C+ I ++L R + ++FKV + P
Sbjct: 338 DHVLYRHFQTPRAVQEGDV--LCVPTVGQVEILEGSPEKLPRWWE--MFFKVKKTIGEAP 393
Query: 332 SEET-VLRVNCTKTALVLGGSIPSALPPDLLISGS----NDFVPLQGDT-VKILASILAP 385
T + T T+L L GS S +P L SG N P +T V L + L P
Sbjct: 394 DGPTSAYLADITHTSLYLVGSTLSLVPR--LTSGESTPWNSLSPPGLETLVTELCAALKP 451
Query: 386 TLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAAL 445
L P L +VLL G PG GK T V RLG+H+++ C +L A S L
Sbjct: 452 RLQPGGALLTGTSSVLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKL 511
Query: 446 AQAFNTAQSYSPTILLLRDFDVF-RN 470
F+ A+ P +LLL D+ RN
Sbjct: 512 QATFSRARRCRPVVLLLTAVDLLGRN 537
Score = 40 (19.1 bits), Expect = 1.9e-120, Sum P(3) = 1.9e-120
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 100 TCVLKQLSVTSGSLVLVKNA----ETTKQRIAQVVVLDP 134
+C L+ L + G V V A T++ +A+V VL+P
Sbjct: 210 SC-LRSLGLFQGEWVWVTRAGESSNTSQPHLARVQVLEP 247
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 1005 (358.8 bits), Expect = 8.2e-120, Sum P(3) = 8.2e-120
Identities = 212/431 (49%), Positives = 297/431 (68%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++VA ++ LP ++ F HE+ + L+E QR+ +L L + L G E +
Sbjct: 567 LMVVATTSRAQDLPADVQTAFPHELEVPALSEGQRLSILRAL---TAHLP--LGQEVNLA 621
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
+ + +GF+ DL+AL+ + R + + + KN S L + D + A
Sbjct: 622 QLARRCAGFVVGDLYALLTHSS----RAACTRI-KN----SGLAGGLTEEDEGELCAAGF 672
Query: 644 -MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
+ ED +A+E+ + ++ A+GAPK+P+V W DVGGL++VKK IL+T+QLPL H +L S
Sbjct: 673 PLLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS 732
Query: 703 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +
Sbjct: 733 LGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFAR 791
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+NR
Sbjct: 792 ARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNR 850
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
PDL+DPALLRPGRFDKL++VG N D + + RVL A+TRKFKL VSL ++ CPP T
Sbjct: 851 PDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLT 910
Query: 883 GADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 942
GAD+Y+LC+DA A KR+V + ++++ +D ++ L PS+S E
Sbjct: 911 GADLYSLCSDAMTAALKRRVHDLEEGLEPG----SSALMLTMEDLLQAAARLQPSVSEQE 966
Query: 943 LKKYELLRDQF 953
L +Y+ ++ +F
Sbjct: 967 LLRYKRIQRKF 977
Score = 205 (77.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 82/282 (29%), Positives = 123/282 (43%)
Query: 667 PKVPNVKWEDVG--GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLL 724
P + W + GLE + S L V P L + L S VLL GPPG GKT +
Sbjct: 423 PSEESTLWSSLSPPGLEALV-SELCAVLKPRLQPG--GALLTGTSSVLLRGPPGCGKTTV 479
Query: 725 AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 784
A + L+ L V L G E ++ IF +AR RP V+ +D L R
Sbjct: 480 VAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRD 539
Query: 785 ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP-DLIDPALLRPGRFDKLLYVG 843
G+ VM V+ +L D LN S L ++ ++R DL PA ++ F L V
Sbjct: 540 GLGEDARVM-AVLRHLLLNEDPLN-SCPPLMVVATTSRAQDL--PADVQTA-FPHELEVP 594
Query: 844 VNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 903
S+ R +L+ALT L ++V+L +A++C F D+YAL + AA ++
Sbjct: 595 ALSE-GQRLSILRALTAHLPLGQEVNLAQLARRCA-GFVVGDLYALLTHS-SRAACTRIK 651
Query: 904 XXXXXXXXXRIDQADSVVVEY----DDFVKVLRELSPSLSMA 941
D+ + + +DF + L +L + S A
Sbjct: 652 NSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQA 693
Score = 171 (65.3 bits), Expect = 8.2e-120, Sum P(3) = 8.2e-120
Identities = 66/226 (29%), Positives = 101/226 (44%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEP 331
D L+ +F++ R + GDV +C+ I ++L R + ++FKV V P
Sbjct: 338 DGVLYRHFQIPRVVQEGDV--LCVPTIGQVEILEGSPEKLPRWRE--MFFKVKKTVGEAP 393
Query: 332 S-EETVLRVNCTKTALVLGGSIPSA---LPPDLLISGSNDFVPLQGDTVKILASILAPTL 387
+ + T T+L + GS S LP + S+ P V L ++L P L
Sbjct: 394 DGPASAYLADTTHTSLYMVGSTLSPVPWLPSEESTLWSSLSPPGLEALVSELCAVLKPRL 453
Query: 388 CPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQ 447
P L +VLL G PGCGK TVV LG+H+++ C +L A S L
Sbjct: 454 QPGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQA 513
Query: 448 AFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIR 493
F+ A+ P +LLL D L+ + D +G + V +V+R
Sbjct: 514 IFSRARRCRPAVLLLTAVD----LLGRD---RDGLGEDARVMAVLR 552
Score = 38 (18.4 bits), Expect = 8.2e-120, Sum P(3) = 8.2e-120
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 100 TCVLKQLSVTSGSLVLVKNAE----TTKQRIAQVVVLDP 134
+C L+ L + G V V A T++ +A+V VL+P
Sbjct: 210 SC-LRGLGLFQGEWVWVAQARESSNTSQPHLARVQVLEP 247
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 996 (355.7 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 215/431 (49%), Positives = 292/431 (67%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
V++V + S LP + F H++++ L+E QR +LS L + + L D K
Sbjct: 658 VVVVGSVSSQHELPSDVMAAFVHQVAIESLSEDQRRMVLSSLSEDLL-LGKDVNLGRIAK 716
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
QT+GF+ DL AL+ +AG R+ V+ P E+ V+ + + + V
Sbjct: 717 ----QTAGFVLGDLCALLTNAGKAAHRRL---VETYFP-EA-----VSEQEEEDLCVSGV 763
Query: 644 -MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
+ ED A++ ++ ++ A+GAPK+P V W+DVGGL+ VKK ILDT+QLPL H +L S
Sbjct: 764 SVTSEDFSAALDVLQEAHSQAIGAPKIPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLS 823
Query: 703 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
GLR RSG+LLYGPPGTGKTLLAKAVATEC++ FLSVKGPELINMY+G+SE+N+R + K
Sbjct: 824 LGLR-RSGLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQVSSK 882
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
ARSA PC+IFFDELDSLAP RG SGDSGGVMDRVVSQ+LAE+DGL+ SS D+F+IGA+NR
Sbjct: 883 ARSAAPCIIFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGLH-SSGDVFVIGATNR 941
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
PDL+D +LLRPGRFDKL+YVG+N D + +VLKA+ RKFK+ V L I + CPP T
Sbjct: 942 PDLLDQSLLRPGRFDKLVYVGINEDRESQLQVLKAILRKFKVDASVCLSDIVESCPPRLT 1001
Query: 883 GADMYALCADAWFHAAKRKVLXXXXXXXXXRID-QADSVVVEYDDFVKVLRELSPSLSMA 941
GAD+Y+LC+DA A KRK+ +D + S+ + +DF + L L PS+S
Sbjct: 1002 GADLYSLCSDAMMCAVKRKI-----SRITEGVDSELSSLTLCSEDFSEALSGLQPSVSEQ 1056
Query: 942 ELKKYELLRDQ 952
++ +Y+LL+ +
Sbjct: 1057 QISRYQLLQQK 1067
Score = 182 (69.1 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 50/156 (32%), Positives = 80/156 (51%)
Query: 321 IIYFKV-----VAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQ--- 372
++YF+V + E E + + + T+L +GGS S P +L S+ + L
Sbjct: 474 VLYFRVKQACGFSSEEEEASSYLADSSHTSLYMGGSAHSLCPYSVLPEASSFWTSLSPPG 533
Query: 373 -GDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431
TV+ L +I+ P L S L LK ++LL G G GK T VR V+RRL +H+++ C
Sbjct: 534 LSSTVEKLITIIQPHLNESTLILKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCV 593
Query: 432 NLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDV 467
L A + + A + F A+ + P +LLLR+ +
Sbjct: 594 TLCADTAAASEAKIKSVFERAELHHPCLLLLRNLQL 629
Score = 149 (57.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 67/269 (24%), Positives = 120/269 (44%)
Query: 679 GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLS 738
GL + ++ +Q P L++ L++ +LL GP G+GK +AV+ L+ +
Sbjct: 533 GLSSTVEKLITIIQ-PHLNESTLI--LKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIK 589
Query: 739 VKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDRVV 797
V L SE ++ +F++A PC++ L L +R GA D RV
Sbjct: 590 VDCVTLCADTAAASEAKIKSVFERAELHHPCLLLLRNLQLLGQSRDGAETDC-----RVA 644
Query: 798 SQMLAEIDGLNDSSQDLFIIGA-SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 856
+ + I ++ S + ++G+ S++ +L P+ + ++ ++ D R VL
Sbjct: 645 ATLCQLIAAVHTS---VVVVGSVSSQHEL--PSDVMAAFVHQVAIESLSED--QRRMVLS 697
Query: 857 ALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQ 916
+L+ L +DV+L IAK+ F D+ AL +A AA R+++ ++
Sbjct: 698 SLSEDLLLGKDVNLGRIAKQTA-GFVLGDLCALLTNAG-KAAHRRLVETYFPEAVSEQEE 755
Query: 917 AD----SVVVEYDDFVKVLRELSPSLSMA 941
D V V +DF L L + S A
Sbjct: 756 EDLCVSGVSVTSEDFSAALDVLQEAHSQA 784
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 989 (353.2 bits), Expect = 8.6e-117, Sum P(2) = 8.6e-117
Identities = 212/431 (49%), Positives = 295/431 (68%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
VL++ + +P ++ F HE+ + L+E QR MLS L + G E +
Sbjct: 267 VLVIGTTCKPQDVPTDVQTAFLHEVKIEALSEDQRRAMLSMLTASLP-----LGKEVSLA 321
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDK-NEPGESDLTAKVAHNDNSSIAATQ 642
+ +T+GF+ D AL++ + R + + + + PG L +V + A
Sbjct: 322 KLARRTAGFVLGDFCALLSHSS----RAACTRIQALSFPG--GLNEEVERD--FCTAGFP 373
Query: 643 VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
V+ +ED A+++ ++ A+GAPK+P+V W+DVGGL +VKK ILDT+QLPL H +L S
Sbjct: 374 VL-EEDFNVALDQLHDAHSQAVGAPKIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELLS 432
Query: 703 SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
GL RSG+LLYGPPGTGKTLLAKAVAT C++ FLSVKGPELINMY+G+SE+NVR++F +
Sbjct: 433 LGLC-RSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVFAR 491
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
AR+A PC+IFFDELDSLAP RG SGDSGGVMDRVVSQ+LAE+DGL+ SS+++F+IGA+NR
Sbjct: 492 ARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLH-SSREVFVIGATNR 550
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
PDL+DPALLRPGRFDKL+YVGVN D + +VL A+TRKFKL V+L SI ++CP T
Sbjct: 551 PDLLDPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLT 610
Query: 883 GADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 942
GAD+Y+LC+DA A KRKV ++ ++++ +DF++ L PS+S E
Sbjct: 611 GADIYSLCSDAMMCAVKRKVEWIEEGLDT----ESSALILTMEDFLQAAARLQPSVSEQE 666
Query: 943 LKKYELLRDQF 953
L +Y+L++ +F
Sbjct: 667 LLRYKLIQQKF 677
Score = 182 (69.1 bits), Expect = 8.6e-117, Sum P(2) = 8.6e-117
Identities = 71/258 (27%), Positives = 109/258 (42%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCI-NWNCSSMICIPCRQRLHRRSDNIIYFKVV----AV 329
D L+ +F+ R + GDV +C+ + C+ + + L R + +YFKV V
Sbjct: 37 DRLLYRHFQTPRLVQEGDV--LCVPTFGCAEFLDGNADKFL-RWPE--LYFKVRKVLGTV 91
Query: 330 EPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQ----GDTVKILASILAP 385
E + + T+L L GS SA+P + + L D VK + L P
Sbjct: 92 EGMQSEGYLADTQNTSLYLVGSTNSAVPSAPAYTSHEFWSSLSPAGLSDVVKEICDALRP 151
Query: 386 TLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAAL 445
L +L +VLL G G GK VR V L +H+ + C +L + T +
Sbjct: 152 HLTSQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKI 211
Query: 446 AQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDE 505
AF AQ Y P +LLL+D +V D++G + V + +R+ D +
Sbjct: 212 HMAFAQAQQYHPCVLLLKDIEVLGR-------DRDRLGEDARVIATLRQLLLD--RDPAQ 262
Query: 506 ESHGYFPVKEIEKICRQQ 523
SH PV I C+ Q
Sbjct: 263 SSH---PVLVIGTTCKPQ 277
Score = 175 (66.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 61/233 (26%), Positives = 107/233 (45%)
Query: 660 NASALGAPKVPNVK-WEDVG--GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGP 716
N++ AP + + W + GL DV K I D ++ P H ++ L VLL GP
Sbjct: 115 NSAVPSAPAYTSHEFWSSLSPAGLSDVVKEICDALR-P--HLTSQAAALSGAGSVLLSGP 171
Query: 717 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDEL 776
G+GKT+ +AV + +L+ V L +E+ + F +A+ PCV+ ++
Sbjct: 172 SGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHMAFAQAQQYHPCVLLLKDI 231
Query: 777 DSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRF 836
+ L R G+ V+ + Q+L + D SS + +IG + +P + P ++
Sbjct: 232 EVLGRDRDRLGEDARVI-ATLRQLLLDRDPAQ-SSHPVLVIGTTCKPQDV-PTDVQTAFL 288
Query: 837 DKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYAL 889
++ ++ D R +L LT L ++VSL +A++ F D AL
Sbjct: 289 HEVKIEALSED--QRRAMLSMLTASLPLGKEVSLAKLARRTA-GFVLGDFCAL 338
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 995 (355.3 bits), Expect = 8.7e-115, Sum P(2) = 8.7e-115
Identities = 210/430 (48%), Positives = 295/430 (68%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++VA ++ LP ++ F HE+ + L E QR+ +L L + L G E +
Sbjct: 567 LMVVATTSRAQDLPADVQTAFPHELEVPVLAEAQRLSVLRAL---TAHLP--LGQEVNLA 621
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
+ + +GF+ DL AL+ + R + + + KN L+ + ++ AA
Sbjct: 622 QLARRCAGFVVGDLFALLTHSS----RAACTRI-KNSGWAGGLSEE---DEGELCAAGFP 673
Query: 644 MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
+ ED +A+E+ + ++ A+GAP++P+V W DVGGL++VKK IL+T+QLPL H +L S
Sbjct: 674 LLAEDFGQALEQLQAAHSQAIGAPRIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSL 733
Query: 704 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 763
GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +A
Sbjct: 734 GLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARA 792
Query: 764 RSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP 823
R+A PC+IFFDELDSLAP RG SGDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+NRP
Sbjct: 793 RAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNRP 851
Query: 824 DLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTG 883
DL+DPALLRPGRFDKL++VGVN D + + RVL A+TRKF+L VSL + CPP TG
Sbjct: 852 DLLDPALLRPGRFDKLVFVGVNEDRASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTG 911
Query: 884 ADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
AD+Y+LC+DA A KR+V + ++++ +D ++ L PS+S EL
Sbjct: 912 ADLYSLCSDAMTAALKRRVRDLEEGLEPG----SSALLLTMEDLLQAAARLQPSVSEQEL 967
Query: 944 KKYELLRDQF 953
+Y+ ++ +F
Sbjct: 968 LRYKRIQRKF 977
Score = 178 (67.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 75/285 (26%), Positives = 124/285 (43%)
Query: 667 PKVPN---VKWEDVG--GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGK 721
P++P+ W + GLE + + ++ P L + L VLL GPPG+GK
Sbjct: 420 PRLPSGDSTPWSSLSPPGLEALVTELCTALK-PRLQPG--GALLTGTGSVLLRGPPGSGK 476
Query: 722 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 781
T A + L+ L V L G E ++ F +AR RP V+ +D L
Sbjct: 477 TTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVVLLLTAVDLLGR 536
Query: 782 ARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP-DLIDPALLRPGRFDKLL 840
R G+ V+ + +L + D L S L ++ ++R DL PA ++ F L
Sbjct: 537 DRDGLGEDARVV-ATLRHLLLDEDPLA-SCPPLMVVATTSRAQDL--PADVQTA-FPHEL 591
Query: 841 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
V V ++ R VL+ALT L ++V+L +A++C F D++AL + AA
Sbjct: 592 EVPVLAEAQ-RLSVLRALTAHLPLGQEVNLAQLARRCA-GFVVGDLFALLTHS-SRAACT 648
Query: 901 KVLXXXXXXXXXRIDQADSVVVEY----DDFVKVLRELSPSLSMA 941
++ D+ + + +DF + L +L + S A
Sbjct: 649 RIKNSGWAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQAAHSQA 693
Score = 157 (60.3 bits), Expect = 8.7e-115, Sum P(2) = 8.7e-115
Identities = 61/202 (30%), Positives = 89/202 (44%)
Query: 275 DLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKV---VAVEP 331
D L+ +F+ R + GDV V + P ++L R + ++FKV V P
Sbjct: 338 DHVLYRHFQTPRAVQEGDVLCVPTVGQVEILEASP--EKLPRWQE--MFFKVKRTVGEAP 393
Query: 332 SEET-VLRVNCTKTALVLGGSIPSALPPDLLISG-SNDFVPLQGDTVKILAS----ILAP 385
+ + T+L L GS S +P L SG S + L ++ L + L P
Sbjct: 394 DGQARAYLADSAHTSLYLVGSTLSLVPR--LPSGDSTPWSSLSPPGLEALVTELCTALKP 451
Query: 386 TLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAAL 445
L P L +VLL G PG GK T V RLG+H+++ C +L A S L
Sbjct: 452 RLQPGGALLTGTGSVLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKL 511
Query: 446 AQAFNTAQSYSPTILLLRDFDV 467
AF+ A+ P +LLL D+
Sbjct: 512 QAAFSRARRCRPVVLLLTAVDL 533
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 1000 (357.1 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 212/430 (49%), Positives = 297/430 (69%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++VA ++ LP ++ F HE+ + L+E QR+ +L L + L G E +
Sbjct: 157 LMVVATTSRAQDLPADVQTAFPHELEVPALSEGQRLSILRAL---TAHLP--LGQEVNLA 211
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
+ + +GF+ DL+AL+ + R + + + KN LT + ++ AA
Sbjct: 212 QLARRCAGFVVGDLYALLTHSS----RAACTRI-KNLGLAGGLTEE---DEGELCAAGFP 263
Query: 644 MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
+ ED +A+E + ++ A+GAPK+P+V W DVGGL++VKK IL+T+QLPL H +L S
Sbjct: 264 LLAEDFGQALELQQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSL 323
Query: 704 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 763
GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +A
Sbjct: 324 GLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARA 382
Query: 764 RSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP 823
R+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+NRP
Sbjct: 383 RAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNRP 441
Query: 824 DLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTG 883
DL+DPALLRPGRFDKL++VG N D + + RVL A+TRKFKL VSL ++ CPP TG
Sbjct: 442 DLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTG 501
Query: 884 ADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
AD+Y+LC+DA A KR+V + ++++ +D ++ L PS+S EL
Sbjct: 502 ADLYSLCSDAMTAALKRRVHDLEEGLEPG----SSALMLTMEDLLQAAARLQPSVSEQEL 557
Query: 944 KKYELLRDQF 953
+Y+ ++ +F
Sbjct: 558 LRYKRIQHKF 567
Score = 194 (73.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 71/226 (31%), Positives = 105/226 (46%)
Query: 667 PKVPNVKWEDVG--GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLL 724
P + W + GLE + S L V P L + L S VLL GPPG GKT +
Sbjct: 13 PSEKSTLWSSLSPPGLEALV-SELCAVLKPRLQPG--GALLTGTSSVLLRGPPGCGKTTV 69
Query: 725 AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 784
A ++ L+ L V L G E ++ IF +AR RP V+ +D L R
Sbjct: 70 VAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRD 129
Query: 785 ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP-DLIDPALLRPGRFDKLLYVG 843
G+ V+ + +L + D LN S L ++ ++R DL PA ++ F L V
Sbjct: 130 GLGEDARVV-AALRHLLLDEDPLN-SCPPLMVVATTSRAQDL--PADVQTA-FPHELEVP 184
Query: 844 VNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYAL 889
S+ R +L+ALT L ++V+L +A++C F D+YAL
Sbjct: 185 ALSE-GQRLSILRALTAHLPLGQEVNLAQLARRCA-GFVVGDLYAL 228
Score = 145 (56.1 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 34/92 (36%), Positives = 47/92 (51%)
Query: 376 VKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMA 435
V L ++L P L P L +VLL G PGCGK TVV +LG+H+++ C +L A
Sbjct: 32 VSELCAVLKPRLQPGGALLTGTSSVLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCA 91
Query: 436 SSERKTSAALAQAFNTAQSYSPTILLLRDFDV 467
S L F+ A+ P +LLL D+
Sbjct: 92 DSSGAVETKLQAIFSRARRCRPAVLLLTAVDL 123
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 1003 (358.1 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 211/430 (49%), Positives = 299/430 (69%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVK 583
+++VA ++ LP ++ F HE+ + L+E QR+ +L L + L G E +
Sbjct: 556 LMVVATTSRAQDLPADVQTAFPHELEVPVLSEGQRLSILQAL---TAHLP--LGQEVNLA 610
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
+ + +GF+ DL+AL+ + R + + + KN L+ + ++ AA
Sbjct: 611 QLARRCAGFVVGDLYALLTHSS----RAACTRI-KNSGWAGGLSEE---DEGELCAAGFP 662
Query: 644 MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
+ EDL +A+E+ + ++ A+GAPK+P+V W DVGGL++VKK IL+T+QLPL H +L S
Sbjct: 663 LLAEDLGQALEQLQSAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSL 722
Query: 704 GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKA 763
GLR RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +A
Sbjct: 723 GLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARA 781
Query: 764 RSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP 823
R+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL+ S+QD+F+IGA+NRP
Sbjct: 782 RAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNRP 840
Query: 824 DLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTG 883
DL+DPALLRPGRFDKL++VG + D + + RVL A+TRKF+L VSL ++ CPP TG
Sbjct: 841 DLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTG 900
Query: 884 ADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
AD+Y+LCADA A KR+V + ++++ +D ++ L PS+S EL
Sbjct: 901 ADLYSLCADAMTAALKRRVRDLEDGLEPG----SSALLLTMEDLLQAAARLQPSVSEHEL 956
Query: 944 KKYELLRDQF 953
+Y+ ++ +F
Sbjct: 957 LRYKRIQRKF 966
Score = 181 (68.8 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 67/228 (29%), Positives = 103/228 (45%)
Query: 665 GAPKVPNVKWEDVG--GLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKT 722
G P + W + GLE + + ++ P L + L VLL GPPG+GKT
Sbjct: 410 GLPSGESTPWSSLSPPGLETLVTELCAALK-PRLQPG--GALLTAPGSVLLRGPPGSGKT 466
Query: 723 LLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPA 782
A L+ L V L G E ++ F +AR RP V+ +D L
Sbjct: 467 TAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVVLLLTAVDLLGRD 526
Query: 783 RGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRP-DLIDPALLRPGRFDKLLY 841
R G+ V+ + ++L + D L S L ++ ++R DL PA ++ F L
Sbjct: 527 RDGLGEDARVV-ATLRRLLLDEDPLT-SHPPLMVVATTSRAQDL--PADVQTA-FPHELE 581
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYAL 889
V V S+ R +L+ALT L ++V+L +A++C F D+YAL
Sbjct: 582 VPVLSE-GQRLSILQALTAHLPLGQEVNLAQLARRCA-GFVVGDLYAL 627
Score = 135 (52.6 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 45/129 (34%), Positives = 61/129 (47%)
Query: 344 TALVLGGSIPSALPPDLLISGSN----DFVPLQGDT-VKILASILAPTLCPSVLSLKFRV 398
T++ L GS S +P L SG + P +T V L + L P L P L
Sbjct: 396 TSVYLVGSTLSLVPG--LPSGESTPWSSLSPPGLETLVTELCAALKPRLQPGGALLTAPG 453
Query: 399 AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPT 458
+VLL G PG GK T V RLG+H+++ C +L A S L AF+ A+ P
Sbjct: 454 SVLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPV 513
Query: 459 ILLLRDFDV 467
+LLL D+
Sbjct: 514 VLLLTAVDL 522
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 871 (311.7 bits), Expect = 4.6e-109, Sum P(4) = 4.6e-109
Identities = 159/255 (62%), Positives = 206/255 (80%)
Query: 646 KEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGL 705
+EDL KA +++ + ++GAP++PNV W+D+GG++ VK ILDT+ +PL H +LF+SG+
Sbjct: 703 QEDLSKATSKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTSGM 762
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
+KRSG+L YGPPGTGKTL+AKA+AT SLNF SVKGPEL+NMYIGESE NVR +FQKAR
Sbjct: 763 KKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARE 822
Query: 766 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDL 825
A+PCVIFFDE+DS+AP RG GDSGGVMDR+VSQ+LAE+DG++ + +F+IGA+NRPDL
Sbjct: 823 AKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDL 882
Query: 826 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGAD 885
+D ALLRPGRFDKLLY+G+ + + +L+ALTRKF L DV L +AK CP N+TGAD
Sbjct: 883 LDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGAD 942
Query: 886 MYALCADAWFHAAKR 900
YALC+DA +A R
Sbjct: 943 FYALCSDAMLNAMSR 957
Score = 110 (43.8 bits), Expect = 4.6e-109, Sum P(4) = 4.6e-109
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 376 VKILASILAPTLCPSVLSLKFRVAVLLHGLPG-CGKRTVVRYVARRLGIHVVEYSCHNLM 434
V+ L +IL + S + +VLLH GK T+VR+ ++ LGIH++E C +L
Sbjct: 454 VRQLVNILETSFNCSQRGITLNASVLLHSTTNNVGKATMVRFASKYLGIHLLEIDCLSLT 513
Query: 435 ASSER--KTSAAL----AQAFNTAQSYSPTILLLRDFD-VFRNLVSNESLPND---QVGL 484
++S + TS + A+ N SP ++ L D + ++ +N+ P Q +
Sbjct: 514 SNSRQLDSTSKIIGYIRAKCENVLPYASPAVIFLAHLDSILLDVNANQD-PEAIKLQKSI 572
Query: 485 SSEVASVIREFT 496
+ E++ ++ +FT
Sbjct: 573 NFEMSKLLDDFT 584
Score = 97 (39.2 bits), Expect = 4.6e-109, Sum P(4) = 4.6e-109
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 920 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 956
VVV+ +DF+K +L+PS+S AEL YE +R FEG+
Sbjct: 994 VVVKMEDFLKAQEQLTPSVSRAELNHYEAVRANFEGA 1030
Score = 83 (34.3 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
Identities = 34/155 (21%), Positives = 64/155 (41%)
Query: 352 IPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLS--LKFRVAVLLHGLPGCG 409
IP+ D+ G DFV +G+ IL +I P P + + +K R +L +G PG G
Sbjct: 726 IPNVTWDDI---GGIDFV--KGE---ILDTIDMPLKHPELFTSGMKKRSGILFYGPPGTG 777
Query: 410 KRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFR 469
K + + +A ++ L+ ++ A + + F A+ P ++ FD
Sbjct: 778 KTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIF---FDEID 834
Query: 470 NLVSNESLPNDQVGLSSEVASVIREFTEPSAEDED 504
++ D G+ + S + + + D D
Sbjct: 835 SVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDAD 869
Score = 52 (23.4 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 35/141 (24%), Positives = 62/141 (43%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMG-PLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
V ++ A + + L + R F + +G P T+ +++ +L L + L +D E
Sbjct: 871 VFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFV-LDNDVKLIE 929
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDN--SSI 638
K +G D +AL +DA N + + V+K ++LT + I
Sbjct: 930 LAKLCPFNYTG---ADFYALCSDAMLNAMSRIARMVEKKVSQHNELTGENISTRRWFDKI 986
Query: 639 AA---TQVMGK-EDLVKAMER 655
A T+V+ K ED +KA E+
Sbjct: 987 ATKEDTKVVVKMEDFLKAQEQ 1007
Score = 44 (20.5 bits), Expect = 4.6e-109, Sum P(4) = 4.6e-109
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 103 LKQLSVTSGSLVLVKNAETTKQRIAQVVVLDPPTTRKQ 140
L +L VTSGS + V N R+ ++ VL P K+
Sbjct: 240 LLRLDVTSGSFITVSNMGCV--RLVKLFVLLLPNGFKK 275
Score = 37 (18.1 bits), Expect = 2.1e-101, Sum P(4) = 2.1e-101
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 469 RNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYF 511
R L N+ +P + S +A + E + E +DE+ G +
Sbjct: 344 RILCQNDLIP---IAFDSSMADL--NIAEENDESDDEDELGQY 381
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 920 (328.9 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 230/604 (38%), Positives = 344/604 (56%)
Query: 319 DNIIYFKVVAVEPS---EETVLRVNCTKTALVLGGSIPSALPPDLLISGSN--DFVPLQG 373
D + +FK+ V+ + + ++ +KT LV G LP + + + P+
Sbjct: 462 DAVAWFKITEVKGANSIDTNQFLIDPSKTMLVSSGVESIRLPQNSFVKWYQYLNLPPIFN 521
Query: 374 --DTVKI-LASILAPTLCPSVLS-LKFRVAVLLHGLP-GCGKRTVVRYVARRLGIHVVEY 428
+T A TL + S + + ++LL + G GK T+VR LG++++E
Sbjct: 522 YEETGDFKYAKEFKKTLSTCLASKINLKTSILLTSMSRGIGKTTLVRNSCIELGLNLIEL 581
Query: 429 SCHNLM-ASSERKTSAALAQAFNTAQSYSPTILLLRDFDV-FRNLVSNESLPNDQVGLSS 486
C +L+ E KT L + + + F V + + N D+ +S
Sbjct: 582 DCFDLLNPGQELKTIGLLTGKIDKLIA---NVQSTSSFHVIYLKHIENLCPKTDENDQNS 638
Query: 487 EVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSH 546
+ FT S + + H Y K R V++++ D + L ++
Sbjct: 639 SI------FTSLSLKII-QVLHDYL------KTYRNLVIVMSCNDYDK-LNDNLKSIIKF 684
Query: 547 EISMGPLTEQQRVEMLSQLL--QPVSELTSDTGSEEFV--KDI-----IGQTSGFMPRDL 597
I +E +R+E+ L+ + T D S F KDI Q++G PRDL
Sbjct: 685 TIEFTVPSENERLEIFKFLINNEKNKTFTKDINSYPFTIRKDINFKNLALQSAGLTPRDL 744
Query: 598 HALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSK 657
+++ + L K +++ K +S ++ + N + V +D A+ ++
Sbjct: 745 ISIIKKS-KKLAIKRLTKLSK----DSQISIQNIVNIGNGGVINWV--PDDFNAAINEAR 797
Query: 658 KRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPP 717
+ + ++GAP++PNVKWED+GGL+ VK ILDT+ +PL H +LF++GL+KRSG+L YGPP
Sbjct: 798 NQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNNGLKKRSGILFYGPP 857
Query: 718 GTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELD 777
GTGKTLLAKA+AT SLNF SVKGPEL+NMYIGESE NVR +FQ+AR A+PCVIFFDELD
Sbjct: 858 GTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELD 917
Query: 778 SLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD-LFIIGASNRPDLIDPALLRPGRF 836
S+AP RG GDSGGVMDR+VSQ+LAE+DG++ D +F++GA+NRPDL+D ALLRPGRF
Sbjct: 918 SVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRF 977
Query: 837 DKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFH 896
DK+LY+G++ + ++L+ALTRKFKL ++V+L +A KC FTGAD YALC+D+ +
Sbjct: 978 DKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSMLN 1037
Query: 897 AAKR 900
A R
Sbjct: 1038 AMTR 1041
Score = 92 (37.4 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 915 DQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEG 955
+Q +V+V+ +DF+K EL PS+S EL+ Y +R+ FEG
Sbjct: 1077 EQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFEG 1117
Score = 39 (18.8 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 177 YLSPLLAFNLDLHISS 192
Y+SP+L NL L S
Sbjct: 341 YMSPILLINLKLQKDS 356
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 920 (328.9 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 230/604 (38%), Positives = 344/604 (56%)
Query: 319 DNIIYFKVVAVEPS---EETVLRVNCTKTALVLGGSIPSALPPDLLISGSN--DFVPLQG 373
D + +FK+ V+ + + ++ +KT LV G LP + + + P+
Sbjct: 462 DAVAWFKITEVKGANSIDTNQFLIDPSKTMLVSSGVESIRLPQNSFVKWYQYLNLPPIFN 521
Query: 374 --DTVKI-LASILAPTLCPSVLS-LKFRVAVLLHGLP-GCGKRTVVRYVARRLGIHVVEY 428
+T A TL + S + + ++LL + G GK T+VR LG++++E
Sbjct: 522 YEETGDFKYAKEFKKTLSTCLASKINLKTSILLTSMSRGIGKTTLVRNSCIELGLNLIEL 581
Query: 429 SCHNLM-ASSERKTSAALAQAFNTAQSYSPTILLLRDFDV-FRNLVSNESLPNDQVGLSS 486
C +L+ E KT L + + + F V + + N D+ +S
Sbjct: 582 DCFDLLNPGQELKTIGLLTGKIDKLIA---NVQSTSSFHVIYLKHIENLCPKTDENDQNS 638
Query: 487 EVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSH 546
+ FT S + + H Y K R V++++ D + L ++
Sbjct: 639 SI------FTSLSLKII-QVLHDYL------KTYRNLVIVMSCNDYDK-LNDNLKSIIKF 684
Query: 547 EISMGPLTEQQRVEMLSQLL--QPVSELTSDTGSEEFV--KDI-----IGQTSGFMPRDL 597
I +E +R+E+ L+ + T D S F KDI Q++G PRDL
Sbjct: 685 TIEFTVPSENERLEIFKFLINNEKNKTFTKDINSYPFTIRKDINFKNLALQSAGLTPRDL 744
Query: 598 HALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSK 657
+++ + L K +++ K +S ++ + N + V +D A+ ++
Sbjct: 745 ISIIKKS-KKLAIKRLTKLSK----DSQISIQNIVNIGNGGVINWV--PDDFNAAINEAR 797
Query: 658 KRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPP 717
+ + ++GAP++PNVKWED+GGL+ VK ILDT+ +PL H +LF++GL+KRSG+L YGPP
Sbjct: 798 NQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNNGLKKRSGILFYGPP 857
Query: 718 GTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELD 777
GTGKTLLAKA+AT SLNF SVKGPEL+NMYIGESE NVR +FQ+AR A+PCVIFFDELD
Sbjct: 858 GTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELD 917
Query: 778 SLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD-LFIIGASNRPDLIDPALLRPGRF 836
S+AP RG GDSGGVMDR+VSQ+LAE+DG++ D +F++GA+NRPDL+D ALLRPGRF
Sbjct: 918 SVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRF 977
Query: 837 DKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFH 896
DK+LY+G++ + ++L+ALTRKFKL ++V+L +A KC FTGAD YALC+D+ +
Sbjct: 978 DKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSMLN 1037
Query: 897 AAKR 900
A R
Sbjct: 1038 AMTR 1041
Score = 92 (37.4 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 915 DQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEG 955
+Q +V+V+ +DF+K EL PS+S EL+ Y +R+ FEG
Sbjct: 1077 EQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFEG 1117
Score = 39 (18.8 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 177 YLSPLLAFNLDLHISS 192
Y+SP+L NL L S
Sbjct: 341 YMSPILLINLKLQKDS 356
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 899 (321.5 bits), Expect = 1.4e-101, Sum P(4) = 1.4e-101
Identities = 189/387 (48%), Positives = 261/387 (67%)
Query: 525 LLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKD 584
+L+A + +P +R F+HE+ M E +R +L ++ + D G + +
Sbjct: 847 VLIATTTEPDKIPDGVRGLFTHELEMTAPDEGEREGILRSIVDQRG-INLDPGVD--LGG 903
Query: 585 IIGQTSGFMPRDL-----HALVADAGA--NLIRKSNSEVDKNEPGESDLTAKVAHNDNSS 637
+ +T+ + DL A+VA +L K++ N+P + +VA
Sbjct: 904 VALKTAALVAGDLVDVIDRAIVAQRSRLESLAEKASQSRQGNQPAVTLRDVQVAGG---- 959
Query: 638 IAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLH 697
A + + K DL A+E ++K A A+GAPK+P+V W+DVGGL +VK ++++T+QLPL
Sbjct: 960 -TAVRGLTKGDLDTAVEAARKNFADAIGAPKIPSVTWDDVGGLGNVKDAVMETIQLPLER 1018
Query: 698 KDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 757
+LF+ G++KRSG+L YGPPGTGKTLLAKA+ATE SLNF SVKGPEL+NMYIGESE NVR
Sbjct: 1019 PELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVR 1078
Query: 758 DIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN---DSSQDL 814
+FQ+AR ARPCV+FFDELDS+AP RG GDSGGVMDR+VSQ+LAE+DG++ DS +
Sbjct: 1079 RVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGDDSGGGV 1138
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
F+IGA+NRPDL+D ALLRPGRFDKLLY+GV+ + +++ALTRKF L VSL ++A
Sbjct: 1139 FVIGATNRPDLLDQALLRPGRFDKLLYLGVSDTHEKQLTIMEALTRKFTLHPSVSLRAVA 1198
Query: 875 KKCPPNFTGADMYALCADAWFHAAKRK 901
+K P +TGAD YALC+DA A R+
Sbjct: 1199 EKLPFTYTGADFYALCSDAMLKAVTRQ 1225
Score = 68 (29.0 bits), Expect = 1.4e-101, Sum P(4) = 1.4e-101
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 920 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEG 955
V+V +D + E+ PS+S EL YE +R FEG
Sbjct: 1261 VMVTEEDLLAAHEEMIPSVSAGELAHYERVRATFEG 1296
Score = 62 (26.9 bits), Expect = 1.4e-101, Sum P(4) = 1.4e-101
Identities = 30/129 (23%), Positives = 52/129 (40%)
Query: 379 LASILAPTLCPSVLSLKF-RVAVLLHGLP-GCGKRTVVRYVARRLGIHVVEYSCHNLM-- 434
+ S+LA + LK VA+LL GK T+ R +G+H + ++++
Sbjct: 731 MRSLLAAATSKRAIHLKAPAVAILLVSTQRNIGKATLATDTCRDIGLHTFTINAYDILNE 790
Query: 435 ---ASSERKTSAALAQAFNTAQSYSPTI--LLLRDFDVFRNLVSNESLPNDQVGLSSEVA 489
S+ KT L A S P LL+R + ++ + + + S+
Sbjct: 791 GGGGGSDVKTDGTLKARAERALSCGPEFCALLIRHIEA----LTADRMATSLRSILSDAR 846
Query: 490 SVIREFTEP 498
+I TEP
Sbjct: 847 VLIATTTEP 855
Score = 47 (21.6 bits), Expect = 1.4e-101, Sum P(4) = 1.4e-101
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 175 VAYLSPLLAFNLDLHISSLKFL 196
+AY SP+L NLDL S L+ L
Sbjct: 503 LAYASPILLANLDLP-SHLRLL 523
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 888 (317.7 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
Identities = 179/343 (52%), Positives = 246/343 (71%)
Query: 625 DLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVK 684
D + ++++S I + ++ ++D+ ++ R +K ++ + VP V W+D+GGLE+ K
Sbjct: 607 DRIKRTGYDNDSIILSGPIITEQDVDVSINRIRKEKSNTIFT--VPKVNWDDIGGLEEAK 664
Query: 685 KSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 744
+ DT+QLPL +LFS GL+ RSGVLLYGPPGTGKTLLAKAVATE SL F+S+KGPEL
Sbjct: 665 TVLRDTLQLPLQFPELFSQGLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPEL 724
Query: 745 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI 804
+NMY+GESE NVR++F+KAR++ PCVIFFDELDS+AP RG S DSG VMDRVVSQ+LAE+
Sbjct: 725 LNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAEL 784
Query: 805 DGLN-DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 863
D ++ D+++ +F+IGA+NRPDL+DP+LLRPGRFDKL+Y+G+N + +L+ALT+ FK
Sbjct: 785 DSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFK 844
Query: 864 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK-----VLXXXXXXXXX------ 912
L E + L IAK C PNFTGADMYALC+DA A KRK +L
Sbjct: 845 LDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEIDLLIQASGTDLSTEEFFK 904
Query: 913 RIDQADSVVVEY--DDFVKVLRELSPSLSMAELKKYELLRDQF 953
R + DS+ + +DF+ L++L PS+S EL +YE++R QF
Sbjct: 905 RNENQDSLELRITKEDFLTSLKKLRPSISEQELHRYEMVRHQF 947
Score = 114 (45.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 91/392 (23%), Positives = 170/392 (43%)
Query: 135 PTTRKQVCDGDVHSKHSSP--TMLTFPSIHLPQDDMEL-LDRQVAYL--SPL-LAF--NL 186
P T K +V S S+P T+ ++ D +E LD V + SP + F +L
Sbjct: 431 PFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAIIFVKDL 490
Query: 187 D-LHISSLKFLVHQGKEVLESLFIAKVDDGTSGQDGKASLIKLGLQSVGQLPKYASHLRV 245
D L ISS + + G + ++ L ++K+D S Q G+ +I S+ ++P Y L
Sbjct: 491 DVLSISSDEGNIVPGSKSIQIL-LSKIDLVKSPQ-GRYIVIGT-CHSIEKIP-YEI-LSE 545
Query: 246 SFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCSSM 305
SF + LK S +E ++R E + + +N +D+ ++ DV + + +
Sbjct: 546 SFFE---------LKFSE-LEMDERLELLKIYANNVI-IDKRISLKDVALKTNSMSFGEL 594
Query: 306 ICIPCRQ------RLHRRS-DN---IIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSA 355
C+P R+ R DN I+ ++ + + ++ R+ K+ + ++P
Sbjct: 595 ECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDVDVSINRIRKEKSNTIF--TVPKV 652
Query: 356 LPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLS--LKFRVAVLLHGLPGCGKRTV 413
D I G + + DT+++ P P + S LK R VLL+G PG GK +
Sbjct: 653 NWDD--IGGLEEAKTVLRDTLQL------PLQFPELFSQGLKPRSGVLLYGPPGTGKTLL 704
Query: 414 VRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVS 473
+ VA L + V L+ ++ A + F A++ SP ++ FD ++
Sbjct: 705 AKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIF---FDELDSIAP 761
Query: 474 NESLPNDQVGLSSEVASVIREFTEPSAEDEDE 505
+ +D + V S + + ++D ++
Sbjct: 762 HRGNSSDSGNVMDRVVSQLLAELDSISKDNNK 793
Score = 84 (34.6 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
Identities = 45/189 (23%), Positives = 73/189 (38%)
Query: 287 YLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKVVAVEPSEETVLRVNCTKTAL 346
+L +F V IN ++ + + L R +D I++ V ++P + T++
Sbjct: 316 FLQSKQIFCVPINSLMANSDSVDILE-LTRNTDAYIWYSVEEIDPLNTYNIYYTNEDTSI 374
Query: 347 VLGGSIPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLP 406
VL + L P L N FV + + K+L A P + F LLHG P
Sbjct: 375 VLDTQLSHRLLPSLRKPLLN-FVKVHPPSQKLLRFCRA-FFDPQQVP-GFNPFFLLHGNP 431
Query: 407 GCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
GK V VA V S + ++ A L I+ ++D D
Sbjct: 432 FTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAIIFVKDLD 491
Query: 467 VFRNLVSNE 475
V ++ S+E
Sbjct: 492 VL-SISSDE 499
Score = 74 (31.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 32/146 (21%), Positives = 68/146 (46%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMG-PLTEQQRVEMLSQLLQPVSEL 572
I K + V ++ A + + L P++ R F + +G +E+ + ML L + +L
Sbjct: 787 ISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTF-KL 845
Query: 573 TSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKN-EPGESDLTAK-- 629
E K+ +G D++AL +DA + I++ +E+D + +DL+ +
Sbjct: 846 DETIDLNEIAKNCHPNFTG---ADMYALCSDAVLSAIKRKTNEIDLLIQASGTDLSTEEF 902
Query: 630 VAHNDNSSIAATQVMGKEDLVKAMER 655
N+N ++ KED + ++++
Sbjct: 903 FKRNENQDSLELRIT-KEDFLTSLKK 927
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 915 (327.2 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 189/394 (47%), Positives = 262/394 (66%)
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSEL 572
V + +I +++A E +P IR F+HE + E++R +L VSE
Sbjct: 866 VSAMTEILADARVIIATTTDVEQIPEAIRSMFTHEFELTAPEEKEREGILRNA---VSER 922
Query: 573 TSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAH 632
+ + + + +T+ + DL +V A ++ R + E + T+K+
Sbjct: 923 SIKLAPDVDLGTVALKTAALVAGDLVDVVERA--SVARSTRLEKLAESASKQSPTSKITV 980
Query: 633 NDNSSIAATQVMG--KEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDT 690
D V G K D A++ ++K A ++GAPK+PNV WEDVGGL +VK ++++T
Sbjct: 981 RDVLLAGGEAVRGVTKADFDAAVDAARKNFADSIGAPKIPNVSWEDVGGLTNVKDALVET 1040
Query: 691 VQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIG 750
+QLPL +LF+ G++KRSG+L YGPPGTGKTLLAKA+ATE SLNF SVKGPEL+NMYIG
Sbjct: 1041 IQLPLERPELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIG 1100
Query: 751 ESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN-- 808
ESE NVR +FQ+AR ARPCV+FFDELDS+AP RG GDSGGVMDR+VSQ+LAE+DG+N
Sbjct: 1101 ESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGG 1160
Query: 809 -DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLED 867
++S +F+IGA+NRPDL+D ALLRPGRFDK+LY+GV+ + +L+ALTRKF L D
Sbjct: 1161 EENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFALAPD 1220
Query: 868 VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+SL ++++ P +TGAD+YALC+DA A RK
Sbjct: 1221 LSLARVSERLPLTYTGADLYALCSDAMLKAITRK 1254
Score = 305 (112.4 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 72/189 (38%), Positives = 111/189 (58%)
Query: 783 RGASGD-SGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
+G SG ++ +++++ L ++G ++S +F+IGA+NRPDL+D ALLRPGRFDK+LY
Sbjct: 1136 QGDSGGVMDRIVSQLLAE-LDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLY 1194
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+GV+ + +L+ALTRKF L D+SL ++++ P +TGAD+YALC+DA A RK
Sbjct: 1195 LGVSDTHEKQATILEALTRKFALAPDLSLARVSERLPLTYTGADLYALCSDAMLKAITRK 1254
Query: 902 VLXX------------XXXXXXXRIDQAD--SVVVEYDDFVKVLRELSPSLSMAELKKYE 947
+ D +V+V +DFV EL PS+S EL+ +E
Sbjct: 1255 ATAVDEKIKQLPGGPVSTAYFFDHLSTPDDVAVMVTEEDFVAAQSELVPSVSAKELEHFE 1314
Query: 948 LLRDQFEGS 956
+R FE +
Sbjct: 1315 RIRQMFEST 1323
Score = 38 (18.4 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 667 PKVPNVKWEDVGGLEDVKKSILDT 690
P N WE G + + K ++DT
Sbjct: 717 PNTLNNGWEYWLGTKSIPKPVVDT 740
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 818 (293.0 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 185/450 (41%), Positives = 275/450 (61%)
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSEL 572
V+E+ R+ ++V A S L P I+ F I++ ++++R E+L + V E
Sbjct: 452 VQELFNRDRKHPIVVVALTSDRHLKPMIQGLFLEIINIDMPSKEERFEILRWM--HVRET 509
Query: 573 TSDT-GSEEFVKDII----GQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLT 627
+D +++ ++ + S FMPR + + N+++ ++ G+ L
Sbjct: 510 FNDIIYNQKAIEQLPLFSRENQSQFMPR-ISPSWRET-LNVLQDVAAKSQGFLLGDLQLL 567
Query: 628 AK--VAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKK 685
V + + T + K + + A +LGAPKVP V W D+GGL +K
Sbjct: 568 YDNAVRMKIRNRLGRT-TLDMSHFAKNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKD 626
Query: 686 SILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 745
I ++ LPL H L LR RSG+LLYGPPGTGKTL+AKAVATEC+L+FLSV+GPEL+
Sbjct: 627 EIQSSIGLPLKHVHLMGKNLR-RSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELL 685
Query: 746 NMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEID 805
NMY+G+SE+NVR++F +ARSA PCV+F DELDSLAP RG +GDSGGVMDRVVSQ+LAE+D
Sbjct: 686 NMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMD 745
Query: 806 GLND--SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK 863
G++D +S+ +FI+ A+NRPDLIDPALLRPGRFDKL YVG S + VL+A T++F
Sbjct: 746 GMSDGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFA 805
Query: 864 LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVE 923
L V + IA++ +GAD+Y++C++AW A +R + + ++V+V+
Sbjct: 806 LDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGHLSGTISEKELVPENVIVQ 865
Query: 924 YDDFVKVLRELSPSLSMAELKKYELLRDQF 953
+DF K + PS+S +L+ + L+ +
Sbjct: 866 EEDFTKSFNKFVPSISAKDLEYFNNLKASY 895
Score = 105 (42.0 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 55/231 (23%), Positives = 95/231 (41%)
Query: 272 EKIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQRLHRRSDNIIYFKVVAVEP 331
E ++ L NYF R + RG + + +N + ++ + K + +E
Sbjct: 229 ELTEVILSNYFNTPRLMHRGHTYRIEVNAELVGTATYAHYYLIFAHLRHV-HLKCIHLET 287
Query: 332 S-EETVLRVNCTK--TALVLGGSIPSALPPDLLISGS--NDFVPLQGDTVKILASILAPT 386
E L+ K + LV + S LP +L S + ++ K+L S +
Sbjct: 288 KGSEFELQAIVAKNFSNLVQVPASHSFLPRQVLDSMAIVENYPSGLRKPYKLLRSSVDAF 347
Query: 387 LCP--SVLSLKFRVAV-LLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSA 443
L + LS K V LL G G GK +V VA+ LG+H+ C +++ T
Sbjct: 348 LPKKSACLSSKHIFPVFLLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEM 407
Query: 444 ALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIRE 494
L F +Q P ++ +F++F + NE N+ + L S ++E
Sbjct: 408 KLKAVFAKSQVCEPLMICFHNFEIFG--IDNEG--NEDLRLLSAFHVQVQE 454
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 738 (264.8 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 179/450 (39%), Positives = 262/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VPN+ WED+GGL+DVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ S +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMS-SKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RIAILKANLRKSPISKDVDLDFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 474 (171.9 bits), Expect = 6.3e-42, P = 6.3e-42
Identities = 105/267 (39%), Positives = 160/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG+ I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 90 (36.7 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D ++ +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 739 (265.2 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 180/450 (40%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + D VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 472 (171.2 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 734 (263.4 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 342 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 400
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 401 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 449
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 450 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 502
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 503 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 562
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 563 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 621
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 622 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLDFLA 680
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 681 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 739
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 740 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 769
Score = 450 (163.5 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 102/269 (37%), Positives = 156/269 (57%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP--ARGASGD 788
E F + GPE+++ GESE N+R F++ P +IF DELD++A +
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQT 320
Query: 789 SGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
G V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D
Sbjct: 321 HGEVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDA 378
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXX 908
+ R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 379 TGRLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLE 437
Query: 909 XXXXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 438 DETIDAEVMNSLAVTMDDFRWALSQSNPS 466
Score = 91 (37.1 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 37/165 (22%), Positives = 71/165 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQ 481
++ + L +AF + +P I+ + + D + S++ P+ Q
Sbjct: 278 LAGESESNLRKAFEETEKNAPAIIFIDELDA---IASDDCFPSPQ 319
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 735 (263.8 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 472 (171.2 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 735 (263.8 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 472 (171.2 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 735 (263.8 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 354 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 412
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 413 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 461
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 462 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 514
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 515 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 574
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 575 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 633
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 634 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLA 692
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 693 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 751
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 752 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 781
Score = 472 (171.2 bits), Expect = 1.2e-41, P = 1.2e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 217 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 276
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 277 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 334
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 335 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 392
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 393 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 451
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 452 TIDAEVMNSLAVTMDDFRWALSQSNPS 478
Score = 88 (36.0 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 177 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 233
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 234 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 293
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 294 LAGESESNLRKAFEEAEKNAPAIIFIDELD 323
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 735 (263.8 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 472 (171.2 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 735 (263.8 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 472 (171.2 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 735 (263.8 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLEFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 472 (171.2 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 735 (263.8 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 179/450 (39%), Positives = 262/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L+ D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL-QIHTKNMKLSDDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RIAILKANLRKSPVAKDVDLDFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 469 (170.2 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDSTG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLSDDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 4.6e-80, Sum P(2) = 4.6e-80
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 730 (262.0 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 178/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L+ D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL-QIHTKNMKLSDDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-IKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV + +A
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RMAILKANLRKSPVAKDVDVDFLA 676
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 677 KMTN-GFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDH 735
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 736 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 765
Score = 469 (170.2 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDSTG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLSDDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 720 (258.5 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 178/447 (39%), Positives = 261/447 (58%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
++++AA + + P +RR F EI +G R+E+L ++ +L D E+
Sbjct: 338 LIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVL-RIHTKNMKLHDDVDLEQ- 395
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAAT 641
I ++ G + DL +L ++A IR+ +D + + A+V +S+A T
Sbjct: 396 ---IAAESHGHVGADLASLCSEAALQQIREKMDLIDLED---DKIDAEVL----ASLAVT 445
Query: 642 QVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF 701
E+ AM +S +A +VPN W D+GGLE VKK + + VQ P+ H D F
Sbjct: 446 M----ENFRYAMTKSSP-SALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKF 500
Query: 702 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 760
G++ GVL YGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GESE NVRDIF
Sbjct: 501 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 560
Query: 761 QKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGA 819
KARSA PCV+FFDELDS+A ARG + GD+GG DRV++Q+L E+DG+ + +++FIIGA
Sbjct: 561 DKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMG-AKKNVFIIGA 619
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
+NRPD+IDPA+LRPGR D+L+Y+ + D S RE +LKA RK L ++V L IAK
Sbjct: 620 TNRPDIIDPAILRPGRLDQLIYIPLPDDKS-REAILKANLRKSPLAKEVDLTYIAK-VTQ 677
Query: 880 NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVV-VEYDD---------FVK 929
F+GAD+ +C A A R+ + R + +S + ++ DD F +
Sbjct: 678 GFSGADLTEICQRAC-KLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEE 736
Query: 930 VLRELSPSLSMAELKKYELLRDQFEGS 956
++ S+S +++KYE+ + S
Sbjct: 737 AMKFARRSVSDNDIRKYEMFAQTLQQS 763
Score = 458 (166.3 bits), Expect = 3.7e-40, P = 3.7e-40
Identities = 103/267 (38%), Positives = 157/267 (58%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+L+YGPPGTGKTL+A+AVA
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DE+D++AP R + G
Sbjct: 258 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKT--HG 315
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DG+ SS L ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 316 EVERRIVSQLLTLMDGMKKSSH-LIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATG 373
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R VL+ T+ KL +DV L IA + + GAD+ +LC++A + K+
Sbjct: 374 RLEVLRIHTKNMKLHDDVDLEQIAAESHGH-VGADLASLCSEAALQQIREKMDLIDLEDD 432
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ S+ V ++F + + SPS
Sbjct: 433 KIDAEVLASLAVTMENFRYAMTKSSPS 459
Score = 96 (38.9 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 36/150 (24%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
I FKVV +P ++ +T + G I + L + G +D + +I
Sbjct: 158 IEFKVVLTDPEPYCIV---APETVIFCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIK 214
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P PS+ + +K +L++G PG GK + R VA G + +M+
Sbjct: 215 EMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 274
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ SP I+ + + D
Sbjct: 275 LAGESESNLRKAFEEAEKNSPAIIFIDEID 304
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 686 (246.5 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 164/388 (42%), Positives = 238/388 (61%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L ++ +L D
Sbjct: 348 RSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVL-RIHTKNMKLADDVDL 406
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E + +T G++ D+ +L ++A IR+ +D +E ++ A+V S+
Sbjct: 407 EA----LAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDE---DEIDAEVL----DSL 455
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVP--NVKWEDVGGLEDVKKSILDTVQLPLL 696
T ++ A+ S N SAL V NV W+DVGGL+++K+ + +TV+ P+L
Sbjct: 456 GVTM----DNFRFALGNS---NPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVL 508
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D ++ GL GVL YGPPGTGKTLLAKAVATE S NF+SVKGPEL++M+ GESE N
Sbjct: 509 HPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESN 568
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
+RDIF KAR+A P V+F DELDS+A ARG S GD+GG DRVV+Q+L E+DG+N + +++
Sbjct: 569 IRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMN-AKKNV 627
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
F+IGA+NRPD IDPA+LRPGR D+L+YV + D + R +L A RK L + L +IA
Sbjct: 628 FVIGATNRPDQIDPAILRPGRLDQLIYVPL-PDENARLSILNAQLRKTPLEPGLELTAIA 686
Query: 875 KKCPPNFTGADMYALCADAWFHAAKRKV 902
K F+GAD+ + A +A K +
Sbjct: 687 K-ATQGFSGADLLYIVQRAAKYAIKDSI 713
Score = 468 (169.8 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 106/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ GVL+YGPPGTGKTL+A+AVA
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G
Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKT--NG 328
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V RVVSQ+L +DG+ S ++ +I A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 329 EVERRVVSQLLTLMDGMKARS-NVVVIAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 386
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R VL+ T+ KL +DV L ++A + + GAD+ +LC++A + K+
Sbjct: 387 RLEVLRIHTKNMKLADDVDLEALAAETH-GYVGADIASLCSEAAMQQIREKMDLIDLDED 445
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ DS+ V D+F L +PS
Sbjct: 446 EIDAEVLDSLGVTMDNFRFALGNSNPS 472
Score = 91 (37.1 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 36/150 (24%), Positives = 66/150 (44%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS--GSNDFVPLQGDTVKIL 379
+ FKVV VEP E V+ + T + G + + ++ G +D + +I
Sbjct: 171 VEFKVVDVEPEEYAVVAQD---TIIHWEGEPINREDEENNMNEVGYDDIGGCRKQMAQIR 227
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K VL++G PG GK + R VA G + +M+
Sbjct: 228 EMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSK 287
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 288 MAGESESNLRKAFEEAEKNAPAIIFIDEID 317
Score = 51 (23.0 bits), Expect = 3.1e-79, Sum P(3) = 3.1e-79
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 916 QADSV-VVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 956
+ D V + + F + ++ S+S AEL++YE Q + S
Sbjct: 746 EVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKAS 787
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 718 (257.8 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
Identities = 171/449 (38%), Positives = 260/449 (57%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++ A + + P +RR F EI +G E R+E+L ++ +L D
Sbjct: 342 RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL-RIHTKNMKLAEDVDL 400
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E KD T G++ DL AL +A IR+ +D ++ ++ A++ + S+
Sbjct: 401 ERVSKD----THGYVGADLAALCTEAALQCIREKMDVIDLDD---EEIDAEILN----SM 449
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A + + A+ S N SAL +VPNV WED+GGLE+VK+ + +TVQ P+
Sbjct: 450 AVSN----DHFQTALGNS---NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVE 502
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H + F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 503 HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 562
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR + PCV+FFDELDS+A RG S GD+GG DRV++Q+L E+DG+N + + +
Sbjct: 563 VREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMN-AKKTV 621
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPALLRPGR D+L+Y+ + + S R ++ K+ RK + +DV L ++A
Sbjct: 622 FIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEES-RYQIFKSCLRKSPVAKDVDLRALA 680
Query: 875 KKCPPNFTGADMYALCADAWFHAAKRKV-------LXXXXXXXXXRIDQADSVVVEYDDF 927
K F+GAD+ +C + +A + + D+ + ++ F
Sbjct: 681 KYTQ-GFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHF 739
Query: 928 VKVLRELSPSLSMAELKKYELLRDQFEGS 956
+ ++ S+S A+++KY+ + S
Sbjct: 740 EESMKYARRSVSDADIRKYQAFAQTLQQS 768
Score = 482 (174.7 bits), Expect = 8.5e-43, P = 8.5e-43
Identities = 108/271 (39%), Positives = 158/271 (58%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++ V ++DVGG+ I + V+LPL H LF S G++ G+LLYGPPG+GKTL+A+
Sbjct: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R +
Sbjct: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
G V R+VSQ+L +DGL S + ++GA+NRP+ IDPAL R GRFD+ + +GV
Sbjct: 321 --HGEVERRIVSQLLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 377
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXX 906
++ R VL+ T+ KL EDV L ++K + GAD+ ALC +A + K+
Sbjct: 378 EIG-RLEVLRIHTKNMKLAEDVDLERVSKDTH-GYVGADLAALCTEAALQCIREKMDVID 435
Query: 907 XXXXXXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V D F L +PS
Sbjct: 436 LDDEEIDAEILNSMAVSNDHFQTALGNSNPS 466
Score = 95 (38.5 bits), Expect = 5.2e-79, Sum P(2) = 5.2e-79
Identities = 35/149 (23%), Positives = 66/149 (44%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
I FKV+ +P+E V+ + T + G + L G +D ++ +I
Sbjct: 166 IEFKVIETDPAEYCVVAPD---TEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRE 222
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL+G PG GK + R VA G + +M+
Sbjct: 223 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL 282
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P+I+ + + D
Sbjct: 283 AGESESNLRKAFEEAEKNAPSIIFIDEID 311
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 724 (259.9 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 179/452 (39%), Positives = 261/452 (57%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 396
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 397 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 445
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 446 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 498
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 499 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 558
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 559 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 617
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLE--DVSLYS 872
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + + DV L
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKAGDVDLEF 676
Query: 873 IAKKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEY 924
+AK F+GAD+ +C A A + R+ +++ D V +
Sbjct: 677 LAKMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRR 735
Query: 925 DDFVKVLRELSPSLSMAELKKYELLRDQFEGS 956
D F + +R S+S +++KYE+ + S
Sbjct: 736 DHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 767
Score = 472 (171.2 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 105/267 (39%), Positives = 159/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R + G
Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HG 318
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 319 EVERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 376
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPS 462
Score = 88 (36.0 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P I+ + + D
Sbjct: 278 LAGESESNLRKAFEEAEKNAPAIIFIDELD 307
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 721 (258.9 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 182/447 (40%), Positives = 265/447 (59%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L ++ +L D
Sbjct: 358 RSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEIL-RIHTKNMKLADDVDL 416
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ I +T G++ DL +L ++A IR+ +D +E ++ A+V S+
Sbjct: 417 EQ----IAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE---DEIDAEVL----DSL 465
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
T ++ A+ S N SAL +VPNV+WED+GGLE+VK+ + +TVQ+P++
Sbjct: 466 GVTM----DNFRFALGSS---NPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVM 518
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
+ + F G+ GVL +GPPGTGKTLLAKA+A ECS NF+SVKGPEL++M+ GESE N
Sbjct: 519 YAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESN 578
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VRDIF KAR+A PCV+F DELDS+A ARGAS GDSGG DRVV+Q+L E+DG+N S +++
Sbjct: 579 VRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGG-DRVVNQLLTEMDGVN-SKKNV 636
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
F+IGA+NRPD IDPAL+RPGR D+L+YV + D R +L+ R + EDV L ++A
Sbjct: 637 FVIGATNRPDQIDPALMRPGRLDQLIYVPL-PDEEARFSILQTQLRHTPVAEDVDLRAVA 695
Query: 875 KKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFV------ 928
K F+GAD+ + A A K + AD VV++ D V
Sbjct: 696 K-ATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRH 754
Query: 929 ---KVLRELSPSLSMAELKKYELLRDQ 952
+ ++ S+S AE+++YE Q
Sbjct: 755 HVEEAMKMARRSVSDAEVRRYEAYAHQ 781
Score = 463 (168.0 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 105/267 (39%), Positives = 158/267 (59%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF S G++ G+L+YGPPGTGKTL+A+AVA
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G
Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT--NG 338
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V RVVSQ+L +DG+ S ++ ++ A+NRP+ IDPAL R GRFD+ + VG+ D +
Sbjct: 339 EVERRVVSQLLTLMDGMKARS-NVVVMAATNRPNSIDPALRRFGRFDREVDVGI-PDPTG 396
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L IA + + G+D+ +LC++A + K+
Sbjct: 397 RLEILRIHTKNMKLADDVDLEQIAAETH-GYVGSDLASLCSEAAMQQIREKMDMIDLDED 455
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ DS+ V D+F L +PS
Sbjct: 456 EIDAEVLDSLGVTMDNFRFALGSSNPS 482
Score = 90 (36.7 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 385 PTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAA 444
P L S+ +K +L++G PG GK + R VA G + +M+ ++ +
Sbjct: 247 PQLFKSI-GIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN 305
Query: 445 LAQAFNTAQSYSPTILLLRDFD 466
L +AF A+ SP I+ + + D
Sbjct: 306 LRKAFEEAEKNSPAIIFIDEID 327
Score = 38 (18.4 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 342 TKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVL 401
T TA++ P++L D + N + L +T++ L T+ K V ++
Sbjct: 32 TATAILRKKRKPNSLVVDDATNDDNSVITLSSNTMETLQLFRGDTVVVKGKRRKDTVLIV 91
Query: 402 L 402
L
Sbjct: 92 L 92
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 689 (247.6 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 163/420 (38%), Positives = 245/420 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R ++++AA + + +RR F EI +G R+E+L ++ +L D
Sbjct: 344 RSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL-RIHTKNMKLADDVDL 402
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ I + GF+ DL +L ++A IR+ +D + + A+V + S+
Sbjct: 403 EQ----IANECHGFVGADLASLCSEAALQQIREKMELIDLED---DQIDAEVLN----SL 451
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHK 698
A T E+ A +S +A + PN W D+GGL++VK+ + + VQ P+ H
Sbjct: 452 AVTM----ENFRFAQGKSSP-SALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHP 506
Query: 699 DLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 757
+ + G++ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE NVR
Sbjct: 507 EKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 566
Query: 758 DIFQKARSARPCVIFFDELDSLAPARG--ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLF 815
D+F KAR+A PCV+FFDELDS+A ARG A GD GG DRV++Q+L E+DG+N + +++F
Sbjct: 567 DVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMN-AKKNVF 625
Query: 816 IIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAK 875
IIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R ++LKA RK L +D+ L +AK
Sbjct: 626 IIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RHQILKASLRKTPLSKDLDLTFLAK 684
Query: 876 KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELS 935
F+GAD+ +C A A + + + QA + DD V + E++
Sbjct: 685 NTV-GFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEIT 743
Score = 453 (164.5 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 100/268 (37%), Positives = 159/268 (59%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
++ ++D+GG+ I + V+LPL H LF + G++ G+LL+GPPGTGKTL+A+AVA
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA 265
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
E F + GPE+++ GESE N+R F++ +P ++F DE+D++AP R + +
Sbjct: 266 NETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT--N 323
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
G V R+VSQ+L +DG+ S +L +I A+NRP+ ID AL R GRFD+ + +G+ V
Sbjct: 324 GEVERRIVSQLLTLMDGVKGRS-NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 382
Query: 850 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXX 909
R +L+ T+ KL +DV L IA +C F GAD+ +LC++A + K+
Sbjct: 383 -RLEILRIHTKNMKLADDVDLEQIANECH-GFVGADLASLCSEAALQQIREKMELIDLED 440
Query: 910 XXXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V ++F + SPS
Sbjct: 441 DQIDAEVLNSLAVTMENFRFAQGKSSPS 468
Score = 84 (34.6 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 34/149 (22%), Positives = 60/149 (40%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKVV EP+ + V+ G I + + G +D ++ +I
Sbjct: 167 VEFKVVETEPAPACI--VSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKE 224
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL G PG GK + R VA G + +M+
Sbjct: 225 MVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKM 284
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF + P IL + + D
Sbjct: 285 SGESESNLRKAFEECEKNQPAILFIDEID 313
Score = 48 (22.0 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 226 IKLG-LQSVGQLPKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYF-E 283
I+LG + S+ P + R+ + I + T+E L G+ D+ L YF E
Sbjct: 100 IRLGDVVSITPAPNLSYGTRIHVLPIDD--TIEGLTGNL----------FDVFLKPYFLE 147
Query: 284 VDRYLARGDVFSV 296
R L +GD+F+V
Sbjct: 148 AYRPLHKGDIFTV 160
Score = 45 (20.9 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 471 LVSNESLPNDQVGLSSEVASVIR 493
+VS+ES PN++V ++ V + +R
Sbjct: 77 IVSDESCPNEKVRMNRVVRNNLR 99
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 689 (247.6 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 163/420 (38%), Positives = 245/420 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R ++++AA + + +RR F EI +G R+E+L ++ +L D
Sbjct: 344 RSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL-RIHTKNMKLADDVDL 402
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ I + GF+ DL +L ++A IR+ +D + + A+V + S+
Sbjct: 403 EQ----IANECHGFVGADLASLCSEAALQQIREKMELIDLED---DQIDAEVLN----SL 451
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHK 698
A T E+ A +S +A + PN W D+GGL++VK+ + + VQ P+ H
Sbjct: 452 AVTM----ENFRFAQGKSSP-SALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHP 506
Query: 699 DLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 757
+ + G++ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE NVR
Sbjct: 507 EKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 566
Query: 758 DIFQKARSARPCVIFFDELDSLAPARG--ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLF 815
D+F KAR+A PCV+FFDELDS+A ARG A GD GG DRV++Q+L E+DG+N + +++F
Sbjct: 567 DVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMN-AKKNVF 625
Query: 816 IIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAK 875
IIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R ++LKA RK L +D+ L +AK
Sbjct: 626 IIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RHQILKASLRKTPLSKDLDLTFLAK 684
Query: 876 KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELS 935
F+GAD+ +C A A + + + QA + DD V + E++
Sbjct: 685 NTV-GFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEIT 743
Score = 453 (164.5 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 100/268 (37%), Positives = 159/268 (59%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
++ ++D+GG+ I + V+LPL H LF + G++ G+LL+GPPGTGKTL+A+AVA
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA 265
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
E F + GPE+++ GESE N+R F++ +P ++F DE+D++AP R + +
Sbjct: 266 NETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT--N 323
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
G V R+VSQ+L +DG+ S +L +I A+NRP+ ID AL R GRFD+ + +G+ V
Sbjct: 324 GEVERRIVSQLLTLMDGVKGRS-NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 382
Query: 850 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXX 909
R +L+ T+ KL +DV L IA +C F GAD+ +LC++A + K+
Sbjct: 383 -RLEILRIHTKNMKLADDVDLEQIANECH-GFVGADLASLCSEAALQQIREKMELIDLED 440
Query: 910 XXXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V ++F + SPS
Sbjct: 441 DQIDAEVLNSLAVTMENFRFAQGKSSPS 468
Score = 84 (34.6 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 34/149 (22%), Positives = 60/149 (40%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKVV EP+ + V+ G I + + G +D ++ +I
Sbjct: 167 VEFKVVETEPAPACI--VSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKE 224
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL G PG GK + R VA G + +M+
Sbjct: 225 MVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKM 284
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF + P IL + + D
Sbjct: 285 SGESESNLRKAFEECEKNQPAILFIDEID 313
Score = 48 (22.0 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 226 IKLG-LQSVGQLPKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDLALHNYF-E 283
I+LG + S+ P + R+ + I + T+E L G+ D+ L YF E
Sbjct: 100 IRLGDVVSITPAPNLSYGTRIHVLPIDD--TIEGLTGNL----------FDVFLKPYFLE 147
Query: 284 VDRYLARGDVFSV 296
R L +GD+F+V
Sbjct: 148 AYRPLHKGDIFTV 160
Score = 45 (20.9 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 471 LVSNESLPNDQVGLSSEVASVIR 493
+VS+ES PN++V ++ V + +R
Sbjct: 77 IVSDESCPNEKVRMNRVVRNNLR 99
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 707 (253.9 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 165/388 (42%), Positives = 235/388 (60%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++ A + + P +RR F EI +G E R+E+L ++ +L D
Sbjct: 341 RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL-RIHTKNMKLAEDVDL 399
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E KD T G++ DL AL +A IR+ +D + + A++ + S+
Sbjct: 400 ERISKD----THGYVGADLAALCTEAALQCIREKMDVIDLED---DSIDAEILN----SM 448
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A + E A+ S N SAL +VPNV WED+GGLE+VK+ + +TVQ P+
Sbjct: 449 AVSN----EHFHTALGNS---NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVE 501
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H + F G+ GVL YGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GESE N
Sbjct: 502 HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 561
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR + PCV+FFDELDS+A RG S GD+GG DRV++Q+L E+DG+N + + +
Sbjct: 562 VREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMN-AKKTV 620
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+ID ALLRPGR D+L+Y+ + + S R + KA RK + +DV + ++A
Sbjct: 621 FIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS-RLNIFKACLRKSPVAKDVDVTALA 679
Query: 875 KKCPPNFTGADMYALCADAWFHAAKRKV 902
K F+GAD+ +C A +A + +
Sbjct: 680 KYTQ-GFSGADITEICQRACKYAIRENI 706
Score = 481 (174.4 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 108/271 (39%), Positives = 159/271 (58%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++ V ++DVGG+ I + V+LPL H LF S G++ G+LLYGPPG+GKTL+A+
Sbjct: 200 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 259
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R +
Sbjct: 260 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 319
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
+G V R+VSQ+L +DGL S + ++GA+NRP+ IDPAL R GRFD+ + +GV
Sbjct: 320 --NGEVERRIVSQLLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXX 906
++ R VL+ T+ KL EDV L I+K + GAD+ ALC +A + K+
Sbjct: 377 EIG-RLEVLRIHTKNMKLAEDVDLERISKDTH-GYVGADLAALCTEAALQCIREKMDVID 434
Query: 907 XXXXXXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V + F L +PS
Sbjct: 435 LEDDSIDAEILNSMAVSNEHFHTALGNSNPS 465
Score = 95 (38.5 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 34/149 (22%), Positives = 66/149 (44%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKV+ +P+E V+ + T + G + L G +D ++ +I
Sbjct: 165 VEFKVIETDPAEYCVVAPD---TEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRE 221
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL+G PG GK + R VA G + +M+
Sbjct: 222 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL 281
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P+I+ + + D
Sbjct: 282 AGESESNLRKAFEEAEKNAPSIIFIDEID 310
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 708 (254.3 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
Identities = 173/450 (38%), Positives = 258/450 (57%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 356 RSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL-QIHTKNMKLGDDVDL 414
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ I +T G++ D+ AL ++A IR+ +D +E + A+V S+
Sbjct: 415 EQ----IAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDE---DTIDAEVL----DSL 463
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHK 698
T E+ A+ S + +VPNV+WED+GGL++VK+ + + VQ P+ H
Sbjct: 464 GVTM----ENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHP 519
Query: 699 DLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 757
+ F GL GVL YGPPGTGKT+LAKAVA EC+ NF+SVKGPEL++M+ GESE N+R
Sbjct: 520 EKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIR 579
Query: 758 DIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDLFI 816
DIF KAR+A PC++F DELDS+A ARG S GD+GG DRVV+Q+L E+DG+ S +++F+
Sbjct: 580 DIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMT-SKKNVFV 638
Query: 817 IGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKK 876
IGA+NRP+ +DPAL RPGR D L+YV + ++ R +LKA RK + +DV L IA K
Sbjct: 639 IGATNRPEQLDPALCRPGRLDSLIYVPLPDELG-RLSILKAQLRKTPVSDDVDLQYIANK 697
Query: 877 CPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXR-------IDQ-ADSVVVEYDD-- 926
F+GAD+ + A A K + +D+ A+ V E
Sbjct: 698 TH-GFSGADLGFITQRAVKIAIKESITADINRTKALEAAGEDVPMDEDAEDPVPELTKRH 756
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +++ S+S E+++YE Q + +
Sbjct: 757 FEEAMQQARKSVSDVEIRRYEAFAQQMKNA 786
Score = 461 (167.3 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 109/284 (38%), Positives = 167/284 (58%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF S G++ GVLLYGPPGTGKTL+A+AVA
Sbjct: 219 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVAN 278
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G
Sbjct: 279 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT--NG 336
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V RVVSQ+L +DG+ S ++ ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 337 EVERRVVSQLLTLMDGMKARS-NVVVMAATNRPNSIDPALRRFGRFDREVDIGI-PDPTG 394
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L IA + + G+D+ ALC++A + K+
Sbjct: 395 RLEILQIHTKNMKLGDDVDLEQIAAETH-GYVGSDVAALCSEAAMQQIREKMDLIDLDED 453
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFE 954
+ DS+ V ++F L +PS ++ E+ E+ ++E
Sbjct: 454 TIDAEVLDSLGVTMENFRFALGVSNPS-ALREVAVVEVPNVRWE 496
Score = 93 (37.8 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 385 PTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAA 444
P L S+ +K VLL+G PG GK + R VA G + +M+ ++ +
Sbjct: 245 PQLFKSI-GIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN 303
Query: 445 LAQAFNTAQSYSPTILLLRDFD 466
L +AF A+ SP I+ + + D
Sbjct: 304 LRKAFEEAEKNSPAIIFIDEID 325
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 672 (241.6 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 159/379 (41%), Positives = 228/379 (60%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R QV+++AA + + P +RR F EI +G + R E+L ++ +L+ D
Sbjct: 341 RGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEIL-RIHTKNMKLSPDVKL 399
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
EE + T GF+ DL L +A IR+ +D E ++ K S+
Sbjct: 400 EELASN----THGFVGADLAQLCTEAALTCIREKMDVIDL----EDEIIDKEVLE---SM 448
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
TQ + A+ N S+L +VPNVKW+D+GGL++VK ++ + + P+
Sbjct: 449 CVTQ----DHFNMALGTC---NPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPID 501
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKAVA+ECS NF+S+KGPEL+ M+ GESE N
Sbjct: 502 HPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEAN 561
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR++F KAR+A PCV+FFDELDS+ RG+S GD G DRV++Q+L EIDG+ ++L
Sbjct: 562 VREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPK-KNL 620
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
F IGA+NRP+L+D ALLRPGR D+L+Y+ + D+ R +L A+ RK + E+V + +A
Sbjct: 621 FFIGATNRPELLDEALLRPGRLDQLIYIPL-PDLGARISILTAILRKCPVAENVPIDFLA 679
Query: 875 KKCPPNFTGADMYALCADA 893
+K F+GAD+ LC A
Sbjct: 680 QKTA-GFSGADLAELCQRA 697
Score = 442 (160.7 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 104/276 (37%), Positives = 156/276 (56%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
K+ + ++D+GG + I + ++LPL H LF + G++ GVLLYGPPG+GKT +A+
Sbjct: 200 KLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIAR 259
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA E F + GPE+++ GE+E N+R F++A P +IF DE+DS+AP R +
Sbjct: 260 AVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKT 319
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
+G V RVVSQ+L +DG+ Q + +I A+NR + IDPAL R GRFD+ + +GV
Sbjct: 320 --NGEVERRVVSQLLTLMDGIKSRGQ-VVVIAATNRQNSIDPALRRFGRFDREIDIGVPD 376
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXX 906
D + R +L+ T+ KL DV L +A F GAD+ LC +A + K+
Sbjct: 377 D-NGRFEILRIHTKNMKLSPDVKLEELASNTH-GFVGADLAQLCTEAALTCIREKMDVID 434
Query: 907 XXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 942
+ +S+ V D F L +PS S+ E
Sbjct: 435 LEDEIIDKEVLESMCVTQDHFNMALGTCNPS-SLRE 469
Score = 102 (41.0 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 40/148 (27%), Positives = 61/148 (41%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTVKILAS 381
+ FKVV V+P + + V+ G I L G +D + +I
Sbjct: 165 VEFKVVEVDPDDFCI--VSPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREM 222
Query: 382 ILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSE 438
I P P + L +K VLL+G PG GK + R VA G + +M+
Sbjct: 223 IELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMA 282
Query: 439 RKTSAALAQAFNTAQSYSPTILLLRDFD 466
+ A L +AF A+ SP I+ + + D
Sbjct: 283 GEAEANLRRAFEEAEKNSPAIIFIDEID 310
Score = 43 (20.2 bits), Expect = 2.3e-71, Sum P(3) = 2.3e-71
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 265 IEAEDRQEKIDLALHNYFEVDRYLARG 291
I A +RQ ID AL + DR + G
Sbjct: 347 IAATNRQNSIDPALRRFGRFDREIDIG 373
Score = 41 (19.5 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 608 LIRKSNSE--VDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDL 649
L+ ++N E V K + S L + A ND++S+ A E+L
Sbjct: 10 LVDENNGENKVPKKK-NLSRLIVEEATNDDNSVVALNTKRMEEL 52
Score = 38 (18.4 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 937 SLSMAELKKYELLRDQFE 954
S+S A+L KY+ R +F+
Sbjct: 773 SVSQADLIKYDNFRIKFD 790
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 672 (241.6 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 159/379 (41%), Positives = 228/379 (60%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R QV+++AA + + P +RR F EI +G + R E+L ++ +L+ D
Sbjct: 341 RGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEIL-RIHTKNMKLSPDVKL 399
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
EE + T GF+ DL L +A IR+ +D E ++ K S+
Sbjct: 400 EELASN----THGFVGADLAQLCTEAALTCIREKMDVIDL----EDEIIDKEVLE---SM 448
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
TQ + A+ N S+L +VPNVKW+D+GGL++VK ++ + + P+
Sbjct: 449 CVTQ----DHFNMALGTC---NPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPID 501
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKAVA+ECS NF+S+KGPEL+ M+ GESE N
Sbjct: 502 HPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEAN 561
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR++F KAR+A PCV+FFDELDS+ RG+S GD G DRV++Q+L EIDG+ ++L
Sbjct: 562 VREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPK-KNL 620
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
F IGA+NRP+L+D ALLRPGR D+L+Y+ + D+ R +L A+ RK + E+V + +A
Sbjct: 621 FFIGATNRPELLDEALLRPGRLDQLIYIPL-PDLGARISILTAILRKCPVAENVPIDFLA 679
Query: 875 KKCPPNFTGADMYALCADA 893
+K F+GAD+ LC A
Sbjct: 680 QKTA-GFSGADLAELCQRA 697
Score = 442 (160.7 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 104/276 (37%), Positives = 156/276 (56%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
K+ + ++D+GG + I + ++LPL H LF + G++ GVLLYGPPG+GKT +A+
Sbjct: 200 KLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIAR 259
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA E F + GPE+++ GE+E N+R F++A P +IF DE+DS+AP R +
Sbjct: 260 AVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKT 319
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
+G V RVVSQ+L +DG+ Q + +I A+NR + IDPAL R GRFD+ + +GV
Sbjct: 320 --NGEVERRVVSQLLTLMDGIKSRGQ-VVVIAATNRQNSIDPALRRFGRFDREIDIGVPD 376
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXX 906
D + R +L+ T+ KL DV L +A F GAD+ LC +A + K+
Sbjct: 377 D-NGRFEILRIHTKNMKLSPDVKLEELASNTH-GFVGADLAQLCTEAALTCIREKMDVID 434
Query: 907 XXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 942
+ +S+ V D F L +PS S+ E
Sbjct: 435 LEDEIIDKEVLESMCVTQDHFNMALGTCNPS-SLRE 469
Score = 102 (41.0 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 40/148 (27%), Positives = 61/148 (41%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTVKILAS 381
+ FKVV V+P + + V+ G I L G +D + +I
Sbjct: 165 VEFKVVEVDPDDFCI--VSPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREM 222
Query: 382 ILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSE 438
I P P + L +K VLL+G PG GK + R VA G + +M+
Sbjct: 223 IELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMA 282
Query: 439 RKTSAALAQAFNTAQSYSPTILLLRDFD 466
+ A L +AF A+ SP I+ + + D
Sbjct: 283 GEAEANLRRAFEEAEKNSPAIIFIDEID 310
Score = 43 (20.2 bits), Expect = 2.3e-71, Sum P(3) = 2.3e-71
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 265 IEAEDRQEKIDLALHNYFEVDRYLARG 291
I A +RQ ID AL + DR + G
Sbjct: 347 IAATNRQNSIDPALRRFGRFDREIDIG 373
Score = 41 (19.5 bits), Expect = 3.5e-37, Sum P(3) = 3.5e-37
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 608 LIRKSNSE--VDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDL 649
L+ ++N E V K + S L + A ND++S+ A E+L
Sbjct: 10 LVDENNGENKVPKKK-NLSRLIVEEATNDDNSVVALNTKRMEEL 52
Score = 38 (18.4 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 937 SLSMAELKKYELLRDQFE 954
S+S A+L KY+ R +F+
Sbjct: 773 SVSQADLIKYDNFRIKFD 790
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 711 (255.3 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 174/451 (38%), Positives = 261/451 (57%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + +RR F EI +G R+E+L Q+ +L+ D
Sbjct: 340 RAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEIL-QIHTKNMKLSEDVDL 398
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPG-ESDLTAKVAHNDNSS 637
E+ I +T G + DL AL ++A IRK + +D + ++DL +S
Sbjct: 399 EQ----ISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLL--------NS 446
Query: 638 IAATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPL 695
+A T +D A+ +S N SAL +VP+V WED+GGL++VK+ + + VQ P+
Sbjct: 447 LAVTM----DDFKWALSQS---NPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYPV 499
Query: 696 LHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEK 754
+ D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE
Sbjct: 500 EYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEA 559
Query: 755 NVRDIFQKARSARPCVIFFDELDSLAPARGA-SGDSGGVMDRVVSQMLAEIDGLNDSSQD 813
NVRD+F KAR A PC++FFDELDS+A ARG +GD+GG DRV++Q+L E+DG+ + ++
Sbjct: 560 NVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNK-KN 618
Query: 814 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 873
+FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + D+ R +L+A RK + +DV L +
Sbjct: 619 VFIIGATNRPDIIDPAILRPGRLDQLIYIPL-PDMPSRTAILRANLRKSPVAKDVDLMYL 677
Query: 874 AKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRI-------DQADSVV-VEYD 925
+K F+GAD+ +C A A + + + D D V + D
Sbjct: 678 SK-ITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKETAMDDDYDPVPEIRKD 736
Query: 926 DFVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 737 HFEEAMRFARRSVSDNDIRKYEMFAQTLQQS 767
Score = 467 (169.5 bits), Expect = 3.7e-41, P = 3.7e-41
Identities = 104/268 (38%), Positives = 159/268 (59%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
++ ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 202 DIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVA 261
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
E F + GPE+++ GESE N+R F++A P +IF DELD++AP R +
Sbjct: 262 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--H 319
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
G V R+VSQ+L +DGL + + ++ A+NRP+ +D AL R GRFD+ + +G+ D +
Sbjct: 320 GEVERRIVSQLLTLMDGLKQRAH-VVVMAATNRPNSVDAALRRFGRFDREIDIGI-PDST 377
Query: 850 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXX 909
R +L+ T+ KL EDV L I+ + + GAD+ ALC++A A ++K+
Sbjct: 378 GRLEILQIHTKNMKLSEDVDLEQISAETHGH-VGADLAALCSEAALQAIRKKMTLIDLED 436
Query: 910 XXXRIDQADSVVVEYDDFVKVLRELSPS 937
D +S+ V DDF L + +PS
Sbjct: 437 DSIDADLLNSLAVTMDDFKWALSQSNPS 464
Score = 88 (36.0 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LL+G PG GK V R VA G + +M+ ++ + L +AF A+ +P I
Sbjct: 243 ILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI 302
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 303 IFIDELD 309
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 703 (252.5 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 164/389 (42%), Positives = 233/389 (59%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++ A + + P +RR F EI +G E R+E+L ++ +L D
Sbjct: 341 RAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL-RIHTKNMKLAEDVDL 399
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E KD T G++ DL AL +A IR+ +D + + A++ + S+
Sbjct: 400 ERISKD----THGYVGADLAALCTEAALQCIREKMDVIDLED---DSIDAEILN----SM 448
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T E A+ S N SAL +VPNV W D+GGLE+VK+ + +TVQ P+
Sbjct: 449 AVTN----EHFHTALGNS---NPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVE 501
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H + F G+ GVL YGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GESE N
Sbjct: 502 HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 561
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARG--ASGDSGGVMDRVVSQMLAEIDGLNDSSQD 813
VR+IF KAR + PCV+FFDELDS+A RG + GD GG DRV++Q+L E+DG+N + +
Sbjct: 562 VREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMN-AKKT 620
Query: 814 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 873
+FIIGA+NRPD+ID ALLRPGR D+L+Y+ + + S R + KA RK + +DV + ++
Sbjct: 621 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS-RLNIFKAALRKSPIAKDVDIGAL 679
Query: 874 AKKCPPNFTGADMYALCADAWFHAAKRKV 902
AK F+GAD+ +C A +A + +
Sbjct: 680 AKYTQ-GFSGADITEICQRACKYAIRENI 707
Score = 481 (174.4 bits), Expect = 1.0e-42, P = 1.0e-42
Identities = 108/271 (39%), Positives = 160/271 (59%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++ +V ++DVGG+ I + V+LPL H LF S G++ G+LLYGPPG+GKTL+A+
Sbjct: 200 RLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 259
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R +
Sbjct: 260 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 319
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
+G V R+VSQ+L +DGL S + ++GA+NRP+ IDPAL R GRFD+ + +GV
Sbjct: 320 --NGEVERRIVSQLLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXX 906
++ R VL+ T+ KL EDV L I+K + GAD+ ALC +A + K+
Sbjct: 377 EIG-RLEVLRIHTKNMKLAEDVDLERISKDTH-GYVGADLAALCTEAALQCIREKMDVID 434
Query: 907 XXXXXXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V + F L +PS
Sbjct: 435 LEDDSIDAEILNSMAVTNEHFHTALGNSNPS 465
Score = 95 (38.5 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 34/149 (22%), Positives = 66/149 (44%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKV+ +P+E V+ + T + G + L G +D ++ +I
Sbjct: 165 VEFKVIETDPAEYCVVAPD---TEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRE 221
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL+G PG GK + R VA G + +M+
Sbjct: 222 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL 281
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P+I+ + + D
Sbjct: 282 AGESESNLRKAFEEAEKNAPSIIFIDEID 310
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 706 (253.6 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 158/370 (42%), Positives = 229/370 (61%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+LS + G
Sbjct: 359 RSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILS-----IHTKNMKLGE 413
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
+ ++ I +T G++ DL +L ++A IR+ +D +E + A+V S+
Sbjct: 414 DVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDE---DTIDAEVL----DSL 466
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHK 698
T E+ A+ S + +VPNV+WED+GGLE+VK+ ++++VQ P+ H
Sbjct: 467 GVTM----ENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHP 522
Query: 699 DLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 757
+ F GL GVL YGPPGTGKT+LAKAVA EC+ NF+SVKGPEL++M+ GESE N+R
Sbjct: 523 EKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIR 582
Query: 758 DIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDLFI 816
DIF KAR+A PCV+F DELDS+A +RG S GD+GG DRVV+Q+L E+DG+ S +++F+
Sbjct: 583 DIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMT-SKKNVFV 641
Query: 817 IGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKK 876
IGA+NRP+ +D AL+RPGR D L+YV + S RE +LKA RK + DV + IA K
Sbjct: 642 IGATNRPEQLDAALVRPGRLDTLVYVPLPDQAS-REGILKAQLRKTPVASDVDIEFIASK 700
Query: 877 CPPNFTGADM 886
F+GAD+
Sbjct: 701 TH-GFSGADL 709
Score = 460 (167.0 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 107/284 (37%), Positives = 167/284 (58%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF S G++ G+L+YGPPGTGKTL+A+AVA
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G
Sbjct: 282 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT--NG 339
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V RVVSQ+L +DG+ S ++ ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 340 EVERRVVSQLLTLMDGMKARS-NVVVMAATNRPNSIDPALRRFGRFDREVDIGI-PDPTG 397
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L T+ KL EDV L +IA + + G+D+ +LC++A + K+
Sbjct: 398 RLEILSIHTKNMKLGEDVDLETIAAETH-GYVGSDLASLCSEAAMQQIREKMDLIDLDED 456
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFE 954
+ DS+ V ++F L +PS ++ E+ E+ ++E
Sbjct: 457 TIDAEVLDSLGVTMENFRYALGVSNPS-ALREVAVVEVPNVRWE 499
Score = 90 (36.7 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 385 PTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAA 444
P L S+ +K +L++G PG GK + R VA G + +M+ ++ +
Sbjct: 248 PQLFKSI-GIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN 306
Query: 445 LAQAFNTAQSYSPTILLLRDFD 466
L +AF A+ SP I+ + + D
Sbjct: 307 LRKAFEEAEKNSPAIIFIDEID 328
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 685 (246.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 167/443 (37%), Positives = 255/443 (57%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++ A + + P +RR F EI + R+E++ + + +T
Sbjct: 336 RAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIMR--IHTKNMKLDETVD 393
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E V + +T G++ DL AL ++ IR+ +D + ++A++ S+
Sbjct: 394 LEAVAN---ETHGYVGADLAALCTESALQCIREKMDVIDLED---ETISAEILE----SM 443
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
+ TQ + A+ S N SAL +VP WED+GGLE VK+ + +TVQ P+
Sbjct: 444 SVTQ----DHFRTALTLS---NPSALRETVVEVPTTTWEDIGGLEGVKRELRETVQYPVE 496
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H + F G++ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 497 HPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 556
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR++F KAR A PCV+FFDELDS+A +RG+S GD+GG DRV++Q+L E+DG+N + +++
Sbjct: 557 VRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMN-AKKNV 615
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + D+ R +LKA K + +DV L +
Sbjct: 616 FIIGATNRPDIIDPAILRPGRLDQLIYIPL-PDLPSRVAILKACLNKSPVAKDVDLEFLG 674
Query: 875 KKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVV----------VEY 924
+K F+GAD+ +C A A R+ + R + D+ + +
Sbjct: 675 QKTQ-GFSGADLTEICQRAC-KLAIRESIEKDIESTKARQESGDTKMEDDSVDPVPEITR 732
Query: 925 DDFVKVLRELSPSLSMAELKKYE 947
D F + +R S+S +++KYE
Sbjct: 733 DHFQEAMRSARRSVSDNDIRKYE 755
Score = 447 (162.4 bits), Expect = 5.9e-39, P = 5.9e-39
Identities = 100/271 (36%), Positives = 156/271 (57%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++ V ++D+GG+ I + V+LPL H LF + G++ G+LLYGPPG GKT++A+
Sbjct: 195 RLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIAR 254
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R +
Sbjct: 255 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 314
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
G V R+VSQ+L +DGL S + ++GA+NRP+ IDPAL R GRFD+ + + +
Sbjct: 315 --QGEVERRIVSQLLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDITI-P 370
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXX 906
D + R +++ T+ KL E V L ++A + + GAD+ ALC ++ + K+
Sbjct: 371 DATGRLEIMRIHTKNMKLDETVDLEAVANETH-GYVGADLAALCTESALQCIREKMDVID 429
Query: 907 XXXXXXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V D F L +PS
Sbjct: 430 LEDETISAEILESMSVTQDHFRTALTLSNPS 460
Score = 108 (43.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS-GSNDFVPLQGDTVKILA 380
+ FKVV +P E ++ +T + G D L G +D ++ +I
Sbjct: 160 VEFKVVETDPGEYCIV---APETFIHCEGEAVKREDEDRLDEVGYDDIGGVRKQLGQIRE 216
Query: 381 SILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASS 437
+ P P + + +K +LL+G PGCGK + R VA G + +M+
Sbjct: 217 LVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKL 276
Query: 438 ERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ +P+I+ + + D
Sbjct: 277 AGESESNLRKAFEEAEKNAPSIIFIDEID 305
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 734 (263.4 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 336 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 394
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 395 EQ----VANETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 443
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 444 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 496
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 497 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 556
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 557 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 615
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 616 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLDFLA 674
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 675 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 733
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 734 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 763
Score = 385 (140.6 bits), Expect = 4.1e-32, P = 4.1e-32
Identities = 95/267 (35%), Positives = 144/267 (53%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG I + V+LPL H LF + G++ G+LLYGPPGTGKTL+A+AVA
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GE E R A F D P+ G+
Sbjct: 261 ETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKS-DDCFPSPQTHGE-- 317
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D +
Sbjct: 318 -VERRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATG 374
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +A + + GAD+ ALC++A A ++K+
Sbjct: 375 RLEILQIHTKNMKLADDVDLEQVANETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDE 433
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V DDF L + +PS
Sbjct: 434 TIDAEVMNSLAVTMDDFRWALSQSNPS 460
Score = 58 (25.5 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 33/152 (21%), Positives = 60/152 (39%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +PS ++ + T + G I + L G +D + +I
Sbjct: 161 VEFKVVETDPSPYCIVAPD---TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIK 217
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P++ + +K +LL+G PG GK + R VA G + +M+
Sbjct: 218 EMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 277
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFDVF 468
+ +A + + A T + + D F
Sbjct: 278 LAGEGESACRKKISPAPPPLKTAGIFKSDDCF 309
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 692 (248.7 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 183/559 (32%), Positives = 295/559 (52%)
Query: 362 ISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRL 421
+ G +D V GD V + + L +V + VLLHG PGCGK + A L
Sbjct: 167 LGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPR---GVLLHGPPGCGKTMIANAFAAEL 223
Query: 422 GIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQ 481
G+ + S ++++ ++ AL + F A+ +P ++ + + D N Q
Sbjct: 224 GVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAI-----TPKRENSQ 278
Query: 482 VGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIR 541
+ + + + + A +EK + V+++AA + + L +R
Sbjct: 279 REMEKRIVAQLLTCMDDLA---------------LEKTDGKPVIVLAATNRPDSLDAALR 323
Query: 542 RC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHA 599
R F EI+M +E R ++L L + + L D +F K + +T GF+ DL+
Sbjct: 324 RGGRFDKEINMTVPSEPVREQILRALTRKM-RLVDDL---DF-KTLAKRTPGFVGADLND 378
Query: 600 LVADAGANLIR------KSNSEVDKNEPGESDLTAKV-------AHNDNSSI---AATQV 643
LV+ AG+ I+ KSNS + + G+ DL+ V H + I A +
Sbjct: 379 LVSTAGSTAIKRYLDLLKSNSGEEMDIEGQDDLSPSVKELRRLITHAKETPIGSEAEVVL 438
Query: 644 MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
+ +D A+ + + ++ G +P+ W D+G L ++ + + P+ H +L++S
Sbjct: 439 VSNDDFFTALPKIQP-SSKREGFATIPDTTWADIGALSGIRDELATAIVDPIKHPELYAS 497
Query: 704 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
G+ +GVLL+GPPG GKTLLAKAVA E NF+SVKGPEL+N Y+GESE+ VR +F +
Sbjct: 498 VGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVR 557
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
ARS+ PCVIFFDELD+L P R + RVV+ +L E+DGL S Q +++I A+NR
Sbjct: 558 ARSSIPCVIFFDELDALVPRRDDTLSEASA--RVVNTLLTELDGLGSSRQGIYVIAATNR 615
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
PD+IDPA+LRPGR + LL+V + S + R +L+ L R+ + + L +A++C F+
Sbjct: 616 PDIIDPAMLRPGRLETLLFVNLPSPLE-RVEILQTLVRRLPIEFNEDLRRLAEECE-GFS 673
Query: 883 GADMYALCADAWFHAAKRK 901
GAD+ +L A ++A KR+
Sbjct: 674 GADLTSLLRRAGYNAIKRR 692
Score = 433 (157.5 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 106/300 (35%), Positives = 176/300 (58%)
Query: 609 IRKSNSEVDKNEPGESDLTAKVAHNDNSS---IAATQVMGKEDLVKAMERSKKRNA-SAL 664
+++SNS ++K+ G + +K +++++ A K SK+R A +A+
Sbjct: 96 VQESNS-MNKSLVGAWNTASKAPKSESNAENGTPAPTTTKKRHHGGESHSSKRRKAENAV 154
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF-SSGLRKRSGVLLYGPPGTGKTL 723
+V D+GGL+DV + + D V LP+ ++ +S ++ GVLL+GPPG GKT+
Sbjct: 155 DRSPPTHVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTM 214
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
+A A A E + F+S+ P +++ GESEK +R+ F++A+ PC+IF DE+D++ P R
Sbjct: 215 IANAFAAELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKR 274
Query: 784 GASGDSGGVMDRVVSQMLAEIDGLNDSSQD---LFIIGASNRPDLIDPALLRPGRFDKLL 840
S + R+V+Q+L +D L D + ++ A+NRPD +D AL R GRFDK +
Sbjct: 275 ENSQRE--MEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEI 332
Query: 841 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
+ V S+ RE++L+ALTRK +L++D+ ++AK+ P F GAD+ L + A A KR
Sbjct: 333 NMTVPSE-PVREQILRALTRKMRLVDDLDFKTLAKRTP-GFVGADLNDLVSTAGSTAIKR 390
Score = 62 (26.9 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 922 VEYDDFVKVLRELSPSLSMAELKKYELLRDQFEG 955
+++DDFV + PS++ ++KKY+ LR ++ G
Sbjct: 695 IKFDDFVAAKSFIRPSVT--DMKKYDKLRREWSG 726
Score = 45 (20.9 bits), Expect = 9.6e-38, Sum P(3) = 9.6e-38
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 916 QADSVVVEYDDFVKVLRELSPS 937
+A+ V+V DDF L ++ PS
Sbjct: 433 EAEVVLVSNDDFFTALPKIQPS 454
Score = 43 (20.2 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 134 PPTTRKQVCDGDVHS---KHSSPTMLTFPSIHLPQDDMELLDRQVAYLSPLL 182
P TT+K+ G+ HS + + + P H+ D+ LD V L L+
Sbjct: 130 PTTTKKRHHGGESHSSKRRKAENAVDRSPPTHVSLADLGGLDDVVQQLGDLV 181
Score = 43 (20.2 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 478 PNDQVGLSSEVASVIREFTEPSAED 502
P + GL EV V+R+ + AE+
Sbjct: 7 PTLRQGLDKEVYQVVRKIVDDQAEN 31
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 690 (248.0 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 181/459 (39%), Positives = 261/459 (56%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G + R+E+L ++ +L D
Sbjct: 349 RSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEIL-RIHTKNMKLADDVDL 407
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E I +T GF+ D+ +L ++A IR+ +D E + +V + S+
Sbjct: 408 EA----IASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE---ETIDTEVLN----SL 456
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVK--WEDVGGLEDVKKSILDTVQLPLL 696
TQ ++ A+ S N SAL V NV W+D+GGL+++K + +TV+ P+L
Sbjct: 457 GVTQ----DNFRFALGNS---NPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVL 509
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D + GL GVL +GPPGTGKTLLAKAVATE S NF+SVKGPEL++M+ GESE N
Sbjct: 510 HPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESN 569
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
+RDIF KAR+A P V+F DELDS+A ARG S GD+GG DRVV+Q+L E+DG+N + +++
Sbjct: 570 IRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMN-AKKNV 628
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
F+IGA+NRPD IDPALLRPGR D+L+YV + D R +L+A R L + L IA
Sbjct: 629 FVIGATNRPDQIDPALLRPGRLDQLIYVPL-PDEPARLSILQAQLRNTPLEPGLDLNEIA 687
Query: 875 KKCPPNFTGADM-YALCADAWFHA-----AKRKVLXXXXXXXXXRIDQADSVV--VEYDD 926
K F+GAD+ Y + A F A+ K+ + + D V VE +D
Sbjct: 688 K-ITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEED 746
Query: 927 ---------FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + ++ S+S AEL++YE Q + S
Sbjct: 747 PVPYITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQAS 785
Score = 473 (171.6 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 110/289 (38%), Positives = 166/289 (57%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG + I + V+LPL H LF S G++ G+L+YGPPGTGKT++A+AVA
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT--NG 329
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V RVVSQ+L +DG+ S ++ +I A+NRP+ IDPAL R GRFD+ + +GV D
Sbjct: 330 EVERRVVSQLLTLMDGMKARS-NVVVIAATNRPNSIDPALRRFGRFDREVDIGV-PDAEG 387
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +IA + F GAD+ +LC++A + K+
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETH-GFVGADIASLCSEAAMQQIREKMDLIDLEEE 446
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS-LSMAELKKYELLRDQFEGSSN 958
+ +S+ V D+F L +PS L ++ + D G N
Sbjct: 447 TIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDN 495
Score = 94 (38.1 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 34/150 (22%), Positives = 67/150 (44%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS--GSNDFVPLQGDTVKIL 379
+ FKVV V+P E ++ + T + G + + ++ G +D + +I
Sbjct: 172 VEFKVVEVDPEEIAIVAQD---TIIHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQIR 228
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K +L++G PG GK + R VA G + +M+
Sbjct: 229 ELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSK 288
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ SP+I+ + + D
Sbjct: 289 MAGESESNLRKAFEEAEKNSPSIIFIDEID 318
Score = 41 (19.5 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 22/97 (22%), Positives = 41/97 (42%)
Query: 342 TKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVL 401
T TA++ +AL D + N + + +T+++L T+ K V ++
Sbjct: 23 TATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVKGKKRKDTVLIV 82
Query: 402 L--HGLP-GCGK--RTVVRYVARRLGIHVVEYSCHNL 433
L +P G + R V + RLG V + C ++
Sbjct: 83 LADDDMPDGVARVNRCVRNNLRVRLGDIVTVHPCPDI 119
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 690 (248.0 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 181/459 (39%), Positives = 261/459 (56%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G + R+E+L ++ +L D
Sbjct: 349 RSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEIL-RIHTKNMKLADDVDL 407
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E I +T GF+ D+ +L ++A IR+ +D E + +V + S+
Sbjct: 408 EA----IASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE---ETIDTEVLN----SL 456
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVK--WEDVGGLEDVKKSILDTVQLPLL 696
TQ ++ A+ S N SAL V NV W+D+GGL+++K + +TV+ P+L
Sbjct: 457 GVTQ----DNFRFALGNS---NPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPVL 509
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D + GL GVL +GPPGTGKTLLAKAVATE S NF+SVKGPEL++M+ GESE N
Sbjct: 510 HPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESN 569
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
+RDIF KAR+A P V+F DELDS+A ARG S GD+GG DRVV+Q+L E+DG+N + +++
Sbjct: 570 IRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMN-AKKNV 628
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
F+IGA+NRPD IDPALLRPGR D+L+YV + D R +L+A R L + L IA
Sbjct: 629 FVIGATNRPDQIDPALLRPGRLDQLIYVPL-PDEPARLSILQAQLRNTPLEPGLDLNEIA 687
Query: 875 KKCPPNFTGADM-YALCADAWFHA-----AKRKVLXXXXXXXXXRIDQADSVV--VEYDD 926
K F+GAD+ Y + A F A+ K+ + + D V VE +D
Sbjct: 688 K-ITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEED 746
Query: 927 ---------FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + ++ S+S AEL++YE Q + S
Sbjct: 747 PVPYITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQAS 785
Score = 473 (171.6 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 110/289 (38%), Positives = 166/289 (57%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG + I + V+LPL H LF S G++ G+L+YGPPGTGKT++A+AVA
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F++A P +IF DE+DS+AP R + +G
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT--NG 329
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V RVVSQ+L +DG+ S ++ +I A+NRP+ IDPAL R GRFD+ + +GV D
Sbjct: 330 EVERRVVSQLLTLMDGMKARS-NVVVIAATNRPNSIDPALRRFGRFDREVDIGV-PDAEG 387
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL +DV L +IA + F GAD+ +LC++A + K+
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETH-GFVGADIASLCSEAAMQQIREKMDLIDLEEE 446
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS-LSMAELKKYELLRDQFEGSSN 958
+ +S+ V D+F L +PS L ++ + D G N
Sbjct: 447 TIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDN 495
Score = 94 (38.1 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 34/150 (22%), Positives = 67/150 (44%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLIS--GSNDFVPLQGDTVKIL 379
+ FKVV V+P E ++ + T + G + + ++ G +D + +I
Sbjct: 172 VEFKVVEVDPEEIAIVAQD---TIIHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQIR 228
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K +L++G PG GK + R VA G + +M+
Sbjct: 229 ELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSK 288
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF A+ SP+I+ + + D
Sbjct: 289 MAGESESNLRKAFEEAEKNSPSIIFIDEID 318
Score = 41 (19.5 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 22/97 (22%), Positives = 41/97 (42%)
Query: 342 TKTALVLGGSIPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVL 401
T TA++ +AL D + N + + +T+++L T+ K V ++
Sbjct: 23 TATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVKGKKRKDTVLIV 82
Query: 402 L--HGLP-GCGK--RTVVRYVARRLGIHVVEYSCHNL 433
L +P G + R V + RLG V + C ++
Sbjct: 83 LADDDMPDGVARVNRCVRNNLRVRLGDIVTVHPCPDI 119
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 731 (262.4 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 179/450 (39%), Positives = 261/450 (58%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + P +RR F E+ +G R+E+L Q+ +L D
Sbjct: 70 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL-QIHTKNMKLADDVDL 128
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
E+ + +T G + DL AL ++A IRK +D + + A+V + S+
Sbjct: 129 EQ----VGNETHGHVGADLAALCSEAALQAIRKKMDLIDLED---ETIDAEVMN----SL 177
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAP--KVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
A T +D A+ +S N SAL +VP V WED+GGLEDVK+ + + VQ P+
Sbjct: 178 AVTM----DDFRWALSQS---NPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 230
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
H D F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE N
Sbjct: 231 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 290
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDL 814
VR+IF KAR A PCV+FFDELDS+A ARG + GD GG DRV++Q+L E+DG++ + +++
Sbjct: 291 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNV 349
Query: 815 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIA 874
FIIGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R +LKA RK + +DV L +A
Sbjct: 350 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKS-RVAILKANLRKSPVAKDVDLDFLA 408
Query: 875 KKCPPNFTGADMYALCADAWFHAAK-------RKVLXXXXXXXXXRIDQADSVV-VEYDD 926
K F+GAD+ +C A A + R+ +++ D V + D
Sbjct: 409 KMTN-GFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 467
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + +R S+S +++KYE+ + S
Sbjct: 468 FEEAMRFARRSVSDNDIRKYEMFAQTLQQS 497
Score = 312 (114.9 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 72/197 (36%), Positives = 114/197 (57%)
Query: 741 GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQM 800
GPE+++ GESE N+R F++A P +IF DELD++AP R + G V R+VSQ+
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT--HGEVERRIVSQL 60
Query: 801 LAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR 860
L +DGL + + ++ A+NRP+ IDPAL R GRFD+ + +G+ D + R +L+ T+
Sbjct: 61 LTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEILQIHTK 118
Query: 861 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSV 920
KL +DV L + + + GAD+ ALC++A A ++K+ + +S+
Sbjct: 119 NMKLADDVDLEQVGNETHGH-VGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSL 177
Query: 921 VVEYDDFVKVLRELSPS 937
V DDF L + +PS
Sbjct: 178 AVTMDDFRWALSQSNPS 194
Score = 45 (20.9 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 428 YSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
+S +M+ ++ + L +AF A+ +P I+ + + D
Sbjct: 1 FSGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD 39
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 684 (245.8 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 154/377 (40%), Positives = 229/377 (60%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + +RR F EI +G R+E+L + G
Sbjct: 343 RAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR-----IHTKNMKLGE 397
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
+ ++ + + GF+ DL +L ++A IR+ +D + + A+V + S+
Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLED---DTIDAEVLN----SL 450
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHK 698
A T E+ AM +S +A + PN W D+GGL++VK+ + + VQ P+ H
Sbjct: 451 AVTM----ENFRFAMGKSSP-SALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHP 505
Query: 699 DLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 757
+ + G++ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE NVR
Sbjct: 506 EKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 565
Query: 758 DIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDLFI 816
D+F KAR+A PCV+FFDELDS+A ARG S GD+GG DRV++Q+L E+DG+N + +++FI
Sbjct: 566 DVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMN-AKKNVFI 624
Query: 817 IGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKK 876
IGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R ++ KA RK L D+ L +AK
Sbjct: 625 IGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RLQIFKASLRKTPLSADLDLNFLAKN 683
Query: 877 CPPNFTGADMYALCADA 893
F+GAD+ +C A
Sbjct: 684 TV-GFSGADLTEICQRA 699
Score = 448 (162.8 bits), Expect = 4.9e-39, P = 4.9e-39
Identities = 100/267 (37%), Positives = 155/267 (58%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG+ I + V+LPL H LF + G++ G+LL+GPPGTGKTL+A+AVA
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F + P ++F DE+D++AP R + G
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKA--HG 323
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + +I A+NRP+ ID AL R GRFD+ + +G+ V
Sbjct: 324 EVEKRIVSQLLTLMDGLKTRAH-VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG- 381
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL EDV L +A +C F GAD+ +LC++A + K+
Sbjct: 382 RLEILRIHTKNMKLGEDVDLEQVANECH-GFVGADLASLCSEAAIQQIREKMELIDLEDD 440
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V ++F + + SPS
Sbjct: 441 TIDAEVLNSLAVTMENFRFAMGKSSPS 467
Score = 87 (35.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +P+ ++ + T + G I + L G +D ++ +I
Sbjct: 166 VEFKVVETDPAPACIVAPD---TVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIK 222
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K +LL G PG GK + R VA G + +M+
Sbjct: 223 EMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 282
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF + SP IL + + D
Sbjct: 283 MSGESESNLRKAFAECEKNSPAILFIDEID 312
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 684 (245.8 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 154/377 (40%), Positives = 229/377 (60%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
R V+++AA + + +RR F EI +G R+E+L + G
Sbjct: 343 RAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR-----IHTKNMKLGE 397
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
+ ++ + + GF+ DL +L ++A IR+ +D + + A+V + S+
Sbjct: 398 DVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLED---DTIDAEVLN----SL 450
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHK 698
A T E+ AM +S +A + PN W D+GGL++VK+ + + VQ P+ H
Sbjct: 451 AVTM----ENFRFAMGKSSP-SALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHP 505
Query: 699 DLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 757
+ + G++ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE NVR
Sbjct: 506 EKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 565
Query: 758 DIFQKARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLNDSSQDLFI 816
D+F KAR+A PCV+FFDELDS+A ARG S GD+GG DRV++Q+L E+DG+N + +++FI
Sbjct: 566 DVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMN-AKKNVFI 624
Query: 817 IGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKK 876
IGA+NRPD+IDPA+LRPGR D+L+Y+ + + S R ++ KA RK L D+ L +AK
Sbjct: 625 IGATNRPDIIDPAVLRPGRLDQLIYIPLPDEAS-RLQIFKASLRKTPLSADLDLNFLAKN 683
Query: 877 CPPNFTGADMYALCADA 893
F+GAD+ +C A
Sbjct: 684 TV-GFSGADLTEICQRA 699
Score = 448 (162.8 bits), Expect = 4.9e-39, P = 4.9e-39
Identities = 100/267 (37%), Positives = 155/267 (58%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++D+GG+ I + V+LPL H LF + G++ G+LL+GPPGTGKTL+A+AVA
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E F + GPE+++ GESE N+R F + P ++F DE+D++AP R + G
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKA--HG 323
Query: 791 GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
V R+VSQ+L +DGL + + +I A+NRP+ ID AL R GRFD+ + +G+ V
Sbjct: 324 EVEKRIVSQLLTLMDGLKTRAH-VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG- 381
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXX 910
R +L+ T+ KL EDV L +A +C F GAD+ +LC++A + K+
Sbjct: 382 RLEILRIHTKNMKLGEDVDLEQVANECH-GFVGADLASLCSEAAIQQIREKMELIDLEDD 440
Query: 911 XXRIDQADSVVVEYDDFVKVLRELSPS 937
+ +S+ V ++F + + SPS
Sbjct: 441 TIDAEVLNSLAVTMENFRFAMGKSSPS 467
Score = 87 (35.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 322 IYFKVVAVEPSEETVLRVNCTKTALVLGGS-IPSALPPDLLIS-GSNDFVPLQGDTVKIL 379
+ FKVV +P+ ++ + T + G I + L G +D ++ +I
Sbjct: 166 VEFKVVETDPAPACIVAPD---TVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIK 222
Query: 380 ASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMAS 436
+ P P + + +K +LL G PG GK + R VA G + +M+
Sbjct: 223 EMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 282
Query: 437 SERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++ + L +AF + SP IL + + D
Sbjct: 283 MSGESESNLRKAFAECEKNSPAILFIDEID 312
>WB|WBGene00004195 [details] [associations]
symbol:prx-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0002119 GO:GO:0040015 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00550000074953 EMBL:AB010968
EMBL:AB012224 EMBL:FO080622 PIR:T37276 RefSeq:NP_504268.1
UniGene:Cel.19362 ProteinModelPortal:G5EFR8 SMR:G5EFR8
EnsemblMetazoa:F39G3.7 GeneID:266912 KEGG:cel:CELE_F39G3.7
CTD:266912 WormBase:F39G3.7 OMA:AVATEFK NextBio:953402
Uniprot:G5EFR8
Length = 720
Score = 685 (246.2 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 130/248 (52%), Positives = 188/248 (75%)
Query: 647 EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLR 706
EDL+ ++ A A+GAPK+PNV+WEDVGGLE+ K+++L++++ +LF S
Sbjct: 440 EDLI---DKRNSNFADAIGAPKIPNVRWEDVGGLEETKQTVLESIRT-----NLFGSRAL 491
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
KRSG++LYG PG GKTL+AKAVATE + FLSVKGPEL+N Y+G+SE+N+R +F++A+ A
Sbjct: 492 KRSGIILYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQA 551
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS-QDLFIIGASNRPDL 825
PCVIFFDE+DSLAP RG +GDSGGV+DR+VSQ+LAE+D L++S +F++GA+NRPDL
Sbjct: 552 SPCVIFFDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDL 611
Query: 826 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGAD 885
+D +L+ PGRFDKL+ V DV + ++L+A++RK + EDV L IA K +GA
Sbjct: 612 LDNSLMTPGRFDKLVEVKPGEDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQ 671
Query: 886 MYALCADA 893
++++ ++A
Sbjct: 672 LFSIISNA 679
Score = 48 (22.0 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQS 454
K + +L+ G G GKR + R A + E + ++ + + A + A+
Sbjct: 256 KKALVLLVTGASGSGKRLMSRVFASETHRNFFEVDGYEMVCENASTSEAKWTSWWEKAKL 315
Query: 455 YSPTILLLRDFDV 467
+L +R+ +V
Sbjct: 316 LQNCVLFIRNSNV 328
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 641 (230.7 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 169/445 (37%), Positives = 249/445 (55%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
QVL++ A + + L P +RR F EI +G E R+++L L + + L D +
Sbjct: 365 QVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGARMKILKTLCRKI-RLPDDF---D 420
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEV---DKNEPGES-----DLTAKVAH 632
F + + T G++ DL AL +A N + + E D+ P + DL
Sbjct: 421 F-RHLARLTPGYVGADLMALCREAAMNAVNRILLEPTTEDQITPTLALARLLDLLKSSVS 479
Query: 633 NDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQ 692
+AA V+ D ++ R + +A G VP+V W DVG L+DV++ + +
Sbjct: 480 LSEDQLAALCVL-MSDFSSSLVRVQP-SAKREGFATVPDVTWADVGALQDVREELHMAIM 537
Query: 693 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 751
P+ + + F + GL +G+LL GPPG GKTLLAKAVA LNF+SVKGPEL+NMY+GE
Sbjct: 538 APIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGE 597
Query: 752 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS 811
SE+ VR +FQ+ R++ PCVIFFDE+D+L P R + +SG + RVV+Q+L E+DG+ +
Sbjct: 598 SERAVRQVFQRGRNSAPCVIFFDEIDALCPRR-SEHESGASV-RVVNQLLTEMDGMENRR 655
Query: 812 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDV 868
Q +FI+ A+NRPD+IDPA+LRPGR DK LYVG+ + R +L +T+ K +L DV
Sbjct: 656 Q-VFIMAATNRPDIIDPAVLRPGRLDKTLYVGL-PPAADRHAILNTITKGGTKPQLDSDV 713
Query: 869 SLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDD 926
SL IA +C FTGAD+ AL +A +A L + A + V
Sbjct: 714 SLEEIAHDARCE-TFTGADLSALVREACVNA-----LRVHLDPAQTHTESAKDIRVSRVH 767
Query: 927 FVKVLRELSPSLSMAELKKYELLRD 951
F +++ PS+S + YE LR+
Sbjct: 768 FEDAFKKVRPSVSKKDQLMYERLRE 792
Score = 433 (157.5 bits), Expect = 2.1e-37, P = 2.1e-37
Identities = 92/236 (38%), Positives = 149/236 (63%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
+VK+ED GG ++ + + + + + H +++ G+ G LL+GPPG GKTLLA+AVA
Sbjct: 223 SVKFEDFGGSDETLEEVCKLL-IHMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVA 281
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
E +L L + PEL++ GESE+ +R++F++A S+ PC++F DE+D++ P R + S
Sbjct: 282 GETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDAITPKRETA--S 339
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQ--DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSD 847
+ R+V+Q+L +D LN + + +IGA+NRPD +DPAL R GRFD+ + +G+ D
Sbjct: 340 KDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGI-PD 398
Query: 848 VSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 903
R ++LK L RK +L +D +A+ P + GAD+ ALC +A +A R +L
Sbjct: 399 EGARMKILKTLCRKIRLPDDFDFRHLAR-LTPGYVGADLMALCREAAMNAVNRILL 453
Score = 96 (38.9 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTIL 460
LLHG PGCGK + + VA + +++ S L++ ++ L + F A S +P IL
Sbjct: 264 LLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCIL 323
Query: 461 LLRDFD 466
+ + D
Sbjct: 324 FIDEID 329
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 648 (233.2 bits), Expect = 5.4e-70, Sum P(2) = 5.4e-70
Identities = 177/522 (33%), Positives = 275/522 (52%)
Query: 461 LLRDFDVFRNLVSNESL--PNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEK 518
LL D L SN S PN+Q + I E + ++ K K
Sbjct: 340 LLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFK 399
Query: 519 ICRQQVLLVAAADSSEGLPPTIR--RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
+ V+++ A + E L +R F EI +G + R ++L + + L ++
Sbjct: 400 --KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKM-RLENNF 456
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKS-NSEVDKNEPGESDLTAKVAHNDN 635
EE I T G++ D++ LV +A N + + S ++ S ++ + +N
Sbjct: 457 DYEE----IATLTPGYVGADINLLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINN 512
Query: 636 SSIAATQVMGKEDL---------VKAMERSK--KRNASAL---GAPKVPNVKWEDVGGLE 681
++ ++ KE L ++ ++ K K+ A G +PNV W+DVG L
Sbjct: 513 IGLSTELLISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALS 572
Query: 682 DVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 740
V++ + +++ P+ + + + G+ +GVL+YGPPG GKTLLAKA+A+EC NF+SVK
Sbjct: 573 GVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVK 632
Query: 741 GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVS 798
GPEL+N Y+GESE+ VR +FQ+A ++ PCVIFFDE D+LAP RG GD GG +RVV+
Sbjct: 633 GPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGG-GDGGGNQATERVVN 691
Query: 799 QMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKAL 858
Q+L E+DGL S+ +FII A+NRPD+ID A+ RPGR DK++YV + S R +LK L
Sbjct: 692 QLLTEMDGLEKRSE-VFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEE-RCEILKTL 749
Query: 859 TRKFKLLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQ 916
T K + +DV L + +C +F+GAD+ L +A HA R +
Sbjct: 750 THKIPIHQDVDLIKVGTDLRCH-SFSGADLSLLVKEAANHAISR--------GFDNNSTE 800
Query: 917 ADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSSN 958
D+V +E DF+ L ++ PS+S +K EL+ D+ N
Sbjct: 801 PDTVTME--DFIFALSKIKPSVS----RKDELMYDKLNNDIN 836
Score = 272 (100.8 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 56/157 (35%), Positives = 95/157 (60%)
Query: 669 VPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKA 727
+P + + ++GG+E + I + ++ P+ H +++S G+ G+LL+GP G GKTLLAKA
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 728 VATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASG 787
+A E + ++ E+ + GESE VR +F A + PC+IF DE+D++AP R ++
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESA- 328
Query: 788 DSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPD 824
S + R+VSQ+L +D LN S + ++N P+
Sbjct: 329 -SKDMERRIVSQLLTCMDSLNYLSSN----NSTNEPN 360
Score = 84 (34.6 bits), Expect = 5.4e-70, Sum P(2) = 5.4e-70
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LLHG GCGK + + +A L + + S + + ++ A + F+ A + +P I
Sbjct: 253 ILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCI 312
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 313 IFIDEID 319
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 577 (208.2 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 136/328 (41%), Positives = 201/328 (61%)
Query: 634 DNSSIAATQVMGK----EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILD 689
D ++ Q+ G D + A+ S + +A G VPNV W D+G LED+++ +
Sbjct: 420 DQDPLSEEQMQGLCIELNDFIVALS-SVQPSAKREGFVTVPNVTWADIGALEDIREELTM 478
Query: 690 TVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 748
+ P+ + D F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY
Sbjct: 479 AILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 538
Query: 749 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN 808
+GESE+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL
Sbjct: 539 VGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL- 595
Query: 809 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLL 865
++ Q +FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L
Sbjct: 596 EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLD 654
Query: 866 EDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVE 923
DV+L +IA +C +TGAD+ AL +A A ++++ ++ + V
Sbjct: 655 ADVNLEAIAGDLRCDC-YTGADLSALVREASICALRQEMARQKSG------NEKGELKVS 707
Query: 924 YDDFVKVLRELSPSLSMAELKKYELLRD 951
+ F + +++ S+S + YE L++
Sbjct: 708 HKHFEEAFKKVRSSISKKDQIMYERLQE 735
Score = 449 (163.1 bits), Expect = 2.5e-39, P = 2.5e-39
Identities = 104/265 (39%), Positives = 162/265 (61%)
Query: 646 KEDLVKA---MERSKKRNASALGAP-KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF 701
KEDL + +E ++ A A G ++ NVK+EDVGG + K + + + + H +++
Sbjct: 115 KEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVY 173
Query: 702 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 760
G+ GVLL+GPPG GKTLLA A+A E L L V PE+++ GESE+ +R++F
Sbjct: 174 HHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELF 233
Query: 761 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQDLFIIG 818
++A S PC+IF DE+D++ P R + S + R+V+Q+L +D LN+ ++ + +IG
Sbjct: 234 EQAVSNAPCIIFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATARVLVIG 291
Query: 819 ASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP 878
A+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L + +A
Sbjct: 292 ATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCHLAH-LT 349
Query: 879 PNFTGADMYALCADAWFHAAKRKVL 903
P F GAD+ ALC +A A R ++
Sbjct: 350 PGFVGADLMALCREAAMCAVNRVLM 374
Score = 98 (39.6 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L + F A S +P I
Sbjct: 184 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCI 243
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 244 IFIDEID 250
Score = 80 (33.2 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L + +
Sbjct: 286 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPQ---AFD 341
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAK 629
F + T GF+ DL AL +A N + E K P DL +K
Sbjct: 342 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSK 392
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 588 (212.0 bits), Expect = 8.7e-65, Sum P(3) = 8.7e-65
Identities = 131/307 (42%), Positives = 186/307 (60%)
Query: 648 DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLR 706
D +K M+ S KR G VP+ W+D+G LE +++ + V P+ + ++ GL
Sbjct: 639 DAIKVMQPSAKRE----GFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLT 694
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
SGVLL GPPG GKTLLAKA+A E +NF+SVKGPEL+NMY+GESE+ VR FQ+AR++
Sbjct: 695 APSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNS 754
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
PCVIFFDE DSL P R GD R+V+Q+L E+DG+ + + ++I+ A+NRPD+I
Sbjct: 755 APCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEER-KGVYILAATNRPDII 813
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFK---LLEDVSLYSIAKKCPPNFTG 883
DPA+LRPGR D +LYVG + S R +LKA T+ K L +DV L IA + +TG
Sbjct: 814 DPAILRPGRLDTILYVGF-PEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTE-GYTG 871
Query: 884 ADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
AD+ L A + ++ + D + V F + L++L PS++ +
Sbjct: 872 ADLAGLVKQASMFSLRQSLNNGDT--------NLDDLCVRSQHFQEALQQLRPSVNEQDR 923
Query: 944 KKYELLR 950
K Y+ LR
Sbjct: 924 KIYDKLR 930
Score = 335 (123.0 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 79/235 (33%), Positives = 130/235 (55%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 729
P + D+GG++ K + + + + F GL G+LL+GPPG GKT LA+A++
Sbjct: 246 PTESFRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAIS 305
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG-ASGD 788
+ + + + ELI GESE+ +R++F +A PCV+F DE+D++ R AS D
Sbjct: 306 GQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKD 365
Query: 789 SGGVMDRVVSQMLAEIDGL--NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
+ R+VSQ+++ +D L N+ Q + +I A+ RPD++DP L R GRFD + + + S
Sbjct: 366 ---MERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPS 422
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
RE +L+ + ++ IA+ P + GAD+ AL + A A KR+
Sbjct: 423 RKERRE-ILRIQCEGLSVDPKLNYDKIAE-LTPGYVGADLMALVSRAASVAVKRR 475
Score = 105 (42.0 bits), Expect = 8.7e-65, Sum P(3) = 8.7e-65
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 375 TVKILASILAPTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431
T+K L +L P L L +LLHG PGCGK + R ++ +L + ++E
Sbjct: 259 TLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPAT 318
Query: 432 NLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
L+ ++ + + F+ A YSP +L + + D
Sbjct: 319 ELIGGISGESEERIREVFDQAIGYSPCVLFIDEID 353
Score = 76 (31.8 bits), Expect = 8.7e-65, Sum P(3) = 8.7e-65
Identities = 32/121 (26%), Positives = 61/121 (50%)
Query: 522 QQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSE 579
Q V+++AA + L P +RR F HEI++ + ++R E+L +Q L+ D
Sbjct: 388 QSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILR--IQ-CEGLSVDP--- 441
Query: 580 EFVKDIIGQ-TSGFMPRDLHALVADAGANLIRKSNSEV--DKNEPGESDLTAKVAHNDNS 636
+ D I + T G++ DL ALV+ A + +++ + + + + E ++T +D
Sbjct: 442 KLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEP 501
Query: 637 S 637
S
Sbjct: 502 S 502
Score = 54 (24.1 bits), Expect = 1.7e-62, Sum P(3) = 1.7e-62
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 611 KSNSEVDKNEPGESDL-TAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPK 668
K S DK+E ++ T K A N NSSI + Q K+ K + + + A PK
Sbjct: 532 KETSAKDKSEGDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPK 590
Score = 44 (20.5 bits), Expect = 4.2e-56, Sum P(3) = 4.2e-56
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 568 PVSELTSD-TG-SEEFVKDIIGQTSGFMPRDLHALVADA-GAN 607
P +EL +G SEE ++++ Q G+ P L DA G N
Sbjct: 316 PATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGN 358
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 577 (208.2 bits), Expect = 1.4e-64, Sum P(4) = 1.4e-64
Identities = 136/328 (41%), Positives = 201/328 (61%)
Query: 634 DNSSIAATQVMGK----EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILD 689
D ++ Q+ G D + A+ S + +A G VPNV W D+G LED+++ +
Sbjct: 537 DQDPLSEEQMQGLCIELNDFIVALS-SVQPSAKREGFVTVPNVTWADIGALEDIREELTM 595
Query: 690 TVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 748
+ P+ + D F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY
Sbjct: 596 AILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 655
Query: 749 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN 808
+GESE+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL
Sbjct: 656 VGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL- 712
Query: 809 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLL 865
++ Q +FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L
Sbjct: 713 EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLD 771
Query: 866 EDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVE 923
DV+L +IA +C +TGAD+ AL +A A ++++ ++ + V
Sbjct: 772 ADVNLEAIAGDLRCDC-YTGADLSALVREASICALRQEMARQKSG------NEKGELKVS 824
Query: 924 YDDFVKVLRELSPSLSMAELKKYELLRD 951
+ F + +++ S+S + YE L++
Sbjct: 825 HKHFEEAFKKVRSSISKKDQIMYERLQE 852
Score = 449 (163.1 bits), Expect = 7.1e-38, Sum P(2) = 7.1e-38
Identities = 104/265 (39%), Positives = 162/265 (61%)
Query: 646 KEDLVKA---MERSKKRNASALGAP-KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF 701
KEDL + +E ++ A A G ++ NVK+EDVGG + K + + + + H +++
Sbjct: 232 KEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVY 290
Query: 702 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 760
G+ GVLL+GPPG GKTLLA A+A E L L V PE+++ GESE+ +R++F
Sbjct: 291 HHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELF 350
Query: 761 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQDLFIIG 818
++A S PC+IF DE+D++ P R + S + R+V+Q+L +D LN+ ++ + +IG
Sbjct: 351 EQAVSNAPCIIFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATARVLVIG 408
Query: 819 ASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP 878
A+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L + +A
Sbjct: 409 ATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCHLAH-LT 466
Query: 879 PNFTGADMYALCADAWFHAAKRKVL 903
P F GAD+ ALC +A A R ++
Sbjct: 467 PGFVGADLMALCREAAMCAVNRVLM 491
Score = 98 (39.6 bits), Expect = 1.4e-64, Sum P(4) = 1.4e-64
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L + F A S +P I
Sbjct: 301 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCI 360
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 361 IFIDEID 367
Score = 80 (33.2 bits), Expect = 1.4e-64, Sum P(4) = 1.4e-64
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L + +
Sbjct: 403 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPQ---AFD 458
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAK 629
F + T GF+ DL AL +A N + E K P DL +K
Sbjct: 459 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSK 509
Score = 37 (18.1 bits), Expect = 1.4e-64, Sum P(4) = 1.4e-64
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQ 271
P+ A+H+ S + + G +S+ S+ E E R+
Sbjct: 113 PQSANHMNSSLLSLYRKGNPDSV--SNTPEMEQRE 145
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 658 (236.7 bits), Expect = 1.9e-64, P = 1.9e-64
Identities = 184/630 (29%), Positives = 319/630 (50%)
Query: 343 KTALVLGGSIPSALPPDLLISGSN-----DFVPLQGDTVKILASILAPTLCPSV---LSL 394
K +L L G+ + DL + G+ DF ++ ++ ++L P L P + +
Sbjct: 208 KVSLSLSGATGNG---DLEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGV 264
Query: 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQS 454
K +L HG PGCGK + +A G+ + S +++ + + + F+ A
Sbjct: 265 KPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYR 324
Query: 455 YSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVK 514
+P+I+ + + D + N+ ++ + +++ + + ++ + S G+
Sbjct: 325 TAPSIVFIDEIDAIGSKRENQQREMEK-RIVTQLLTCMDGPGNKGDKNAPDSSAGF---- 379
Query: 515 EIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSEL 572
VL++ A + + L P +RR F EI++ E R E+LS + Q +L
Sbjct: 380 ---------VLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQ---KL 427
Query: 573 TSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRK--SNSEVDKNEPGESDLT-AK 629
+ ++ K I T GF+ DL ++ AG I++ + + +++ GE D + +
Sbjct: 428 RLEGPFDK--KRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWLR 485
Query: 630 VAHNDNSSIAATQVMGK-EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSIL 688
+ + M E+ V ++ S R ++ VP+VKW+DVGGL+ ++
Sbjct: 486 MPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSI----VPDVKWDDVGGLDHLRLQFN 541
Query: 689 DTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 747
+ P+ D++ + G+ +G LLYGPPG GKTL+AKA A E NF+ +KG EL+N
Sbjct: 542 RYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNK 601
Query: 748 YIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 807
Y+GESE +R +FQ+AR+ PCVIFFDE+D+L +RG G V++R+++Q L E+DG
Sbjct: 602 YVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEG--AWVVERLLNQFLVELDG- 658
Query: 808 NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV-NSDVSYRERVLKALTRKFKLLE 866
+++++IGA+NRPD++DPA LRPGRF LLYV + N+D R +LKA+ RK +
Sbjct: 659 -GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADE--RASILKAIARKKPIDP 715
Query: 867 DVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDD 926
V L IAK F+GAD+ L A F A + + + ++
Sbjct: 716 SVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMI--GSSESSEDDVTDITQCTIKTRH 773
Query: 927 FVKVLRELSPSLSMAELKKYELLRDQFEGS 956
F + L +SPS++ + + Y+ L + + S
Sbjct: 774 FEQALSLVSPSVNKQQRRHYDALSTKLQES 803
Score = 351 (128.6 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 105/344 (30%), Positives = 161/344 (46%)
Query: 570 SELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDK--NEPGESDLT 627
S + D+G +D + PR L+ D+ + K NS K P E ++
Sbjct: 129 SSSSEDSGDVSTSEDAVYGEKLSPPR--FDLINDSLRDNYAKLNSSSKKPIGSPAEKNVE 186
Query: 628 AKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASA-LGAPKVPNVKWEDVGGLEDVKKS 686
+ N S AT KE V N + K P K D GG++ +
Sbjct: 187 VETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFK--DFGGIKKILDE 244
Query: 687 ILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 745
+ V P+L+ + F G++ SG+L +GPPG GKT LA A+A E + F + E+I
Sbjct: 245 LEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVI 304
Query: 746 NMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEID 805
+ G SE+N+R++F KA P ++F DE+D++ R + R+V+Q+L +D
Sbjct: 305 SGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKR--ENQQREMEKRIVTQLLTCMD 362
Query: 806 GLN--------DSSQD-LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 856
G DSS + +IGA+NRPD +DPAL R GRF+ + + D R +L
Sbjct: 363 GPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTA-PDEDARAEILS 421
Query: 857 ALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
+ +K +L IA+ P F GAD+ ++ A A KR
Sbjct: 422 VVAQKLRLEGPFDKKRIAR-LTPGFVGADLESVAYLAGRKAIKR 464
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 571 (206.1 bits), Expect = 2.4e-64, Sum P(4) = 2.4e-64
Identities = 133/309 (43%), Positives = 190/309 (61%)
Query: 648 DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLR 706
D + A+ S + +A G VPNV W D+G LED+++ + + L + D F GL
Sbjct: 554 DFIVALS-SVQPSAKREGFATVPNVTWADIGALEDIREELTMAILFLLCNPDQFRVLGLV 612
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
+GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GESE+ VR +FQ+A+++
Sbjct: 613 TPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNS 672
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
PCVIFFDE+D+L P R A V RVV+Q+L E+DGL ++ Q +FI+ A+NRPD+I
Sbjct: 673 APCVIFFDEVDALCPRRSARETGASV--RVVNQLLTEMDGL-ETRQQVFIMAATNRPDII 729
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVSLYSIAK--KCPPNF 881
DPA+LRPGR DK L+VG+ R +LK +T+ K L DV+L +IA +C +
Sbjct: 730 DPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLDADVNLEAIAGDLRCDC-Y 787
Query: 882 TGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMA 941
TGAD+ AL +A A K+++ + + + F + +++ S+S
Sbjct: 788 TGADLSALVREASICALKQEMARQKSGS------EKGELKISQKHFEEAFKKVKSSISKE 841
Query: 942 ELKKYELLR 950
+ YE L+
Sbjct: 842 DRAMYEALQ 850
Score = 440 (159.9 bits), Expect = 2.0e-37, Sum P(3) = 2.0e-37
Identities = 102/265 (38%), Positives = 162/265 (61%)
Query: 646 KEDLVKA---MERSKKRNASALGAP-KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF 701
KEDL + +E ++ A A G ++ +VK+EDVGG + K + + + + H +++
Sbjct: 231 KEDLQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGNDTTLKEVCKML-VHMRHPEVY 289
Query: 702 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 760
G+ GVLL+GPPG GKTLLA A+A E L L V E+++ GESE+ +R++F
Sbjct: 290 HHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELF 349
Query: 761 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQDLFIIG 818
++A S+ PC++F DE+D++ P R + S + R+V+Q+L +D LN+ ++ + +IG
Sbjct: 350 EQAVSSAPCILFIDEIDAITPKREIA--SKDMERRIVAQLLTCMDDLNNVAATARVLVIG 407
Query: 819 ASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP 878
A+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L E +A
Sbjct: 408 ATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPETFHFRHLAH-LT 465
Query: 879 PNFTGADMYALCADAWFHAAKRKVL 903
P F GAD+ ALC +A A R ++
Sbjct: 466 PGFVGADLMALCREAAMCAVNRVLM 490
Score = 101 (40.6 bits), Expect = 2.4e-64, Sum P(4) = 2.4e-64
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 364 GSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI 423
G ND L+ + K+L + P + + + R VLLHG PGCGK + +A L +
Sbjct: 267 GGND-TTLK-EVCKMLVHMRHPEVYHHLGVIPPR-GVLLHGPPGCGKTLLAHAIAGELDL 323
Query: 424 HVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
+++ + +++ ++ L + F A S +P IL + + D
Sbjct: 324 PILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEID 366
Score = 76 (31.8 bits), Expect = 2.4e-64, Sum P(4) = 2.4e-64
Identities = 32/136 (23%), Positives = 56/136 (41%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L E
Sbjct: 402 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLP-----ET 455
Query: 581 F-VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIA 639
F + + T GF+ DL AL +A + + E+ ++ A + D
Sbjct: 456 FHFRHLAHLTPGFVGADLMALCREAAMCAVNRVLMELQGQHKKNPEIEASPSEGDQEERT 515
Query: 640 ATQVMGK--EDLVKAM 653
+ K E+L + +
Sbjct: 516 GAEPTSKTQEELQRLL 531
Score = 44 (20.5 bits), Expect = 2.4e-64, Sum P(4) = 2.4e-64
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAED 269
P+ A+H+ S + + G L+S+ + +E ++
Sbjct: 112 PQSANHMNSSLLSLYRKGNLDSVSSTPEMEQKE 144
Score = 41 (19.5 bits), Expect = 6.9e-57, Sum P(3) = 6.9e-57
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 136 TTRKQVCDGDVHSKH 150
TT K+VC VH +H
Sbjct: 271 TTLKEVCKMLVHMRH 285
Score = 41 (19.5 bits), Expect = 2.0e-37, Sum P(3) = 2.0e-37
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 915 DQADSVVVEYDDFVKVLRELSPS 937
+Q + +E +DF+ L + PS
Sbjct: 543 EQLKGLCIELNDFIVALSSVQPS 565
Score = 40 (19.1 bits), Expect = 6.2e-64, Sum P(4) = 6.2e-64
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 165 QDDMELLDRQV-AYLSPLL-AFNLDLHISSLKF 195
++D++ +D ++ A L A L+L ISS+KF
Sbjct: 231 KEDLQEVDGEIEAVLQKRAKAKGLELQISSVKF 263
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 561 (202.5 bits), Expect = 5.5e-64, Sum P(4) = 5.5e-64
Identities = 130/320 (40%), Positives = 186/320 (58%)
Query: 647 EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GL 705
ED +KA+ + A G VP+V W +VG L+ V+ + + P+ +L+ G+
Sbjct: 506 EDFLKALPTIQP-TAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGI 564
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
GVLL+GPPG GKTLLAKAVA E NF+S+KGPEL+N Y+GESE+++R +F +AR+
Sbjct: 565 SAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARA 624
Query: 766 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDL 825
+ PCVIFFDELD+L P R S RVV+ +L E+DGLND + +F+IGA+NRPD+
Sbjct: 625 SVPCVIFFDELDALVPRRDTSLSESS--SRVVNTLLTELDGLNDR-RGIFVIGATNRPDM 681
Query: 826 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKF--KLLEDVSLYSIAK--KCPPNF 881
IDPA+LRPGR DK L++ + + + ++K LT+ L DV I + KC NF
Sbjct: 682 IDPAMLRPGRLDKSLFIEL-PNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCN-NF 739
Query: 882 TGADMYALCADAWFHAAKRKVLXXXXXXXXXRID------------QADSVVVEYDDFVK 929
+GAD+ AL ++ A KRK D + ++V DF
Sbjct: 740 SGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRS 799
Query: 930 VLRELSPSLSMAELKKYELL 949
LR++ PS+S + KY+ L
Sbjct: 800 ALRKIKPSVSDKDRLKYDRL 819
Score = 452 (164.2 bits), Expect = 8.1e-39, Sum P(3) = 8.1e-39
Identities = 108/297 (36%), Positives = 171/297 (57%)
Query: 615 EVDKNEPGES-DLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKV---- 669
E D NE + T + + + SI T E++ K+ +RSK+ + K+
Sbjct: 139 ERDTNEMNKRITSTWSKSGSVSESITETDDPKTEEVKKSKKRSKEGTCK-VKRQKIKEDR 197
Query: 670 --PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF-SSGLRKRSGVLLYGPPGTGKTLLAK 726
PN + +GG++DV +++ + LP+LH ++F S+G+ GVLL+GPPG GKT +A
Sbjct: 198 SPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIAN 257
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A+A E + F+S+ P +++ GESEK +RD+F +ARS PC++FFDE+D++ P R
Sbjct: 258 ALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDG- 316
Query: 787 GDSGGVMDRVVSQMLAEIDGLN---DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVG 843
G + R+V+Q+L +D L + + + IIGA+NRPD +D AL R GRFD+ + +
Sbjct: 317 GAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLN 376
Query: 844 VNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
V ++VS R +LK ++ K+ + +AK P F GAD+ AL A A KR
Sbjct: 377 VPNEVS-RLHILKKMSDNLKIDGAIDFAKLAK-LTPGFVGADLKALVTAAGTCAIKR 431
Score = 100 (40.3 bits), Expect = 5.5e-64, Sum P(4) = 5.5e-64
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 374 DTVKILASILA-PTLCPSV-LSLKFRV--AVLLHGLPGCGKRTVVRYVARRLGIHVVEYS 429
D V L ++ P L P + LS VLLHG PGCGK ++ +A L + + S
Sbjct: 212 DVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISIS 271
Query: 430 CHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++++ ++ + F+ A+S +P ++ + D
Sbjct: 272 APSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEID 308
Score = 89 (36.4 bits), Expect = 5.5e-64, Sum P(4) = 5.5e-64
Identities = 38/138 (27%), Positives = 61/138 (44%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+EK + V+++ A + + L +RR F EI + E R+ +L ++ L
Sbjct: 339 MEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSD---NLK 395
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHN 633
D G+ +F K + T GF+ DL ALV AG I++ + + TA +
Sbjct: 396 ID-GAIDFAK-LAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIK--STPTTATDSSE 451
Query: 634 DNSSIAATQVMGKEDLVK 651
DN I T G E +K
Sbjct: 452 DNMEIDET-ANGDESSLK 468
Score = 45 (20.9 bits), Expect = 8.1e-39, Sum P(3) = 8.1e-39
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 915 DQADSVVVEYDDFVKVLRELSPS 937
+Q + ++Y+DF+K L + P+
Sbjct: 496 EQLSLLSIKYEDFLKALPTIQPT 518
Score = 39 (18.8 bits), Expect = 5.5e-64, Sum P(4) = 5.5e-64
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 266 EAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCS 303
E + +E D+ +F D L G++F+ C+ + S
Sbjct: 48 ENNEGEEDEDIFESMFFAKD--LTAGEIFTFCLTKDLS 83
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 597 (215.2 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 137/326 (42%), Positives = 199/326 (61%)
Query: 634 DNSSIAATQVMGK----EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILD 689
D ++ Q+ G D + A+ + +A G VPNV W D+G LED++ ++
Sbjct: 536 DQDPLSEEQMQGLCIELNDFIVALAEVQP-SAKREGFVTVPNVTWADIGALEDIRDELIM 594
Query: 690 TVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 748
+ P+ + D F + GL +G+LL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY
Sbjct: 595 AILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 654
Query: 749 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN 808
+GESE+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL
Sbjct: 655 VGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL- 711
Query: 809 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLL 865
++ Q +FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L
Sbjct: 712 ETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RVAILKTITKNGTKPPLD 770
Query: 866 EDVSLYSIAKKCPPN-FTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEY 924
EDV+L +IA N +TGAD+ AL +A A ++++ A + V +
Sbjct: 771 EDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVG------AGELKVSH 824
Query: 925 DDFVKVLRELSPSLSMAELKKYELLR 950
F +++ PS+S+ + YE L+
Sbjct: 825 KHFEDAFKKVKPSISIKDQVMYEALQ 850
Score = 456 (165.6 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 146/469 (31%), Positives = 239/469 (50%)
Query: 494 EFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPL 553
E+TE S D+D Y P + +L + +SE + T + + PL
Sbjct: 94 EYTE-SYSDDDSNMEDY-PDPQSANPMNSSLLSLYRRGNSESVSTTPKWGQREATTSTPL 151
Query: 554 TEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDL-----HALVADAGANL 608
+ + L P E S+ G F+ G +P DL ++ D+ +
Sbjct: 152 LTSKTGSV--PLKTPARE--SEGGW--FIDKTPGGKKESLPLDLSDDQSNSKKQDSEIQI 205
Query: 609 IRKSNS-EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAP 667
++ S+ E DK G AK N + +V G+ + + +++ K ++ L
Sbjct: 206 LKDSSLLESDKKRKGR----AKGKGNKRKTENLQEVDGEIEAL--LQKKAKARSTEL--- 256
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++ NVK+EDVGG + K + + + + H +++ G+ GVLL+GPPG GKTLLA
Sbjct: 257 QISNVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAH 315
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A+A E L L V PE+++ GESE+ +R++F +A S PC++F DE+D++ P R +
Sbjct: 316 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVA 375
Query: 787 GDSGGVMDRVVSQMLAEIDGLND--SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 844
S + R+V+Q+L +D LN+ ++ + +IGA+NRPD +DPAL R GRFD+ + +G+
Sbjct: 376 --SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGI 433
Query: 845 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLX 904
D + RER+L+ L RK +L E + +A P F GAD+ ALC +A A R VL
Sbjct: 434 -PDEAARERILQTLCRKLRLPETFNFCHLAH-LTPGFVGADLMALCREAAMCAVNR-VLM 490
Query: 905 XXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKY-ELLRDQ 952
+ + + + E D ++ E + S + EL++ LLRDQ
Sbjct: 491 KQQAQQKKK-PEIEGLPSEGDQEERLGAEPT-SETQDELQRLLGLLRDQ 537
Score = 98 (39.6 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L + F+ A S +P I
Sbjct: 300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCI 359
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 360 VFIDEID 366
Score = 39 (18.8 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 23/97 (23%), Positives = 39/97 (40%)
Query: 58 VGDDVSPSLQLPAGILRFSKDKIDISDAKFXXXXXXXXXXXXTCVLKQLSVTSGSLVLVK 117
+ DD S S + + I + SD K T L+++ +L+ K
Sbjct: 189 LSDDQSNSKKQDSEIQILKDSSLLESDKKRKGRAKGKGNKRKTENLQEVDGEIEALLQKK 248
Query: 118 -NAETTKQRIAQVVVLDP---PTTRKQVCDGDVHSKH 150
A +T+ +I+ V D T K+VC +H +H
Sbjct: 249 AKARSTELQISNVKFEDVGGNDATLKEVCKMLIHMRH 285
Score = 38 (18.4 bits), Expect = 1.1e-63, Sum P(4) = 1.1e-63
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 483 GLSSEVASVIREFTEPSAEDEDE 505
GL SE R EP++E +DE
Sbjct: 504 GLPSEGDQEERLGAEPTSETQDE 526
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 576 (207.8 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 133/309 (43%), Positives = 195/309 (63%)
Query: 648 DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLR 706
D + A+ S + +A G +P+V W D+G LEDV++ + + P+ + + F + GL
Sbjct: 555 DFIVALS-SVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLT 613
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
+GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GESE+ VR +FQ+AR++
Sbjct: 614 TPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNS 673
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
PCVIFFDE+D+L P R + +SG + RVV+Q+L E+DGL ++ Q +FI+ A+NRPD+I
Sbjct: 674 APCVIFFDEVDALCPRR-SDRESGASV-RVVNQLLTEMDGL-ENRQQVFIMAATNRPDII 730
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVSLYSIA--KKCPPNF 881
DPA+LRPGR DK LYVG+ R +LK +T+ + L DV+L IA ++C +
Sbjct: 731 DPAILRPGRLDKTLYVGLPPPED-RLAILKTITKDGTRPPLDTDVNLEEIAYSQQCDC-Y 788
Query: 882 TGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMA 941
TGAD+ AL +A A ++++ + + + F + R++ S+S
Sbjct: 789 TGADLSALVREASICALRQEMALPTTKSKKEK----GEIKISRKHFEEAFRKVKSSVSKK 844
Query: 942 ELKKYELLR 950
+ YE LR
Sbjct: 845 DQIMYEELR 853
Score = 414 (150.8 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 91/227 (40%), Positives = 142/227 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+VK+EDVGG ++ K I + + + H +++ G+ G LL+GPPG GKTLLA+A+
Sbjct: 255 PSVKFEDVGGNDETLKEICKML-IHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 313
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGD 788
A E L L V E+++ GESE+ +R++F +A PCV+F DE+D++ P R +
Sbjct: 314 AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVA-- 371
Query: 789 SGGVMDRVVSQMLAEIDGLND--SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
S + R+V+Q+L +D LN+ ++ + +IGA+NRPD +DPAL R GRFD+ + +G+
Sbjct: 372 SKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGI-P 430
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 893
D + RE++L+ L RK KL +A P + GAD+ ALC +A
Sbjct: 431 DEAAREKILQTLCRKLKLPGSFDFLHLAH-LTPGYVGADLMALCREA 476
Score = 93 (37.8 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 345 ALVLGGSIPSALPPDLLISGSNDFVPLQG--DTVKILASILAPTLCPSV---LSLKFRVA 399
+++L G + S P L S F + G +T+K + +L P V L +
Sbjct: 238 SILLKGKVKSKGPE--LYHPSVKFEDVGGNDETLKEICKMLIHVRHPEVYLHLGVVPPRG 295
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
LLHG PGCGK + + +A L + +++ + +++ ++ L + F+ A +P +
Sbjct: 296 FLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCV 355
Query: 460 LLLRDFD 466
L + + D
Sbjct: 356 LFIDEID 362
Score = 81 (33.6 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
QVL++ A + + L P +RR F EI +G E R ++L L + + +L GS +
Sbjct: 398 QVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREKILQTLCRKL-KLP---GSFD 453
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSS 637
F+ + T G++ DL AL +A N + + E + TA+ + +
Sbjct: 454 FLH-LAHLTPGYVGADLMALCREAAMCTVNRVLIKSEEQQRKYVQAGGNTAEESVGIETE 512
Query: 638 IAAT----QVMGKEDLVKAMERSKKRN 660
I Q+ KE+L + + KK++
Sbjct: 513 IPVEENTKQLPSKEELQRLLYLLKKQD 539
Score = 46 (21.3 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 915 DQADSVVVEYDDFVKVLRELSPS 937
DQ + +E +DF+ L + PS
Sbjct: 544 DQLQKLCIEMNDFIVALSSVQPS 566
Score = 39 (18.8 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 594 PRDLHALVADAGA-NLIRKSNSE----VDKNEPGESDLTAKVAHNDNSSIAATQV 643
P DL ++ L +K N + KNEP E+ + A ++ A+QV
Sbjct: 110 PEDLSTNHMNSSLMTLYKKGNPDSAPATPKNEPMETSTPVQTAPQTSTLSPASQV 164
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 602 (217.0 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 141/327 (43%), Positives = 203/327 (62%)
Query: 634 DNSSIAATQVMGK----EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILD 689
D I+ Q+ G D + A+ + +A G VPNV W DVG LED+++ +
Sbjct: 536 DQDPISEEQMQGLCLELNDFIVALSEVQP-SAKREGFVTVPNVTWADVGALEDIREELTM 594
Query: 690 TVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 748
+ P+ + + F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY
Sbjct: 595 AILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 654
Query: 749 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN 808
+GESE+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL
Sbjct: 655 VGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL- 711
Query: 809 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLL 865
++ Q +FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L
Sbjct: 712 ETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RVAILKTITKNGTKPPLD 770
Query: 866 EDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVE 923
EDV L +IA +C +TGAD+ AL +A A ++++ I A+ + V
Sbjct: 771 EDVDLEAIANDHRCDC-YTGADLSALVREASLCALRQEITGQKNG-----IGTAE-LTVS 823
Query: 924 YDDFVKVLRELSPSLSMAELKKYELLR 950
+ F + R++ PS+S+ + + YE L+
Sbjct: 824 HKHFEEAFRKVKPSISVKDQRMYEALQ 850
Score = 449 (163.1 bits), Expect = 4.7e-39, P = 4.7e-39
Identities = 132/419 (31%), Positives = 213/419 (50%)
Query: 494 EFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPL 553
E+TE S D+D Y P + +L + +S+ + T + + + PL
Sbjct: 94 EYTE-SYSDDDSNMEDY-PDPQSANHMNSSLLSLYRKGNSDSVSTTPKLEQREDATSSPL 151
Query: 554 TEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDL-----HALVADAGA-N 607
+ M L P E + G F+ G +P DL + D G N
Sbjct: 152 LSSKTDSM--PLKTPARE--PEGGW--FIDKTPGGQKESLPLDLSDDQSNCKKQDPGIQN 205
Query: 608 LIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAP 667
L S E DK AK N + + G+ + + +++ K ++ L
Sbjct: 206 LKDSSLLESDKKRKSR----AKGKGNKRKTEGLQEADGEIEAI--LQKRAKAKSTEL--- 256
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++ +VK+EDVGG + K + + + + H +++ G+ GVLL+GPPG GKTLLA
Sbjct: 257 QISSVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAH 315
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A+A E L L V PE+++ GESE+ +RD+F +A S PC++F DE+D++ P R +
Sbjct: 316 AIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVA 375
Query: 787 GDSGGVMDRVVSQMLAEIDGLND--SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 844
S + R+V+Q+L +D LN+ ++ + ++GA+NRPD +DPAL R GRFD+ + +G+
Sbjct: 376 --SKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGI 433
Query: 845 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 903
+ S RER+L+ L RK +L E + +A P F GAD+ ALC +A A R ++
Sbjct: 434 PDEAS-RERILQTLCRKLRLPETFNFSHLAH-LTPGFVGADLMALCREAAVCAVHRVLM 490
Score = 96 (38.9 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L F+ A S +P I
Sbjct: 300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCI 359
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 360 VFIDEID 366
Score = 39 (18.8 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 119 AETTKQRIAQVVVLDP---PTTRKQVCDGDVHSKH 150
A++T+ +I+ V D T K+VC +H +H
Sbjct: 251 AKSTELQISSVKFEDVGGNDATLKEVCKMLIHMRH 285
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 601 (216.6 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 116/236 (49%), Positives = 162/236 (68%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++P V W D+GG+ +VK+ + +T+ PL +K L++ G+LLYGPPG GKTLLAK
Sbjct: 927 QIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAK 986
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A+A EC NF+SVKGPEL+ M+ GESE NVRD+F KAR+A PC+IFFDE+DSLA R S
Sbjct: 987 AIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERN-S 1045
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
+ DRV++Q+L EIDG+N+ + +FII A+NRPD++D AL RPGR DKL+Y+ +
Sbjct: 1046 NTNNDASDRVINQILTEIDGINEK-KTIFIIAATNRPDILDKALTRPGRLDKLIYISL-P 1103
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 902
D+ R + KA+ + L EDV ++ +AK+ F+GAD+ LC A A K +
Sbjct: 1104 DLKSRYSIFKAILKNTPLNEDVDIHDMAKRTE-GFSGADITNLCQSAVNEAIKETI 1158
Score = 443 (161.0 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 95/233 (40%), Positives = 147/233 (63%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
++ +ED+GG++ I + ++LPL + ++F S G+ GVL++G PGTGKT +AKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
E + + GPE+++ +IGESE+ +R IF+KA PC+IF DE+DS+A R S +
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
+ RVVSQ+L +DGL ++ ++ ++ A+NRP+ IDPAL R GRFD+ + + V D
Sbjct: 643 --LEKRVVSQLLTLMDGLKKNN-NVLVLAATNRPNSIDPALRRFGRFDREIEIPV-PDEQ 698
Query: 850 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 902
R +L T+K KL DV+L IAK+C + GAD+ LC +A K +
Sbjct: 699 GRYEILLTKTKKMKLDPDVNLRKIAKECH-GYVGADLAQLCFEAAIQCIKEHI 750
Score = 85 (35.0 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 377 KILASILAPTLCPSV-LSLKFRV--AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNL 433
KI I P P + +S+ VL+HG+PG GK ++ + +A + + +
Sbjct: 538 KIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEI 597
Query: 434 MASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRN 470
M+ ++ L + F A +P I+ + + D N
Sbjct: 598 MSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIAN 634
Score = 67 (28.6 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
VL++AA + + P +RR F EI + EQ R E+L + + +L D +
Sbjct: 664 VLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKM-KLDPDVNLRKI 722
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE 620
K+ G++ DL L +A I++ +D +E
Sbjct: 723 AKEC----HGYVGADLAQLCFEAAIQCIKEHIHFLDLDE 757
Score = 45 (20.9 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 137 TRKQVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLDRQVAYLSPLLAFNLDLHISSLKFL 196
T+K V D + + + FP+ L ++ E LD Y+S L+++ + L
Sbjct: 317 TQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGATVLL 376
Query: 197 VHQGKEVLESLFIAKVD 213
+GK+ E L IA++D
Sbjct: 377 --KGKKKREMLGIARLD 391
Score = 41 (19.5 bits), Expect = 4.9e-55, Sum P(3) = 4.9e-55
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDK 618
SE+ ++ I + S P + D+ AN KSN+E++K
Sbjct: 605 SEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK 645
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 601 (216.6 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 116/236 (49%), Positives = 162/236 (68%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++P V W D+GG+ +VK+ + +T+ PL +K L++ G+LLYGPPG GKTLLAK
Sbjct: 927 QIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAK 986
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A+A EC NF+SVKGPEL+ M+ GESE NVRD+F KAR+A PC+IFFDE+DSLA R S
Sbjct: 987 AIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERN-S 1045
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
+ DRV++Q+L EIDG+N+ + +FII A+NRPD++D AL RPGR DKL+Y+ +
Sbjct: 1046 NTNNDASDRVINQILTEIDGINEK-KTIFIIAATNRPDILDKALTRPGRLDKLIYISL-P 1103
Query: 847 DVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 902
D+ R + KA+ + L EDV ++ +AK+ F+GAD+ LC A A K +
Sbjct: 1104 DLKSRYSIFKAILKNTPLNEDVDIHDMAKRTE-GFSGADITNLCQSAVNEAIKETI 1158
Score = 443 (161.0 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 95/233 (40%), Positives = 147/233 (63%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
++ +ED+GG++ I + ++LPL + ++F S G+ GVL++G PGTGKT +AKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
E + + GPE+++ +IGESE+ +R IF+KA PC+IF DE+DS+A R S +
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
+ RVVSQ+L +DGL ++ ++ ++ A+NRP+ IDPAL R GRFD+ + + V D
Sbjct: 643 --LEKRVVSQLLTLMDGLKKNN-NVLVLAATNRPNSIDPALRRFGRFDREIEIPV-PDEQ 698
Query: 850 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 902
R +L T+K KL DV+L IAK+C + GAD+ LC +A K +
Sbjct: 699 GRYEILLTKTKKMKLDPDVNLRKIAKECH-GYVGADLAQLCFEAAIQCIKEHI 750
Score = 85 (35.0 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 377 KILASILAPTLCPSV-LSLKFRV--AVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNL 433
KI I P P + +S+ VL+HG+PG GK ++ + +A + + +
Sbjct: 538 KIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEI 597
Query: 434 MASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRN 470
M+ ++ L + F A +P I+ + + D N
Sbjct: 598 MSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIAN 634
Score = 67 (28.6 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
VL++AA + + P +RR F EI + EQ R E+L + + +L D +
Sbjct: 664 VLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKM-KLDPDVNLRKI 722
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE 620
K+ G++ DL L +A I++ +D +E
Sbjct: 723 AKEC----HGYVGADLAQLCFEAAIQCIKEHIHFLDLDE 757
Score = 45 (20.9 bits), Expect = 1.2e-62, Sum P(4) = 1.2e-62
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 137 TRKQVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLDRQVAYLSPLLAFNLDLHISSLKFL 196
T+K V D + + + FP+ L ++ E LD Y+S L+++ + L
Sbjct: 317 TQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGATVLL 376
Query: 197 VHQGKEVLESLFIAKVD 213
+GK+ E L IA++D
Sbjct: 377 --KGKKKREMLGIARLD 391
Score = 41 (19.5 bits), Expect = 4.9e-55, Sum P(3) = 4.9e-55
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDK 618
SE+ ++ I + S P + D+ AN KSN+E++K
Sbjct: 605 SEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK 645
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 571 (206.1 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 121/254 (47%), Positives = 163/254 (64%)
Query: 641 TQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDL 700
T +G ED A + + +A +VP V WEDVGG +VK +++ V+ P H+D
Sbjct: 691 TLSVGFEDFENAKTKIRP-SAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDA 749
Query: 701 FSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDI 759
F G R SG+L++GPPG KTL+A+AVA+E LNFL+VKGPEL + ++GESEK VR +
Sbjct: 750 FKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSL 809
Query: 760 FQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGA 819
F KAR+ P +IFFDE+DSLA RG D V DRV+SQ+L E+DGL+ + +I A
Sbjct: 810 FAKARANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRV-GVTVIAA 868
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
+NRPD ID ALLRPGRFD+LLYVG ++ RE +LK RK D+ L +A
Sbjct: 869 TNRPDKIDSALLRPGRFDRLLYVGPPNETD-REAILKIHLRKIPCSSDICLKELAS-ITK 926
Query: 880 NFTGADMYALCADA 893
+TGAD+ +C +A
Sbjct: 927 GYTGADISLICREA 940
Score = 413 (150.4 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 89/225 (39%), Positives = 135/225 (60%)
Query: 677 VGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF 736
+GGL + D + + L S GLR GVL++GPPGTGKT LA+ A +NF
Sbjct: 387 LGGLSKEYAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNF 446
Query: 737 LSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRV 796
SV GPE+I+ Y+GESEK + ++F+ A +A P V+F D+LD++APAR G+ + R+
Sbjct: 447 FSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEE--LSQRM 504
Query: 797 VSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 856
V+ +L +DG++ + + +I A+NRPD I+PAL RPGR D+ + +GV S R +L
Sbjct: 505 VATLLNLMDGIS-RTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQ-RSDILH 562
Query: 857 ALTRKFK-LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
+ R + L ++ + +A F GAD+ ALC +A F +R
Sbjct: 563 IILRGMRHSLSNIQVEQLAM-ATHGFVGADLSALCCEAAFVCLRR 606
Score = 103 (41.3 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 304 SMICIPCRQRLHRR-SDNIIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLI 362
S ICI C +R +R SD + + L + + G + L D
Sbjct: 319 SEICIFCVKRADKRPSDTSNRNHAFMINQETKVYLHHTLDLASEIQGRTFVQGLQFD--- 375
Query: 363 SGSN---DFVPLQGDTVK--ILASIL-APTLCPSVLSLKFRVA--VLLHGLPGCGKRTVV 414
G N + L G + + IL I+ + ++ S+ SL R VL+HG PG GK ++
Sbjct: 376 EGENVGCEISKLGGLSKEYAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLA 435
Query: 415 RYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
R AR G++ + +++ ++ AL + F +A + +P ++ + D D
Sbjct: 436 RTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLD 487
Score = 82 (33.9 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 30/114 (26%), Positives = 52/114 (45%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
V+++AA + + + P +RR EI +G + QR ++L +L+ + S+ E+
Sbjct: 521 VVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQL 580
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRK--SNSEVDKNEPGESDLTAKVAHN 633
T GF+ DL AL +A +R+ S N P E A+ + N
Sbjct: 581 AM----ATHGFVGADLSALCCEAAFVCLRRHLDQSSSSSNLPLEEAPIAESSSN 630
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 564 (203.6 bits), Expect = 2.8e-62, Sum P(4) = 2.8e-62
Identities = 132/309 (42%), Positives = 193/309 (62%)
Query: 648 DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLR 706
D A+ S + +A G VP+V W D+G LED+++ + + P+ + F + GL
Sbjct: 554 DFTVALS-SVQPSAKREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLM 612
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
+GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GESE+ VR +FQ+ARS+
Sbjct: 613 TPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSS 672
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
PCVIFFDE+D+L P R S G RVV+Q+L E+DGL ++ Q +FI+ A+NRPD+I
Sbjct: 673 APCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL-EARQQVFIMAATNRPDII 729
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVSLYSIAK--KCPPNF 881
DPA+LRPGR DK L+VG+ R +LK +T+ + L DV+L ++A +C +
Sbjct: 730 DPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTRPPLDADVNLEALAADLRCDC-Y 787
Query: 882 TGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMA 941
+GAD+ AL +A A +++++ D+ + + V F + +++ S+S
Sbjct: 788 SGADLSALVREASICALRQEMMRPKGGG-----DRGE-LKVSQKHFEEAFKKVKSSISKK 841
Query: 942 ELKKYELLR 950
+ YE LR
Sbjct: 842 DQVMYEALR 850
Score = 430 (156.4 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 109/302 (36%), Positives = 172/302 (56%)
Query: 611 KSNSEVDKNEPGESDLTAKVAHNDNSS--IAATQVMGKEDLVKA---MERSKKRNASALG 665
KSN + +E +S + + N+ + + K+D+ +A +E + A A G
Sbjct: 189 KSNHKQPGSEKEDSKDASLLESNEKRKGRLRSKGNKRKKDVQEADGEIEGVLHKKAKAKG 248
Query: 666 AP-KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
+V VK+EDVGG + K + + + + H +++ G GVLL+GPPG GKTL
Sbjct: 249 LELQVSRVKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTL 307
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LA A+A E L L V E+++ GESE+ +R++F++A S PCV+F DE+D++ P R
Sbjct: 308 LAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR 367
Query: 784 GASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRPGRFDKLLY 841
+ S + R+V+Q+L +D LN ++ + +IGA+NRPD +DPAL R GRFD+ +
Sbjct: 368 EVA--SKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREIC 425
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+G+ + S RER+L+ L RK +L E +A P F GAD+ ALC +A A R
Sbjct: 426 LGIPDEAS-RERILQTLCRKLRLPETFPFRHLAH-LTPGFVGADLMALCREAAMCAVSRV 483
Query: 902 VL 903
++
Sbjct: 484 LM 485
Score = 100 (40.3 bits), Expect = 2.8e-62, Sum P(4) = 2.8e-62
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 364 GSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI 423
G ND L+ + K+L + P + + ++ R VLLHG PGCGK + +A L +
Sbjct: 262 GGND-ATLK-EVCKMLIHMRHPEVYHHLGAVPPR-GVLLHGPPGCGKTLLAHAIAGELDL 318
Query: 424 HVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
+++ + +++ ++ L + F A S +P +L + + D
Sbjct: 319 PILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEID 361
Score = 74 (31.1 bits), Expect = 2.8e-62, Sum P(4) = 2.8e-62
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L E
Sbjct: 397 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLP-----ET 450
Query: 581 F-VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDL 626
F + + T GF+ DL AL +A + + + + +P + ++
Sbjct: 451 FPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQEQQPTDPEM 497
Score = 42 (19.8 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 915 DQADSVVVEYDDFVKVLRELSPS 937
+Q + +E++DF L + PS
Sbjct: 543 EQLQGLCIEWNDFTVALSSVQPS 565
Score = 37 (18.1 bits), Expect = 2.8e-62, Sum P(4) = 2.8e-62
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDL 276
P+ A+H+ S + + G +S+ +S E E R+ + +
Sbjct: 113 PQVANHMNSSLLSLYRKGHPDSV--TSTPEMEPRETTVSV 150
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 577 (208.2 bits), Expect = 3.0e-61, Sum P(2) = 3.0e-61
Identities = 136/328 (41%), Positives = 201/328 (61%)
Query: 634 DNSSIAATQVMGK----EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILD 689
D ++ Q+ G D + A+ S + +A G VPNV W D+G LED+++ +
Sbjct: 261 DQDPLSEEQMQGLCIELNDFIVALS-SVQPSAKREGFVTVPNVTWADIGALEDIREELTM 319
Query: 690 TVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 748
+ P+ + D F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY
Sbjct: 320 AILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 379
Query: 749 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN 808
+GESE+ VR +FQ+A+++ PCVIFFDE+D+L P R S G RVV+Q+L E+DGL
Sbjct: 380 VGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL- 436
Query: 809 DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLL 865
++ Q +FI+ A+NRPD+IDPA+LRPGR DK L+VG+ R +LK +T+ K L
Sbjct: 437 EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTKPPLD 495
Query: 866 EDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVE 923
DV+L +IA +C +TGAD+ AL +A A ++++ ++ + V
Sbjct: 496 ADVNLEAIAGDLRCDC-YTGADLSALVREASICALRQEMARQKSG------NEKGELKVS 548
Query: 924 YDDFVKVLRELSPSLSMAELKKYELLRD 951
+ F + +++ S+S + YE L++
Sbjct: 549 HKHFEEAFKKVRSSISKKDQIMYERLQE 576
Score = 321 (118.1 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 76/211 (36%), Positives = 121/211 (57%)
Query: 696 LHKDLFSSGLRKRSGVLL-YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEK 754
LH L GL ++ Y G + + + E L L V PE+++ GESE+
Sbjct: 11 LHMQLL--GLECNGAIMAHYSLNFPGSSGPPTSASRELDLPILKVAAPEIVSGVSGESEQ 68
Query: 755 NVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQ 812
+R++F++A S PC+IF DE+D++ P R + S + R+V+Q+L +D LN+ ++
Sbjct: 69 KLRELFEQAVSNAPCIIFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATA 126
Query: 813 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYS 872
+ +IGA+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L +
Sbjct: 127 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCH 185
Query: 873 IAKKCPPNFTGADMYALCADAWFHAAKRKVL 903
+A P F GAD+ ALC +A A R ++
Sbjct: 186 LAH-LTPGFVGADLMALCREAAMCAVNRVLM 215
Score = 80 (33.2 bits), Expect = 3.0e-61, Sum P(2) = 3.0e-61
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L + +
Sbjct: 127 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPQ---AFD 182
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAK 629
F + T GF+ DL AL +A N + E K P DL +K
Sbjct: 183 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSK 233
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 629 (226.5 bits), Expect = 4.1e-61, P = 4.1e-61
Identities = 181/587 (30%), Positives = 298/587 (50%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A LG+ + S ++++ ++ + + F A+S +P +
Sbjct: 211 VLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCL 270
Query: 460 LLLRDFDVF------------RNLVSNESLPNDQVGLSS---EVASVIREFTEPSAEDED 504
+ + + D R +V+ D++ + VI P + D
Sbjct: 271 MFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSA 330
Query: 505 EESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQ 564
G F +IC L V + D+ E + T+ + ++S G +Q +
Sbjct: 331 LRRAGRFD----REIC----LTVPSQDAREKILRTMAKGL--KLS-GDFDFRQLAKQTPG 379
Query: 565 LL-QPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGE 623
+ + LT+ G +K I + S DL++ D N + S+ +D N+
Sbjct: 380 YVGADLKALTAAAGIIA-IKRIFNEISPLNKLDLNS---DPRFNEL-DSDMALDSNDSLP 434
Query: 624 SDLTAKV-----AHNDNSSIAATQVMG--KEDLVKAMERSKKRNASALGAPKVPNVKWED 676
D ++ + AH D S + + +D ++A+ + + ++ G VP V W +
Sbjct: 435 LDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQP-SSKREGFATVPGVSWNN 493
Query: 677 VGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 735
+G L+ ++ + + P+ +L+ S G+ +GVLL+GPPG GKTLLAKAVA E N
Sbjct: 494 IGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKAN 553
Query: 736 FLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDR 795
F+S++GPEL+N Y+GESE+ VR +F +AR++ PCVIFFDELD++ P R S R
Sbjct: 554 FISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEAS--SR 611
Query: 796 VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVL 855
VV+ +L E+DGL+D S +++I A+NRPD+IDPA+LRPGR DK L V + D R +L
Sbjct: 612 VVNTLLTELDGLSDRS-GVYVIAATNRPDIIDPAMLRPGRLDKTLLVDL-PDAHERVEIL 669
Query: 856 KALTRKFKLLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXR 913
K LT++ L E+V+L + + +C NF+GAD+ AL +A A R +
Sbjct: 670 KTLTKQTPLHEEVNLDVLGRDERCS-NFSGADLAALVREAAV-TALRSAVFADIASNEPE 727
Query: 914 IDQ---ADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 957
I Q + + V DF + + PS+S + +KY+ L ++ +S
Sbjct: 728 ITQHSALEPIRVTNADFELAFKNIKPSVSDRDRQKYQRLAKRWSSAS 774
Score = 445 (161.7 bits), Expect = 9.0e-39, P = 9.0e-39
Identities = 103/301 (34%), Positives = 174/301 (57%)
Query: 607 NLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMG---KEDLVKAMERSKKRNASA 663
N+I KS + + + P ++ + ++ S+ + G ++D SK++ A A
Sbjct: 108 NVINKSITSL-WSSPNLKEIDGE---DEKKSVGQESITGSAKRKDRRSKTNGSKRQKAEA 163
Query: 664 LGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS-SGLRKRSGVLLYGPPGTGKT 722
P ++ D+GGL+D +L+ V +P+ H +++ +G+ GVLL+GPPG GKT
Sbjct: 164 NREPP-SDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKT 222
Query: 723 LLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPA 782
+LA A+A E + F+S+ P +++ GESEK VR++F++A+S PC++F DE+D++ P
Sbjct: 223 MLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPK 282
Query: 783 RGASGDSGGVMDRVVSQMLAEIDGLNDSSQD---LFIIGASNRPDLIDPALLRPGRFDKL 839
R ++ + R+V+Q L +D L+ D + +IGA+NRPD +D AL R GRFD+
Sbjct: 283 RESAQRE--MERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDRE 340
Query: 840 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
+ + V S + RE++L+ + + KL D +AK+ P + GAD+ AL A A A K
Sbjct: 341 ICLTVPSQDA-REKILRTMAKGLKLSGDFDFRQLAKQTP-GYVGADLKALTAAAGIIAIK 398
Query: 900 R 900
R
Sbjct: 399 R 399
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 555 (200.4 bits), Expect = 4.4e-61, Sum P(4) = 4.4e-61
Identities = 123/262 (46%), Positives = 175/262 (66%)
Query: 648 DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLR 706
D A+ S + +A G VP+V W D+G LED+++ + + P+ + F + GL
Sbjct: 549 DFTVALS-SVQPSAKREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLM 607
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
+GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY+GESE+ VR +FQ+ARS+
Sbjct: 608 TPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSS 667
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
PCVIFFDE+D+L P R S G RVV+Q+L E+DGL ++ Q +FI+ A+NRPD+I
Sbjct: 668 APCVIFFDEVDALCPRR--SDRETGASVRVVNQLLTEMDGL-EARQQVFIMAATNRPDII 724
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFKLLEDVSLYSIAK--KCPPNF 881
DPA+LRPGR DK L+VG+ R +LK +T+ + L DV+L ++A +C +
Sbjct: 725 DPAILRPGRLDKTLFVGLPPPAD-RLAILKTITKNGTRPPLDADVNLEALAADLRCDC-Y 782
Query: 882 TGADMYALCADAWFHAAKRKVL 903
+GAD+ AL +A A +++++
Sbjct: 783 SGADLSALVREASICALRQEMM 804
Score = 430 (156.4 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 109/302 (36%), Positives = 172/302 (56%)
Query: 611 KSNSEVDKNEPGESDLTAKVAHNDNSS--IAATQVMGKEDLVKA---MERSKKRNASALG 665
KSN + +E +S + + N+ + + K+D+ +A +E + A A G
Sbjct: 189 KSNHKQPGSEKEDSKDASLLESNEKRKGRLRSKGNKRKKDVQEADGEIEGVLHKKAKAKG 248
Query: 666 AP-KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
+V VK+EDVGG + K + + + + H +++ G GVLL+GPPG GKTL
Sbjct: 249 LELQVSRVKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTL 307
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LA A+A E L L V E+++ GESE+ +R++F++A S PCV+F DE+D++ P R
Sbjct: 308 LAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR 367
Query: 784 GASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRPGRFDKLLY 841
+ S + R+V+Q+L +D LN ++ + +IGA+NRPD +DPAL R GRFD+ +
Sbjct: 368 EVA--SKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREIC 425
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+G+ + S RER+L+ L RK +L E +A P F GAD+ ALC +A A R
Sbjct: 426 LGIPDEAS-RERILQTLCRKLRLPETFPFRHLAH-LTPGFVGADLMALCREAAMCAVSRV 483
Query: 902 VL 903
++
Sbjct: 484 LM 485
Score = 100 (40.3 bits), Expect = 4.4e-61, Sum P(4) = 4.4e-61
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 364 GSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGI 423
G ND L+ + K+L + P + + ++ R VLLHG PGCGK + +A L +
Sbjct: 262 GGND-ATLK-EVCKMLIHMRHPEVYHHLGAVPPR-GVLLHGPPGCGKTLLAHAIAGELDL 318
Query: 424 HVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
+++ + +++ ++ L + F A S +P +L + + D
Sbjct: 319 PILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEID 361
Score = 74 (31.1 bits), Expect = 4.4e-61, Sum P(4) = 4.4e-61
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L E
Sbjct: 397 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLP-----ET 450
Query: 581 F-VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDL 626
F + + T GF+ DL AL +A + + + + +P + ++
Sbjct: 451 FPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQEQQPTDPEM 497
Score = 42 (19.8 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 915 DQADSVVVEYDDFVKVLRELSPS 937
+Q + +E++DF L + PS
Sbjct: 538 EQLQGLCIEWNDFTVALSSVQPS 560
Score = 37 (18.1 bits), Expect = 4.4e-61, Sum P(4) = 4.4e-61
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQEKIDL 276
P+ A+H+ S + + G +S+ +S E E R+ + +
Sbjct: 113 PQVANHMNSSLLSLYRKGHPDSV--TSTPEMEPRETTVSV 150
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 578 (208.5 bits), Expect = 2.4e-60, Sum P(3) = 2.4e-60
Identities = 132/313 (42%), Positives = 198/313 (63%)
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAAT 641
++D+ +T ++ DL A+V +A I+++ S + K+ G D+ A
Sbjct: 472 LEDLASRTHAYVGADLAAVVREAALRAIKRTIS-LQKDTSG-LDI-----------FGAV 518
Query: 642 QVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF 701
Q+ +DL A+ S +++A + PNV W D+GG E+VK+ + ++V+ PL H + F
Sbjct: 519 QM---DDLEFALS-SVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETF 574
Query: 702 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 760
S G+R GVLLYGPPG KT+ AKA+ATE LNF++VKGPEL + ++GESE+ VR +F
Sbjct: 575 SRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVF 634
Query: 761 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGAS 820
QKAR A P VIFFDE+D+L RG S DRVV+ +L E+DG+ ++ +++ ++ A+
Sbjct: 635 QKARQASPSVIFFDEIDALTANRGEDNSS----DRVVAALLNELDGI-EALRNVLVLAAT 689
Query: 821 NRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPN 880
NRPD+IDPAL+RPGR D+LLYVG + R++++K K K EDV L IA+K
Sbjct: 690 NRPDMIDPALMRPGRLDRLLYVGP-PNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTE-G 747
Query: 881 FTGADMYALCADA 893
+GA++ ALC +A
Sbjct: 748 CSGAEVVALCQEA 760
Score = 394 (143.8 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 114/366 (31%), Positives = 193/366 (52%)
Query: 547 EISMGPLTEQQRVEMLSQLLQP-VSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAG 605
EI+ G L+ Q E+ S P V+E S+ + E + ++ + +++H +
Sbjct: 162 EINSG-LSAQSGTEVGSSQSSPSVNE--SEPKATEDLDEL--SPGSYKVKEIHIR---SP 213
Query: 606 ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALG 665
+NLI ++ S++ +EP TA A++ + DL+K + ++A G
Sbjct: 214 SNLI-EAISDMSLDEPRIYKFTA----------ASSMEIETPDLLKLPHEDRTQSAYNQG 262
Query: 666 APKVPN-------VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPP 717
+ + N V + +GGL+ I D V+LP + +LF + GVLLYGPP
Sbjct: 263 SEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPP 322
Query: 718 GTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELD 777
GTGKT++ +AVA E + ++ GP ++ Y+GE+E +R IF+ AR+ +P +IF DE+D
Sbjct: 323 GTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEID 382
Query: 778 SLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD 837
+LAP R + D R V+ +L +DG+ ++ + + +I A+NRP+ ID AL RPGR +
Sbjct: 383 ALAPKR--TEDVSEAESRAVATLLTLLDGMANAGK-VVVIAATNRPNSIDEALRRPGRLE 439
Query: 838 KLLYVGVNSDVSYRERVLKALTRKF-KLLEDVSLYSIAKKCPPNFTGADMYALCADAWFH 896
K + +G+ D S R ++K L + D L +A + + GAD+ A+ +A
Sbjct: 440 KEIEIGI-PDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHA-YVGADLAAVVREAALR 497
Query: 897 AAKRKV 902
A KR +
Sbjct: 498 AIKRTI 503
Score = 87 (35.7 bits), Expect = 2.4e-60, Sum P(3) = 2.4e-60
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK V+R VA V +++ +T + L + F A+++ P+I
Sbjct: 316 VLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSI 375
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 376 IFIDEID 382
Score = 63 (27.2 bits), Expect = 7.9e-58, Sum P(3) = 7.9e-58
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 481 QVGLSSEVASVIREFTEPSA-EDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPT 539
+VG SS+ + + E +EP A ED DE S G + VKEI I L+ A +D S P
Sbjct: 174 EVG-SSQSSPSVNE-SEPKATEDLDELSPGSYKVKEIH-IRSPSNLIEAISDMSLDEPRI 230
Query: 540 IRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+ F+ SM E + ++L + ++ + GSEE
Sbjct: 231 YK--FTAASSM----EIETPDLLKLPHEDRTQSAYNQGSEE 265
Score = 41 (19.5 bits), Expect = 2.4e-60, Sum P(3) = 2.4e-60
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 177 YLSPLLAFNLDLHISSLKFLVHQGKEVL 204
+LSP L L S + +L H+G E +
Sbjct: 25 FLSPAALNRLKLSPSQVIYLKHKGGEAV 52
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 575 (207.5 bits), Expect = 9.5e-60, Sum P(3) = 9.5e-60
Identities = 116/251 (46%), Positives = 173/251 (68%)
Query: 648 DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLR 706
D KA+ + ++ K ++ W+ +GGL +V++ ++DT+QLP + +LF++ +R
Sbjct: 491 DFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIR 550
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
+R+G+LLYGPPGTGKTLLA +A E +NF+SVKGPEL++ YIG SE+ VRDIF +A++A
Sbjct: 551 QRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAA 610
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+ + Q ++++ A++RPDLI
Sbjct: 611 KPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLQGVYVLAATSRPDLI 667
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
DPALLRPGR DK +Y VS R +L L+ L +DV L +A +FTGAD+
Sbjct: 668 DPALLRPGRLDKCVYCPPPDQVS-RLEILNVLSDSLPLADDVDLQHVAS-VTDSFTGADL 725
Query: 887 YALCADAWFHA 897
AL +A A
Sbjct: 726 KALLYNAQLEA 736
Score = 113 (44.8 bits), Expect = 9.5e-60, Sum P(3) = 9.5e-60
Identities = 66/258 (25%), Positives = 111/258 (43%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVAR----RLGIHVV 426
L+ T +L L+ L V L+ A+LL G G GK T+ + + + +L HV
Sbjct: 245 LEHITHSLLGRPLSRQLMSLVAGLR-NGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVE 303
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVS---NESLPN--DQ 481
C L L AF+ A P+++LL D D+ L + +E P+
Sbjct: 304 RVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQS 363
Query: 482 VGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIR 541
L+ + +I+EF S G V I QQ L S++G+ I
Sbjct: 364 QRLAHALNDMIKEFI----------SMGSL-VALIATSQSQQSLHPLLV-SAQGVH--IF 409
Query: 542 RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV 601
+C H + P ++QR E+L +++ + + ++ ++ + +T GF+ RD LV
Sbjct: 410 QCVQH---IQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLV 466
Query: 602 ADA-GANLIRKSNSEVDK 618
A + L R+S S +K
Sbjct: 467 DRAIHSRLSRQSISTREK 484
Score = 37 (18.1 bits), Expect = 9.5e-60, Sum P(3) = 9.5e-60
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 227 KLGLQSVGQLP 237
KLGL + GQ+P
Sbjct: 83 KLGLSNGGQIP 93
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 597 (215.2 bits), Expect = 3.5e-59, Sum P(3) = 3.5e-59
Identities = 125/240 (52%), Positives = 172/240 (71%)
Query: 659 RNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPP 717
RN S L PK ++ W+ +GGL+DV++ ++DT+ LP + +LF++ +R+RSGVLLYG P
Sbjct: 835 RNVS-LHKPK--DIGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAP 891
Query: 718 GTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELD 777
GTGKTLLA VA E +NF+SVKGPEL++ YIG SE+ VRDIF +A++A+PC++FFDE D
Sbjct: 892 GTGKTLLAGVVARESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFD 951
Query: 778 SLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD 837
S+AP RG D+ GV DRVV+Q+L ++DG+ + Q ++++ A++RPDLIDPALLRPGR D
Sbjct: 952 SIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLQGVYVLAATSRPDLIDPALLRPGRLD 1008
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K LY D S R +LKAL+ L DV L +A K +FTGAD+ AL +A A
Sbjct: 1009 KCLYCPP-PDQSSRCEILKALSHSLSLANDVDLEYLAAKTE-HFTGADLKALLYNAQLEA 1066
Score = 88 (36.0 bits), Expect = 3.5e-59, Sum P(3) = 3.5e-59
Identities = 55/222 (24%), Positives = 94/222 (42%)
Query: 400 VLLHGLPGCGKRTVVRYVAR----RLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSY 455
VLL G G GK T+ + + + RL HV C L + +AF A
Sbjct: 603 VLLTGGKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLEASWR 662
Query: 456 SPTILLLRDFDVFRNLVSNESLPND-QVGLSSEVASVIREFTEPSAEDEDEESHGYFPVK 514
P+I+LL D D + N + SS +A V+++ + + S G +
Sbjct: 663 QPSIILLDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIK------EVISLG--SLI 714
Query: 515 EIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTS 574
+ + + L + S++G I +CF + P ++QR EML +++ ++L
Sbjct: 715 ALIATSQSEHALHPSLVSAQGTH--IFQCF--KCIQSP-DQKQRCEMLCSVIK--NKLNC 767
Query: 575 DTG--SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNS 614
D S+ ++ + +T GF+ RD LV A I N+
Sbjct: 768 DVKKFSDLDLQYVAKETEGFVARDFTMLVDRAIHACISNQNA 809
Score = 44 (20.5 bits), Expect = 3.5e-59, Sum P(3) = 3.5e-59
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 918 DSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFE 954
+++++ + L + PS+S + K + L D F+
Sbjct: 1233 NTLIITQSHLMTALEGIRPSISQDDWKNFTELYDNFQ 1269
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 575 (207.5 bits), Expect = 3.9e-59, Sum P(2) = 3.9e-59
Identities = 116/251 (46%), Positives = 173/251 (68%)
Query: 648 DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLR 706
D KA+ + ++ K ++ W+ +GGL +V++ ++DT+QLP + +LF++ +R
Sbjct: 813 DFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIR 872
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
+R+G+LLYGPPGTGKTLLA +A E +NF+SVKGPEL++ YIG SE+ VRDIF +A++A
Sbjct: 873 QRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAA 932
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+ + Q ++++ A++RPDLI
Sbjct: 933 KPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLQGVYVLAATSRPDLI 989
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
DPALLRPGR DK +Y VS R +L L+ L +DV L +A +FTGAD+
Sbjct: 990 DPALLRPGRLDKCVYCPPPDQVS-RLEILNVLSDSLPLADDVDLQHVAS-VTDSFTGADL 1047
Query: 887 YALCADAWFHA 897
AL +A A
Sbjct: 1048 KALLYNAQLEA 1058
Score = 113 (44.8 bits), Expect = 3.9e-59, Sum P(2) = 3.9e-59
Identities = 66/258 (25%), Positives = 111/258 (43%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVAR----RLGIHVV 426
L+ T +L L+ L V L+ A+LL G G GK T+ + + + +L HV
Sbjct: 567 LEHITHSLLGRPLSRQLMSLVAGLR-NGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVE 625
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVS---NESLPN--DQ 481
C L L AF+ A P+++LL D D+ L + +E P+
Sbjct: 626 RVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQS 685
Query: 482 VGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIR 541
L+ + +I+EF S G V I QQ L S++G+ I
Sbjct: 686 QRLAHALNDMIKEFI----------SMGSL-VALIATSQSQQSLHPLLV-SAQGVH--IF 731
Query: 542 RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV 601
+C H + P ++QR E+L +++ + + ++ ++ + +T GF+ RD LV
Sbjct: 732 QCVQH---IQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLV 788
Query: 602 ADA-GANLIRKSNSEVDK 618
A + L R+S S +K
Sbjct: 789 DRAIHSRLSRQSISTREK 806
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 564 (203.6 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 149/406 (36%), Positives = 225/406 (55%)
Query: 559 VEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRK--SNSEV 616
+ + ++ + +SEL ++ S VKD M D +L A+ ++I+K SE
Sbjct: 416 ISAIKRIFETMSELQEESHS---VKD------DSMDADPVSLDANK-EDMIKKFEQKSEA 465
Query: 617 DKNEPGESDLTAKVAHND--NSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+K + L H D N A + +D V A+ S + +A G +P+V W
Sbjct: 466 EKLSTIKKFLNM---HPDPLNQEQLAPLAITYQDFVNALP-SVQPSAKREGFATIPDVTW 521
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
++VG L ++ + + P+ +L+ G+ +GVL++GPPG GKTLLAKAVA E
Sbjct: 522 QNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESR 581
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVM 793
NF+S+KGPEL+N Y+GESEK VR +FQ+AR++ PC+IFFDELD+L P R S
Sbjct: 582 ANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESS-- 639
Query: 794 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 853
RVV+ +L E+DGLND + +F+IGA+NRPD+IDPA+LRPGR DK LY+ + + R
Sbjct: 640 SRVVNTLLTELDGLNDR-KGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEE-RLE 697
Query: 854 VLKALTRKFK--LLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKR------KVL 903
+LK L R L +V L +I++ +C NF+GAD+ +L +A A K+ K+
Sbjct: 698 ILKTLVRTSNSPLHANVDLNAISRDSRCG-NFSGADLSSLVKEAGVWALKKRFFQNQKIQ 756
Query: 904 XXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELL 949
D + + +DF L + PS+S + +YE L
Sbjct: 757 ELDSSGFYEDSIGEDDISITAEDFDHALSSIRPSVSDRDRMRYEKL 802
Score = 447 (162.4 bits), Expect = 6.9e-39, P = 6.9e-39
Identities = 113/356 (31%), Positives = 185/356 (51%)
Query: 606 ANLIRKSNSEVDKNEP--GESDLTAKVAHNDNSSIAATQVM-GKEDLVKAMERSKKRNAS 662
+N I KS + E GESD V + + T+++ G + K +++ +
Sbjct: 124 SNAINKSVVSLWNQEKTDGESD---GVNNEEGQQADTTELLKGNKRKAKGSAKTQLKKQK 180
Query: 663 ALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGK 721
PN+ +GG+E V +L+ + LP+LH +++SS G+ GVLLYGPPG GK
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 722 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 781
T +A A+A E + F+++ P +++ GESEK +R+IF++A+ PC+IF DE+D++ P
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300
Query: 782 ARGASGDSGGVMDRVVSQMLAEIDGLN---DSSQDLFIIGASNRPDLIDPALLRPGRFDK 838
R G + R+V+Q+L +D L + + +IGA+NRPD +D AL R GRFD+
Sbjct: 301 KRDG-GAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDR 359
Query: 839 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSL-YSIAKKCPPNFTGADMYALCADAWFHA 897
+ + V ++ R +LKA+T+ KL Y K P + GAD+ +L A A
Sbjct: 360 EICLNVPNE-EQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISA 418
Query: 898 AKR---KVLXXXXXXXXXRIDQADSVVVEYD----DFVKVLRELSPSLSMAELKKY 946
KR + + D D+ V D D +K + S + ++ +KK+
Sbjct: 419 IKRIFETMSELQEESHSVKDDSMDADPVSLDANKEDMIKKFEQKSEAEKLSTIKKF 474
Score = 105 (42.0 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 375 TVKILASILAPTLCPSVLS---LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431
T ++L I P L P + S ++ VLL+G PGCGK T+ +A L + + S
Sbjct: 202 TTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAP 261
Query: 432 NLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++++ ++ L + F A+ +P ++ + + D
Sbjct: 262 SVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEID 296
Score = 102 (41.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 37/155 (23%), Positives = 70/155 (45%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+EK + V+++ A + + L +RR F EI + E+QR+ +L + + +
Sbjct: 327 LEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIK--- 383
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHN 633
+ G +++ T G++ DL +LV AG + I++ + +E E + K
Sbjct: 384 LENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETM--SELQEESHSVKDDSM 441
Query: 634 DNSSIAATQVMGKEDLVKAMERSKKRNASALGAPK 668
D ++ KED++K E+ K A L K
Sbjct: 442 DADPVSLDA--NKEDMIKKFEQ--KSEAEKLSTIK 472
Score = 41 (19.5 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
Identities = 37/145 (25%), Positives = 58/145 (40%)
Query: 254 GTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQR 313
G KGS+ + + ++ KID + N +D + G V SV +I +P
Sbjct: 163 GNKRKAKGSAKTQLKKQKRKIDYSTPN---ID-LSSLGGVESVTTQ--LLEIIGLPI--- 213
Query: 314 LHRRSDNIIYFKVVAVEPSEETVLR--VNCTKTALV--LGGSIPSALPPDLLISGSNDFV 369
LH IY VEP +L C KT + L G + P + IS +
Sbjct: 214 LHPE----IYSST-GVEPPRGVLLYGPPGCGKTTIANALAGELKV---PFINISAPSVVS 265
Query: 370 PLQGDTVKILASIL--APTLCPSVL 392
+ G++ K L I A + P ++
Sbjct: 266 GMSGESEKKLREIFEEAKQIAPCLI 290
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 564 (203.6 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 149/406 (36%), Positives = 225/406 (55%)
Query: 559 VEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRK--SNSEV 616
+ + ++ + +SEL ++ S VKD M D +L A+ ++I+K SE
Sbjct: 416 ISAIKRIFETMSELQEESHS---VKD------DSMDADPVSLDANK-EDMIKKFEQKSEA 465
Query: 617 DKNEPGESDLTAKVAHND--NSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+K + L H D N A + +D V A+ S + +A G +P+V W
Sbjct: 466 EKLSTIKKFLNM---HPDPLNQEQLAPLAITYQDFVNALP-SVQPSAKREGFATIPDVTW 521
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
++VG L ++ + + P+ +L+ G+ +GVL++GPPG GKTLLAKAVA E
Sbjct: 522 QNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESR 581
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVM 793
NF+S+KGPEL+N Y+GESEK VR +FQ+AR++ PC+IFFDELD+L P R S
Sbjct: 582 ANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESS-- 639
Query: 794 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 853
RVV+ +L E+DGLND + +F+IGA+NRPD+IDPA+LRPGR DK LY+ + + R
Sbjct: 640 SRVVNTLLTELDGLNDR-KGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEE-RLE 697
Query: 854 VLKALTRKFK--LLEDVSLYSIAK--KCPPNFTGADMYALCADAWFHAAKR------KVL 903
+LK L R L +V L +I++ +C NF+GAD+ +L +A A K+ K+
Sbjct: 698 ILKTLVRTSNSPLHANVDLNAISRDSRCG-NFSGADLSSLVKEAGVWALKKRFFQNQKIQ 756
Query: 904 XXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELL 949
D + + +DF L + PS+S + +YE L
Sbjct: 757 ELDSSGFYEDSIGEDDISITAEDFDHALSSIRPSVSDRDRMRYEKL 802
Score = 447 (162.4 bits), Expect = 6.9e-39, P = 6.9e-39
Identities = 113/356 (31%), Positives = 185/356 (51%)
Query: 606 ANLIRKSNSEVDKNEP--GESDLTAKVAHNDNSSIAATQVM-GKEDLVKAMERSKKRNAS 662
+N I KS + E GESD V + + T+++ G + K +++ +
Sbjct: 124 SNAINKSVVSLWNQEKTDGESD---GVNNEEGQQADTTELLKGNKRKAKGSAKTQLKKQK 180
Query: 663 ALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGK 721
PN+ +GG+E V +L+ + LP+LH +++SS G+ GVLLYGPPG GK
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 722 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 781
T +A A+A E + F+++ P +++ GESEK +R+IF++A+ PC+IF DE+D++ P
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300
Query: 782 ARGASGDSGGVMDRVVSQMLAEIDGLN---DSSQDLFIIGASNRPDLIDPALLRPGRFDK 838
R G + R+V+Q+L +D L + + +IGA+NRPD +D AL R GRFD+
Sbjct: 301 KRDG-GAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDR 359
Query: 839 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSL-YSIAKKCPPNFTGADMYALCADAWFHA 897
+ + V ++ R +LKA+T+ KL Y K P + GAD+ +L A A
Sbjct: 360 EICLNVPNE-EQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISA 418
Query: 898 AKR---KVLXXXXXXXXXRIDQADSVVVEYD----DFVKVLRELSPSLSMAELKKY 946
KR + + D D+ V D D +K + S + ++ +KK+
Sbjct: 419 IKRIFETMSELQEESHSVKDDSMDADPVSLDANKEDMIKKFEQKSEAEKLSTIKKF 474
Score = 105 (42.0 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 375 TVKILASILAPTLCPSVLS---LKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCH 431
T ++L I P L P + S ++ VLL+G PGCGK T+ +A L + + S
Sbjct: 202 TTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAP 261
Query: 432 NLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++++ ++ L + F A+ +P ++ + + D
Sbjct: 262 SVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEID 296
Score = 102 (41.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 37/155 (23%), Positives = 70/155 (45%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELT 573
+EK + V+++ A + + L +RR F EI + E+QR+ +L + + +
Sbjct: 327 LEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIK--- 383
Query: 574 SDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHN 633
+ G +++ T G++ DL +LV AG + I++ + +E E + K
Sbjct: 384 LENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETM--SELQEESHSVKDDSM 441
Query: 634 DNSSIAATQVMGKEDLVKAMERSKKRNASALGAPK 668
D ++ KED++K E+ K A L K
Sbjct: 442 DADPVSLDA--NKEDMIKKFEQ--KSEAEKLSTIK 472
Score = 41 (19.5 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
Identities = 37/145 (25%), Positives = 58/145 (40%)
Query: 254 GTLESLKGSSAIEAEDRQEKIDLALHNYFEVDRYLARGDVFSVCINWNCSSMICIPCRQR 313
G KGS+ + + ++ KID + N +D + G V SV +I +P
Sbjct: 163 GNKRKAKGSAKTQLKKQKRKIDYSTPN---ID-LSSLGGVESVTTQ--LLEIIGLPI--- 213
Query: 314 LHRRSDNIIYFKVVAVEPSEETVLR--VNCTKTALV--LGGSIPSALPPDLLISGSNDFV 369
LH IY VEP +L C KT + L G + P + IS +
Sbjct: 214 LHPE----IYSST-GVEPPRGVLLYGPPGCGKTTIANALAGELKV---PFINISAPSVVS 265
Query: 370 PLQGDTVKILASIL--APTLCPSVL 392
+ G++ K L I A + P ++
Sbjct: 266 GMSGESEKKLREIFEEAKQIAPCLI 290
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 592 (213.5 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 132/324 (40%), Positives = 202/324 (62%)
Query: 582 VKDIIG-QTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAA 640
VK+ +G S F DL + D A + R VD+ S L+ + +SS
Sbjct: 754 VKNKLGCDISNFPDLDLQCIAKDTEAFVARDFTVLVDRAI--HSSLSRQ-----HSSSRE 806
Query: 641 TQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDL 700
+ D KA+ + + K ++ W+ +GGL +V++ ++DT+QLP + +L
Sbjct: 807 DLTLTTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPEL 866
Query: 701 FSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDI 759
F++ +R+R+G+LLYGPPGTGKTLLA VA E +NF+S+KGPEL++ YIG SE+ VRD+
Sbjct: 867 FANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDV 926
Query: 760 FQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGA 819
F +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+ + Q ++++ A
Sbjct: 927 FIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLQGVYVLAA 983
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
++RPDLIDPALLRPGR DK +Y VS R +L L++ L +DV L +A
Sbjct: 984 TSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILTVLSKSLALADDVDLQHVAS-VTD 1041
Query: 880 NFTGADMYALCADAWFHAAKRKVL 903
+FTGAD+ AL +A A + ++L
Sbjct: 1042 SFTGADLKALLYNAQLEALQGRLL 1065
Score = 88 (36.0 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 66/271 (24%), Positives = 112/271 (41%)
Query: 356 LPPDLLISGSNDFVPLQGDTVK-ILASILAPTLCPSVLSLKFRV---AVLLHGLPGCGKR 411
L P L +S L ++ I S+L L +++L + A+L+ G G GK
Sbjct: 548 LLPSLTLSSLGGVSALGASAMEHITHSLLGRPLSRQLMALVAGLRNGALLITGGKGSGKS 607
Query: 412 TVVRYVARR----LGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDV 467
T + + + L V C L AL AF+ A P+++LL D D+
Sbjct: 608 TFAKAICKEAQDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDL 667
Query: 468 FRNLVS-NESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLL 526
L S E + + S +A + + + S G V I QQ L
Sbjct: 668 IAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEFV------STGSL-VALIATSQLQQSLH 720
Query: 527 VAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS--EEFVKD 584
+ S++G+ T + C H + P +QR E+L +++ ++L D + + ++
Sbjct: 721 PSLV-SAQGIH-TFQ-CVQH---LQPPNPEQRCEILHSVVK--NKLGCDISNFPDLDLQC 772
Query: 585 IIGQTSGFMPRDLHALVADA-GANLIRKSNS 614
I T F+ RD LV A ++L R+ +S
Sbjct: 773 IAKDTEAFVARDFTVLVDRAIHSSLSRQHSS 803
Score = 43 (20.2 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 447 QAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEP 498
QA A + PT L + F + N + N QVG ++S + F P
Sbjct: 45 QAIEVASDHQPTYLSWVEGRHFNDQSENVAEINRQVGQKLGLSSGDQVFLRP 96
Score = 37 (18.1 bits), Expect = 4.3e-53, Sum P(2) = 4.3e-53
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 372 QGDTVKILASILAPTLCPSVL 392
+G TV +L+SIL + VL
Sbjct: 512 EGKTVFVLSSILLQKISVQVL 532
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 572 (206.4 bits), Expect = 7.7e-58, Sum P(2) = 7.7e-58
Identities = 136/372 (36%), Positives = 212/372 (56%)
Query: 523 QVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFV 582
QVL++ A + L +RR + + + + L +LQ + + +E +
Sbjct: 492 QVLVLGATNRPHALDAALRRPGRFDKEI-EIGVPNAADRLD-ILQKLLQRVPHLLTEVEL 549
Query: 583 KDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQ 642
+ G++ DL AL +AG +R+ V +P SD S +A
Sbjct: 550 LQLANSAHGYVGADLKALCNEAGLYALRR----VLNKQPNLSD----------SKMAGLV 595
Query: 643 VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF- 701
+ D ++ M + +A A VPNV W D+GGLE++K + V+ PL H + F
Sbjct: 596 KITLNDFLQGMNDIRP-SAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFI 654
Query: 702 SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQ 761
G++ GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+IF+
Sbjct: 655 RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 714
Query: 762 KARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASN 821
KAR+ P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +D+ I+ A+N
Sbjct: 715 KARAVSPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGI-EQLKDVTILAATN 773
Query: 822 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 881
RPD ID AL+RPGR D+++YV + D + R +L + DV+L + + +
Sbjct: 774 RPDRIDKALMRPGRIDRIIYVPL-PDAATRREILNLQFHSMPISNDVNLDELIFQTD-TY 831
Query: 882 TGADMYALCADA 893
+GA++ A+C +A
Sbjct: 832 SGAEIIAVCREA 843
Score = 446 (162.1 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 104/275 (37%), Positives = 158/275 (57%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++ +GGL K+I + ++LPL +LF S G+ GVLLYGPPGTGKT++A+AVA
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E + GPE+I+ + GE+E +R IF +A P +IF DELD+L P R G
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQN 467
Query: 791 GVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
V RVV+ +L +DG+ + + ++GA+NRP +D AL RPGRFDK + +GV +
Sbjct: 468 EVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAA 527
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXX 908
+ + K L R LL +V L +A + GAD+ ALC +A +A +R VL
Sbjct: 528 DRLDILQKLLQRVPHLLTEVELLQLANSAH-GYVGADLKALCNEAGLYALRR-VLNKQPN 585
Query: 909 XXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
++ A V + +DF++ + ++ PS +M E+
Sbjct: 586 LSDSKM--AGLVKITLNDFLQGMNDIRPS-AMREV 617
Score = 92 (37.4 bits), Expect = 7.7e-58, Sum P(2) = 7.7e-58
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 390 VLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 449
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 450 IFIDELD 456
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 611 (220.1 bits), Expect = 9.2e-58, Sum P(2) = 9.2e-58
Identities = 146/375 (38%), Positives = 217/375 (57%)
Query: 524 VLLVAAADSSEGLPPTIR--RCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
++++A SS+ L +I+ F I + T ++RVE+L + L+ + D S
Sbjct: 730 IVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQGKQLKDQQSLNL 789
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAAT 641
+K G++ D+ +V D +L S E++ N D ND+ +I
Sbjct: 790 MK-FSASMEGYLGCDVEQIV-DRSIHL--SSIKEIENNNNNNDD-------NDDDNIIEF 838
Query: 642 QVM--GKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKD 699
++ KE + K ++S +KW+D+GGL+ V+ + +T++ P +
Sbjct: 839 SIIEKAKEGYTPITLKGIKLHSS--------EIKWQDIGGLDSVRAMLKETIEWPTKYPK 890
Query: 700 LF-SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRD 758
LF SS LR RSG+LLYGP G GKTLLA A+A EC LNF+SVKGPEL+N YIG SE+ VRD
Sbjct: 891 LFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRD 950
Query: 759 IFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIG 818
+F +A SA+PCV+FFDE DS+AP RG D+ GV DRVV+Q L ++DG+ + ++++
Sbjct: 951 VFSRASSAKPCVLFFDEFDSIAPRRGH--DNSGVTDRVVNQFLTQLDGV-EGLTGVYVLA 1007
Query: 819 ASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP 878
A++RPDLIDPALLRPGR DK LY + + + R +L L K L +SL ++
Sbjct: 1008 ATSRPDLIDPALLRPGRLDKSLYCNI-PEFNERLDILTCLKSKMNLSPSISLEQLSTNTQ 1066
Query: 879 PNFTGADMYALCADA 893
+TGAD+ AL +A
Sbjct: 1067 -YYTGADLRALMYNA 1080
Score = 59 (25.8 bits), Expect = 9.2e-58, Sum P(2) = 9.2e-58
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 931 LRELSPSLSMAELKKYELLRDQF 953
L+E SPS+S +E KKYE + + F
Sbjct: 1184 LKESSPSISESERKKYERIYNNF 1206
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 575 (207.5 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 124/287 (43%), Positives = 187/287 (65%)
Query: 625 DLTAKVAHNDNSSIAATQVMGKEDLV-------KAMERSKKRNASALGAPKVPNVKWEDV 677
D T V +S ++ ++ +E+LV KA++ + + K ++ W+ +
Sbjct: 767 DFTVLVDRAIHSHLSHQRITTREELVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKI 826
Query: 678 GGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF 736
GGL +V++ + DT+QLP + +LF++ +R+R GVLLYGPPGTGKTLLA +A E +NF
Sbjct: 827 GGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNF 886
Query: 737 LSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRV 796
+SVKGPEL++ YIG SE+ VRDIF +A++A+PC++FFDE +S+AP RG D+ GV DRV
Sbjct: 887 ISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRV 944
Query: 797 VSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 856
V+Q+L ++DG+ + Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L
Sbjct: 945 VNQLLTQLDGV-EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILN 1002
Query: 857 ALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 903
L+ L +DV L +A +FTGAD+ AL +A A ++L
Sbjct: 1003 VLSDSLPLADDVDLQHVAS-VTNSFTGADLKALLYNAQLEAVHGRLL 1048
Score = 98 (39.6 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 53/235 (22%), Positives = 96/235 (40%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR----LGIHVV 426
L+ T +L L+ L V L+ A+L G G GK T+ + + + L HV
Sbjct: 551 LEHITHSLLGRPLSRQLMSLVAGLR-NGALLFTGGKGSGKSTLAKAICKEASDTLDAHVE 609
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSS 486
C L + AF+ A P+++LL D D+ +V + P + G +
Sbjct: 610 VVGCKALRGKRLENIQKTVELAFSEATWRQPSVILLDDLDL---IVGVPAAPEHEHGPEA 666
Query: 487 EVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSH 546
+ + + D +E + + + Q L S++G+ I +C H
Sbjct: 667 VQSQRLAH----ALSDMMKEFISMGSLVAVIATSQSQHSLHPWLVSAQGIH--IFQCVQH 720
Query: 547 EISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV 601
+ P ++QR E+L +++ + + + +K I +T GF+ RD LV
Sbjct: 721 ---IQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLV 772
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 575 (207.5 bits), Expect = 2.4e-57, Sum P(2) = 2.4e-57
Identities = 124/287 (43%), Positives = 187/287 (65%)
Query: 625 DLTAKVAHNDNSSIAATQVMGKEDLV-------KAMERSKKRNASALGAPKVPNVKWEDV 677
D T V +S ++ ++ +E+LV KA++ + + K ++ W+ +
Sbjct: 916 DFTVLVDRAIHSHLSHQRITTREELVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKI 975
Query: 678 GGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF 736
GGL +V++ + DT+QLP + +LF++ +R+R GVLLYGPPGTGKTLLA +A E +NF
Sbjct: 976 GGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNF 1035
Query: 737 LSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRV 796
+SVKGPEL++ YIG SE+ VRDIF +A++A+PC++FFDE +S+AP RG D+ GV DRV
Sbjct: 1036 ISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRV 1093
Query: 797 VSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLK 856
V+Q+L ++DG+ + Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L
Sbjct: 1094 VNQLLTQLDGV-EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILN 1151
Query: 857 ALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 903
L+ L +DV L +A +FTGAD+ AL +A A ++L
Sbjct: 1152 VLSDSLPLADDVDLQHVAS-VTNSFTGADLKALLYNAQLEAVHGRLL 1197
Score = 98 (39.6 bits), Expect = 2.4e-57, Sum P(2) = 2.4e-57
Identities = 53/235 (22%), Positives = 96/235 (40%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARR----LGIHVV 426
L+ T +L L+ L V L+ A+L G G GK T+ + + + L HV
Sbjct: 700 LEHITHSLLGRPLSRQLMSLVAGLR-NGALLFTGGKGSGKSTLAKAICKEASDTLDAHVE 758
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSS 486
C L + AF+ A P+++LL D D+ +V + P + G +
Sbjct: 759 VVGCKALRGKRLENIQKTVELAFSEATWRQPSVILLDDLDL---IVGVPAAPEHEHGPEA 815
Query: 487 EVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSH 546
+ + + D +E + + + Q L S++G+ I +C H
Sbjct: 816 VQSQRLAH----ALSDMMKEFISMGSLVAVIATSQSQHSLHPWLVSAQGIH--IFQCVQH 869
Query: 547 EISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV 601
+ P ++QR E+L +++ + + + +K I +T GF+ RD LV
Sbjct: 870 ---IQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLV 921
Score = 41 (19.5 bits), Expect = 2.4e-51, Sum P(2) = 2.4e-51
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 465 FDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQV 524
FD+ +N + +S E IRE + + + D ++ G + EK ++
Sbjct: 126 FDMLKNSLHQQSS-------EEETDEGIRELVDITLKKMDYDNDGKISFADFEKAVKEDK 178
Query: 525 LLV 527
LL+
Sbjct: 179 LLL 181
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 553 (199.7 bits), Expect = 5.3e-57, Sum P(3) = 5.3e-57
Identities = 134/313 (42%), Positives = 184/313 (58%)
Query: 646 KEDLVKAMERS---KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
KED +AM R+ + A + + WEDVGG+ D+K +I + ++LP +F+
Sbjct: 813 KEDFTRAMHDFVPVAMRDITK-SASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFA 871
Query: 703 -SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQ 761
S LR RS VLLYGPPG GKT + A A CSL F+SVKGPEL+N YIG SE+ VRDIF
Sbjct: 872 KSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
Query: 762 KARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASN 821
KA +A PC++FFDE DS+AP RG D+ GV DRVV+Q L E+DG+ + +F+ A++
Sbjct: 932 KAAAAAPCILFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV-EVLTGVFVFAATS 988
Query: 822 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 881
RPDL+DPALLRPGR D+LL S R +L L+RK + +D+ L IA F
Sbjct: 989 RPDLLDPALLRPGRLDRLLLCDFPSPPE-RLEILTVLSRKLLMADDIDLEPIALMTE-GF 1046
Query: 882 TGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVK-VLRELSPSLSM 940
+GAD+ AL +DA AA + L + + + D +K + + PS+S
Sbjct: 1047 SGADLQALLSDAQL-AAVHEYLNREDK------PETGTTPIITDPLLKSIASKTKPSVSE 1099
Query: 941 AELKKYELLRDQF 953
E +K + QF
Sbjct: 1100 TEKQKLYDIYSQF 1112
Score = 115 (45.5 bits), Expect = 5.3e-57, Sum P(3) = 5.3e-57
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 317 RSDNIIYFKVVAVEPS-EETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQGDT 375
+SDN+++ + V + + E + + +T G S PD IS P+ D
Sbjct: 518 KSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKGVS------PD--ISSLTWMGPIVSDV 569
Query: 376 VKILASILAPTLCPSVLSLKFRVA----VLLHGLPGCGKRTVVRYVARR------LGIHV 425
+K + +L+P + KF++ +L++G PG GK + R A+ L HV
Sbjct: 570 IKRMTVLLSPAA--GMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHV 627
Query: 426 VEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLS 485
+ SC L + L+ ++P++++L D D +++S+ S D G
Sbjct: 628 ILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVIILDDLD---SIISSSS---DTEGTQ 681
Query: 486 SEVA-SVIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC- 543
+ V +++ +F +D E + + + VA+ S E +P T+
Sbjct: 682 ASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLA--------FVASVQSLEQIPQTLSSSG 733
Query: 544 -FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV- 601
F + + +R +L +Q + D SE+ + ++ + G+ DL LV
Sbjct: 734 RFDFHVQLAAPATSERGAILKHEIQ---KRLLDC-SEDILLNLAAKCEGYDAYDLEILVD 789
Query: 602 ----ADAGANLIRKSNSEVDKNEPGESDLTAKVAHN 633
A G +L +SN + K + D T + H+
Sbjct: 790 RAVHAAIGRHLPLESN--ISKYNLVKEDFT-RAMHD 822
Score = 44 (20.5 bits), Expect = 1.4e-49, Sum P(3) = 1.4e-49
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 363 SGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGKRTVVR---YVAR 419
+G + +V L+G V I A +L P V + VL G G VR +
Sbjct: 322 AGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTDRLGNNNSVRKSSHPPS 381
Query: 420 RLG--IHVVEYSCHNLMASS 437
L + VV++S H+ + ++
Sbjct: 382 GLSTYVDVVDWSVHDKVVTA 401
Score = 42 (19.8 bits), Expect = 5.3e-57, Sum P(3) = 5.3e-57
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 314 LHRRSDNIIYFKVVAVEPSEETVLRVNCTKTAL 346
LH R+ +I F VV+ PS+ V V T+ A+
Sbjct: 150 LHDRT--VIRFSVVSTFPSKGVVQLVPGTEVAV 180
Score = 39 (18.8 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 33 LVLSSTKLLINSVLSSSRRVTGENLVGDDVSPSLQLPAGILRFSKDK 79
+++ S +L + + L S + G N+ D P+L L + + S+++
Sbjct: 311 MMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENE 357
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 608 (219.1 bits), Expect = 5.6e-57, P = 5.6e-57
Identities = 154/516 (29%), Positives = 271/516 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LL+G PG GK + R VA + + + +++ T L + F A SP+I
Sbjct: 349 ILLYGPPGTGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSI 408
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVKEIEKI 519
+ + + D L + +V + + + D+ G
Sbjct: 409 IFIDELDA---LCPKREDNSSEV--EKRIVGSLLTLMDGVVSTSDQNDGGGGDNGNGNGN 463
Query: 520 CR-QQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
C +V+++ + + + +RR F +EI + +Q R ++L+ L S++ +
Sbjct: 464 CGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFL---SKIPNQL 520
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGA---NLIRKSNSE------VDKNEPGESDLT 627
S+E I +T GF+ D+ +L +A N I+ N + ++K E G+ +
Sbjct: 521 TSQEIAM-IASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEE-- 577
Query: 628 AKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSI 687
K N + ++ + + D++ A+ + K + + ++P V W D+GG E +K+ +
Sbjct: 578 -KQEENLQNLLSLIK-LSMNDMLLALNQVKPSSMREV-VVEIPKVFWGDIGGQEHIKQKL 634
Query: 688 LDTVQLPLLHKDLF-SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN 746
+ ++ PL + F G++ G+LLYGPPG KTLLAKA+ATE LNF++VKGPEL++
Sbjct: 635 KEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLS 694
Query: 747 MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG 806
++GESE+ VRDIF+KAR P ++FFDE+D LA +R SG+ G ++RVVSQ+L E+DG
Sbjct: 695 KWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISR--SGEGSGAVERVVSQLLTEMDG 752
Query: 807 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLE 866
+ + ++ IIGA+NRPD+ID A+LR GR D++LY+ D+ R+ + +K
Sbjct: 753 IQPLT-NVTIIGATNRPDIIDKAILRAGRIDRILYISP-PDLDARKEIFNIHLKKVPHSS 810
Query: 867 DVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 902
D+ + ++ ++GA++ ++C +A A K +
Sbjct: 811 DIDINQLSI-LTDGYSGAEVTSICREASIAAMKEDI 845
Score = 274 (101.5 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 59/178 (33%), Positives = 101/178 (56%)
Query: 635 NSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLP 694
NS++ +T + E + + + + + + K N+ ++ +GGL+ K I + + L
Sbjct: 274 NSNLQSTLIC--ESTINSNNNNNNNSNNKIDNNKNINLNFQSIGGLDLQVKQIRELIDLS 331
Query: 695 LLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE 753
DL S G++ G+LLYGPPGTGKTLLA+ VAT+ + ++ G ++++ + G +E
Sbjct: 332 FYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQTNATLFTINGADILDKFYGMTE 391
Query: 754 KNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSS 811
K ++ IF+ A P +IF DELD+L P R +S V R+V +L +DG+ +S
Sbjct: 392 KTLQKIFKDAAQKSPSIIFIDELDALCPKR--EDNSSEVEKRIVGSLLTLMDGVVSTS 447
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 555 (200.4 bits), Expect = 7.7e-57, Sum P(2) = 7.7e-57
Identities = 121/284 (42%), Positives = 184/284 (64%)
Query: 626 LTAKVAHN--DNSSIAATQ--VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLE 681
L + H+ N S++ + V+ D KA++ + + K ++ W+ +GGL
Sbjct: 790 LVDRAIHSRLSNQSVSTREELVLTTLDFQKALQGFVPASLRNVNLHKPRDLGWDHIGGLR 849
Query: 682 DVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 740
+V++ ++DT+QLP + +LF++ +R+R+GVLLYGPPGTGKTLLA VA E + L ++
Sbjct: 850 EVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARESGMILLVLR 909
Query: 741 -GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 799
GPEL++ YIG SE+ VRDIF +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q
Sbjct: 910 YGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQ 967
Query: 800 MLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALT 859
+L ++DG+ + Q ++++ A++RPDLIDPALLRPGR DK +Y VS R +L L+
Sbjct: 968 LLTQLDGV-EGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILNVLS 1025
Query: 860 RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVL 903
L EDV L +A +FTGAD+ AL +A A ++L
Sbjct: 1026 ASLPLAEDVDLQHVAS-LTDSFTGADLKALLYNAQLEALHGRLL 1068
Score = 113 (44.8 bits), Expect = 7.7e-57, Sum P(2) = 7.7e-57
Identities = 61/250 (24%), Positives = 103/250 (41%)
Query: 378 ILASILAPTLCPSVLSLKFRV---AVLLHGLPGCGKRTVVRYVARR----LGIHVVEYSC 430
I S+L L ++SL + A+LL G G GK T+ + + + L HV C
Sbjct: 573 ITHSLLGRPLSRQLMSLMAGLRNGALLLTGGKGSGKSTLAKAICKEAFDVLDAHVEIVDC 632
Query: 431 HNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVAS 490
L + AF+ A P+++LL D D+ L +LP + S E
Sbjct: 633 KALRGKRLENLQKTIVAAFSEASWRQPSVVLLDDLDLVAGL---PALPEHEH--SPEAVQ 687
Query: 491 VIREFTEPSAEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISM 550
R + D +E + + + Q L S++G+ + +C H +
Sbjct: 688 SQR--LAHALNDMTKELISMGSLVALIATSQSQHSLHPLLVSAQGIH--LFQCVQH---I 740
Query: 551 GPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIR 610
P ++QR E+L ++ + ++ ++ +K I +T GF+ RD LV D + R
Sbjct: 741 QPPDQEQRCEILHNAIKNKLDCDMNSFTDLDLKRIAKETEGFVARDFIVLV-DRAIHS-R 798
Query: 611 KSNSEVDKNE 620
SN V E
Sbjct: 799 LSNQSVSTRE 808
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 527 (190.6 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 108/228 (47%), Positives = 155/228 (67%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++P V W D+GG E++K + + +QLPL + F+ G+ GVLLYGPPG KTL AK
Sbjct: 509 EMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAK 568
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A+ATE +NFL+VKGPE+ N Y+GESE+ +R+IF+KARSA P +IFFDE+D+L+P R
Sbjct: 569 ALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDR--D 626
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
G S + V++ +L EIDG+ + + + I+ A+NRPD ID ALLRPGR D+ +YVG
Sbjct: 627 GSSTSAANHVLTSLLNEIDGVEEL-KGVVIVAATNRPDEIDAALLRPGRLDRHIYVGP-P 684
Query: 847 DVSYRERVLKALTRKFKLLED-VSLYSIAKKCPPNFTGADMYALCADA 893
DV+ R +LK T+KF E V L+ +A + ++GA++ LC +A
Sbjct: 685 DVNARLEILKKCTKKFNTEESGVDLHELADRTE-GYSGAEVVLLCQEA 731
Score = 433 (157.5 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 133/451 (29%), Positives = 229/451 (50%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSD 575
+ KI +L++A A E P + + S+G L R+E+ +QP
Sbjct: 71 VGKIGENGILVIARAGDEEVHPVNVITLSTTIRSVGNLILGDRLELKKAQVQPPYATKVT 130
Query: 576 TGS-----------EEFVKDIIGQTSGFMP----RDLHALVADAGANLIRKSNSEVDKNE 620
GS E+ ++ ++ + MP ++L D +++ S+ +
Sbjct: 131 VGSLQGYNILECMEEKVIQKLLDDSGVIMPGMIFQNLKTKAGDESIDVVITDASDDSLPD 190
Query: 621 PGESDLTAKVAHN--DNSSIAATQVMGKEDLVKAMERSKKRNASA-LGAPKVPNVKWEDV 677
+ DL + DN + + ++ + SK+ A+ P+ P + + V
Sbjct: 191 VSQLDLNMDDMYGGLDNLFYLSPPFIFRKGSTH-ITFSKETQANRKYNLPE-P-LSYAAV 247
Query: 678 GGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF 736
GGL+ +S+ +++PL LFSS G+ G+LL+GPPGTGKT+L + VA + +
Sbjct: 248 GGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHV 307
Query: 737 LSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRV 796
L++ GP +++ Y+GE+E +RDIF +AR +P +IF DE+DS+AP R A+ DSG V RV
Sbjct: 308 LTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNR-ANDDSGEVESRV 366
Query: 797 VSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVL- 855
V+ +L +DG+ + + + +I A+NRP+ +DPAL RPGRFD+ + +G+ DV R +L
Sbjct: 367 VATLLTLMDGMGAAGK-VVVIAATNRPNSVDPALRRPGRFDQEVEIGI-PDVDARFDILT 424
Query: 856 KALTRKFK---LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXX 912
K +R +L+ ++ IA K + GAD+ ALC ++ +R +
Sbjct: 425 KQFSRMSSDRHVLDSEAIKYIASKTH-GYVGADLTALCRESVMKTIQRGL------GTDA 477
Query: 913 RIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
ID+ S+ V D + ++ PS +M E+
Sbjct: 478 NIDKF-SLKVTLKDVESAMVDIRPS-AMREI 506
Score = 155 (59.6 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 51/166 (30%), Positives = 78/166 (46%)
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDL---FIIGASNRPDLIDPALLRPGRFDKLLYV 842
S D G + +L + D ++L I+ A+NRPD ID ALLRPGR D+ +YV
Sbjct: 622 SPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV 681
Query: 843 GVNSDVSYRERVLKALTRKFKLLED-VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
G DV+ R +LK T+KF E V L+ +A + ++GA++ LC +A A
Sbjct: 682 GP-PDVNARLEILKKCTKKFNTEESGVDLHELADRTE-GYSGAEVVLLCQEAGLAAI--- 736
Query: 902 VLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
++ D VE F K + ++ ++ L YE
Sbjct: 737 ------------MEDLDVAKVELRHFEKAFKGIARGITPEMLSYYE 770
Score = 124 (48.7 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 37/127 (29%), Positives = 65/127 (51%)
Query: 371 LQGDTVKILASILAPTLCPSVLSLKFRVA----VLLHGLPGCGKRTVVRYVARRLGIHVV 426
L + + ++I P P++ S F V+ +LLHG PG GK ++R VA HV+
Sbjct: 250 LDKEIESLKSAIEIPLHQPTLFS-SFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVL 308
Query: 427 EYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVG-LS 485
+ ++++ +T AAL FN A+ Y P+I+ + + D ++ N + ND G +
Sbjct: 309 TINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEID---SIAPNRA--NDDSGEVE 363
Query: 486 SEVASVI 492
S V + +
Sbjct: 364 SRVVATL 370
Score = 82 (33.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PGC K + +A GI+ + + ++ A+ + F A+S +P+I
Sbjct: 553 VLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSI 612
Query: 460 LLLRDFD 466
+ + D
Sbjct: 613 IFFDEID 619
Score = 49 (22.3 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 599 ALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKK 658
AL ++G N + E+ GES+ + S A + + E + A+ S
Sbjct: 569 ALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDE--IDAL--SPD 624
Query: 659 RNASALGAPK-VPNVKWEDVGGLEDVKKSIL 688
R+ S+ A V ++ G+E++K ++
Sbjct: 625 RDGSSTSAANHVLTSLLNEIDGVEELKGVVI 655
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 554 (200.1 bits), Expect = 2.2e-56, Sum P(2) = 2.2e-56
Identities = 134/377 (35%), Positives = 212/377 (56%)
Query: 518 KICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTG 577
++ QVL++ A + L +RR + + + + L +LQ +
Sbjct: 487 EVSEGQVLVLGATNRPHALDAALRRPGRFDKEI-EIGVPNAQDRLD-ILQKLLRRVPHLL 544
Query: 578 SEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSS 637
+E + + G++ DL L +AG +R+ + K +P D+ KVA
Sbjct: 545 TEAELLQLANSAHGYVGADLKVLCNEAGLCALRR----ILKKQPNLPDV--KVA------ 592
Query: 638 IAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLH 697
++ K D ++AM + + A VPNV W D+GGLE +K + V+ PL H
Sbjct: 593 -GLVKITLK-DFLQAMNDIRPSAMREI-AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKH 649
Query: 698 KDLF-SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNV 756
+ F G++ GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ V
Sbjct: 650 PESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAV 709
Query: 757 RDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFI 816
R+ F+KAR+ P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +D+ I
Sbjct: 710 RETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGI-EQLKDVTI 768
Query: 817 IGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKK 876
+ A+NRPD ID AL+RPGR D+++YV + D + R + K + +V L + +
Sbjct: 769 LAATNRPDRIDKALMRPGRIDRIIYVPL-PDAATRREIFKLQFHSMPVSNEVDLDELILQ 827
Query: 877 CPPNFTGADMYALCADA 893
++GA++ A+C +A
Sbjct: 828 TDA-YSGAEIVAVCREA 843
Score = 433 (157.5 bits), Expect = 3.1e-37, P = 3.1e-37
Identities = 102/275 (37%), Positives = 154/275 (56%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++ +GGL K+I + ++LPL +LF S G+ GVLLYGPPGTGKT++A+AVA
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E + GPE+I+ + GE+E +R IF +A P +IF DELD+L P R G
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQN 467
Query: 791 GVMDRVVSQMLAEIDGLND--SSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
V RVV+ +L +DG+ S + ++GA+NRP +D AL RPGRFDK + +GV +
Sbjct: 468 EVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQ 527
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXX 908
+ + K L R LL + L +A + GAD+ LC +A A R++L
Sbjct: 528 DRLDILQKLLRRVPHLLTEAELLQLANSAH-GYVGADLKVLCNEAGL-CALRRILKKQPN 585
Query: 909 XXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
++ A V + DF++ + ++ PS +M E+
Sbjct: 586 LPDVKV--AGLVKITLKDFLQAMNDIRPS-AMREI 617
Score = 99 (39.9 bits), Expect = 2.2e-56, Sum P(2) = 2.2e-56
Identities = 41/132 (31%), Positives = 57/132 (43%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 390 VLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSI 449
Query: 460 LLLRDFDVF---RNLVSNE-------SLPNDQVGLSSEVAS----VIREFTEPSAEDEDE 505
+ + + D R NE SL G+ SEV+ V+ P A D
Sbjct: 450 IFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAAL 509
Query: 506 ESHGYFPVKEIE 517
G F KEIE
Sbjct: 510 RRPGRFD-KEIE 520
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 558 (201.5 bits), Expect = 7.9e-56, Sum P(2) = 7.9e-56
Identities = 122/313 (38%), Positives = 190/313 (60%)
Query: 591 GFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLV 650
G++ DL AL +AG + +R+ V + +P D S +A + D +
Sbjct: 558 GYVGADLKALCNEAGLHALRR----VLRKQPNLPD----------SKVAGMVKITLNDFL 603
Query: 651 KAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRS 709
+ M + +A A VPNV W D+GGLE++K + V+ PL H F+ G++
Sbjct: 604 QGMNDIRP-SAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPK 662
Query: 710 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 769
GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+IF+KAR+ P
Sbjct: 663 GVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPS 722
Query: 770 VIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPA 829
+IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +++ ++ A+NRPD ID A
Sbjct: 723 IIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKNVTVLAATNRPDRIDKA 781
Query: 830 LLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYAL 889
L+RPGR D+++YV + D + R +L + +V L + + ++GA++ A+
Sbjct: 782 LMRPGRIDRIIYVPL-PDAATRREILNLQFHSMPISNEVDLDELVLQTD-TYSGAEIIAV 839
Query: 890 CADAWFHAAKRKV 902
C +A A + +
Sbjct: 840 CKEAALLALEENI 852
Score = 443 (161.0 bits), Expect = 2.5e-38, P = 2.5e-38
Identities = 122/365 (33%), Positives = 185/365 (50%)
Query: 601 VADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRN 660
V AG L+ + S D + G + T D+S TQ + +E L+K K N
Sbjct: 260 VNKAGEVLLDVTQSPRDGSGLGLEESTGLKCSFDSSKEGNTQPVSEEKLLKPASAGTKSN 319
Query: 661 ASA---------LGAPKV-PNVKWED---------VGGLEDVKKSILDTVQLPLLHKDLF 701
+ K+ N K +D +GGL K+I + ++LPL +LF
Sbjct: 320 TDTFYFISSTTRINLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELF 379
Query: 702 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 760
S G+ G+LLYGPPGTGKT++A+AVA E + GPE+I+ + GE+E +R IF
Sbjct: 380 KSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIF 439
Query: 761 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIG 818
+A P +IF DELD+L P R G V RVV+ +L +DG+ + + ++G
Sbjct: 440 AEATLRHPSIIFIDELDALCPKR--EGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLG 497
Query: 819 ASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP 878
A+NRP +D AL RPGRFDK + +G+ + + + K L R LL L +A
Sbjct: 498 ATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAH 557
Query: 879 PNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSL 938
+ GAD+ ALC +A HA +R VL ++ A V + +DF++ + ++ PS
Sbjct: 558 -GYVGADLKALCNEAGLHALRR-VLRKQPNLPDSKV--AGMVKITLNDFLQGMNDIRPS- 612
Query: 939 SMAEL 943
+M E+
Sbjct: 613 AMREV 617
Score = 89 (36.4 bits), Expect = 7.9e-56, Sum P(2) = 7.9e-56
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 390 LLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 449
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 450 IFIDELD 456
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 465 (168.7 bits), Expect = 9.6e-56, Sum P(3) = 9.6e-56
Identities = 99/229 (43%), Positives = 145/229 (63%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF-SSGLRKRSGVLLYGPPGTGKTLLAK 726
++P V W+DVGGL+D+KK + V+ P+ H F G+ G+LL+GPPG KT LAK
Sbjct: 279 EIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAK 338
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG-- 784
A A +F S+ EL +MY+GE E +R+ FQ+AR A P +IFFDE D +A RG
Sbjct: 339 AAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDE 398
Query: 785 ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 844
+S +S V +R++S +L E+DGL ++ + + ++ A+NRP ID AL+RPGRFD +LYV
Sbjct: 399 SSSNSSTVGERLLSTLLTEMDGLEEA-KGILVLAATNRPYAIDAALMRPGRFDLVLYVPP 457
Query: 845 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 893
D+ R +L+ TR L +DV L IA++ FTGA++ LC ++
Sbjct: 458 -PDLEARFEILQVHTRNMTLGDDVDLRKIAEETDL-FTGAELEGLCRES 504
Score = 344 (126.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 87/240 (36%), Positives = 131/240 (54%)
Query: 671 NVKWE---DVGGLEDVKKSILDTVQLPLLHK-DLFSSGLRKRSGVLLYGPPGTGKTLLAK 726
N KW ++GG E +++ + + P + + + GL+ G+LLYGPPGTGKT L +
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA----RPCVIFFDELDSLAPA 782
AV EC + + + + + GESEK +R+ F +A S +P VIF DE+D L P
Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134
Query: 783 RGASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRPGRFDKLL 840
R A + R+ SQ+ +D SS + ++ ++NR D IDPAL R GRFD L+
Sbjct: 135 RDARREQDV---RIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALV 191
Query: 841 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
V ++ R ++L+ T+K L V L +IA C + GAD+ ALC +A A+KR
Sbjct: 192 EVSTPNEED-RLKILQLYTKKVNLDPSVDLQAIAISCN-GYVGADLEALCREATISASKR 249
Score = 106 (42.4 bits), Expect = 9.6e-56, Sum P(3) = 9.6e-56
Identities = 30/113 (26%), Positives = 60/113 (53%)
Query: 392 LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNL----MASSERKTSAALAQ 447
L LK+ +LL+G PG GK ++VR V + H++ S H++ SE+ A A+
Sbjct: 51 LGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAE 110
Query: 448 AFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSA 500
A + A S P+++ + + DV ++ V ++S++ +++ + +PS+
Sbjct: 111 ASSHAVSDKPSVIFIDEIDVL--CPRRDARREQDVRIASQLFTLM-DSNKPSS 160
Score = 60 (26.2 bits), Expect = 9.6e-56, Sum P(3) = 9.6e-56
Identities = 21/96 (21%), Positives = 49/96 (51%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+V++VA+ + + + P +RR F + + E+ R+++L QL ++ D +
Sbjct: 164 RVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKIL-QLY--TKKVNLDPSVD- 219
Query: 581 FVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEV 616
++ I +G++ DL AL +A + ++S+ +
Sbjct: 220 -LQAIAISCNGYVGADLEALCREATISASKRSSDSL 254
Score = 46 (21.3 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 597 LHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAAT 641
+ A+V + A+LI S V + GES+ + A + SS A +
Sbjct: 73 VRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVS 117
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 583 (210.3 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 129/318 (40%), Positives = 206/318 (64%)
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
D++ +T G++P DL L +D + + +++E + E++ T N+++ +
Sbjct: 660 DLVSETEGYLPNDLKIL-SDRIYHEVLFNSTETETET--ETEATT------NAAVTS--- 707
Query: 644 MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
E + KA+ N + K ++ W D+GGL++ K +L+T++ P + +F++
Sbjct: 708 ---EHIEKALAGYTPSNLRGVKLQK-SSINWSDIGGLKEAKNILLETLEWPTKYAPIFAN 763
Query: 704 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
LR RSG+LLYG PG GKTLLA A+A +C LNF+S+KGPE++N YIG SE++VR++F++
Sbjct: 764 CPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFER 823
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
A++A+PC++FFDE DS+AP RG DS GV DRVV+QML ++DG + ++++ A++R
Sbjct: 824 AQAAKPCILFFDEFDSIAPKRGH--DSTGVTDRVVNQMLTQMDGA-EGLDGVYVLAATSR 880
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDV-SYRER--VLKALTRKFKLLEDVSLYSIAKKCPP 879
PDLID ALLRPGR DK V D+ +Y +R +L+++T K L +DV+L+ IA+K
Sbjct: 881 PDLIDSALLRPGRLDK----SVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTT- 935
Query: 880 NFTGADMYALCADAWFHA 897
F+GADM L +A+ A
Sbjct: 936 GFSGADMQGLGYNAYLKA 953
Score = 52 (23.4 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 920 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQF 953
V++ +++F++ L+E PS+S +E K + +F
Sbjct: 1034 VLITHENFLESLKETKPSISHSEKIKLTKIYKEF 1067
Score = 52 (23.4 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGI---HVVEY-SCHNLMASSERKTSAA-LAQAFNTAQSY 455
L++G G GK +++ VA++L + +Y SC +M + + S + T
Sbjct: 495 LVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWN 554
Query: 456 SPTILLLRDFD 466
P++L+L + D
Sbjct: 555 KPSVLILDNID 565
Score = 41 (19.5 bits), Expect = 4.5e-54, Sum P(3) = 4.5e-54
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 427 EYSCHNLMASSERKTSAALAQAF-----NTAQSYSPTILLLRDFDVFRNLVSNESLPNDQ 481
EY +++ KTS QA N S + L + + LV +S P+
Sbjct: 260 EYVAVSVIPGPNDKTSTKALQATEDDNNNNNNSNNNNKNLKENKRIIAKLVDYKSGPSGN 319
Query: 482 VGLSSEVA 489
+GLS +A
Sbjct: 320 IGLSRNLA 327
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 583 (210.3 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 129/318 (40%), Positives = 206/318 (64%)
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
D++ +T G++P DL L +D + + +++E + E++ T N+++ +
Sbjct: 660 DLVSETEGYLPNDLKIL-SDRIYHEVLFNSTETETET--ETEATT------NAAVTS--- 707
Query: 644 MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
E + KA+ N + K ++ W D+GGL++ K +L+T++ P + +F++
Sbjct: 708 ---EHIEKALAGYTPSNLRGVKLQK-SSINWSDIGGLKEAKNILLETLEWPTKYAPIFAN 763
Query: 704 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
LR RSG+LLYG PG GKTLLA A+A +C LNF+S+KGPE++N YIG SE++VR++F++
Sbjct: 764 CPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFER 823
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
A++A+PC++FFDE DS+AP RG DS GV DRVV+QML ++DG + ++++ A++R
Sbjct: 824 AQAAKPCILFFDEFDSIAPKRGH--DSTGVTDRVVNQMLTQMDGA-EGLDGVYVLAATSR 880
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDV-SYRER--VLKALTRKFKLLEDVSLYSIAKKCPP 879
PDLID ALLRPGR DK V D+ +Y +R +L+++T K L +DV+L+ IA+K
Sbjct: 881 PDLIDSALLRPGRLDK----SVICDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTT- 935
Query: 880 NFTGADMYALCADAWFHA 897
F+GADM L +A+ A
Sbjct: 936 GFSGADMQGLGYNAYLKA 953
Score = 52 (23.4 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 920 VVVEYDDFVKVLRELSPSLSMAELKKYELLRDQF 953
V++ +++F++ L+E PS+S +E K + +F
Sbjct: 1034 VLITHENFLESLKETKPSISHSEKIKLTKIYKEF 1067
Score = 52 (23.4 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGI---HVVEY-SCHNLMASSERKTSAA-LAQAFNTAQSY 455
L++G G GK +++ VA++L + +Y SC +M + + S + T
Sbjct: 495 LVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCAWN 554
Query: 456 SPTILLLRDFD 466
P++L+L + D
Sbjct: 555 KPSVLILDNID 565
Score = 41 (19.5 bits), Expect = 4.5e-54, Sum P(3) = 4.5e-54
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 427 EYSCHNLMASSERKTSAALAQAF-----NTAQSYSPTILLLRDFDVFRNLVSNESLPNDQ 481
EY +++ KTS QA N S + L + + LV +S P+
Sbjct: 260 EYVAVSVIPGPNDKTSTKALQATEDDNNNNNNSNNNNKNLKENKRIIAKLVDYKSGPSGN 319
Query: 482 VGLSSEVA 489
+GLS +A
Sbjct: 320 IGLSRNLA 327
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 534 (193.0 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 112/282 (39%), Positives = 178/282 (63%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
PNV+W D+GG +++ ++ ++ PLLH D F G++ G+L++GPPG KT++AKA+
Sbjct: 530 PNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKAL 589
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG-ASG 787
ATE LNFLS+KGPEL +M++GESE+ VR++F+KAR P ++FFDE+D++ R G
Sbjct: 590 ATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDG 649
Query: 788 DSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
S G V +RV++Q+L E+DG+ ++ Q++ I+ A+NRPD+ID ALLRPGR D++LYVG+
Sbjct: 650 SSSGSSVKERVLTQLLTELDGV-EALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLP 708
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXX 905
+ RE +LK R + DV + + + ++GA++ A+C +A A ++
Sbjct: 709 QCEARRE-ILKIKLRAMPISNDVDMEKLVQ-LTEGYSGAEIQAVCHEAALRALEQSF--- 763
Query: 906 XXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
+A+ V ++ DF L+ + P S LK YE
Sbjct: 764 ----------EAEDV--KWTDFEHALKAVPPRTSPELLKLYE 793
Score = 184 (69.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 59/234 (25%), Positives = 120/234 (51%)
Query: 677 VGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKA---VATECS 733
+GGL+ + + ++++ L + L +GLR G+LLYG G GK+++ +A VA E S
Sbjct: 274 IGGLDRQLQLVEESMEYALGFRTL-PAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERS 332
Query: 734 ---LNFLSVKGPELINMYIGESEKNVRDIFQKARS--ARPCVIFFDELDSLAPARGASGD 788
+ + + E+ + ++GE+E+ + IF++A + P ++ +++ +L P + +
Sbjct: 333 QGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQ----E 388
Query: 789 SGGVMDRVVSQMLAEIDGLNDSSQ----DLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 844
+ ++ RV L+ +D L+ SQ F++ S++ D + P++ R GR D + +G
Sbjct: 389 NSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGA 448
Query: 845 NSDVSYRERVLKALTRKFK-LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
S + R +++ L + + L D + +A + GAD+ L A A
Sbjct: 449 PSSQA-RLEIVRCLIKSVEHQLSDEEVEHVAS-ITHGYVGADLANLVYAAMLQA 500
Score = 95 (38.5 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 51/218 (23%), Positives = 94/218 (43%)
Query: 394 LKFRVAVLLHGLPGCGKRTVVRYVA-----RRLG-IHVVEYSCHNLMASSERKTSAALAQ 447
L+ +LL+G GCGK V+ + R G + ++ + + + +T L
Sbjct: 301 LRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGA 360
Query: 448 AFNTAQSY--SPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDE 505
F A ++ PT+LL+ D NL + + +S S++ + + PS
Sbjct: 361 IFERAYNHYPHPTLLLIEDV---HNLCPKQENSDLVKRVSLAFLSLLDQLSSPS------ 411
Query: 506 ESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLS 563
+ G + ++A + + L P+IRR +E+ +G + Q R+E++
Sbjct: 412 QLKG------------SKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVR 459
Query: 564 QLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALV 601
L++ V SD EE V+ + T G++ DL LV
Sbjct: 460 CLIKSVEHQLSD---EE-VEHVASITHGYVGADLANLV 493
Score = 40 (19.1 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 103 LKQLSVT-SGSLVLVKNA--ETTKQRIAQVVVLDPPTTRKQ 140
LK L + LV V + + I Q VVL+ P+T +Q
Sbjct: 73 LKDLPTKYANMLVFVSEGAMQLAQLHIGQHVVLEAPSTAEQ 113
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 582 (209.9 bits), Expect = 1.7e-54, P = 1.7e-54
Identities = 160/449 (35%), Positives = 249/449 (55%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
VL++ + + +RR F +EIS+G E R ++L ++ + L D ++
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICKV--NLAGDVTLKQI 428
Query: 582 VK---DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKN---EPGESDLTAKVA--HN 633
K +G + R+ + D + I N E KN E + +L +A
Sbjct: 429 AKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKN-EGHKNLTVEQIKEELDRVLAWLQG 487
Query: 634 DNSSIAATQVMGK-----EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSIL 688
D+ A +++ G ED +A+ + A G VP+V W+D+G L +V+K +
Sbjct: 488 DDDPSALSELNGGLQISFEDFERALSTIQPA-AKREGFATVPDVSWDDIGALVEVRKQLE 546
Query: 689 DTVQLPLLHKDLFSS-GLRKR-SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN 746
++ P+ D F++ G+ R G+LL GPPG GKTLLAKAVA E +NF+SVKGPEL+N
Sbjct: 547 WSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLN 606
Query: 747 MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG 806
MY+GESE+ VR +FQ+AR ++PCVIFFDE+D+L P R SGG R+V+Q+L E+DG
Sbjct: 607 MYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGA--RLVNQLLTEMDG 664
Query: 807 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFK 863
+ + Q +F+IGA+NRPD++D A+LRPGR DK+L+V S V R +L+ T+ +
Sbjct: 665 V-EGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPS-VEDRVDILRKSTKNGTRPM 722
Query: 864 LLEDVSLYSIAKKCPP--NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVV 921
L ED+ + IA+ P FTGAD+ AL ++ A + +VL + V
Sbjct: 723 LGEDIDFHEIAQ-LPELAGFTGADLAALIHESSLLALQARVLEND--------ESVKGVG 773
Query: 922 VEYDDFVKVLRELSPSLSMAELKKYELLR 950
+ + F + + PS++ A+ KKYE ++
Sbjct: 774 MRH--FREAASRIRPSVTEADRKKYEHMK 800
Score = 213 (80.0 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 603 DAGANLIRKSNSEVDKNEPGESDL---TAKVAHNDNSSIAATQVMGKEDLVKAMERSKKR 659
+ A + K + N ++ L T K A + S Q K A + R
Sbjct: 128 ERAARQLEKQIESLKTNRANKTVLNLYTKKSAPSTPVSTPKNQATKKPPGASAAPPALPR 187
Query: 660 NASALG---APKVPNVKWEDVGGLEDVKKSILDTVQLPLLHK--DLFSS-GLRKRSGVLL 713
A+ +P+ +VK+E +GG + + L+ +L + K F++ G+ G ++
Sbjct: 188 GLGAVSDTISPRESHVKFEHIGGAD---RQFLEVCRLAMHLKRPKTFATLGVDPPRGFIV 244
Query: 714 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 773
+GPPG GKT+ A+AVA E ++ L + EL++ GE+E+ +R +F A+ PC++
Sbjct: 245 HGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILIL 304
Query: 774 DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 807
D++D++AP R + + RVVSQ+ + +D L
Sbjct: 305 DDIDAIAPRRETAQRE--MERRVVSQLCSSLDEL 336
Score = 204 (76.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 84/329 (25%), Positives = 149/329 (45%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTIL 460
++HG PGCGK + VA L I +++ + L++ +T + + F+TA+ SP IL
Sbjct: 243 IVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCIL 302
Query: 461 LLRDFDVF--RNLVSNESLPNDQVGLSSEVASVIREFTEPSAED--EDEESHG----YFP 512
+L D D R + + V S++ S + E P E +D+ + G
Sbjct: 303 ILDDIDAIAPRRETAQREMERRVV---SQLCSSLDELVLPPREKPLKDQLTFGDDGSVAI 359
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVS 570
+ + VL++ + + +RR F +EIS+G E R ++L ++ +
Sbjct: 360 IGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICKV-- 417
Query: 571 ELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLI-RKSNSEVDKNEPGESDLTAK 629
L D +K I T G++ DL AL+ +A I R ++ V KNE G +LT +
Sbjct: 418 NLAGDVT----LKQIAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNE-GHKNLTVE 472
Query: 630 ---------VA--HNDNSSIAATQVMGKEDL-VKAMERSKKRNASAL---GAPKVPNVKW 674
+A D+ A +++ G + + ER+ A G VP+V W
Sbjct: 473 QIKEELDRVLAWLQGDDDPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSW 532
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
+D+G L +V+K + ++ P+ D F++
Sbjct: 533 DDIGALVEVRKQLEWSILYPIKRADDFAA 561
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 582 (209.9 bits), Expect = 1.7e-54, P = 1.7e-54
Identities = 160/449 (35%), Positives = 249/449 (55%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
VL++ + + +RR F +EIS+G E R ++L ++ + L D ++
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICKV--NLAGDVTLKQI 428
Query: 582 VK---DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKN---EPGESDLTAKVA--HN 633
K +G + R+ + D + I N E KN E + +L +A
Sbjct: 429 AKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKN-EGHKNLTVEQIKEELDRVLAWLQG 487
Query: 634 DNSSIAATQVMGK-----EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSIL 688
D+ A +++ G ED +A+ + A G VP+V W+D+G L +V+K +
Sbjct: 488 DDDPSALSELNGGLQISFEDFERALSTIQPA-AKREGFATVPDVSWDDIGALVEVRKQLE 546
Query: 689 DTVQLPLLHKDLFSS-GLRKR-SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN 746
++ P+ D F++ G+ R G+LL GPPG GKTLLAKAVA E +NF+SVKGPEL+N
Sbjct: 547 WSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLN 606
Query: 747 MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG 806
MY+GESE+ VR +FQ+AR ++PCVIFFDE+D+L P R SGG R+V+Q+L E+DG
Sbjct: 607 MYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGA--RLVNQLLTEMDG 664
Query: 807 LNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR---KFK 863
+ + Q +F+IGA+NRPD++D A+LRPGR DK+L+V S V R +L+ T+ +
Sbjct: 665 V-EGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPS-VEDRVDILRKSTKNGTRPM 722
Query: 864 LLEDVSLYSIAKKCPP--NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVV 921
L ED+ + IA+ P FTGAD+ AL ++ A + +VL + V
Sbjct: 723 LGEDIDFHEIAQ-LPELAGFTGADLAALIHESSLLALQARVLEND--------ESVKGVG 773
Query: 922 VEYDDFVKVLRELSPSLSMAELKKYELLR 950
+ + F + + PS++ A+ KKYE ++
Sbjct: 774 MRH--FREAASRIRPSVTEADRKKYEHMK 800
Score = 213 (80.0 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 603 DAGANLIRKSNSEVDKNEPGESDL---TAKVAHNDNSSIAATQVMGKEDLVKAMERSKKR 659
+ A + K + N ++ L T K A + S Q K A + R
Sbjct: 128 ERAARQLEKQIESLKTNRANKTVLNLYTKKSAPSTPVSTPKNQATKKPPGASAAPPALPR 187
Query: 660 NASALG---APKVPNVKWEDVGGLEDVKKSILDTVQLPLLHK--DLFSS-GLRKRSGVLL 713
A+ +P+ +VK+E +GG + + L+ +L + K F++ G+ G ++
Sbjct: 188 GLGAVSDTISPRESHVKFEHIGGAD---RQFLEVCRLAMHLKRPKTFATLGVDPPRGFIV 244
Query: 714 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 773
+GPPG GKT+ A+AVA E ++ L + EL++ GE+E+ +R +F A+ PC++
Sbjct: 245 HGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILIL 304
Query: 774 DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 807
D++D++AP R + + RVVSQ+ + +D L
Sbjct: 305 DDIDAIAPRRETAQRE--MERRVVSQLCSSLDEL 336
Score = 204 (76.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 84/329 (25%), Positives = 149/329 (45%)
Query: 401 LLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTIL 460
++HG PGCGK + VA L I +++ + L++ +T + + F+TA+ SP IL
Sbjct: 243 IVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCIL 302
Query: 461 LLRDFDVF--RNLVSNESLPNDQVGLSSEVASVIREFTEPSAED--EDEESHG----YFP 512
+L D D R + + V S++ S + E P E +D+ + G
Sbjct: 303 ILDDIDAIAPRRETAQREMERRVV---SQLCSSLDELVLPPREKPLKDQLTFGDDGSVAI 359
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVS 570
+ + VL++ + + +RR F +EIS+G E R ++L ++ +
Sbjct: 360 IGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICKV-- 417
Query: 571 ELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLI-RKSNSEVDKNEPGESDLTAK 629
L D +K I T G++ DL AL+ +A I R ++ V KNE G +LT +
Sbjct: 418 NLAGDVT----LKQIAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNE-GHKNLTVE 472
Query: 630 ---------VA--HNDNSSIAATQVMGKEDL-VKAMERSKKRNASAL---GAPKVPNVKW 674
+A D+ A +++ G + + ER+ A G VP+V W
Sbjct: 473 QIKEELDRVLAWLQGDDDPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSW 532
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
+D+G L +V+K + ++ P+ D F++
Sbjct: 533 DDIGALVEVRKQLEWSILYPIKRADDFAA 561
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 496 (179.7 bits), Expect = 3.0e-54, Sum P(3) = 3.0e-54
Identities = 125/340 (36%), Positives = 189/340 (55%)
Query: 635 NSSIAATQVM-GKEDLVKAMERSKKRN-ASALGAPKVPNVKWEDVGGLEDVKKSILDTVQ 692
+SS+ + +V+ D +A ++ + + SA+G + + WE +GGLEDVK + +V+
Sbjct: 421 HSSLDSAEVLINMADFQEAFKKIQPSSFRSAIGLKECKPITWEQIGGLEDVKLKLKQSVE 480
Query: 693 LPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGE 751
P+ F+ GL + GVLLYGP G KT L KAVAT C +FLSV G EL + Y+G+
Sbjct: 481 WPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGD 540
Query: 752 SEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN--- 808
SEK + +F++AR+ P +IF DE+DS+ +R S GV +RV+S +L E+DG+
Sbjct: 541 SEKILSQVFRQARANTPAIIFLDEIDSILGSRSHSKSGHGVSERVLSVLLNELDGVGLKV 600
Query: 809 ----------------DSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
S+D ++ A+NRPD++D ALLRPGR D+++Y+ D+ R
Sbjct: 601 TERRGNKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRPGRLDRVIYIPP-PDLKGRL 659
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXX 912
+LK T K L DVSL IA + F+GAD+ LC +A A + L
Sbjct: 660 SILKICTEKIPLDTDVSLQDIAARTDL-FSGADIENLCKEAALLALQENGL--------- 709
Query: 913 RIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQ 952
++ V++ FVK L+ + PSLSM +L+ YE + Q
Sbjct: 710 -----EATAVKHGHFVKSLQTVKPSLSMKDLEFYEKIYSQ 744
Score = 420 (152.9 bits), Expect = 4.5e-36, P = 4.5e-36
Identities = 100/265 (37%), Positives = 150/265 (56%)
Query: 677 VGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 735
V GL+DV +S+ + V LP F GL +GVLL GPPG GKTLL KAVA E
Sbjct: 199 VAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAY 258
Query: 736 FLSVKGPELINMYIGESEKNVRDIFQKARSAR---PCVIFFDELDSLAPARGASGDSGGV 792
L + GP L GESE+N+R +F+K R P V+F DE+D+L P RG+S +
Sbjct: 259 LLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPE- 317
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
DR+V+Q+L +DG+ + + ++ A+NRPD +DPAL RPGRFD+ + +G + ++ R
Sbjct: 318 -DRLVAQLLTLLDGVGRKDR-MVVVAATNRPDALDPALRRPGRFDREVIIGTPT-LTQRR 374
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXX 912
+L+ LT + D+ L +A+ + GAD+ ALC +A A + V
Sbjct: 375 SILQMLTCSMPISTDIDLVKLAEMTT-GYVGADLTALCREA----AMQAVFHSS------ 423
Query: 913 RIDQADSVVVEYDDFVKVLRELSPS 937
+D A+ V++ DF + +++ PS
Sbjct: 424 -LDSAE-VLINMADFQEAFKKIQPS 446
Score = 90 (36.7 bits), Expect = 3.0e-54, Sum P(3) = 3.0e-54
Identities = 42/172 (24%), Positives = 76/172 (44%)
Query: 321 IIYFKVVAVEPSEETVLRVNCTKTALVLGGSIPSALPPDLLISGSNDFVPLQG--DTVKI 378
+++ ++++V+P E + +T++ + I L L++ +P+ G D +
Sbjct: 152 VLHVEILSVDPVTEEAGLIT-PQTSVTIKEVI--TLERYRLLTEDTAKIPVAGLDDVGES 208
Query: 379 LASIL-APTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLM 434
L ++ P P L L VLL G PG GK +V+ VAR G +++ S L
Sbjct: 209 LKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPALY 268
Query: 435 ASSERKTSAALAQAFNTAQSYS---PTILLLRDFDVF-RNLVSNESLPNDQV 482
S ++ L F + S PT+L + + D S+ S P D++
Sbjct: 269 GSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPEDRL 320
Score = 82 (33.9 bits), Expect = 3.0e-54, Sum P(3) = 3.0e-54
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 521 RQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGS 578
+ ++++VAA + + L P +RR F E+ +G T QR +L Q+L +++D
Sbjct: 334 KDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSIL-QMLTCSMPISTDI-- 390
Query: 579 EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE 620
+ VK + T+G++ DL AL +A + +S +D E
Sbjct: 391 -DLVK-LAEMTTGYVGADLTALCREAAMQAV--FHSSLDSAE 428
Score = 41 (19.5 bits), Expect = 1.9e-44, Sum P(2) = 1.9e-44
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 599 ALVADAGANLIRKSNSEVDKNEPGESD 625
A+ +AGA L+ S + + PGES+
Sbjct: 250 AVAREAGAYLLCISGPALYGSRPGESE 276
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 547 (197.6 bits), Expect = 6.6e-54, Sum P(2) = 6.6e-54
Identities = 118/224 (52%), Positives = 156/224 (69%)
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
E +GGL + ++ ++D + LP + LFSS LR+ SGVLLYG PGTGKTLLA AVA E
Sbjct: 796 ERIGGLHEARQLLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESG 855
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVM 793
+NF+S+KGPEL++ YIG SE+ VRD+FQ+A+ A+PC++FFDE DSLAP RG D+ GV
Sbjct: 856 MNFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFFDEFDSLAPRRGH--DNTGVT 913
Query: 794 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 853
DRVV+Q+L ++DG+ + ++++ AS+RPDLIDPALLRPGR DK LY D + R
Sbjct: 914 DRVVNQLLTQLDGV-EGLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPP-PDRAARLE 971
Query: 854 VLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
+L+ALT L DV L IA FTGAD+ AL +A A
Sbjct: 972 ILRALTHSVPLAADVDLDQIAG-ATELFTGADLKALLYNAQLEA 1014
Score = 135 (52.6 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 87/378 (23%), Positives = 157/378 (41%)
Query: 548 ISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGAN 607
+ + PL R+ + ++QP+ L E+ + + L L + N
Sbjct: 392 VRIQPLKSMPRLAE-TVMVQPLQPLAESEKEEDIQMAFLNWLHAQSHQPLTCLTGRS--N 448
Query: 608 LIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME--RSKKRNAS--- 662
+I +E K E + L + D + ++ K D+ A E S R +
Sbjct: 449 IILLPCAE-GKEEFALTVLKPEQQQEDELFFLSNSLLRKTDIQIAREPHNSDHRGSDNDT 507
Query: 663 ---ALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLL----HKDLFSSGLRKRSGVLLY- 714
LG P + ++ GG+ED+ +S + LL ++L S+G R G LL
Sbjct: 508 EDQCLGFPSLSSL-----GGVEDISRSAFQHISHALLGGSLSRELISTGRGLRGGALLIT 562
Query: 715 GPPGTGKTLLAKAVATECS------LNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 768
G G+GK+ L++A+ + S + L K L + + D+F++A +P
Sbjct: 563 GAKGSGKSSLSRALCRKASEDLDAHIQLLDCK--TLKGKRTDTIRQRLEDVFEQAVWRQP 620
Query: 769 CVIFFDELDSLAPARGASGDSGG---VMDRVVSQMLAE-IDGLNDSSQDLFIIGASNRPD 824
V+ D+LD +A A + G V+ + +SQ L + +D + S + +I +
Sbjct: 621 SVVLLDDLDHVAGAATSPEHEHGPEAVLRQHISQSLKDLVDEIVLRSSLIALIVTAQTEH 680
Query: 825 LIDPAL--LRPGRFDKLLYVGVNSDVSYRERVLKALTRK--FKLLED-VSLYSIAKKCPP 879
+ P L ++ F + D + R +LK+L K F++ + + L S+AK+
Sbjct: 681 ALHPTLTVVQGSHFFQSFCKIPTPDQAQRVEILKSLIVKKSFQVCQTTLDLDSVAKETE- 739
Query: 880 NFTGADMYALCADAWFHA 897
F D+ L A HA
Sbjct: 740 GFMARDLNLLLERA-IHA 756
Score = 93 (37.8 bits), Expect = 6.6e-54, Sum P(2) = 6.6e-54
Identities = 57/223 (25%), Positives = 88/223 (39%)
Query: 399 AVLLHGLPGCGKRTVVRYVARR----LGIHVVEYSCHNLMASSERKTSAALAQAFNTAQS 454
A+L+ G G GK ++ R + R+ L H+ C L L F A
Sbjct: 558 ALLITGAKGSGKSSLSRALCRKASEDLDAHIQLLDCKTLKGKRTDTIRQRLEDVFEQAVW 617
Query: 455 YSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFPVK 514
P+++LL D D ++ + P + G + V+R+ S +D V
Sbjct: 618 RQPSVVLLDDLD---HVAGAATSPEHEHGPEA----VLRQHISQSLKDL---------VD 661
Query: 515 EIEKICRQQVLLVAAADSSEGLPP-TIRRC--FSHEISMGPLTEQ-QRVEMLSQLLQPVS 570
EI L+V A P T+ + F P +Q QRVE+L L+ S
Sbjct: 662 EIVLRSSLIALIVTAQTEHALHPTLTVVQGSHFFQSFCKIPTPDQAQRVEILKSLIVKKS 721
Query: 571 ELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADA-GANLIRKS 612
T + + + +T GFM RDL+ L+ A AN + S
Sbjct: 722 FQVCQTTLD--LDSVAKETEGFMARDLNLLLERAIHANTLHNS 762
Score = 66 (28.3 bits), Expect = 4.6e-51, Sum P(2) = 4.6e-51
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 567 QPVSELTSDTGSEEFVKDIIGQTSGFMPRDL-HALVADAGANLIRKSNSEVDKNEPGESD 625
+P E + +KD I +T G PR + H +++ + E + PG+S
Sbjct: 240 EPAKEKIAVPTIPAILKDCILRTCGSPPRSVSHHGSCHGDVHILPWNLQEQENWNPGQSA 299
Query: 626 LTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNAS 662
LT + S I + + + +E + +AME+ K R+AS
Sbjct: 300 LT----YGRLSKILSPKEL-REKVKQAMEKKKIRDAS 331
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 582 (209.9 bits), Expect = 8.9e-53, Sum P(2) = 8.9e-53
Identities = 142/390 (36%), Positives = 222/390 (56%)
Query: 530 ADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF--VKDIIG 587
A S+ L + +SMG L L L P L S G F ++ I
Sbjct: 682 AVQSQRLAHALNNMIKEFVSMGSLVALIATSQLQHSLHP--SLVSAQGVHTFQCIQHIQP 739
Query: 588 QTSGFMPRDLHALVADA-GANLIRKSNSE---VDKNEPG--ESDLTAKVAHNDNSSIAAT 641
LH++V + G ++ + + + + K D T V +SS++
Sbjct: 740 PDQEQRCEILHSVVKNKLGCDISKSPDLDLKCIAKETEAFVARDFTVLVDRAIHSSLSRQ 799
Query: 642 QVMGKE-------DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLP 694
Q +E D KA+ + + K ++ W+ +GGL +V++ ++DT+QLP
Sbjct: 800 QNPTREGLTLTTADFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLP 859
Query: 695 LLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE 753
+ +LF++ +R+R+G+LLYGPPGTGKTLLA VA E +NF+S++GPEL++ YIG SE
Sbjct: 860 AKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIQGPELLSKYIGASE 919
Query: 754 KNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD 813
+ VRD+F +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+ + Q
Sbjct: 920 QAVRDVFIRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLQG 976
Query: 814 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 873
++++ A++RPDLIDPALLRPGR DK +Y VS R +L L++ L +DV L +
Sbjct: 977 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVS-RLEILTVLSKSLPLADDVDLQHV 1035
Query: 874 AKKCPPNFTGADMYALCADAWFHAAKRKVL 903
A +FTGAD+ AL +A A + ++L
Sbjct: 1036 AS-VTESFTGADLKALLYNAQLEALQGRLL 1064
Score = 45 (20.9 bits), Expect = 8.9e-53, Sum P(2) = 8.9e-53
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 112 SLVLVKNAETTKQRIAQVVVLDPPTTRK---QVCDGDVHSKHSSPTMLTFPSIHL 163
SL +V + E K++ V VL P +K QV + +HS + PS+ L
Sbjct: 499 SLSIVHSQEKEKEQGRTVFVLSPILLQKISVQVLLEPMIGEHSEEIDILLPSLTL 553
Score = 37 (18.1 bits), Expect = 6.2e-52, Sum P(2) = 6.2e-52
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 447 QAFNTAQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEP 498
QA + PT L + F + N + N QVG ++S + F P
Sbjct: 45 QAIEVTGDHQPTYLSWVEGRHFNDQSENVAEINRQVGQKLGLSSGDQVFLRP 96
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 567 (204.7 bits), Expect = 9.3e-53, Sum P(3) = 9.3e-53
Identities = 134/320 (41%), Positives = 196/320 (61%)
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
DI G+T G+MP DL LV A + +S E TA+ H + +
Sbjct: 779 DIAGRTDGYMPGDLLLLVTRARNAALSRSLEE-----------TAEDDHLNALGVP---- 823
Query: 644 MGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS 703
+G +D +A++ + + +K++ +GGL + ++ +L+T+Q P + +F+
Sbjct: 824 LGMQDFDEALKGFTPASLHNVSLQS-STIKFDSIGGLSETRRVLLETLQYPTKYAPIFAQ 882
Query: 704 -GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQK 762
LR RSG+LLYG PG GKTLLA AVA EC LNF+SVKGPE++N YIG SEK+VRD+F++
Sbjct: 883 CPLRLRSGLLLYGYPGCGKTLLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFER 942
Query: 763 ARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
A +A+PCV+FFDE DS+AP RG DS GV DRVV+Q+L ++DG S ++++ A++R
Sbjct: 943 ASAAKPCVLFFDEFDSIAPKRGH--DSTGVTDRVVNQLLTQMDGAEGLS-GVYVLAATSR 999
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDV-----SLYSIAKKC 877
PDLIDPALLRPGR DK L + R +++AL K K+ E+V L +A++
Sbjct: 1000 PDLIDPALLRPGRLDKSLICDF-PNAEDRLDIIRALASKVKVGEEVLANEAELLELARRT 1058
Query: 878 PPNFTGADMYALCADAWFHA 897
FTGAD+ AL +++ A
Sbjct: 1059 E-GFTGADLQALMSNSQLEA 1077
Score = 54 (24.1 bits), Expect = 9.3e-53, Sum P(3) = 9.3e-53
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 399 AVLLHGLPGCGKRTVVRYVARRLG----IHVVEYSCHNLMASSERKTSA--ALAQAF-NT 451
+VLL G G GK +V + +A L H ++C +L R + L + F N
Sbjct: 555 SVLLTGALGSGKTSVGKSIANALKRDSFYHTTYFTCRSLTNDESRVATVRETLNRLFMNA 614
Query: 452 ---AQSYSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTEP-SAED 502
A+ I++L D D + + ND G S +++ + + AED
Sbjct: 615 SWGARLGGKAIVILDDLDKLCPAETELQVGNDN-GRSRQISEALCAIVKQYCAED 668
Score = 50 (22.7 bits), Expect = 9.3e-53, Sum P(3) = 9.3e-53
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 917 ADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQF 953
A VV+ + K L E PS+S E + E + +F
Sbjct: 1190 AGEVVIGWSHITKALDETRPSISSEERARLERIYREF 1226
Score = 39 (18.8 bits), Expect = 3.4e-51, Sum P(3) = 3.4e-51
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 23 IDSMVERRKPLVLSSTKLLINSVLSSSRRVTGENL 57
IDS+++ K + + +L+ L S + G+++
Sbjct: 539 IDSLLKELKSHLTHLSSVLLTGALGSGKTSVGKSI 573
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 530 (191.6 bits), Expect = 1.0e-52, Sum P(2) = 1.0e-52
Identities = 129/390 (33%), Positives = 215/390 (55%)
Query: 524 VLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQ--PVSELTSDTGSE 579
++++AA + + +RR EI + +QQR+++L P+S S+ +
Sbjct: 430 LIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNL-LD 488
Query: 580 EFVKDIIGQTSG---FMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNS 636
+ + +G F+ RD A +A + NL++ N+E ++NE + L ++
Sbjct: 489 QIADETVGYVGANIQFLCRD-SAFIAFSKYNLLKYQNNEQNENENEKKYLIEIEDFRESI 547
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLL 696
++ E LV+ + NV W+D+GGL+D+K+ + ++ P L
Sbjct: 548 KNNPASILKGEHLVE----------------NISNVSWDDIGGLDDIKEELRQAIEWPNL 591
Query: 697 HKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 755
+K+ F GL G++LYGPPG KT L KAVA+ L+FLS+ G + + Y+G+SE+
Sbjct: 592 YKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSEQT 651
Query: 756 VRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQD 813
+RDIF+KAR P ++FFDE+D++ R S +S G RV+S L E+DG+ +
Sbjct: 652 IRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGV-EQLNG 710
Query: 814 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 873
+ +IGA+NR D+ID ALLRPGRFDK+L + + +S R ++LK T+ L ++V+L I
Sbjct: 711 VIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLS-RLKILKIKTKSIPLSDNVNLIEI 769
Query: 874 AKKCPPNFTGADMYALCADAWFHAAKRKVL 903
+ F+GAD+ LC +A F + +R +L
Sbjct: 770 SN-LTNGFSGADLENLCREASFQSLRRDLL 798
Score = 323 (118.8 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 87/275 (31%), Positives = 139/275 (50%)
Query: 677 VGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 735
+GGL + K + + + P+L +F + + G+LL GPPGTGKT L + V +
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 736 FLSVKGPELINMYIGESEKNVRDIFQKA------RSARPCVIFFDELDSLAPARGASGDS 789
+S+ ++ YIGE+E+N+R+IFQ+A +S P V+F DE+D++ P R S +
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQN 408
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
RVV Q L +DG+ +L II A+NRP+ ID AL RPGR D+ + + V +
Sbjct: 409 ES---RVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNK-Q 464
Query: 850 YRERVLKALTRKFKLLEDVS--LYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXX 907
R +LK K + S L IA + + GA++ LC D+ F A + L
Sbjct: 465 QRLDILKLYCSKLPISPTPSNLLDQIADETV-GYVGANIQFLCRDSAFIAFSKYNLLKYQ 523
Query: 908 XXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAE 942
+ ++E +DF + ++ S+ E
Sbjct: 524 NNEQNENENEKKYLIEIEDFRESIKNNPASILKGE 558
Score = 87 (35.7 bits), Expect = 1.0e-52, Sum P(2) = 1.0e-52
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 362 ISGSNDF-VPLQGDTVKILASILA-PTLCPSV---LSLKFRVAVLLHGLPGCGKRTVVRY 416
++ +N+F + + +K+L ++ P L P V L++ +LL G PG GK +VR
Sbjct: 281 LNNNNNFKIGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRT 340
Query: 417 VARRLGIHVVEYSCHNLMASSERKTSAALAQAF------NTAQSYSPTILLLRDFD 466
V I ++ C + S +T L F + A+S SP ++ + + D
Sbjct: 341 VCDAYDIEMISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEID 396
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 577 (208.2 bits), Expect = 1.2e-52, P = 1.2e-52
Identities = 146/390 (37%), Positives = 219/390 (56%)
Query: 530 ADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF--VKDIIG 587
A S+ L + ISMG L L P+ L S G F V+ I
Sbjct: 681 AIQSQRLAHALNDLVKEFISMGSLVALIATSQSQHSLHPL--LVSAQGIHIFQCVQHIQP 738
Query: 588 QTSGFMPRDLHALVADA-GANLIRKSNSEVD---KNEPG--ESDLTAKVAHNDNSSIAAT 641
LHA++ + ++ R + ++ K G D T V +S ++
Sbjct: 739 PDQDQRCEILHAIIKNKLDCDMKRFTGLDLQRIAKETEGFVARDFTMLVDRAIHSHLSHQ 798
Query: 642 QVMGKEDLV-------KAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLP 694
V +E+LV KA+ + + K ++ W+ +GGL DV++ ++DT+QLP
Sbjct: 799 NVYTREELVLTTLDFQKALRGFTPVSLRNVNLHKPRDLGWDRIGGLHDVRQILVDTIQLP 858
Query: 695 LLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE 753
+ +LF++ +R+R+GVLLYGPPGTGKTLLA +A E +NF+SVKGPEL++ YIG SE
Sbjct: 859 AKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASE 918
Query: 754 KNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD 813
+ VRD+F +A++A+PC++FFDE +S+AP RG D+ GV DRVV+Q+L ++DG+ + Q
Sbjct: 919 QAVRDVFVRAQAAKPCILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGV-EGLQG 975
Query: 814 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 873
++++ A++RPDLIDPALLRPGR DK +Y S R +L L+ L +DV L +
Sbjct: 976 VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQAS-RLEILNVLSESLPLADDVDLQHV 1034
Query: 874 AKKCPPNFTGADMYALCADAWFHAAKRKVL 903
A +FTGAD+ AL A A ++L
Sbjct: 1035 AS-LTDSFTGADLKALLYGAQLEALHGRLL 1063
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 509 (184.2 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
Identities = 108/231 (46%), Positives = 154/231 (66%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
++P V W D+GG E++K+ +++ VQLPL D F + G+ GVLLYGPPG KTL AK
Sbjct: 492 EMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAK 551
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A+ATE LNFL+VKGPE+ N Y+GESE+ +R+IF+KAR+A P +IFFDE+D++A R
Sbjct: 552 ALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDR--D 609
Query: 787 GDSGGVM-DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GDS V++ +L EIDG+ + + + I+GA+N+P IDPALLRPGR D+ +YV
Sbjct: 610 GDSSTTAASNVLTSLLNEIDGVEEL-KGVVIVGATNKPTEIDPALLRPGRLDRHIYVAP- 667
Query: 846 SDVSYRERVLKALTRKFKLL---EDVSLYSIAKKCPPNFTGADMYALCADA 893
D R ++L+ +RKF L E V L +A+ +GA++ LC +A
Sbjct: 668 PDYDARLQILQKCSRKFNLQSGDESVDLQKLAE-LTDGCSGAEVTLLCQEA 717
Score = 481 (174.4 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 133/399 (33%), Positives = 218/399 (54%)
Query: 558 RVEMLSQLLQP--VSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
RVE++ + QP S++ S +G EE V + + S + D+ + N+ K +
Sbjct: 112 RVELVKFMNQPQYASDI-SISGVEETVTEDV--RSALL--DIGLVYPGLQINVDNKRITI 166
Query: 616 VDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPN---- 671
VD N+ ++ + K++ D+ S+ + + L +S K PN
Sbjct: 167 VDVNDSLDASMD-KLSIKDSDSLLSVHTVSPPYLFSPTTSINVATSSFPARSKYPNLPQQ 225
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
+ ++ VGGL + + T++LPL + LFS G+ G+LL+GPPGTGKT+L + VA
Sbjct: 226 ITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVAN 285
Query: 731 ECS-LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
+ + L++ GP +++ Y+GE+E +RDIF +A+ +P +IF DE+DS+AP+R S DS
Sbjct: 286 SITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSR-TSDDS 344
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
G RVV+Q+L +DG+ D+ + + +IGA+NRP+ ID AL RPGRFD+ + +G+ DV
Sbjct: 345 GETESRVVAQLLTVMDGMGDNGR-IVVIGATNRPNSIDSALRRPGRFDQEVEIGI-PDVE 402
Query: 850 YRERVL-----KALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLX 904
RE +L K + K ++ ++ + SIA K + GAD+ ALC ++ A R +
Sbjct: 403 AREEILTKQFAKMNSEKCQITKE-EIASIASKTH-GYVGADLTALCRESVMKAINRGLTV 460
Query: 905 XXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
I Q ++ V DD L E+ PS +M E+
Sbjct: 461 G--------IPQT-AIKVTVDDVYHALPEIRPS-AMREI 489
Score = 102 (41.0 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 351 SIPSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAVLLHGLPGCGK 410
++P + D + G + + L T+++ + PTL S + +LLHG PG GK
Sbjct: 221 NLPQQITYDQ-VGGLSKQIELLKSTIEL--PLNNPTLF-SDFGISPPRGILLHGPPGTGK 276
Query: 411 RTVVRYVARRLG-IHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTILLLRDFD 466
++R VA + HV+ + ++++ +T A+ FN A+ + P+I+ + + D
Sbjct: 277 TMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEID 333
Score = 39 (18.8 bits), Expect = 1.9e-52, Sum P(3) = 1.9e-52
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 102 VLKQLSVTSGSLVLVKNAETTKQRIAQVV 130
+L + + +G+LVLV ++++ + V
Sbjct: 55 ILSAMELNNGNLVLVSSSDSGSAGVVATV 83
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 526 (190.2 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 103/237 (43%), Positives = 160/237 (67%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
+VPNV W D+GG E++K I V P H + F G+ +G+LLYGPPG KTL+A+
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIAR 511
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A+A+E +NFL+VKGPEL + ++G+SEK +RD+F +AR P ++FFDE+D++ +RG S
Sbjct: 512 ALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRG-S 570
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
S GV DRV++Q+L E+DGL SS+ + ++ A+NRPD +D ALLRPGR D+ +YVG+
Sbjct: 571 EKSSGVSDRVLAQLLTELDGLEKSSR-VILLAATNRPDQLDSALLRPGRLDRAIYVGLPC 629
Query: 847 DVSYRERVLKALTRKFKLLEDV-SLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 902
+V+ R +L+ T+K K + V ++ + +K ++GA++ A+C A A + +
Sbjct: 630 EVT-RRAILEMRTKKMKFDDTVRTIDKLVEKTS-GYSGAELVAVCRTAAMFAMRESI 684
Score = 57 (25.1 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 399 AVLLHGLPGCGKRTVVRYVARRL-GIHVVEYSCHNLM 434
+VL+ GLPG GK +++ VA L G SC LM
Sbjct: 274 SVLIWGLPGSGKTLLLKEVALVLSGSTTYIGSCEELM 310
Score = 38 (18.4 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 526 LVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQL 565
++ SSE L R F E + T+ +R+++LS++
Sbjct: 350 VILCVRSSETLDIGFRVRFPIEAEITVPTQDERLDILSKI 389
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 543 (196.2 bits), Expect = 2.6e-51, Sum P(4) = 2.6e-51
Identities = 112/243 (46%), Positives = 166/243 (68%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF-SSGLRKRSGVLLYGPPGTGKTLLAK 726
K N+KW D+G L + K +L+T++ P ++ +F + LR RSG+LLYG PG GKTLLA
Sbjct: 690 KETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLAS 749
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA +C LNF+SVKGPE++N +IG SE+N+R++F++A+S +PC++FFDE DS+AP RG
Sbjct: 750 AVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGH- 808
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
DS GV DRVV+Q+L ++DG + ++I+ A++RPDLID ALLRPGR DK + + +
Sbjct: 809 -DSTGVTDRVVNQLLTQMDGA-EGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPT 866
Query: 847 DVSYRERVLKALT---------RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
+ S R +L+A+ +KF L ++ L IA+K F+GAD+ LC +A+ +
Sbjct: 867 E-SERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTA-GFSGADLQGLCYNAYLKS 924
Query: 898 AKR 900
R
Sbjct: 925 VHR 927
Score = 108 (43.1 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 388 CPSVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQ 447
CP L+ R +LL+G PGCGK + VA++ G++ + ++ + + +
Sbjct: 726 CP----LRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRE 781
Query: 448 AFNTAQSYSPTILLLRDFD 466
F AQS P IL +FD
Sbjct: 782 LFERAQSVKPCILFFDEFD 800
Score = 67 (28.6 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 554 TEQQRVEMLSQLLQPVSELTSDTGSEEF-------VKDIIGQTSGFMPRDLHALVADAGA 606
TE +R+++L + V+ DTG ++F +K I +T+GF DL L +A
Sbjct: 866 TESERLDILQAI---VNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYL 922
Query: 607 NLIRKSNSEVDKNE--PGESDL 626
+ + S D++E PG ++
Sbjct: 923 KSVHRWLSAADQSEVVPGNDNI 944
Score = 62 (26.9 bits), Expect = 2.6e-51, Sum P(4) = 2.6e-51
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 919 SVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSSN 958
+ VV +D ++ +E PS+S +EL K + D+F+ N
Sbjct: 985 TAVVTINDLLEACQETKPSISTSELVKLRGIYDRFQKDRN 1024
Score = 49 (22.3 bits), Expect = 2.6e-51, Sum P(4) = 2.6e-51
Identities = 41/208 (19%), Positives = 88/208 (42%)
Query: 399 AVLLHGLPGCGKRTVVRYVARRL--GIHV-VEYS-CHNLMASSER-KTSAALAQAFNTAQ 453
A++L G G GK +++ + + H+ V+Y+ C L +S KT + + +
Sbjct: 456 AIILDGKQGIGKTRLLKELINEVEKDHHIFVKYADCETLHETSNLDKTQKLIMEWCSFCY 515
Query: 454 SYSPTILLLRDFD-VFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEESHGYFP 512
Y P++++L + + +F +N+ P++ G + ++ F + ++++
Sbjct: 516 WYGPSLIVLDNVEALFGKPQANDGDPSNN-GQWDNASKLLNFFINQVTKIFNKDN----- 569
Query: 513 VKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEI-SMGPLTEQQRVEMLSQLLQP--V 569
K I +L + ++ P + F E S+ + R ++L +
Sbjct: 570 -KRIR-------VLFSGKQKTQINPLLFDKHFVSETWSLRAPDKHARAKLLEYFFSKNQI 621
Query: 570 SELTSDTGSEEFVKDIIGQTSGFMPRDL 597
+L D +F D+ +T GF P DL
Sbjct: 622 MKLNRDL---QF-SDLSLETEGFSPLDL 645
Score = 38 (18.4 bits), Expect = 2.6e-51, Sum P(4) = 2.6e-51
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 103 LKQLSVTSGSLVLVKNAETTKQRIAQ 128
+K +T GSLV+V + K R+ +
Sbjct: 168 MKSARITDGSLVVVA-PKVNKTRLVK 192
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 537 (194.1 bits), Expect = 5.8e-51, P = 5.8e-51
Identities = 125/292 (42%), Positives = 179/292 (61%)
Query: 616 VDKNEPGESDLTAKVAH--NDNSSIAATQV-MGKEDL--VKAMERSKKRNASALGAPKVP 670
V K+ G S L V+H N + +V + ++ L V + +K A A+ + P
Sbjct: 107 VVKSSTGPSFLV-NVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERP 165
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
NV++ED+GGLE + I + V+LPL H +LF G+ G+LLYGPPGTGKTLLAKAVA
Sbjct: 166 NVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA 225
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
TE + F+ V G EL+ +IGE V+DIF+ A+ P +IF DE+D++A A+ +
Sbjct: 226 TETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIA-AKRTDALT 284
Query: 790 GG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSD 847
GG + R + Q+LAE+DG D+ D+ IIGA+NRPD++DPA+LRPGRFD+++ V D
Sbjct: 285 GGDREVQRTLMQLLAEMDGF-DARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPA-PD 342
Query: 848 VSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
R +LK TRK L EDV+L IAK GA++ A+C +A +A +
Sbjct: 343 EKGRLEILKIHTRKMNLAEDVNLEEIAKMTE-GCVGAELKAICTEAGMNAIR 393
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 531 (192.0 bits), Expect = 1.4e-49, Sum P(4) = 1.4e-49
Identities = 108/224 (48%), Positives = 158/224 (70%)
Query: 677 VGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 735
+GGL + +K +L+T+Q P + +F+ LR RSG+LLYG PG GKT+LA AVA EC LN
Sbjct: 852 IGGLHETRKMLLETLQYPTKYAPIFAQCPLRLRSGLLLYGYPGCGKTMLASAVAGECGLN 911
Query: 736 FLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDR 795
F+SVKGPE++N YIG SEK+VRD+F++A++ARPC++FFDE DS+AP RG DS GV DR
Sbjct: 912 FISVKGPEILNKYIGASEKSVRDLFERAQAARPCILFFDEFDSIAPKRGH--DSTGVTDR 969
Query: 796 VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVL 855
VV+Q+L ++DG S ++++ A++RPDLIDPALLRPGR DK L + + R ++
Sbjct: 970 VVNQLLTQMDGAEGLS-GVYVLAATSRPDLIDPALLRPGRLDKSLLCDMPNHAD-RADII 1027
Query: 856 KALTRKFKLLEDV--SLYSIAKKCPPNFTGADMYALCADAWFHA 897
+A+++K + +V + +A + F+GAD+ A+ +A A
Sbjct: 1028 RAVSKKLAMSNEVVARIDEVAARTA-GFSGADLQAVVYNAHLEA 1070
Score = 67 (28.6 bits), Expect = 1.4e-49, Sum P(4) = 1.4e-49
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 584 DIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
D+ G+T GFMP DL LVA A + +S SE
Sbjct: 779 DLAGKTDGFMPGDLVLLVARARNEALIRSISE 810
Score = 48 (22.0 bits), Expect = 1.4e-49, Sum P(4) = 1.4e-49
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 399 AVLLHGLPGCGKRTVVRYVARRL---GIHVVEY-SCHNLMASSERKTSA--ALAQAFNTA 452
+VL+ G G GK + + +A RL + V+Y SC L+ R ++ L + F +A
Sbjct: 557 SVLVTGGLGSGKTALGQLLAHRLQKESLFNVKYFSCRKLVTDETRISNIKETLNRLFMSA 616
Query: 453 ----QSYSPTILLLRDFDVFRNLVSNESLPNDQVGLS---SEV-ASVIREF 495
+ + ++L D D + + + D G S SEV S++REF
Sbjct: 617 AWCARLGGQSTVILDDLDKLCPVETELQVGGDN-GRSRQNSEVICSMVREF 666
Score = 39 (18.8 bits), Expect = 1.4e-49, Sum P(4) = 1.4e-49
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 918 DSVVVEYDDFVKVLRELSPSLSMAELKKY-ELLRDQFEG 955
+ +VV ++ + L SLS AE ++ + R+ EG
Sbjct: 1166 EEIVVRWEHMERSLNTTRSSLSEAERRRLLAIYREFVEG 1204
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 494 (179.0 bits), Expect = 2.9e-49, Sum P(2) = 2.9e-49
Identities = 118/311 (37%), Positives = 179/311 (57%)
Query: 523 QVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFV 582
QVL++ A + L +RR + + + + L +LQ + +E +
Sbjct: 486 QVLVLGATNRPHALDAALRRPGRFDKEI-EIGVPNAQDRLD-ILQKLLRRVPHLLTEAEL 543
Query: 583 KDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQ 642
+ G++ DL AL +AG +R+ V + +P D S +A
Sbjct: 544 LQLANSAHGYVGADLKALCNEAGLYALRR----VLRKQPNLPD----------SKVAGLV 589
Query: 643 VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
+ +D ++ M + +A A VPNV W D+GGLE++K + V+ PL H + F+
Sbjct: 590 KITLKDFLQGMNDIRP-SAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFT 648
Query: 703 S-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQ 761
G++ GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+IF+
Sbjct: 649 QMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 708
Query: 762 KARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASN 821
KAR+ P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +D+ I+ A+N
Sbjct: 709 KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKDVTILAATN 767
Query: 822 RPDLIDPALLR 832
RPD ID LLR
Sbjct: 768 RPDRIDKELLR 778
Score = 438 (159.2 bits), Expect = 5.4e-38, P = 5.4e-38
Identities = 103/275 (37%), Positives = 155/275 (56%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++ +GGL K I + ++LPL +LF S G+ GVLLYGPPGTGKT++A+AVA
Sbjct: 344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E + GPE+I+ + GE+E +R IF +A P +IF DELD+L P R G
Sbjct: 404 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQN 461
Query: 791 GVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
V RVV+ +L +DG+ + + ++GA+NRP +D AL RPGRFDK + +GV +
Sbjct: 462 EVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQ 521
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXX 908
+ + K L R LL + L +A + GAD+ ALC +A +A +R VL
Sbjct: 522 DRLDILQKLLRRVPHLLTEAELLQLANSAH-GYVGADLKALCNEAGLYALRR-VLRKQPN 579
Query: 909 XXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
++ A V + DF++ + ++ PS +M E+
Sbjct: 580 LPDSKV--AGLVKITLKDFLQGMNDIRPS-AMREV 611
Score = 92 (37.4 bits), Expect = 2.9e-49, Sum P(2) = 2.9e-49
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 384 VLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 443
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 444 IFIDELD 450
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 491 (177.9 bits), Expect = 3.7e-49, Sum P(4) = 3.7e-49
Identities = 116/297 (39%), Positives = 178/297 (59%)
Query: 615 EVDKNEPG--ESDLTAKV------AHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGA 666
E+ PG +DL A V A + S+ ++ ++DL+ A+ + + SA
Sbjct: 396 EIASRTPGFVVADLAALVREAALRAASRASADGRPPMLHQDDLLGALTVIRPLSRSASDE 455
Query: 667 PKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLA 725
V +V +DVG + K+++ + V PL H D F+ G+ GVLLYGPPG GKT +
Sbjct: 456 VTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVV 515
Query: 726 KAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGA 785
+A+A+ L+ +VKG EL++ ++G SEK VR++F++AR + P ++F DELD+LAP RG
Sbjct: 516 RALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRRGQ 575
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
S DSG V DRVV+ +L E+DG+ D +D+ ++GA+NRPDLIDPALLRPGR ++L++V
Sbjct: 576 SFDSG-VSDRVVAALLTELDGI-DPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEP- 632
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 902
D + R +L+ + L DV L +A ++ AD AL +A A +R +
Sbjct: 633 PDAAARREILRTAGKSIPLSSDVDLDEVAAGLD-GYSAADCVALLREAALTAMRRSI 688
Score = 165 (63.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 63/232 (27%), Positives = 106/232 (45%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P ++ E++ G + + + ++L L L + G GVL+ GP G GK L +AV
Sbjct: 208 PEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV 267
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGD 788
L +++ GPE+ + G+ K V Q R V+ + D+L PA
Sbjct: 268 CDGRRL--VTLDGPEIGALAAGDRVKAVASAVQAVRHEGG-VLLITDADALLPAAAEP-- 322
Query: 789 SGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
V ++S++ + ++ + +I S RPD +D L P D+ L + + D
Sbjct: 323 ---VASLILSELRTAV-----ATAGVVLIATSARPDQLDARLRSPELCDRELGLPL-PDA 373
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
+ R+ +L+AL D++L IA + P F AD+ AL +A AA R
Sbjct: 374 ATRKSLLEALLNPVPT-GDLNLDEIASRTP-GFVVADLAALVREAALRAASR 423
Score = 69 (29.3 bits), Expect = 3.7e-49, Sum P(4) = 3.7e-49
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 524 VLLVAAADSSEGLPPTIRRCFSHEISMG-PLTEQQ-RVEMLSQLLQPVSELTSDTGSEEF 581
V+L+A + + L +R + +G PL + R +L LL PV T D +E
Sbjct: 340 VVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVP--TGDLNLDE- 396
Query: 582 VKDIIGQTSGFMPRDLHALVADAGANLIRKSNSE 615
I +T GF+ DL ALV +A +++++
Sbjct: 397 ---IASRTPGFVVADLAALVREAALRAASRASAD 427
Score = 50 (22.7 bits), Expect = 3.7e-49, Sum P(4) = 3.7e-49
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 398 VAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSER-KTSAALAQAFNTAQSYS 456
+ VL+ G G GK T+VR V + ++ +A+ +R K A+ QA +
Sbjct: 248 LGVLVSGPAGVGKATLVRAVCDGRRLVTLDGPEIGALAAGDRVKAVASAVQAVR----HE 303
Query: 457 PTILLLRDFD 466
+LL+ D D
Sbjct: 304 GGVLLITDAD 313
Score = 40 (19.1 bits), Expect = 3.7e-49, Sum P(4) = 3.7e-49
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 345 ALVLGGSI--PSALPPDLLISGSNDFVPLQGDTVKILASILAPTLCPSVLSLKFRVAV 400
++ L GS ++PP L V GD V +L L P S S AV
Sbjct: 100 SVTLSGSTLATQSVPPVTLRQALLGKVMTVGDAVSLLPRDLGPGTSTSAASRALAAAV 157
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 478 (173.3 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 116/339 (34%), Positives = 187/339 (55%)
Query: 617 DKNE-PGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWE 675
+ NE P + ++ ND I T K+ + + +K+ S VPN W
Sbjct: 452 ESNEAPPIDNQEMQLDQNDED-ICITFAHLKQAIARIQPAAKREGFST-----VPNTTWS 505
Query: 676 DVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSL 734
+VG L++V+K + + P+ + F++ G++ +G+LL+GPPG GKTL+AKAVA
Sbjct: 506 EVGALQNVRKKLEYAIVQPIERPEKFAALGIKPSAGILLWGPPGCGKTLVAKAVANASKA 565
Query: 735 NFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMD 794
NF+S+KGPEL+N Y+GESE NVR +F +A+S+ PC++FFDELD+L P R + G
Sbjct: 566 NFISIKGPELLNKYVGESEYNVRQLFSRAKSSAPCILFFDELDALVPTRDFT--MSGATS 623
Query: 795 RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE-- 852
RVV+ +L E+DG+ D Q +++IGA+NRPD ID A+ RPGR +YVG+ + +
Sbjct: 624 RVVNALLTELDGVGDR-QGIYVIGATNRPDSIDEAIRRPGRLGTDIYVGLPTPEDRFDIL 682
Query: 853 RVLKALTRKFKLLEDV---SLYSIAK--KCPPNFTGADMYALCADAWFHAAKRKVLXXXX 907
R + T D ++ +A+ +C FTGAD+ R++L
Sbjct: 683 RTIYETTVPGGRAPDAVRKTIERVARDPRCG-KFTGADL-------------RQLLTAAS 728
Query: 908 XXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKY 946
R+ ++ ++ +D+ + L E+ PS+ ++ KY
Sbjct: 729 EACMIRVQDDEAPMISEEDWERALDEVKPSVK--DIDKY 765
Score = 315 (115.9 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 78/238 (32%), Positives = 133/238 (55%)
Query: 655 RSKKRNASALGAPKVPNV----KWEDVGGLEDVKKSILDTVQLPL-LHKDLFSSGLRKRS 709
+ K+R S A VP V K ED+GG+ + +++ + LPL + ++ G + ++
Sbjct: 173 KRKRRTRSVKEAAAVPEVFNGPKLEDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQA 232
Query: 710 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 769
+LL+GP GTGKT + +A+A F+ V L++ GESEKN+R+ F +A PC
Sbjct: 233 AILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPC 292
Query: 770 VIFFDELDSLAPARGASGDSGGV-MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDP 828
++F DE+D +A + + V M +SQ L +I +++ +I A+NRPD I+P
Sbjct: 293 LLFLDEVDVVAGKMDGAQKAMEVRMSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEP 352
Query: 829 ALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
+ R RF +L + + D + RE +L+ +TR +L +DV ++A+ P + GAD+
Sbjct: 353 TVRR--RFQEL-EMSM-PDEAARESILRTMTRNKRLSDDVDFTALAR-LTPGYVGADL 405
Score = 102 (41.0 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 395 KFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQS 454
K + A+LLHG G GK VVR +A L V S +L++ ++ + +AF+ A
Sbjct: 229 KPQAAILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIR 288
Query: 455 YSPTILLLRDFDVFRNLVSNESLPNDQVGLSSEVA 489
+P +L L + DV + + V +SSE++
Sbjct: 289 LAPCLLFLDEVDVVAGKMDGAQKAME-VRMSSEIS 322
Score = 86 (35.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 55/223 (24%), Positives = 92/223 (41%)
Query: 522 QQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEF 581
+ V+++AA + + + PT+RR F E+ M E R +L + + L+ D +F
Sbjct: 336 RNVVVIAATNRPDSIEPTVRRRFQ-ELEMSMPDEAARESILRTMTRN-KRLSDDV---DF 390
Query: 582 VKDIIGQTSGFMPRDL---------HALVADAGANLIRK-------SNSEVDKNE----- 620
+ T G++ DL A++A A + R S S VD+
Sbjct: 391 TA-LARLTPGYVGADLATAVDFAASEAMMAVYTAKISRLTAAVATGSPSVVDRIRLPWTL 449
Query: 621 PGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPK------VPNVKW 674
P ES+ + DN + Q ED+ K+ A A K VPN W
Sbjct: 450 PAESNEAPPI---DNQEMQLDQ--NDEDICITFAHLKQAIARIQPAAKREGFSTVPNTTW 504
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPP 717
+VG L++V+K + + P+ + F++ K S +L P
Sbjct: 505 SEVGALQNVRKKLEYAIVQPIERPEKFAALGIKPSAGILLWGP 547
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 481 (174.4 bits), Expect = 9.0e-48, Sum P(2) = 9.0e-48
Identities = 115/306 (37%), Positives = 177/306 (57%)
Query: 523 QVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFV 582
QVL++ A + L +RR + + + + L +LQ + +E +
Sbjct: 483 QVLVLGATNRPHALDAALRRPGRFDKEI-EIGVPNAQDRLD-ILQKLLRRVPHLLTEAEL 540
Query: 583 KDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQ 642
+ G++ DL AL +AG + +R+ V + +P D S +A
Sbjct: 541 LQLANSAHGYVGADLKALCNEAGLHALRR----VLRRQPNLPD----------SKMAGLV 586
Query: 643 VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
+ +D ++ M + +A A VPNV W D+GGLE+VK + V+ PL H + F+
Sbjct: 587 KITLKDFLQGMNDIRP-SAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFT 645
Query: 703 S-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQ 761
G++ GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR+IF+
Sbjct: 646 QMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 705
Query: 762 KARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASN 821
KAR+ P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +++ I+ A+N
Sbjct: 706 KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKNVTILAATN 764
Query: 822 RPDLID 827
RPD ID
Sbjct: 765 RPDRID 770
Score = 442 (160.7 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 108/291 (37%), Positives = 162/291 (55%)
Query: 656 SKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLY 714
+K R S A ++ V ++ +GGL K I + ++LPL +LF S G+ GVLLY
Sbjct: 326 TKNRTNSKDQANQL-KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLY 384
Query: 715 GPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFD 774
GPPGTGKT++A+AVA E + GPE+I+ + GE+E +R IF +A P +IF D
Sbjct: 385 GPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFID 444
Query: 775 ELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLR 832
ELD+L P R G V RVV+ +L +DG+ + + ++GA+NRP +D AL R
Sbjct: 445 ELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRR 502
Query: 833 PGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCAD 892
PGRFDK + +GV + + + K L R LL + L +A + GAD+ ALC +
Sbjct: 503 PGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAH-GYVGADLKALCNE 561
Query: 893 AWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
A HA +R VL ++ A V + DF++ + ++ PS +M E+
Sbjct: 562 AGLHALRR-VLRRQPNLPDSKM--AGLVKITLKDFLQGMNDIRPS-AMREV 608
Score = 92 (37.4 bits), Expect = 9.0e-48, Sum P(2) = 9.0e-48
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 381 VLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 440
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 441 IFIDELD 447
>FB|FBgn0013563 [details] [associations]
symbol:Pex1 "Peroxin 1" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006625 "protein targeting to
peroxisome" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0021782 "glial cell development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:AE014296
GO:GO:0006200 GO:GO:0007422 GO:GO:0007417 GO:GO:0007031
GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0048137 UniGene:Dm.10724
GO:GO:0021782 GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 GeneTree:ENSGT00550000075032 EMBL:AY075423
RefSeq:NP_652016.1 SMR:Q9VUC7 IntAct:Q9VUC7 MINT:MINT-335404
STRING:Q9VUC7 EnsemblMetazoa:FBtr0075777 GeneID:45460
KEGG:dme:Dmel_CG6760 UCSC:CG6760-RA FlyBase:FBgn0013563
InParanoid:Q9VUC7 OMA:VLMWPSR OrthoDB:EOG4BNZSX GenomeRNAi:45460
NextBio:838158 Uniprot:Q9VUC7
Length = 1006
Score = 504 (182.5 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 118/273 (43%), Positives = 167/273 (61%)
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFS-SGLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
E++ GLE V + + + P + +F+ S LR ++GVLLYGPPGTGKT L +AT +
Sbjct: 720 EELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATSWN 779
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVM 793
L +SVKGPEL+ YIG+SE+NVR++F +ARSARPCV+FFDE DSLAP RG DS GV
Sbjct: 780 LRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRGH--DSTGVT 837
Query: 794 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 853
DRVV+Q+L E+DG+ + Q + +I A++RP+L+DPALLR GR D+L+ + D R R
Sbjct: 838 DRVVNQLLTELDGV-EGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPL-PDAPARVR 895
Query: 854 VLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXR 913
+ +AL+ L E V A K N+TGAD+ ++ A A K + +
Sbjct: 896 IFEALSSTLSLDECVDFDWFAGKTA-NYTGADIQSILTSANMAAVKEALAQFGHEKLAKK 954
Query: 914 IDQADSVVVEYDDFVKVLRELSPSLSMAELKKY 946
I ++E F + PSLS +++ KY
Sbjct: 955 ISLKQKHLIE--SF----QTTRPSLSASDVAKY 981
Score = 77 (32.2 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 42/166 (25%), Positives = 71/166 (42%)
Query: 348 LGGSIPSALPPDLLISGSNDFVPLQGDTVKILASI---LAPTLCPSVLSLKFRVA-VLLH 403
+G I PP +S D + L + KI+ + L LC S + R VLL
Sbjct: 426 VGEIIKEETPPTSPLS-VQDLIQLP-EYDKIVDQVVQELRMNLCLSADNSVMRQCNVLLA 483
Query: 404 GLPGCGKRTVVRYVARRLGIHVVEYSCH----NLMASSERKTSAA---LAQAFNTAQSYS 456
G G GK +V + +L +Y CH + S RKT + L F + ++
Sbjct: 484 GASGTGKTVLVERILDQLS-RKPDY-CHFEFFHGSRSKGRKTESIQKDLRNIFTSCLQHA 541
Query: 457 PTILLLRDFDVFRNLVSNESLPNDQV--GLSSEVASVIREFTEPSA 500
P I++L + DV + +S + + ++ V +I ++T +A
Sbjct: 542 PAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLIVQYTTNNA 587
Score = 39 (18.8 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 24 DSMVERRKPLVLSSTKLLINSVLSSSRR 51
D + E+ PL SST + + + ++R
Sbjct: 200 DELTEKLTPLTHSSTVSNVKNTIQRNKR 227
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 462 (167.7 bits), Expect = 5.7e-46, Sum P(2) = 5.7e-46
Identities = 144/470 (30%), Positives = 238/470 (50%)
Query: 522 QQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSE 579
++V++V + + + L P +RR F E+ +G T +QR +LQ ++ +G
Sbjct: 338 REVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQR----KAILQVITSKMPISGQV 393
Query: 580 EFVKDIIGQ-TSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSI 638
+ +++ + T G++ DL AL +A + S +KN+ DN +I
Sbjct: 394 DL--NLLAEMTVGYVGADLTALCREAAMQALLHS----EKNQ-------------DNPTI 434
Query: 639 AATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPL-LH 697
T + + K ++ S R S +G + V WE +GGLEDVK + +++ PL
Sbjct: 435 DETDFL---EAFKKIQPSSFR--SVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEWPLKFP 489
Query: 698 KDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVR 757
++ GL + GVLLYGPPG KT L +A+AT C +F+SV G +L + ++G+SEK +
Sbjct: 490 REFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILS 549
Query: 758 DIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL---------- 807
+F++AR+ P ++F DE+DS+ +R S V DRV+S +L E+DG+
Sbjct: 550 QVFRQARANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDGVGLKTIERRGS 609
Query: 808 -NDSS--------------QDLF-----IIGASNRPDLIDPALLRPGRFDKLLYVGVNSD 847
+D Q++F ++ A+NRPD++D ALLRPGR DK++Y+ D
Sbjct: 610 KSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPP-PD 668
Query: 848 VSYRERVLKALTRKFKLLEDVSLYSIAKK-CPPNFTGADMYALCADAWFHAAKRKVLXXX 906
R +LK T+ + DVSL +A + C F+GAD+ LC +A A + L
Sbjct: 669 EKGRLSILKVCTKNTPMGPDVSLEKVAAETC--FFSGADLGNLCKEAALLALQENGL--- 723
Query: 907 XXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGS 956
+ V+ + F++ L+ + PSLS +L Y+ L + E S
Sbjct: 724 -----------EVTTVKQEHFLESLKTVKPSLSHKDLTLYKNLFQKKEFS 762
Score = 401 (146.2 bits), Expect = 6.2e-34, P = 6.2e-34
Identities = 97/265 (36%), Positives = 153/265 (57%)
Query: 677 VGGLEDVKKSILDTVQLPLLH-KDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 735
+GGL + S+ + ++LPL + + L S GL GVLL GPPG GKT L +AVA E
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 736 FLSVKGPELINMYIGESEKNVRDIFQKAR---SARPCVIFFDELDSLAPARGASGDSGGV 792
L+V P L GE+E+NVR IF++AR S RP ++F DE+D+L P RG G
Sbjct: 262 LLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRG--GPHQAP 319
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
RVV+Q+L +DG+ + +++ ++G++NRPD +DPAL RPGRFD+ + +G + + R+
Sbjct: 320 ESRVVAQVLTLLDGIGED-REVVVVGSTNRPDALDPALRRPGRFDREVVIGTPT-LRQRK 377
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXX 912
+L+ +T K + V L +A+ + GAD+ ALC +A A + +L
Sbjct: 378 AILQVITSKMPISGQVDLNLLAEMTV-GYVGADLTALCREA----AMQALLHSEK----- 427
Query: 913 RIDQADSVVVEYDDFVKVLRELSPS 937
D+ ++ DF++ +++ PS
Sbjct: 428 ---NQDNPTIDETDFLEAFKKIQPS 449
Score = 125 (49.1 bits), Expect = 0.00057, P = 0.00057
Identities = 62/254 (24%), Positives = 110/254 (43%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PGC K T+VR +A V S +L + + L+Q F A++ +P I
Sbjct: 503 VLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAI 562
Query: 460 LLLRDFDVFRNLVSNESLPNDQVGLSSEVASVIREFTE----PSAEDEDEESHGYFPVKE 515
+ L + D +++ + S+ + + V SV+ + + E +S + K+
Sbjct: 563 VFLDEID---SILGSRSISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQ 619
Query: 516 IEK--------ICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQL 565
+EK I V++VAA + + L + R I + P E+ R+ +L
Sbjct: 620 LEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILK-- 677
Query: 566 LQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVD--KNEPG- 622
V + G + ++ + +T F DL L +A ++++ EV K E
Sbjct: 678 ---VCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFL 734
Query: 623 ESDLTAK--VAHND 634
ES T K ++H D
Sbjct: 735 ESLKTVKPSLSHKD 748
Score = 96 (38.9 bits), Expect = 5.7e-46, Sum P(2) = 5.7e-46
Identities = 37/107 (34%), Positives = 49/107 (45%)
Query: 369 VPLQG--DTVKILASILA-PTLCPSVL-SLKFRV--AVLLHGLPGCGKRTVVRYVARRLG 422
VPL G + L +L P P L SL V VLL G PG GK +VR VAR G
Sbjct: 200 VPLGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETG 259
Query: 423 IHVVEYSCHNLMASSERKTSAALAQAFNTAQ---SYSPTILLLRDFD 466
++ S L + +T + + F A+ S PT+L L + D
Sbjct: 260 AELLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVD 306
>DICTYBASE|DDB_G0268066 [details] [associations]
symbol:DDB_G0268066 "putative ATPase" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0268066 GO:GO:0005524
EMBL:AAFI02000003 eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_647530.1
ProteinModelPortal:Q55FK3 EnsemblProtists:DDB0189755 GeneID:8616337
KEGG:ddi:DDB_G0268066 OMA:ANFIPIN Uniprot:Q55FK3
Length = 864
Score = 509 (184.2 bits), Expect = 1.1e-45, P = 1.1e-45
Identities = 160/575 (27%), Positives = 282/575 (49%)
Query: 390 SVLSLKFRVAVLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAF 449
S L + ++LL+G CGK T++ +++++GI + + +L+ + T L + +
Sbjct: 328 SELGISKPKSLLLYGPQSCGKSTLINLISKQMGIKIFHINLSDLV-KYQPNTKGLLLKYY 386
Query: 450 NTAQSYSP-TILLLRDFD-VFRNLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEES 507
Q+ + +ILL + D +F + +S +++ + ++ F + + D E+
Sbjct: 387 QAKQNTTTNSILLFDNIDEIFPQFDNTDS--SNKNSNQQNINQLMNLFL--NLLNNDNEN 442
Query: 508 HGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQ 567
+ E + ++ + + L IR F EI + P +++R ++ + L+
Sbjct: 443 ND----NE-----NNNIFIIGITNKIKILNNFIRSNFEEEIRIDPPNQEKRKQIFNWNLK 493
Query: 568 PVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRK---SNSEVDKNEPGES 624
E + + + ++ I ++G M D+ L +A +++ N + D +E GE
Sbjct: 494 GFGENIEN--NLKIIEKINENSNGLMGGDITILCRNAKIKSLKRYKIENEKQDDDEGGEE 551
Query: 625 DLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVK 684
L ND + + E+ R K S + +P +P V W D+GGLE K
Sbjct: 552 LLIKSFNLNDIKFLENDFI---EEF-GGQYRKDKTMISKI-SPSIPKVLWSDIGGLEVAK 606
Query: 685 KSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 743
+ + V H D G++ G+L+YGPPGTGKT+LAK VA E NF+ + E
Sbjct: 607 DVLKEMVVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTMLAKCVAFEAKANFIPINISE 666
Query: 744 LINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAE 803
LI IGESEK + +IF+ A ++ P +IF DE+ S+ + +S +S +++SQ+L E
Sbjct: 667 LIQGEIGESEKTLSEIFRIAINSSPSIIFIDEIQSIFGLKESSNNSS---KKLISQLLIE 723
Query: 804 ID---GLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTR 860
+D G ND + I+ A+N P IDP+ LR GRFDK +Y+G +V R+ + + L +
Sbjct: 724 LDNTIGNNDGGNRVMILAATNMPQAIDPSFLRSGRFDKTVYIGP-PEVDERKSIFETLIK 782
Query: 861 KFKLLED--VSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQAD 918
+ D V L +AK NFTG+D+ AL + +A +R +
Sbjct: 783 NSSIKVDSTVDLNQLAKYTI-NFTGSDINALLKKSGLYAIQRDI-------------NVT 828
Query: 919 SVVVEYDDFVKVLRELSPSLS---MAELKKYELLR 950
S+ + DD +KV E+ PS+S + +LK++E R
Sbjct: 829 SITM--DDIMKVFWEMKPSVSPDQIFQLKQWEKSR 861
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 469 (170.2 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 102/238 (42%), Positives = 150/238 (63%)
Query: 591 GFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLV 650
G++ DL AL +AG +R+ V + +P D S +A + D +
Sbjct: 558 GYVGADLKALCNEAGLYALRR----VLRKQPNLPD----------SKVAGMVKITLNDFL 603
Query: 651 KAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRS 709
+ M + +A A VPNV W D+GGLE++K + V+ PL H FS G++
Sbjct: 604 QGMNDIRP-SAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPK 662
Query: 710 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 769
GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE+ VR++F+KAR+ P
Sbjct: 663 GVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPS 722
Query: 770 VIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 827
+IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + +++ ++ A+NRPD ID
Sbjct: 723 IIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKNVTVLAATNRPDRID 779
Score = 450 (163.5 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 96/224 (42%), Positives = 143/224 (63%)
Query: 635 NSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLP 694
+S +A + D ++ M + +A A VPNV W D+GGLE++K + V+ P
Sbjct: 588 DSKVAGMVKITLNDFLQGMNDIRP-SAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWP 646
Query: 695 LLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE 753
L H FS G++ GVLLYGPPG KT++AKA+A E LNFL++KGPEL+N Y+GESE
Sbjct: 647 LKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 754 KNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD 813
+ VR++F+KAR+ P +IFFDELD+LA RG+S +G V DRV++Q+L E+DG+ + ++
Sbjct: 707 RAVREVFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGI-EQLKN 765
Query: 814 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKA 857
+ ++ A+NRPD R DK++ V + + E +KA
Sbjct: 766 VTVLAATNRPD----------RIDKIIAVCKEAALLALEENIKA 799
Score = 448 (162.8 bits), Expect = 5.6e-39, P = 5.6e-39
Identities = 139/449 (30%), Positives = 220/449 (48%)
Query: 518 KICRQQVLLVAAADSSE-GLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDT 576
++C+ QVL V D + G P + H G +EQ +E S + +S S
Sbjct: 185 RLCKLQVLQVKGTDGTTLGKPQSSSGTDVH----GMASEQSSMES-SDV--DISFQLSQL 237
Query: 577 GSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNS 636
+E + Q++ P + + AG L+ + S D + G ++T D+S
Sbjct: 238 DLKE-PQSPASQSTPCKPINDRTM-NKAGEVLLDVTQSPRDGSGLGLEEITGLKCSFDSS 295
Query: 637 SIAATQVMGKEDLVKAMERSKKRNASA---------LGAPKV-PNVKWED---------V 677
TQ + +E L+K+ K N + K+ N K +D +
Sbjct: 296 KEGNTQPISEEKLLKSTSAGAKNNTDTFYFISSTTRINLRKICTNSKEQDSQFKVTYDMI 355
Query: 678 GGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF 736
GGL K+I + ++LPL +LF S G+ G+LLYGPPGTGKT++A+AVA E
Sbjct: 356 GGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYV 415
Query: 737 LSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRV 796
+ GPE+I+ + GE+E +R IF +A P +IF DELD+L P R G V RV
Sbjct: 416 SVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQSEVEKRV 473
Query: 797 VSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERV 854
V+ +L +DG+ + + ++GA+NRP +D AL RPGRFDK + +G+ + + +
Sbjct: 474 VASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDIL 533
Query: 855 LKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRI 914
K L R LL L +A + GAD+ ALC +A +A +R VL ++
Sbjct: 534 QKLLRRVPHLLTKAELLRLANNAH-GYVGADLKALCNEAGLYALRR-VLRKQPNLPDSKV 591
Query: 915 DQADSVVVEYDDFVKVLRELSPSLSMAEL 943
A V + +DF++ + ++ PS +M E+
Sbjct: 592 --AGMVKITLNDFLQGMNDIRPS-AMREV 617
Score = 89 (36.4 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LL+G PG GK + R VA +G +V + +++ +T A L Q F A P+I
Sbjct: 390 LLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSI 449
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 450 IFIDELD 456
>POMBASE|SPCC553.03 [details] [associations]
symbol:pex1 "AAA family ATPase Pex1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
SMART:SM00382 PomBase:SPCC553.03 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464
GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12 PIR:T41400
RefSeq:NP_587770.1 ProteinModelPortal:O74941
EnsemblFungi:SPCC553.03.1 GeneID:2539405 KEGG:spo:SPCC553.03
OrthoDB:EOG4TQQJ3 NextBio:20800569 Uniprot:O74941
Length = 937
Score = 484 (175.4 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 94/224 (41%), Positives = 153/224 (68%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
+++W D+ G+++ K+++ D ++ P+ + ++ LR +G+LL+G PG GKT LA A++
Sbjct: 602 SIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAIS 661
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
+ + F+S+KGPEL++ YIG+SE+ VRD+F +A+ A+PCV+FFDE DS+AP RG DS
Sbjct: 662 STFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQ--DS 719
Query: 790 GGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
GV DRVV+Q+L ++DG +S ++I+ A+ RPD+IDPALLRPGR DKL++ + ++
Sbjct: 720 TGVTDRVVNQILTQMDGA-ESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEE 778
Query: 850 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 893
R VL+ L +F + E+ ++ +T AD+ +L DA
Sbjct: 779 -RLEVLQKLANRFHI-ENAAMLKKLSTLTDGYTYADLSSLLYDA 820
Score = 70 (29.7 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEY----SCHNLMASSERKTSAALAQAFNTAQSY 455
+ ++G GCGK +V + ++ + + SC + SS K + F A+ Y
Sbjct: 375 IYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQAERY 434
Query: 456 SPTILLLRDFDVFRNLVSNESLPNDQVGLSSE 487
P+I+ L D L+S+ + N ++G E
Sbjct: 435 EPSIIYLDDVHC---LISSSN-ENGELGFVEE 462
Score = 45 (20.9 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 914 IDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE-LLRD 951
+ + SVV+E ++ L++ SPSL+ E + L RD
Sbjct: 875 MSDSKSVVIEDYMLMEALKKNSPSLNSEEFEHLSNLYRD 913
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 449 (163.1 bits), Expect = 6.7e-45, Sum P(3) = 6.7e-45
Identities = 104/265 (39%), Positives = 162/265 (61%)
Query: 646 KEDLVKA---MERSKKRNASALGAP-KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF 701
KEDL + +E ++ A A G ++ NVK+EDVGG + K + + + + H +++
Sbjct: 126 KEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVY 184
Query: 702 SS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 760
G+ GVLL+GPPG GKTLLA A+A E L L V PE+++ GESE+ +R++F
Sbjct: 185 HHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELF 244
Query: 761 QKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND--SSQDLFIIG 818
++A S PC+IF DE+D++ P R + S + R+V+Q+L +D LN+ ++ + +IG
Sbjct: 245 EQAVSNAPCIIFIDEIDAITPKREVA--SKDMERRIVAQLLTCMDDLNNVAATARVLVIG 302
Query: 819 ASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCP 878
A+NRPD +DPAL R GRFD+ + +G+ + S RER+L+ L RK +L + +A
Sbjct: 303 ATNRPDSLDPALRRAGRFDREICLGIPDEAS-RERILQTLCRKLRLPQAFDFCHLAH-LT 360
Query: 879 PNFTGADMYALCADAWFHAAKRKVL 903
P F GAD+ ALC +A A R ++
Sbjct: 361 PGFVGADLMALCREAAMCAVNRVLM 385
Score = 373 (136.4 bits), Expect = 1.9e-41, Sum P(4) = 1.9e-41
Identities = 76/155 (49%), Positives = 104/155 (67%)
Query: 634 DNSSIAATQVMGK----EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILD 689
D ++ Q+ G D + A+ S + +A G VPNV W D+G LED+++ +
Sbjct: 431 DQDPLSEEQMQGLCIELNDFIVALS-SVQPSAKREGFVTVPNVTWADIGALEDIREELTM 489
Query: 690 TVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 748
+ P+ + D F + GL +GVLL GPPG GKTLLAKAVA E LNF+SVKGPEL+NMY
Sbjct: 490 AILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 549
Query: 749 IGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
+GESE+ VR +FQ+A+++ PCVIFFDE+D+L P R
Sbjct: 550 VGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR 584
Score = 98 (39.6 bits), Expect = 1.9e-41, Sum P(4) = 1.9e-41
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLLHG PGCGK + +A L + +++ + +++ ++ L + F A S +P I
Sbjct: 195 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCI 254
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 255 IFIDEID 261
Score = 80 (33.2 bits), Expect = 1.9e-41, Sum P(4) = 1.9e-41
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 523 QVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEE 580
+VL++ A + + L P +RR F EI +G E R +L L + + L + +
Sbjct: 297 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL-RLPQ---AFD 352
Query: 581 FVKDIIGQTSGFMPRDLHALVADAG---ANLIRKSNSEVDKNEPGESDLTAK 629
F + T GF+ DL AL +A N + E K P DL +K
Sbjct: 353 FCH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSK 403
Score = 42 (19.8 bits), Expect = 6.7e-45, Sum P(3) = 6.7e-45
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 915 DQADSVVVEYDDFVKVLRELSPS 937
+Q + +E +DF+ L + PS
Sbjct: 438 EQMQGLCIELNDFIVALSSVQPS 460
Score = 37 (18.1 bits), Expect = 6.7e-45, Sum P(3) = 6.7e-45
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 237 PKYASHLRVSFVKIPECGTLESLKGSSAIEAEDRQ 271
P+ A+H+ S + + G +S+ S+ E E R+
Sbjct: 7 PQSANHMNSSLLSLYRKGNPDSV--SNTPEMEQRE 39
>WB|WBGene00004191 [details] [associations]
symbol:prx-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0006625 "protein targeting
to peroxisome" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0005778 HSSP:Q01853 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 GeneTree:ENSGT00550000075032
EMBL:Z70205 UniGene:Cel.18145 GeneID:181538 KEGG:cel:CELE_C11H1.4
CTD:181538 NextBio:914356 EMBL:AB054992 PIR:T19207 PIR:T19208
RefSeq:NP_510386.2 ProteinModelPortal:G5ED99 SMR:G5ED99
EnsemblMetazoa:C11H1.4a WormBase:C11H1.4a OMA:PYPEHGI
Uniprot:G5ED99
Length = 996
Score = 486 (176.1 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 106/227 (46%), Positives = 149/227 (65%)
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
EDVGG+ + KK + + P + LF S G+ G+LL+GP G GKTLLA A + +
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 787
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVM 793
+ ++VKGPEL++ YIG SE+NVR +F+KARS PC++FFDELDSLAP RG DS GV
Sbjct: 788 FSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKRGH--DSTGVT 845
Query: 794 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 853
DRVV+Q+L E+DG + + I+G ++R DLID ALLRPGRFD +Y G + + + R
Sbjct: 846 DRVVNQLLTELDGAEGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCG-HPEKTERLD 904
Query: 854 VLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
++K LT K K DV +A+K ++GAD+ L +A F+ A++
Sbjct: 905 IMKVLTNKLKPT-DVDFECLAQKTD-GWSGADLQLLFTNAQFYNARQ 949
Score = 62 (26.9 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSA-----ALAQAFNTAQS 454
V++ G G GK T ++ +ARRL + C + + + SA L+ + +
Sbjct: 504 VMVLGGNGSGKTTFIKKLARRLSHNSSVTFCKMVPCALLKGRSADIIEKLLSDTLHEMEV 563
Query: 455 YSPTILLLRDFDVFRNLVSNE 475
P+ L L DFDV + E
Sbjct: 564 KKPSCLFLDDFDVILPQIDQE 584
Score = 38 (18.4 bits), Expect = 9.7e-42, Sum P(2) = 9.7e-42
Identities = 8/40 (20%), Positives = 20/40 (50%)
Query: 547 EISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDII 586
E+ + +TE + + + + Q VS + D + F+ + +
Sbjct: 174 ELHVQTVTEGSQNDEKATMAQKVSNIVQDLSMQGFLSNYV 213
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 475 (172.3 bits), Expect = 5.1e-44, Sum P(2) = 5.1e-44
Identities = 127/389 (32%), Positives = 204/389 (52%)
Query: 523 QVLLVAAA-DSSEGLPPTIRRCF--SHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSE 579
+V+++AA D +P +RR + I + P+ +R ++S L P D E
Sbjct: 341 KVIVIAACRDYITIVPEKLRRPYRLQRAILLPPMDMSRRTAVISSLNPPFHP---DV-KE 396
Query: 580 EFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIA 639
+ + D+ +T + DL L++ + K + + ESD+ K
Sbjct: 397 QIICDLSDRTHAYNGLDLQKLLSTIDYLVAAKLHHMQPEAAGTESDVRPKPP-------- 448
Query: 640 ATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKD 699
A + L A+ + + K P V+W+D+ G E VK+ + V K+
Sbjct: 449 ADTAFYTDSLEAALLEIRPTAMQDVNL-KPPPVRWDDISGQESVKRDLRLAVHFITRPKE 507
Query: 700 LFSSGLR-KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRD 758
+R G LLYGPPG KT+ A+A+ATE LNF +VKG EL+NMY+GESE+ +RD
Sbjct: 508 EIQKFIRVPPKGFLLYGPPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGESERQIRD 567
Query: 759 IFQKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDR----VVSQMLAEIDGLNDSSQD 813
+F +AR+A P +IFFDE+DS+A +R G D GG + V++ +L E+DG D +
Sbjct: 568 LFSRARAAAPSMIFFDEIDSIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDGFEDL-RG 626
Query: 814 LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSI 873
+F++ A+NRP +DPA++RPGRFD+++YV D + RE +L+ + +L DV +
Sbjct: 627 VFVLAATNRPHALDPAIMRPGRFDEIIYVPP-PDPAAREAILRKNSAGCQLAPDVDFARL 685
Query: 874 AKKCPPNFTGADMYALCADAWFHAAKRKV 902
A+ N +GA++ C A A +R +
Sbjct: 686 AQLTEGN-SGAEVAGTCQSAGKLAMRRSL 713
Score = 62 (26.9 bits), Expect = 5.1e-44, Sum P(2) = 5.1e-44
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 400 VLLHGLPGCGKRTVVRYVAR-RLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPT 458
++LHG G GK ++ +V+R R G S H + AS + K + F T + +
Sbjct: 247 LVLHGGSGTGKTMLLDHVSRTRWG------SVHRVKASDKSKD---IQDIFQTVTGQARS 297
Query: 459 ILLLRDFD 466
I+L+ D D
Sbjct: 298 IVLIDDLD 305
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 466 (169.1 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 100/262 (38%), Positives = 157/262 (59%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+LP+LH + F G+ GVL YGPPGTGKTLLA+AV
Sbjct: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGD 788
A F+ V G EL+ Y+GE + VR++FQ ARS + C++FFDE+D++ AR G
Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
Query: 789 SG-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSD 847
G + R + +++ ++DG D+ ++ ++ A+NRPD +DPALLRPGR D+ + G+ D
Sbjct: 283 GGDNEVQRTMLEIVNQLDGF-DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL-PD 340
Query: 848 VSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKVLXX 905
+ R ++ K TR D+ +A+ CP N TGAD+ ++C +A +A A+RK +
Sbjct: 341 LESRTQIFKIHTRTMNCERDIRFELLARLCP-NSTGADIRSVCTEAGMYAIRARRKTVTE 399
Query: 906 XXXXXXXRIDQADSVVVEYDDF 927
+D + V+ Y F
Sbjct: 400 KDF-----LDAVNKVIKGYQKF 416
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 463 (168.0 bits), Expect = 5.9e-43, P = 5.9e-43
Identities = 106/259 (40%), Positives = 158/259 (61%)
Query: 648 DLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLR 706
DL K + S + KVP+ ++ VGGL+ K I + ++LP+ H +LF S G+
Sbjct: 117 DLYKILPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIA 176
Query: 707 KRSGVLLYGPPGTGKTLLAKAVA--TECSLNFLSVKGPELINMYIGESEKNVRDIFQKAR 764
+ GV+LYGPPGTGKTLLA+AVA TEC F+ V G EL+ YIGE + VR++F AR
Sbjct: 177 QPKGVILYGPPGTGKTLLARAVAHHTECK--FIRVSGSELVQKYIGEGSRMVRELFVMAR 234
Query: 765 SARPCVIFFDELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNR 822
P +IF DE+DS+ +R G SGG + R + ++L ++DG +SS+D+ II A+NR
Sbjct: 235 EHAPSIIFMDEIDSIGSSR-VEGSSGGDSEVQRTMLELLNQLDGF-ESSKDIKIIMATNR 292
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
D++DPALLRPGR D+ + + V+ R +LK +R L ++L IA+K +
Sbjct: 293 LDILDPALLRPGRIDRKIEFPAPT-VAARTDILKIHSRSMNLTRGINLRKIAEKMN-GCS 350
Query: 883 GADMYALCADAWFHAAKRK 901
GAD+ +C +A +A + +
Sbjct: 351 GADVKGVCTEAGMYALRER 369
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 462 (167.7 bits), Expect = 7.6e-43, P = 7.6e-43
Identities = 100/264 (37%), Positives = 158/264 (59%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P++ ++DVGG ++ + + + V++PLLH + F + G+ GVL+YGPPGTGKTL A+AV
Sbjct: 165 PDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAV 224
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VRD+FQ ARS + C+IFFDE+D++ AR GA
Sbjct: 225 ANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGA 284
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPALLRPGR D+ + G+
Sbjct: 285 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL- 340
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKVL 903
D+ R + + D+ +A+ CP N TGAD+ ++C +A A A+RKV+
Sbjct: 341 PDLEGRAHIFTIHAKTMSCARDIRFELLARLCP-NSTGADIRSVCTEAGMFAIRARRKVV 399
Query: 904 XXXXXXXXXRIDQADSVVVEYDDF 927
++ D V+ Y F
Sbjct: 400 SEKDF-----LEAIDKVIKSYAKF 418
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 484 (175.4 bits), Expect = 9.5e-43, Sum P(2) = 9.5e-43
Identities = 134/401 (33%), Positives = 222/401 (55%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRC--FSHEISMGPLTEQQRVEMLSQLLQ--PVSE 571
I+ I +++L + S E + +I R I + T+ +R+ +LS LL+ P+
Sbjct: 331 IDHIKSNEIIL-STCTSVENIDQSITRAGRIDKFIHLTIPTQSKRMLILSNLLKNTPLQY 389
Query: 572 LTSDTGS----------EEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNEP 621
T++ E+F+ ++ T GF+ +DL L +L+ S+ E ++ E
Sbjct: 390 DTNNNNDDIDQCKIKDKEQFIVELSKITPGFLFKDLTKLCRTV--SLLTVSSFEEEEEEE 447
Query: 622 GESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLE 681
E++ K++ + KE L K ++ S N V NVKW+ +GG +
Sbjct: 448 NENEKEIKISFK----------IFKEAL-KFIKPSTLINFDVT----VQNVKWDRIGGYK 492
Query: 682 DVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 740
VK+ ++ PL ++D F L SG+LL+GP G GK+L+ KA+ATE S+NF+S+K
Sbjct: 493 QVKERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVKAIATEMSINFISIK 552
Query: 741 GPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS--GGVMDRVVS 798
G ++ + ++GESE+ +RD+F+ AR + PC++FFDE+DSL +RG+ D+ GG R++S
Sbjct: 553 GSDIYSKWLGESERIIRDLFKSARLSSPCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILS 612
Query: 799 QMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKAL 858
Q+L E+DG+ SQ +F+IG +N ID ALLRPGRF+ L+++ + S + R +L L
Sbjct: 613 QLLNEMDGIQVKSQ-IFLIGCTNSIQSIDSALLRPGRFESLIHIDLPS-LDDRLDILNVL 670
Query: 859 T------RKFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 893
+ K ++ + V L IA + FTG+ +Y LC A
Sbjct: 671 STNSLNFNKDEITQQVWL-DIATQTS-GFTGSQLYDLCNQA 709
Score = 38 (18.4 bits), Expect = 9.5e-43, Sum P(2) = 9.5e-43
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+L+ G G K ++ Y+A++ Y NL + + N+ + P I
Sbjct: 248 ILIDGPEGTSKLQLIEYIAQQYN-----YKYLNLNELVNGGSGGGGGEQLNSKE---PMI 299
Query: 460 LLLRDFDVFRNLVS-NES 476
+L + D +S NE+
Sbjct: 300 YILNNLDSIVGKISDNEN 317
>MGI|MGI:1344353 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISO] [GO:0001578
"microtubule bundle formation" evidence=IGI] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005819 "spindle" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030424
"axon" evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=ISO]
[GO:0030496 "midbody" evidence=ISO] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0045502 "dynein binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051013 "microtubule severing" evidence=IGI;ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051329 "interphase of mitotic
cell cycle" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1344353 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 GO:GO:0030424 GO:GO:0016887
eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0045502 HAMAP:MF_03023
HOGENOM:HOG000225142 OrthoDB:EOG4CJVGZ EMBL:AF153197 EMBL:BC009136
IPI:IPI00125451 UniGene:Mm.28127 UniGene:Mm.421297 PDB:2RPA
PDBsum:2RPA ProteinModelPortal:Q9WV86 SMR:Q9WV86 STRING:Q9WV86
PhosphoSite:Q9WV86 PRIDE:Q9WV86 UCSC:uc007eii.2 InParanoid:Q9WV86
EvolutionaryTrace:Q9WV86 CleanEx:MM_KATNA1 Genevestigator:Q9WV86
GermOnline:ENSMUSG00000019794 Uniprot:Q9WV86
Length = 491
Score = 459 (166.6 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 122/360 (33%), Positives = 191/360 (53%)
Query: 594 PRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAM 653
P++LH D G + + E K ++ L A V + + T +DLV+A+
Sbjct: 141 PQNLHN---DRGKAVRSREKKEQSKGREEKNKLPAAVTEPEANKFDGTGY--DKDLVEAL 195
Query: 654 ERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLL 713
ER + PNV+W D+ L + KK + + V LP+ + F R GVL+
Sbjct: 196 ERDI--------ISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGIRRPWKGVLM 247
Query: 714 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 773
GPPGTGKTLLAKAVATEC F +V L + Y GESEK VR +F+ AR P IF
Sbjct: 248 VGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFI 307
Query: 774 DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLID 827
DE+DS+ RG S + R+ +++L ++DG+ +D S+ + ++ A+N P ID
Sbjct: 308 DEIDSICSRRGTS-EEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDID 366
Query: 828 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 887
AL R R +K +Y+ + S RE +L+ R+ +L +DV+L SIA+ ++GAD+
Sbjct: 367 EALRR--RLEKRIYIPLPS-AKGREELLRISLRELELADDVNLASIAENME-GYSGADIT 422
Query: 888 ALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
+C DA A +R++ +A + +DF L+++S S+S A++++YE
Sbjct: 423 NVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTTMEDFEMALKKISKSVSAADIERYE 482
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 492 (178.3 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 99/233 (42%), Positives = 157/233 (67%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
+VPN+ +++G L+ +KK + LP+ + +++ G+ K G+LLYGPPG GKT+LAK
Sbjct: 669 EVPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAK 728
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
A++ E NF+++KGPE++N Y+GESEK VR+IF A +PC+IFFDE+DS+ R ++
Sbjct: 729 AISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICINR-SN 787
Query: 787 GDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
S DRVV+Q+L+E+DGL+ + ++II +NRPD+ID ALLR GRFD+L+Y+ +
Sbjct: 788 NKSVSASDRVVNQLLSEMDGLSQR-EGVYIIATTNRPDIIDKALLRSGRFDQLIYISLPK 846
Query: 847 DVSYRERV--LKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
Y+ RV LK L++ + ++V I+K ++GAD+Y + ++ F A
Sbjct: 847 ---YQGRVDILKKLSKNMPIDKNVRFEEISK-LTRGYSGADLYGVLRESAFIA 895
Score = 128 (50.1 bits), Expect = 0.00047, P = 0.00047
Identities = 51/203 (25%), Positives = 91/203 (44%)
Query: 591 GFMPRDLHALVADAGA-NLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDL 649
G P D+ D N K+N +K + + K N S + Q+ +
Sbjct: 170 GHDPNDVLLNEKDLNVGNEFIKNNMLKNKKKLKIIEGKLKDEKNVQSHLTNNQINENMNH 229
Query: 650 VKAME-RSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKR 708
+K +S N++ + + N D G++++KK IL ++ P +K S+
Sbjct: 230 MKQEHNKSSFNNSNKIINSIISNKTLNDFKGIKNIKKDILYSIIYP--YKFRLSN---LN 284
Query: 709 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN--VRDIFQKARSA 766
+ ++G GTGKT L+ A+A EC F +K PE I YI KN +R +F+ ++
Sbjct: 285 CIINIFGTSGTGKTTLSYAIAGECGCPFFYIKLPEYIK-YISNDNKNNKLRILFEHIKNE 343
Query: 767 RP-CVIFFDELDSLAPARGASGD 788
++ D++D + ++ S D
Sbjct: 344 YDKAILCIDDIDIIFSSKDDSTD 366
Score = 43 (20.2 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 611 KSNSEVDKNEPGESDLTAKVAHNDNSSIAATQV 643
K N ++ +E ++ L + ND + IA+T++
Sbjct: 561 KQNDQLTSHE--QNILITSIKTNDENQIASTEI 591
Score = 39 (18.8 bits), Expect = 4.2e-42, Sum P(2) = 4.2e-42
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 656 SKKRNASALGAPKVPNVKWEDVGGLEDVKKS 686
+ NAS G K N +++V E++K++
Sbjct: 533 NNNNNASVWGYTKSDNDFFKNVTNYEEIKQN 563
>UNIPROTKB|E2R3K3 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001578 "microtubule bundle
formation" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0005811
GO:GO:0030424 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0031122
KO:K07767 GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK
GO:GO:0051329 EMBL:AAEX03000265 RefSeq:XP_533445.1
ProteinModelPortal:E2R3K3 Ensembl:ENSCAFT00000000603 GeneID:476240
KEGG:cfa:476240 Uniprot:E2R3K3
Length = 491
Score = 458 (166.3 bits), Expect = 2.0e-42, P = 2.0e-42
Identities = 121/356 (33%), Positives = 189/356 (53%)
Query: 598 HALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSK 657
H L D G + + E +K ++ A V + S +T +DLV+A+ER
Sbjct: 142 HNLHNDRGKAVRCREKKEQNKGREEKNKSPAAVTEPETSKFDSTGY--DKDLVEALERDI 199
Query: 658 KRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPP 717
+ PNV+W+D+ L + KK + + V LP+ + F R GVL+ GPP
Sbjct: 200 --------ISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPP 251
Query: 718 GTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELD 777
GTGKTLLAKAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+D
Sbjct: 252 GTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEID 311
Query: 778 SLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALL 831
S+ RG S + RV +++L ++DG+ +D S+ + ++ A+N P ID AL
Sbjct: 312 SICSRRGTS-EEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALR 370
Query: 832 RPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCA 891
R R +K +Y+ + S RE +L+ R+ +L +DV+L SIA+ ++GAD+ +C
Sbjct: 371 R--RLEKRIYIPLPS-AKGREELLRISLRELELADDVNLASIAENME-GYSGADITNVCR 426
Query: 892 DAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
DA A +R++ + + +DF L+++S S+S A++++YE
Sbjct: 427 DASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 445 (161.7 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 99/245 (40%), Positives = 155/245 (63%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E VGGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 135 SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTG 194
Query: 721 KTLLAKAVA--TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 778
KTLLA+AVA TEC+ F+ V G EL+ +IGE + VR++F AR P +IF DE+DS
Sbjct: 195 KTLLARAVAHHTECT--FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDS 252
Query: 779 LAPARGASGDSG-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD 837
+ +R SG G + R + ++L ++DG ++++++ +I A+NR D++DPALLRPGR D
Sbjct: 253 IGSSRIESGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDPALLRPGRID 311
Query: 838 -KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFH 896
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +
Sbjct: 312 RKIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMY 368
Query: 897 AAKRK 901
A + +
Sbjct: 369 ALRER 373
Score = 38 (18.4 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
D+ +N+ N+ PN +V L +E
Sbjct: 97 DLDKNIDINDVTPNCRVALRNE 118
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 443 (161.0 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 212 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 271
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 272 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 331
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 332 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 387
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 388 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 445
Score = 40 (19.1 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 134 PPTTRKQVCDGDVHSKHSSPTMLTFPSI 161
PP TRK +C+ H+ P L P +
Sbjct: 22 PPETRKVLCN------HTGPEALGAPKM 43
Score = 39 (18.8 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 663 ALGAPKVPN 671
ALGAPK+P+
Sbjct: 37 ALGAPKMPD 45
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 456 (165.6 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 96/243 (39%), Positives = 150/243 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + K+P+ ++ VGGL+ K I + ++LP+ H +LF S G+ + GVLLYGPPGTG
Sbjct: 132 SLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTG 191
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+
Sbjct: 192 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIG 251
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDK 838
+RG SG GG + R + ++L ++DG +S++++ ++ +NR D++DPALLRPGR D+
Sbjct: 252 SSRGESGSGGGDSEVQRTMLELLNQLDGF-ESTKNIKVLMCTNRIDILDPALLRPGRIDR 310
Query: 839 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAA 898
+ D R +LK +RK L ++L I+ K +GA++ A+C +A +A
Sbjct: 311 KIEFPNPGDAG-RLDILKIHSRKMNLTRGINLKKISDKMN-GASGAELKAVCTEAGMYAL 368
Query: 899 KRK 901
+ +
Sbjct: 369 RER 371
>UNIPROTKB|Q1HGK7 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9031 "Gallus gallus" [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051013 "microtubule severing"
evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005819 "spindle" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 eggNOG:COG0464 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 EMBL:DQ486889 IPI:IPI00786289
RefSeq:NP_001038113.1 UniGene:Gga.12204 ProteinModelPortal:Q1HGK7
Ensembl:ENSGALT00000020211 GeneID:421626 KEGG:gga:421626 CTD:11104
InParanoid:Q1HGK7 OMA:SQYSDPK OrthoDB:EOG4CJVGZ NextBio:20824364
GO:GO:0051329 Uniprot:Q1HGK7
Length = 492
Score = 456 (165.6 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 119/346 (34%), Positives = 191/346 (55%)
Query: 610 RKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKV 669
R+ + +K + +S T++++ ++ +T +DLV+A+ER +
Sbjct: 155 REKKDQQNKGKEEKSKSTSEISESEPKKFDSTGY--DKDLVEALERDI--------ISQN 204
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 729
PN++W+D+ L + KK + + V LP+ + F R GVL+ GPPGTGKTLLAKAVA
Sbjct: 205 PNIRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVA 264
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
TEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S +
Sbjct: 265 TECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS-EE 323
Query: 790 GGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVG 843
RV +++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y+
Sbjct: 324 HEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIP 381
Query: 844 VNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV- 902
+ S RE +L+ R+ +L +DV L +IA+K ++GAD+ +C DA A +R++
Sbjct: 382 LPS-AKGREELLRINLRELELADDVDLANIAEKME-GYSGADITNVCRDASLMAMRRRIE 439
Query: 903 -LXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
L R + +E DF L+++S S+S A+++KYE
Sbjct: 440 GLTPEEIRNLSRDEMHMPTTME--DFEIALKKVSKSVSAADIEKYE 483
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 456 (165.6 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 126/370 (34%), Positives = 203/370 (54%)
Query: 545 SHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQTSGFMPRDLHALVADA 604
+HE + P EQ+ E ++L + T + E ++ + F+ +L L+ +
Sbjct: 14 THESGIKPYFEQKIQE--TEL--KIRSKTENVRRLEAQRNALNDKVRFIKDELR-LLQEP 68
Query: 605 GA---NLIR-KSNSEV-DKNEPGESDLTAKVAHNDN-SSIAATQ-VMGKED---LVKAME 654
G+ +I+ S+ +V K +P E VA + N + A+Q V + D L K +E
Sbjct: 69 GSYVGEVIKIVSDKKVLVKVQP-EGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLE 127
Query: 655 RSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLL 713
S + KVP+ ++ VGGL K I + ++LP+ H +LF S G+ + GV+L
Sbjct: 128 NKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVIL 187
Query: 714 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 773
YGPPGTGKTLLA+AVA F+ V G EL+ YIGE + VR++F AR P +IF
Sbjct: 188 YGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFM 247
Query: 774 DELDSLAPARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALL 831
DE+DS+ R G GG + R + ++L ++DG ++S+++ II A+NR D++DPALL
Sbjct: 248 DEIDSIGSTR-VEGSGGGDSEVQRTMLELLNQLDGF-ETSKNIKIIMATNRLDILDPALL 305
Query: 832 RPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCA 891
RPGR D+ + S V+ R +L+ +RK L ++L +A+K +GAD+ +C
Sbjct: 306 RPGRIDRKIEFPPPS-VAARAEILRIHSRKMNLTRGINLRKVAEKMN-GCSGADVKGVCT 363
Query: 892 DAWFHAAKRK 901
+A +A + +
Sbjct: 364 EAGMYALRER 373
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 472 (171.2 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 108/278 (38%), Positives = 163/278 (58%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P V ++ +GGL K+I +TV+LPL +LF S G+ GVLLYGPPGTGKTL+AKA+
Sbjct: 313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGD 788
A E + + GPE+I+ + GESE +R IF +A RP +IF DELD+L P R G
Sbjct: 373 ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKR--EGA 430
Query: 789 SGGVMDRVVSQMLAEIDGLNDSSQD--LFIIGASNRPDLIDPALLRPGRFDKLLYVGVNS 846
V RVV+ +L +DG+ + L ++GA+NRP +D AL RPGRFDK + +G+
Sbjct: 431 QNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGI-P 489
Query: 847 DVSYRERVLKALTRKFK-LLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLXX 905
+ R +L+ L +K L + +A + GAD+ ALC +A +A +R L
Sbjct: 490 NAQDRLDILQKLLKKVPHSLTAAEMMQLADSAH-GYVGADLAALCKEAGLYALRR-ALGK 547
Query: 906 XXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAEL 943
+ A SV++ ++DF++ ++++ PS +M E+
Sbjct: 548 RAHPSDTEV--AGSVMIAFNDFLQGMKDVRPS-AMREV 582
Score = 385 (140.6 bits), Expect = 8.9e-37, Sum P(2) = 8.9e-37
Identities = 85/197 (43%), Positives = 120/197 (60%)
Query: 591 GFMPRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLV 650
G++ DL AL +AG +R++ K AH ++ +A + ++ D +
Sbjct: 523 GYVGADLAALCKEAGLYALRRA--------------LGKRAHPSDTEVAGSVMIAFNDFL 568
Query: 651 KAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLF-SSGLRKRS 709
+ M + + +A A VP V W D+GGLEDVK + V+ PL H D F G++
Sbjct: 569 QGM-KDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPK 627
Query: 710 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPC 769
GVLLYGPPG KT++AKA+A E LNFL+VKGPEL+N Y+GESE+ VR+IF+KAR P
Sbjct: 628 GVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPS 687
Query: 770 VIFFDELDSLAPARGAS 786
++FFDE+D+LA RG S
Sbjct: 688 ILFFDEIDALAVERGNS 704
Score = 90 (36.7 bits), Expect = 8.9e-37, Sum P(2) = 8.9e-37
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
VLL+G PG GK + + +A +G HV + +++ ++ + L Q F A P+I
Sbjct: 355 VLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSI 414
Query: 460 LLLRDFD 466
+ + + D
Sbjct: 415 IFIDELD 421
Score = 43 (20.2 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 470 NLVSNESLPNDQVGLSSEVASVIREFTEPSAEDEDEE 506
N+V + D V L ++ ++ E EP E D E
Sbjct: 160 NVVVMKVKGTDSVELHAQAGAISSEVCEPDLEKSDLE 196
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 435 (158.2 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 96/243 (39%), Positives = 141/243 (58%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + K P + D+GGLE + I + V+LPL H +L+ G++ GV+LYGPPGTG
Sbjct: 180 SVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTG 239
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLAKAVA E S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++
Sbjct: 240 KTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVG 299
Query: 781 PARGASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDK 838
R SGG + R + ++L ++DG DS D+ +I A+NR D +DPAL+RPGR D+
Sbjct: 300 TKR-YEATSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIDSLDPALIRPGRIDR 357
Query: 839 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAA 898
+ + N D + R+ + T K + DV L +GAD+ A+C +A A
Sbjct: 358 KIQLP-NPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMS-KDELSGADIKAICTEAGLLAL 415
Query: 899 KRK 901
+ +
Sbjct: 416 RER 418
Score = 47 (21.6 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 650 VKAMERSKKRNASALGAPKVPNV 672
+ M + KK+N G K+PNV
Sbjct: 39 ISHMGKKKKKNKGTSGHSKLPNV 61
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 435 (158.2 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 96/243 (39%), Positives = 141/243 (58%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + K P + D+GGLE + I + V+LPL H +L+ G++ GV+LYGPPGTG
Sbjct: 180 SVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTG 239
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLAKAVA E S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++
Sbjct: 240 KTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVG 299
Query: 781 PARGASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDK 838
R SGG + R + ++L ++DG DS D+ +I A+NR D +DPAL+RPGR D+
Sbjct: 300 TKR-YEATSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIDSLDPALIRPGRIDR 357
Query: 839 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAA 898
+ + N D + R+ + T K + DV L +GAD+ A+C +A A
Sbjct: 358 KIQLP-NPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMS-KDELSGADIKAICTEAGLLAL 415
Query: 899 KRK 901
+ +
Sbjct: 416 RER 418
Score = 47 (21.6 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 650 VKAMERSKKRNASALGAPKVPNV 672
+ M + KK+N G K+PNV
Sbjct: 39 ISHMGKKKKKNKGTSGHSKLPNV 61
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 416 (151.5 bits), Expect = 3.9e-42, Sum P(3) = 3.9e-42
Identities = 88/231 (38%), Positives = 141/231 (61%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
N+ + VGGL D + + ++++LPL++ +LF G++ GVLLYGPPGTGKTLLA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
+ NFL V +I+ YIGES + +R++F AR +PC+IF DE+D++ R + G S
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 790 GG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
+ R + ++L ++DG D+ + +I A+NRPD++DPALLRPGR D+ + + + ++
Sbjct: 255 ADREIQRTLMELLNQLDGF-DNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
S R +LK ++ Y K F GAD+ +C +A A +
Sbjct: 314 S-RMDILKIHAAGIAKHGEID-YEAIVKLAEGFNGADLRNICTEAGMFAIR 362
Score = 44 (20.5 bits), Expect = 3.9e-42, Sum P(3) = 3.9e-42
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 23 IDSMVERRKPLVLS-STKLLINSVLSSSRRVTGENLVG 59
+D V RR V KLL + L S R ENL G
Sbjct: 4 VDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRG 41
Score = 43 (20.2 bits), Expect = 3.9e-42, Sum P(3) = 3.9e-42
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 916 QADSVVVEYDDFVKVLRELSPSLSMAELKKY 946
+A+ V ++DF+K +R+LS + + Y
Sbjct: 362 RAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
>UNIPROTKB|E1BSZ5 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:AADN02005228
IPI:IPI00589186 RefSeq:XP_417114.1 UniGene:Gga.16694
ProteinModelPortal:E1BSZ5 PRIDE:E1BSZ5 Ensembl:ENSGALT00000027595
GeneID:418920 KEGG:gga:418920 NextBio:20822044 Uniprot:E1BSZ5
Length = 489
Score = 455 (165.2 bits), Expect = 4.3e-42, P = 4.3e-42
Identities = 119/318 (37%), Positives = 176/318 (55%)
Query: 647 EDLVKAMERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGL 705
+DLV+A+ER RN P++ W+D+ LE+ KK + + V LP+ D F
Sbjct: 187 KDLVEALERDIVSRN---------PSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR 237
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
R GVL+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 238 RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARF 297
Query: 766 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGA 819
P IF DE+DS+ RG S D RV S++L ++DG+ +D S+ + ++ A
Sbjct: 298 YAPATIFIDEIDSICSRRGTS-DEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAA 356
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
+N P ID AL R R +K +Y+ + + R +LK R+ +L D+SL IA+K
Sbjct: 357 TNFPWDIDEALRR--RLEKRIYIPLPT-AKGRAELLKINLREVELDPDISLEEIAEKIE- 412
Query: 880 NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLS 939
++GAD+ +C DA A +R++ + + V DF L+++S S+S
Sbjct: 413 GYSGADITNVCRDASLMAMRRRINGLTPEEIRALSKEELQMPVTKGDFELALKKISKSVS 472
Query: 940 MAELKKYELLRDQFEGSS 957
A+L+KYE +F GS+
Sbjct: 473 AADLEKYEKWMAEF-GSA 489
>UNIPROTKB|O61577 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:7668 "Strongylocentrotus purpuratus" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AF052191 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568
GO:GO:0000922 GO:GO:0005874 KO:K07767 HAMAP:MF_03023 CTD:11104
RefSeq:NP_999733.1 UniGene:Spu.26881 ProteinModelPortal:O61577
STRING:O61577 GeneID:373368 KEGG:spu:373368 InParanoid:O61577
Uniprot:O61577
Length = 516
Score = 455 (165.2 bits), Expect = 4.3e-42, P = 4.3e-42
Identities = 126/371 (33%), Positives = 190/371 (51%)
Query: 594 PRDLHALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKE-DLVKA 652
P D G S+ DKN G+SD K + G + DLV+
Sbjct: 160 PSDRRGDARSGGGGRGGARGSDKDKNRGGKSDKDKKAPSGEEGDEKKFDPAGYDKDLVEN 219
Query: 653 MERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGV 711
+ER +RN PNV W D+ GL + K+ + + V LPL D F R GV
Sbjct: 220 LERDIVQRN---------PNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFKGIRRPWKGV 270
Query: 712 LLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVI 771
L+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR P I
Sbjct: 271 LMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTI 330
Query: 772 FFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN------DSSQDLFIIGASNRPDL 825
F DE+DS+ RG +G RV S++L ++DG++ +SS+ + ++ A+N P
Sbjct: 331 FIDEIDSICSKRG-TGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWD 389
Query: 826 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGAD 885
ID AL R R +K +Y+ + ++ RE++L+ ++ L +D+ L SIA+K ++GAD
Sbjct: 390 IDEALRR--RLEKRIYIPL-PEIDGREQLLRINLKEVPLADDIDLKSIAEKMD-GYSGAD 445
Query: 886 MYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKK 945
+ +C DA A +R++ + + DF+ L+++S S+ +L K
Sbjct: 446 ITNVCRDASMMAMRRRIQGLRPEEIRHIPKEELNQPSTPADFLLALQKVSKSVGKEDLVK 505
Query: 946 YELLRDQFEGS 956
Y ++F GS
Sbjct: 506 YMAWMEEF-GS 515
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 435 (158.2 bits), Expect = 4.8e-42, Sum P(2) = 4.8e-42
Identities = 91/239 (38%), Positives = 150/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG +D + + + V+LPLL + F++ G+ G+LLYGPPGTGKTL A+AV
Sbjct: 204 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 263
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGA 323
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRP+ +DPALLRPGR D+ + +
Sbjct: 324 GGDNE--VQRTMLELITQLDGF-DPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSL- 379
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + + ++ + + I++ CP N TGA++ ++C +A A A+RKV
Sbjct: 380 PDLEGRANIFRIHSKSMSVERGIRWELISRLCP-NSTGAELRSVCTEAGMFAIRARRKV 437
Score = 46 (21.3 bits), Expect = 4.8e-42, Sum P(2) = 4.8e-42
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 500 AEDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTIRRC-FSHEISMGPLTEQQR 558
A+++DE++ +K+I K V+ D EG+ + R ++ E+ + P +
Sbjct: 136 ADEDDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPS- 194
Query: 559 VEMLSQLLQPVSELT-SDTG 577
V M++ +P ++T SD G
Sbjct: 195 VTMMTVEEKP--DVTYSDVG 212
>RGD|1303062 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=ISO;ISS] [GO:0001578 "microtubule bundle formation"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005811 "lipid particle" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005819 "spindle"
evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0007067 "mitosis"
evidence=TAS] [GO:0008017 "microtubule binding" evidence=IEA;ISO]
[GO:0008104 "protein localization" evidence=ISO;TAS] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISO;TAS] [GO:0030424 "axon"
evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA;ISO] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing"
evidence=ISO;IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1303062
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 GO:GO:0043025 GO:GO:0016887
GO:GO:0030426 eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0010977
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 BRENDA:3.6.4.3 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AY621629 EMBL:BC097929
IPI:IPI00363811 RefSeq:NP_001004217.2 UniGene:Rn.47464
ProteinModelPortal:Q6E0V2 STRING:Q6E0V2 PRIDE:Q6E0V2
Ensembl:ENSRNOT00000020417 GeneID:292464 KEGG:rno:292464
UCSC:RGD:1303062 InParanoid:Q6E0V2 NextBio:634169
Genevestigator:Q6E0V2 GermOnline:ENSRNOG00000014996 Uniprot:Q6E0V2
Length = 491
Score = 454 (164.9 bits), Expect = 5.5e-42, P = 5.5e-42
Identities = 120/355 (33%), Positives = 189/355 (53%)
Query: 599 ALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKK 658
+L +D G + + E K ++ L A V + + +T +DLV+A+ER
Sbjct: 143 SLHSDRGKAVRSREKKEQSKGREEKNKLPAAVTEPEANKFDSTGY--DKDLVEALERDI- 199
Query: 659 RNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPG 718
+ PNV+W D+ L + KK + + V LP+ + F R GVL+ GPPG
Sbjct: 200 -------ISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGIRRPWKGVLMVGPPG 252
Query: 719 TGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 778
TGKTLLAKAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS
Sbjct: 253 TGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDS 312
Query: 779 LAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLR 832
+ RG S + RV +++L ++DG+ +D S+ + ++ A+N P ID AL R
Sbjct: 313 ICSRRGTS-EEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR 371
Query: 833 PGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCAD 892
R +K +Y+ + S RE +L+ R+ +L +DV+L SIA+ ++GAD+ +C D
Sbjct: 372 --RLEKRIYIPLPS-AKGREELLRISLRELELADDVNLASIAENME-GYSGADITNVCRD 427
Query: 893 AWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
A A +R++ + + +DF L+++S S+S A++++YE
Sbjct: 428 ASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 475 (172.3 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 97/217 (44%), Positives = 148/217 (68%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
L+KA++ K L +P +++D+GG + VK+ I + + P +K+++ +
Sbjct: 810 LLKALKYVKPSGMKELYID-IPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIES 868
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
G+LLYGPPG KTL AKA+A+E +NF+SVKGPE+ + Y+GESEK++R+IF+KAR
Sbjct: 869 PKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENH 928
Query: 768 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 827
PCVIFFDE+DS+A R + + V +RV+ Q+L EIDG+ + ++ I+ A+NRPDLID
Sbjct: 929 PCVIFFDEIDSIAVNR--NNNQNFVSNRVLCQLLNEIDGIKNRL-NVIILAATNRPDLID 985
Query: 828 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL 864
PAL+RPGRFD+++YV + + S R +LK + FK+
Sbjct: 986 PALMRPGRFDRIIYVPL-PNYSSRFAILKKNLKFFKI 1021
Score = 114 (45.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 630 VAHNDNSSIAATQ-VMGKEDLVKA---MERSKKRNASALGAPKVPNVKWEDVGGLEDVKK 685
++++D ++ + ++ K D K + KK N + K +GG +K+
Sbjct: 375 ISNDDIKNVVDDKHIINKYDKEKTNINSDHMKKLNLKKMVVNKKEKKGLNKLGGYNKIKE 434
Query: 686 SILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSL 734
I + +PL++K ++ + + G+LL+GPPG GKT +A + E SL
Sbjct: 435 DIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEELSL 484
Score = 106 (42.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 44/175 (25%), Positives = 88/175 (50%)
Query: 739 VKGPELINMYIGESEKNVRDIF----QKARSARPC-VIFFDELDSLAPARGASGDSGGVM 793
+K +LI+ Y K + ++F ++ + C +IF DE++ L R + + M
Sbjct: 524 LKSTDLID-YNNTGYK-INELFLRCHKRYQEENKCTIIFIDEIEILCKKREENNN----M 577
Query: 794 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 853
+ S +L +DG+ + + +IGA+N + ID AL R GRFDK + V + + ++R
Sbjct: 578 NIYTSVLLNNMDGIKKHTHTI-LIGATNYINKIDLALRRSGRFDKEIEVNLPN---LKDR 633
Query: 854 VLKALTRKFKLLED----VSLYSIAKKCPPNFTGADMYALCADAWF-HAAKRKVL 903
+ +K L++ ++ +A C +FT +D+ +L + F + + K++
Sbjct: 634 I-SIFQKKLNLIKHNIGKKKIHKLADLCQ-SFTCSDINSLINISMFLNLKENKII 686
Score = 63 (27.2 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LLHG PGCGK + + L + ++ C ++ KTS L N +
Sbjct: 461 ILLHGPPGCGKTYIALLIKEELSLLKKKF-C----TITQNKTSKQLNNTKNDNNYNNDDN 515
Query: 460 LLLRDFDVFRN 470
+++ + ++ ++
Sbjct: 516 IIIPEIEILKS 526
Score = 38 (18.4 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 861 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 893
K+ ++ + L + K ++GA++ +C +A
Sbjct: 1100 KYTDIKFIKLCHVLAKKTKKYSGAEIVNICREA 1132
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 475 (172.3 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 97/217 (44%), Positives = 148/217 (68%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
L+KA++ K L +P +++D+GG + VK+ I + + P +K+++ +
Sbjct: 810 LLKALKYVKPSGMKELYID-IPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIES 868
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
G+LLYGPPG KTL AKA+A+E +NF+SVKGPE+ + Y+GESEK++R+IF+KAR
Sbjct: 869 PKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENH 928
Query: 768 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLID 827
PCVIFFDE+DS+A R + + V +RV+ Q+L EIDG+ + ++ I+ A+NRPDLID
Sbjct: 929 PCVIFFDEIDSIAVNR--NNNQNFVSNRVLCQLLNEIDGIKNRL-NVIILAATNRPDLID 985
Query: 828 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKL 864
PAL+RPGRFD+++YV + + S R +LK + FK+
Sbjct: 986 PALMRPGRFDRIIYVPL-PNYSSRFAILKKNLKFFKI 1021
Score = 114 (45.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 630 VAHNDNSSIAATQ-VMGKEDLVKA---MERSKKRNASALGAPKVPNVKWEDVGGLEDVKK 685
++++D ++ + ++ K D K + KK N + K +GG +K+
Sbjct: 375 ISNDDIKNVVDDKHIINKYDKEKTNINSDHMKKLNLKKMVVNKKEKKGLNKLGGYNKIKE 434
Query: 686 SILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSL 734
I + +PL++K ++ + + G+LL+GPPG GKT +A + E SL
Sbjct: 435 DIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEELSL 484
Score = 106 (42.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 44/175 (25%), Positives = 88/175 (50%)
Query: 739 VKGPELINMYIGESEKNVRDIF----QKARSARPC-VIFFDELDSLAPARGASGDSGGVM 793
+K +LI+ Y K + ++F ++ + C +IF DE++ L R + + M
Sbjct: 524 LKSTDLID-YNNTGYK-INELFLRCHKRYQEENKCTIIFIDEIEILCKKREENNN----M 577
Query: 794 DRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRER 853
+ S +L +DG+ + + +IGA+N + ID AL R GRFDK + V + + ++R
Sbjct: 578 NIYTSVLLNNMDGIKKHTHTI-LIGATNYINKIDLALRRSGRFDKEIEVNLPN---LKDR 633
Query: 854 VLKALTRKFKLLED----VSLYSIAKKCPPNFTGADMYALCADAWF-HAAKRKVL 903
+ +K L++ ++ +A C +FT +D+ +L + F + + K++
Sbjct: 634 I-SIFQKKLNLIKHNIGKKKIHKLADLCQ-SFTCSDINSLINISMFLNLKENKII 686
Score = 63 (27.2 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 400 VLLHGLPGCGKRTVVRYVARRLGIHVVEYSCHNLMASSERKTSAALAQAFNTAQSYSPTI 459
+LLHG PGCGK + + L + ++ C ++ KTS L N +
Sbjct: 461 ILLHGPPGCGKTYIALLIKEELSLLKKKF-C----TITQNKTSKQLNNTKNDNNYNNDDN 515
Query: 460 LLLRDFDVFRN 470
+++ + ++ ++
Sbjct: 516 IIIPEIEILKS 526
Score = 38 (18.4 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 861 KFKLLEDVSLYSIAKKCPPNFTGADMYALCADA 893
K+ ++ + L + K ++GA++ +C +A
Sbjct: 1100 KYTDIKFIKLCHVLAKKTKKYSGAEIVNICREA 1132
>UNIPROTKB|E1BH39 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0005811 GO:GO:0030424
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0031122 KO:K07767
GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK GO:GO:0051329
EMBL:DAAA02027051 IPI:IPI00706925 RefSeq:NP_001179032.1
UniGene:Bt.41985 ProteinModelPortal:E1BH39
Ensembl:ENSBTAT00000001172 GeneID:506715 KEGG:bta:506715
NextBio:20867726 Uniprot:E1BH39
Length = 491
Score = 452 (164.2 bits), Expect = 9.1e-42, P = 9.1e-42
Identities = 119/356 (33%), Positives = 187/356 (52%)
Query: 598 HALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSK 657
H L D G + + E +K ++ A + + +T +DLV+A+ER
Sbjct: 142 HNLHNDRGKAVRSREKKEQNKGREEKNKSPAAATEPETNKFDSTGY--DKDLVEALERDI 199
Query: 658 KRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPP 717
+ PNV+W+D+ L + KK + + V LP+ + F R GVL+ GPP
Sbjct: 200 --------ISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPP 251
Query: 718 GTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELD 777
GTGKTLLAKAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+D
Sbjct: 252 GTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEID 311
Query: 778 SLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALL 831
S+ RG S + RV +++L ++DG+ +D S+ + ++ A+N P ID AL
Sbjct: 312 SICSRRGTS-EEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALR 370
Query: 832 RPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCA 891
R R +K +Y+ + S RE +L+ R+ +L +DV L SIA+ ++GAD+ +C
Sbjct: 371 R--RLEKRIYIPLPS-AKGREELLRISLRELELADDVDLASIAENME-GYSGADITNVCR 426
Query: 892 DAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
DA A +R++ + + +DF L+++S S+S A++++YE
Sbjct: 427 DASLMAMRRRIEGLTPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>ZFIN|ZDB-GENE-041114-141 [details] [associations]
symbol:katnal1 "katanin p60 subunit A-like 1"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-041114-141 GO:GO:0005524 GO:GO:0005737 HSSP:Q01853
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 EMBL:BC085416 IPI:IPI00492461
RefSeq:NP_001007432.1 UniGene:Dr.11082 ProteinModelPortal:Q5U3S1
PRIDE:Q5U3S1 GeneID:492790 KEGG:dre:492790 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX NextBio:20865289 HAMAP:MF_03023 HAMAP:MF_03024
Uniprot:Q5U3S1
Length = 488
Score = 452 (164.2 bits), Expect = 9.1e-42, P = 9.1e-42
Identities = 119/316 (37%), Positives = 169/316 (53%)
Query: 648 DLVKAMERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLR 706
DLV A+ER RN PN+ W+D+ LED KK + + V LP+ D F R
Sbjct: 187 DLVDALERDIVSRN---------PNIHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRR 237
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
GVL+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 238 PWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY 297
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN------DSSQDLFIIGAS 820
P IF DE+DS+ RG S D RV S++L ++DG+ D S+ + ++ A+
Sbjct: 298 APTTIFIDEIDSICGRRGTS-DEHEASRRVKSELLVQMDGVGGAQESEDPSKMVMVLAAT 356
Query: 821 NRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPN 880
N P ID AL R R +K +Y+ + + R +LK R+ + DV L A+K
Sbjct: 357 NFPWDIDEALRR--RLEKRIYIPLPT-AKGRAELLKINLREVDVASDVDLTVFAEKIE-G 412
Query: 881 FTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSM 940
++GAD+ +C DA A +R++ + V +DF L+++S S+S
Sbjct: 413 YSGADITNVCRDASMMAMRRRIQGLSPEEIRALSKDELQMPVTMEDFELALKKISKSVSA 472
Query: 941 AELKKYELLRDQFEGS 956
A+L+KYE +F GS
Sbjct: 473 ADLEKYESWMSEF-GS 487
>UNIPROTKB|O75449 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IDA]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0051329
"interphase of mitotic cell cycle" evidence=IMP] [GO:0000922
"spindle pole" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
[GO:0005819 "spindle" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
Pathway_Interaction_DB:lis1pathway GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 EMBL:CH471051 GO:GO:0030424
GO:GO:0043025 GO:GO:0030426 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 GO:GO:0031122
HOVERGEN:HBG057074 GO:GO:0010977 EMBL:AL078581 KO:K07767
HAMAP:MF_03023 HOGENOM:HOG000225142 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AF056022 EMBL:BX276089
EMBL:BC050428 IPI:IPI00013075 IPI:IPI00384339 RefSeq:NP_001191005.1
RefSeq:NP_008975.1 UniGene:Hs.450175 ProteinModelPortal:O75449
SMR:O75449 STRING:O75449 PhosphoSite:O75449 PaxDb:O75449
PRIDE:O75449 Ensembl:ENST00000335643 Ensembl:ENST00000335647
Ensembl:ENST00000367411 GeneID:11104 KEGG:hsa:11104 UCSC:uc003qmr.2
UCSC:uc003qmt.3 GeneCards:GC06M149957 HGNC:HGNC:6216 HPA:HPA036207
MIM:606696 neXtProt:NX_O75449 PharmGKB:PA30017 InParanoid:O75449
ChiTaRS:KATNA1 GenomeRNAi:11104 NextBio:42220 ArrayExpress:O75449
Bgee:O75449 CleanEx:HS_KATNA1 Genevestigator:O75449 Uniprot:O75449
Length = 491
Score = 450 (163.5 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 118/351 (33%), Positives = 186/351 (52%)
Query: 603 DAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNAS 662
D G + + E +K ++ A V + + +T +DLV+A+ER
Sbjct: 147 DRGKAVRCREKKEQNKGREEKNKSPAAVTEPETNKFDSTGY--DKDLVEALERDI----- 199
Query: 663 ALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKT 722
+ PNV+W+D+ L + KK + + V LP+ + F R GVL+ GPPGTGKT
Sbjct: 200 ---ISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKT 256
Query: 723 LLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPA 782
LLAKAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+
Sbjct: 257 LLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSR 316
Query: 783 RGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRF 836
RG S + RV +++L ++DG+ +D S+ + ++ A+N P ID AL R R
Sbjct: 317 RGTS-EEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RL 373
Query: 837 DKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFH 896
+K +Y+ + S RE +L+ R+ +L +DV L SIA+ ++GAD+ +C DA
Sbjct: 374 EKRIYIPLPS-AKGREELLRISLRELELADDVDLASIAENME-GYSGADITNVCRDASLM 431
Query: 897 AAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
A +R++ + + +DF L+++S S+S A++++YE
Sbjct: 432 AMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>UNIPROTKB|Q4R407 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9541 "Macaca fascicularis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815 HSSP:Q01853
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AB179108
ProteinModelPortal:Q4R407 Uniprot:Q4R407
Length = 491
Score = 450 (163.5 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 118/351 (33%), Positives = 186/351 (52%)
Query: 603 DAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNAS 662
D G + + E +K ++ A V + + +T +DLV+A+ER
Sbjct: 147 DRGKAVRCREKKEQNKGREEKNKSPAAVTEPETNKFDSTGY--DKDLVEALERDI----- 199
Query: 663 ALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKT 722
+ PNV+W+D+ L + KK + + V LP+ + F R GVL+ GPPGTGKT
Sbjct: 200 ---ISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKT 256
Query: 723 LLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPA 782
LLAKAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+
Sbjct: 257 LLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSR 316
Query: 783 RGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRF 836
RG S + RV +++L ++DG+ +D S+ + ++ A+N P ID AL R R
Sbjct: 317 RGTS-EEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RL 373
Query: 837 DKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFH 896
+K +Y+ + S RE +L+ R+ +L +DV L SIA+ ++GAD+ +C DA
Sbjct: 374 EKRIYIPLPS-AKGREELLRISLRELELADDVDLASIAENME-GYSGADITNVCRDASLM 431
Query: 897 AAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
A +R++ + + +DF L+++S S+S A++++YE
Sbjct: 432 AMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYE 482
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 449 (163.1 bits), Expect = 1.9e-41, P = 1.9e-41
Identities = 95/239 (39%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ ARS + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + G+
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D R + K R + D+ +A+ CP N TGA++ ++C +A A A+RKV
Sbjct: 346 PDQDGRSHIFKIHARSMSVERDIRFDLLARLCP-NSTGAEIRSVCTEAGMFAIRARRKV 403
>UNIPROTKB|Q0IIR9 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 CTD:11104 EMBL:BC121679
RefSeq:NP_001072433.1 UniGene:Str.53362 ProteinModelPortal:Q0IIR9
GeneID:779887 KEGG:xtr:779887 Xenbase:XB-GENE-995720 Uniprot:Q0IIR9
Length = 492
Score = 449 (163.1 bits), Expect = 1.9e-41, P = 1.9e-41
Identities = 127/376 (33%), Positives = 200/376 (53%)
Query: 602 ADAGANLIRKSNSEVDKNEP----GESDLTAKVAHNDNSS---IAATQVM---GK---ED 648
A G NL N+ K +P + D KV N S ++ T+V G +D
Sbjct: 132 AGKGPNLPSSKNTNNVKMKPVRAREKKDTFLKVKDEKNKSSVDVSETEVKKFDGTGYDKD 191
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKR 708
L++A+ER + PN++W+D+ LE+ KK + + V LP+ + F R
Sbjct: 192 LIEALERDI--------ISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPW 243
Query: 709 SGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARP 768
GVL+ GPPGTGKTLLAKAVATEC F ++ L + Y GESEK VR +F+ AR P
Sbjct: 244 KGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAP 303
Query: 769 CVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD------LFIIGASNR 822
IF DE+DS+ RG S + RV +++L ++DG+ +S++ + ++ A+N
Sbjct: 304 TTIFIDEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNF 362
Query: 823 PDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFT 882
P ID AL R R +K +Y+ + S RE +L+ ++ +L +DV++ IA+ ++
Sbjct: 363 PWDIDEALRR--RLEKRIYIPLPS-AKGREELLRINLKELELADDVNIECIAENMD-GYS 418
Query: 883 GADMYALCADAWFHAAKRKV--LXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSM 940
GAD+ +C DA A +R++ L R D +E DF L+++S S+S
Sbjct: 419 GADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTTME--DFEMALKKVSKSVSA 476
Query: 941 AELKKYELLRDQFEGS 956
++++KYE ++F GS
Sbjct: 477 SDIEKYEKWIEEF-GS 491
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 448 (162.8 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 97/243 (39%), Positives = 148/243 (60%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E VGGL+ K + + ++LP+ H ++F S G+ + GVLLYGPPGTG
Sbjct: 166 SLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTG 225
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+
Sbjct: 226 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 285
Query: 781 PAR--GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDK 838
R G GDS + R + ++L ++DG +S+Q++ +I +NR D++D ALLRPGR D+
Sbjct: 286 SQRIEGEHGDSE--VQRTMMELLNQLDGF-ESTQNIKVIMCTNRIDILDEALLRPGRIDR 342
Query: 839 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAA 898
+ N +V R +LK +RK L+ + + IA N +GA++ A+C +A A
Sbjct: 343 KIEFP-NPNVEARMEILKIHSRKMNLMRGIDMLKIATDMN-NCSGAEVKAVCTEAGMFAL 400
Query: 899 KRK 901
+ +
Sbjct: 401 RER 403
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 448 (162.8 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 97/243 (39%), Positives = 148/243 (60%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E VGGL+ K + + ++LP+ H ++F S G+ + GVLLYGPPGTG
Sbjct: 166 SLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTG 225
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+
Sbjct: 226 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 285
Query: 781 PAR--GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDK 838
R G GDS + R + ++L ++DG +S+Q++ +I +NR D++D ALLRPGR D+
Sbjct: 286 SQRIEGEHGDSE--VQRTMMELLNQLDGF-ESTQNIKVIMCTNRIDILDEALLRPGRIDR 342
Query: 839 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAA 898
+ N +V R +LK +RK L+ + + IA N +GA++ A+C +A A
Sbjct: 343 KIEFP-NPNVEARMEILKIHSRKMNLMRGIDMLKIATDMN-NCSGAEVKAVCTEAGMFAL 400
Query: 899 KRK 901
+ +
Sbjct: 401 RER 403
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 447 (162.4 bits), Expect = 3.1e-41, P = 3.1e-41
Identities = 93/239 (38%), Positives = 150/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R +LK R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHILKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 447 (162.4 bits), Expect = 3.1e-41, P = 3.1e-41
Identities = 92/237 (38%), Positives = 149/237 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG +D + + + V+ PLLH + + + G+ GVLLYGPPGTGKTL A+AV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGD 788
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR G
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291
Query: 789 SG-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSD 847
G + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + + D
Sbjct: 292 GGDNEVQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFAL-PD 349
Query: 848 VSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
++ R +LK ++ + D+ +A+ CP N TGA++ ++C +A A A+RKV
Sbjct: 350 LAGRAHILKIHAKQMSVERDIRYDLLARLCP-NSTGAEIRSVCTEAGMFAIRARRKV 405
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 447 (162.4 bits), Expect = 3.1e-41, P = 3.1e-41
Identities = 92/237 (38%), Positives = 149/237 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG +D + + + V+ PLLH + + + G+ GVLLYGPPGTGKTL A+AV
Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAV 231
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGD 788
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR G
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291
Query: 789 SG-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSD 847
G + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + + D
Sbjct: 292 GGDNEVQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFAL-PD 349
Query: 848 VSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
++ R +LK ++ + D+ +A+ CP N TGA++ ++C +A A A+RKV
Sbjct: 350 LAGRAHILKIHAKQMSVERDIRYDLLARLCP-NSTGAEIRSVCTEAGMFAIRARRKV 405
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 432 (157.1 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 95/244 (38%), Positives = 150/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + K P + D+GGLE + I ++V+LPL H +L+ G++ GV+LYG PGTG
Sbjct: 169 SVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTG 228
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLAKAVA + S FL + G ELI Y+G+ + R IF+ A P ++F DE+D++
Sbjct: 229 KTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIG 288
Query: 781 PARGASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
R S +SGG + R + ++L ++DG +D D+ +I A+N+ + +DPAL+RPGR D
Sbjct: 289 TKRYDS-NSGGEREIQRTMLELLNQLDGFDDRG-DVKVIMATNKIETLDPALIRPGRIDR 346
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+L+ N D+S ++++L T K L EDV+L ++ + +GAD+ A+C +A A
Sbjct: 347 KILFE--NPDLSTKKKILGIHTSKMNLSEDVNLETLVTT-KDDLSGADIQAMCTEAGLLA 403
Query: 898 AKRK 901
+ +
Sbjct: 404 LRER 407
Score = 41 (19.5 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 137 TRKQVCDGDVHSKHSSPTMLTFPSIHLPQDDMELLD 172
T +++ D D H+ +SPTM + L D ELL+
Sbjct: 108 TLEEIIDDD-HAIVTSPTMPDYYVSILSFVDKELLE 142
>UNIPROTKB|E1BHF2 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:DAAA02033094
IPI:IPI00710392 RefSeq:NP_001179847.1 UniGene:Bt.104141
ProteinModelPortal:E1BHF2 PRIDE:E1BHF2 Ensembl:ENSBTAT00000012297
GeneID:537739 KEGG:bta:537739 NextBio:20877204 Uniprot:E1BHF2
Length = 490
Score = 446 (162.1 bits), Expect = 4.0e-41, P = 4.0e-41
Identities = 118/318 (37%), Positives = 175/318 (55%)
Query: 647 EDLVKAMERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGL 705
+DLV+A+ER RN P+V W+D+ LE+ KK + + V LP+ D F
Sbjct: 188 KDLVEALERDIVSRN---------PSVHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR 238
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
R GVL+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 239 RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARF 298
Query: 766 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGA 819
P IF DE+DS+ RG S D RV S++L ++DG+ +D S+ + ++ A
Sbjct: 299 YAPTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAA 357
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
+N P ID AL R R +K +Y+ + + R +LK R+ +L D+ L IA+K
Sbjct: 358 TNFPWDIDEALRR--RLEKRIYIPLPT-AKGRTELLKINLREVELDPDIQLEDIAEKIE- 413
Query: 880 NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLS 939
++GAD+ +C DA A +R++ + + V DF L++++ S+S
Sbjct: 414 GYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTRGDFELALKKIAKSVS 473
Query: 940 MAELKKYELLRDQFEGSS 957
A+L+KYE +F GS+
Sbjct: 474 AADLEKYEKWMVEF-GSA 490
>UNIPROTKB|F1MAX6 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
GeneTree:ENSGT00550000074466 EMBL:DAAA02033094 IPI:IPI00824872
Ensembl:ENSBTAT00000052665 Uniprot:F1MAX6
Length = 499
Score = 446 (162.1 bits), Expect = 4.0e-41, P = 4.0e-41
Identities = 118/318 (37%), Positives = 175/318 (55%)
Query: 647 EDLVKAMERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGL 705
+DLV+A+ER RN P+V W+D+ LE+ KK + + V LP+ D F
Sbjct: 197 KDLVEALERDIVSRN---------PSVHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR 247
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
R GVL+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 248 RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARF 307
Query: 766 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGA 819
P IF DE+DS+ RG S D RV S++L ++DG+ +D S+ + ++ A
Sbjct: 308 YAPTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAA 366
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
+N P ID AL R R +K +Y+ + + R +LK R+ +L D+ L IA+K
Sbjct: 367 TNFPWDIDEALRR--RLEKRIYIPLPT-AKGRTELLKINLREVELDPDIQLEDIAEKIE- 422
Query: 880 NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLS 939
++GAD+ +C DA A +R++ + + V DF L++++ S+S
Sbjct: 423 GYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTRGDFELALKKIAKSVS 482
Query: 940 MAELKKYELLRDQFEGSS 957
A+L+KYE +F GS+
Sbjct: 483 AADLEKYEKWMVEF-GSA 499
>UNIPROTKB|E2QSK3 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
Ensembl:ENSCAFT00000010676 Uniprot:E2QSK3
Length = 492
Score = 446 (162.1 bits), Expect = 4.0e-41, P = 4.0e-41
Identities = 130/376 (34%), Positives = 199/376 (52%)
Query: 600 LVADAGANLI--RKSNSEVDK-----NEPGESDLTAKVAHNDNSS---IAATQVMGKE-D 648
+V+ G N I K + E+DK ++ E+ + + +D +S I G + D
Sbjct: 132 VVSIRGHNTIAEEKVHDELDKASQSRSKTSENKMRGRKNMHDGASDGEIPKFDGAGYDKD 191
Query: 649 LVKAMERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRK 707
LV+A+ER RN P++ W+D+ LE+ KK + + V LP+ D F R
Sbjct: 192 LVEALERDIVSRN---------PSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRP 242
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVL+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 243 WKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYA 302
Query: 768 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASN 821
P IF DE+DS+ RG S D RV S++L ++DG+ +D S+ + ++ A+N
Sbjct: 303 PTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATN 361
Query: 822 RPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNF 881
P ID AL R R +K +Y+ + + R +LK R+ +L D+ L IA+K +
Sbjct: 362 FPWDIDEALRR--RLEKRIYIPLPT-AKGRTELLKINLREVELDPDIQLEDIAEKIE-GY 417
Query: 882 TGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMA 941
+GAD+ +C DA A +R++ + + V DF L++++ S+S A
Sbjct: 418 SGADITNVCRDASLMAMRRRINGLGPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAA 477
Query: 942 ELKKYELLRDQFEGSS 957
+L+KYE +F GS+
Sbjct: 478 DLEKYEKWMVEF-GSA 492
>UNIPROTKB|F6V168 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 Ensembl:ENSCAFT00000010676
EMBL:AAEX03014230 RefSeq:XP_543146.2 ProteinModelPortal:F6V168
GeneID:486020 KEGG:cfa:486020 Uniprot:F6V168
Length = 490
Score = 446 (162.1 bits), Expect = 4.0e-41, P = 4.0e-41
Identities = 124/356 (34%), Positives = 187/356 (52%)
Query: 612 SNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGK---EDLVKAMERS-KKRNASALGAP 667
++ + D G D K H+ S + G +DLV+A+ER RN
Sbjct: 150 TSRDKDYRARGRDDKGRKNMHDGASDGEIPKFDGAGYDKDLVEALERDIVSRN------- 202
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKA 727
P++ W+D+ LE+ KK + + V LP+ D F R GVL+ GPPGTGKT+LAKA
Sbjct: 203 --PSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKA 260
Query: 728 VATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASG 787
VATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S
Sbjct: 261 VATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS- 319
Query: 788 DSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
D RV S++L ++DG+ +D S+ + ++ A+N P ID AL R R +K +Y
Sbjct: 320 DEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIY 377
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ + + R +LK R+ +L D+ L IA+K ++GAD+ +C DA A +R+
Sbjct: 378 IPLPT-AKGRTELLKINLREVELDPDIQLEDIAEKIE-GYSGADITNVCRDASLMAMRRR 435
Query: 902 VLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 957
+ + + V DF L++++ S+S A+L+KYE +F GS+
Sbjct: 436 INGLGPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYEKWMVEF-GSA 490
>UNIPROTKB|Q9PUL2 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8355 "Xenopus laevis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0030496 "midbody" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AF177942
UniGene:Xl.6322 ProteinModelPortal:Q9PUL2 IntAct:Q9PUL2
Xenbase:XB-GENE-995725 Uniprot:Q9PUL2
Length = 486
Score = 446 (162.1 bits), Expect = 4.0e-41, P = 4.0e-41
Identities = 120/362 (33%), Positives = 194/362 (53%)
Query: 602 ADAGANLIRKSNSEVDKNEP--GESDLTAKVAHNDNSSIAATQVM---GK---EDLVKAM 653
A G NL N+ K +P A + + ++ ++ T+V G +DL++A+
Sbjct: 133 AAKGPNLPSARNANNVKMKPVRAREKKDALIKNKSSADVSETEVKRFDGSGYDKDLIEAL 192
Query: 654 ERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLL 713
ER + PN++W+D+ LE+ KK + + V LP+ + F R GVL+
Sbjct: 193 ERDI--------ISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLM 244
Query: 714 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 773
GPPGTGKTLLAKAVATEC F ++ L + Y GESEK VR +F+ AR P IF
Sbjct: 245 VGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFI 304
Query: 774 DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQD------LFIIGASNRPDLID 827
DE+DS+ RG S + RV +++L ++DG+ +S++ + ++ A+N P ID
Sbjct: 305 DEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDID 363
Query: 828 PALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMY 887
AL R R +K +Y+ + S RE +L+ ++ +L +DV++ IA+ ++GAD+
Sbjct: 364 EALRR--RLEKRIYIPLPS-AKGREELLRINLKELELADDVNIECIAENMD-GYSGADIT 419
Query: 888 ALCADAWFHAAKRKV--LXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKK 945
+C DA A +R++ L R D +E DF L+++S S+S ++++K
Sbjct: 420 NVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTTME--DFEMALKKVSKSVSASDIEK 477
Query: 946 YE 947
YE
Sbjct: 478 YE 479
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 446 (162.1 bits), Expect = 4.0e-41, P = 4.0e-41
Identities = 98/256 (38%), Positives = 153/256 (59%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
L+K + S + K+P+ +E VGGLE K I + ++LP+ H +LF S G+ +
Sbjct: 119 LIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQ 178
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
G+LLYGPPGTGKTLLA+AVA F+ V G EL+ YIGE + VR++F AR
Sbjct: 179 PKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 238
Query: 768 PCVIFFDELDSLAPARG-ASGDSG-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDL 825
P +IF DE+DS+ +R +SG SG + R + ++L ++DG ++++++ +I A+NR D+
Sbjct: 239 PSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDI 297
Query: 826 IDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGAD 885
+DPALLRPGR D+ + S R +L+ +R L + L SIA+K +GA+
Sbjct: 298 LDPALLRPGRIDRKIEFPPPS-AEARAEILRIHSRSMNLTRGIDLKSIAEKMN-GASGAE 355
Query: 886 MYALCADAWFHAAKRK 901
+ +C +A A + +
Sbjct: 356 LKGVCTEAGMFALRER 371
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 415 (151.1 bits), Expect = 4.4e-41, Sum P(3) = 4.4e-41
Identities = 87/231 (37%), Positives = 141/231 (61%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
NV + VGGL D + + ++++LPL++ +LF G++ GVLLYGPPGTGKTLLA+A+A
Sbjct: 136 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 195
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
+ NFL + +I+ YIGES + +R++F AR +PC+IF DE+D++ R + G S
Sbjct: 196 SNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 255
Query: 790 GG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
+ R + ++L ++DG ++ + I+ A+NRPD++DPALLRPGR D+ + + + ++
Sbjct: 256 ADREIQRTLMELLNQLDGFDELGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 314
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
+ R VLK ++ Y K F GAD+ +C +A A +
Sbjct: 315 A-RMEVLKIHAAGIAKHGEID-YEAVVKLAEGFNGADLRNVCTEAGMAAIR 363
Score = 40 (19.1 bits), Expect = 4.4e-41, Sum P(3) = 4.4e-41
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 916 QADSVVVEYDDFVKVLRELSPSLSMAELKKY 946
+A+ V ++DF+K +R+L+ + + Y
Sbjct: 363 RAERDYVVHEDFMKAVRKLNDAKKLESSAHY 393
Score = 38 (18.4 bits), Expect = 4.4e-41, Sum P(3) = 4.4e-41
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAMERS 656
P E D + + H D +++ + V G D ++ + S
Sbjct: 119 PREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRES 155
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 448 (162.8 bits), Expect = 4.9e-41, P = 4.9e-41
Identities = 105/252 (41%), Positives = 152/252 (60%)
Query: 651 KAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSG 710
KAM K R A L + V +EDV G+++ K+ + + +Q K G R G
Sbjct: 131 KAMAFGKSR-AKLLTEAQ-GRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKG 188
Query: 711 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCV 770
VLL GPPGTGKTLLA+AVA E + F S+ G + + M++G VRD+F + + PC+
Sbjct: 189 VLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCI 248
Query: 771 IFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDP 828
IF DE+D++ RGA G GG +R ++Q+L E+DG +S++ + +I A+NRPD++DP
Sbjct: 249 IFIDEIDAVGRHRGA-GLGGGHDEREQTLNQLLVEMDGF-ESNEGVILIAATNRPDVLDP 306
Query: 829 ALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYA 888
ALLRPGRFD+ + V DV RE +LK T+K L DV L IA+ P F+GAD+
Sbjct: 307 ALLRPGRFDRQVVVP-QPDVKGREMILKVHTKKTPLASDVDLGVIARGTP-GFSGADLSN 364
Query: 889 LCADAWFHAAKR 900
+ +A AA++
Sbjct: 365 VVNEAALLAARK 376
>UNIPROTKB|Q9BW62 [details] [associations]
symbol:KATNAL1 "Katanin p60 ATPase-containing subunit
A-like 1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:CH471075
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024 EMBL:AK291439
EMBL:AL356750 EMBL:BC000612 IPI:IPI00789455 RefSeq:NP_001014402.1
RefSeq:NP_115492.1 UniGene:Hs.243596 ProteinModelPortal:Q9BW62
SMR:Q9BW62 IntAct:Q9BW62 MINT:MINT-1463957 STRING:Q9BW62
PhosphoSite:Q9BW62 DMDM:60390214 PaxDb:Q9BW62 PRIDE:Q9BW62
DNASU:84056 Ensembl:ENST00000380615 Ensembl:ENST00000380617
GeneID:84056 KEGG:hsa:84056 UCSC:uc001uss.3 GeneCards:GC13M030776
HGNC:HGNC:28361 HPA:HPA046205 MIM:614764 neXtProt:NX_Q9BW62
PharmGKB:PA134951885 HOGENOM:HOG000225142 InParanoid:Q9BW62
OMA:GVMQQIQ GenomeRNAi:84056 NextBio:73193 ArrayExpress:Q9BW62
Bgee:Q9BW62 CleanEx:HS_KATNAL1 Genevestigator:Q9BW62
GermOnline:ENSG00000102781 Uniprot:Q9BW62
Length = 490
Score = 445 (161.7 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 117/318 (36%), Positives = 175/318 (55%)
Query: 647 EDLVKAMERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGL 705
+DLV+A+ER RN P++ W+D+ LE+ KK + + V LP+ D F
Sbjct: 188 KDLVEALERDIVSRN---------PSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR 238
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
R GVL+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 239 RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARF 298
Query: 766 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGA 819
P IF DE+DS+ RG S D RV S++L ++DG+ +D S+ + ++ A
Sbjct: 299 YAPTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAA 357
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
+N P ID AL R R +K +Y+ + + R +LK R+ +L D+ L IA+K
Sbjct: 358 TNFPWDIDEALRR--RLEKRIYIPLPT-AKGRAELLKINLREVELDPDIQLEDIAEKIE- 413
Query: 880 NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLS 939
++GAD+ +C DA A +R++ + + V DF L++++ S+S
Sbjct: 414 GYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVS 473
Query: 940 MAELKKYELLRDQFEGSS 957
A+L+KYE +F GS+
Sbjct: 474 AADLEKYEKWMVEF-GSA 490
>UNIPROTKB|F1RST8 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 KO:K07767 OMA:GVMQQIQ
GeneTree:ENSGT00550000074466 EMBL:CU210871 RefSeq:XP_001928701.1
UniGene:Ssc.44020 ProteinModelPortal:F1RST8
Ensembl:ENSSSCT00000010220 GeneID:100156612 KEGG:ssc:100156612
Uniprot:F1RST8
Length = 490
Score = 445 (161.7 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 117/318 (36%), Positives = 175/318 (55%)
Query: 647 EDLVKAMERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGL 705
+DLV+A+ER RN P++ W+D+ LE+ KK + + V LP+ D F
Sbjct: 188 KDLVEALERDIVSRN---------PSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR 238
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
R GVL+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 239 RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARF 298
Query: 766 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGA 819
P IF DE+DS+ RG S D RV S++L ++DG+ +D S+ + ++ A
Sbjct: 299 YAPTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAA 357
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
+N P ID AL R R +K +Y+ + + R +LK R+ +L D+ L IA+K
Sbjct: 358 TNFPWDIDEALRR--RLEKRIYIPLPT-AKGRTELLKINLREVELDPDIQLEDIAEKIE- 413
Query: 880 NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLS 939
++GAD+ +C DA A +R++ + + V DF L++++ S+S
Sbjct: 414 GYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVS 473
Query: 940 MAELKKYELLRDQFEGSS 957
A+L+KYE +F GS+
Sbjct: 474 AADLEKYEKWMVEF-GSA 490
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 445 (161.7 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 109/293 (37%), Positives = 174/293 (59%)
Query: 618 KNEPGESDLTAKVAHNDNSSIAA-TQVMGKED--LVKAMERSKKRN-ASALGAPKVPNVK 673
KN P + A D S++AA T+V + D + + SK S + KVP+
Sbjct: 114 KNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDST 173
Query: 674 WEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA--T 730
+E VGGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+AVA T
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
EC+ F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+ +R G G
Sbjct: 234 ECT--FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-VEGSRG 290
Query: 791 G--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
G + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D+ + D
Sbjct: 291 GDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPA-PDE 348
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
R ++LK +RK L+ + + IA++ P +GA++ ++C +A A + +
Sbjct: 349 KARAQILKIHSRKMNLMRGIRMDKIAEQIP-GASGAEVKSVCTEAGMFALRER 400
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 471 (170.9 bits), Expect = 5.5e-41, P = 5.5e-41
Identities = 113/344 (32%), Positives = 196/344 (56%)
Query: 605 GANLIRKSNSEVDKNEP--GESDLTAKVAHNDNSSIAATQVM--GKEDLVKAMERSKKRN 660
G N +SE D+ P G + ++ K + ++ +++ G +D ++S +
Sbjct: 329 GQNFSDSDSSE-DEIAPINGVATISKKQPKDKKPNVGGPKLITGGSDDTSGKKKKSTLSD 387
Query: 661 ASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGT 719
LG N+ + VGGL++ + + V LPLL+ +L+ + + GVL +GPPGT
Sbjct: 388 TDPLGVDM--NIDFSVVGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGT 445
Query: 720 GKTLLAKAVATECS-----LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFD 774
GKTL+A+A+A CS + F KG + ++ ++GE+E+ +R +F++A++ +P +IFFD
Sbjct: 446 GKTLMARALAASCSTSERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPSIIFFD 505
Query: 775 ELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPG 834
E+D LAP R + + + +VS +LA +DG+++ Q + +IGA+NRPD IDPAL RPG
Sbjct: 506 EIDGLAPVRSSKQEQ--IHASIVSTLLALMDGMDNRGQ-VIVIGATNRPDAIDPALRRPG 562
Query: 835 RFDKLLYVGVNSDVSYRERVLKALTRKFKL-LEDVSLYSIAKKCPPNFTGADMYALCADA 893
RFD+ Y + D+ R+ +LK TRK+ L D+ L +A+ + GAD+ ALC +A
Sbjct: 563 RFDREFYFPL-PDLGSRKEILKIHTRKWNPELPDLFLERLAQ-LTKGYGGADLRALCTEA 620
Query: 894 WFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPS 937
++ +RK +++ + V+ DF+K + ++ PS
Sbjct: 621 ALNSIQRKYPQIYGTNEKLKVNPSKVKVIA-KDFMKAIEKIVPS 663
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 444 (161.4 bits), Expect = 6.6e-41, P = 6.6e-41
Identities = 93/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RKV
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKV 403
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 444 (161.4 bits), Expect = 6.6e-41, P = 6.6e-41
Identities = 132/418 (31%), Positives = 213/418 (50%)
Query: 501 EDEDEESHGYFPVKEIEKICRQQVLLVAAADSSEGLPPTI--RRCFSHEISMGP-----L 553
+D+ ++ Y P + R++ + D+S LP I RC + M L
Sbjct: 22 KDQKKDKPKYEPPVPT-RTGRRKKKAQSGPDASAKLPTVIPTTRCRLRLLKMQRIHDHLL 80
Query: 554 TEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADAGANL 608
E++ V+ + L+P E T + + V +I G + G + D HA+V+ AG
Sbjct: 81 MEEEYVQN-QERLKPQDERTQEERNR--VDEIRGTPMSVGTLEEIIDDDHAIVSTAGPEY 137
Query: 609 IRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGA 666
S VDK+ EPG S L H+ SI + + ++ M+ K
Sbjct: 138 YVSIMSFVDKDMLEPGCSVLL----HHKAMSIVGLLLDDTDPMINVMKLDK--------- 184
Query: 667 PKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLA 725
P + D+GGLE + I + V+LPL H +L+ G++ GV+LYG PGTGKTLLA
Sbjct: 185 --APTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLA 242
Query: 726 KAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR-G 784
KAVA + S FL V G ELI Y+G+ + VR +F A P ++F DE+D++ R
Sbjct: 243 KAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYD 302
Query: 785 ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVG 843
A + + R + ++L ++DG + S +D+ +I A+NR +DPAL+RPGR D K+L+
Sbjct: 303 AQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFE- 361
Query: 844 VNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
N D + + ++ T K L EDV+L + + C + +GA++ A+ ++A A + +
Sbjct: 362 -NPDEATKRKIFTIHTSKMNLGEDVNLEELIQ-CKDDLSGAEIKAIVSEAGLLALRER 417
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 444 (161.4 bits), Expect = 6.6e-41, P = 6.6e-41
Identities = 97/245 (39%), Positives = 156/245 (63%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E VGGL+ K I + ++LP+ H +LF + G+ + GVLL+GPPGTG
Sbjct: 146 SLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTG 205
Query: 721 KTLLAKAVA--TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDS 778
KTLLA+AVA TEC+ F+ V G EL+ +IGE + VR++F AR P +IF DE+DS
Sbjct: 206 KTLLARAVAHHTECT--FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 263
Query: 779 LAPARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRF 836
+ +R G SGG + R + ++L ++DG ++++++ +I A+NR D++DPALLRPGR
Sbjct: 264 IGSSR-VEGSSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDPALLRPGRI 321
Query: 837 DKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFH 896
D+ + D R +LK +RK L+ +++ IA++ P +GA++ ++C +A
Sbjct: 322 DRKIEFPA-PDEKARADILKIHSRKMNLMRGINMAKIAEQIP-GASGAEVKSVCTEAGMF 379
Query: 897 AAKRK 901
A + +
Sbjct: 380 ALRER 384
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 161 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 220
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 221 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 280
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 281 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 336
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 337 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 394
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 169 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 228
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 289 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 344
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 345 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 402
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 33 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 92
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 93 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 152
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 153 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 208
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 209 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 266
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 171 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 290
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 291 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 346
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 347 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 404
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 443 (161.0 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 92/239 (38%), Positives = 149/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+ PLLH + F + G+ GVLL+GPPGTGKTL A+AV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRPD +DPAL+RPGR D+ + +
Sbjct: 290 GGDNE--VQRTMLELINQLDGF-DPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL- 345
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + K R + D+ +A+ CP N TGA++ ++C +A A A+RK+
Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLARLCP-NSTGAEIRSVCTEAGMFAIRARRKI 403
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 432 (157.1 bits), Expect = 9.0e-41, Sum P(2) = 9.0e-41
Identities = 98/255 (38%), Positives = 151/255 (59%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
L K + S S + KVP+ ++ +GGL+ K I + ++L L H +LF S G+ +
Sbjct: 106 LEKMLPSSVDPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQ 165
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVLLYGPPGTGKTLLA+AVA F+ V G EL+ YIGE + VR++F AR
Sbjct: 166 PKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 225
Query: 768 PCVIFFDELDSLAPARGASGDSG-GVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
P +IF DE+DS+ +R S SG + R + ++L ++DG + ++++ II A+NR D++
Sbjct: 226 PSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGF-EPTKNIKIIMATNRLDIL 284
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
DPALLRPGR D+ + S V R +L+ +R L ++L IA+K +GA++
Sbjct: 285 DPALLRPGRIDRKIEFPPPS-VEARADILRIHSRSMNLTRGINLTKIAEKMN-GCSGAEL 342
Query: 887 YALCADAWFHAAKRK 901
+C +A +A + +
Sbjct: 343 KGVCTEAGMYALRER 357
Score = 37 (18.1 bits), Expect = 9.0e-41, Sum P(2) = 9.0e-41
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 190 ISSLKFLVHQGKEVLESLFIAKVDDGTSGQ--DGKASLIKLGLQSVGQLPKYASHLRVSF 247
I S+K + QG+ VL L + D + + + L++ VG++ K S +V
Sbjct: 11 IESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKVMSTKKV-L 69
Query: 248 VKI-PE 252
VK+ PE
Sbjct: 70 VKVHPE 75
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 142 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 201
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 202 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 261
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 262 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 319
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 320 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 376
Query: 898 AKRK 901
+ +
Sbjct: 377 LRER 380
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 104 DVDKNIDINDVTPNCRVALRND 125
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 256 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 313
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 314 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 370
Query: 898 AKRK 901
+ +
Sbjct: 371 LRER 374
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 256 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 313
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 314 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 370
Query: 898 AKRK 901
+ +
Sbjct: 371 LRER 374
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 256 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 313
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 314 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 370
Query: 898 AKRK 901
+ +
Sbjct: 371 LRER 374
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 256 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 313
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 314 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 370
Query: 898 AKRK 901
+ +
Sbjct: 371 LRER 374
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 144 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 203
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 204 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 263
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 264 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 321
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 322 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 378
Query: 898 AKRK 901
+ +
Sbjct: 379 LRER 382
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 106 DVDKNIDINDVTPNCRVALRND 127
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 256 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 313
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 314 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 370
Query: 898 AKRK 901
+ +
Sbjct: 371 LRER 374
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 256 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 313
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 314 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 370
Query: 898 AKRK 901
+ +
Sbjct: 371 LRER 374
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 431 (156.8 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 196 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 256 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 313
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 314 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 370
Query: 898 AKRK 901
+ +
Sbjct: 371 LRER 374
Score = 38 (18.4 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 98 DVDKNIDINDVTPNCRVALRND 119
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 442 (160.7 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 95/237 (40%), Positives = 145/237 (61%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
KVP+ ++ +GGL+ K I + ++LP+ H +LF S G+ + GVLLYGPPGTGKTLLA+
Sbjct: 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 213
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+ AR S
Sbjct: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
Query: 787 GDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 844
G G + R + ++L ++DG ++S + ++ A+NR D++D ALLRPGR D+ +
Sbjct: 274 GSGNGDSEVQRTMLELLNQLDGF-EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP- 331
Query: 845 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
N + R +LK +RK L+ + L IA+K +GA++ A+C +A A + +
Sbjct: 332 NPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMN-GASGAELKAVCTEAGMFALRER 387
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 442 (160.7 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 95/237 (40%), Positives = 145/237 (61%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
KVP+ ++ +GGL+ K I + ++LP+ H +LF S G+ + GVLLYGPPGTGKTLLA+
Sbjct: 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 213
Query: 727 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGAS 786
AVA F+ V G EL+ YIGE + VR++F AR P +IF DE+DS+ AR S
Sbjct: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
Query: 787 GDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 844
G G + R + ++L ++DG ++S + ++ A+NR D++D ALLRPGR D+ +
Sbjct: 274 GSGNGDSEVQRTMLELLNQLDGF-EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP- 331
Query: 845 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
N + R +LK +RK L+ + L IA+K +GA++ A+C +A A + +
Sbjct: 332 NPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMN-GASGAELKAVCTEAGMFALRER 387
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 431 (156.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 95/244 (38%), Positives = 151/244 (61%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H +LF + G+ + GVLLYGPPGTG
Sbjct: 144 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 203
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 204 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 263
Query: 781 PARGASGDSGG--VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD- 837
+R G SGG + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D
Sbjct: 264 SSR-LEGGSGGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDR 321
Query: 838 KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA 897
K+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 322 KIEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYA 378
Query: 898 AKRK 901
+ +
Sbjct: 379 LRER 382
Score = 37 (18.1 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
D+ +N+ N+ PN +V L ++
Sbjct: 106 DIDKNIDINDVTPNCRVALRND 127
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 427 (155.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 87/231 (37%), Positives = 143/231 (61%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
N+ + DVGGL + + + + V+LPL++ +LF G+ G LL+GPPGTGKTLLA+AVA
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
++ NFL V +++ YIGES + +R++F AR +PC++F DE+D++ R + G S
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265
Query: 790 GG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
+ R + ++L ++DG DS + +I A+NRPD +DPALLRPGR D+ + +G+ ++
Sbjct: 266 ADREIQRTLMELLNQLDGF-DSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQ 324
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
S R +LK + K ++ ++ K F+ AD+ +C +A A +
Sbjct: 325 S-RLEILKIHSNKITKHGEIDFEAVVK-LSDGFSAADLRNVCTEAGMFAIR 373
Score = 41 (19.5 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAM 653
P E D L K++H D +I+ + V G + ++ +
Sbjct: 129 PREVDPLVYKMSHEDPGNISYSDVGGLAEQIREL 162
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 427 (155.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 87/231 (37%), Positives = 143/231 (61%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
N+ + DVGGL + + + + V+LPL++ +LF G+ G LL+GPPGTGKTLLA+AVA
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
++ NFL V +++ YIGES + +R++F AR +PC++F DE+D++ R + G S
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265
Query: 790 GG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
+ R + ++L ++DG DS + +I A+NRPD +DPALLRPGR D+ + +G+ ++
Sbjct: 266 ADREIQRTLMELLNQLDGF-DSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQ 324
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
S R +LK + K ++ ++ K F+ AD+ +C +A A +
Sbjct: 325 S-RLEILKIHSNKITKHGEIDFEAVVK-LSDGFSAADLRNVCTEAGMFAIR 373
Score = 41 (19.5 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 621 PGESD-LTAKVAHNDNSSIAATQVMGKEDLVKAM 653
P E D L K++H D +I+ + V G + ++ +
Sbjct: 129 PREVDPLVYKMSHEDPGNISYSDVGGLAEQIREL 162
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 446 (162.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 104/268 (38%), Positives = 161/268 (60%)
Query: 641 TQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDL 700
TQ G + + RSK A K P + + +V G+++ K+ + + V+ L ++
Sbjct: 129 TQARGANNQAVSFGRSK---AKLFNMDK-PTITFANVAGVDEAKQEVGEVVEF-LKSREK 183
Query: 701 FSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDI 759
F + G R G+LL GPPGTGKTLLAKA+A E + F S+ G E + M++G VRD+
Sbjct: 184 FQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDL 243
Query: 760 FQKARSARPCVIFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFII 817
F +A+ PC+IF DE+D++ RGA G GG +R ++Q+L E+DG D+ + +I
Sbjct: 244 FDQAKKNAPCIIFIDEIDAVGRQRGA-GLGGGHDEREQTLNQILVEMDGF-DTDTSVIVI 301
Query: 818 GASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKC 877
A+NRPD++DPALLRPGRFD+ + + D++ RE +LK + L + V+L ++AK+
Sbjct: 302 AATNRPDILDPALLRPGRFDRRVVLD-KPDITGREAILKIHAKGKPLADTVNLENLAKQT 360
Query: 878 PPNFTGADMYALCADAWFHAAK--RKVL 903
F+GAD+ L +A AA+ RKV+
Sbjct: 361 V-GFSGADLANLLNEAAILAARKNRKVV 387
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 441 (160.3 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 113/313 (36%), Positives = 172/313 (54%)
Query: 596 DLHALVADA-GANLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKA 652
D HA+V+ A G S VDK+ EPG S L H+ S+ + LV
Sbjct: 137 DDHAIVSSATGPEYYVSIMSFVDKDLLEPGASILL----HHKTVSVVGVLTEESDPLVSV 192
Query: 653 MERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGV 711
M+ K P + D+GGLE + + ++V+LPLLH +L+ G++ GV
Sbjct: 193 MKLDK-----------APTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGV 241
Query: 712 LLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVI 771
+LYG PGTGKTLLAKAVA + S FL + G ELI Y+G+ + VR IFQ A P ++
Sbjct: 242 ILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIV 301
Query: 772 FFDELDSLAPARGASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPA 829
F DE+D++ R S SGG + R + ++L ++DG +D D+ +I A+N+ + +DPA
Sbjct: 302 FIDEIDAIGTKRYDS-TSGGEREIQRTMLELLNQLDGFDDRG-DVKVIMATNKIETLDPA 359
Query: 830 LLRPGRFD-KLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYA 888
L+RPGR D K+L+ N D + ++++ T K L +DV L + + +GAD+ A
Sbjct: 360 LIRPGRIDRKILFE--NPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQ-KDDLSGADIRA 416
Query: 889 LCADAWFHAAKRK 901
+C +A A + +
Sbjct: 417 ICTEAGLMALRER 429
>UNIPROTKB|B5X3X5 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8030 "Salmo salar" [GO:0000922 "spindle pole" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:BT045744
RefSeq:NP_001133845.1 UniGene:Ssa.26227 ProteinModelPortal:B5X3X5
GeneID:100195344 CTD:100195344 Uniprot:B5X3X5
Length = 486
Score = 441 (160.3 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 114/317 (35%), Positives = 177/317 (55%)
Query: 647 EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLR 706
+DL++A+ER + PNVKW+D+ LE+ KK + + V LP+ + F R
Sbjct: 184 KDLIEALERDI--------ISQNPNVKWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRR 235
Query: 707 KRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSA 766
GVL+ GPPGTGKTLLAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 236 PWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRILFEMARFY 295
Query: 767 RPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN------DSSQDLFIIGAS 820
P IF DE+DS+ RG S + RV +++L ++DG+ D S+ + ++ A+
Sbjct: 296 APTTIFIDEIDSMCSRRGTS-EEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAAT 354
Query: 821 NRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPN 880
N P ID AL R R +K +Y+ + S R +L+ ++ +L DV + IA++
Sbjct: 355 NFPWDIDEALRR--RLEKRIYIPLPS-AKGRVELLRINLKELELANDVDMAKIAEQSE-G 410
Query: 881 FTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADS-VVVEYDDFVKVLRELSPSLS 939
++GAD+ +C DA A +R++ I +A+ + +DF L+++S S+S
Sbjct: 411 YSGADITNVCRDASLMAMRRRI-EGLTPEEIRNISRAEMHMPTTMEDFESSLKKVSKSVS 469
Query: 940 MAELKKYELLRDQFEGS 956
++L+KYE ++F GS
Sbjct: 470 ASDLEKYEKWIEEF-GS 485
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 441 (160.3 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 104/286 (36%), Positives = 164/286 (57%)
Query: 617 DKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWED 676
D +PG DL + D+ I T + VKAME +K P + D
Sbjct: 128 DSLKPG--DLVG--VNKDSYLILDTLPSEYDSRVKAMEVDEK-----------PTEDYND 172
Query: 677 VGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 735
+GGLE + +++ + LP+ HK+ F G+R GVLLYGPPGTGKTL+A+A A + +
Sbjct: 173 IGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNAT 232
Query: 736 FLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMD 794
FL + GP+L+ M+IG+ K VRD FQ A+ PC+IF DE+D++ R S SG +
Sbjct: 233 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQ 292
Query: 795 RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERV 854
R + ++L ++DG + S + + +I A+NR D++DPAL+R GR D+ + ++ + R R+
Sbjct: 293 RTMLELLNQLDGFS-SDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA-RARI 350
Query: 855 LKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
L+ +RK + DV+ +A+ +F GA + A+C +A A +R
Sbjct: 351 LQIHSRKMNVHPDVNFEELARSTD-DFNGAQLKAVCVEAGMLALRR 395
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 440 (159.9 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 94/253 (37%), Positives = 148/253 (58%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
LV + + S L + P+V + D+GG++ K+ I + V+LPL H +L+ G+
Sbjct: 134 LVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDP 193
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVL+YGPPG GKT+LAKAVA + +F+ V G E + Y+GE + VRD+F+ A+
Sbjct: 194 PRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 253
Query: 768 PCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
P +IF DE+D++A R A + + R++ ++L ++DG D + ++ +I A+NR D +
Sbjct: 254 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQTTNVKVIMATNRADTL 312
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
DPALLRPGR D+ + + D + V +T K L EDV L + P +GAD+
Sbjct: 313 DPALLRPGRLDRKIEFPL-PDRRQKRLVFSTITSKMNLSEDVDLEEFVAR-PDKISGADI 370
Query: 887 YALCADAWFHAAK 899
A+C +A HA +
Sbjct: 371 NAICQEAGMHAVR 383
>MGI|MGI:2387638 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2387638 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:BC030434 IPI:IPI00114980
RefSeq:NP_705800.1 UniGene:Mm.397405 ProteinModelPortal:Q8K0T4
SMR:Q8K0T4 PhosphoSite:Q8K0T4 PaxDb:Q8K0T4 PRIDE:Q8K0T4
Ensembl:ENSMUST00000047257 GeneID:231912 KEGG:mmu:231912
UCSC:uc009aow.2 GeneTree:ENSGT00550000074466 InParanoid:Q8K0T4
NextBio:380863 Bgee:Q8K0T4 CleanEx:MM_KATNAL1 Genevestigator:Q8K0T4
GermOnline:ENSMUSG00000041298 Uniprot:Q8K0T4
Length = 488
Score = 440 (159.9 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 124/358 (34%), Positives = 186/358 (51%)
Query: 610 RKSNSEVDKNEPGESDLTAKVAHN--DNSSIAATQVMGKE-DLVKAMERS-KKRNASALG 665
+ ++ + D G D K + +S I G + DLV+A+ER RN
Sbjct: 146 KPASRDKDYRARGRDDKARKNVQDGASDSEIPKFDGAGYDKDLVEALERDIVSRN----- 200
Query: 666 APKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLA 725
P++ W+D+ LE+ KK + + V LP+ D F R GVL+ GPPGTGKT+LA
Sbjct: 201 ----PSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLA 256
Query: 726 KAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGA 785
KAVATEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG
Sbjct: 257 KAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGT 316
Query: 786 SGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 839
S D RV S++L ++DG+ +D S+ + ++ A+N P ID AL R R +K
Sbjct: 317 S-DEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 373
Query: 840 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
+Y+ + + R +LK R+ +L DV L IA K ++GAD+ +C DA A +
Sbjct: 374 IYIPLPT-AKGRAELLKISLREVELDPDVHLEDIADKTE-GYSGADITNICRDASLMAMR 431
Query: 900 RKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 957
R++ + + V D L++++ S+S A+L+KYE +F GS+
Sbjct: 432 RRINGLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYEKWMVEF-GSA 488
>RGD|1359252 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0007283 "spermatogenesis" evidence=ISO]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1359252
GO:GO:0005524 GO:GO:0005737 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005874 HOVERGEN:HBG057074
CTD:84056 KO:K07767 OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 GeneTree:ENSGT00550000074466 EMBL:BC083673
IPI:IPI00370842 RefSeq:NP_001006957.1 RefSeq:XP_003751164.1
RefSeq:XP_003752600.1 UniGene:Rn.208215 ProteinModelPortal:Q5XIK7
PRIDE:Q5XIK7 Ensembl:ENSRNOT00000001219 GeneID:100910196
GeneID:288449 KEGG:rno:100910196 KEGG:rno:288449 UCSC:RGD:1359252
InParanoid:Q5XIK7 NextBio:628096 Genevestigator:Q5XIK7
GermOnline:ENSRNOG00000000916 Uniprot:Q5XIK7
Length = 488
Score = 440 (159.9 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 116/318 (36%), Positives = 174/318 (54%)
Query: 647 EDLVKAMERS-KKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGL 705
+DLV+A+ER RN P++ W+D+ LE+ KK + + V LP+ D F
Sbjct: 186 KDLVEALERDIVSRN---------PSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIR 236
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
R GVL+ GPPGTGKT+LAKAVATEC F +V L + Y GESEK VR +F+ AR
Sbjct: 237 RPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARF 296
Query: 766 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL------NDSSQDLFIIGA 819
P IF DE+DS+ RG S D RV S++L ++DG+ +D S+ + ++ A
Sbjct: 297 YAPTTIFIDEIDSICSRRGTS-DEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAA 355
Query: 820 SNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPP 879
+N P ID AL R R +K +Y+ + + R +LK R+ +L D+ L IA+K
Sbjct: 356 TNFPWDIDEALRR--RLEKRIYIPLPT-AKGRAELLKISLREVELDPDIHLEDIAEKTE- 411
Query: 880 NFTGADMYALCADAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLS 939
++GAD+ +C DA A +R++ + + V D L++++ S+S
Sbjct: 412 GYSGADITNICRDASLMAMRRRINGLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVS 471
Query: 940 MAELKKYELLRDQFEGSS 957
A+L+KYE +F GS+
Sbjct: 472 AADLEKYEKWMVEF-GSA 488
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 449 (163.1 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 98/252 (38%), Positives = 154/252 (61%)
Query: 651 KAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSG 710
+ M K R + L + V + DV G+++VK+ + + V+ + G R G
Sbjct: 136 RVMSFGKSR--AKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKG 193
Query: 711 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCV 770
VLL+G PGTGKTLLA+A+A E + F S+ G + + M++G VRD+F++A+ PC+
Sbjct: 194 VLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCI 253
Query: 771 IFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDP 828
+F DE+D++ RGA G GG +R ++Q+L E+DG N S++ + II A+NRPD++DP
Sbjct: 254 VFIDEIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFN-SNEGIIIIAATNRPDILDP 311
Query: 829 ALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYA 888
ALLRPGRFD+ + V D++ R+ +LK + L +DV L +A++ P FTGAD+
Sbjct: 312 ALLRPGRFDRHIVVDT-PDINGRKEILKVHVKGKPLGDDVDLDVLARRTP-GFTGADLAN 369
Query: 889 LCADAWFHAAKR 900
+ +A AA+R
Sbjct: 370 MVNEAALLAARR 381
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 449 (163.1 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 98/252 (38%), Positives = 154/252 (61%)
Query: 651 KAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSG 710
+ M K R + L + V + DV G+++VK+ + + V+ + G R G
Sbjct: 136 RVMSFGKSR--AKLHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKG 193
Query: 711 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCV 770
VLL+G PGTGKTLLA+A+A E + F S+ G + + M++G VRD+F++A+ PC+
Sbjct: 194 VLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCI 253
Query: 771 IFFDELDSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDP 828
+F DE+D++ RGA G GG +R ++Q+L E+DG N S++ + II A+NRPD++DP
Sbjct: 254 VFIDEIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFN-SNEGIIIIAATNRPDILDP 311
Query: 829 ALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYA 888
ALLRPGRFD+ + V D++ R+ +LK + L +DV L +A++ P FTGAD+
Sbjct: 312 ALLRPGRFDRHIVVDT-PDINGRKEILKVHVKGKPLGDDVDLDVLARRTP-GFTGADLAN 369
Query: 889 LCADAWFHAAKR 900
+ +A AA+R
Sbjct: 370 MVNEAALLAARR 381
>FB|FBgn0040208 [details] [associations]
symbol:Kat60 "Katanin 60" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;IDA;IMP;NAS]
[GO:0007017 "microtubule-based process" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA;IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0070462 "plus-end specific microtubule depolymerization"
evidence=IMP] [GO:0000091 "mitotic anaphase A" evidence=IMP]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IGI] [GO:0035220 "wing disc development"
evidence=IGI] [GO:0031122 "cytoplasmic microtubule organization"
evidence=IMP] [GO:0007019 "microtubule depolymerization"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IMP] [GO:0031252
"cell leading edge" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005938 GO:GO:0005813
GO:GO:0005694 GO:GO:0031252 GO:GO:0030336 GO:GO:0022416
GO:GO:0035220 GO:GO:0000070 HSSP:Q01853 eggNOG:COG0464
GO:GO:0008017 GO:GO:0008568 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0031122 GO:GO:0000091 GO:GO:0070462
GO:GO:0008352 EMBL:AY071142 ProteinModelPortal:Q8SZ40 SMR:Q8SZ40
STRING:Q8SZ40 PaxDb:Q8SZ40 PRIDE:Q8SZ40 FlyBase:FBgn0040208
InParanoid:Q8SZ40 OrthoDB:EOG4573NX ChiTaRS:katanin-60
ArrayExpress:Q8SZ40 Bgee:Q8SZ40 Uniprot:Q8SZ40
Length = 572
Score = 439 (159.6 bits), Expect = 2.3e-40, P = 2.3e-40
Identities = 108/293 (36%), Positives = 159/293 (54%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKA 727
K P V+W D+ L D K+ + + V LP+L D F R GVL+ GPPGTGKT+LAKA
Sbjct: 286 KDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKA 345
Query: 728 VATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASG 787
VATEC F +V L + Y GESEK VR +F+ AR P IF DE+DSL RG+
Sbjct: 346 VATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRRGSES 405
Query: 788 DSGGVMDRVVSQMLAEIDGLNDSSQD---LFIIGASNRPDLIDPALLRPGRFDKLLYVGV 844
+ RV S++L ++DG+ + + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 406 EHEASR-RVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRR--RLEKRIYIPL 462
Query: 845 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLX 904
SD RE +LK R+ K+ + V L +A + ++GAD+ +C +A + +RK+
Sbjct: 463 PSDEG-REALLKINLREVKVDDSVDLTYVANELK-GYSGADITNVCREASMMSMRRKIAG 520
Query: 905 XXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 957
+ + V DF + + + S+S A+L KYE +F GSS
Sbjct: 521 LTPEQIRQLATEEVDLPVSNKDFNEAMSRCNKSVSRADLDKYEKWMREF-GSS 572
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 436 (158.5 bits), Expect = 4.8e-40, P = 4.8e-40
Identities = 93/254 (36%), Positives = 148/254 (58%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
LV + + S L + P+V + D+GG + K+ I + V+LPL H +L+ G+
Sbjct: 129 LVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDP 188
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVLLYGPPGTGKT+LAKAVA + F+ V G E + Y+GE + VRD+F+ A+
Sbjct: 189 PRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 248
Query: 768 PCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
P +IF DE+D++A AR A + + R++ ++L ++DG D + ++ +I A+NR D +
Sbjct: 249 PAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTL 307
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
DPALLRPGR D+ + + D + V + T K L ++V L + P + A++
Sbjct: 308 DPALLRPGRLDRKIEFPL-PDRRQKRLVFQVCTSKMNLSDEVDLEDYVSR-PDKISAAEI 365
Query: 887 YALCADAWFHAAKR 900
A+C +A HA ++
Sbjct: 366 AAICQEAGMHAVRK 379
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 435 (158.2 bits), Expect = 6.2e-40, P = 6.2e-40
Identities = 93/254 (36%), Positives = 149/254 (58%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
LV + + LGA + P+ + D+GG + K+ + + V+LPL H +L+ G+
Sbjct: 124 LVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDP 183
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVLLYGPPGTGKT+LAKAVA S F+ V G E + Y+GE + VRD+F+ AR
Sbjct: 184 PRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENS 243
Query: 768 PCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
P +IF DE+D++A R A + + R++ ++L ++DG D S ++ +I A+NR D +
Sbjct: 244 PAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGF-DVSVNVKVIMATNRQDTL 302
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
DPALLRPGR D+ + + D + + + +T K L ++V L + P +GA++
Sbjct: 303 DPALLRPGRLDRKIEFPL-PDRRQKRLIFQVITSKMNLSDEVDLEDYVSR-PDKLSGAEI 360
Query: 887 YALCADAWFHAAKR 900
++C +A HA ++
Sbjct: 361 QSICQEAGMHAIRK 374
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 435 (158.2 bits), Expect = 6.2e-40, P = 6.2e-40
Identities = 95/238 (39%), Positives = 152/238 (63%)
Query: 668 KVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 726
KVP+ +E VGGL+ + I + ++LP+ H +LF + G+ + GVLLYGPPGTGKTLLA+
Sbjct: 136 KVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLAR 195
Query: 727 AVA--TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 784
AVA TEC+ F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+ AR
Sbjct: 196 AVAHHTECT--FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARL 253
Query: 785 ASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVG 843
+G + R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D K+ +
Sbjct: 254 ETGTGDSEVQRTMLELLNQLDGF-EATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPP 312
Query: 844 VNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
N + R +LK +RK L ++L IA++ P +GA++ +C +A +A + +
Sbjct: 313 PNEEA--RLDILKIHSRKMNLTRGINLRKIAEEMP-GASGAEVKGVCTEAGMYALRER 367
>TAIR|locus:2034230 [details] [associations]
symbol:ERH3 "ECTOPIC ROOT HAIR 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043622 "cortical microtubule organization" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0009832 GO:GO:0005874 GO:GO:0043622 GO:GO:0009825
GO:GO:0010091 EMBL:AC018848 KO:K07767 HAMAP:MF_03023
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:AF358779 EMBL:AF359248
EMBL:AF048706 EMBL:AB044785 EMBL:AY059919 EMBL:BT000149
IPI:IPI00547205 PIR:B96835 RefSeq:NP_178151.1 UniGene:At.11879
ProteinModelPortal:Q9SEX2 SMR:Q9SEX2 IntAct:Q9SEX2 STRING:Q9SEX2
PaxDb:Q9SEX2 PRIDE:Q9SEX2 EnsemblPlants:AT1G80350.1 GeneID:844375
KEGG:ath:AT1G80350 GeneFarm:2769 TAIR:At1g80350 InParanoid:Q9SEX2
PhylomeDB:Q9SEX2 ProtClustDB:CLSN2691706 BRENDA:3.6.4.3
Genevestigator:Q9SEX2 GermOnline:AT1G80350 Uniprot:Q9SEX2
Length = 523
Score = 435 (158.2 bits), Expect = 6.2e-40, P = 6.2e-40
Identities = 103/296 (34%), Positives = 169/296 (57%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 729
P V+W+DV GL + K+ + + V LPL + F R GVL++GPPGTGKTLLAKAVA
Sbjct: 234 PGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVA 293
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
TEC F +V L + + GESE+ VR +F AR+ P IF DE+DSL +RG SG+
Sbjct: 294 TECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEH 353
Query: 790 GGVMDRVVSQMLAEIDGLNDSS--QD-----LFIIGASNRPDLIDPALLRPGRFDKLLYV 842
RV S++L ++DG+++++ +D + ++ A+N P ID AL R R +K +Y+
Sbjct: 354 ESSR-RVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYI 410
Query: 843 GVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKV 902
+ D R+ ++ R ++ DV++ +A++ ++G D+ +C DA + +RK+
Sbjct: 411 PL-PDFESRKALININLRTVEVASDVNIEDVARRTE-GYSGDDLTNVCRDASMNGMRRKI 468
Query: 903 LXXXXXXXXXRI-DQADSVVVEYDDFVKVLRELSPSLSMAELKKYELLRDQFEGSS 957
D + V DF + +R++ PS+S ++++K+E +F GS+
Sbjct: 469 AGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHEKWLSEF-GSA 523
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 434 (157.8 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 91/239 (38%), Positives = 150/239 (62%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 728
P+V + DVGG ++ + + + V+LPLL + F G+ G+LLYGPPGTGKTL A+AV
Sbjct: 181 PDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAV 240
Query: 729 ATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR---GA 785
A F+ V G EL+ Y+GE + VR++F+ AR+ + C+IFFDE+D++ AR GA
Sbjct: 241 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGA 300
Query: 786 SGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN 845
GD+ + R + +++ ++DG D ++ ++ A+NRP+ +DPALLRPGR D+ + +
Sbjct: 301 GGDNE--VQRTMLELITQLDGF-DPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSL- 356
Query: 846 SDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHA--AKRKV 902
D+ R + + ++ + +D+ I++ CP N TGA++ ++C +A A A+RKV
Sbjct: 357 PDLEGRANIFRIHSKTMSVEKDIRWELISRLCP-NATGAELRSVCTEAGMFAIRARRKV 414
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 434 (157.8 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 119/359 (33%), Positives = 194/359 (54%)
Query: 553 LTEQQRVEMLSQLLQP-VSELTSDTGSEEFVKDIIGQ--TSGFMPR---DLHALVADA-G 605
L EQ+ ++ L QP V E + + E+ ++++ G T G + D HA+V+ G
Sbjct: 69 LMEQEFLQNYD-LNQPKVDENSKEQADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVG 127
Query: 606 ANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALG 665
+ S VDK++ L A V N N +++ V+ E V M + +
Sbjct: 128 PEHYVRIMSFVDKSK---LYLGATVLLN-NKTLSVVGVIDGE--VDPM-------VNVMK 174
Query: 666 APKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLL 724
K P + D+GGLE + + + ++LPL H +L+ G++ GV+LYG PGTGKTLL
Sbjct: 175 VEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLL 234
Query: 725 AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARG 784
AKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRY 294
Query: 785 ASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYV 842
S SGG + R + ++L ++DG D+ D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 295 DS-QSGGEREIQRTMLELLNQLDGF-DARTDVKVIMATNRIETLDPALIRPGRIDRKIEF 352
Query: 843 GVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D+ + ++ + T K L EDV+L + +GAD+ A+C ++ A + +
Sbjct: 353 PL-PDIKTKRKIFEIHTAKMNLSEDVNLEEFVMS-KDDLSGADIKAICTESGLLALRER 409
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 434 (157.8 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 90/254 (35%), Positives = 154/254 (60%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
++ + + A+ + P+ + D+GGL+ + +++ + LP+LHK+ F G++
Sbjct: 160 IIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKP 219
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVL++GPPGTGKTLLA+A A++ + FL + GP+L+ M+IG+ K VRD F A+
Sbjct: 220 PKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKA 279
Query: 768 PCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
P +IF DELD++ R S SG + R + ++L ++DG + + + +I A+NRPD +
Sbjct: 280 PAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFS-TDDTVKVIAATNRPDTL 338
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
DPALLR GR D+ + + ++ S R R+L+ +RK + +DV+ +A+ +F GA +
Sbjct: 339 DPALLRSGRLDRKIELPHPNEES-RARILQIHSRKMNVHKDVNFEELARSTD-DFNGAQL 396
Query: 887 YALCADAWFHAAKR 900
A+C +A A +R
Sbjct: 397 KAVCVEAGMIALRR 410
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 434 (157.8 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 90/254 (35%), Positives = 154/254 (60%)
Query: 649 LVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
++ + + A+ + P+ + D+GGL+ + +++ + LP+LHK+ F G++
Sbjct: 160 IIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKP 219
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVL++GPPGTGKTLLA+A A++ + FL + GP+L+ M+IG+ K VRD F A+
Sbjct: 220 PKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKA 279
Query: 768 PCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
P +IF DELD++ R S SG + R + ++L ++DG + + + +I A+NRPD +
Sbjct: 280 PAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFS-TDDTVKVIAATNRPDTL 338
Query: 827 DPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADM 886
DPALLR GR D+ + + ++ S R R+L+ +RK + +DV+ +A+ +F GA +
Sbjct: 339 DPALLRSGRLDRKIELPHPNEES-RARILQIHSRKMNVHKDVNFEELARSTD-DFNGAQL 396
Query: 887 YALCADAWFHAAKR 900
A+C +A A +R
Sbjct: 397 KAVCVEAGMIALRR 410
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 434 (157.8 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 116/310 (37%), Positives = 170/310 (54%)
Query: 598 HALVADA-GANLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME 654
HA+V+ + G S VDK+ EPG S L HN S+ ++ +D V M
Sbjct: 123 HAIVSSSVGPEYYVGILSFVDKDQLEPGCSILM----HNKVLSVVG--IL--QDEVDPM- 173
Query: 655 RSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLL 713
S + K P + D+GGLE + I + V+LPL H +L+ G++ GV+L
Sbjct: 174 ------VSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVIL 227
Query: 714 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 773
YG PGTGKTLLAKAVA S FL V G ELI Y+G+ K VR++F+ A P ++F
Sbjct: 228 YGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFI 287
Query: 774 DELDSLAPARGASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALL 831
DE+D++ R +SGG + R + ++L ++DG DS D+ +I A+NR + +DPALL
Sbjct: 288 DEIDAVGTKR-YDANSGGEREIQRTMLELLNQLDGF-DSRGDVKVILATNRIESLDPALL 345
Query: 832 RPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCA 891
RPGR D+ + + D+ R R+ + T K L EDV+L F+GAD+ A+C
Sbjct: 346 RPGRIDRKIEFPL-PDIKTRRRIFQIHTSKMTLAEDVNLEEFVMT-KDEFSGADIKAICT 403
Query: 892 DAWFHAAKRK 901
+A A + +
Sbjct: 404 EAGLLALRER 413
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 434 (157.8 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 105/315 (33%), Positives = 172/315 (54%)
Query: 596 DLHALVADAGANL---IRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMG-KEDLVK 651
DL + GAN+ +K+ V K + V D + ++G +D
Sbjct: 91 DLEDNTEEEGANVDLDAQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYL 150
Query: 652 AMERSKKRNASALGAPKV---PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
+E+ S + A +V P ++ D+GG + + +++ V LP+ HKD F + G+
Sbjct: 151 ILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHP 210
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVL+YGPPGTGKT++A+AVA + FL + GP+L+ M+IG+ K VRD F A+
Sbjct: 211 PKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 270
Query: 768 PCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
P +IF DELD++ R S +G + R + ++L ++DG + D+ +I A+NR D++
Sbjct: 271 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPND-DIKVIAATNRIDVL 329
Query: 827 DPALLRPGRFDKLLYVG-VNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGAD 885
DPALLR GR D+ + + N D R R+++ +RK + +DV+ +A+ C +F GA
Sbjct: 330 DPALLRSGRLDRKIELPHPNEDA--RARIMQIHSRKMNVNKDVNFEELAR-CTDDFNGAQ 386
Query: 886 MYALCADAWFHAAKR 900
A+C +A A +R
Sbjct: 387 CKAVCVEAGMIALRR 401
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 434 (157.8 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 105/315 (33%), Positives = 172/315 (54%)
Query: 596 DLHALVADAGANL---IRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMG-KEDLVK 651
DL + GAN+ +K+ V K + V D + ++G +D
Sbjct: 91 DLEDNTEEEGANVDLDAQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYL 150
Query: 652 AMERSKKRNASALGAPKV---PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRK 707
+E+ S + A +V P ++ D+GG + + +++ V LP+ HKD F + G+
Sbjct: 151 ILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHP 210
Query: 708 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 767
GVL+YGPPGTGKT++A+AVA + FL + GP+L+ M+IG+ K VRD F A+
Sbjct: 211 PKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 270
Query: 768 PCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLI 826
P +IF DELD++ R S +G + R + ++L ++DG + D+ +I A+NR D++
Sbjct: 271 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPND-DIKVIAATNRIDVL 329
Query: 827 DPALLRPGRFDKLLYVG-VNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGAD 885
DPALLR GR D+ + + N D R R+++ +RK + +DV+ +A+ C +F GA
Sbjct: 330 DPALLRSGRLDRKIELPHPNEDA--RARIMQIHSRKMNVNKDVNFEELAR-CTDDFNGAQ 386
Query: 886 MYALCADAWFHAAKR 900
A+C +A A +R
Sbjct: 387 CKAVCVEAGMIALRR 401
>ZFIN|ZDB-GENE-050522-514 [details] [associations]
symbol:katna1 "katanin p60 (ATPase-containing)
subunit A 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IMP]
[GO:0048675 "axon extension" evidence=IGI;IMP] [GO:0030496
"midbody" evidence=ISS] [GO:0000922 "spindle pole" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-050522-514
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 HSSP:Q01853 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0048676 EMBL:BX255904
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 CTD:11104 OrthoDB:EOG4CJVGZ
EMBL:BC095321 IPI:IPI00500630 RefSeq:NP_001018440.1
UniGene:Dr.78566 ProteinModelPortal:Q5RII9
Ensembl:ENSDART00000043316 GeneID:553631 KEGG:dre:553631
InParanoid:Q5RII9 OMA:IMERDIL NextBio:20880368 Bgee:Q5RII9
Uniprot:Q5RII9
Length = 485
Score = 434 (157.8 bits), Expect = 7.9e-40, P = 7.9e-40
Identities = 106/283 (37%), Positives = 158/283 (55%)
Query: 670 PNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 729
PNV W+D+ LE+ KK + + V LP+ + F R GVL+ GPPGTGKTLLAKAVA
Sbjct: 199 PNVTWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVA 258
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
TEC F +V L + Y GESEK VR +F+ AR P IF DE+DS+ RG S +
Sbjct: 259 TECRTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS-EE 317
Query: 790 GGVMDRVVSQMLAEIDGL-----NDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 844
RV +++L ++DG+ ND S+ + ++ A+N P ID AL R R +K +Y+ +
Sbjct: 318 HEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPL 375
Query: 845 NSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLX 904
S R +LK ++ L DV++ IA++ ++GAD+ +C DA A +R++
Sbjct: 376 PS-AKGRVDLLKINLKELDLANDVNMDKIAEQME-GYSGADITNVCRDASLMAMRRRIEG 433
Query: 905 XXXXXXXXRIDQADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
+ +DF L+++S S+S A+L+KYE
Sbjct: 434 LTPEEIRNLPKDEMHMPTTMEDFETALKKVSKSVSAADLEKYE 476
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 447 (162.4 bits), Expect = 8.5e-40, P = 8.5e-40
Identities = 97/231 (41%), Positives = 146/231 (63%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATE 731
V++ DV G ++ K+ +++ V+ + G R GVLL GPPGTGKTLLA+AVA E
Sbjct: 159 VRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGE 218
Query: 732 CSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG 791
+ F S+ G + + M++G VRD+F+ A+ PC+IF DE+D++ RGA G GG
Sbjct: 219 AGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGA-GLGGG 277
Query: 792 VMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVS 849
+R ++Q+L E+DG +++ + II A+NRPD++DPALLRPGRFD+ + V DV+
Sbjct: 278 HDEREQTLNQLLVEMDGFG-ANEGIIIIAATNRPDILDPALLRPGRFDRQITVD-RPDVN 335
Query: 850 YRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
RE VLK R L E+++L +IA + P F+GAD+ L +A AA++
Sbjct: 336 GREAVLKVHARNKPLDENINLRAIATRTP-GFSGADLENLLNEAALVAARQ 385
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 419 (152.6 bits), Expect = 8.8e-40, Sum P(2) = 8.8e-40
Identities = 113/388 (29%), Positives = 200/388 (51%)
Query: 516 IEKICRQQVLLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSD 575
I I ++ LL+ A + L ++ H+ G L E + E L +L + + +D
Sbjct: 3 IPDIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSEND 60
Query: 576 TGSEEFVKDIIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGESDLTAKVAHN 633
+ + V I+G+ + + + A G + ++DK++ PG +VA
Sbjct: 61 LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG-----TRVAL- 114
Query: 634 DNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQL 693
D +++ + + +E V + + NV + ++GGL + + + + ++L
Sbjct: 115 DMTTLTIMRYLPRE--VDPLVYNMSHEDPG-------NVSYSEIGGLSEQIRELREVIEL 165
Query: 694 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 752
PL + +LF G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES
Sbjct: 166 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 225
Query: 753 EKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSS 811
+ +R++F AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+
Sbjct: 226 ARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTL 284
Query: 812 QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLY 871
+ +I A+NRPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y
Sbjct: 285 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-Y 342
Query: 872 SIAKKCPPNFTGADMYALCADAWFHAAK 899
K F GAD+ +C +A A +
Sbjct: 343 EAIVKLSDGFNGADLRNVCTEAGMFAIR 370
Score = 41 (19.5 bits), Expect = 8.8e-40, Sum P(2) = 8.8e-40
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 916 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
+AD V +DF+K +R+++ S + Y+
Sbjct: 370 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 401
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 418 (152.2 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 111/379 (29%), Positives = 196/379 (51%)
Query: 525 LLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKD 584
LL+ A + L ++ H+ G L E + E L +L + + +D + + V
Sbjct: 4 LLIMADPRDKALQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSENDLKALQSVGQ 61
Query: 585 IIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGESDLTAKVAHNDNSSIAATQ 642
I+G+ + + + A G + ++DK++ PG +VA D +++ +
Sbjct: 62 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG-----TRVAL-DMTTLTIMR 115
Query: 643 VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
+ +E V + + NV + ++GGL + + + + ++LPL + +LF
Sbjct: 116 YLPRE--VDPLVYNMSHEDPG-------NVSYSEIGGLSEQIRELREVIELPLTNPELFQ 166
Query: 703 S-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQ 761
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 167 RVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFN 226
Query: 762 KARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGAS 820
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+
Sbjct: 227 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMAT 285
Query: 821 NRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPN 880
NRPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K
Sbjct: 286 NRPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDG 343
Query: 881 FTGADMYALCADAWFHAAK 899
F GAD+ +C +A A +
Sbjct: 344 FNGADLRNVCTEAGMFAIR 362
Score = 41 (19.5 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 916 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
+AD V +DF+K +R+++ S + Y+
Sbjct: 362 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 393
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 418 (152.2 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 111/379 (29%), Positives = 196/379 (51%)
Query: 525 LLVAAADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKD 584
LL+ A + L ++ H+ G L E + E L +L + + +D + + V
Sbjct: 12 LLIMADPRDKALQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSENDLKALQSVGQ 69
Query: 585 IIGQTSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGESDLTAKVAHNDNSSIAATQ 642
I+G+ + + + A G + ++DK++ PG +VA D +++ +
Sbjct: 70 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG-----TRVAL-DMTTLTIMR 123
Query: 643 VMGKEDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFS 702
+ +E V + + NV + ++GGL + + + + ++LPL + +LF
Sbjct: 124 YLPRE--VDPLVYNMSHEDPG-------NVSYSEIGGLSEQIRELREVIELPLTNPELFQ 174
Query: 703 S-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQ 761
G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F
Sbjct: 175 RVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFN 234
Query: 762 KARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGAS 820
AR +PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+
Sbjct: 235 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMAT 293
Query: 821 NRPDLIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPN 880
NRPD +DPALLRPGR D+ +++ + ++ + R +LK ++ Y K
Sbjct: 294 NRPDTLDPALLRPGRLDRKIHIDLPNEQA-RLDILKIHAGPITKHGEID-YEAIVKLSDG 351
Query: 881 FTGADMYALCADAWFHAAK 899
F GAD+ +C +A A +
Sbjct: 352 FNGADLRNVCTEAGMFAIR 370
Score = 41 (19.5 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 916 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
+AD V +DF+K +R+++ S + Y+
Sbjct: 370 RADHDFVVQEDFMKAVRKVADSKKLESKLDYK 401
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 416 (151.5 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 88/231 (38%), Positives = 140/231 (60%)
Query: 671 NVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 729
N+ + VGGL D + + ++++LPL++ +LF G++ GVLLYGPPGTGKTLLA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 730 TECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDS 789
+ NFL V +I+ YIGES + +R++F AR +PC+IF DE+D++ R + G S
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 790 GG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
+ R + ++L ++DG D + +I A+NRPD++DPALLRPGR D+ + + + ++
Sbjct: 255 ADREIQRTLMELLNQLDGF-DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
S R +LK ++ Y K F GAD+ +C +A A +
Sbjct: 314 S-RMEILKIHASGIAKHGEID-YEAIVKLGEGFNGADLRNICTEAGMFAIR 362
Score = 43 (20.2 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 916 QADSVVVEYDDFVKVLRELSPSLSMAELKKY 946
+A+ V ++DF+K +R+LS + + Y
Sbjct: 362 RAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 416 (151.5 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 111/375 (29%), Positives = 195/375 (52%)
Query: 529 AADSSEGLPPTIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQ 588
A + +GL ++ H+ G L E + E L +L + + +D + + V I+G+
Sbjct: 2 AENREKGLQDYRKKLLEHKEIDGRLKELR--EQLKELTKQYEKSENDLKALQSVGQIVGE 59
Query: 589 TSGFMPRDLHALVADAGANLIRKSNSEVDKNE--PGESDLTAKVAHNDNSSIAATQVMGK 646
+ + + A G + ++DK++ PG +VA D +++ + + +
Sbjct: 60 VLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPG-----TRVAL-DMTTLTIMRYLPR 113
Query: 647 EDLVKAMERSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GL 705
E S + S V + ++GGL + + + + ++LPL + +LF G+
Sbjct: 114 EVDPLVYNMSHEDPGS---------VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 164
Query: 706 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARS 765
G LLYGPPGTGKTLLA+AVA++ NFL V +++ YIGES + +R++F AR
Sbjct: 165 IPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD 224
Query: 766 ARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPD 824
+PC+IF DE+D++ R + G S + R + ++L ++DG D+ + +I A+NRPD
Sbjct: 225 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGF-DTLHRVKMIMATNRPD 283
Query: 825 LIDPALLRPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGA 884
+DPALLRPGR D+ +++ + ++ + R +LK + D+ Y K F GA
Sbjct: 284 TLDPALLRPGRLDRKIHIELPNEQA-RLDILKIHSGPITKHGDID-YEAIVKLSDGFNGA 341
Query: 885 DMYALCADAWFHAAK 899
D+ +C +A A +
Sbjct: 342 DLRNVCTEAGMFAIR 356
Score = 43 (20.2 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 916 QADSVVVEYDDFVKVLRELSPSLSMAELKKYE 947
+AD V +DF+K +R+++ S + Y+
Sbjct: 356 RADHEYVTQEDFMKAVRKVADSKKLESKLDYK 387
>POMBASE|SPAC31G5.19 [details] [associations]
symbol:abo1 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISM] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC31G5.19 GO:GO:0005524 EMBL:CU329670
GO:GO:0006357 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000157282 OrthoDB:EOG473T0K PIR:T38636
RefSeq:NP_594020.1 ProteinModelPortal:O14114 STRING:O14114
EnsemblFungi:SPAC31G5.19.1 GeneID:2543084 KEGG:spo:SPAC31G5.19
OMA:ITRIMAN NextBio:20804112 Uniprot:O14114
Length = 1190
Score = 458 (166.3 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 129/406 (31%), Positives = 214/406 (52%)
Query: 539 TIRRCFSHEISMGPLTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIGQ-TSGFMPRDL 597
T R +S ++ P+ E + SQ+ Q S T SE + ++ Q S FMP
Sbjct: 151 TSRINYSVPLAFPPVDEMDG-DPSSQVNQSRSRKTH---SELAITKLLRQQVSSFMP--- 203
Query: 598 HALVADAGANLIRKSNSEVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSK 657
D+ + N+ + K+ S T K A D ++ G D + E+S
Sbjct: 204 ---YIDSSGSESESDNTRIKKS----SAKTIK-ALTDPANSG-----GPPDFGRIREKSD 250
Query: 658 KRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGP 716
++ LG ++ +E VGGL++ + + V LPLL+ ++F ++ GVL +GP
Sbjct: 251 LADSDPLGVDS--SLSFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGP 308
Query: 717 PGTGKTLLAKAVATECS-----LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVI 771
PGTGKTL+A+A+A CS ++F KG + ++ ++GE+E+ +R +F++A+S +P +I
Sbjct: 309 PGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSII 368
Query: 772 FFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALL 831
FFDE+D LAP R + + + +VS +LA +DG+ Q + IIGA+NRPD +DPAL
Sbjct: 369 FFDEIDGLAPVRSSKQEQ--IHASIVSTLLALMDGMESRGQ-VIIIGATNRPDAVDPALR 425
Query: 832 RPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCA 891
RPGRFD+ Y + D R+++++ TR + L S+ + + GAD+ ALC
Sbjct: 426 RPGRFDREFYFPL-PDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCT 484
Query: 892 DAWFHAAKRKVLXXXXXXXXXRIDQADSVVVEYDDFVKVLRELSPS 937
+A ++ KR +ID ++ V+ DFV ++ + PS
Sbjct: 485 EAALNSIKRTYPQLYRSTKRLQIDPK-TIKVKVKDFVMSMKRMIPS 529
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 445 (161.7 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 97/233 (41%), Positives = 148/233 (63%)
Query: 672 VKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 730
V ++DV G+++ K+ + + V L + F++ G + GVLL GPPGTGKTLLAKA+A
Sbjct: 169 VMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 227
Query: 731 ECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSG 790
E + F S+ G E + M++G VRD+F+KA+ PC+IF DE+D++ RGA G G
Sbjct: 228 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGA-GIGG 286
Query: 791 GVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDV 848
G +R ++Q+L E+DG + + + II A+NRPD++D AL+RPGRFD+ + V D
Sbjct: 287 GNDEREQTLNQLLTEMDGF-EGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDA-PDY 344
Query: 849 SYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
S R+ +L+ R KL +VS+ SIA++ P F+GAD+ L +A A+R+
Sbjct: 345 SGRKEILEVHARNKKLAPEVSIDSIARRTP-GFSGADLANLLNEAAILTARRR 396
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 443 (161.0 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 102/251 (40%), Positives = 153/251 (60%)
Query: 658 KRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGP 716
K A L ++ + DV G ++ K+ + + V L F G R SG+LL G
Sbjct: 138 KSKARQLSEEQIKTT-FADVAGCDEAKEDVAELVDY-LREPSRFQKLGGRIPSGILLVGQ 195
Query: 717 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDEL 776
PGTGKTLLAKA+A E + F ++ G + + M++G VRD+F++A+ A PC+IF DE+
Sbjct: 196 PGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEI 255
Query: 777 DSLAPARGASGDSGGVMDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPG 834
D++ RGA G GG +R ++QML E+DG + ++ + +I A+NRPD++DPALLRPG
Sbjct: 256 DAVGRQRGA-GMGGGHDEREQTLNQMLVEMDGF-EGNEGVIVIAATNRPDVLDPALLRPG 313
Query: 835 RFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAW 894
RFD+ + VG+ D+ RE++LK RK L +DV IA+ P F+GAD+ L +A
Sbjct: 314 RFDRQVTVGL-PDIRGREQILKVHMRKVPLGDDVKAEVIARGTP-GFSGADLANLVNEAA 371
Query: 895 FHAAK--RKVL 903
AA+ R+V+
Sbjct: 372 LCAARTARRVV 382
Score = 48 (22.0 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 225 LIKLGLQSVGQLPKYASHLRVSFV 248
L+K G+++ G+LP+ S L FV
Sbjct: 83 LVKQGVRAEGKLPEETSFLTTIFV 106
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 431 (156.8 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 104/288 (36%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+VDK PG DL + D+ I T + VKAME +K P ++
Sbjct: 123 DVDKLRPG--DLVG--INKDSYIILDTLPPEYDSRVKAMEIDEK-----------PTEEY 167
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ V LP+ HK+ F S G++ GVL+YGPPGTGKTLLA+A A + +
Sbjct: 168 SDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTN 227
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
+L + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S SG
Sbjct: 228 STYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDRE 287
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG + S ++ +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 288 VQRTMLELLNQLDGFS-SDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEA-RA 345
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
+L+ +RK + DV+ +A+ +F GA + A+C +A A +R
Sbjct: 346 HILQIHSRKMNVSADVNFDELARSSE-DFNGAQLKAVCVEAGMIALRR 392
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 431 (156.8 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 91/240 (37%), Positives = 144/240 (60%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S L + P++ + D+GGL+ K+ I + V+LPL H L+ G+ GVLL+GPPG G
Sbjct: 139 SMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCG 198
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KT+LAKAVA + +F+ V G E + Y+GE + VRD+F+ A+ P +IF DE+D++A
Sbjct: 199 KTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIA 258
Query: 781 PAR-GASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 839
R A + + R++ ++L ++DG D + ++ +I A+NR D +DPALLRPGR D+
Sbjct: 259 TKRFDAQTGADREVQRILLELLNQMDGF-DETTNIKVIMATNRADTLDPALLRPGRLDRK 317
Query: 840 LYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
+ + + D + V +T K + EDV L I + P + AD+ A+C +A HA +
Sbjct: 318 IELPL-PDRRQKRLVFTTITSKMNVGEDVDLEDIIAR-PDKISNADINAICQEAGMHAVR 375
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 431 (156.8 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 90/240 (37%), Positives = 146/240 (60%)
Query: 663 ALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGK 721
A+ + P + D+GGLE + +++ + LP+ HK+ F G+R GVLLYGPPGTGK
Sbjct: 158 AMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGK 217
Query: 722 TLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAP 781
TL+A+A A + + FL + GP+L+ M+IG+ K VRD F A+ PC+IF DE+D++
Sbjct: 218 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGT 277
Query: 782 ARGASGDSGG-VMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLL 840
R S SG + R + ++L ++DG + S + +I A+NR D++DPAL+R GR D+ +
Sbjct: 278 KRFDSEVSGDREVQRTMLELLNQLDGFS-SDDRIKVIAATNRADILDPALMRSGRLDRKI 336
Query: 841 YVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
++ + R R+L+ +RK + DV+ +A+ +F GA + A+C +A A +R
Sbjct: 337 EFPHPTEEA-RGRILQIHSRKMNVNADVNFEELARSTD-DFNGAQLKAVCVEAGMLALRR 394
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 431 (156.8 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 116/310 (37%), Positives = 169/310 (54%)
Query: 598 HALVADA-GANLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAME 654
HA+V+ + G S VDK+ EPG S L HN S+ ++ +D V M
Sbjct: 123 HAIVSSSVGPEYYVGILSFVDKDQLEPGCSILM----HNKVLSVVG--IL--QDEVDPM- 173
Query: 655 RSKKRNASALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLL 713
S + K P + D+GGLE + I + V+LPL H +L+ G++ GV+L
Sbjct: 174 ------VSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVIL 227
Query: 714 YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFF 773
YG PGTGKTLLAKAVA S FL V G ELI Y+G+ K VR++F+ A P ++F
Sbjct: 228 YGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFI 287
Query: 774 DELDSLAPARGASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALL 831
DE+D++ R SGG + R + ++L ++DG DS D+ +I A+NR + +DPALL
Sbjct: 288 DEIDAVGTKR-YDAHSGGEREIQRTMLELLNQLDGF-DSRGDVKVILATNRIESLDPALL 345
Query: 832 RPGRFDKLLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCA 891
RPGR D+ + + D+ R R+ + T K L EDV+L F+GAD+ A+C
Sbjct: 346 RPGRIDRKIEFPL-PDIKTRRRIFQIHTSKMTLSEDVNLEEFVMT-KDEFSGADIKAICT 403
Query: 892 DAWFHAAKRK 901
+A A + +
Sbjct: 404 EAGLLALRER 413
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 87 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 131
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 132 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 191
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 192 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 251
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 252 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 309
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 310 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 356
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 91 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 135
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 136 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 195
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 196 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 255
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 256 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 313
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 314 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 360
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 141 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 185
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 186 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 245
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 246 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 305
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 306 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 363
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 364 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 99 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 143
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 144 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 203
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 204 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 263
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 264 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 321
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 322 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 368
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 141 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 185
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 186 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 245
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 246 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 305
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 306 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 363
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 364 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 148 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 192
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 193 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 252
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 253 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 312
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 313 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 370
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 371 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 417
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 106 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 150
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 151 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 210
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 211 ATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDRE 270
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 271 VQRTMLELLNQLDGFQPTTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 328
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 329 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGIIALRR 375
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 144 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 188
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 189 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 248
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 249 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 308
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 309 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 366
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 367 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 413
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 141 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 185
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 186 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 245
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 246 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 305
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 306 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 363
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 364 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 166/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 144 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 188
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 189 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 248
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 249 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 308
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG ++Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 309 VQRTMLELLNQLDGFQPNTQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 366
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 367 RIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAVCVEAGMIALRR 413
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 430 (156.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 100/288 (34%), Positives = 165/288 (57%)
Query: 615 EVDKNEPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASALGAPKVPNVKW 674
+ +K +PG DL + D+ I T + VKAME ++ P ++
Sbjct: 129 DAEKLKPG--DLVG--VNKDSYLILETLPTEYDSRVKAMEVDER-----------PTEQY 173
Query: 675 EDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS 733
D+GGL+ + +++ + LP+ HK+ F + G++ GVL+YGPPGTGKTLLA+A A +
Sbjct: 174 SDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTK 233
Query: 734 LNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGG-V 792
FL + GP+L+ M+IG+ K VRD F A+ P +IF DELD++ R S +G
Sbjct: 234 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 293
Query: 793 MDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSYRE 852
+ R + ++L ++DG + Q + +I A+NR D++DPALLR GR D+ + + ++ + R
Sbjct: 294 VQRTMLELLNQLDGFQPNMQ-VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA-RA 351
Query: 853 RVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKR 900
R+++ +RK + DV+ +A+ C +F GA A+C +A A +R
Sbjct: 352 RIMQIHSRKMNVCPDVNFEELAR-CTDDFNGAQCKAVCVEAGMIALRR 398
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 429 (156.1 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 119/360 (33%), Positives = 195/360 (54%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADA-GA 606
L E++ + Q+ +P+ E + S+ V D+ G + G + D HA+V+ + G+
Sbjct: 72 LMEEEFIRNQEQM-KPLEEKQEEERSK--VDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 128
Query: 607 NLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL 664
S VDK+ EPG S L H ++ + + LV M+
Sbjct: 129 EHYVSILSFVDKDLLEPGCSVLLNHKVH----AVIGVLMDDTDPLVTVMK---------- 174
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
K P + D+GGL++ + I ++V+LPL H + + G++ GV+LYGPPGTGKTL
Sbjct: 175 -VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 233
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LAKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 234 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 293
Query: 784 GASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
S +SGG + R + ++L ++DG DS D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 294 YDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 351
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D ++R+ + T + L +DV+L + + +GAD+ A+C +A A + +
Sbjct: 352 FPL-PDEKTKKRIFQIHTSRMTLADDVTLDELIM-AKDDLSGADIKAICTEAGLMALRER 409
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 429 (156.1 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 119/360 (33%), Positives = 195/360 (54%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADA-GA 606
L E++ + Q+ +P+ E + S+ V D+ G + G + D HA+V+ + G+
Sbjct: 71 LMEEEFIRNQEQM-KPLEEKQEEERSK--VDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 127
Query: 607 NLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL 664
S VDK+ EPG S L H ++ + + LV M+
Sbjct: 128 EHYVSILSFVDKDLLEPGCSVLLNHKVH----AVIGVLMDDTDPLVTVMK---------- 173
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
K P + D+GGL++ + I ++V+LPL H + + G++ GV+LYGPPGTGKTL
Sbjct: 174 -VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 232
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LAKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 233 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 292
Query: 784 GASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
S +SGG + R + ++L ++DG DS D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 293 YDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 350
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D ++R+ + T + L +DV+L + + +GAD+ A+C +A A + +
Sbjct: 351 FPL-PDEKTKKRIFQIHTSRMTLADDVTLDELIM-AKDDLSGADIKAICTEAGLMALRER 408
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 429 (156.1 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 119/360 (33%), Positives = 195/360 (54%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADA-GA 606
L E++ + Q+ +P+ E + S+ V D+ G + G + D HA+V+ + G+
Sbjct: 73 LMEEEFIRNQEQM-KPLEEKQEEERSK--VDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 129
Query: 607 NLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL 664
S VDK+ EPG S L H ++ + + LV M+
Sbjct: 130 EHYVSILSFVDKDLLEPGCSVLLNHKVH----AVIGVLMDDTDPLVTVMK---------- 175
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
K P + D+GGL++ + I ++V+LPL H + + G++ GV+LYGPPGTGKTL
Sbjct: 176 -VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LAKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 784 GASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
S +SGG + R + ++L ++DG DS D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 295 YDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D ++R+ + T + L +DV+L + + +GAD+ A+C +A A + +
Sbjct: 353 FPL-PDEKTKKRIFQIHTSRMTLADDVTLDDLIM-AKDDLSGADIKAICTEAGLMALRER 410
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 429 (156.1 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 119/360 (33%), Positives = 195/360 (54%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADA-GA 606
L E++ + Q+ +P+ E + S+ V D+ G + G + D HA+V+ + G+
Sbjct: 73 LMEEEFIRNQEQM-KPLEEKQEEERSK--VDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 129
Query: 607 NLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL 664
S VDK+ EPG S L H ++ + + LV M+
Sbjct: 130 EHYVSILSFVDKDLLEPGCSVLLNHKVH----AVIGVLMDDTDPLVTVMK---------- 175
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
K P + D+GGL++ + I ++V+LPL H + + G++ GV+LYGPPGTGKTL
Sbjct: 176 -VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LAKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 784 GASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
S +SGG + R + ++L ++DG DS D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 295 YDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D ++R+ + T + L +DV+L + + +GAD+ A+C +A A + +
Sbjct: 353 FPL-PDEKTKKRIFQIHTSRMTLADDVTLDDLIM-AKDDLSGADIKAICTEAGLMALRER 410
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 429 (156.1 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 119/360 (33%), Positives = 195/360 (54%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADA-GA 606
L E++ + Q+ +P+ E + S+ V D+ G + G + D HA+V+ + G+
Sbjct: 73 LMEEEFIRNQEQM-KPLEEKQEEERSK--VDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 129
Query: 607 NLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL 664
S VDK+ EPG S L H ++ + + LV M+
Sbjct: 130 EHYVSILSFVDKDLLEPGCSVLLNHKVH----AVIGVLMDDTDPLVTVMK---------- 175
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
K P + D+GGL++ + I ++V+LPL H + + G++ GV+LYGPPGTGKTL
Sbjct: 176 -VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LAKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 784 GASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
S +SGG + R + ++L ++DG DS D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 295 YDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D ++R+ + T + L +DV+L + + +GAD+ A+C +A A + +
Sbjct: 353 FPL-PDEKTKKRIFQIHTSRMTLADDVTLDDLIM-AKDDLSGADIKAICTEAGLMALRER 410
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 429 (156.1 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 119/360 (33%), Positives = 195/360 (54%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADA-GA 606
L E++ + Q+ +P+ E + S+ V D+ G + G + D HA+V+ + G+
Sbjct: 73 LMEEEFIRNQEQM-KPLEEKQEEERSK--VDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 129
Query: 607 NLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL 664
S VDK+ EPG S L H ++ + + LV M+
Sbjct: 130 EHYVSILSFVDKDLLEPGCSVLLNHKVH----AVIGVLMDDTDPLVTVMK---------- 175
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
K P + D+GGL++ + I ++V+LPL H + + G++ GV+LYGPPGTGKTL
Sbjct: 176 -VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LAKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 784 GASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
S +SGG + R + ++L ++DG DS D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 295 YDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D ++R+ + T + L +DV+L + + +GAD+ A+C +A A + +
Sbjct: 353 FPL-PDEKTKKRIFQIHTSRMTLADDVTLDDLIM-AKDDLSGADIKAICTEAGLMALRER 410
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 429 (156.1 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 119/360 (33%), Positives = 195/360 (54%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADA-GA 606
L E++ + Q+ +P+ E + S+ V D+ G + G + D HA+V+ + G+
Sbjct: 73 LMEEEFIRNQEQM-KPLEEKQEEERSK--VDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 129
Query: 607 NLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL 664
S VDK+ EPG S L H ++ + + LV M+
Sbjct: 130 EHYVSILSFVDKDLLEPGCSVLLNHKVH----AVIGVLMDDTDPLVTVMK---------- 175
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
K P + D+GGL++ + I ++V+LPL H + + G++ GV+LYGPPGTGKTL
Sbjct: 176 -VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LAKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 784 GASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
S +SGG + R + ++L ++DG DS D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 295 YDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D ++R+ + T + L +DV+L + + +GAD+ A+C +A A + +
Sbjct: 353 FPL-PDEKTKKRIFQIHTSRMTLADDVTLDDLIM-AKDDLSGADIKAICTEAGLMALRER 410
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 429 (156.1 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 119/360 (33%), Positives = 195/360 (54%)
Query: 553 LTEQQRVEMLSQLLQPVSELTSDTGSEEFVKDIIG--QTSGFMPR---DLHALVADA-GA 606
L E++ + Q+ +P+ E + S+ V D+ G + G + D HA+V+ + G+
Sbjct: 73 LMEEEFIRNQEQM-KPLEEKQEEERSK--VDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 129
Query: 607 NLIRKSNSEVDKN--EPGESDLTAKVAHNDNSSIAATQVMGKEDLVKAMERSKKRNASAL 664
S VDK+ EPG S L H ++ + + LV M+
Sbjct: 130 EHYVSILSFVDKDLLEPGCSVLLNHKVH----AVIGVLMDDTDPLVTVMK---------- 175
Query: 665 GAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTL 723
K P + D+GGL++ + I ++V+LPL H + + G++ GV+LYGPPGTGKTL
Sbjct: 176 -VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234
Query: 724 LAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPAR 783
LAKAVA + S FL V G ELI Y+G+ K VR++F+ A P ++F DE+D++ R
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
Query: 784 GASGDSGGVMD--RVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLY 841
S +SGG + R + ++L ++DG DS D+ +I A+NR + +DPAL+RPGR D+ +
Sbjct: 295 YDS-NSGGEREIQRTMLELLNQLDGF-DSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 842 VGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRK 901
+ D ++R+ + T + L +DV+L + + +GAD+ A+C +A A + +
Sbjct: 353 FPL-PDEKTKKRIFQIHTSRMTLADDVTLDDLIM-AKDDLSGADIKAICTEAGLMALRER 410
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 417 (151.9 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 93/243 (38%), Positives = 147/243 (60%)
Query: 662 SALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTG 720
S + KVP+ +E +GGL+ K I + ++LP+ H + F + G+ + GVLLYGPPGTG
Sbjct: 131 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTG 190
Query: 721 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 780
KTLLA+AVA F+ V G EL+ +IGE + VR++F AR P +IF DE+DS+
Sbjct: 191 KTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 250
Query: 781 PA-RGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFD-K 838
G SG V R + ++L ++DG ++++++ +I A+NR D++D ALLRPGR D K
Sbjct: 251 SRLEGGSGGDSEVQ-RTMLELLNQLDGF-EATKNIKVIMATNRIDILDSALLRPGRIDRK 308
Query: 839 LLYVGVNSDVSYRERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAA 898
+ + N + R +LK +RK L ++L IA+ P +GA++ +C +A +A
Sbjct: 309 IEFPPPNEEA--RLDILKIHSRKMNLTRGINLRKIAELMP-GASGAEVKGVCTEAGMYAL 365
Query: 899 KRK 901
+ +
Sbjct: 366 RER 368
Score = 38 (18.4 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 466 DVFRNLVSNESLPNDQVGLSSE 487
DV +N+ N+ PN +V L ++
Sbjct: 93 DVDKNIDINDVTPNCRVALRND 114
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 444 (161.4 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 97/229 (42%), Positives = 144/229 (62%)
Query: 674 WEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATEC 732
+ DV G ++ K+ + + V L F G + +GVL+ GPPGTGKTLLAKA+A E
Sbjct: 155 FSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEA 213
Query: 733 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 792
+ F ++ G + + M++G VRD+F++A+ A PC+IF DE+D++ RGA G GG
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGA-GVGGGH 272
Query: 793 MDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
+R ++QML E+DG + ++ + +I A+NRPD++DPALLRPGRFD+ + VG+ DV
Sbjct: 273 DEREQTLNQMLVEMDGF-EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGL-PDVRG 330
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
RE++LK RK L DV IA+ P F+GAD+ L +A AA+
Sbjct: 331 REQILKVHMRKVPLANDVEPSLIARGTP-GFSGADLANLVNEAALFAAR 378
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 444 (161.4 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 97/229 (42%), Positives = 144/229 (62%)
Query: 674 WEDVGGLEDVKKSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATEC 732
+ DV G ++ K+ + + V L F G + +GVL+ GPPGTGKTLLAKA+A E
Sbjct: 155 FSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEA 213
Query: 733 SLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGV 792
+ F ++ G + + M++G VRD+F++A+ A PC+IF DE+D++ RGA G GG
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGA-GVGGGH 272
Query: 793 MDR--VVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDVSY 850
+R ++QML E+DG + ++ + +I A+NRPD++DPALLRPGRFD+ + VG+ DV
Sbjct: 273 DEREQTLNQMLVEMDGF-EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGL-PDVRG 330
Query: 851 RERVLKALTRKFKLLEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 899
RE++LK RK L DV IA+ P F+GAD+ L +A AA+
Sbjct: 331 REQILKVHMRKVPLANDVEPSLIARGTP-GFSGADLANLVNEAALFAAR 378
WARNING: HSPs involving 472 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 958 937 0.00092 122 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 722
No. of states in DFA: 615 (65 KB)
Total size of DFA: 387 KB (2190 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 84.72u 0.11s 84.83t Elapsed: 00:00:04
Total cpu time: 84.80u 0.11s 84.91t Elapsed: 00:00:04
Start: Tue May 21 16:29:28 2013 End: Tue May 21 16:29:32 2013
WARNINGS ISSUED: 2