Query 002162
Match_columns 958
No_of_seqs 262 out of 1233
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 17:55:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002162.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002162hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1959 Glycosyl hydrolase, fa 100.0 1E-216 2E-221 1803.8 76.4 921 5-957 58-996 (996)
2 PLN02701 alpha-mannosidase 100.0 1E-170 2E-175 1560.7 90.2 884 15-955 63-1050(1050)
3 KOG1958 Glycosyl hydrolase, fa 100.0 5E-151 1E-155 1273.9 53.2 868 13-954 184-1128(1129)
4 PRK09819 alpha-mannosidase; Pr 100.0 6E-101 1E-105 952.9 75.7 799 15-953 26-875 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 8.1E-83 1.8E-87 693.0 41.2 734 14-954 302-1078(1078)
6 COG0383 AMS1 Alpha-mannosidase 100.0 5.7E-51 1.2E-55 497.7 32.2 690 15-953 220-942 (943)
7 PF01074 Glyco_hydro_38: Glyco 100.0 5.6E-51 1.2E-55 445.2 23.6 249 15-297 22-275 (275)
8 PF07748 Glyco_hydro_38C: Glyc 100.0 8.2E-45 1.8E-49 427.0 40.1 429 433-951 1-457 (457)
9 PF09261 Alpha-mann_mid: Alpha 99.8 2.9E-22 6.3E-27 174.6 3.3 75 302-376 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.8 1.4E-20 3.1E-25 163.5 5.9 74 303-376 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 99.4 6.5E-15 1.4E-19 181.7 -2.5 330 18-378 29-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 98.3 2.3E-06 5.1E-11 97.3 9.3 123 18-142 28-197 (360)
13 COG1543 Uncharacterized conser 96.3 0.0087 1.9E-07 67.2 7.5 122 16-139 75-207 (504)
14 PF01522 Polysacc_deac_1: Poly 95.5 0.15 3.2E-06 48.1 11.3 105 19-136 17-123 (123)
15 TIGR03212 uraD_N-term-dom puta 94.3 4.8 0.0001 44.4 20.3 112 17-142 74-187 (297)
16 COG1449 Alpha-amylase/alpha-ma 92.7 3.1 6.8E-05 50.5 16.7 98 36-136 161-263 (615)
17 TIGR03006 pepcterm_polyde poly 91.4 1.6 3.5E-05 47.3 11.2 112 16-139 24-139 (265)
18 TIGR02764 spore_ybaN_pdaB poly 91.1 2.8 6.1E-05 42.9 12.3 102 22-136 21-124 (191)
19 TIGR02884 spore_pdaA delta-lac 90.6 2.8 6E-05 44.3 11.8 102 23-136 53-156 (224)
20 TIGR02873 spore_ylxY probable 88.0 6.6 0.00014 42.7 12.6 102 21-135 99-202 (268)
21 PRK14582 pgaB outer membrane N 72.5 1E+02 0.0022 38.0 16.3 151 58-263 168-347 (671)
22 PF08672 APC2: Anaphase promot 67.1 6.7 0.00014 32.0 3.3 23 54-76 36-58 (60)
23 PRK15394 4-deoxy-4-formamido-L 65.0 2.2E+02 0.0049 31.4 16.4 81 58-142 92-176 (296)
24 PRK14581 hmsF outer membrane N 64.9 23 0.0005 43.4 8.7 115 18-141 117-276 (672)
25 PF07481 DUF1521: Domain of Un 54.2 98 0.0021 30.4 9.0 95 543-652 8-103 (171)
26 TIGR03826 YvyF flagellar opero 38.9 19 0.00041 34.7 1.9 50 17-73 27-76 (137)
27 PRK10148 hypothetical protein; 29.6 20 0.00043 35.1 0.4 17 108-124 123-139 (147)
28 PF06044 DRP: Dam-replacing fa 29.0 81 0.0017 33.2 4.6 60 17-76 184-250 (254)
29 TIGR03593 yidC_nterm membrane 28.5 3.7E+02 0.0081 30.5 10.6 29 542-570 73-101 (366)
30 PF10074 DUF2285: Uncharacteri 25.0 14 0.0003 34.1 -1.6 28 47-77 75-102 (106)
31 PF13289 SIR2_2: SIR2-like dom 24.4 4.2E+02 0.0092 24.9 8.7 86 35-135 57-142 (143)
32 PF00538 Linker_histone: linke 20.1 2.8E+02 0.0062 23.6 5.7 32 42-73 24-65 (77)
No 1
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.9e-217 Score=1803.80 Aligned_cols=921 Identities=50% Similarity=0.827 Sum_probs=835.8
Q ss_pred EEeeccccccchhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCC
Q 002162 5 LMINGMVYMQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAP 84 (958)
Q Consensus 5 ~~~g~~~~~~~~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~ 84 (958)
.|||++|.||+++|++|||+||++|.+||+|||+++|++||.+||++|+++.|+.||+||++|||||+||||||+|||++
T Consensus 58 yy~G~~n~Iq~AgVqyIldSVV~eLl~dp~RRFI~VE~aFF~rWW~~qS~~~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~ 137 (996)
T KOG1959|consen 58 YYYGSKNKIQHAGVQYILDSVVEELLKDPNRRFIYVETAFFARWWNEQSETQKEQVKKLVNEGRLEFIGGGWSMNDEATT 137 (996)
T ss_pred heecCCcccchhhHHHHHHHHHHHHhcCCccceehhhHHHHHHHHHhcCHHHHHHHHHHHhcCCEEEecCeeeecchhhh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHcC--CCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeC
Q 002162 85 HYIDMIDQTTLGHRYIKEQFN--VTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRAS 162 (958)
Q Consensus 85 ~~es~Irql~~G~~~l~~~fG--~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~ 162 (958)
||.|+|+||+.||+||.++|| .+|++||||||||||+.+|+|| ++|||++++|+||||++|+.|..++.|||+|+|+
T Consensus 138 hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAslf-AqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S 216 (996)
T KOG1959|consen 138 HYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQASLF-AQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGS 216 (996)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHHHH-HHhCccchheeecchhhHHHHHhhccceEEeecC
Confidence 999999999999999999999 7999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCceeEEeCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCC
Q 002162 163 KSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKY 242 (958)
Q Consensus 163 d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y 242 (958)
+++++.++|||++|+.|||+| +|||||.+|.+.|++|++.+.++||++|++.|++..+.++.+|+|||||+|||+||+|
T Consensus 217 ~sL~~~~~iFTg~l~n~Y~~P-~gfc~dv~c~d~Pi~D~~~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY 295 (996)
T KOG1959|consen 217 ESLGSSSQIFTGALYNHYSPP-PGFCFDVLCGDDPIIDGPRSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQY 295 (996)
T ss_pred ccccchhhhhhhccccCCCCC-CCceeccccCCCCCCCCCCCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCcee
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhc---CC-CeEEEEcChhhHHHHHHhcCCCCCcccCCCccCCcCCCCceeeeeccchhhhHHH
Q 002162 243 QYAHTWFRQMDKFIHYVNQ---DG-RVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYV 318 (958)
Q Consensus 243 ~~a~~~~~~~~~li~~iN~---~~-~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~ 318 (958)
.+|..||+||||||+|+|+ .+ .+++.||||+||++++|+.+..||+++.|||||++++|.||||||||||.+|++.
T Consensus 296 ~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~~~~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~ 375 (996)
T KOG1959|consen 296 ENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHAANQTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFE 375 (996)
T ss_pred hhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHHhcCcccccccccCcCCCCCCcceeeeccccHHHHHHH
Confidence 9999999999999999994 34 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccc--CCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002162 319 RTMSAYYLAARQLEFFKGRNE--VGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTE 396 (958)
Q Consensus 319 R~~e~~L~~aE~l~~la~~~~--~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~ 396 (958)
|++++.|++|++|.++|++.. ..+.++.|+++|++.|||||||||+|++|.+||+++|..|+..|+++++.+|+.|..
T Consensus 376 R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~ 455 (996)
T KOG1959|consen 376 RDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTN 455 (996)
T ss_pred hhhhHHHHHHHHHhhhcCCCccccCccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999998754 568899999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCccccccCCcccccCCCCccccCCCCceEEEEEcCCCceEeEEEEEEEeCCcEEEEcCCCCEEEEEEeecc
Q 002162 397 FSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLL 476 (958)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~ln~s~c~~~~~~~~~~~~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~ 476 (958)
.. ...|++|.+||+|+||.++. .++++.|+|||||+|.++++|+|||+.+++.|+|+.|++|++|++|..
T Consensus 456 ~~-------~~~f~~C~~lNiS~C~~t~~---~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~ 525 (996)
T KOG1959|consen 456 LP-------NGEFQSCLLLNISECAFTKD---GADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVP 525 (996)
T ss_pred CC-------CccchhhhhhccccCCCCcC---CcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccc
Confidence 43 34799999999999999863 357789999999999999999999999999999999999999999987
Q ss_pred cccccccccccccccCCCCCCCCcEEEEEEEeeCCCceEEEEEEeCCccCCccccceeeeccccCCCceEEccCeEEEEE
Q 002162 477 KDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLY 556 (958)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~ 556 (958)
.....+. .......++|+|.+.|||+|+++|.|+....+...+ .+.+..........+.|+|+++++.|
T Consensus 526 ~~~~al~----------~~~~~~~~eLvf~asvpplg~aty~i~k~~~~~~~~-~~~~~~i~~~~~n~~~V~n~~~kl~f 594 (996)
T KOG1959|consen 526 WQVLALE----------SRNNDTKHELVFKASVPPLGIATYFIKKVASTERGS-ASHVRNIKKRESNATEVGNSHLKLVF 594 (996)
T ss_pred hhhhhhh----------ccccCCCceEEEEEEecCccceEEEEeecCcccccc-cccccccccccCcceEeccceEEEEE
Confidence 5433321 112345689999999999999999999655432210 01111111223334899999999999
Q ss_pred ECCCCcEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCCCccCCC-CCceEEEEeCCceEEEEEEEcCe
Q 002162 557 SGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPE-GQLSFTILRGPLLDEVHQRINPW 635 (958)
Q Consensus 557 ~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~~~~~~~-~~~~i~v~~Gpl~~~v~~~~~s~ 635 (958)
|.++|.++++....+|++..+.|+|.+|.++.|+++.+.||||+|+| +..++++. ....++|..|||+.||++.++.|
T Consensus 595 d~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAYiFRp-~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~w 673 (996)
T KOG1959|consen 595 DNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAYIFRP-GQADIPIVSDQVELTVVDGPLVKEVHQQFNPW 673 (996)
T ss_pred cCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcceEecC-CCCCccccccceEEEEecCchHHHHHHHHHHH
Confidence 98889999999888999999999999999998875678999999999 54444443 35788999999999999999999
Q ss_pred EEEEEEEecCCCceeEEEEEccccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCcccccCCcccccee
Q 002162 636 IYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYY 715 (958)
Q Consensus 636 i~q~irL~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyY 715 (958)
++|++|+|+|.+++||||.|+|||++++.|||++.||+|+|+|++.|||||||+||+||.+++|++|....++||+||||
T Consensus 674 iSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYY 753 (996)
T KOG1959|consen 674 ISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYY 753 (996)
T ss_pred HhheeEecCCCcceEEEEEecceecCCCccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceeeeeeCceeEEEEecCCccccccCCCeEEEEEEeeccCCCCcCccccccccccccccccCeEEEeEEEEeecCcc
Q 002162 716 PVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVG 795 (958)
Q Consensus 716 P~~s~~~I~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~ 795 (958)
||++.|||+|++.+|+|||||+|||||++||+||||||||+++||+|||||+|||+.++ ..||+++|+|++.++...
T Consensus 754 Pvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~---~~gL~~rGk~~~~l~~~~ 830 (996)
T KOG1959|consen 754 PVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYG---HAGLIARGKLYVLLDKAG 830 (996)
T ss_pred ccceeeEEecCCceEEEEeecccCCccccCCeEEEEeeehhhcccccccchhccccccc---ccceEEeeeEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999886 279999999999999887
Q ss_pred chh-hhccccchhhccCceeeeeccCCCccccccc-c--ccccCcccccCCCcceEEEeeecCCCcEEEEEeeccccccC
Q 002162 796 EAA-KWRRSFGQEIYSPFLLAFTEQDGDHWANSHL-A--TYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEED 871 (958)
Q Consensus 796 ~~~-~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~lp~~i~l~tl~~~~~~~~llRl~~~~~~~~~ 871 (958)
+.+ .++|..+.++..|.+.+|++..+..+..... + .|++ +..||.+|||+||++|+++.+||||+|+|+++||
T Consensus 831 d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~---~~~lP~~vhLlTLe~~~~~~vLlRleh~~e~gED 907 (996)
T KOG1959|consen 831 DGATGWRRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSG---SYDLPQSVHLLTLEEWSKDEVLLRLEHLYEVGED 907 (996)
T ss_pred ccchhhhhhhhhhcccHHHHHhhcCCCccchhhcCCCcccccc---ccCCCcceeeeecccCCCCceEeeehhhhhcccc
Confidence 665 5778889999999999999876543433221 2 2444 3589999999999999999999999999999999
Q ss_pred CCCceeeeeeccccCCCCccceEEeccccccchhhhhhccceeeeec-CCC---CCCCcccCCCCCCC-CCceEEecCcc
Q 002162 872 TDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVE-GSS---KEQPTAVRGSPVDP-AKLVVELAPME 946 (958)
Q Consensus 872 ~~~s~~~~v~l~~lf~~~~~~~i~E~sLt~~~~~~~~~~~r~~w~~~-~~~---~~~~~~~~~~~~~~-~~~~i~l~P~e 946 (958)
+++|++++|||.++|..+++..++||+|+||+++++| +|++|... .+. .....+.+..|+++ +.+.|+|.|||
T Consensus 908 ~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~m--kr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~Pme 985 (996)
T KOG1959|consen 908 SELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDM--KRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPME 985 (996)
T ss_pred cccCcceEEEhHHhhcccCeeEEEEeeccCccChhhh--hhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccE
Confidence 9999999999999999999999999999999999999 55555444 221 12223445666765 66899999999
Q ss_pred eeEEEEEEeec
Q 002162 947 IRTFVIEFYSE 957 (958)
Q Consensus 947 IrTf~i~~~~~ 957 (958)
||||+|+.+++
T Consensus 986 IRTfii~~~~~ 996 (996)
T KOG1959|consen 986 IRTFIIKFQQK 996 (996)
T ss_pred EEEEEEEEecC
Confidence 99999998764
No 2
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=1.1e-170 Score=1560.71 Aligned_cols=884 Identities=27% Similarity=0.455 Sum_probs=732.4
Q ss_pred chhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHH
Q 002162 15 VACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTT 94 (958)
Q Consensus 15 ~~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~ 94 (958)
+++|++||++||+.|++||+|||+|+|++||++||++++|+++++||+||++||||||||||||+|||++|||||||||+
T Consensus 63 ~~~~~~ild~vv~~L~~dp~rkFi~~E~~fl~~Ww~~~~pe~~~~vk~LV~~GrLE~vgGgwvm~DEa~~~~esiI~Ql~ 142 (1050)
T PLN02701 63 QEQSRHILDTIVESLSKDPRRKFIWEEMSYLERWWRDASPSKKEAFTKLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIT 142 (1050)
T ss_pred HHHHHHHHHHHHHHHHhCcCcceeeccHHHHHHHHHhcCHHHHHHHHHHHHcCCEEEECCceecccccccCHHHHHHHHH
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEE
Q 002162 95 LGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTG 174 (958)
Q Consensus 95 ~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th 174 (958)
+||+|++++||+.|++||+|||||||++||||| ++|||++++|+|++|++|..+..++.+||+|+++++..+|++||||
T Consensus 143 ~G~~~l~~~fG~~P~~~W~iDpFGhs~~~P~Ll-~~~G~~~~~~~R~~y~~k~~~~~~~~~eF~W~~s~~~~dgs~Ift~ 221 (1050)
T PLN02701 143 EGNMWLNDTIGVAPKNSWAIDPFGYSSTMAYLL-RRMGFENMLIQRTHYEVKKELAQNKNLEYIWRQSWDAEETTDIFVH 221 (1050)
T ss_pred hhhHHHHhhcCCCCCcCccCCCCCCCHHHHHHH-HhCCCceEEEeccchHHHHHHhhcCCceEEEeCCCCCCCCCEEEEE
Confidence 999999999999999999999999999999999 9999999999999999999999999999999998777679999999
Q ss_pred eCCC-CC-----CCCCCCCc--cccCC------CCCCccCCc-ccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCC
Q 002162 175 ISPK-NY-----EPPSDNFY--FEVGD------TSPIVQDDM-NLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTD 239 (958)
Q Consensus 175 ~~~~-~Y-----~~p~~~f~--f~~~~------~~~~~~~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~D 239 (958)
+||+ +| |+||++|| ||..+ ..|||.++| .++++||+++++.|++++++++..|+++++|+|+|+|
T Consensus 222 ~lp~y~Y~~p~~~~p~p~~c~~Fd~~~~~~~~~~~cp~~~~p~~~~~~nv~~r~~~~~~~~~~~s~~~rtn~iL~p~GdD 301 (1050)
T PLN02701 222 MMPFYSYDIPHTCGPEPAICCQFDFARMRGFQYELCPWGKHPVETNDENVQERAMKLLDQYRKKSTLYRTNTLLVPLGDD 301 (1050)
T ss_pred EccccccCcccccCCCcccccccccccccccccccCcccCCccccchhHHHHHHHHHHHHHHHhhccccCCeEEEecCCC
Confidence 9995 55 34446777 66543 135666554 5788999999999999999999999999999999999
Q ss_pred CCC---cchhHHHHHHHHHHHHHhcCC--CeEEEEcChhhHHHHHHhcC----------------CCCCcccCCCccCCc
Q 002162 240 FKY---QYAHTWFRQMDKFIHYVNQDG--RVNALYSTPSMYIDAKYAAN----------------ESWPLKTDDFFPYAD 298 (958)
Q Consensus 240 f~y---~~a~~~~~~~~~li~~iN~~~--~~~i~~sT~~~Yf~a~~~~~----------------~~~p~~~gDf~py~~ 298 (958)
|+| .+|..||+||++||+++|+++ .++++||||++||+++++.. ..||++.||||||++
T Consensus 302 f~~~~~~~a~~~f~n~dkli~~iN~~~~~~~~i~~ST~~~Yf~~l~~~~~~~~~~~~ge~~~~~~~~~p~~~gDff~Ya~ 381 (1050)
T PLN02701 302 FRYISIDEAEAQFRNYQKLFDYINSNPSLKAEVKFGTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFFTYAD 381 (1050)
T ss_pred CCCcchhHHHHHHHhHHHHHHHHhhCcccCceEEECCHHHHHHHHHhhhccccccccccccccccCCCceeccccccccc
Confidence 999 577889999999999999763 58999999999999998753 579999999999999
Q ss_pred CCCCceeeeeccchhhhHHHHHHHHHHHHHHHHHhhhcc--------ccC---CCchHHHHHHHHhhhccccccCccchh
Q 002162 299 RENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR--------NEV---GLSTDSLADALALVQHHDAVSGTEKQH 367 (958)
Q Consensus 299 ~~~~yWtG~yTSr~~~K~~~R~~e~~L~~aE~l~~la~~--------~~~---~~~~~~lw~~l~l~QhHD~ItGTs~~~ 367 (958)
+.++||||||||||.+|+++|++|++|++||+|+++|.. .++ .+.++.+||+|+++||||||||||+++
T Consensus 382 ~~~~yWTGyyTSRp~lK~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~~wk~l~~~QhHDaItGTsk~~ 461 (1050)
T PLN02701 382 RQQDYWSGYYVSRPFFKAVDRVLEQTLRAAEILFSFLLGYCRRFQCEKLPTSFSYKLTAARRNLALFQHHDGVTGTAKDH 461 (1050)
T ss_pred ccccccceeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCChhhHHHHHHHHHHHHhhccCcCcCccchHH
Confidence 999999999999999999999999999999999999521 233 245789999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCccccccC-CcccccCCCCcc-ccCCCCceEEEEEcCCCceE
Q 002162 368 VADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCP-LLNISYCPPSEV-DLSSGKSLVVVVYNPLGWKR 445 (958)
Q Consensus 368 V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~-~ln~s~c~~~~~-~~~~~~~~~v~v~Npl~~~r 445 (958)
|++||..||.+++..++.+++.+++.|+......+..+...|+.|. .+|++.||.+.. .+..++...|+|||||+|+|
T Consensus 462 V~~Dy~~rl~~~~~~~~~~~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r 541 (1050)
T PLN02701 462 VVVDYGTRMHTSLQDLQIFMSAAVEVLLGIRHEKSDQTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPLEQTR 541 (1050)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccccCCCceEEEEECCCCcee
Confidence 9999999999999999999999999998643222223334577784 468899987642 23344568899999999999
Q ss_pred eEEEEEEEeCCcEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEeeCCCceEEEEEEeCCcc
Q 002162 446 EDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQA 525 (958)
Q Consensus 446 ~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~ 525 (958)
+++|+|+|+.+.+.|+|.+|++|++|++|.+..... ......|+|+|.++||||||++|.|......
T Consensus 542 ~~vV~v~V~~~~~~V~d~~g~~v~~Qi~~~~~~~~~-------------~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~ 608 (1050)
T PLN02701 542 EEVVMVVVDRPAVCVFDSNWTCVPSQISPEWQHDGE-------------KLFTGRHRLYWKASVPALGLETYFIANGNVS 608 (1050)
T ss_pred eEEEEEEecCCcEEEEcCCCCEEeEEEecccccccc-------------ccccceEEEEEEEecCCceeEEEEEEEcCCC
Confidence 999999999999999999999999999987542110 0123468999999999999999999865322
Q ss_pred CCcccccee--------------eeccccCCCceEEccCeEEEEEECCCCcEEEEEecccceeeEEEEEEEEeecCCCCC
Q 002162 526 ASHSGMRTV--------------YKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSK 591 (958)
Q Consensus 526 ~~~~~~s~~--------------~~~~~~~~~~~~ieN~~~~v~~~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~ 591 (958)
......+.+ ........+.++|||++++|+||+++|.|++|++|++|++..+.++|.+|.+
T Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~lkl~Fd~~TG~L~si~~~~~g~~~~v~q~f~~Y~s----- 683 (1050)
T PLN02701 609 CEKAVPAKLKVFNSDDKFPCPEPYSCSKLEGDTVEISNSHQTLGFDVKTGLLRKIKIHKNGSETVVGEEIGMYSS----- 683 (1050)
T ss_pred cccccccccccccccccccccccccccccCCCcEEEecCeEEEEEcCCCCceeEEEecccCceecceeeeeeecC-----
Confidence 111000000 0000112345899999999999998999999999999999999999999973
Q ss_pred CCCCCcceEEccCCCCccCCCCCceEEEEeCCceEEEEEEE-----cCeEEEEEEEecC-----CCceeEEEEEcccccc
Q 002162 592 DLQPSGAYIFRPNGTYPIEPEGQLSFTILRGPLLDEVHQRI-----NPWIYQVTRVYKG-----KDHAEIEFTVGPIPID 661 (958)
Q Consensus 592 ~~~~sgAY~F~P~~~~~~~~~~~~~i~v~~Gpl~~~v~~~~-----~s~i~q~irL~~~-----~~~ie~e~~v~~i~~~ 661 (958)
+.||||+|+|++.+.-.......+.|++|||+++|++.+ +++++|++|||++ ...||+|++||+||.
T Consensus 684 --~~SGAYiFrP~~~~~p~~~~~~~~~v~~Gplv~eV~~~~~~~~~~s~isQ~iRLY~~~~~~~~~~vE~e~~V~~ip~- 760 (1050)
T PLN02701 684 --QGSGAYLFKPDGEAQPIVQAGGLVVVSEGPLVQEVHSVPKTKWEKSPLSRSTRLYHGGKSVQDLSVEKEYHVELLGH- 760 (1050)
T ss_pred --CCCcceEEcCCCCCcccCCCCceEEEEeCCEEEEEEEEeecccCCcceEEEEEEecCCCccccceEEEEEEecCccc-
Confidence 468999999987752212222345689999999999976 4789999999998 678999999999987
Q ss_pred CCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCcccccCCccccceeeccceeeeee-CceeEEEEecCCccc
Q 002162 662 DGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKD-NSSELSILVDRSVGG 740 (958)
Q Consensus 662 ~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D-~~~~ltvl~dr~~G~ 740 (958)
+..|||++|||.|+|+|+++||||+|||||+||+ +|+ ++|+++|||||++.|||+| ++.||||+|||++||
T Consensus 761 d~~~kEii~R~~T~i~s~~~FYTDsNG~qm~kR~-----~~~---~~Pv~gNYYPv~s~a~IqD~~~~rltvltdrs~G~ 832 (1050)
T PLN02701 761 DFNDKELIVRFKTDIDNKRVFYSDLNGFQMSRRE-----TYD---KIPLQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGV 832 (1050)
T ss_pred CCCCcEEEEEEeecccCCCeEEEcCccceeeeec-----ccc---cCccccccccccceEEEEcCCCCeEEEEeccCccc
Confidence 6789999999999999999999999999999996 343 6999999999999999999 668999999999999
Q ss_pred cccCCCeEEEEEEeeccCCCCcCccccccccccccccccCeEEEeEEEEeecCccchh------h------hccccchhh
Q 002162 741 SSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAA------K------WRRSFGQEI 808 (958)
Q Consensus 741 sS~~~G~iElml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~------~~r~~~~~l 808 (958)
||+++|+||||||||+++||+|||||||+|+. ++..+|+|++++..... . ..+..+..|
T Consensus 833 sSl~~GqLEiMLhRRLl~DD~rGvge~l~dnk---------~~~~~f~ll~e~~~~~~~~~~~~~~~~~Sl~sh~~~~~l 903 (1050)
T PLN02701 833 ASLKNGWLEIMLDRRLVQDDGRGLGQGVMDNR---------PMNVVFHLLLESNISSSPPASNPLPLQPSLLSHRVGAHL 903 (1050)
T ss_pred ccCCCcEEEEEEEeecccccCccccccccccc---------cccceEEEEEecccccCCCCCCCCcCCccHHHHHHHHhh
Confidence 99999999999999999999999999999985 46889999999654211 0 123456889
Q ss_pred ccCceeeeeccCCC-ccccccccccccCcccccCCCcceEEEeeecCCC-------------cEEEEEeeccccc--cCC
Q 002162 809 YSPFLLAFTEQDGD-HWANSHLATYSAMDTTYVLPDNVALITLQELDSG-------------KILLRLAHLYEIE--EDT 872 (958)
Q Consensus 809 ~~p~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~lp~~i~l~tl~~~~~~-------------~~llRl~~~~~~~--~~~ 872 (958)
++|+++++...... ........+|++|.. +||||+||+|||++.+. -+|+|.+-.+... ...
T Consensus 904 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~--~lpcD~hlv~lrt~~~~~~~~~~~~~~~~~~~l~r~~~d~~~~~~~~~ 981 (1050)
T PLN02701 904 NYPMHAFLAKKPQATSVENPQDTSFAPLAK--PLPCDLHIVNFKVPRPSKYSQQEAEDPRFGLLLQRRGWDSSYCRKGGT 981 (1050)
T ss_pred cCCchhhcccCccccccccccccccccccC--CCCCcEEEEEeeccCCcccccccCCCccEEEEEEecccCcccccCCCc
Confidence 99999887533221 111111267888764 89999999999976432 2777866333222 111
Q ss_pred CCce--eeeeeccccCCCCccceEEeccccccchhhhhhccceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEE
Q 002162 873 DLSV--MSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTF 950 (958)
Q Consensus 873 ~~s~--~~~v~l~~lf~~~~~~~i~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P~eIrTf 950 (958)
.++. ...|+|.+||.++.+..+.+||||..++..+|. .+...-+ . .++...|.|.||||+||
T Consensus 982 ~c~~~~~~~~~~~~lf~~l~~~~~~~tsl~~~~~~~~~~----~~~~~~~--------~----~~~~~~i~l~pmei~~~ 1045 (1050)
T PLN02701 982 QCTTLANEPVNLFDMFKDLAVSKVKATSLNLLHDDAEML----GYRKQAG--------S----AAQEGIVLISPMEIQAY 1045 (1050)
T ss_pred cCcccCCcccchhhhhcccceeeeecccccccccchhhc----ccccccc--------c----cCCccceeeccceeeeE
Confidence 2221 123999999999999999999999998776552 1111100 0 11234799999999999
Q ss_pred EEEEe
Q 002162 951 VIEFY 955 (958)
Q Consensus 951 ~i~~~ 955 (958)
+|+++
T Consensus 1046 ~~~~~ 1050 (1050)
T PLN02701 1046 KLDLR 1050 (1050)
T ss_pred EEecC
Confidence 99874
No 3
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-151 Score=1273.94 Aligned_cols=868 Identities=29% Similarity=0.460 Sum_probs=705.4
Q ss_pred ccchhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHH
Q 002162 13 MQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQ 92 (958)
Q Consensus 13 ~~~~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irq 92 (958)
+-+.+.++||++++..|.++|++||+|+|++||++||+.++|+.+++||+||++||||||+|||||||||.+||.++|+|
T Consensus 184 Yy~~~tr~Il~~~v~~L~e~~~~~FIwaEiS~~~~ww~~~~~~kk~a~k~lv~~GqlEIvtGGWVMpDEAn~Hy~~~i~q 263 (1129)
T KOG1958|consen 184 YYQRQTRHILNNMVNKLSEDPRMKFIWAEISFLERWWDDASPTKKNAVKRLVKNGQLEIVTGGWVMPDEANSHYFAMIDQ 263 (1129)
T ss_pred HHHHHHHHHHHHHHHHhhhCcccchhhhhHHHHHHhhhhcChHHHHHHHHHHhcCcEEEEeCccccCcccchhHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCcee
Q 002162 93 TTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIM 172 (958)
Q Consensus 93 l~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~ 172 (958)
+++||+||+.+.|++|++||.|||||||++||+|| +++||++++|+|+||..|..++..+++||+||+.|+..+.++||
T Consensus 264 liEGh~Wl~~~igv~P~s~WaiDPFG~S~TmpYLL-~~ag~~~mlIQRvHYavKk~lA~qk~leF~WRQ~wds~~~tDl~ 342 (1129)
T KOG1958|consen 264 LIEGHQWLKNNIGVTPQSGWAIDPFGYSSTMPYLL-RRAGFENMLIQRVHYAVKKELAQQKSLEFIWRQYWDSTGDTDLL 342 (1129)
T ss_pred HhhhhhHHhccCCCCCCcccccCCCCCCcchHHHH-hhcCchhHHHHHHHHHHHHHHHHhcccceeehhhccCCCCcchh
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999888889999
Q ss_pred EEeCCC-CCCCC---------CCCCccccCC---CCCCccC-CcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecC
Q 002162 173 TGISPK-NYEPP---------SDNFYFEVGD---TSPIVQD-DMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGT 238 (958)
Q Consensus 173 th~~~~-~Y~~p---------~~~f~f~~~~---~~~~~~~-~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~ 238 (958)
||+||+ +|+.| +++|||.+++ ..|||.- +..|++.||++||+.+++|+++.++.|++|.+|+|.||
T Consensus 343 tHmMPFysYDIphTCGPdP~ICCqFDFkRmpg~~~~Cpw~vpP~~It~~NVa~rA~~LldQyrKkS~Lfr~nVlLiPlGD 422 (1129)
T KOG1958|consen 343 THMMPFYSYDIPHTCGPDPKICCQFDFKRMPGGGCECPWGVPPEKITDANVAARAELLLDQYRKKSELFRTNVLLIPLGD 422 (1129)
T ss_pred eeecccccccCCCccCCCCceeeeeecccCCCCCcCCCCCCCCeeechhhHHHHHHHHHHHHHHHhhhcccceEEEecCC
Confidence 999998 78655 2689999875 3467744 44799999999999999999999999999999999999
Q ss_pred CCCCcchhHH---HHHHHHHHHHHhcC--CCeEEEEcChhhHHHHHHhc----C---CCCCcccCCCccCCcCCCCceee
Q 002162 239 DFKYQYAHTW---FRQMDKFIHYVNQD--GRVNALYSTPSMYIDAKYAA----N---ESWPLKTDDFFPYADRENAYWTG 306 (958)
Q Consensus 239 Df~y~~a~~~---~~~~~~li~~iN~~--~~~~i~~sT~~~Yf~a~~~~----~---~~~p~~~gDf~py~~~~~~yWtG 306 (958)
||||....+| |.|+.+|+++||+. .+++++|+|++|||+++++. + ..+|+++||||+|+|+.++||||
T Consensus 423 DFRy~~~~Ewd~Q~~NY~~LFD~iNs~~~~nv~aqFGTlsDYF~al~k~~~e~~kg~~~FPtlSGDFFtYaDr~d~YWSG 502 (1129)
T KOG1958|consen 423 DFRYDKITEWDQQFDNYQKLFDHINSRPLLNVQAQFGTLSDYFDALDKAYSERGKGQEPFPTLSGDFFTYADRDDHYWSG 502 (1129)
T ss_pred ccccCccHHHHHHHHHHHHHHHHHhcccccceeeecCCHHHHHHHHHHhhccccCCCCCCcccccCceeeecccCcccee
Confidence 9999977765 99999999999986 47889999999999999875 1 34799999999999999999999
Q ss_pred eeccchhhhHHHHHHHHHHHHHHHHHhhhcc-------c--cC---CCchHHHHHHHHhhhccccccCccchhhHHHHHH
Q 002162 307 YFTSRPALKGYVRTMSAYYLAARQLEFFKGR-------N--EV---GLSTDSLADALALVQHHDAVSGTEKQHVADDYAK 374 (958)
Q Consensus 307 ~yTSr~~~K~~~R~~e~~L~~aE~l~~la~~-------~--~~---~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~ 374 (958)
||||||.+|++.|.+|++||+||.++++|.. . .+ ...+.+|||+|+++|||||||||||++|+.||..
T Consensus 503 YyTSRPFyK~ldRvLeh~lR~AEIl~s~a~~~~~r~~~~~r~~~~~~~~L~~ARRnL~LFQHHDaITGTaK~~Vv~DYg~ 582 (1129)
T KOG1958|consen 503 YYTSRPFYKRLDRVLEHYLRSAEILFSLALAHAHRVGLAQRIEESNYELLTAARRNLGLFQHHDAITGTAKDAVVVDYGQ 582 (1129)
T ss_pred eeecchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHhhhhhhcccccccccchhhhhhHHH
Confidence 9999999999999999999999999986421 0 11 1357789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccC-CCCCCCCccccccCCc--ccccCCC-CccccCCCCceEEEEEcCCCceEeEEEE
Q 002162 375 RLSIGYTEAEKVVAASLACLTEFSK-NGCVNPITNFQQCPLL--NISYCPP-SEVDLSSGKSLVVVVYNPLGWKREDIIR 450 (958)
Q Consensus 375 rl~~~~~~~~~~~~~~l~~L~~~~~-~~~~~~~~~~~~~~~l--n~s~c~~-~~~~~~~~~~~~v~v~Npl~~~r~~~V~ 450 (958)
||..++..++.++.+++..|+.... ++...+.-.+-+.... +.+.-|. +-..+ +..+..|++||||++.|.++|+
T Consensus 583 rl~~Sl~~~~~v~~~~~~~Ll~~~~~~y~~~~~~~~~emd~~r~~~~~~pek~~~~~-~~~~~~vvlfN~l~q~R~evv~ 661 (1129)
T KOG1958|consen 583 RLHESLVNLQIVLENALELLLGKDSETYNSDPSHSFIEMDDIRDSEDSLPEKTVIGL-SSGPRSVVLFNPLEQEREEVVT 661 (1129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCCceehhhcccCCCcCcccceeec-cCCCceEEEeccchhhhhccEE
Confidence 9999999999999999999887542 2222222111111101 1111121 00112 2334689999999999999999
Q ss_pred EEEeCCcEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEeeCCCceEEEEEEeCCccCCccc
Q 002162 451 IPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSG 530 (958)
Q Consensus 451 i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~~~~~~ 530 (958)
|.|+.+.+.|.+..|++|++||.|+|..+... ......|.|.|.+.|||||..+|++..+..+.....
T Consensus 662 i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk------------~~~~~~~~l~f~a~vpplgl~v~~~~~~~~~~~~~l 729 (1129)
T KOG1958|consen 662 IRVNSPEVSVLDDGGVPVEAQISPVWQDTKTK------------TIKPGSYRLSFKATVPPLGLMVLRIDSGGLTEHAKL 729 (1129)
T ss_pred EEecCCeeEEEcCCCceeeEeeccceeccccc------------eeecceeEEEEEEecccceeeEEEeeccCccccccc
Confidence 99999999999999999999999999632110 012336899999999999999999987633221111
Q ss_pred cce---e-----eecc--ccCCCceEEccCeEEEEEECCCCcEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceE
Q 002162 531 MRT---V-----YKSQ--IRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYI 600 (958)
Q Consensus 531 ~s~---~-----~~~~--~~~~~~~~ieN~~~~v~~~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~ 600 (958)
.++ + .... ....+..+++|++.+|.||+.+|.|+++..+.++....+...|.-|....+ ++.||||.
T Consensus 730 ~s~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l~fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~~~~---~~~sgayl 806 (1129)
T KOG1958|consen 730 PSKDTSFPAWDLGSSSTIGDSRELSTLRNEYFELRFDPETGTIKSINSLSDNKHFESQVSFSNYGERIS---GDESGAYL 806 (1129)
T ss_pred ccCCCCcccCCCccceeecCccccceeeccceeEEeccccchhhhhhhcccCCCcccceeecccccccc---CCCCceEE
Confidence 111 0 0000 011224589999999999999999999988888888888888888865433 77899999
Q ss_pred EccCCCC-ccCCCCCceEEEEeCCceEEEEEEEcC---eEEEEEEEecCCCceeEEEEEccccccCCCCcEEEEEEEeec
Q 002162 601 FRPNGTY-PIEPEGQLSFTILRGPLLDEVHQRINP---WIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNM 676 (958)
Q Consensus 601 F~P~~~~-~~~~~~~~~i~v~~Gpl~~~v~~~~~s---~i~q~irL~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i 676 (958)
|.|+|++ ++.......|.+ +|+|+++|.+...+ ...|.+++|.|. .+|++..| ++.+..+.|+.|||.|++
T Consensus 807 f~p~G~a~~~i~~~~p~v~v-~g~L~qev~~~~~~v~~~~~~~~~~~~G~-~vei~~~v---di~~~~n~Ela~R~st~v 881 (1129)
T KOG1958|consen 807 FLPDGNAKPIIELQWPHVRV-KGPLVQEVSQFLKNVLHRLSQNVRGYSGE-EVEISNSV---DIRKEDNTELAMRFSTDV 881 (1129)
T ss_pred EccCCCCCCceecCCCeEEe-ecceeeeeccccchHHHhchhheeccCCc-ceeeecee---ecccccchhhhhhhhhcc
Confidence 9999984 543334456667 99999999987642 223788999887 67888777 466678999999999999
Q ss_pred cCCCeEEEcCCcccceecccccccCcccccCCccccceeeccceeeeeeCceeEEEEecCCccccccCCCeEEEEEEeec
Q 002162 677 ISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRL 756 (958)
Q Consensus 677 ~s~~~fytDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~ 756 (958)
++...||||+||+||+||.+. .+.|+++|||||.+++||+|.+.+|++++.+++|++|+.+|+||||++||+
T Consensus 882 ds~~~FyTDlnG~Q~~kR~~~--------~KlPlQaNyYPmpt~a~Iq~~~~RlsihS~q~lGvssL~sG~iEIm~DRrL 953 (1129)
T KOG1958|consen 882 DSGDLFYTDLNGMQMIKRRRL--------DKLPLQANYYPMPTAAFIQDAKQRLSIHSAQSLGVSSLESGQIEIMLDRRL 953 (1129)
T ss_pred cCCceeeeccchhhhhhhhhc--------ccCcccceeecccceeeeecCCceEEEEeecccCccccccceEEEEecccc
Confidence 999999999999999999764 478999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcCccccccccccccccccCeEEEeEEEEeecCccchhh------------hccccchhhccCceeeeeccCCCcc
Q 002162 757 VADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK------------WRRSFGQEIYSPFLLAFTEQDGDHW 824 (958)
Q Consensus 757 ~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------~~r~~~~~l~~p~~~~~~~~~~~~~ 824 (958)
.+||+||||+|+.|+- ++...|+|++++.+.+.. ..+...+.+++|+..++..... +
T Consensus 954 ~~DD~rGLgqGv~DNk---------~t~~~frlv~e~~~s~~~p~e~~~~~~ps~~ah~a~~~l~yP~~~f~~~~pk--~ 1022 (1129)
T KOG1958|consen 954 NQDDGRGLGQGVIDNK---------PTDMKFRLVLESLNSAQDPTENSRVSYPSLAAHLASQSLNYPLMKFIYAEPK--K 1022 (1129)
T ss_pred cCCCCccccccccccc---------hhhheeeeeecccccccCchhcCCCCChhhhhhcccceecCCchhhcccCCC--C
Confidence 9999999999998874 467789999987754211 1134557788999887633221 1
Q ss_pred ccccccccccCcccccCCCcceEEEeeecCCC--------cEEEEEeecccccc-CCCCceeeeeeccccCCCCccceEE
Q 002162 825 ANSHLATYSAMDTTYVLPDNVALITLQELDSG--------KILLRLAHLYEIEE-DTDLSVMSSVELKKVFPKKKISKVT 895 (958)
Q Consensus 825 ~~~~~~~~~~l~~~~~lp~~i~l~tl~~~~~~--------~~llRl~~~~~~~~-~~~~s~~~~v~l~~lf~~~~~~~i~ 895 (958)
.. ....|.++. .+|||++|++|++++.+. .||+|-+ ..|+. +...+....+++.+++.. +++++
T Consensus 1023 i~-~~g~~~~~~--~~lpcDl~lvt~rtl~~~~~~~~~~~lil~R~~--~~c~~~~~g~c~~~ki~~~~ll~~--~~~v~ 1095 (1129)
T KOG1958|consen 1023 IE-DQGIFEPLN--LSLPCDLHLVTFRTLESSKAAEKRAALILHRHA--TDCRSQKKGTCGQLKISVMDLLIK--AKSVK 1095 (1129)
T ss_pred hh-hcccccccc--CCCccceeEEEeeeccCcccccccceeeeeecc--cccccccccccccccCcHHHHHHH--HHhhc
Confidence 11 123355554 389999999999999754 3677743 44431 111122446777788876 88899
Q ss_pred eccccccchhhhhhccceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEEEEEE
Q 002162 896 EMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEF 954 (958)
Q Consensus 896 E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P~eIrTf~i~~ 954 (958)
.|+|++.+..... .++ ....++||||++|++.+
T Consensus 1096 ~tsLs~l~~~~~~----------------------~~~----~~~~~~pme~~~~l~~~ 1128 (1129)
T KOG1958|consen 1096 KTSLSLLQEVGGI----------------------IGV----EEQELSPMEISAFLTSL 1128 (1129)
T ss_pred hhhHHhhhhcccC----------------------CCc----ccccccccccccccccc
Confidence 9999988665332 111 14557999999998764
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=6.2e-101 Score=952.94 Aligned_cols=799 Identities=14% Similarity=0.171 Sum_probs=587.8
Q ss_pred chhHhhHHHHHHHHHHhCCCCeEEE--eeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHH
Q 002162 15 VACVQNVLDSLIPALVADKNRKFIY--VEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQ 92 (958)
Q Consensus 15 ~~~v~~il~~vl~~L~~~p~~kF~~--~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irq 92 (958)
+.++.++|++|+++|++||+++|.+ ++++++++|| +.+|+++++||+||++||| ++||||||+||+++||||+|||
T Consensus 26 ~~~~~~~~~~vl~lle~~p~~~f~~~d~q~~~l~~~~-~~~Pe~~~~ik~lV~~Grl-~~G~W~v~~D~~l~sgEsliRq 103 (875)
T PRK09819 26 RILLVNNMEEILDRLEQDNDYKYYVLDGQTSLLEDYL-AVKPEDKERVKKLVQAGKL-IIGPWYTQTDQLVVSGESIVRN 103 (875)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEchhHHHHHHHH-HhChHHHHHHHHHHHcCCE-eECcEEeecccccCCHHHHHHH
Confidence 3467899999999999999999865 3567776666 7899999999999999999 6788889999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCcee
Q 002162 93 TTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIM 172 (958)
Q Consensus 93 l~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~ 172 (958)
|++|++|+ ++||..|++||+|||||||++||||| ++|||+++++||+..+. ......+|+|+|+| ||+||
T Consensus 104 ll~G~~~~-~~fG~~~~vgwlpD~FG~s~~lPqIl-~~~Gi~~~~~wr~~~~~----~~~~~~~F~W~g~D----Gs~V~ 173 (875)
T PRK09819 104 LLYGIRDC-REFGEPMKIGYLPDSFGQSGQMPQIY-NGFGITRTLFWRGVSDR----HGTDKTEFLWQSDD----GSEVL 173 (875)
T ss_pred HHHHHHHH-HHcCCCCceeeecCCCCCcHHHHHHH-HhCCCCeEEEEeccccc----ccCCCceEEEECCC----CCeEE
Confidence 99999998 68999999999999999999999999 99999999999975311 11235689999999 99999
Q ss_pred EEeCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhHHHHHH
Q 002162 173 TGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQM 252 (958)
Q Consensus 173 th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~~~~~ 252 (958)
||++|.+|+.+ .. .+ ....+++++++.+++.+++ ...++++|+|+|+|+.+.. ++|
T Consensus 174 t~~~~~~Y~~g-~~-----~~----------~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~G~d~~p~~-----~~~ 229 (875)
T PRK09819 174 AQQLPLGYAIG-KY-----LP----------EDEEELKKRLDEYFGVLEK---KSSTKNILLPNGHDQMPLQ-----KNL 229 (875)
T ss_pred EEECccccccC-CC-----CC----------cCHHHHHHHHHHHHHHHhh---cCCCCcEEEecCCCCCccc-----ccH
Confidence 99999999765 11 10 1234666777777666644 3578999999999986543 467
Q ss_pred HHHHHHHhcC-CCeEEEEcChhhHHHHHHhcCCCCCcccCCCcc--CCcCCCCceeeeeccchhhhHHHHHHHHHHH-HH
Q 002162 253 DKFIHYVNQD-GRVNALYSTPSMYIDAKYAANESWPLKTDDFFP--YADRENAYWTGYFTSRPALKGYVRTMSAYYL-AA 328 (958)
Q Consensus 253 ~~li~~iN~~-~~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDf~p--y~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~-~a 328 (958)
.++++.+|+. +.+++++||+++||+++++....||++.|||+. |. ..| +||||||+.+|++||++|++|+ .+
T Consensus 230 ~e~i~~~~~~~~~~~~~~st~~~yf~~l~~~~~~lp~~~GEl~~~~y~-~~H---rG~~TSr~~iK~~nr~~E~~L~~~~ 305 (875)
T PRK09819 230 FEVMDKLNEIYPEREFVISRFENVFEKLEKQRDNLPTLKGEFIDGKYM-RVH---RSIFSTRMDIKIANARIENKIVNVL 305 (875)
T ss_pred HHHHHHHHhhCCCCcEEECCHHHHHHHHHhhcCCCCeeeeecCCCccc-ccc---CCccccHHHHHHHHHHHHHHHHHHh
Confidence 7778888864 568999999999999999887889999999974 32 223 4999999999999999999998 49
Q ss_pred HHHHhhhc---cccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 002162 329 RQLEFFKG---RNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNP 405 (958)
Q Consensus 329 E~l~~la~---~~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~~~~~~~~~~ 405 (958)
|+|+++|. ..|+...++++|+.|+++||||+||||++++|++|+..||.++.+.++.+++.+++.|+....
T Consensus 306 E~l~~la~~~g~~yp~~~l~~~Wk~ll~nq~HD~i~G~sid~V~~d~~~r~~~~~~~~~~l~~~~l~~l~~~i~------ 379 (875)
T PRK09819 306 EPLASIAYSLGFEYPHGLLEKIWKEMFKNHAHDSIGCCCSDTVHRDIVARYKLAEDLADNLLDFYMRKIADNMP------ 379 (875)
T ss_pred chHHHHHHHcCCCCCHHHHHHHHHHHHHhcCCCcccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 99999874 356777899999999999999999999999999999999999999999999999999875320
Q ss_pred CccccccCCcccccCCCCccccCCCCceEEEEEcCCCceEeEEEEEEE--eCCcEEEEcCCCCEEEEEEeeccccccccc
Q 002162 406 ITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPV--INENVTVKDSKGKVIESQLLPLLKDSMSLR 483 (958)
Q Consensus 406 ~~~~~~~~~ln~s~c~~~~~~~~~~~~~~v~v~Npl~~~r~~~V~i~v--~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~ 483 (958)
.++...++||||++|+|+++|++++ +...+.+.|.+|++|++|+...........
T Consensus 380 -----------------------~~~~~~~~vfN~l~~~r~~~v~i~~~~~~~~~~~~d~~g~~v~~~v~~~~~~~~~~~ 436 (875)
T PRK09819 380 -----------------------QSDADKLTVFNLLPYEREEVINTTVYLPASQFTLRDDRGNPLPYTIREKRDIDPGLL 436 (875)
T ss_pred -----------------------cCCCCEEEEEcCCCccceeEEEEEEEeccCCEEEECCCCCEeeEEEeeccccccchh
Confidence 1234589999999999999999876 456889999999999999986543211110
Q ss_pred ccccccccCCCCCCCCcEEEEEEE-eeCCCceEEEEEEeCCccCCccccceeeeccccCCCceEEccCeEEEEEECCCCc
Q 002162 484 NSYSTAYLGKSTNVTPSYWLAFSA-SVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAK 562 (958)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~l~f~~-~vP~lG~~~~~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~ 562 (958)
..... ..+. ......+.+.|.+ +||||||++|.+...+...... ........|||++|+|+|+ ++|.
T Consensus 437 ~~~~~-~~~~-~~~~~~~~i~f~~~~vP~lG~~~~~i~~~~~~~~~~---------~~~~~~~~ieN~~~~v~i~-~~G~ 504 (875)
T PRK09819 437 DRQIV-HYGN-YDPFMEFDIQINVQILPAMGYRTLYIELNEEGNVIE---------PKSSAEGIIENEFYQITLN-ENGT 504 (875)
T ss_pred hccee-ccCC-CCceEEEEEEEEECCCCCcccEEEEEEeCCcccccc---------ccccccceEecCcEEEEEe-cCCc
Confidence 00000 0000 0001246788874 8999999999987643321100 1223467899999999999 6899
Q ss_pred EEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-ccCCCC-CceEEEEeCCceEEEEEEEc-------
Q 002162 563 LMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEG-QLSFTILRGPLLDEVHQRIN------- 633 (958)
Q Consensus 563 i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~~-~~~~~~-~~~i~v~~Gpl~~~v~~~~~------- 633 (958)
| +|+||.+|+++. ++..|.+. ++.+|||+|.|.... .+.... ...+.+++||+++++++++.
T Consensus 505 l-~l~dk~~gr~~~---~~~~~~d~-----~d~gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~ 575 (875)
T PRK09819 505 L-TIVDKKSGKTYD---RQLIIEEN-----GDDGDEYDYSPPREDWVITSAEAVPSVEISHSAWQSRAVIRYRLAVPKNL 575 (875)
T ss_pred E-EEEECCCCcEEe---ceEEEEec-----CcCCCCcccCCCCCCCEEeccCCcceEEEEEcCCeEEEEEEEEEeCCcCh
Confidence 9 699999999874 55566543 778999999986543 222222 35677888999888877642
Q ss_pred -----------CeEEEEEEEecCCCceeEEEEEccccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceeccccc--cc
Q 002162 634 -----------PWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDY--RK 700 (958)
Q Consensus 634 -----------s~i~q~irL~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~--~~ 700 (958)
+.++|+++|++++++|+|++.|++. +.+|.|++.|+++|.++.++ .| .+|+.++|+++. .+
T Consensus 576 ~~r~~~~~~~~~~i~~~i~L~~~s~~i~~~~~vdw~----~~~~~Lrv~fp~~i~~~~~~-~d-~~fG~i~Rp~~~~~~~ 649 (875)
T PRK09819 576 EERAAGQKTGRMPVKLVVTLSKNSRRIDFDVNLDNQ----ADDHRLRVLFPTEIASKFSL-AD-QQFGSITRPVNDPAMD 649 (875)
T ss_pred hhHhhccccceEEEEEEEEEecCCCEEEEEEEEecc----ccceEEEEEccCCCCCCceE-cC-CCceEEECCCcCcccc
Confidence 4688999999999999999999653 67899999999999997654 45 789999999865 46
Q ss_pred CcccccCCccccceeeccceeeeeeCceeEEEEecCCccccccCC--CeEEEEEEeeccCC---C-----CcCccccccc
Q 002162 701 DWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIAD--GQLELMLHRRLVAD---D-----NRGVSEALNE 770 (958)
Q Consensus 701 ~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~sS~~~--G~iElml~Rr~~~d---D-----~rGv~e~l~e 770 (958)
+|+.+..+..+.+.|||++||+|+|.+.|++|+||+++|+....+ +.|.|+|.|+..+- | +|.-|..+-+
T Consensus 650 ~W~~~~~~e~p~~~~~~~~~v~ls~~~~Gvall~dg~~ey~v~g~~~~~i~LTLlRs~g~lgk~~l~~rpgr~sG~~~pt 729 (875)
T PRK09819 650 VWEQEGWQEAPISIEPMQSFVALHDERHGVAVFTEGVREYEIIGENYDTIALTLFRGVGLLGKEDLLYRPGRPSGIKIPT 729 (875)
T ss_pred ccccccceeCCCCChhhhceEEEecCCceEEEECCCcceEEEecCCCCeEEEEeecccCccCCCccccCCCcccCCccCC
Confidence 898876654555689999999999999999999999999964432 48999999998431 1 1211211111
Q ss_pred cccccccccCeEEEeEEEEee--cCccchhhhccccchhhccCceeeeeccC----CCccccccccccccCcccccCCCc
Q 002162 771 TVCVFDKCEGLTIIGKYYLRI--DPVGEAAKWRRSFGQEIYSPFLLAFTEQD----GDHWANSHLATYSAMDTTYVLPDN 844 (958)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~r~~~~~l~~p~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~lp~~ 844 (958)
.. .+|.|. .+-+|.|.. +....+. ..+.+++++.|+.++-...- ..........+++.+. ..+++
T Consensus 730 P~---aq~~G~-h~f~y~l~ph~g~~~~~~--~~~~a~~~n~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---~~~~~ 800 (875)
T PRK09819 730 PD---SQLLGE-LSFRFSLTSYEGTFDEAG--VAQQAKEYLTPVQCYNKIPFLNMRLNDEEFTLPESYSLLK---MPPDG 800 (875)
T ss_pred Ch---HHhcCc-eEEEEEEEEccCCcchHH--HHHHHHHhccCcceeecccccccccCcccCCCCcccccee---eCCCC
Confidence 10 123342 233444443 2222222 23568899999986521100 0000000011233221 12468
Q ss_pred ceEEEeeecCCC-cEEEEEeeccccccCCCCceeeeeeccccCCCCccceEEeccccccchhhhhhccceeeeecCCCCC
Q 002162 845 VALITLQELDSG-KILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKE 923 (958)
Q Consensus 845 i~l~tl~~~~~~-~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~~~~~~~i~E~sLt~~~~~~~~~~~r~~w~~~~~~~~ 923 (958)
|.+-++|+.+++ .++||+.+....... .+.+.+ +..+..+.|++|.+... .+.
T Consensus 801 i~~sa~K~aed~~~~ilRlyn~~~~~~~-----~~~l~~-----~~~~~~~~~~~l~E~~~-~~~--------------- 854 (875)
T PRK09819 801 AVLSAVKKAEDRDGLILRFFNPAESKTC-----DATVAF-----SKEVKSLDETMLDEKIT-TEE--------------- 854 (875)
T ss_pred EEEEEEEEeccCCCEEEEEeCCCCCccc-----ccccee-----ccchhheeecccccccc-ccc---------------
Confidence 999999999865 599995542111110 111211 23566678888887521 111
Q ss_pred CCcccCCCCCCCCCceEEecCcceeEEEEE
Q 002162 924 QPTAVRGSPVDPAKLVVELAPMEIRTFVIE 953 (958)
Q Consensus 924 ~~~~~~~~~~~~~~~~i~l~P~eIrTf~i~ 953 (958)
.+.++. .++|+|.||+|++|.
T Consensus 855 --------~~~~~~-~~~~~p~eI~T~~i~ 875 (875)
T PRK09819 855 --------NQGSNL-SGELKPCQVQTFLVK 875 (875)
T ss_pred --------cccccc-cccccCCeeEEEEeC
Confidence 011111 267999999999974
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-83 Score=693.03 Aligned_cols=734 Identities=16% Similarity=0.214 Sum_probs=558.6
Q ss_pred cchhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHH
Q 002162 14 QVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQT 93 (958)
Q Consensus 14 ~~~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql 93 (958)
.++++.+...+.+..|+++|+++|+.++...| +|.++.+|+.++++++.+..||+-.|||.||++|.++|+|||+|||+
T Consensus 302 TrRKivRSW~tq~~lMdR~PEy~FvcSQAqQ~-~WlkedhP~~f~kl~e~~~q~qF~pvGGtWVE~DtNiPsGEslvRQF 380 (1078)
T KOG4342|consen 302 TRRKIVRSWVTQLQLMDRNPEYIFVCSQAQQL-EWLKEDHPGLFSKLQEFACQGQFVPVGGTWVEMDTNIPSGESLVRQF 380 (1078)
T ss_pred HHHHHHHHHHHHHhHHhhCcceeEehhhHHHH-HHHhhhChhHHHHHHHHHhcCceeeccceEEecCCCCCChHHHHHHH
Confidence 34677788889999999999999999866666 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeE
Q 002162 94 TLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMT 173 (958)
Q Consensus 94 ~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~t 173 (958)
+.|++|+.++||...+.-|+||+||+|+|||||+ +.+||+.|++++++|+..+.+|... |.|.|.| ||+|++
T Consensus 381 l~GQ~FFlkeFG~~c~~FWLPDTFGYSsQ~PQic-rlcGidrFLTQKLSWNniNSFPhsT---FnW~glD----GSqvl~ 452 (1078)
T KOG4342|consen 381 LQGQNFFLKEFGKMCSEFWLPDTFGYSSQLPQIC-RLCGIDRFLTQKLSWNNINSFPHST---FNWEGLD----GSQVLV 452 (1078)
T ss_pred HhhhhHHHHHhhhhhcceeccccccccchhhHHH-HhhcHHHHHHhhccccccCcCCccc---eeeeecc----CceEEE
Confidence 9999999999999999999999999999999999 9999999999999999999999887 9999999 999999
Q ss_pred EeCCC-CCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchh--HHHH
Q 002162 174 GISPK-NYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAH--TWFR 250 (958)
Q Consensus 174 h~~~~-~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~--~~~~ 250 (958)
|+.|. .|... -+ +.+.+..+.+..+.-+.++-|+.+| +++++ ..-+
T Consensus 453 HmPPgntYtad-----------------------~~----v~dVL~tv~qnk~~~~~~~gl~lfG----~GDGGGGPT~e 501 (1078)
T KOG4342|consen 453 HMPPGNTYTAD-----------------------GS----VEDVLKTVAQNKDKGRANHGLFLFG----FGDGGGGPTQE 501 (1078)
T ss_pred ecCCCCccccc-----------------------Cc----HHHHHHHHHhcCCccccCcceEEEE----ecCCCCCCcHH
Confidence 99775 56543 22 2345555555556667778888888 55553 3456
Q ss_pred HHHHHHH---HHhcCC-CeEEEEc-ChhhHHHHHHhc---CCCCCcccC-CCccCCcCCCCceeeeeccchhhhHHHHHH
Q 002162 251 QMDKFIH---YVNQDG-RVNALYS-TPSMYIDAKYAA---NESWPLKTD-DFFPYADRENAYWTGYFTSRPALKGYVRTM 321 (958)
Q Consensus 251 ~~~~li~---~iN~~~-~~~i~~s-T~~~Yf~a~~~~---~~~~p~~~g-Df~py~~~~~~yWtG~yTSr~~~K~~~R~~ 321 (958)
+++||.+ .-|.++ .|+++.+ |+++||+++.++ +..+|+|.| .||++|+ |+|||++.+|+++|++
T Consensus 502 ML~klrR~r~~~Nt~G~lP~vqlg~tvdeffd~ilkrtnqg~~LptW~GELyfEfHr-------GTYTtqAq~KKlmR~~ 574 (1078)
T KOG4342|consen 502 MLDKLRRIRSLSNTDGVLPRVQLGITVDEFFDAILKRTNQGHDLPTWVGELYFEFHR-------GTYTTQAQIKKLMREC 574 (1078)
T ss_pred HHHHHHHhhcccccCCcccceeecCCHHHHHHHHHhhhccCCcccccchheEEEEec-------CceeeHHHHHHHHHHH
Confidence 6676655 344555 7899999 999999999875 456999966 5789999 9999999999999999
Q ss_pred HHHHHHHHHHHhhhcc-----ccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002162 322 SAYYLAARQLEFFKGR-----NEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTE 396 (958)
Q Consensus 322 e~~L~~aE~l~~la~~-----~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~ 396 (958)
|..|+.+|.++++|.. .||...++.||+.++++||||.+||++++.|+++.+-.+.+....++.++..+++.|..
T Consensus 575 Ei~LHD~E~~sslas~~s~dy~YP~~qlq~LWr~~LLcQFHDVlpGSCIeMVykeA~p~~~~v~k~~~tLl~~a~~~L~a 654 (1078)
T KOG4342|consen 575 EIILHDVELLSSLASARSADYLYPAAQLQHLWRLLLLCQFHDVLPGSCIEMVYKEAMPHYEDVRKHGNTLLSAAAAALCA 654 (1078)
T ss_pred HHHhhhHHHHHHHHHhhcccccCcHHHHHHHHHHHHHHHhcccCCcHHHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHhc
Confidence 9999999999998753 35667899999999999999999999999999999999999999999999999988853
Q ss_pred ccCCCCCCCCccccccCCcccccCCCCccccCCCCceEEEEEcCCCceEeEEEEEEEeCCcEEEEcCCCCEEEEEEeecc
Q 002162 397 FSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLL 476 (958)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~ln~s~c~~~~~~~~~~~~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~ 476 (958)
.. .+...+++.|+|+|+|.+++.++-+....
T Consensus 655 s~-------------------------------s~ke~L~~~nTLpW~~~~v~~~~kp~k~~------------------ 685 (1078)
T KOG4342|consen 655 SE-------------------------------SGKEGLLIVNTLPWKRIEVMALPKPGKAH------------------ 685 (1078)
T ss_pred CC-------------------------------CCccceEEEeccccceeeeecccCCCCce------------------
Confidence 21 12336889999999999988766442211
Q ss_pred cccccccccccccccCCCCCCCCcEEEEEEEeeCCCceEEEEEEeCCccCCccccceeeeccccCCCceEEccCeEEEEE
Q 002162 477 KDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLY 556 (958)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~ 556 (958)
..-.+++|.+|++... ... +++... ...+.++|.|+.+||.+
T Consensus 686 --------------------------~~e~c~~~g~~ta~vt-------~~~---~p~~~y--q~Dd~~~L~Ng~lrV~i 727 (1078)
T KOG4342|consen 686 --------------------------SLELCTVPGMGTAPVT-------PPT---SPVFVY--QTDDSVTLDNGILRVKI 727 (1078)
T ss_pred --------------------------eEEEeccCCccccCCC-------CCC---CceeEE--ecCCeEEEECCEEEEEE
Confidence 0112467777655321 000 122111 24677999999999999
Q ss_pred ECCCCcEEEEEecccceeeE--------E-EEEEEEeecCCCCCCCCCCcceEEccCCCCccCC-CCCceEEE-EeCCce
Q 002162 557 SGKRAKLMRYINSKTSVNKL--------L-EQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEP-EGQLSFTI-LRGPLL 625 (958)
Q Consensus 557 ~~~~G~i~si~dk~~g~~~~--------~-~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~~~~~~-~~~~~i~v-~~Gpl~ 625 (958)
+ .+|.|+||+|...|++.. + .++|..|.+. +-.+.||+-.-..-+.+++ .....+.| .+|+++
T Consensus 728 ~-p~G~itSl~d~~~grE~ld~~~Grn~~GaNQfVlfdD~-----PL~WqAWDte~ysle~y~vl~k~k~v~v~~~g~lr 801 (1078)
T KOG4342|consen 728 D-PTGRITSLVDVASGREALDTAEGRNAVGANQFVLFDDV-----PLYWQAWDTEDYSLERYPVLGKAKTVAVGTEGGLR 801 (1078)
T ss_pred C-CCCceeeeeehhcccchhcccccccccCcccEEEecCC-----ccchhhhhhhhhceecceecCCCceEEeecCCCcc
Confidence 9 589999999998888865 1 1577777643 6677888532111112333 33345777 899999
Q ss_pred EEEEEEE----cCeEEEEEEEecCC-----CceeEEEEEccccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceeccc
Q 002162 626 DEVHQRI----NPWIYQVTRVYKGK-----DHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIR 696 (958)
Q Consensus 626 ~~v~~~~----~s~i~q~irL~~~~-----~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~ 696 (958)
..+.+.+ ++.+.++|.|..+. +.|.|.++|+ |+ +.+|-+.|.|+.+|.|..+.|. .+|++.||++
T Consensus 802 ~sv~v~~qISe~s~~k~~isL~~~~~~ak~~~V~f~teV~---Wh-e~~KFLKVEFPv~irs~fAsYE--tQFGitkRPT 875 (1078)
T KOG4342|consen 802 GSVWVLLQISENSRLKQEISLDVGCTDAKLPYVRFHTEVH---WH-EAHKFLKVEFPVRIRSSFASYE--TQFGITKRPT 875 (1078)
T ss_pred eEEEEEEEcCcccccceEEEEecccccccCCceeeEEEEe---eh-hcCceEEeeccccccccchhhh--hhcccccCCc
Confidence 8877665 57899999997765 7899999984 75 6799999999999999888886 5677999999
Q ss_pred ccccCcccccCCccccceeeccceeeeeeCceeEEEEecCCccccccCCCeEEEEEEeeccCCCCcCccccccccccccc
Q 002162 697 DYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFD 776 (958)
Q Consensus 697 ~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~~~dD~rGv~e~l~e~~~~~~ 776 (958)
||+++|+.+.+|.+.+. +++.+|-..|++|||||+||. |.+++-|.|.|+|++..+|.-. |.+
T Consensus 876 HYNTSWDvAkFEVchhk------faDySe~~~Gvs~LNDCKYGf-SthGnlmrLSLLRsPKaPDAhA------DmG---- 938 (1078)
T KOG4342|consen 876 HYNTSWDVAKFEVCHHK------FADYSEHGFGVSLLNDCKYGF-STHGNLMRLSLLRSPKAPDAHA------DMG---- 938 (1078)
T ss_pred cccccchhhHhHHHHhh------hhhhhhcccceeeeccccccc-ccccceeeehhhcCCCCCCccc------ccC----
Confidence 99999999888877655 699999999999999999999 6999999999999999999754 321
Q ss_pred cccCeEEEeEEEEeecCccchh-hhccccchhhccCceeeeeccCCCccccccccccccCcccccCCCcceEEEeeecCC
Q 002162 777 KCEGLTIIGKYYLRIDPVGEAA-KWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDS 855 (958)
Q Consensus 777 ~~~~~~~~~~~~l~~~~~~~~~-~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~i~l~tl~~~~~ 855 (958)
++.+...+-+...+. +-.-+.+.++++|.-+.....+..+ ...|..+. .+-.+||.|-++|..++
T Consensus 939 -------~Hei~YA~yPH~g~lds~tv~aAh~fN~~fkl~lpa~~~an-----~d~~dafs--vsgdpnViLs~iK~aE~ 1004 (1078)
T KOG4342|consen 939 -------RHEITYALYPHKGSLDSGTVQAAHSFNFPFKLALPAPSPAN-----ADSWDAFS--VSGDPNVILSTIKQAES 1004 (1078)
T ss_pred -------cceEEEEeccCCCCCchhHHHHHHhcCCceeeccCCCCCCC-----Ccccccee--ecCCchHHHHHhhhhcc
Confidence 222333333332111 1112467888998855544332211 12233322 23458999999998875
Q ss_pred C----cEEEEEeecccc-ccCCCCceeeeeeccccCCCCccceEEeccccccchhhhhhccceeeeecCCCCCCCcccCC
Q 002162 856 G----KILLRLAHLYEI-EEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRG 930 (958)
Q Consensus 856 ~----~~llRl~~~~~~-~~~~~~s~~~~v~l~~lf~~~~~~~i~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~ 930 (958)
+ .|+|| .||. |... .+.+.+ .+.+.++..+++.....-...... .
T Consensus 1005 ~~~~~SivlR---vYEslGg~s----~a~L~~-----sL~v~~~~kcd~LE~d~~~~lT~~------------------~ 1054 (1078)
T KOG4342|consen 1005 SPQRRSIVLR---VYESLGGHS----DAWLHL-----SLPVQEAIKCDLLERDPAGHLTSG------------------Q 1054 (1078)
T ss_pred CcccceEEEE---ehhhcCCcc----eEEEEE-----eeehhHhhhccchhcChHhhCcCC------------------C
Confidence 4 69999 7776 2221 233333 456667777777765322222110 0
Q ss_pred CCCCCCCceEEecCcceeEEEEEE
Q 002162 931 SPVDPAKLVVELAPMEIRTFVIEF 954 (958)
Q Consensus 931 ~~~~~~~~~i~l~P~eIrTf~i~~ 954 (958)
.+..-..+-|+|+|+||.||.+++
T Consensus 1055 ~~~a~~~~pi~lrpfeiAsf~~~l 1078 (1078)
T KOG4342|consen 1055 PPEAHLFSPISLRPFEIASFSATL 1078 (1078)
T ss_pred CchhhhcCCcccceeeeeeeeecC
Confidence 110001134789999999999864
No 6
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-51 Score=497.69 Aligned_cols=690 Identities=19% Similarity=0.196 Sum_probs=484.9
Q ss_pred chhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHH
Q 002162 15 VACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTT 94 (958)
Q Consensus 15 ~~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~ 94 (958)
..+..+.+.+++..|+..|.++|+.+ +..++.|..+..|+..++ ++|+.|+|+++||+||.+|.++++||+++||+.
T Consensus 220 ~r~a~ts~~~~~~l~D~~p~~~~~~s-~~~~y~~l~~d~p~l~~~--~~v~~~~~~~~~g~~ve~d~n~~sGEslsrq~~ 296 (943)
T COG0383 220 ERKASTSFSLVMNLMDHYPVQKFVQS-AAALYNWLKPDVPFLFSR--PAVEFEQWEIVGGMWVEEDLNTPSGESLSRQFL 296 (943)
T ss_pred HHHHhhhhhheecccccChhhhhhhh-HHHHHHHhcCccHHHhhc--ccccccceEEeecccccccCCccccchhhhhhh
Confidence 45677888899999999999999987 555668999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEE
Q 002162 95 LGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTG 174 (958)
Q Consensus 95 ~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th 174 (958)
+|++|+.++||...|+.|.||+||.|+++|||+ ..+|+++|+++++.|++.+.++++. |.|++.| |+++++|
T Consensus 297 ~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil-~p~gi~~f~t~klawn~tn~~Ph~~---~~w~~~d----g~e~~~h 368 (943)
T COG0383 297 YGQRFFTEKFGASSRIYWKPDSFGFSGQLPQIL-EPLGIDVFVTTKLAWNDTNRFPHDL---LRWRWKD----GTENLAH 368 (943)
T ss_pred ccceeeecccCccceeEeehhccccchhHHHHH-HhhcchhhhccccchhhccCCChhH---heeeccc----cccccee
Confidence 999999999999999999999999999999999 9999999999999999999999976 9999999 9999999
Q ss_pred eCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhH--HHHHH
Q 002162 175 ISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHT--WFRQM 252 (958)
Q Consensus 175 ~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~--~~~~~ 252 (958)
..+.+++.. . + .....++.. -.....|+.+| +++++. .-..+
T Consensus 369 ds~~~~~~d-------~---------------------v-~~~~~~r~~---~~~~~~~~~~g----~gd~ggg~~~dm~ 412 (943)
T COG0383 369 DSICGCSSD-------P---------------------V-HREMEYRFE---KINQVGLYLYG----YGDGGGGPSIDML 412 (943)
T ss_pred ecCCCCccc-------H---------------------H-HHHHHhhhh---hhccceeEEee----ccCCCCCCCHHHH
Confidence 976544321 0 0 111111111 13445677777 443321 11222
Q ss_pred HHHHHHHhcCCCeEEEEcChhhHHHHHH----hcCCCCCcccC-CCccCCcCCCCceeeeeccchhhhHHHHHHHHHHHH
Q 002162 253 DKFIHYVNQDGRVNALYSTPSMYIDAKY----AANESWPLKTD-DFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLA 327 (958)
Q Consensus 253 ~~li~~iN~~~~~~i~~sT~~~Yf~a~~----~~~~~~p~~~g-Df~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ 327 (958)
++.- ...+..+|.... ......|++.| +|+++|+ |+|||....|+++|.+|..|+.
T Consensus 413 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ely~E~hr-------g~~t~~~~~k~~~r~~e~~l~d 473 (943)
T COG0383 413 ENPE------------LPIAEGVFNTGVEKKTSTLELVPTWDGELYLELHR-------GTYTTQAKTKKLNRESEFLLED 473 (943)
T ss_pred hccc------------cccccceeeecceeeeeecccccccchhhhhhccC-------ceeehhhhhhhhccccccceec
Confidence 2110 122222332221 22345788854 7899999 9999999999999999999999
Q ss_pred HHHHHhhhc------cccCCCchHHHHHHHHhhhccccccCccchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 002162 328 ARQLEFFKG------RNEVGLSTDSLADALALVQHHDAVSGTEKQHVAD-DYAKRLSIGYTEAEKVVAASLACLTEFSKN 400 (958)
Q Consensus 328 aE~l~~la~------~~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~-Dy~~rl~~~~~~~~~~~~~~l~~L~~~~~~ 400 (958)
+|.+.+++. ..++...++++|+.++++|+||+++||+...|+. |....+......+..++..+++.|.+.
T Consensus 474 ~e~~~~~~~~~~~~~~~~~~~~~~~~w~~~l~~qfhdvlpgs~i~~vy~~~a~~~~~~~~~~~~~i~~~~~~~l~~~--- 550 (943)
T COG0383 474 AEGISVEAAIIEGDRVTYPYELLNELWKGLLLAQFHDVLPGSSIKEVYSYDALPLLEVVQKGASKIAELALKVLSSQ--- 550 (943)
T ss_pred ccccchhhhhhccccccCchhhHHHHHHHhhhhhceeeccccceeeechhhHHHHHHhhhccchhhhhhhhhhhhhc---
Confidence 999888742 2456778899999999999999999999999999 988888888888888888888776331
Q ss_pred CCCCCCccccccCCcccccCCCCccccCCCCceEEEEEcCCCceEeEEEEEEEeCCcEEEEcCCCCEEEEEEeecccccc
Q 002162 401 GCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSM 480 (958)
Q Consensus 401 ~~~~~~~~~~~~~~ln~s~c~~~~~~~~~~~~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~ 480 (958)
....+.++|++.|.+. .+.|.|..++.++.+.+.
T Consensus 551 ------------------------------~~e~~~~~~~~~~~~~----------~~~v~d~~~~~~~~~~~~------ 584 (943)
T COG0383 551 ------------------------------CLENLFVKNTLSWNGI----------SLQVLDKTSGGIYTSQLT------ 584 (943)
T ss_pred ------------------------------cccceEEEeeccCCcc----------eEEEEEcCCCceehhhhh------
Confidence 1125789999999981 455666555444433221
Q ss_pred cccccccccccCCCCCCCCcEEEEEEEeeCCCceEEEEEEeCCccCCccccceeeeccccCCCceEEccCeEEEEEECCC
Q 002162 481 SLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKR 560 (958)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~ 560 (958)
...++|++|...+.++...... .....+++..+..++ ++
T Consensus 585 ------------------------~~ed~~~~g~~~i~~~~~~~~~----------------~~~~~~~~~~~~~~~-~~ 623 (943)
T COG0383 585 ------------------------ALEDVGDIGNEYIYSQPTKTEP----------------ETVIEEKEWKRLIIN-DT 623 (943)
T ss_pred ------------------------hhhhcCCcccceeEeccccccc----------------cccccccchheeecc-CC
Confidence 1236888888888773322110 122334444455554 56
Q ss_pred C-cEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-ccCCCCCceEEEEeCCceEEEEEEE---cCe
Q 002162 561 A-KLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPEGQLSFTILRGPLLDEVHQRI---NPW 635 (958)
Q Consensus 561 G-~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~~-~~~~~~~~~i~v~~Gpl~~~v~~~~---~s~ 635 (958)
| .+. .|... +..++||.-.+.... ...+.....-.+++|||..++++.. .+.
T Consensus 624 gn~~~------------------~~~~~-----~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (943)
T COG0383 624 GNQLA------------------LIEDE-----PAYWDAWNIDKFLEEELLALTALPEEAIENGPLVRTVRVSKELTEST 680 (943)
T ss_pred Cccee------------------eeecc-----cceechhcchhhhhhhhhhhhccccchhccccceeeeeeeeeccceE
Confidence 6 222 22211 334556665544332 1222222222358999999988765 467
Q ss_pred EEEEEEEecCCCceeEEEEEccccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCcccccCCcccccee
Q 002162 636 IYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYY 715 (958)
Q Consensus 636 i~q~irL~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyY 715 (958)
++|.|++++++++|+|++.|++ + ..+|.++|.|+++++++.+ ..| -.|+.++|+++.+++|+.+ .+--
T Consensus 681 i~~~i~l~~~s~~l~~~t~vd~---q-~~~~~lrv~fp~~~~s~~a-~~d-~~fg~v~Rp~~~~~~W~~a------~~e~ 748 (943)
T COG0383 681 ITQKVTLYKGSPRLDFKTEVDN---Q-VRDHRLRVLFPTDIASDFA-TAD-IPFGVVERPTHPNTSWENA------RFEV 748 (943)
T ss_pred EEEEEEEecCCceeEEEEEEEc---c-ccceEEEEEecccccccce-ecc-ccceeeccCCCCchhhhcc------cCcc
Confidence 8999999999999999999974 3 5789999999999999754 445 7899999999999999865 4445
Q ss_pred eccceeeeeeCcee--EEEEecCCccccccCCCeEEEEEEeec-------cCCCCcCccccccccccccccccCeEEEeE
Q 002162 716 PVNLGIYMKDNSSE--LSILVDRSVGGSSIADGQLELMLHRRL-------VADDNRGVSEALNETVCVFDKCEGLTIIGK 786 (958)
Q Consensus 716 P~~s~~~I~D~~~~--ltvl~dr~~G~sS~~~G~iElml~Rr~-------~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~ 786 (958)
|+..++.+.|...| +++++||+||++ .+++.|.|+|.|.. .+||.-+ + |.|. ++.+
T Consensus 749 p~~~~vdls~~~~g~~vs~ln~~kYg~~-~~~~~l~lTLLrs~~~~gd~~~~P~p~A--------d-----~~g~-h~~~ 813 (943)
T COG0383 749 PLQKFVDLSDGEYGVTVSLLGDCKYGIS-THGNLLALTLLRSVGELGDWGYRPDPEA--------D-----CLGE-HEFT 813 (943)
T ss_pred hhhccccccCCccceeEeccCCcceeEe-ccCCEEEEEecccccccccccccCCchh--------h-----hccc-eeEE
Confidence 68889999999999 888999999995 69999999999999 7777643 1 2221 2334
Q ss_pred EEEeecC--ccchhhhccccchhhccCceeeeeccCCCccccccccccccCc-ccccCCCcceEEEeeecCCC-cEEEEE
Q 002162 787 YYLRIDP--VGEAAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMD-TTYVLPDNVALITLQELDSG-KILLRL 862 (958)
Q Consensus 787 ~~l~~~~--~~~~~~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~lp~~i~l~tl~~~~~~-~~llRl 862 (958)
|.+.+.. ..... ....++.++.|........+.. .......++... ....-|+++.|.++|+.+|+ .++||+
T Consensus 814 y~ly~h~~~~~~~~--~~~~a~~~~~P~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lsA~K~aed~~~~IlR~ 889 (943)
T COG0383 814 YALYPHQGSFLSAP--TAVRAYELNVPVRTVQVEEDGV--EGTLEATLDLLEPLLLVGPDNLILSALKRAEDGDGLILRL 889 (943)
T ss_pred EEEEEccccccccc--hhhhhhhccCceEEeecccccc--cccchhccccccccccCCCcceEEEeeeecccCCceEEEE
Confidence 4433322 22121 1234555667766655332110 000011121100 00135899999999999886 799997
Q ss_pred eeccccccCCCCceeeeeeccccCCCCccce-EEeccccccchhhhhhccceeeeecCCCCCCCcccCCCCCCCCCceEE
Q 002162 863 AHLYEIEEDTDLSVMSSVELKKVFPKKKISK-VTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVE 941 (958)
Q Consensus 863 ~~~~~~~~~~~~s~~~~v~l~~lf~~~~~~~-i~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~ 941 (958)
.+...... . .-+.+ .+.+.. +.||.|..+ +. .. ..+ ..|+
T Consensus 890 yn~~~~~~-~---~~~~~-------~l~~~~~~~~~~llE~-~~-~~-------------------------~~~-~~i~ 930 (943)
T COG0383 890 YNPSGTKT-L---ALIEL-------SLPVVNAIRETNLLEN-EN-EL-------------------------ETN-SPIT 930 (943)
T ss_pred eccCCCCc-c---eeeec-------cchhhhhhhhhhhhcc-cc-cc-------------------------ccC-Cccc
Confidence 76543322 1 01111 234444 778888766 00 00 000 1577
Q ss_pred ecCcceeEEEEE
Q 002162 942 LAPMEIRTFVIE 953 (958)
Q Consensus 942 l~P~eIrTf~i~ 953 (958)
.+|.||.||++.
T Consensus 931 ~~~~ei~t~k~~ 942 (943)
T COG0383 931 PKPVEIVTLKLE 942 (943)
T ss_pred ccceEEEEEEee
Confidence 889999999986
No 7
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=5.6e-51 Score=445.17 Aligned_cols=249 Identities=28% Similarity=0.485 Sum_probs=200.4
Q ss_pred chhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHH
Q 002162 15 VACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTT 94 (958)
Q Consensus 15 ~~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~ 94 (958)
...+.++|+++++.|+++|++||+++|+.++++|| +..|+.++++|+||++||||||||||||+||+++++||+||||+
T Consensus 22 ~~~~~~~~~~~l~~l~~~~~~~f~~~~~~~~~~~~-~~~p~~~~~~~~lv~~Gri~~vgg~~~~~D~~l~~~Eslirql~ 100 (275)
T PF01074_consen 22 RRYLVNILDSVLDLLEEDPDFRFIDGQTAYLEDYL-EDAPEEFKRIKKLVKEGRIEIVGGWYVQPDENLPSGESLIRQLL 100 (275)
T ss_dssp HHHHHHHHHHHHHHHHH-TT--EECTBCHHHHHHH-HCSGHHHHHHHHHHHTTSEEESSSBSS-B-SSSS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcceEeechhHHHHHHH-HhCCHHHHHHHHHHHhceeEEeCceeeeccccCCCHHHHHHHHh
Confidence 56899999999999999999999999999997777 55999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEE
Q 002162 95 LGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTG 174 (958)
Q Consensus 95 ~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th 174 (958)
+|++|++++||+.|++||+||+||||+++|||| +++||++++++|++++.++.++..+.++|+|+|+| ||+||||
T Consensus 101 ~G~~~~~~~fg~~~~~~~~~D~FG~~~~lP~il-~~~Gi~~~v~~r~~~~~~~~~~~~~~~~F~W~g~d----Gs~ilt~ 175 (275)
T PF01074_consen 101 YGHKYLRKEFGVRPKVAWQPDSFGHSAQLPQIL-KQFGIKYFVIWRISWNDKNPFKANPQSEFYWQGPD----GSEILTH 175 (275)
T ss_dssp HHHHHHHHHHTG--SEEEESSSSSB-TCHHHHH-HTTT-SEEEESSS-HHHHHHHHHTTSSEEEEE-TT----STEEEEE
T ss_pred hhHHHHHHhcCCCCCeEEeCCCCCCchhhHHHH-hccCcceEEEeccccccccccccCCCceEEEecCC----CcceeEE
Confidence 999999999999999999999999999999999 99999999999999999998877788999999999 9999999
Q ss_pred eCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhHHHHHHHH
Q 002162 175 ISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDK 254 (958)
Q Consensus 175 ~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~~~~~~~ 254 (958)
+++.+|..|..+..| ++++.+++++++.+..+.++++|+|+|+| ...+..+++
T Consensus 176 ~~~~~y~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~l~~~G~d------~~~~~~~~~ 228 (275)
T PF01074_consen 176 VLPNYYYGPWYGSEF---------------------EDADELLEQLRKLAKKYYTNNILIPYGDD------DDGGPPDEE 228 (275)
T ss_dssp E-TST-TSHHTTCCH---------------------HHHHHHHHHHHHHHCCSSSSEEEEEEEEE------HHHHHHHHH
T ss_pred ecccCCCCCCCCccc---------------------ccHHHHHHHHHHHHHhcCCCceEEEeecC------CCCCCcHHH
Confidence 999877653011000 35678899999999999999999999988 223445556
Q ss_pred HHHHHh---c-CCCeEEEEcChhhHHHHHHhcCCCCCcc-cCCCccCC
Q 002162 255 FIHYVN---Q-DGRVNALYSTPSMYIDAKYAANESWPLK-TDDFFPYA 297 (958)
Q Consensus 255 li~~iN---~-~~~~~i~~sT~~~Yf~a~~~~~~~~p~~-~gDf~py~ 297 (958)
+++++| + ...+++++||+++||++++++ .+||++ +|||+||+
T Consensus 229 ~~~~i~~~~~~~~~~~i~~sT~~~yf~~l~~~-~~~p~~~~~df~~Y~ 275 (275)
T PF01074_consen 229 LIEYINEWNEEYPGPKIKYSTLSEYFEALEKE-SELPVHYHGDFPPYA 275 (275)
T ss_dssp HHHHHHHHHHHGCTEEEEE--HHHHHHHHHHC---B-EE-ES-B-S-E
T ss_pred HHHHHHHhcccCCCeEEEECCHHHHHHHHHhc-cCCCcccCCCCCCCC
Confidence 666665 3 468999999999999999998 999999 99999995
No 8
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=8.2e-45 Score=427.01 Aligned_cols=429 Identities=29% Similarity=0.424 Sum_probs=285.9
Q ss_pred eEEEEEcCCCceEeEEEEEEEeCCcEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEeeCCC
Q 002162 433 LVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPL 512 (958)
Q Consensus 433 ~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~l 512 (958)
+.|+|||||+|+|+++|+|+++.+.+.+.|..|++|++|+++... ....++|+|.++||||
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~~~-------------------~~~~~~l~f~~~vPal 61 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPEPY-------------------STGRYELLFVVDVPAL 61 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEEEE-------------------EEEEEEEEEEEEE-TT
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEeccC-------------------CCCceEEEEEeccCCc
Confidence 479999999999999999999999999999999999999998221 1245789998899999
Q ss_pred ceEEEEEEeCCccCCccccceeeeccccCCCceEEccCeEEEEEECCCCcEEEEEecccceeeE--EEEEEEEeecCCCC
Q 002162 513 GFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKL--LEQSYIYYRGDDGS 590 (958)
Q Consensus 513 G~~~~~i~~~~~~~~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~i~si~dk~~g~~~~--~~~~~~~Y~~~~g~ 590 (958)
||++|.|............ .. ....+...|||++|+|+||+.+|.|.+|+||++|+++. ..+++..|.+..++
T Consensus 62 Gy~~~~i~~~~~~~~~~~~-~~----~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~ 136 (457)
T PF07748_consen 62 GYKTYRIVEGESSEPSNEA-SI----AKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGD 136 (457)
T ss_dssp EEEEEEEEECSS--TTC---CE----EETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSC
T ss_pred eeEEEEeeccccccccccc-ee----ecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccccc
Confidence 9999999987654332100 00 01113578999999999996669999999999999999 88899999765443
Q ss_pred C-----CCCCCcceEEccCCCCccCCCCCceEEEEeCC--ceEEEEEEEcCeEEEEEEEecCCCceeEEEEEccccccCC
Q 002162 591 K-----DLQPSGAYIFRPNGTYPIEPEGQLSFTILRGP--LLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDG 663 (958)
Q Consensus 591 ~-----~~~~sgAY~F~P~~~~~~~~~~~~~i~v~~Gp--l~~~v~~~~~s~i~q~irL~~~~~~ie~e~~v~~i~~~~~ 663 (958)
. ..+.+|+|.|.|+++....+.-...+. ..+. ++.++.....+.++++++||+++++|||++.|+|.+ .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~-~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~~ie~~~~vdn~~---~ 212 (457)
T PF07748_consen 137 YDISPLELQRSGAYLFVEDGPLRSSIRVEYKFE-LPKNLSLVKRSEQTGSSRITQTIRLYKGSPRIEFETEVDNWA---E 212 (457)
T ss_dssp TTE-SCCCGSEECCEEEEESSSEEEEEEEEEEE-EESCBECEEEESCEEEEEEEEEEEEETTESSEEEEEEEEE-T---T
T ss_pred ccccccccccCceEEEEecCCceEEEEEEEEEe-ccCCcEEEEEEEeccceEEEEEEEEecCceEEEEEEEecccc---c
Confidence 0 123578888887665310000000000 1111 223333334568999999999999999999998642 2
Q ss_pred CCc-EEEEEEEeeccCCCeEEEcCCcccceecccccccCcccccCCccccceeeccceeeeeeCceeEEEEecCCccccc
Q 002162 664 IGK-EVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSS 742 (958)
Q Consensus 664 ~~~-el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~sS 742 (958)
.++ +++++|+|+|.++..||+|++|+.+.+|+++. ..++++|||||.+.++|.|.+.+|+|+|||++|+++
T Consensus 213 ~~~~~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~~--------~~~~~~~~~p~~~~~~v~~~~~~l~i~~d~~~g~~~ 284 (457)
T PF07748_consen 213 DHRKELRVRFPTNIDSDEAFYDDQFGFIERKRPTHP--------NTPWEANYYPVPSHAFVDDSDSRLAILNDGKYGYES 284 (457)
T ss_dssp SCEEEEEEEEEES-S-TCEEEEESTTEEEEECESST--------TTTCGGG-EEECSCCEEEECSECEEEEESS-EEEEE
T ss_pred CCceeEEEEeecCCCCCCEEEECCCCeEEecCCccc--------cCCcccccCCCcceEEEEcCCCCEEEEcCCCcceEe
Confidence 234 79999999999999999998886554435443 356779999999999999999889999999999988
Q ss_pred cC-CCeEEEEEEeeccCCCCcCccccccccccccccccCeEEEeEEEEeecCccchhhhccccchhhccCceeeeeccCC
Q 002162 743 IA-DGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQDG 821 (958)
Q Consensus 743 ~~-~G~iElml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~l~~p~~~~~~~~~~ 821 (958)
+. +|+|+|||||++..||++|+++ |.|.+...........+.+.++++|++++.....
T Consensus 285 ~~~~g~l~ltL~R~~~~D~g~~~~~--------------------~~l~~~~~~~~~~~~~~~a~~l~~Pl~~~~~~~~- 343 (457)
T PF07748_consen 285 LDQDGELELTLLRRPSQDDGRGVFR--------------------YALYPHSGSWDEADVVQEAYELNQPLIVFNSSNI- 343 (457)
T ss_dssp CTTTTEEEEEEEEEBSCG-SSSEEC--------------------CEEEEEEEEEEEEECHHCHHHHTS-EEEESS--T-
T ss_pred ccCCCeEEEEEeecccccCCccEEE--------------------EEEEEeccccccccchhhhhhccCccEEeecccc-
Confidence 87 9999999999999999999662 3333322211110112356799999988722111
Q ss_pred CccccccccccccCcc-cccCCCcceEEEe-----eecCCC-----cEEEEEeeccccccCCC--C-cee---eeeeccc
Q 002162 822 DHWANSHLATYSAMDT-TYVLPDNVALITL-----QELDSG-----KILLRLAHLYEIEEDTD--L-SVM---SSVELKK 884 (958)
Q Consensus 822 ~~~~~~~~~~~~~l~~-~~~lp~~i~l~tl-----~~~~~~-----~~llRl~~~~~~~~~~~--~-s~~---~~v~l~~ 884 (958)
.......++++.. ...+|+++|..+| |+.+++ .++||+.+......... + +.+ +.+++.+
T Consensus 344 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~~~~~~~~ilR~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (457)
T PF07748_consen 344 ---QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDGSDWSDGLILRLYNPSGKETEASLDFLSKPLSGAEVNLVN 420 (457)
T ss_dssp ---TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTTSEEETCEEEEEEESSSSTCCCTTCCTSCCTEEEEEEEES
T ss_pred ---ccccccCCCcccccccccccccCCCcccccccccccccccccCCEEEEEEecCCCccccccccCCccceeEEEEecc
Confidence 1111122333221 1136777776665 777666 69999776554433322 1 334 6777788
Q ss_pred cCCCCccceEEeccccccchhhhhhccceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEEE
Q 002162 885 VFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFV 951 (958)
Q Consensus 885 lf~~~~~~~i~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P~eIrTf~ 951 (958)
+|....+..+.||++++.... +...|+|+|||||||+
T Consensus 421 lle~~~~~~i~e~s~~~~~~~------------------------------~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 421 LLEEPDIEEIEETSLSDPSES------------------------------NSVELTLKPFEIKTFR 457 (457)
T ss_dssp TTSSSCEEEEEEE-SEEEESC------------------------------GGTCSEE-TTEEEEEE
T ss_pred cccCCCccceEeeccCCCCCC------------------------------CEeEEEEeCcEEEEEC
Confidence 888888888999995532111 1236889999999996
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.85 E-value=2.9e-22 Score=174.62 Aligned_cols=75 Identities=39% Similarity=0.541 Sum_probs=65.5
Q ss_pred CceeeeeccchhhhHHHHHHHHHHHHHHHHHhhhccc-----cCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHH
Q 002162 302 AYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGRN-----EVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRL 376 (958)
Q Consensus 302 ~yWtG~yTSr~~~K~~~R~~e~~L~~aE~l~~la~~~-----~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl 376 (958)
+||+|||||||.+|+++|++|++|+.||++++++... ++...++++|+.|+++||||+||||++++|++||.+||
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~d~~~rl 80 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLGNGGDYPQEELEKAWKALLLNQFHDAITGTSIDSVYDDYLRRL 80 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH--HSG-HHHHHHHHHHHHHCTTBTTTTTS-S-HHHHHHHHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhccCccccHHHHHHHHHHHHHhccCCCCCCcChHHHHHHHHHhC
Confidence 4899999999999999999999999999999986543 34567899999999999999999999999999999986
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.81 E-value=1.4e-20 Score=163.52 Aligned_cols=74 Identities=38% Similarity=0.498 Sum_probs=67.6
Q ss_pred ceeeeeccchhhhHHHHHHHHHHHHHHHHHhhhc-----cccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHH
Q 002162 303 YWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKG-----RNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRL 376 (958)
Q Consensus 303 yWtG~yTSr~~~K~~~R~~e~~L~~aE~l~~la~-----~~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl 376 (958)
||+||||||+.+|+++|++|++|+.+|.+++++. ..++...++.+|+.|+++||||+||||++++|++||..|+
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~~~~~~~~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d~~~r~ 79 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLLLGYKYPSEQLEELWKALLLNQFHDAITGTSIDEVYDDYETRL 79 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHhcCcccCCccCcHHHHHHHHHhC
Confidence 6899999999999999999999999999999864 2355667899999999999999999999999999999874
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=99.44 E-value=6.5e-15 Score=181.70 Aligned_cols=330 Identities=14% Similarity=0.062 Sum_probs=228.6
Q ss_pred HhhHHHHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHH
Q 002162 18 VQNVLDSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLG 96 (958)
Q Consensus 18 v~~il~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G 96 (958)
+...++.+++.++++| ..-|..+.+...-+.+....|+.+++++.+++.|++ .+|+++.+.|.+.+++|+.+|++++|
T Consensus 29 ~~~~~~~i~~~~~~~~~~~~~~~d~qt~~l~d~l~v~~~~~~~~~~~~~~~~l-~ig~~~~~~~~~~~~~e~~~rn~l~~ 107 (943)
T COG0383 29 LDELFEEIIELLQKDPEFAGFHLDGQTIWLDDYLAVPPELKDRVKLLIASGKL-GIGPWYTQTDTFILSGESNVRNLLIG 107 (943)
T ss_pred chhhhhhhhhccccCcccceecCccceeeeeeeEEecccchhhHHHHHhhcCc-cccCCCCeeEEEEeccccceeeeecc
Confidence 4445999999999999 445777766444345557899999999999999999 58999999999999999999999999
Q ss_pred HHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhH------H---hhcccCceEEEEeeCCCCCC
Q 002162 97 HRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDR------A---KRINEKTLEVVWRASKSLGS 167 (958)
Q Consensus 97 ~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k------~---~~~~~~~~eF~W~g~d~~~~ 167 (958)
..+.. .+|..++.||.+|.||+..+.|+++ ..+|++.+.|+|+..... . ......-.+..|.+++
T Consensus 108 ~~~~~-~~~~~~~~g~~~d~~g~~~qa~~~~-~~~~i~~~~f~r~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~---- 181 (943)
T COG0383 108 EFDAE-RFGKAMKLGYFPDTFGNLGQAPQLY-ENAGISAVAFGRGAALIGFGQLVLFELLEAYGSDFSEITWSEPD---- 181 (943)
T ss_pred hHHHH-HhhhhhccccccccchhhhhhhHHH-HhcCCchhhcccccchhhcccchhhhhhhHhcCcCcccccccCC----
Confidence 99765 6779999999999999999999999 899999999999863110 0 0011222367788888
Q ss_pred CCceeEEeCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhH
Q 002162 168 SAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHT 247 (958)
Q Consensus 168 gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~ 247 (958)
|++++-+.++..|..+ .. ... ....-++-.+..-++..++ ...+..++++.|+|..+.
T Consensus 182 ~~~~l~il~~~~y~~g-~~-----I~~---------~ghahid~aWlw~l~et~r---~a~ts~~~~~~l~D~~p~---- 239 (943)
T COG0383 182 GSQVLGILLANGYSNG-NE-----IPA---------VGHAHIDTAWLWPLDETER---KASTSFSLVMNLMDHYPV---- 239 (943)
T ss_pred chhhHHHHHHHHhhcc-cc-----ccc---------cchhhHHHHHhccHHHHHH---HHhhhhhheecccccChh----
Confidence 7888877788777765 11 100 0001111111112223333 345667889999987554
Q ss_pred HHHHHHHHHHHHhcC-CCeEEEEcC----hhhHHHHHHhc-CCCCCcccCCCcc--CCcCCCCce--eeeeccchhhhHH
Q 002162 248 WFRQMDKFIHYVNQD-GRVNALYST----PSMYIDAKYAA-NESWPLKTDDFFP--YADRENAYW--TGYFTSRPALKGY 317 (958)
Q Consensus 248 ~~~~~~~li~~iN~~-~~~~i~~sT----~~~Yf~a~~~~-~~~~p~~~gDf~p--y~~~~~~yW--tG~yTSr~~~K~~ 317 (958)
+.+....+++.|.- ......|+- ..+|+...... ....++.+|+++. +..+ ..|. -..-+||..+|..
T Consensus 240 -~~~~~s~~~~y~~l~~d~p~l~~~~~v~~~~~~~~~g~~ve~d~n~~sGEslsrq~~~g-q~~~~~~f~~ssri~w~pd 317 (943)
T COG0383 240 -QKFVQSAAALYNWLKPDVPFLFSRPAVEFEQWEIVGGMWVEEDLNTPSGESLSRQFLYG-QRFFTEKFGASSRIYWKPD 317 (943)
T ss_pred -hhhhhhHHHHHHHhcCccHHHhhcccccccceEEeecccccccCCccccchhhhhhhcc-ceeeecccCccceeEeehh
Confidence 35556666666632 223333444 33444333221 1346788888864 1110 1111 1345899999999
Q ss_pred HHHHHHHHH-HHHHHHh-------hhc---cccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHH
Q 002162 318 VRTMSAYYL-AARQLEF-------FKG---RNEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSI 378 (958)
Q Consensus 318 ~R~~e~~L~-~aE~l~~-------la~---~~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~ 378 (958)
+...+..|- .+|++.. ++. ..+|...+.-.|+....++.||++|||+.+.|+.+...|...
T Consensus 318 ~fg~s~~Lpqil~p~gi~~f~t~klawn~tn~~Ph~~~~w~~~dg~e~~~hds~~~~~~d~v~~~~~~r~~~ 389 (943)
T COG0383 318 SFGFSGQLPQILEPLGIDVFVTTKLAWNDTNRFPHDLLRWRWKDGTENLAHDSICGCSSDPVHREMEYRFEK 389 (943)
T ss_pred ccccchhHHHHHHhhcchhhhccccchhhccCCChhHheeecccccccceeecCCCCcccHHHHHHHhhhhh
Confidence 988888774 6777665 432 234556666779999999999999999999999999888765
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=98.27 E-value=2.3e-06 Score=97.26 Aligned_cols=123 Identities=19% Similarity=0.222 Sum_probs=93.6
Q ss_pred HhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHH-----------------------------------------
Q 002162 18 VQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEV----------------------------------------- 56 (958)
Q Consensus 18 v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~----------------------------------------- 56 (958)
+.+.+--++..|++.|+.|++.+=...|-+|+++..+..
T Consensus 28 ~~~~Y~pll~~l~~~~~~k~t~~lSp~LleqL~d~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~f~~~~~~~~l~~~~~ 107 (360)
T PF03065_consen 28 ATECYLPLLRLLERLPDFKLTFSLSPSLLEQLEDYAPQEYDQYLERSLARAELLREEKEFLLRANFTREDFERLLDFFRE 107 (360)
T ss_dssp HHHTHHHHHHHHHHHHH--EEEEE-HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHhCcCccEEEEECHHHHHHHHhhhhhcccccccccccccccccccccccccccccccccccccccccc
Confidence 445555677888888878877764455557777767777
Q ss_pred -----HHHHHHHHhCCCeEEEcceeeecccCCCCH-HHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhh
Q 002162 57 -----QNVVKQLVNSGQLELINGGMCMHDEAAPHY-IDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE 130 (958)
Q Consensus 57 -----~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~-es~Irql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~ 130 (958)
-+.+|+|+++|++|++|++|..+=-.+..- +++..|+..|.+.+++.||++|+..|.|. .+.+..+..++ ++
T Consensus 108 ~~~~ii~~~~~l~~~G~iEll~~~~~h~ilpl~~~~~d~~~Qi~~~~~~~~~~FG~~P~G~W~pE-~a~~~~l~~~l-~~ 185 (360)
T PF03065_consen 108 IIGDIIEAFRELAERGQIELLTSPYYHPILPLLPDPEDFRAQIEMGREYFKKHFGRRPRGFWLPE-CAYSPGLEEIL-AE 185 (360)
T ss_dssp TTT-HHHHHHHHHHTTSEEEEEE-TT-B-GGGSSHHHHHHHHHHHHHHHHHHHHSS--SBEE-GG-G-B-TTHHHHH-HH
T ss_pred hhhhhHHHHHHHHHCCCEEEEeCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCCCceECcc-cccCHHHHHHH-HH
Confidence 899999999999999999999998888888 99999999999999999999999999997 58899999999 89
Q ss_pred cCCcEEEEeecC
Q 002162 131 VGFDFLFFARID 142 (958)
Q Consensus 131 ~G~~~~~~~Ri~ 142 (958)
+||+++++.--.
T Consensus 186 ~Gi~~~i~d~~~ 197 (360)
T PF03065_consen 186 AGIRYTILDGHQ 197 (360)
T ss_dssp TT--EEEEECHH
T ss_pred cCCEEEEECcHH
Confidence 999999987533
No 13
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=96.34 E-value=0.0087 Score=67.18 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=93.6
Q ss_pred hhHhhHHHHHHHHHHhCCCCeEEEee-------HHH---HHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCC
Q 002162 16 ACVQNVLDSLIPALVADKNRKFIYVE-------QAF---FQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPH 85 (958)
Q Consensus 16 ~~v~~il~~vl~~L~~~p~~kF~~~E-------~~~---~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~ 85 (958)
....+-|+..++.+++...|.=...+ +.+ ....|+..+.+.-++||++.++|.+|+++.+.+-.---+-.
T Consensus 75 ~ry~~~Le~~~el~e~e~~R~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~ll~~f~~~~~~g~ieilts~athg~lPll~ 154 (504)
T COG1543 75 DRYLRYLEWKIELSEKEEKRYADQSLRELAEFYIPEFLNARGYWEQYDGNLLEAFKELQRSGGIEILTSAATHGYLPLLG 154 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCCceeeeehhhheehhhcC
Confidence 34555666666666655433201111 112 24688888999999999999999999999876654433333
Q ss_pred H-HHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEe
Q 002162 86 Y-IDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFA 139 (958)
Q Consensus 86 ~-es~Irql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~ 139 (958)
. |++=-|+..|.+-..++||..|+--|+| --++...++.+| +.+||++++.-
T Consensus 155 ~peAi~AQi~~g~~~ye~~fg~~P~GiWlP-Ecay~pgie~~l-~~~Gi~yf~vd 207 (504)
T COG1543 155 GPEAIEAQILTGIELYEEHFGLAPKGIWLP-ECAYAPGIERIL-KDAGIEYFFVD 207 (504)
T ss_pred CchhhHHHHHHHHHHHHHHhCCCCCceech-hhccccchHHHH-HhcCceEEEec
Confidence 4 8899999999999999999999999999 569999999999 89999999986
No 14
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase []. It also includes chitin deacetylase from yeast [], and endoxylanases which hydrolyses glucosidic bonds in xylan [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0005975 carbohydrate metabolic process; PDB: 2IW0_A 2CC0_B 2VYO_A 2J13_A 2C71_A 2C79_A 1W1A_1 1W1B_1 1W17_A 1NY1_B ....
Probab=95.55 E-value=0.15 Score=48.07 Aligned_cols=105 Identities=18% Similarity=0.297 Sum_probs=78.3
Q ss_pred hhHHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHH
Q 002162 19 QNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 97 (958)
Q Consensus 19 ~~il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~ 97 (958)
......+++.|.++.= .+|... ..+..+. .+.+++++++| +||.+=||.-++-...+.+.+.++|..+.
T Consensus 17 ~~~~~~~~~~l~~~~i~at~fv~-~~~~~~~--------~~~l~~l~~~G-~ei~~H~~~H~~~~~~~~~~~~~ei~~~~ 86 (123)
T PF01522_consen 17 RDNYDRLLPLLKKYGIPATFFVI-GSWVERY--------PDQLRELAAAG-HEIGNHGWSHPNLSTLSPEELRREIERSR 86 (123)
T ss_dssp HTHHHHHHHHHHHTT--EEEEE--HHHHHHH--------HHHHHHHHHTT--EEEEE-SSSSCGGGS-HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcccceeeeec-ccccccc--------cccchhHHHHH-HHHHhcCCcccccccCCHHHHHHHHHHHH
Confidence 6777889999999752 344443 2233222 67899999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCCCceeeecCCCCC-ChhhHHHHHhhcCCcEE
Q 002162 98 RYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 136 (958)
Q Consensus 98 ~~l~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G~~~~ 136 (958)
++|++.+|..|+ +-.=|||. +..+-+++ +++||++.
T Consensus 87 ~~l~~~~g~~~~--~f~~P~g~~~~~~~~~l-~~~G~~y~ 123 (123)
T PF01522_consen 87 EILEEITGRPPK--GFRYPFGSYDDNTLQAL-REAGYKYD 123 (123)
T ss_dssp HHHHHHHSSEES--EEE-GGGEECHHHHHHH-HHTT-EEE
T ss_pred HHHHHHhCCCCc--EEECCCCCCCHHHHHHH-HHcCCCcC
Confidence 999999999444 34458886 77788999 89999873
No 15
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=94.34 E-value=4.8 Score=44.44 Aligned_cols=112 Identities=18% Similarity=0.121 Sum_probs=84.9
Q ss_pred hHhhHHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHH
Q 002162 17 CVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTL 95 (958)
Q Consensus 17 ~v~~il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~ 95 (958)
+.+.=+-.+++.|+++-= -+|... -|+.+.+|+ .+|+++++| .||.+=||...+-..-+.+...++|..
T Consensus 74 G~rvG~~RiLdlL~~~gv~aTffv~------g~~~e~~P~---~v~~i~~~G-HEIg~Hg~~H~~~~~ls~~~e~~~i~~ 143 (297)
T TIGR03212 74 GSRAGFWRLLRLFTERGIPVTVFGV------AMALARNPE---AVAAMKEAG-WEIASHGLRWIDYQDMDEAQEREHIAE 143 (297)
T ss_pred cchhCHHHHHHHHHHcCCCEEEEeE------HHHHHHCHH---HHHHHHHcC-CEEeeccccCcccccCCHHHHHHHHHH
Confidence 344556678889988753 356554 244456675 567777889 899999998887777788899999999
Q ss_pred HHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhh-cCCcEEEEeecC
Q 002162 96 GHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE-VGFDFLFFARID 142 (958)
Q Consensus 96 G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~-~G~~~~~~~Ri~ 142 (958)
+.+-|++..|.+| .||.. -.+|..++.|+ +. .||.+..-+..+
T Consensus 144 s~~~i~~~tG~~P-~G~~~--~~~s~~T~~LL-~e~~Gf~Y~sd~~~d 187 (297)
T TIGR03212 144 AIRLHTEVTGERP-LGWYT--GRTSPNTRRLV-AEEGGFLYDADSYAD 187 (297)
T ss_pred HHHHHHHHhCCCC-ceEEC--CCCChhHHHHH-HHhcCceEeCchhhc
Confidence 9999988888765 56763 36799999999 88 999987665554
No 16
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=92.68 E-value=3.1 Score=50.45 Aligned_cols=98 Identities=19% Similarity=0.293 Sum_probs=74.8
Q ss_pred eEEEeeH-HHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCC----CHHHHHHHHHHHHHHHHHHcCCCCce
Q 002162 36 KFIYVEQ-AFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAP----HYIDMIDQTTLGHRYIKEQFNVTPRI 110 (958)
Q Consensus 36 kF~~~E~-~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~----~~es~Irql~~G~~~l~~~fG~~p~v 110 (958)
-|++++. .++ .+-....++.-+.+|++++.|+.|++.--|--+=-.+. -+++.++|+..+....++-||+.|+.
T Consensus 161 ~ys~~g~~~il-~~~~~~~~~vl~~~r~l~e~g~~e~~~~pyyHsl~pl~~d~gw~~d~~~qv~~~~~~~~elfG~~p~~ 239 (615)
T COG1449 161 NYSLSGGETIL-EQQLDEAPRVLEAFRELAESGKVELTASPYYHSLIPLLADDGWYEDFKEQVMMSRELYKELFGVWPSG 239 (615)
T ss_pred ceeccccHHHH-HHHHHHHhhhHHHHHHHHhcCceEEEecccccccchhcccCCchHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 3666652 232 23333368888999999999999998866644433222 45699999999999999999999999
Q ss_pred eeecCCCCCChhhHHHHHhhcCCcEE
Q 002162 111 GWQIDPFGHSAVQAYLLSAEVGFDFL 136 (958)
Q Consensus 111 gW~~D~FGhs~~~p~ll~~~~G~~~~ 136 (958)
.|.+- +=.+.++..++ +.+|+...
T Consensus 240 ~~~tE-l~y~~~i~~~~-~e~G~~~~ 263 (615)
T COG1449 240 FWNTE-LAYNDQILEYF-EESGFSWI 263 (615)
T ss_pred ccChh-hhccHHHHHHH-HHcCCccc
Confidence 99864 56788999999 99999953
No 17
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide deacetylases (pfam01522). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. The highest scoring homologs below the trusted cutoff for this model are found in several species of Methanosarcina, an archaeal genus.
Probab=91.44 E-value=1.6 Score=47.33 Aligned_cols=112 Identities=16% Similarity=0.239 Sum_probs=83.8
Q ss_pred hhHhhHHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHH
Q 002162 16 ACVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTT 94 (958)
Q Consensus 16 ~~v~~il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~ 94 (958)
..|...+..+++.|+++.= -+|.... |+.+.+| +.+|+++++| .||.+=||.-.+-..-+.+.+..++.
T Consensus 24 ~rv~~nt~riL~lL~~~gikATFFv~g------~~~e~~p---~lir~i~~~G-hEIgsHg~sH~~l~~ls~ee~~~eI~ 93 (265)
T TIGR03006 24 CRVERNTDRILDLLDRHGVKATFFTLG------WVAERYP---ELVRRIVAAG-HELASHGYGHERVTTQTPEAFRADIR 93 (265)
T ss_pred chHHHhHHHHHHHHHHcCCcEEEEEec------cchhhCH---HHHHHHHHcC-CEeeeccccCcCchhCCHHHHHHHHH
Confidence 4566778889999999864 3666542 3445566 4599999999 69999999888777778899999999
Q ss_pred HHHHHHHHHcCCCCceeeecCCCCCC---hhhHHHHHhhcCCcEEEEe
Q 002162 95 LGHRYIKEQFNVTPRIGWQIDPFGHS---AVQAYLLSAEVGFDFLFFA 139 (958)
Q Consensus 95 ~G~~~l~~~fG~~p~vgW~~D~FGhs---~~~p~ll~~~~G~~~~~~~ 139 (958)
...+.|++..|..|+ ||-.=.+..+ .....++ +++||.+..-.
T Consensus 94 ~s~~~Le~itG~~~~-gfRaP~~s~~~~t~~a~~iL-~e~Gy~YdsS~ 139 (265)
T TIGR03006 94 RSKALLEDLSGQPVR-GYRAPSFSIGKKNLWALDVL-AEAGYRYSSSI 139 (265)
T ss_pred HHHHHHHHHhCCCce-EEECCCCCCCCCcHHHHHHH-HHCCCEEEEee
Confidence 999999988888766 5643333333 3346899 89999986554
No 18
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=91.13 E-value=2.8 Score=42.95 Aligned_cols=102 Identities=14% Similarity=0.244 Sum_probs=78.4
Q ss_pred HHHHHHHHHhCCCC-eEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHH
Q 002162 22 LDSLIPALVADKNR-KFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYI 100 (958)
Q Consensus 22 l~~vl~~L~~~p~~-kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l 100 (958)
...+++.|+++.=. +|.... .|. +.+| +.+|+++++|- ||-+-+|.-++-..-+.+.+.+++..+.+.+
T Consensus 21 t~~~l~~L~~~~ikaTfFv~g-----~~~-~~~~---~~~~~i~~~Gh-eig~Ht~~H~~~~~~~~~~~~~ei~~~~~~l 90 (191)
T TIGR02764 21 TEPILDTLKEYDVKATFFLSG-----SWA-ERHP---ELVKEIVKDGH-EIGSHGYRHKNYTTLEDEKIKKDILRAQEII 90 (191)
T ss_pred HHHHHHHHHHcCCCEEEEecc-----HHH-HHCH---HHHHHHHhCCC-EEEECCcCCCCcccCCHHHHHHHHHHHHHHH
Confidence 35678888888533 555442 233 3344 57889999995 8999999998888888999999999999999
Q ss_pred HHHcCCCCceeeecCCCCC-ChhhHHHHHhhcCCcEE
Q 002162 101 KEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 136 (958)
Q Consensus 101 ~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G~~~~ 136 (958)
++..|..|+ |--=|+|. +..+.+++ ++.|+..+
T Consensus 91 ~~~~g~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 124 (191)
T TIGR02764 91 EKLTGKKPT--LFRPPSGAFNKAVLKAA-ESLGYTVV 124 (191)
T ss_pred HHHhCCCCC--EEECCCcCCCHHHHHHH-HHcCCeEE
Confidence 999998876 45567775 67778888 89999854
No 19
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=90.55 E-value=2.8 Score=44.30 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=79.0
Q ss_pred HHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHHH
Q 002162 23 DSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 101 (958)
Q Consensus 23 ~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~ 101 (958)
..+++.|+++.= .+|.... .|. +..| +.+|+++++|- ||-+-+|.-++-...+.+.+.++|....+.|+
T Consensus 53 ~~lL~~L~~~~vkATFFv~G-----~~~-~~~p---~~ir~i~~~Gh-eIgnHt~~H~~~~~ls~~~~~~ei~~~~~~i~ 122 (224)
T TIGR02884 53 PKILDVLKEKKVPAAFFVTG-----HYI-KTQP---DLIKRMVDEGH-IVGNHSVHHPSLTAVNDEKFKEELTGVEEEFK 122 (224)
T ss_pred HHHHHHHHHcCCCeEEEeec-----hhh-HHCH---HHHHHHHHcCC-EeeecCccCcCcccCCHHHHHHHHHHHHHHHH
Confidence 457888988853 3565543 233 3344 57899999995 68888999888888899999999999999999
Q ss_pred HHcCCCCceeeecCCCCC-ChhhHHHHHhhcCCcEE
Q 002162 102 EQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 136 (958)
Q Consensus 102 ~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G~~~~ 136 (958)
+..|..+ ..|--=|+|. +..+.+++ +++|+..+
T Consensus 123 ~~~G~~~-~~~fR~P~G~~~~~~~~~l-~~~Gy~~v 156 (224)
T TIGR02884 123 KVTGQKE-MKYFRPPRGVFSERTLAYT-KELGYYTV 156 (224)
T ss_pred HHhCCCC-CCEEeCCCCCcCHHHHHHH-HHcCCcEE
Confidence 9889762 3367778994 77889999 89999864
No 20
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=88.00 E-value=6.6 Score=42.69 Aligned_cols=102 Identities=21% Similarity=0.348 Sum_probs=80.4
Q ss_pred HHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHH
Q 002162 21 VLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRY 99 (958)
Q Consensus 21 il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~ 99 (958)
....+++.|.++-= .+|.... .|. +.+|+ .+|+++++|. ||-+=+|.-++-..-+.+.+.++|..+.+.
T Consensus 99 ~t~~iL~iLkk~~vkATFFv~G-----~~i-~~~p~---l~k~i~~~Gh-eIGnHT~sH~~l~~ls~~~~~~Ei~~~~~~ 168 (268)
T TIGR02873 99 YLPEILQILKKHDVKATFFLEG-----KWV-KENSQ---LAKMIVEQGH-EIGNHAYNHPDMATLSKEEIYDQINQTNEI 168 (268)
T ss_pred hHHHHHHHHHHCCCCEEEEeeh-----Hhh-hHCHH---HHHHHHHCCC-EEEecCCcCCCcccCCHHHHHHHHHHHHHH
Confidence 34578889988864 3666653 344 34553 5788899995 788999998888888999999999999999
Q ss_pred HHHHcCCCCceeeecCCCCC-ChhhHHHHHhhcCCcE
Q 002162 100 IKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 135 (958)
Q Consensus 100 l~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G~~~ 135 (958)
+++..|..|+ |--=|+|. +..+.+++ +.+|+..
T Consensus 169 i~~~~G~~p~--~fRpP~G~~n~~~~~~l-~~~G~~~ 202 (268)
T TIGR02873 169 IEATIGVTPK--WFAPPSGSFNDNVVQIA-ADLQMGT 202 (268)
T ss_pred HHHHhCCCCC--EEECCCCCCCHHHHHHH-HHCCCeE
Confidence 9999999887 66678987 57788888 8999864
No 21
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=72.51 E-value=1e+02 Score=38.04 Aligned_cols=151 Identities=17% Similarity=0.300 Sum_probs=97.6
Q ss_pred HHHHHHHhCCCeEEEcceeeecccC--------------------CCCHH-------HHHHHHHHHHHHHHHHcCCCCce
Q 002162 58 NVVKQLVNSGQLELINGGMCMHDEA--------------------APHYI-------DMIDQTTLGHRYIKEQFNVTPRI 110 (958)
Q Consensus 58 ~~vk~LV~~GrlE~vgGgwv~~Dea--------------------~~~~e-------s~Irql~~G~~~l~~~fG~~p~v 110 (958)
+.||+++++|-+||-+=+|..|.-. ...|| .+.+.+....+.|++..|..|++
T Consensus 168 eqIreM~~sGlvEIGSHT~~sH~~l~anp~g~~~pa~~~r~~~~~~~~yEs~~e~~~ri~~DL~~s~~~Ie~~tG~~p~~ 247 (671)
T PRK14582 168 QQVREVARSRLVEIASHTWNSHYGIQANPQGSLLPAAVNRAYFTDHARYETAAEYRERIRLDAVKMTEYIRTKAGKNPRV 247 (671)
T ss_pred HHHHHHHhCCCeEEEcCCchhccccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 6899999999999878888655311 11222 26678999999999999998874
Q ss_pred eeecCCCCC-ChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEEeCCCCCCCCCCCCcc
Q 002162 111 GWQIDPFGH-SAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYF 189 (958)
Q Consensus 111 gW~~D~FGh-s~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~~f~f 189 (958)
..=|||+ +.....++ +++||+..++.+-.... .+.. |..| + +
T Consensus 248 --FayPyG~~n~~~~~ia-keaGY~~afT~~~G~~~----------------------~~~~--------~~Lp-R-i-- 290 (671)
T PRK14582 248 --WVWPYGEANGIALEEL-KKLGYDMAFTLESGLAN----------------------ASQL--------DSIP-R-V-- 290 (671)
T ss_pred --EecCCCCCCHHHHHHH-HHCCCeEEEEeCCCCCC----------------------CCCc--------Cccc-e-E--
Confidence 5678995 67788999 89999988876532100 0000 1111 0 0
Q ss_pred ccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCC-cchhHHHHHHHHHHHHHhcCC
Q 002162 190 EVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKY-QYAHTWFRQMDKFIHYVNQDG 263 (958)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y-~~a~~~~~~~~~li~~iN~~~ 263 (958)
... .++ . ++.|...+... ......+++-.+-|+-| .++..+-++++.+|+.+.+.+
T Consensus 291 ~I~-------~~~-----s----l~~f~~~v~~~--~~~~~~r~~h~dld~vyd~dp~qq~~~L~~lLdrlk~~G 347 (671)
T PRK14582 291 LIA-------NNP-----S----LKEFAQQIITV--QEKSPQRVMHIDLDYVYDENPQQQDRNIDVLIQRVKDMQ 347 (671)
T ss_pred Eec-------CCC-----C----HHHHHHHHhcc--cCCCCEEEEEeccccccCCCHHHHHHHHHHHHHHHHHcC
Confidence 000 000 1 23455444321 23555677888888888 466667899999999988764
No 22
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=67.13 E-value=6.7 Score=32.02 Aligned_cols=23 Identities=39% Similarity=0.647 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhCCCeEEEccee
Q 002162 54 EEVQNVVKQLVNSGQLELINGGM 76 (958)
Q Consensus 54 p~~~~~vk~LV~~GrlE~vgGgw 76 (958)
++.++-+-++|++|+||++||-|
T Consensus 36 ~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 36 EELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp HHHHHHHHHHHHTTSEE--TTEE
T ss_pred HHHHHHHHHHHHCCcEEecCCEE
Confidence 45667788999999999999987
No 23
>PRK15394 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional
Probab=65.01 E-value=2.2e+02 Score=31.37 Aligned_cols=81 Identities=11% Similarity=0.027 Sum_probs=61.3
Q ss_pred HHHHHHHhCCCeEEEcceeeec----ccCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCC
Q 002162 58 NVVKQLVNSGQLELINGGMCMH----DEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGF 133 (958)
Q Consensus 58 ~~vk~LV~~GrlE~vgGgwv~~----Dea~~~~es~Irql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~ 133 (958)
+.+|+.+++ -|+.+=||.-. ....-+.+.+.++|..+.+-|++..|..|+ ||-+=.+-.+..+..++ +++||
T Consensus 92 ~lvr~i~~~--HEIG~Hg~~H~~wq~~~~~ls~~e~~~eI~ra~~~Le~itG~~p~-g~raPgw~~~~~tl~ll-~e~Gf 167 (296)
T PRK15394 92 DIIREAAKA--HEVGLHAWDHHAWQAWSGVWSRQQLIEQIARGVDALEEIIGQPVT-CSAAAGWRADQRVVEAK-EAFGF 167 (296)
T ss_pred HHHHHHHhc--CEehhcccCccchhcccccCCHHHHHHHHHHHHHHHHHHhCCCCC-EEeCCCccCCHHHHHHH-HHcCC
Confidence 456777776 99877788755 234557788999999999999998887754 56655555678889999 89999
Q ss_pred cEEEEeecC
Q 002162 134 DFLFFARID 142 (958)
Q Consensus 134 ~~~~~~Ri~ 142 (958)
.|---.|.+
T Consensus 168 ~Y~Ss~~~d 176 (296)
T PRK15394 168 RYNSDCRGT 176 (296)
T ss_pred eeecCCCCC
Confidence 997544543
No 24
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=64.88 E-value=23 Score=43.43 Aligned_cols=115 Identities=17% Similarity=0.247 Sum_probs=80.5
Q ss_pred HhhHHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHH----------------HHHHHHHHHhCCCeEEEcceeeecc
Q 002162 18 VQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEE----------------VQNVVKQLVNSGQLELINGGMCMHD 80 (958)
Q Consensus 18 v~~il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~----------------~~~~vk~LV~~GrlE~vgGgwv~~D 80 (958)
-+..+..++..|+++-- .+|..+. .|+... +. ..++||+++++|-+||-+=+|..+.
T Consensus 117 y~sny~~AlPILKkyg~pATfFvVg-----~wid~~-~~~~v~~~~~~~~r~~~LTW~qIrEM~~sGLvEIGSHT~sHh~ 190 (672)
T PRK14581 117 YSSFYRRVYPLLKAYKWSAVLAPVG-----TWIDTA-TDKKVDFGGLSTDRDRFATWKQITEMSKSGLVEIGAHTYASHY 190 (672)
T ss_pred CcchHHHHHHHHHHcCCCEEEEEec-----hhhccC-cccccccccccccccccCCHHHHHHHHHCCCcEEEcCCccccc
Confidence 34567778888888742 2333221 355432 21 2368999999999999888887763
Q ss_pred c--------------------CCCCHHH-------HHHHHHHHHHHHHHHcCCCCceeeecCCCCC-ChhhHHHHHhhcC
Q 002162 81 E--------------------AAPHYID-------MIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVG 132 (958)
Q Consensus 81 e--------------------a~~~~es-------~Irql~~G~~~l~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G 132 (958)
- ....+|+ +-+.+....+.|++..|..|+. ..=|||+ +...-.++ +++|
T Consensus 191 ~~~~np~g~~~pa~~~~~y~~~~~~yEs~~~~~~rl~~Di~~s~~~Ie~~lG~~p~~--FayPyG~yn~~~~~ia-k~aG 267 (672)
T PRK14581 191 GVIANPQGNTEPAAANLQYDPKTKQYETVEAFKQRMEKDVALITQRIVQATGKQPRV--WVWPYGAPNGTVLNIL-RQHG 267 (672)
T ss_pred ccccCccccccchhhhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCCE--EEcCCCCcCHHHHHHH-HHCC
Confidence 1 1222432 5566888889999999998874 5578995 78889999 8999
Q ss_pred CcEEEEeec
Q 002162 133 FDFLFFARI 141 (958)
Q Consensus 133 ~~~~~~~Ri 141 (958)
|+..++.+-
T Consensus 268 y~~afTt~~ 276 (672)
T PRK14581 268 YQLAMTLDP 276 (672)
T ss_pred CcEEEECCC
Confidence 999887663
No 25
>PF07481 DUF1521: Domain of Unknown Function (DUF1521); InterPro: IPR011086 This domain of unknown function is found in a limited set of Bradyrhizobium proteins. There appears to be a periodic -DG- motif in the domain.
Probab=54.20 E-value=98 Score=30.41 Aligned_cols=95 Identities=9% Similarity=0.038 Sum_probs=53.2
Q ss_pred CceEEc-cCeEEEEEECCCCcEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCCCccCCCCCceEEEEe
Q 002162 543 DTIEVG-PGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTYPIEPEGQLSFTILR 621 (958)
Q Consensus 543 ~~~~ie-N~~~~v~~~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~~~~~~~~~~~i~v~~ 621 (958)
..-+|+ ++.|+|.++.+++.+. |++|++|....+--+-.+.. +++...+|+|.-+. .+.+..-.+|.|..
T Consensus 8 gkati~lgd~Y~I~~~e~ds~~~-itnk~tG~~TriwGDPHvd~------~Gdg~~~fDFk~~~--tf~L~DGTKItV~T 78 (171)
T PF07481_consen 8 GKATIDLGDGYTIEANEKDSEWT-ITNKQTGETTRIWGDPHVDA------DGDGKTDFDFKGDM--TFQLDDGTKITVDT 78 (171)
T ss_pred CeeEEecCCceEEEecCCcceEE-EecCCCCcEeEEeCCCcccc------CCCcccceeecCce--EEEeCCCCEEEEee
Confidence 445677 7889999997788985 99999999876543322211 12223478886433 34444444555532
Q ss_pred CCceEEEEEEEcCeEEEEEEEecCCCceeEE
Q 002162 622 GPLLDEVHQRINPWIYQVTRVYKGKDHAEIE 652 (958)
Q Consensus 622 Gpl~~~v~~~~~s~i~q~irL~~~~~~ie~e 652 (958)
=|.-. ...+...+.+.++...+.++
T Consensus 79 ~p~gn------g~T~askLtIt~Gd~~~~V~ 103 (171)
T PF07481_consen 79 VPWGN------GMTYASKLTITNGDNAWQVE 103 (171)
T ss_pred eecCC------CcEEeeeEEEEcCCceEEEe
Confidence 22111 11223344556666655554
No 26
>TIGR03826 YvyF flagellar operon protein TIGR03826. This gene is found in flagellar operons of Bacillus-related organisms. Its function has not been determined and an official gene symbol has not been assigned, although the gene is designated yvyF in B. subtilus. A tentative assignment as a regulator is suggested in the NCBI record GI:16080597.
Probab=38.95 E-value=19 Score=34.69 Aligned_cols=50 Identities=14% Similarity=0.266 Sum_probs=37.2
Q ss_pred hHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEc
Q 002162 17 CVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELIN 73 (958)
Q Consensus 17 ~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vg 73 (958)
.-..-|..|-+.|.++|.+.-+..|++ +...-..+.|.++|++|||++.+
T Consensus 27 ~~e~~f~kV~~yLr~~p~~~ati~eV~-------e~tgVs~~~I~~~IreGRL~~~~ 76 (137)
T TIGR03826 27 EEEREFEKVYKFLRKHENRQATVSEIV-------EETGVSEKLILKFIREGRLQLKH 76 (137)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHH-------HHHCcCHHHHHHHHHcCCeeccC
Confidence 345678889999999999877765543 22333456899999999999865
No 27
>PRK10148 hypothetical protein; Provisional
Probab=29.59 E-value=20 Score=35.11 Aligned_cols=17 Identities=24% Similarity=0.233 Sum_probs=14.8
Q ss_pred CceeeecCCCCCChhhH
Q 002162 108 PRIGWQIDPFGHSAVQA 124 (958)
Q Consensus 108 p~vgW~~D~FGhs~~~p 124 (958)
++.||..|+||++|++-
T Consensus 123 ~~~g~v~D~fGi~W~l~ 139 (147)
T PRK10148 123 HGFGKVTDKFGVPWMIN 139 (147)
T ss_pred hccEEEECCCCCEEEEE
Confidence 47899999999999764
No 28
>PF06044 DRP: Dam-replacing family; InterPro: IPR010324 Dam-replacing protein (DRP) is a restriction endonuclease that is flanked by pseudo-transposable small repeat elements. The replacement of Dam-methylase by DRP allows phase variation through slippage-like mechanisms in several pathogenic isolates of Neisseria meningitidis [].; PDB: 4ESJ_A.
Probab=29.04 E-value=81 Score=33.25 Aligned_cols=60 Identities=12% Similarity=0.163 Sum_probs=44.5
Q ss_pred hHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHH-------HHHHHHHHHhCCCeEEEccee
Q 002162 17 CVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEE-------VQNVVKQLVNSGQLELINGGM 76 (958)
Q Consensus 17 ~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~-------~~~~vk~LV~~GrlE~vgGgw 76 (958)
.-+--+-.++.-+++=|...|+..++.-|+.-+...+|. .|++++-|=..|-|||+|.|-
T Consensus 184 ~~rGWlldi~~cid~i~~~~FtL~diY~Fe~~L~~~~P~N~~Ik~KIRQqLQ~LRD~g~IeFl~rG~ 250 (254)
T PF06044_consen 184 ESRGWLLDIMKCIDKIPKNEFTLDDIYAFEDELQIKYPNNNHIKAKIRQQLQILRDKGIIEFLGRGR 250 (254)
T ss_dssp HHHHHHHHHHHHHHHS-SSEEEHHHHHTTHHHHHHHSTT-S-HHHHHHHHHHHHHHTTSEEE-STTE
T ss_pred cccchHHHHHHHHHhcCccceeHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHhhCCceEEecCCc
Confidence 344556677888888999999999998788888777773 455566666789999999774
No 29
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=28.46 E-value=3.7e+02 Score=30.48 Aligned_cols=29 Identities=21% Similarity=0.099 Sum_probs=24.3
Q ss_pred CCceEEccCeEEEEEECCCCcEEEEEecc
Q 002162 542 NDTIEVGPGNLKLLYSGKRAKLMRYINSK 570 (958)
Q Consensus 542 ~~~~~ieN~~~~v~~~~~~G~i~si~dk~ 570 (958)
...++|+|+.++++|+...|.|.++..|+
T Consensus 73 ~~~i~v~td~~~~~is~~Gg~i~~~~Lk~ 101 (366)
T TIGR03593 73 AKRITVKTDVLRASISTKGGDIDSLELKK 101 (366)
T ss_pred CCeEEEECCeEEEEEeCCCceeeeecccc
Confidence 34689999999999997778999887664
No 30
>PF10074 DUF2285: Uncharacterized conserved protein (DUF2285); InterPro: IPR018754 This entry contains uncharacterised proteins of unknown function.
Probab=25.00 E-value=14 Score=34.05 Aligned_cols=28 Identities=25% Similarity=0.614 Sum_probs=24.3
Q ss_pred HHHhccCHHHHHHHHHHHhCCCeEEEcceee
Q 002162 47 RWWRDQSEEVQNVVKQLVNSGQLELINGGMC 77 (958)
Q Consensus 47 ~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv 77 (958)
.||+. ...+.+++.||+.|++ ++.|||-
T Consensus 75 ~~W~~--~~~R~~~~rll~~a~~-l~~gGYr 102 (106)
T PF10074_consen 75 DEWKD--SSLRRRVRRLLRRARA-LMEGGYR 102 (106)
T ss_pred ccccC--hHHHHHHHHHHHHHHH-HHHhhHH
Confidence 58864 7799999999999999 8999984
No 31
>PF13289 SIR2_2: SIR2-like domain
Probab=24.43 E-value=4.2e+02 Score=24.90 Aligned_cols=86 Identities=17% Similarity=0.254 Sum_probs=57.7
Q ss_pred CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeec
Q 002162 35 RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQI 114 (958)
Q Consensus 35 ~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~vgW~~ 114 (958)
..++..+..|. +.+ ...+...+.++.+.++.-+-|+ ||-+.|. -|++++ +.+.+..+..++-.|.+
T Consensus 57 ~~~vlt~~~y~-~~~-~~~~~~~~~l~~~l~~~~~lfi--Gys~~D~-------~i~~~l---~~~~~~~~~~~~~~~~v 122 (143)
T PF13289_consen 57 ESIVLTEDDYE-EYY-SSNPWFPNFLRSLLRSKTLLFI--GYSFNDP-------DIRQLL---RSALENSGKSRPRHYIV 122 (143)
T ss_pred CCEEEcHHHHH-HHh-hhHHHHHHHHHHHHcCCCEEEE--EECCCCH-------HHHHHH---HHHHHhccCCCccEEEE
Confidence 34566666665 444 3578889999999999999888 5667666 344444 33555666644555666
Q ss_pred CCCCCChhhHHHHHhhcCCcE
Q 002162 115 DPFGHSAVQAYLLSAEVGFDF 135 (958)
Q Consensus 115 D~FGhs~~~p~ll~~~~G~~~ 135 (958)
.+-.-......++ +..|++-
T Consensus 123 ~~~~~~~~~~~~~-~~~~i~~ 142 (143)
T PF13289_consen 123 IPDPDDENEREFL-EKYGIEV 142 (143)
T ss_pred EcCCchHHHHHHH-HHcCCEE
Confidence 6666666777788 7888763
No 32
>PF00538 Linker_histone: linker histone H1 and H5 family; InterPro: IPR005818 Histone proteins have central roles in both chromatin organisation (as structural units of the nucleosome) and gene regulation (as dynamic components that have a direct impact on DNA transcription and replication). Eukaryotic DNA wraps around a histone octamer to form a nucleosome, the first order of compaction of eukaryotic chromatin. The core histone octamer is composed of a central H3-H4 tetramer and two flanking H2A-H2B dimers. Each of the core histone contains a common structural motif, called the histone fold, which facilitates the interactions between the individual core histones. In addition to the core histones, there is a "linker histone" called H1 (or H5 in avian species). The linker histones present in all multicellular eukaryotes are the most divergent group of histones, with numerous cell type- and stage-specific variant. Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures. Histone H5 performs the same function as histone H1, and replaces H1 in certain cells. The structure of GH5, the globular domain of the linker histone H5 is known [, ]. The fold is similar to the DNA-binding domain of the catabolite gene activator protein, CAP, thus providing a possible model for the binding of GH5 to DNA. The linker histones, which do not contain the histone fold motif, are critical to the higher-order compaction of chromatin, because they bind to internucleosomal DNA and facilitate interactions between individual nucleosomes. In addition, H1 variants have been shown to be involved in the regulation of developmental genes. A common feature of this protein family is a tripartite structure in which a globular (H15) domain of about 80 amino acids is flanked by two less structured N- and C-terminal tails. The H15 domain is also characterised by high sequence homology among the family of linker histones. The highly conserved H15 domain is essential for the binding of H1 or H5 to the nucleosome. It consists of a three helix bundle (I-III), with a beta-hairpin at the C terminus. There is also a short three-residue stretch between helices I and II that is in the beta-strand conformation. Together with the C-terminal beta-hairpin, this strand forms the third strand of an antiparallel beta-sheet [, , , ]. Proteins known to contain a H15 domain are: - Eukaryotic histone H1. The histones H1 constitute a family with many variants, differing in their affinity for chromatin. Several variants are simultaneously present in a single cell. For example, the nucleated erythrocytes of birds contain both H1 and H5, the latter being an extreme variant of H1. - Eukaryotic MHYST family of histone acetyltransferase. Histone acetyltransferases transfer an acetyl group from acetyl-CoA to the epsylon- amino group of lysine within the basic NH2-termini of histones, which bind the acidic phosphates of DNA []. This entry represents the H15 domain.; GO: 0003677 DNA binding, 0006334 nucleosome assembly, 0000786 nucleosome, 0005634 nucleus; PDB: 2LSO_A 2RQP_A 1UHM_A 1UST_A 1GHC_A 1HST_A 1YQA_A 1USS_A.
Probab=20.10 E-value=2.8e+02 Score=23.60 Aligned_cols=32 Identities=13% Similarity=0.311 Sum_probs=23.3
Q ss_pred HHHHHHHHhccCH----------HHHHHHHHHHhCCCeEEEc
Q 002162 42 QAFFQRWWRDQSE----------EVQNVVKQLVNSGQLELIN 73 (958)
Q Consensus 42 ~~~~~~W~~~~~p----------~~~~~vk~LV~~GrlE~vg 73 (958)
..-+.+|..+.++ ..+..++++|++|+|+-+.
T Consensus 24 ~~aI~kyI~~~y~~~~~~~~~~~~l~~aLk~~v~~G~l~~~k 65 (77)
T PF00538_consen 24 LQAIKKYIKAKYKVDLNPANFKSRLKRALKRGVEKGKLVQVK 65 (77)
T ss_dssp HHHHHHHHHHHSSCCCCHTTHHHHHHHHHHHHHHCTSEEECS
T ss_pred HHHHHHHHHHhcCcCCChHHHHHHHHHHHHHHHHCCcEEeec
Confidence 3334467665442 3678899999999999988
Done!