Query 002162
Match_columns 958
No_of_seqs 262 out of 1233
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 14:59:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 5E-158 2E-162 1485.1 89.7 872 16-956 105-1045(1045)
2 2wyh_A Alpha-mannosidase; hydr 100.0 6E-119 2E-123 1125.4 74.7 785 15-955 48-923 (923)
3 3lvt_A Glycosyl hydrolase, fam 100.0 9E-113 3E-117 1061.1 71.9 781 15-952 29-897 (899)
4 1o7d_A Lysosomal alpha-mannosi 100.0 2.4E-65 8.2E-70 553.6 28.8 259 6-266 36-297 (298)
5 1o7d_D Lysosomal alpha-mannosi 100.0 5.2E-64 1.8E-68 531.5 29.4 271 544-820 2-273 (282)
6 1o7d_C Lysosomal alpha-mannosi 100.0 3.6E-30 1.2E-34 255.5 17.5 150 343-524 2-151 (159)
7 1o7d_E Lysosomal alpha-mannosi 99.9 1.5E-25 5.2E-30 209.3 11.0 118 831-957 4-123 (126)
8 1o7d_B Lysosomal alpha-mannosi 99.9 2.6E-23 8.7E-28 177.5 7.7 74 264-337 2-75 (84)
9 1k1x_A 4-alpha-glucanotransfer 99.7 2.8E-15 9.7E-20 179.0 28.1 123 16-141 25-147 (659)
10 3p0b_A TT1467 protein; glycosi 98.8 2.2E-08 7.4E-13 114.7 13.2 285 49-359 137-481 (540)
11 3n98_A Alpha-amylase, GH57 fam 98.8 6E-08 2.1E-12 111.5 15.3 91 48-140 115-221 (562)
12 2b5d_X Alpha-amylase; (beta/al 98.6 5E-06 1.7E-10 96.8 25.4 81 58-140 126-208 (528)
13 3rxz_A Polysaccharide deacetyl 95.4 0.47 1.6E-05 51.0 18.1 233 19-296 61-298 (300)
14 3cl6_A PUUE allantoinase; URIC 95.1 1.1 3.6E-05 48.4 19.5 108 20-141 81-190 (308)
15 3s6o_A Polysaccharide deacetyl 94.8 3.5 0.00012 44.6 22.9 222 19-282 85-308 (321)
16 3qbu_A Putative uncharacterize 91.8 15 0.00052 39.5 21.6 109 19-140 73-183 (326)
17 2cc0_A Acetyl-xylan esterase; 89.7 1.8 6.1E-05 43.1 10.8 101 22-135 19-121 (195)
18 2y8u_A Chitin deacetylase; hyd 89.6 2 6.8E-05 44.1 11.4 104 20-136 45-150 (230)
19 1ny1_A Probable polysaccharide 85.7 3.5 0.00012 42.5 10.5 101 23-136 59-162 (240)
20 2j13_A Polysaccharide deacetyl 80.7 5.3 0.00018 41.3 9.4 101 23-136 71-174 (247)
21 2iw0_A Chitin deacetylase; hyd 77.9 3.8 0.00013 42.6 7.2 108 20-136 54-164 (254)
22 3vus_A Poly-beta-1,6-N-acetyl- 75.7 8.1 0.00028 40.5 9.1 83 57-142 126-236 (268)
23 2vyo_A ECU11_0510, chitooligos 74.2 6.5 0.00022 40.8 7.8 102 22-135 41-149 (254)
24 4f9d_A Poly-beta-1,6-N-acetyl- 71.0 21 0.00072 41.9 11.8 185 18-263 80-310 (618)
25 2c1i_A Peptidoglycan glcnac de 61.6 27 0.00093 39.1 9.9 97 23-134 252-349 (431)
26 1u69_A Hypothetical protein; s 54.6 4.4 0.00015 39.0 1.6 19 109-127 106-125 (163)
27 2c71_A Glycoside hydrolase, fa 47.4 27 0.00093 35.0 6.3 94 23-127 21-116 (216)
28 4hd5_A Polysaccharide deacetyl 43.4 60 0.0021 35.2 8.5 80 56-141 246-326 (360)
29 2w3z_A Putative deacetylase; P 39.6 44 0.0015 35.6 6.8 103 22-136 122-237 (311)
30 1ldd_A APC2WHB, anaphase promo 32.5 28 0.00095 28.6 2.8 23 54-76 48-71 (74)
31 4esj_A Type-2 restriction enzy 29.0 44 0.0015 33.6 4.1 60 17-76 187-253 (257)
32 3bs6_A Inner membrane protein 27.5 1.9E+02 0.0065 30.0 9.2 27 543-569 4-30 (280)
33 3blc_A Inner membrane protein 21.8 3.3E+02 0.011 28.9 9.9 29 542-570 34-62 (330)
34 1tsj_A Conserved hypothetical 20.9 24 0.00081 32.7 0.4 16 109-124 111-126 (139)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=4.8e-158 Score=1485.08 Aligned_cols=872 Identities=25% Similarity=0.423 Sum_probs=733.1
Q ss_pred hhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHH
Q 002162 16 ACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTL 95 (958)
Q Consensus 16 ~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~ 95 (958)
+++++||++||++|++||++||+|+|++||++||++++|+++++||+||++|||||+||||||+|||++||||+||||++
T Consensus 105 ~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~ 184 (1045)
T 3bvx_A 105 HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTE 184 (1045)
T ss_dssp HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEEe
Q 002162 96 GHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGI 175 (958)
Q Consensus 96 G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~ 175 (958)
||+|++++||+.|++||+|||||||++||||| ++|||++++|+|++|++++.|+..+.+||+|+|+|+..+||+||||+
T Consensus 185 G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil-~~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~ 263 (1045)
T 3bvx_A 185 GQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHM 263 (1045)
T ss_dssp HHHHHHHHHCCCCCEEEECCSSSBCTHHHHHH-HTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEE
T ss_pred HHHHHHHHhCCCCceEEcCCCCCccHHHHHHH-HHcCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEe
Confidence 99999999999999999999999999999999 99999999999999999999998999999999766555699999999
Q ss_pred CCC-CCC-----CCCC----CCccccCCC---CCCccCCc-ccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCC
Q 002162 176 SPK-NYE-----PPSD----NFYFEVGDT---SPIVQDDM-NLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFK 241 (958)
Q Consensus 176 ~~~-~Y~-----~p~~----~f~f~~~~~---~~~~~~~~-~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~ 241 (958)
+|. +|+ +|++ +|+|+.+.. .|||.++| .+.++|++++++.+++++++++..|+++++|+|+|+||+
T Consensus 264 ~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~ 343 (1045)
T 3bvx_A 264 MPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFR 343 (1045)
T ss_dssp CCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETC
T ss_pred ccccccCcccccCCCccccccccccccccccccCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCC
Confidence 994 675 3323 355655432 46665554 567889999999999999999989999999999999999
Q ss_pred CcchhHH---HHHHHHHHHHHhcCC--CeEEEEcChhhHHHHHHhcC----CCCCcccCCCccCCcCCCCceeeeeccch
Q 002162 242 YQYAHTW---FRQMDKFIHYVNQDG--RVNALYSTPSMYIDAKYAAN----ESWPLKTDDFFPYADRENAYWTGYFTSRP 312 (958)
Q Consensus 242 y~~a~~~---~~~~~~li~~iN~~~--~~~i~~sT~~~Yf~a~~~~~----~~~p~~~gDf~py~~~~~~yWtG~yTSr~ 312 (958)
|+++..| ++||+++|+++|+.+ .++++|||+++||+++++.. ..||++.|||+||++++++||+|||||||
T Consensus 344 ~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~ 423 (1045)
T 3bvx_A 344 FKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRP 423 (1045)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSH
T ss_pred CcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECCHHHHHHHHHhhcccccccCcccCCcccccccCCcccccceecccH
Confidence 9998765 899999999999753 68999999999999998753 36999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcc---ccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 002162 313 ALKGYVRTMSAYYLAARQLEFFKGR---NEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAA 389 (958)
Q Consensus 313 ~~K~~~R~~e~~L~~aE~l~~la~~---~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~ 389 (958)
.+|+++|++|++|++||+|+++|.. .++...++++|++|+++||||+||||++++|++||.+||.+|.+.++.+++.
T Consensus 424 ~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~ 503 (1045)
T 3bvx_A 424 YHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQ 503 (1045)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999854 3455678899999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCC---ccccccCCcccccCCCCccccCCCC---ceEEEEEcCCCceEeEEEEEEEeCCcEEEEcC
Q 002162 390 SLACLTEFSKNGCVNPI---TNFQQCPLLNISYCPPSEVDLSSGK---SLVVVVYNPLGWKREDIIRIPVINENVTVKDS 463 (958)
Q Consensus 390 ~l~~L~~~~~~~~~~~~---~~~~~~~~ln~s~c~~~~~~~~~~~---~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~ 463 (958)
+++.|+......+..+. .+++.|.+++.+.|+....-...++ ...|+|||||+|+|+++|+|+|+.+.+.|+|.
T Consensus 504 al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~ 583 (1045)
T 3bvx_A 504 SVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDL 583 (1045)
T ss_dssp HHHHHTBCTTTCCCCTTSCSEEEECSSSSCTTTCCCCCEECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEET
T ss_pred HHHHHhhccccccccccccccchhhhcccccccccccccccccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcC
Confidence 99999853222111111 2233455566777775421000122 56899999999999999999999999999999
Q ss_pred CCCEEEEEEeecccccccccccccccccCCCCCCCCcEEEEEEEeeCCCceEEEEEEeCCccCCcccccee---------
Q 002162 464 KGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTV--------- 534 (958)
Q Consensus 464 ~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~~~~~~~s~~--------- 534 (958)
+|++|++|+++.+.....+....+ ........|+|+|.++||||||++|.|............+.+
T Consensus 584 ~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~ 658 (1045)
T 3bvx_A 584 ANNPVEAQVSPVWSWHHDTLTKTI-----HPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTS 658 (1045)
T ss_dssp TCCEECEEEEEEEEEEEETTTTEE-----EEEEEEEEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCC
T ss_pred CCCEEeEEEeeccccccccccccc-----cccCCCCcEEEEEEeccCCceeEEEEEEecCCccccccccceeeccccccc
Confidence 999999999987643221100000 000012357899999999999999999876543210000011
Q ss_pred -eec-cccCCCceEEccCeE------EEEEECCCCcEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCC
Q 002162 535 -YKS-QIRQNDTIEVGPGNL------KLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGT 606 (958)
Q Consensus 535 -~~~-~~~~~~~~~ieN~~~------~v~~~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~ 606 (958)
... .....+...|||++| +|+||+ +|.|++|+||++|+++.+.++|.+|.+..+ ++.||||+|+|++.
T Consensus 659 ~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~L~si~dk~~g~e~~~~~~f~~Y~~~~~---~~~sgaY~F~P~~~ 734 (1045)
T 3bvx_A 659 LPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGLLKSIQLTQDSPHVPVHFKFLKYGVRSH---GDRSGAYLFLPNGP 734 (1045)
T ss_dssp CCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSCEEEEECSTTSCCEEEEEEEEEECBCSS---SCCCCSSCCCBSSS
T ss_pred ccccccccCCCceeecccccccccccEEEECC-CCcEEEEEEcCCCeEEEEeeEEEEEecccC---CCCCcceEecCCCC
Confidence 000 001234578999999 999995 999999999999999999999999976554 67899999999987
Q ss_pred C-ccCCCCCceEEEEeCCceEEEEEEEcCeEEEEEEEecCCCceeEEEEEccccccCCCCcEEEEEEEeeccCCCeEEEc
Q 002162 607 Y-PIEPEGQLSFTILRGPLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTD 685 (958)
Q Consensus 607 ~-~~~~~~~~~i~v~~Gpl~~~v~~~~~s~i~q~irL~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytD 685 (958)
. ++.. ....++|++|||+++|++.+ ++++|++|| ++++|||+++|+ |.+..|||++++|+|+|+|+..||||
T Consensus 735 ~~~~~~-~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL--~~~~ieie~~Vd---~~~~~~~el~~rf~t~i~s~~~fyTD 807 (1045)
T 3bvx_A 735 ASPVEL-GQPVVLVTKGKLESSVSVGL-PSVVHQTIM--RGGAPEIRNLVD---IGSLDNTEIVMRLETHIDSGDIFYTD 807 (1045)
T ss_dssp CEECCC-CSCCEEEEECSSCEEEEEEE-TTEEEEEEE--SSSSCEEEEEEC---CTTCTTEEEEEEEEECCCCTTEEEEE
T ss_pred Cccccc-CCceEEEEeCCeEEEEEEEE-eeEEEEEEE--CCeeEEEEEEEe---cCCCCCeEEEEEeecccCCCCeEEEe
Confidence 5 3332 35678889999999999999 589999999 888999999994 55456999999999999998899999
Q ss_pred CCcccceecccccccCcccccCCccccceeeccceeeeeeCceeEEEEecCCccccccCCCeEEEEEEeeccCCCCcCcc
Q 002162 686 SSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVS 765 (958)
Q Consensus 686 snG~~~ikR~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~~~dD~rGv~ 765 (958)
+|||++++|+++. .+|+++|||||+++|+|+|++.|||||+||+||+||+++|+||||||||+++||+||||
T Consensus 808 ~nG~~~ikR~~~~--------~~p~~~NyYPv~s~~~i~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvg 879 (1045)
T 3bvx_A 808 LNGLQFIKRRRLD--------KLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLG 879 (1045)
T ss_dssp ETTTEEEEEECCT--------TSCGGGGCEEESSEEEEECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCC
T ss_pred cCCceeEEcCCCC--------CCCcccceEEeeeeEEEEcCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCccccc
Confidence 9999999999874 36889999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccCeEEEeEEEEeecCccchhh------------hccccchhhccCceeeeeccCCCccccccccccc
Q 002162 766 EALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK------------WRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYS 833 (958)
Q Consensus 766 e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~ 833 (958)
|||+|+ ++++|+|||++++...... ..|..++++++||+++++..+. + .....+|+
T Consensus 880 e~l~d~---------~~~~~~~~l~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~-~~~~~~~~ 947 (1045)
T 3bvx_A 880 QGVLDN---------KPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPLDKFIFAENE--W-IGAQGQFG 947 (1045)
T ss_dssp SCBCCC---------CCEEEEEEEEEEECTTSCCCCTTCSEECCCHHHHHHHHHHHSCCEEEEECSSC--C-TTBCSEEC
T ss_pred ccccCC---------ceeeeEEEEEEecccccccccccccccccCHHHHHHHHHHhCCcceeeccCcc--c-ccccccCC
Confidence 999986 4589999999987654331 2456788999999999876332 2 22346688
Q ss_pred cCcccccCCCcceEEEeeecCCCc-----EEEEEeec--cccccCCCCceeeeeeccccCCCCccceEEeccccccchhh
Q 002162 834 AMDTTYVLPDNVALITLQELDSGK-----ILLRLAHL--YEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERA 906 (958)
Q Consensus 834 ~l~~~~~lp~~i~l~tl~~~~~~~-----~llRl~~~--~~~~~~~~~s~~~~v~l~~lf~~~~~~~i~E~sLt~~~~~~ 906 (958)
++. .+|||||||+|||++++++ +|||| |. |+++++.. +++++|||.+||.. +++++||||+|++.++
T Consensus 948 ~l~--~~lP~~vhlltL~~~~~~~~~~~~~ll~L-~~~~~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~ 1021 (1045)
T 3bvx_A 948 GDH--PSAREDLDVSVMRRLTKSSAKTQRVGYVL-HRTNLMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLE 1021 (1045)
T ss_dssp TTS--CCCCTTEEEEEEEECSCTTCSEEEEEEEE-EECCCCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEE
T ss_pred ccc--ccCCCCEEEEEeEecCCCCccCceEEEEE-eeeccccCcCcc-cCcccccHHHHhcC--cceEEEecccCCcccc
Confidence 775 3899999999999999887 99999 55 88888765 78999999999998 9999999999998775
Q ss_pred hhhccceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEEEEEEee
Q 002162 907 VMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYS 956 (958)
Q Consensus 907 ~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P~eIrTf~i~~~~ 956 (958)
++. +...|+|+|||||||+|++++
T Consensus 1022 ~~~--------------------------~~~~v~l~PmeirTf~i~~~~ 1045 (1045)
T 3bvx_A 1022 HLD--------------------------GMVAPEVCPMETAAYVSSHSS 1045 (1045)
T ss_dssp ECG--------------------------GGCCCCCCTTCEEEEEEEEEC
T ss_pred ccC--------------------------CCcceEEcCceeEEEEEEeeC
Confidence 541 123689999999999999864
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=6e-119 Score=1125.43 Aligned_cols=785 Identities=15% Similarity=0.165 Sum_probs=618.6
Q ss_pred chhHhhHHHHHHHHHHhCCCCe-EEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHH
Q 002162 15 VACVQNVLDSLIPALVADKNRK-FIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQT 93 (958)
Q Consensus 15 ~~~v~~il~~vl~~L~~~p~~k-F~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql 93 (958)
..+++++|++||++|++||+++ |+|+|++++.+||.+++|+++++||+||++||||+ ||||||+||+++||||+||||
T Consensus 48 ~~~~~~~~~~vl~~l~~~p~~~~F~~~~q~~~~~~~~~~~p~~~~~vk~lV~~Grlei-G~wYv~~D~~~~~~es~irq~ 126 (923)
T 2wyh_A 48 HMRLINLIDDLLEVFQTDPDFHSFHLDGQTIILDDYLKVRPEREPEIRQAIASGKLRI-GPFYILQDDFLTSSESNVRNM 126 (923)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHHHHHHHHTTSEEC-CSBSSCBCSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHHCHHHHHHHHHHHHcCCEEE-eeeeeccccccCCHHHHHHHH
Confidence 4679999999999999999998 99988776668999999999999999999999996 766699999999999999999
Q ss_pred HHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecC----hHhH---HhhcccCceEEEEeeCCCCC
Q 002162 94 TLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARID----YQDR---AKRINEKTLEVVWRASKSLG 166 (958)
Q Consensus 94 ~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~----~~~k---~~~~~~~~~eF~W~g~d~~~ 166 (958)
++||+|+++ ||+.|++||+|||||||++||||| ++|||++++++|++ |+++ ..+...+.++|+|+|+|
T Consensus 127 ~~G~~~~~~-fG~~~~~~w~pD~FG~s~~lPqil-~~~Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~d--- 201 (923)
T 2wyh_A 127 LIGKEDCDR-WGASVPLGYFPDTFGNMGQTPQLM-LKAGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPD--- 201 (923)
T ss_dssp HHHHHHHHH-HTCCCSSEEESSCSSBCTTHHHHH-HTTTCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECTT---
T ss_pred HHHHHHHHH-cCCCCceeEecCCCCcchHHHHHH-HHcCCCEEEEEeccccccccccccchhhccCCCceEEEECCC---
Confidence 999999999 999999999999999999999999 99999999999999 8865 23344567899999999
Q ss_pred CCCceeEEeCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchh
Q 002162 167 SSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAH 246 (958)
Q Consensus 167 ~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~ 246 (958)
||+||||++|.+|+.+ ..+ . .+..|++++++.+++.++ +.+.++++|+|+|+||++..
T Consensus 202 -Gs~Ilt~~~p~~Y~~g-~~~-----------~----~~~~~v~~~~~~~~~~~~---~~~~t~~~l~~~G~D~~~~~-- 259 (923)
T 2wyh_A 202 -NSRILGLLFANWYSNG-NEI-----------P----TTEAEARLFWDKKLADAE---RFASTKHLLMMNGCDHQPVQ-- 259 (923)
T ss_dssp -CCEEEEEECTTCTTTT-CSC-----------C----SSHHHHHHHHHHHHHHHH---HHCSSSEEEEEECCBTCCCC--
T ss_pred -CCeEEEEECCCCccCC-CCC-----------C----CCHHHHHHHHHHHHHHHH---hcCCCCeEEEEeecCCCCcc--
Confidence 9999999999999866 111 0 123577777777766654 35899999999999998753
Q ss_pred HHHHHHHHHHHHHhc-CCCeEEEEcChhhHHHHHHhc-CCCCCcccCCCc-cCCcCCCCce-e--eeeccchhhhHHHHH
Q 002162 247 TWFRQMDKFIHYVNQ-DGRVNALYSTPSMYIDAKYAA-NESWPLKTDDFF-PYADRENAYW-T--GYFTSRPALKGYVRT 320 (958)
Q Consensus 247 ~~~~~~~~li~~iN~-~~~~~i~~sT~~~Yf~a~~~~-~~~~p~~~gDf~-py~~~~~~yW-t--G~yTSr~~~K~~~R~ 320 (958)
++|+++|+++|+ .+.++++|||+++||+++++. ...||++.|||+ ||+++ | | |||||||.+|++||+
T Consensus 260 ---~~~~~~i~~~n~~~~~~~~~~sT~~~yf~~l~~~~~~~lp~~~GEl~~~~~~~----W~th~G~~tSr~~~K~~nR~ 332 (923)
T 2wyh_A 260 ---LDVTKAIALANQLYPDYEFVHSCFEDYLADLADDLPENLSTVQGEITSQETDG----WYTLANTASARIYLKQANTR 332 (923)
T ss_dssp ---TTHHHHHHHHHHHCTTEEEEECCHHHHHHHHHHHSCSCCCEEESCBSCTTSCS----SSSCGGGGGTTHHHHHHHHH
T ss_pred ---hhHHHHHHHHHhhCCCceEEECCHHHHHHHHHhhccccCceecccccCccccc----ceecCCEeccHHHHHHHHHH
Confidence 789999999998 578999999999999999875 467999999986 77653 5 5 999999999999999
Q ss_pred HHHHH-HHHHHHHhhhcc---ccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002162 321 MSAYY-LAARQLEFFKGR---NEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTE 396 (958)
Q Consensus 321 ~e~~L-~~aE~l~~la~~---~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~ 396 (958)
+|++| ++||+|+++|.. .++...++++||+|+++||||+|||||+++|++||.+||.++.+.++.+++.+++.|+.
T Consensus 333 ~E~~L~~~aE~l~~la~~~g~~yp~~~L~~~Wk~ll~~Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~ 412 (923)
T 2wyh_A 333 VSRQLENITEPLAAMAYEVTSTYPHDQLRYAWKTLMQNHPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIAD 412 (923)
T ss_dssp HHHHHHHTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHhccCCCcCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 799999998743 45666789999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCccccccCCcccccCCCCccccCCCCceEEEEEcCCCceEeEEEEEEEe----------------------
Q 002162 397 FSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVI---------------------- 454 (958)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~ln~s~c~~~~~~~~~~~~~~v~v~Npl~~~r~~~V~i~v~---------------------- 454 (958)
.... .. ...+...++|||||+|+|+++|++++.
T Consensus 413 ~~~~---------------------~~----~~~~~~~vvvfN~l~~~r~~vV~v~v~~~~~~~~~~~~~~~~~~~~~~~ 467 (923)
T 2wyh_A 413 AIDT---------------------RD----FPMDSQPFVLFNTSGHSKTSVAELSLTWKKYHFGQRFPKEVYQEAQEYL 467 (923)
T ss_dssp TBCC---------------------TT----SCTTSEEEEEEECSSSCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred cccc---------------------cc----CCCCceEEEEEcCCCceEeEEEEEEEEcccccccccccccccchhhhhh
Confidence 4310 00 012345799999999999999999986
Q ss_pred ---CCcEEEEcCCCCEEE-EEEeecccccccccccccccccCC-CCCCCCcEEEEEEEeeCCCceEEEEEEeCCccCCcc
Q 002162 455 ---NENVTVKDSKGKVIE-SQLLPLLKDSMSLRNSYSTAYLGK-STNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHS 529 (958)
Q Consensus 455 ---~~~~~v~d~~g~~v~-~Qi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~f~~~vP~lG~~~~~i~~~~~~~~~~ 529 (958)
...+.|+|.+|++|| +|+++... .... + + ...|. .+.....++|.|.++||||||++|.|..........
T Consensus 468 ~~~~~~~~v~d~~G~~v~~~qi~~~~~-~~~~-~--~-~~~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~~~~ 542 (923)
T 2wyh_A 468 ARLSQSFQIIDTSGQVRPEAEILGTSI-AFDY-D--L-PKRSFREPYFAIKVRLRLPITLPAMSWKTLALKLGNETTPSE 542 (923)
T ss_dssp HTCCSEEEEECTTCCBCTTCEEEEEEE-EEEE-E--C-CSSSCCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC------
T ss_pred cccCCCEEEECCCCCEeccEEEEeccc-cccc-c--c-cccccccccceeeEEEEEEEEcCCcceEEEEEEECCCccccc
Confidence 368999999999999 99998751 1000 0 0 00000 000012357889899999999999998654321100
Q ss_pred ccceeeecccc-CCCceEEccCeEEEEEECCCCcEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-
Q 002162 530 GMRTVYKSQIR-QNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY- 607 (958)
Q Consensus 530 ~~s~~~~~~~~-~~~~~~ieN~~~~v~~~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~~- 607 (958)
.. .. ..+...|||++|+|+|| .+|.| +|+||++|+++. +|.+|.+. ++.||||+|+|++..
T Consensus 543 ----~~---~~~~~~~~~leN~~~~v~~d-~~G~l-si~dk~~gr~~~---~~~~y~d~-----~d~~day~f~p~~~~~ 605 (923)
T 2wyh_A 543 ----TV---SLYDDSNQCLENGFLKVMIQ-TDGRL-TITDKQSGLIYQ---DLLRFEDC-----GDIGNEYISRQPNHDQ 605 (923)
T ss_dssp ----CC---CSEETTTTEEECSSEEEEEC-TTSCE-EEEETTTCCEEE---EESEEEEE-----ECCSCSSCCCCCTTCC
T ss_pred ----cc---ccccCCCceEecCeEEEEEe-CCCCE-EEEECCCCeEEE---EEEEEeec-----CCCCCeeEEEcCCCCc
Confidence 00 01 23457899999999999 57998 899999999986 78888754 678999999998654
Q ss_pred ccC-CCCCceEEEE-eCCceEEEEEEE-----------------------------cC-----eEEEEEEEecCCCceeE
Q 002162 608 PIE-PEGQLSFTIL-RGPLLDEVHQRI-----------------------------NP-----WIYQVTRVYKGKDHAEI 651 (958)
Q Consensus 608 ~~~-~~~~~~i~v~-~Gpl~~~v~~~~-----------------------------~s-----~i~q~irL~~~~~~ie~ 651 (958)
++. ......++++ +||++++|++.+ ++ +++|+++||+++++|||
T Consensus 606 ~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP~~~~~~L~~~~~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~~ie~ 685 (923)
T 2wyh_A 606 PFYADQGTIKLNIISNTAQVAELEIQQTFAIPISADKLLQAEMEAVIDITERQARRSQEKAELTLTTLIRMEKNNPRLQF 685 (923)
T ss_dssp CEEGGGSEEEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCSCEEE
T ss_pred eeeccCCCceEEEEEcCCCEEEEEEEEEecCCccchhhhccccccccchhhhhhcccccccceEEEEEEEEeCCCceEEE
Confidence 332 2234577775 599999999887 13 59999999999999999
Q ss_pred EEEEccccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceeccccccc-CcccccCCccccceeeccceeeeeeCceeE
Q 002162 652 EFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRK-DWNLEVNQPIAGNYYPVNLGIYMKDNSSEL 730 (958)
Q Consensus 652 e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~-~w~~~~~~pv~~nyYP~~s~~~I~D~~~~l 730 (958)
++.|++. +.+|+|+++|+|+|.++..+| | |||++++|+++.++ +|+. ++|||||++||+|+|.+.|+
T Consensus 686 ~~~vd~~----~~~~~l~v~fpt~i~s~~~~~-d-~~fg~i~R~~~~~~~~w~~------a~~~~p~~~~v~l~d~~~gv 753 (923)
T 2wyh_A 686 TTRFDNQ----MTNHRLRVLFPTHLKTDHHLA-D-SIFETVKRPNHPDATFWKN------PSNPQHQECFVSLFDGENGV 753 (923)
T ss_dssp EEEEEEC----CCSEEEEEEEECCCCCSEEEE-E-ETTEEEEEESSCCTTTCCC------SCCCEECSSEEEEECSSEEE
T ss_pred EEEECCc----cCCEEEEEEeccccCCCCEEE-e-cCceEEEccCCCCCCCccc------ccceEeeeeEEEEECCCCcE
Confidence 9999865 468999999999999976555 6 99999999998887 8874 79999999999999999999
Q ss_pred EEEecCCcccccc-CCCeEEEEEEeec--cCCCCcCccccccccccccccccCeEEEeEEEEeecCccchhh---hcccc
Q 002162 731 SILVDRSVGGSSI-ADGQLELMLHRRL--VADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK---WRRSF 804 (958)
Q Consensus 731 tvl~dr~~G~sS~-~~G~iElml~Rr~--~~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~r~~ 804 (958)
||+|||++|++++ .+|+|+|||||++ +.| +|+ +|..|.++ +|+|.+.+.-...... ..++.
T Consensus 754 avlnd~~~g~~~~~~~~~i~LtLlRs~~~lg~--~G~-~p~p~a~~----------~G~h~f~yal~~~~g~~~~~~~~~ 820 (923)
T 2wyh_A 754 TIGNYGLNEYEILPDTNTIAITLLRSVGEMGD--WGY-FPTPEAQC----------LGKHSLSYSFESITKQTQFASYWR 820 (923)
T ss_dssp EEEESSCCEEEEETTTTEEEEEEEEECSBCCT--TSC-CBCGGGGC----------CEEEEEEEEEEEEETTTHHHHHHH
T ss_pred EEEeCCccceEEecCCCeEEEEEecccccccc--CCc-ccCchhHh----------ceEEEEEEEEcccCCchhHHHHHH
Confidence 9999999999877 4899999999999 444 787 67666542 2344444332221111 12467
Q ss_pred chhhccCceeeeeccCCCccccccccccccCcccccCCCcceEEEeeecCC-CcEEEEEeeccccccCCCCceeeeeecc
Q 002162 805 GQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDS-GKILLRLAHLYEIEEDTDLSVMSSVELK 883 (958)
Q Consensus 805 ~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~i~l~tl~~~~~-~~~llRl~~~~~~~~~~~~s~~~~v~l~ 883 (958)
+++++.|++++....... .....++.+. .-|++|+|.+||++++ +.++|||.|..... . +.+.+
T Consensus 821 a~~~~~Pl~~~~~~~~~~----~~~~~~s~l~---~~~~~v~l~alK~aed~~~~ilRl~n~~g~~-~------~~l~~- 885 (923)
T 2wyh_A 821 AQEGQVPVITTQTNQHEG----TLAAEYSYLT---GTNDQVALTAFKRRLADNALITRSYNLSNDK-T------CDFSL- 885 (923)
T ss_dssp HHHTTSCCEEEECCSCCC----SBCSEEESCB---CCCTTEEEEEEEECTTTCCEEEEEEESCSSC-C------EECCC-
T ss_pred HHHHhCCHhheecCcccC----cCCcccccee---cCCCCEEEEEEEEccCCCcEEEEEecCCCCc-c------eEEEe-
Confidence 899999998765432111 1112233332 2378999999999986 48999988765321 1 22222
Q ss_pred ccCCCCccceEEeccccccchhhhhhccceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEEEEEEe
Q 002162 884 KVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFY 955 (958)
Q Consensus 884 ~lf~~~~~~~i~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P~eIrTf~i~~~ 955 (958)
.+.+..+.+++|.+.. ..+ . . . ++|.|.||+||+|+++
T Consensus 886 ----~~~~~~~~~~~llE~~-~~~-----------------------~--~---~-~~l~p~ei~T~~l~~~ 923 (923)
T 2wyh_A 886 ----SLPNYNAKVTNLLEKD-SKQ-----------------------S--T---P-SQLGKAEILTLAWKKQ 923 (923)
T ss_dssp ----BCTTEEEEEECTTCCB-CSC-----------------------C--C---C-SEECTTCEEEEEEEEC
T ss_pred ----ccccceEEEeeccCcc-ccc-----------------------c--c---c-ceEcCcceEEEEEEeC
Confidence 2355678999998641 100 0 0 1 6799999999999874
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=9.2e-113 Score=1061.07 Aligned_cols=781 Identities=15% Similarity=0.159 Sum_probs=573.1
Q ss_pred chhHhhHHHHHHHHHHhCCCCeEEEee-HHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHH
Q 002162 15 VACVQNVLDSLIPALVADKNRKFIYVE-QAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQT 93 (958)
Q Consensus 15 ~~~v~~il~~vl~~L~~~p~~kF~~~E-~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql 93 (958)
..++.++|++||++|++||+++|++.| +.++.+||.+++|+.+++||+||++|||| |||||||+||+++||||+||||
T Consensus 29 ~~~~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~~~~~vk~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~ 107 (899)
T 3lvt_A 29 HMRLIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPEKKEAVKKAVQAGKLK-IGPFYILQDDFLISSESNVRNM 107 (899)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHHHHHHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEcccHHHHHHHHhhCHHHHHHHHHHHHcCCEE-ECchhccccccCCCHHHHHHHH
Confidence 468999999999999999999999964 66777899999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeecC----hHhHHhh--cccCceEEEEeeCCCCCC
Q 002162 94 TLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARID----YQDRAKR--INEKTLEVVWRASKSLGS 167 (958)
Q Consensus 94 ~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~----~~~k~~~--~~~~~~eF~W~g~d~~~~ 167 (958)
++||+|+++ ||++|++||+|||||||++||||| ++|||++++|+|++ |+.+... -....++|+|+|+|
T Consensus 108 ~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~-~~~Gi~~~~~~Rg~~~~~~~~~k~~~~~~~p~~~F~W~g~d---- 181 (899)
T 3lvt_A 108 LIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMM-QLANLPAAAFGRGVKPIGFDNQVLESDYSSQYSEMWWEGPD---- 181 (899)
T ss_dssp HHHHHHHHH-HTCCCCCEEESCCCT---THHHHH-HTTTCCEEEEC---------------------CEEEEECTT----
T ss_pred HHHHHHHHH-cCCCCceeEeCCCCCCchHHHHHH-HHcCCCeEEEecccccccccccccccccCCCCceEEEECCC----
Confidence 999999999 999999999999999999999999 99999999999986 4432111 01245789999999
Q ss_pred CCceeEEeCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhH
Q 002162 168 SAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHT 247 (958)
Q Consensus 168 gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~ 247 (958)
||+||||++|++|+.+ .. . | ...+|++.+++.+++.++ +.+.++++|+|+|+|+. .
T Consensus 182 Gs~vlt~~~~~~Y~~g-~~-----~----p------~~~~~~~~~~~~~~~~~~---~~~~t~~il~~~G~D~~-----p 237 (899)
T 3lvt_A 182 QTKIFGLLFANWYSNG-NE-----I----P------SEKEAAIAFWKQKLADVE---RYASTNHLLMMNGVDHQ-----P 237 (899)
T ss_dssp SCEEEEEECCCC-----CC-----S----C------SSHHHHHHHHHHHHHHHH---HHCSSSEEEEEEEEC--------
T ss_pred CCeEEEEECCCcCcCc-cC-----C----C------CcHHHHHHHHHHHHHHHH---hhcCCCeEEEeecCCCC-----c
Confidence 9999999999999765 11 0 1 123566666666655443 35889999999999963 4
Q ss_pred HHHHHHHHHHHHhc-CCCeEEEEcChhhHHHHHHhcC-CCCCcccCCCc-cCCcCCCCcee-eeeccchhhhHHHHHHHH
Q 002162 248 WFRQMDKFIHYVNQ-DGRVNALYSTPSMYIDAKYAAN-ESWPLKTDDFF-PYADRENAYWT-GYFTSRPALKGYVRTMSA 323 (958)
Q Consensus 248 ~~~~~~~li~~iN~-~~~~~i~~sT~~~Yf~a~~~~~-~~~p~~~gDf~-py~~~~~~yWt-G~yTSr~~~K~~~R~~e~ 323 (958)
++++|+++|+++|+ .+.++++|||+++||++++++. ..||+++|||+ +|+++ .||+ |||||||.+|++||++|+
T Consensus 238 ~~~~l~~~i~~~n~~~p~~~~~~st~~~yf~~l~~~~~~~lp~~~GEl~~~~~~G--~yt~~~~~sSr~~~K~~nR~~E~ 315 (899)
T 3lvt_A 238 VQRDITKAIALANELFPEYEFIHSNFDDYLKAVQEELPEDLGTVTGELTSQETDG--WYTLANTSSARVYLKQWNTKVQR 315 (899)
T ss_dssp ---CHHHHHHHHHHHCSSEEEEECCHHHHHHHHHHTCC--CCEEECCC-------------CGGGGBTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCceEEEcCHHHHHHHHHHhccccCCcccccccccccCc--eEEECCccccHHHHHHHHHHHHH
Confidence 67899999999997 4789999999999999999876 68999999986 78773 4665 778899999999999999
Q ss_pred HHH-HHHHHHhhhcc---ccCCCchHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 002162 324 YYL-AARQLEFFKGR---NEVGLSTDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSK 399 (958)
Q Consensus 324 ~L~-~aE~l~~la~~---~~~~~~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~~~~ 399 (958)
+|+ +||+|+++|.. .|+...++++|++|+++||||+|||||+++|++||.+||.++.+.++.+++.+++.|+....
T Consensus 316 ~L~~~aE~l~~la~~~g~~yp~~~l~~~Wk~ll~~Q~HD~i~Gtsi~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~ 395 (899)
T 3lvt_A 316 QLENIAEPLAAMAYEVTGDYPHDQFDYAWKTLLQNHPHDSICGCSVDEVHRGMMTRFENANDVGHFLADEATRQLTEAID 395 (899)
T ss_dssp HHHTTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCSTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHhccCCCCccCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999 69999998743 46667799999999999999999999999999999999999999999999999999986431
Q ss_pred CCCCCCCccccccCCcccccCCCCccccCCCCceEEEEEcCCCceEeEEEEEEEeC----------------------Cc
Q 002162 400 NGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKREDIIRIPVIN----------------------EN 457 (958)
Q Consensus 400 ~~~~~~~~~~~~~~~ln~s~c~~~~~~~~~~~~~~v~v~Npl~~~r~~~V~i~v~~----------------------~~ 457 (958)
. |.. + .+...++|||||+|+|+++|++++.. +.
T Consensus 396 ~-------------------~~~-----~-~~~~~v~vfN~l~~~r~~~V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (899)
T 3lvt_A 396 T-------------------SVF-----P-EKAHPFVLFNTSGYQKTEVVTVEVEIERLPFYTGKPEDLYHELKQKATPD 450 (899)
T ss_dssp C-------------------TTS-----C-TTCEEEEEEECSSSCEEEEEEEEEEEEEEEGGGSCHHHHHHHHHHSCCCC
T ss_pred c-------------------ccC-----C-CCCCEEEEEeCCCceeeeEEEEEEEccccccccccchhhhhhhccccCCc
Confidence 0 000 0 13568999999999999999999874 57
Q ss_pred EEEEcCCCCEEEEEEeeccccccc-ccccccccccCCCCCCCCcEEEEEEE-eeCCCceEEEEEEeCCccCCccccceee
Q 002162 458 VTVKDSKGKVIESQLLPLLKDSMS-LRNSYSTAYLGKSTNVTPSYWLAFSA-SVPPLGFNTYIISSAKQAASHSGMRTVY 535 (958)
Q Consensus 458 ~~v~d~~g~~v~~Qi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~f~~-~vP~lG~~~~~i~~~~~~~~~~~~s~~~ 535 (958)
+.|.|.+|++||+|+++....... +..... +.+.....+.|.|.+ +||||||++|.|.......... .+
T Consensus 451 ~~v~d~~G~~v~~qv~~~~~~~~~~l~~~~~-----~~~~~~~~~~l~f~a~~vPalGy~~~~i~~~~~~~~~~---~~- 521 (899)
T 3lvt_A 451 YQVIDPTGKAVASRIVKEDVRFGYDLPKDAF-----RQPYMAKYLTVELSVKEMAPFSWDSFALIQGETKAFEG---SL- 521 (899)
T ss_dssp EEEECSSSCEECCEEEEEEEEEEECCC----------CEEEEEEEEEEEEEEEECTTEEEEEEEEESCCCCCCS---CC-
T ss_pred eEEECCCCCEEeEEEeecccccccccccccc-----ccccccceEEEEEEecCCCCCCCEEEEEEecCcccccc---cc-
Confidence 999999999999999987542110 000000 000011235788877 9999999999998755422110 00
Q ss_pred eccccCCCceEEccCeEEEEEECCCCcEEEEEecccceeeEEEEEEEEeecCCCCCCCCCCcceEEccCCCC-ccCCC-C
Q 002162 536 KSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGSKDLQPSGAYIFRPNGTY-PIEPE-G 613 (958)
Q Consensus 536 ~~~~~~~~~~~ieN~~~~v~~~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~~~~~~sgAY~F~P~~~~-~~~~~-~ 613 (958)
....+...|||++|+|+|| .+|.| +|+||++|+++. ++.+|.+. ++.+|+|+|+|...+ ++... .
T Consensus 522 ---~~~~~~~~leN~~~~v~~d-~~G~l-sl~Dk~~gre~~---~~~~~~d~-----gd~g~~Y~~~p~~~d~~~~~~~~ 588 (899)
T 3lvt_A 522 ---LAQPATNEMENEFIQVKIE-NNGSL-TIADKKTGETFS---KLLTFEDT-----GDIGNEYIFFKPTEDQGITTENV 588 (899)
T ss_dssp ---SEETTTTEEECSSEEEEEC-TTSCE-EEEETTTCCEEE---EETEEEEE-----ECCSBTTBCCCCTTCCCEESTTC
T ss_pred ---cccccCcEEecCcEEEEEc-CCCcE-EEEECCCCeEEE---EEEEEecC-----CCCCCceeecCCcCCceeeccCC
Confidence 0111467899999999999 49999 799999999886 57777643 568999999997653 44333 2
Q ss_pred CceEEE-EeCCceEEEEEEEc----------------------------C------eEEEEEEEecCCCceeEEEEEccc
Q 002162 614 QLSFTI-LRGPLLDEVHQRIN----------------------------P------WIYQVTRVYKGKDHAEIEFTVGPI 658 (958)
Q Consensus 614 ~~~i~v-~~Gpl~~~v~~~~~----------------------------s------~i~q~irL~~~~~~ie~e~~v~~i 658 (958)
...+++ ++||++++|++++. | +++|+|+||+++++|||+++|++.
T Consensus 589 ~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L~~~~~~id~~~~Vdw~ 668 (899)
T 3lvt_A 589 TAEITNKENSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESNQLFFETTINNQ 668 (899)
T ss_dssp CCEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCCCEEEEEEEEEC
T ss_pred CceEEEEEcCCCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccccccceEEEEEEEEeCCCCEEEEEEEECCC
Confidence 357776 68999999987642 3 799999999999999999999653
Q ss_pred cccCCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCcccccCCccccceeeccceeeeeeCceeEEEEecCCc
Q 002162 659 PIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSV 738 (958)
Q Consensus 659 ~~~~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~ 738 (958)
+.+|+|++.|+++|.++.++|++ +|++++|+++.+++|+ .++|+||+++||+|+|.+.|+||+|||+|
T Consensus 669 ----~~~~~Lrv~Fp~~i~s~~~~~d~--~fG~i~Rpt~~~t~We------~a~~e~~~~~~vdlsd~~~Gvavlnd~~~ 736 (899)
T 3lvt_A 669 ----IKDHRLRVLFPTGMVTETHEADS--IYEVVTRPNQVSDTWE------NPTNPQHQQAFVNVHDQNKGVTIFNEGLN 736 (899)
T ss_dssp ----CCSEEEEEEECCSCCCSEEEEEC--SSSEEEEEC-------------CCCCCEECSSEEEEECSSCEEEEEESSCC
T ss_pred ----cCCEEEEEECCCCCCcCceEEec--cceEEECCCCCCcccc------CCCcceeeeeEEEEecCCceEEEEeCCCc
Confidence 67999999999999998888875 5669999999999997 36899999999999999999999999999
Q ss_pred cccccCCCeEEEEEEeecc-------CCCCcCccccccccccccccccCeEEEeEEEEeecCcc---chhhhccccchhh
Q 002162 739 GGSSIADGQLELMLHRRLV-------ADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVG---EAAKWRRSFGQEI 808 (958)
Q Consensus 739 G~sS~~~G~iElml~Rr~~-------~dD~rGv~e~l~e~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~r~~~~~l 808 (958)
|++++.+|.|+|||+|+.. ++|+. . +|.| .++|.+.+.+.. ..+.. -+.++++
T Consensus 737 gy~v~~d~~i~LTLlRs~g~lG~~g~~p~Pd--------a-----~~~G---~h~F~yal~ph~g~~~~~~~-~~~a~~~ 799 (899)
T 3lvt_A 737 EYEVLADGTIAVTLIRCVGELGDWGYFATPE--------A-----QCQG---EYTFKYGLSLHGKPEERFAT-YQQAYSA 799 (899)
T ss_dssp EEEECTTCCEEEEEEEECSBCCTTSCCBCGG--------G-----GCCE---EEEEEEEEEEESSGGGHHHH-HHHHHHH
T ss_pred ceeEcCCCEEEEEEecccCcccccCCcCCcc--------h-----hhhC---ceEEEEEEEecCCCchhhHH-HHHHHHh
Confidence 9987778999999999973 33321 1 1333 334444443222 12222 2468899
Q ss_pred ccCceeeeeccCCCccccccccccccCcccccCCCcceEEEeeecCC-CcEEEEEeeccccccCCCCceeeeeeccccCC
Q 002162 809 YSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDS-GKILLRLAHLYEIEEDTDLSVMSSVELKKVFP 887 (958)
Q Consensus 809 ~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~~i~l~tl~~~~~-~~~llRl~~~~~~~~~~~~s~~~~v~l~~lf~ 887 (958)
+.|+.++-...... .....++.+. .-++++.+-++|..++ +.++||+.+.. +.. +++.+.
T Consensus 800 n~pl~~~~~~~~~~----~l~~~~s~~~---~~~~~v~lsavK~aEd~~~~IlRlye~~--g~~------~~l~~~---- 860 (899)
T 3lvt_A 800 QIPFTAATTARHEG----KLAPNHVYLT---TAEGPIGWTAVKRQEQTNHLVVRGFNLT--AQN------IPCELH---- 860 (899)
T ss_dssp TSCCEEEECCSCCC----SBCSEEESEE---CCCSSEEEEEEEECTTTCCEEEEEEECS--SSC------BCCCCE----
T ss_pred cCCcceeecccccC----cCCCccccee---eCCCCEEEEEEEeeecCCcEEEEEEcCC--CCc------EEEEEc----
Confidence 99997653321110 0011122221 2356999999999976 47999954422 222 222221
Q ss_pred CCc-cceEEeccccccchhhhhhccceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEEEE
Q 002162 888 KKK-ISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVI 952 (958)
Q Consensus 888 ~~~-~~~i~E~sLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P~eIrTf~i 952 (958)
+. +..+.+|+|.+.. .. + ...+.+.|+|.||+||+|
T Consensus 861 -~~~~~~~~~~nllE~~-~~------------~---------------~~~~~~~~~pfeI~T~~~ 897 (899)
T 3lvt_A 861 -KETQPATCLTNVLEEP-LT------------P---------------AIEVDAPLRPFEIRTWRF 897 (899)
T ss_dssp -ETTEECCEEECTTSCB-CS------------S---------------CCCTTSCBCTTCEEEEEE
T ss_pred -cCcccceEEecccccc-cc------------C---------------CcceeeeEcCceEEEEEE
Confidence 12 4567889988641 10 0 002346799999999998
No 4
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=100.00 E-value=2.4e-65 Score=553.64 Aligned_cols=259 Identities=45% Similarity=0.805 Sum_probs=244.6
Q ss_pred EeeccccccchhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCC
Q 002162 6 MINGMVYMQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPH 85 (958)
Q Consensus 6 ~~g~~~~~~~~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~ 85 (958)
++|+++.|+.++|+++|++||++|+++|++||+|+|+++|.+||++++|+.+++||+||++||||||||||||+|||++|
T Consensus 36 ~~~~~~~i~~~~~~~~~~~vl~~l~~~p~~~F~~~e~~~~~~w~~~~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~ 115 (298)
T 1o7d_A 36 FYGIYNNIQPAGVQYILDSVISSLLANPTRRFIYVEIAFFSRWWRQQTNATQKIVRELVRQGRLEFANGGWVMNDEATTH 115 (298)
T ss_dssp HHTCCTTTCCCCHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHTSCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCC
T ss_pred hccccchhHHHHHHHHHHHHHHHHHHCCCCeEEEecchHhHHHHHhcCHHHHHHHHHHHHCCCEEEECceeeccccCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCC--CceeeecCCCCCChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCC
Q 002162 86 YIDMIDQTTLGHRYIKEQFNVT--PRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASK 163 (958)
Q Consensus 86 ~es~Irql~~G~~~l~~~fG~~--p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d 163 (958)
+||+||||++||+|++++||+. |++||+|||||||+++|+|| +++||++++++|++|++++.+...+.+||+|+|++
T Consensus 116 ~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s~~lP~il-~~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~ 194 (298)
T 1o7d_A 116 YGAIIDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQASLF-AQMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRAST 194 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCCHHHHHHH-HHHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCceeEeCCCCCccHHHHHHH-HHcCCCeEEEEecccccccccccCCCceEEEECCC
Confidence 9999999999999999999997 99999999999999999999 99999999999999999988776778999999997
Q ss_pred CCC-CCCceeEEeCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCC
Q 002162 164 SLG-SSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKY 242 (958)
Q Consensus 164 ~~~-~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y 242 (958)
+++ +||+||||++|.+|++| .+||||..|.++|++++|.++++||+++++.|+++++++++.|+|++||+|+|+||+|
T Consensus 195 ~~~~dgs~i~t~~~~~~Y~~~-~g~~fd~~~~~~p~~~~~~~~~~nv~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~ 273 (298)
T 1o7d_A 195 SLKPPTADLFTSVLPNMYNPP-EGLCWDMLCADKPVVEDTRSPEYNAKELVRYFLKLATDQGKLYRTKHTVMTMGSDFQY 273 (298)
T ss_dssp SSCTTTTEEEEEECSSTTSCC-TTCCCSTTCCCCCCCCCTTSTTCCHHHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCC
T ss_pred CCCCCCCeEEEEEeCCCCCCC-CCcccccccCCcCccCCccchHHHHHHHHHHHHHHHHHHHhhcCCCcEEeccCCCCCc
Confidence 665 69999999999999998 8999999998889888888999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhcCCCeE
Q 002162 243 QYAHTWFRQMDKFIHYVNQDGRVN 266 (958)
Q Consensus 243 ~~a~~~~~~~~~li~~iN~~~~~~ 266 (958)
.+|..||.||++||+++|++..++
T Consensus 274 ~~a~~~f~n~~~li~~iN~~~~~~ 297 (298)
T 1o7d_A 274 ENANTWFKNLDKLIQLVNAQQRAN 297 (298)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----
T ss_pred cchhHHHHHHHHHHHHHhhcCccC
Confidence 999999999999999999876543
No 5
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=100.00 E-value=5.2e-64 Score=531.54 Aligned_cols=271 Identities=38% Similarity=0.664 Sum_probs=250.3
Q ss_pred ceEEccCeEEEEEECCCCcEEEEEecccceeeEEEEEEEEeecCCCC-CCCCCCcceEEccCCCCccCCCCCceEEEEeC
Q 002162 544 TIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDGS-KDLQPSGAYIFRPNGTYPIEPEGQLSFTILRG 622 (958)
Q Consensus 544 ~~~ieN~~~~v~~~~~~G~i~si~dk~~g~~~~~~~~~~~Y~~~~g~-~~~~~sgAY~F~P~~~~~~~~~~~~~i~v~~G 622 (958)
.+.|+|++++|+||+.+|.|++|+++++|.+..+.++|.+|.+..|+ .+++.||||+|+|++.++.++.....+.|++|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred cEEEcCceEEEEECCCCCcEEEEEEcCCCeEEEEeEEEEEEecccCCCCCCCCCceEEecCCCCCCcccCCCcEEEEEEC
Confidence 46899999999999878999999999999999999999999987664 23678999999999886555555678899999
Q ss_pred CceEEEEEEEcCeEEEEEEEecCCCceeEEEEEccccccCCCCcEEEEEEEeeccCCCeEEEcCCcccceecccccccCc
Q 002162 623 PLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDW 702 (958)
Q Consensus 623 pl~~~v~~~~~s~i~q~irL~~~~~~ie~e~~v~~i~~~~~~~~el~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~~w 702 (958)
||+++|++.+++|++|++|||++..+||++++|+|||+.++.|+|+++||.|+|+|++.||||+||+||+||.+++|++|
T Consensus 82 ~lv~eV~~~~~~~~sq~~Rly~~~~~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~kR~~~~r~~~ 161 (282)
T 1o7d_D 82 SLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTW 161 (282)
T ss_dssp SSCEEEEEEEETTEEEEEEECTTCSSEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEEEEETTCCSSS
T ss_pred CEEEEEEEEECCcEEEEEEEecCCceEEEEEEEccccccCCCCcEEEEEEEeeeccCCeEEECCCCceeeEEEecccccc
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred ccccCCccccceeeccceeeeeeCceeEEEEecCCccccccCCCeEEEEEEeeccCCCCcCccccccccccccccccCeE
Q 002162 703 NLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLT 782 (958)
Q Consensus 703 ~~~~~~pv~~nyYP~~s~~~I~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~~~dD~rGv~e~l~e~~~~~~~~~~~~ 782 (958)
+.+.++|+++|||||+++|+|+|++.||+|++||++||||+++|+||||||||+++||+|||||||+|+ ++|++
T Consensus 162 ~~~~~~pv~gNYYPv~s~~~IqD~~~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~------~~gl~ 235 (282)
T 1o7d_D 162 KLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKE------GSGLW 235 (282)
T ss_dssp CCCCSCTTGGGCEEESSEEEEECSSEEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCC------GGGGS
T ss_pred ccccccCcccceeeeeeEEEEEcCCeEEEEEecccccccccCCCeEEEEEeeecccccccccccccccc------CCCeE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 26899
Q ss_pred EEeEEEEeecCccchhhhccccchhhccCceeeeeccC
Q 002162 783 IIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQD 820 (958)
Q Consensus 783 ~~~~~~l~~~~~~~~~~~~r~~~~~l~~p~~~~~~~~~ 820 (958)
++|+|||+|++...+...+|..++++.+||+++|+..+
T Consensus 236 v~g~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~fs~~~ 273 (282)
T 1o7d_D 236 VRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGG 273 (282)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHHHHSCCEEEEEEC-
T ss_pred EEEEEEEEEeCcccchhhhhHHHHhhhCchhhheecCC
Confidence 99999999999887777788899999999999998754
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=99.97 E-value=3.6e-30 Score=255.48 Aligned_cols=150 Identities=41% Similarity=0.697 Sum_probs=132.5
Q ss_pred chHHHHHHHHhhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCccccccCCcccccCCC
Q 002162 343 STDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPP 422 (958)
Q Consensus 343 ~~~~lw~~l~l~QhHD~ItGTs~~~V~~Dy~~rl~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~ln~s~c~~ 422 (958)
.++++||+|+++||||+||||++++|++||.+||.++++.++.+++.+++.|+... .+|..|.++|++.||.
T Consensus 2 ~L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~--------~~~~~~~~ln~~~~~~ 73 (159)
T 1o7d_C 2 DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLK--------EDFAFCRKLNISICPL 73 (159)
T ss_dssp CSHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------SCEECCTTGGGTCCHH
T ss_pred hHHHHHHHHhCcccCCcCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------cccccccccccccCcc
Confidence 47889999999999999999999999999999999999999999999999998532 2677899999999987
Q ss_pred CccccCCCCceEEEEEcCCCceEeEEEEEEEeCCcEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEE
Q 002162 423 SEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYW 502 (958)
Q Consensus 423 ~~~~~~~~~~~~v~v~Npl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (958)
++. ++...|+|||||+|+|+++|+++|+.+.+.|+|.+|++|++|+.+.+.. ..++
T Consensus 74 ~~~----~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~--------------------~~~~ 129 (159)
T 1o7d_C 74 TQT----AERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS--------------------DSQE 129 (159)
T ss_dssp HHH----CSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT--------------------TEEE
T ss_pred ccC----CccEEEEEECCCCceEeEEEEEEEcCCcEEEEcCCCCEeeeEEEeccCC--------------------CceE
Confidence 531 4557899999999999999999999999999999999999999987642 1257
Q ss_pred EEEEEeeCCCceEEEEEEeCCc
Q 002162 503 LAFSASVPPLGFNTYIISSAKQ 524 (958)
Q Consensus 503 l~f~~~vP~lG~~~~~i~~~~~ 524 (958)
|+|.++||||||++|.|.....
T Consensus 130 l~f~a~vP~lG~~ty~i~~~~~ 151 (159)
T 1o7d_C 130 LLFSALVPAVGFSIYSVSQMPN 151 (159)
T ss_dssp EEEEEEECTTEEEEEEEEECC-
T ss_pred EEEEeecCCceeEEEEEEECCC
Confidence 9999999999999999987544
No 7
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=99.92 E-value=1.5e-25 Score=209.34 Aligned_cols=118 Identities=34% Similarity=0.553 Sum_probs=97.4
Q ss_pred ccccCcccccCCCcceEEEeeecCCCcEEEEEeeccccccCC--CCceeeeeeccccCCCCccceEEeccccccchhhhh
Q 002162 831 TYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDT--DLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVM 908 (958)
Q Consensus 831 ~~~~l~~~~~lp~~i~l~tl~~~~~~~~llRl~~~~~~~~~~--~~s~~~~v~l~~lf~~~~~~~i~E~sLt~~~~~~~~ 908 (958)
+|+++. .+||+||||+||++|+++++||||+|+|++++|. .+|+|++|||++||.+++|.++.||+|+||++++++
T Consensus 4 ~~s~l~--~~LP~nvhLlTLe~~~~~~iLlRl~hl~e~~ed~~~~~s~pv~v~l~~lF~~~~i~~i~EttLtgn~~~~~~ 81 (126)
T 1o7d_E 4 QFSGLR--RELPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTLDLTNLFSAFTITNLRETTLAANQLLAYA 81 (126)
T ss_dssp EECSBS--SCCCTTCEEEEEEEEETTEEEEEEECCCCTTTTTTTTCSSCEEEECSSSBSSSEEEEEEEECTTSSSBGGGC
T ss_pred ccCccc--ccCCCcEeEEEEEEcCCCcEEEEEEeecccccCcccccCcceEEeHHHhhcccccceEEEEccccccccccc
Confidence 477775 3899999999999999999999999999999998 899999999999999999999999999999999997
Q ss_pred hccceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEEEEEEeec
Q 002162 909 EKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYSE 957 (958)
Q Consensus 909 ~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P~eIrTf~i~~~~~ 957 (958)
+||+|++++..... + .+++.+.+.|+|.|||||||+|+++.+
T Consensus 82 --~Rl~w~~~~~~~~~----~-~~~~~~~~~vtL~PmEIRTFii~~~~~ 123 (126)
T 1o7d_E 82 --SRLQWTTDTGPTPH----P-SPSRPVSATITLQPMEIRTFLASVQWE 123 (126)
T ss_dssp --CCCCCCBC-------------------CEEEECTTCEEEEEEEEEC-
T ss_pred --cccccccCCCCccc----c-cccCCCCceEEEcCccEEEEEEEEEec
Confidence 89999988744311 1 445556689999999999999999865
No 8
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=99.88 E-value=2.6e-23 Score=177.54 Aligned_cols=74 Identities=53% Similarity=0.894 Sum_probs=71.0
Q ss_pred CeEEEEcChhhHHHHHHhcCCCCCcccCCCccCCcCCCCceeeeeccchhhhHHHHHHHHHHHHHHHHHhhhcc
Q 002162 264 RVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR 337 (958)
Q Consensus 264 ~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~aE~l~~la~~ 337 (958)
.++++||||+|||+++++.+..||+++||||||++++++||||||||||.+|+++|++|+.|++||+|.++++.
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L~~la~~ 75 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKANLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALAGP 75 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTCCCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eEEEEeCCHHHHHHHHHHhCCCCcccCCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 48899999999999999988899999999999999999999999999999999999999999999999998754
No 9
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=99.69 E-value=2.8e-15 Score=179.00 Aligned_cols=123 Identities=15% Similarity=0.207 Sum_probs=115.1
Q ss_pred hhHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHH
Q 002162 16 ACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTL 95 (958)
Q Consensus 16 ~~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~ 95 (958)
..+.+.+..+++.|+++|++||...=...+..|+++.+|+..+++|+|+++||+|++||+|+.++..+++.|++++|+.+
T Consensus 25 ~a~~~~Y~pll~ll~~~~~~k~~~~~s~~ll~~l~~~~p~l~~~ik~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~ 104 (659)
T 1k1x_A 25 EAYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEENKPDYLDLLRSLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEM 104 (659)
T ss_dssp HHHHHTHHHHHHHHTTCTTCCEEEEECHHHHHHHHHHCHHHHHHHHHHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEccHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEccCcccccccCCCHHHHHHHHHH
Confidence 34777899999999999999999655677778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcEEEEeec
Q 002162 96 GHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARI 141 (958)
Q Consensus 96 G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri 141 (958)
|.++++ .||++|+..|+||. |+++.+|+|| +++||+++++..-
T Consensus 105 g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL-~~~Gi~y~~td~~ 147 (659)
T 1k1x_A 105 LKDYAR-KLGYDAKGVWLTER-VWQPELVKSL-REAGIEYVVVDDY 147 (659)
T ss_dssp HHHHHH-HTTCCCCEEECGGG-CBCTTHHHHH-HHTTCCEEEEEHH
T ss_pred HHHHHH-HcCCCCCEEECccc-ccChhHHHHH-HHcCCcEEEECch
Confidence 999999 99999999999999 5999999999 9999999999864
No 10
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=98.80 E-value=2.2e-08 Score=114.66 Aligned_cols=285 Identities=13% Similarity=0.089 Sum_probs=164.2
Q ss_pred HhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCC-CHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCCh------
Q 002162 49 WRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAP-HYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSA------ 121 (958)
Q Consensus 49 ~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~-~~es~Irql~~G~~~l~~~fG~~p~vgW~~D~FGhs~------ 121 (958)
|+...++.-+++|+|++.|++||++++|.-+-..+. .-|++..|+..|.+.+++.||.+|+..|+|.. |++.
T Consensus 137 ~~~~~~dii~~fr~L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~ 215 (540)
T 3p0b_A 137 FQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPWKP 215 (540)
T ss_dssp HHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEECC
T ss_pred HHHhhHHHHHHHHHHHHCCCEEEEcCCchhhHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECccc-ceeCcccccc
Confidence 455688999999999999999999999999999988 58999999999999999999999999999998 9998
Q ss_pred -----------hhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCC---------CCCCCceeEEe------
Q 002162 122 -----------VQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKS---------LGSSAQIMTGI------ 175 (958)
Q Consensus 122 -----------~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~---------~~~gs~i~th~------ 175 (958)
.+..+| +++||+++++.=-....-..++.-. +....+..+ .++|-.||.--
T Consensus 216 ~~~~~~~~~~~~l~~~L-~~~Gi~y~~vd~~~~~~~~~~p~yG--~~~~~p~~~~~~py~v~~~~~~i~vf~RD~~lS~~ 292 (540)
T 3p0b_A 216 PVEGPPEGVRPGVDELL-MRAGIRYTFVDAHLVQGGEPLSPYG--EAALGPVESQEATYHVHELESGLRVLARNPETTLQ 292 (540)
T ss_dssp SSSCSCCEEECCHHHHH-HHTTCCEEEECTHHHHCSSCCCC----------CCCCGGGGSEEECTTSCEEEEBCHHHHHH
T ss_pred ccccccccchhhHHHHH-HHcCCeEEEECchhhccCCCCCCCC--ccccccccccccceeeccCCCceEEEeCCHHHHhh
Confidence 999999 8999999998532210000000000 001211110 01233333210
Q ss_pred ---CCCCCCCCC-----------CCCccccCCCC-CCccCCcccccCC-------hHHHHHHHHHHHHHhhcccCCCeEE
Q 002162 176 ---SPKNYEPPS-----------DNFYFEVGDTS-PIVQDDMNLFDYN-------VPERVNDFVSAAIAQANITRTNHIM 233 (958)
Q Consensus 176 ---~~~~Y~~p~-----------~~f~f~~~~~~-~~~~~~~~~~~~n-------v~~~~~~~~~~~~~~~~~~~t~~il 233 (958)
...+|-+.+ .||.|-..... .|-. .-..|+ +++.|+.|+...+++......+.|.
T Consensus 293 VWS~~~GYPGd~~YReF~rd~~~tGfky~rit~~~~~l~---~K~pYdp~~A~~~~~~hA~~Fv~~l~~~~~~~~~~lvv 369 (540)
T 3p0b_A 293 VWSADYGYPGEGLYREFHRKDPLSGLHHWRVTHRKADLA---EKAPYDPEAAFAKTEEHARHFVGLLERLAGRHPEGVIL 369 (540)
T ss_dssp HHCTTTSGGGSTTSBCSSCCCTTTCCCCBBCCSTTCCGG---GCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred ccccccCCCCChhHhhhccccccccceeeccCCccCCcc---ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 001232111 13332221110 0000 001233 3345788988877665555557777
Q ss_pred EEecCC---CCCcchhHHHHHHHHHHHHHhcCCCeEEEEcChhhHHHHHHhcCCCCCcccCCCccCC-cCCCCceeeeec
Q 002162 234 WTMGTD---FKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYA-DRENAYWTGYFT 309 (958)
Q Consensus 234 ~~~G~D---f~y~~a~~~~~~~~~li~~iN~~~~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDf~py~-~~~~~yWtG~yT 309 (958)
+++-.. +.+..+. .-++.+++.+.+ ...++..||++|.+....... ++. +- .. .+.+..|.|--.
T Consensus 370 ~~~D~ElfGHww~eG~---~fL~~l~r~l~~--~~~i~~~T~se~L~~~~~~~~-~~~--sS---Wg~~g~~~~Wlg~~~ 438 (540)
T 3p0b_A 370 SPYDAELFGHWWYEGV---AWLEAVLRLLAQ--NPKVRPVTAREAVQGPAVRTA-LPE--GS---WGRGGDHRVWLNEKT 438 (540)
T ss_dssp EEEEGGGBTTTBTTHH---HHHHHHHHHHTT--CSSEEECCHHHHTCSCEEECC-CCS--BC---SSGGGSSTTTSSGGG
T ss_pred EEechhhcccCccHHH---HHHHHHHHHHhh--cCCeEEECHHHHHHhCCCCCC-CCC--CC---CCCCCCcCccCCCHH
Confidence 775321 2233333 344566666532 256899999999865332222 221 10 11 134567777322
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhcc-ccCCCchHHHHHHHHhhhcccc
Q 002162 310 SRPALKGYVRTMSAYYLAARQLEFFKGR-NEVGLSTDSLADALALVQHHDA 359 (958)
Q Consensus 310 Sr~~~K~~~R~~e~~L~~aE~l~~la~~-~~~~~~~~~lw~~l~l~QhHD~ 359 (958)
. +.-...-++.|.+..++.. ......++++++.|++.|-=|-
T Consensus 439 ~--------w~~~~l~~a~~~m~~~~~~~~~~~r~l~Qa~RELLlAesSDW 481 (540)
T 3p0b_A 439 L--------DYWEKVYRAEGAMREAARRGVLPEGVLRQAMRELLLLEASDW 481 (540)
T ss_dssp H--------HHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTBTHH
T ss_pred H--------HHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHhCcc
Confidence 2 1111122233334333311 0112357889999999999984
No 11
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=98.76 E-value=6e-08 Score=111.52 Aligned_cols=91 Identities=15% Similarity=0.287 Sum_probs=84.5
Q ss_pred HHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCC-HHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCCh-----
Q 002162 48 WWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPH-YIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSA----- 121 (958)
Q Consensus 48 W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~-~es~Irql~~G~~~l~~~fG~~p~vgW~~D~FGhs~----- 121 (958)
-|++..++.-.++|+|++.|++||++++|.-+-..+.. .|++..|+..|.+.+++.||.+|+..|+|.. +++.
T Consensus 115 ~~~~~~~dii~~fr~L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~ 193 (562)
T 3n98_A 115 YWKAINGDIIGKLRELQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFGMKPKGIWLPEC-AYRPAGEWE 193 (562)
T ss_dssp HHHHTTTCHHHHHHHHHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCSBEECGGG-CBCCSEEEE
T ss_pred HHHHhhhHHHHHHHHHHHCCCEEEEcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCCCCCEEECccc-ceeCccccc
Confidence 34556889999999999999999999999999998886 8999999999999999999999999999999 9998
Q ss_pred ----------hhHHHHHhhcCCcEEEEee
Q 002162 122 ----------VQAYLLSAEVGFDFLFFAR 140 (958)
Q Consensus 122 ----------~~p~ll~~~~G~~~~~~~R 140 (958)
.+..+| +++||+++++.=
T Consensus 194 ~~~~~~~~~~~i~~~L-~~~Gi~y~~vd~ 221 (562)
T 3n98_A 194 LPGGRKVKRQGIEKFL-EEFGLRYFFVES 221 (562)
T ss_dssp CGGGCEEEECCHHHHH-HTTTCCEEEECH
T ss_pred cccccccchhhHHHHH-HHcCCeEEEECc
Confidence 999999 899999999853
No 12
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=98.60 E-value=5e-06 Score=96.83 Aligned_cols=81 Identities=17% Similarity=0.209 Sum_probs=75.0
Q ss_pred HHHHHHHhCCCeEEEcceeeecccCCCC--HHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcCCcE
Q 002162 58 NVVKQLVNSGQLELINGGMCMHDEAAPH--YIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDF 135 (958)
Q Consensus 58 ~~vk~LV~~GrlE~vgGgwv~~Dea~~~--~es~Irql~~G~~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~~ 135 (958)
+.+|+|++.|++|+++++|.-+=-.+.. .++...|+..|.+.+++.||.+|+..|+|-. +++..+..+| +++||++
T Consensus 126 ~~~r~L~~~G~vEll~~~y~H~ilPLl~d~~ed~~~QI~~g~~~~~~~FG~~P~G~WlpE~-a~~~~l~~~l-~~~Gi~y 203 (528)
T 2b5d_X 126 EGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVVNAQITVGVKNYEKHMKKHPRGIWLAEC-GYYQGLDLYL-AQNNVEY 203 (528)
T ss_dssp HHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHHHHHHHHHHHHHHHHHSSCCSEEECGGG-CBCTTHHHHH-HHTTCCE
T ss_pred HHHHHHHHCCCEEEEcCchhhHHHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECchh-ccChhHHHHH-HHcCCeE
Confidence 6789999999999999999988776655 7999999999999999999999999999987 9999999999 9999999
Q ss_pred EEEee
Q 002162 136 LFFAR 140 (958)
Q Consensus 136 ~~~~R 140 (958)
+++.=
T Consensus 204 ~i~d~ 208 (528)
T 2b5d_X 204 FFVDS 208 (528)
T ss_dssp EEECT
T ss_pred EEECc
Confidence 99864
No 13
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=95.44 E-value=0.47 Score=50.98 Aligned_cols=233 Identities=13% Similarity=0.075 Sum_probs=135.5
Q ss_pred hhHHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHH
Q 002162 19 QNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 97 (958)
Q Consensus 19 ~~il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~ 97 (958)
..-+..+++.|+++.= .+|..... .+ +..| +.+|+++++| .||.+=||.-.+-..-+.+.+.++|..+.
T Consensus 61 ~~~~~rll~ll~~~~v~aTfFv~g~-~~-----~~~p---~~v~~~~~~G-hEIg~H~~~H~~~~~~s~~~~~~ei~~~~ 130 (300)
T 3rxz_A 61 LVGVPRLLGILDEFNVPGTFFVPGY-TA-----HRHP---EPIRSIARAG-HEIAHHGYLHESLVGADEDTERKILTRGI 130 (300)
T ss_dssp HTHHHHHHHHHHHTTCCEEEEECHH-HH-----HHSH---HHHHHHHHTT-CEEEECCSSCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEHH-HH-----hhCH---HHHHHHHHcC-CEEEecCCCCcccccCCHHHHHHHHHHHH
Confidence 4567788999998853 35555422 22 3344 6789999999 79988899888888889999999999999
Q ss_pred HHHHHHcCCCCceeeecCCCC-CChhhHHHHHhhcCCcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEEeC
Q 002162 98 RYIKEQFNVTPRIGWQIDPFG-HSAVQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGIS 176 (958)
Q Consensus 98 ~~l~~~fG~~p~vgW~~D~FG-hs~~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~ 176 (958)
+.|++.+|..|+ +|-+ |+| ++..+..++ +++||.+..-.+.+. ..|+-+. + +..++ .+
T Consensus 131 ~~l~~~~G~~p~-~fr~-P~g~~~~~~~~~l-~e~G~~ydss~~~~~-----------~Py~~~~-~----~~~l~--~i 189 (300)
T 3rxz_A 131 EALEEVAGVHPV-GYRA-PMWEMNWHTPKLL-AEFGFLYDSTLMDSD-----------HPYELAV-G----DGSLV--EL 189 (300)
T ss_dssp HHHHHHHSCCCC-EECC-GGGCCCTTHHHHH-HHTTCSEECCCCSCS-----------SCEEBCC-T----TSCCE--EC
T ss_pred HHHHHHhCCCCc-EEEC-CCCCCCHHHHHHH-HHcCCEEEeeccCCC-----------CceEeec-C----CCCeE--EE
Confidence 999999998876 3443 444 467889999 899999876555431 1122111 1 22232 23
Q ss_pred CCCCCCCC-CCCccc-cCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhHHHHHHHH
Q 002162 177 PKNYEPPS-DNFYFE-VGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDK 254 (958)
Q Consensus 177 ~~~Y~~p~-~~f~f~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~~~~~~~ 254 (958)
|.++..-+ ..|.+. ....+. ...+.++..+.+.+.+... +..+. ++.++..............+++
T Consensus 190 P~~~~~~D~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~fd~~---~~~g~-~~~i~~H~~~~g~p~~~~~l~~ 257 (300)
T 3rxz_A 190 PVSWALDDWQQYCFVPDFSGTG--------LIETPAKAIELWRAELNAM---RDIGG-AWVLTNHPFLSGRPGRAAALRE 257 (300)
T ss_dssp CCCGGGBSHHHHCCBTTTBCSS--------CCCCHHHHHHHHHHHHHHH---HHHTC-EEEEEECHHHHTSHHHHHHHHH
T ss_pred eeeeecCCcHhhhcccccccCC--------CCCCHHHHHHHHHHHHHHH---HHcCC-eEEEEEChhhcCCHHHHHHHHH
Confidence 43321110 011110 000000 0012222223333333211 11121 3444432211112234688899
Q ss_pred HHHHHhcCCCeEEEEcChhhHHHHHHhcC-CCCCcccCCCccC
Q 002162 255 FIHYVNQDGRVNALYSTPSMYIDAKYAAN-ESWPLKTDDFFPY 296 (958)
Q Consensus 255 li~~iN~~~~~~i~~sT~~~Yf~a~~~~~-~~~p~~~gDf~py 296 (958)
+++++.+.+ .+.+.|.++..+-+.+.. ...++.-||+.|-
T Consensus 258 ~l~~~~~~~--~V~~~t~~eia~~~~~~~~~~~~v~~~~~~~~ 298 (300)
T 3rxz_A 258 FIAEVCAMD--DVWVAGMSQIAEHVRAQKLTPRTLTRPELTPV 298 (300)
T ss_dssp HHHHHHTCT--TEEECCHHHHHHHHHHTCCCCBCCCCCCCC--
T ss_pred HHHHHHhCC--CEEEEcHHHHHHHHHhhcCCCccccCcccccC
Confidence 999998753 488899999988876643 3455667787663
No 14
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=95.07 E-value=1.1 Score=48.40 Aligned_cols=108 Identities=16% Similarity=0.113 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHH
Q 002162 20 NVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHR 98 (958)
Q Consensus 20 ~il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~ 98 (958)
..+..+++.|+++.= .+|..... .+ +.+| +.+|+++++| .||-+=+|.-.+-...+.+.+.++|..+.+
T Consensus 81 ~~~~~ll~iL~~~~v~aTfFv~g~-~~-----~~~p---~~v~~i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~ 150 (308)
T 3cl6_A 81 AGVWRILKLFKAFDIPLTIFAVAM-AA-----QRHP---DVIRAMVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIR 150 (308)
T ss_dssp THHHHHHHHHHHTTCCCEEEECHH-HH-----HHCH---HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEeEHH-HH-----HHCH---HHHHHHHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHH
Confidence 346678999998853 45665522 22 2344 4789999999 789889998777777889999999999999
Q ss_pred HHHHHcCCCCceeeecCCCCCChhhHHHHHhhcC-CcEEEEeec
Q 002162 99 YIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVG-FDFLFFARI 141 (958)
Q Consensus 99 ~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G-~~~~~~~Ri 141 (958)
.|++.+|..|+ +|-. | .++..+..++ ++.| |.+..-.+.
T Consensus 151 ~l~~~~G~~p~-g~r~-~-~~~~~~~~~l-~~~G~~~y~ss~~~ 190 (308)
T 3cl6_A 151 ILTELTGERPL-GWYT-G-RTGPNTRRLV-MEEGGFLYDCDTYD 190 (308)
T ss_dssp HHHHHHSSCCS-EECC-S-SCCTTHHHHH-HHHCCCSEECCCCC
T ss_pred HHHHHhCCCcc-eEEC-C-CCCHHHHHHH-HHCCCceEEeccCC
Confidence 99999998876 5664 3 5688899999 8999 988755553
No 15
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=94.83 E-value=3.5 Score=44.56 Aligned_cols=222 Identities=14% Similarity=0.057 Sum_probs=130.9
Q ss_pred hhHHHHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHH
Q 002162 19 QNVLDSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 97 (958)
Q Consensus 19 ~~il~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~ 97 (958)
..-+..+++.|+++- ..+|..... +. +..| +.+|+++++| .||-+=+|.-.+-..-+.+.+.++|..+.
T Consensus 85 ~~~~~rll~lL~~~~v~aTfFv~g~-----~~-~~~p---~~v~~i~~~G-hEIg~H~~~H~~~~~ls~~~~~~ei~~~~ 154 (321)
T 3s6o_A 85 RAGVWRILREFDKRGLPLTVFGVGM-----AI-ERHP---ELARAFVELG-HEIACHGWRWIHYQDMTPEREAEHMRLGM 154 (321)
T ss_dssp HTHHHHHHHHHHHHTCCCEEEECHH-----HH-HHCH---HHHHHHHHTT-CEEEECCSSCSCCTTCCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHcCCCEEEEEEHH-----Hh-hhCH---HHHHHHHHcC-CEEeeCCccccccccCCHHHHHHHHHHHH
Confidence 345677888898875 346666522 22 3345 4789999999 88988899888888889999999999999
Q ss_pred HHHHHHcCCCCceeeecCCCCCChhhHHHHHhhcC-CcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEEeC
Q 002162 98 RYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVG-FDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGIS 176 (958)
Q Consensus 98 ~~l~~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G-~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~ 176 (958)
+.|++..|..|+ +|- .-.++..+..++ +++| |.+-.-.+.+. ..|+-+..+.. |...-.-.+
T Consensus 155 ~~l~~~~G~~p~-g~r--~g~~s~~t~~ll-~e~G~f~Ydss~~~dd-----------~Py~~~~~~~~--g~~~~l~~i 217 (321)
T 3s6o_A 155 EAIERVTGVRPL-GWY--TGRDSPNTHRLV-AEYGGFLYDSDHYGDD-----------LPFWMDVEVSG--GASVPQLIV 217 (321)
T ss_dssp HHHHHHHSCCCC-EEC--CSSCCTTHHHHH-HHHCCCSEECCCCSCS-----------SCEEEEEECTT--SCEEEEEEC
T ss_pred HHHHHHhCCCcc-cEE--CCCCCHHHHHHH-HHcCCeEEEEeccCCC-----------CCcceeccCcC--CCCCCEEEE
Confidence 999999998876 455 335788899999 8999 99886655431 23433332211 331112235
Q ss_pred CCCCCCCCCCCccccCCCCCCccCCcccccCChHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhHHHHHHHHHH
Q 002162 177 PKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFI 256 (958)
Q Consensus 177 ~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~~~~~~~li 256 (958)
|.+.... ++.... ... ..+-++-.+.+.+.+...-.......-++++|.-............+++++
T Consensus 218 P~t~~~~----D~~~~~-~~g--------~~~~~~~~~~l~~~Fd~~y~eg~~ap~~~~i~lH~~~~g~p~r~~~le~fL 284 (321)
T 3s6o_A 218 PYTLDAN----DMRFAT-PQG--------FNTADHFFHYLRDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFL 284 (321)
T ss_dssp CCCSSSB----GGGGSS-SSC--------CCSHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEETTTTTSHHHHHHHHHHH
T ss_pred eEeeeeC----Ceeeec-CCC--------CCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEeChHHcCCHHHHHHHHHHH
Confidence 6332211 110000 000 011122223333333221111111123455553222222233467889999
Q ss_pred HHHhcCCCeEEEEcChhhHHHHHHhc
Q 002162 257 HYVNQDGRVNALYSTPSMYIDAKYAA 282 (958)
Q Consensus 257 ~~iN~~~~~~i~~sT~~~Yf~a~~~~ 282 (958)
+++.+.. .|.+.|..+..+...+.
T Consensus 285 ~~i~~~~--~Vw~~t~~eia~~~~~~ 308 (321)
T 3s6o_A 285 DHIERHD--RVWVARRVEIARHWREH 308 (321)
T ss_dssp HHHHTCS--SEEECCHHHHHHHHHHH
T ss_pred HHHHhCC--CEEEEcHHHHHHHHHhh
Confidence 9998753 47889999888777654
No 16
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=91.78 E-value=15 Score=39.53 Aligned_cols=109 Identities=17% Similarity=0.175 Sum_probs=81.6
Q ss_pred hhHHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHH
Q 002162 19 QNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 97 (958)
Q Consensus 19 ~~il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~ 97 (958)
+.-+..+++.|+++.= .+|.... ..+ +..| +.+|+++++|- ||.+=||.=.+-..-+.+.+.++|..+.
T Consensus 73 ~~~~~rlL~lL~~~~v~aTfFv~g-~~~-----~~~p---~~v~~i~~~Gh-EIg~H~~~H~~~~~~s~~~~~~ei~~~~ 142 (326)
T 3qbu_A 73 EVGIPRLLKLFKKYHLPATWFVPG-HSI-----ETFP---EQMKMIVDAGH-EVGAHGYSHENPIAMSTKQEEDVLLKSV 142 (326)
T ss_dssp HTHHHHHHHHHHHTTCCCEEECCH-HHH-----HHCH---HHHHHHHTTTC-EEEBCCSSCCCGGGSCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHcCCCEEEEEEh-HHh-----hhCH---HHHHHHHHcCC-EEEeCCCCCcChhhCCHHHHHHHHHHHH
Confidence 3456778899988853 4566542 222 2233 56899999997 8988899887777788999999999999
Q ss_pred HHHHHHcCCCCceeeecCCCC-CChhhHHHHHhhcCCcEEEEee
Q 002162 98 RYIKEQFNVTPRIGWQIDPFG-HSAVQAYLLSAEVGFDFLFFAR 140 (958)
Q Consensus 98 ~~l~~~fG~~p~vgW~~D~FG-hs~~~p~ll~~~~G~~~~~~~R 140 (958)
+.|++.+|..|+ +|- =|+| ++..+..++ +++||.+..-.+
T Consensus 143 ~~l~~~~G~~p~-~fr-~P~g~~~~~~~~~l-~e~G~~ydss~~ 183 (326)
T 3qbu_A 143 ELIKDLTGKAPT-GYV-APWWEFSNITNELL-LKHGFKYDHSLM 183 (326)
T ss_dssp HHHHHHHSSCCC-EEC-CGGGCCSSHHHHHH-HTTTCCEECCCC
T ss_pred HHHHHHHCCCCc-EEE-CCCCCCCHHHHHHH-HHcCCEEEeecc
Confidence 999999998876 343 3444 567888999 899999854443
No 17
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=89.71 E-value=1.8 Score=43.14 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=78.1
Q ss_pred HHHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHH
Q 002162 22 LDSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYI 100 (958)
Q Consensus 22 l~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l 100 (958)
...+++.|+++. ..+|.... . |. +.+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|....+.|
T Consensus 19 ~~~il~iL~~~~v~aTfFv~g-~----~~-~~~~---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 88 (195)
T 2cc0_A 19 TQSLLNALRQNGLRATMFNQG-Q----YA-AQNP---SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAI 88 (195)
T ss_dssp HHHHHHHHHHTTCCCEEEECH-H----HH-HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecC-h----hh-hhCH---HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHH
Confidence 667888888875 34666552 2 22 2344 5789999999 78989999988877788999999999999999
Q ss_pred HHHcCCCCceeeecCCCCC-ChhhHHHHHhhcCCcE
Q 002162 101 KEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 135 (958)
Q Consensus 101 ~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G~~~ 135 (958)
++..|..|+ +--=|+|. +..+..++ +++|+..
T Consensus 89 ~~~~G~~~~--~fr~P~G~~~~~~~~~~-~~~G~~~ 121 (195)
T 2cc0_A 89 AGAGGGTPK--LFRPPYGETNATLRSVE-AKYGLTE 121 (195)
T ss_dssp HHTTSCCCS--EECCGGGCCCHHHHHHH-HHTTCEE
T ss_pred HHHhCCCCC--EEECCCCCcCHHHHHHH-HHCCCeE
Confidence 999998875 45568886 45777888 8999865
No 18
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=89.63 E-value=2 Score=44.11 Aligned_cols=104 Identities=12% Similarity=0.177 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHH
Q 002162 20 NVLDSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHR 98 (958)
Q Consensus 20 ~il~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~ 98 (958)
.....+++.|+++. ..+|.... .+. +.+| +.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+
T Consensus 45 ~~~~~il~iL~~~~v~ATfFv~g-~~~-----~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~ 114 (230)
T 2y8u_A 45 EYTPQLLDLLSRYSARATFFVLG-DAA-----AQNP---GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEE 114 (230)
T ss_dssp TTHHHHHHHHHHTTCCCEEEECH-HHH-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEEec-HHH-----hHCH---HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHH
Confidence 34677888888775 34666552 222 2234 6899999999 789889999888877889999999999999
Q ss_pred HHHHHcCCCCceeeecCCCCC-ChhhHHHHHhhcCCcEE
Q 002162 99 YIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 136 (958)
Q Consensus 99 ~l~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G~~~~ 136 (958)
.|++..|..|+ +--=|+|. +..+..++ +++|+..+
T Consensus 115 ~l~~~~G~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~~ 150 (230)
T 2y8u_A 115 VIRPALGVAPA--YMRPPYLETNELVLQVM-RDLDYRVI 150 (230)
T ss_dssp HHHHHHSSCBS--EECCGGGCCCHHHHHHH-HHTTCEEE
T ss_pred HHHHHhCCCCc--EEECCCCCCCHHHHHHH-HHcCCEEE
Confidence 99999998775 45567875 56788888 89998753
No 19
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=85.74 E-value=3.5 Score=42.50 Aligned_cols=101 Identities=12% Similarity=0.139 Sum_probs=76.7
Q ss_pred HHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHHH
Q 002162 23 DSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 101 (958)
Q Consensus 23 ~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~ 101 (958)
..+++.|+++. ..+|.... .+. +.+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|+
T Consensus 59 ~~il~iL~~~~v~ATfFv~g-~~~-----~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 128 (240)
T 1ny1_A 59 PKVLDVLKKHRVTGTFFVTG-HFV-----KDQP---QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVY 128 (240)
T ss_dssp HHHHHHHHHTTCCCEEEECH-HHH-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeC-hhh-----hhCH---HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHH
Confidence 35788888774 34565542 222 2344 5789999999 789899999888777889999999999999999
Q ss_pred HHcCCC-CceeeecCCCCC-ChhhHHHHHhhcCCcEE
Q 002162 102 EQFNVT-PRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 136 (958)
Q Consensus 102 ~~fG~~-p~vgW~~D~FGh-s~~~p~ll~~~~G~~~~ 136 (958)
+..|.. |+ +--=|||. +..+..++ +++|+..+
T Consensus 129 ~~~G~~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 162 (240)
T 1ny1_A 129 KITGKQDNL--YLRPPRGVFSEYVLKET-KRLGYQTV 162 (240)
T ss_dssp HHHSCCCCC--EECCGGGEECHHHHHHH-HHTTCEEB
T ss_pred HHhCCCCCc--EEeCCCCCCCHHHHHHH-HHcCCEEE
Confidence 999986 54 45567885 67788888 89998753
No 20
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=80.74 E-value=5.3 Score=41.32 Aligned_cols=101 Identities=16% Similarity=0.164 Sum_probs=76.7
Q ss_pred HHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHHH
Q 002162 23 DSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 101 (958)
Q Consensus 23 ~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~ 101 (958)
..+++.|+++. ..+|.... . |. +.+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|+
T Consensus 71 ~~il~iL~~~~v~ATfFv~g-~----~~-~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 140 (247)
T 2j13_A 71 GKILDVLKEKKVPATFFVTG-H----YI-KTQK---DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIK 140 (247)
T ss_dssp HHHHHHHHHHTCCEEEEECH-H----HH-HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeC-h----hh-hhCH---HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHH
Confidence 45777887764 33565542 2 22 2334 5789999999 789899999888888889999999999999999
Q ss_pred HHcCCC-CceeeecCCCCC-ChhhHHHHHhhcCCcEE
Q 002162 102 EQFNVT-PRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 136 (958)
Q Consensus 102 ~~fG~~-p~vgW~~D~FGh-s~~~p~ll~~~~G~~~~ 136 (958)
+.+|.. |+ |--=|+|. +..+..++ +++|+..+
T Consensus 141 ~~~G~~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 174 (247)
T 2j13_A 141 KVTGQKEVK--YVRPPRGVFSERTLALT-KEMGYYNV 174 (247)
T ss_dssp HHHCCSCCC--EECCGGGEECHHHHHHH-HHTTCEEE
T ss_pred HHhCCCCCc--EEeCCCCCCCHHHHHHH-HHCCCEEE
Confidence 999987 43 45567775 67788888 89999864
No 21
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=77.89 E-value=3.8 Score=42.63 Aligned_cols=108 Identities=13% Similarity=0.166 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHhCC-CCeEEEeeHHHHHHHHhcc-CHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHH
Q 002162 20 NVLDSLIPALVADK-NRKFIYVEQAFFQRWWRDQ-SEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 97 (958)
Q Consensus 20 ~il~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~-~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~ 97 (958)
.....+++.|+++. ..+|..... |+... .....+.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.
T Consensus 54 ~~~~~il~iL~~~~vkATFFv~g~-----~~g~~~~~~~p~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~ 127 (254)
T 2iw0_A 54 TFTPQLLDILKQNDVRATFFVNGN-----NWANIEAGSNPDTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLE 127 (254)
T ss_dssp TTHHHHHHHHHHHTCCCEEEECSB-----SSSBTTSTTHHHHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEEECC-----cccccccccCHHHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHH
Confidence 34667888888775 345655432 11000 012237899999999 78989999988877788999999999999
Q ss_pred HHHHHHcCCCCceeeecCCCCC-ChhhHHHHHhhcCCcEE
Q 002162 98 RYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 136 (958)
Q Consensus 98 ~~l~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G~~~~ 136 (958)
+.|++..|..|+ |--=|+|. +..+..++ +++|+..+
T Consensus 128 ~~l~~~~G~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 164 (254)
T 2iw0_A 128 EATRRIDGFAPK--YMRAPYLSCDAGCQGDL-GGLGYHII 164 (254)
T ss_dssp HHHHHHHSCEES--EECCGGGCCCHHHHHHH-HHTTCEEE
T ss_pred HHHHHHhCCCCC--EEECCCCCCCHHHHHHH-HHcCCeEE
Confidence 999999998765 55667875 66788888 89998753
No 22
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=75.72 E-value=8.1 Score=40.47 Aligned_cols=83 Identities=17% Similarity=0.258 Sum_probs=64.5
Q ss_pred HHHHHHHHhCCCeEEEcceeeecccCC-----------------------CC----HHHHHHHHHHHHHHHHHHcCCCCc
Q 002162 57 QNVVKQLVNSGQLELINGGMCMHDEAA-----------------------PH----YIDMIDQTTLGHRYIKEQFNVTPR 109 (958)
Q Consensus 57 ~~~vk~LV~~GrlE~vgGgwv~~Dea~-----------------------~~----~es~Irql~~G~~~l~~~fG~~p~ 109 (958)
.+.+|+++++|-.||-+=+|..|.-.. .+ -+.+.+++....+.|++.+|..|+
T Consensus 126 ~~~lr~m~~~G~~eIgsHT~~hH~~~~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~~~~G~~~~ 205 (268)
T 3vus_A 126 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 205 (268)
T ss_dssp HHHHHHHHHTTSEEECBCCSSCCSBCCCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHCCCeEEecCccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 478999999999998888887554211 12 345788899999999999999876
Q ss_pred eeeecCCCCC-ChhhHHHHHhhcCCcEEEEeecC
Q 002162 110 IGWQIDPFGH-SAVQAYLLSAEVGFDFLFFARID 142 (958)
Q Consensus 110 vgW~~D~FGh-s~~~p~ll~~~~G~~~~~~~Ri~ 142 (958)
+..=|||. +..+-.++ +++||+..+..+..
T Consensus 206 --~fr~PyG~~n~~~~~~~-~~~Gy~~a~t~~~g 236 (268)
T 3vus_A 206 --VFVWPYGEANGIAIEEL-KKLGYDMFFTLESG 236 (268)
T ss_dssp --EEECGGGCCCHHHHHHH-HHTTCCEEECCCSS
T ss_pred --EEEeCCCcCCHHHHHHH-HHCCCcEEEEecCC
Confidence 34559996 67778898 89999998876644
No 23
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=74.17 E-value=6.5 Score=40.83 Aligned_cols=102 Identities=14% Similarity=0.054 Sum_probs=76.7
Q ss_pred HHHHHHHHHhCC-CCeE-EEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeee--cccCCCCHHHHHHHHHHHH
Q 002162 22 LDSLIPALVADK-NRKF-IYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCM--HDEAAPHYIDMIDQTTLGH 97 (958)
Q Consensus 22 l~~vl~~L~~~p-~~kF-~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~--~Dea~~~~es~Irql~~G~ 97 (958)
...+++.|+++. ..+| ..... | .+.+|+ +.+|+++++| .||-+=+|.- ++-...+.+.+.+++....
T Consensus 41 t~~il~iL~~~~v~ATF~Fv~g~-----~-~~~~p~--~~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~ 111 (254)
T 2vyo_A 41 TDRILNTLDELGVKATFSFTVNQ-----K-AVGNVG--QLYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREI 111 (254)
T ss_dssp HHHHHHHHHHHTCCCEEEECCSS-----C-CCGGGT--HHHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEccCh-----H-HhHCHH--HHHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHH
Confidence 456788887764 3466 44321 1 133443 3899999999 7898899988 7777778999999999999
Q ss_pred HHHHHHcCCCCceeeecCCC--CC-ChhhHHHHHhhcCCcE
Q 002162 98 RYIKEQFNVTPRIGWQIDPF--GH-SAVQAYLLSAEVGFDF 135 (958)
Q Consensus 98 ~~l~~~fG~~p~vgW~~D~F--Gh-s~~~p~ll~~~~G~~~ 135 (958)
+.+++..|..|+ |--=|+ |. +..+..++ ++.|+..
T Consensus 112 ~~l~~~~G~~~~--~fr~P~~~G~~~~~~~~~l-~~~G~~~ 149 (254)
T 2vyo_A 112 DTIDGLSGTEIR--YAAVPICNGQVNSEMYNIL-TERGVLP 149 (254)
T ss_dssp HHHHHHHTSCCC--EEECCCBTTEECHHHHHHH-HTTTCEE
T ss_pred HHHHHHHCCCCe--EEeCCccCCCCCHHHHHHH-HHCCCEE
Confidence 999999998775 445677 74 67788888 8999875
No 24
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=71.00 E-value=21 Score=41.91 Aligned_cols=185 Identities=16% Similarity=0.242 Sum_probs=114.7
Q ss_pred HhhHHHHHHHHHHhCCC-CeEEEeeHHHHHHHHhccCH----------------HHHHHHHHHHhCCCeEEEcceeeecc
Q 002162 18 VQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSE----------------EVQNVVKQLVNSGQLELINGGMCMHD 80 (958)
Q Consensus 18 v~~il~~vl~~L~~~p~-~kF~~~E~~~~~~W~~~~~p----------------~~~~~vk~LV~~GrlE~vgGgwv~~D 80 (958)
-...+..++..|+++-= .+|... . .|... .+ -..+.+|++.++|-+||-+=+|..|-
T Consensus 80 y~d~y~~AlPILkkygvpATfFVi-g----~~i~~-~~~~~~~~~~~~~~~~~~lsw~qlrem~~sG~~EIGsHT~shH~ 153 (618)
T 4f9d_A 80 YQSFYTRVFPILQAFQWPAVWAPV-G----SWVDT-PADKQVKFGDELVDREYFATWQQVREVARSRLVELASHTWNSHY 153 (618)
T ss_dssp BHHHHHTHHHHHHHHTCCEEEEEC-H----HHHTS-CTTSCEEETTEEECGGGBCCHHHHHHHHHHTSEEECBCCSSCCS
T ss_pred CcccHHHHHHHHHHcCCCEEEEEe-c----ccccC-CcccccccccccccccccCCHHHHHHHHHCCCcEEeeccccccc
Confidence 35566778888887642 234333 2 23322 11 12478999999999998777887442
Q ss_pred cC------------CC-----------C----HHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCC-ChhhHHHHHhhcC
Q 002162 81 EA------------AP-----------H----YIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVG 132 (958)
Q Consensus 81 ea------------~~-----------~----~es~Irql~~G~~~l~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G 132 (958)
-. ++ + -+.+.++|....+.|++.+|..|+ +..=|||. +...-.++ +++|
T Consensus 154 ~l~~~p~G~~~Pa~l~r~~~~~~~~~es~~e~~~~i~~EL~~Sk~~Le~~lG~~~~--~FayPyG~~n~~~~~~a-ke~G 230 (618)
T 4f9d_A 154 GIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH--VFVWPYGEANGIAIEEL-KKLG 230 (618)
T ss_dssp EEECSTTCCEEEGGGSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC--EEECGGGCCCHHHHHHH-HHTT
T ss_pred ccccccccccccchhcccccccccccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC--EEEcCCCCCCHHHHHHH-HHcC
Confidence 11 00 1 256899999999999999999876 34559996 78888999 8999
Q ss_pred CcEEEEeecChHhHHhhcccCceEEEEeeCCCCCCCCceeEEeCCCCCCCCCCCCccccCCCCCCccCCcccccCChHHH
Q 002162 133 FDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPER 212 (958)
Q Consensus 133 ~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~ 212 (958)
|+..+..+... .+. .+ .|.-| + +...+ ..+
T Consensus 231 y~~afTt~~G~--------------~~~-~d---------------~~~Lp-R---i~V~~------------~~s---- 260 (618)
T 4f9d_A 231 YDMFFTLESGL--------------ANA-SQ---------------LDSIP-R---VLIAN------------NPS---- 260 (618)
T ss_dssp CCEEECCCSSC--------------EET-TC---------------CSSBC-C---EECCS------------SCC----
T ss_pred CEEEEEecCCC--------------CCC-CC---------------Cceee-e---EEecC------------CCC----
Confidence 99988766431 111 01 11111 0 00000 011
Q ss_pred HHHHHHHHHHhhcccCCCeEEEEecCCCCCc-chhHHHHHHHHHHHHHhcCC
Q 002162 213 VNDFVSAAIAQANITRTNHIMWTMGTDFKYQ-YAHTWFRQMDKFIHYVNQDG 263 (958)
Q Consensus 213 ~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~-~a~~~~~~~~~li~~iN~~~ 263 (958)
++.|...+.... .......+..=-|+-|+ +...+-+|+++||+.+...+
T Consensus 261 l~~F~~~l~g~~--~~~~~rv~~vdLDy~yd~dp~q~~~nl~~li~ri~~~g 310 (618)
T 4f9d_A 261 LKEFAQQIITVQ--EKSPQRIMHIDLDYVYDENLQQMDRNIDVLIQRVKDMQ 310 (618)
T ss_dssp HHHHHHHHHTTT--CCCCCEEEEECHHHHCCSSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhccc--ccCCceEEEEeeccccCCCHHHHHHhHHHHHHHHHHcC
Confidence 245555554432 35555666666688886 45556889999999987543
No 25
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=61.61 E-value=27 Score=39.13 Aligned_cols=97 Identities=11% Similarity=0.131 Sum_probs=73.0
Q ss_pred HHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHHH
Q 002162 23 DSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 101 (958)
Q Consensus 23 ~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~ 101 (958)
..+++.|.++. ..+|..... |.+.+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|+
T Consensus 252 ~~il~iL~k~~vkATFFvig~------~i~~~p---~~lr~m~~~G-heIgnHT~sH~~l~~ls~~~~~~EI~~s~~~L~ 321 (431)
T 2c1i_A 252 PQVLETLAKYDIKATFFVLGK------NVSGNE---DLVKRIKSEG-HVVGNHSWSHPILSQLSLDEAKKQITDTEDVLT 321 (431)
T ss_dssp HHHHHHHHHTTCCCEEEECGG------GTTTCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEEECc------cccCCH---HHHHHHHHCC-CEEeecCCCCcccccCCHHHHHHHHHHHHHHHH
Confidence 46788888875 345555421 223455 5799999999 789899999888777789999999999999999
Q ss_pred HHcCCCCceeeecCCCCCChhhHHHHHhhcCCc
Q 002162 102 EQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFD 134 (958)
Q Consensus 102 ~~fG~~p~vgW~~D~FGhs~~~p~ll~~~~G~~ 134 (958)
+..|..|+ +-.=|||... +.++ +.+|+.
T Consensus 322 ~~~G~~~~--~fr~PyG~~n--~~v~-~~~G~~ 349 (431)
T 2c1i_A 322 KVLGSSSK--LMRPPYGAIT--DDIR-NSLDLS 349 (431)
T ss_dssp HHHSCCCC--EECCGGGCCC--HHHH-HTSSCE
T ss_pred HhhCCCCe--EEECCCCCCC--HHHH-HHCCCe
Confidence 99997765 4455899754 5567 777765
No 26
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=54.56 E-value=4.4 Score=39.04 Aligned_cols=19 Identities=32% Similarity=0.455 Sum_probs=15.1
Q ss_pred ceeeecCCCCCChhh-HHHH
Q 002162 109 RIGWQIDPFGHSAVQ-AYLL 127 (958)
Q Consensus 109 ~vgW~~D~FGhs~~~-p~ll 127 (958)
+.||..|+||++|++ |.++
T Consensus 106 ~~G~v~D~fGv~W~i~~~~~ 125 (163)
T 1u69_A 106 ACGWCRDKWGISWQITPRVL 125 (163)
T ss_dssp STTEEECTTSCEEEEEEHHH
T ss_pred EEEEEECCCCCEEEEEeEch
Confidence 678999999999983 4443
No 27
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=47.38 E-value=27 Score=35.00 Aligned_cols=94 Identities=17% Similarity=0.163 Sum_probs=68.5
Q ss_pred HHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHHH
Q 002162 23 DSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 101 (958)
Q Consensus 23 ~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~ 101 (958)
..+++.|+++. ..+|..... .. +.+|+ +.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|+
T Consensus 21 ~~il~iL~~~~v~ATfFv~g~-~~-----~~~p~--~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 91 (216)
T 2c71_A 21 ARVLDKLDKYNVKATFMVVGQ-RV-----NDSTA--AIIRRMVNSG-HEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQ 91 (216)
T ss_dssp HHHHHHHHHHTCCCEEEECGG-GC-----SHHHH--HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECh-hh-----hhCHH--HHHHHHHHCC-CEEeeCCcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 46788888765 346665422 11 11232 4899999999 789999999888877889999999999999999
Q ss_pred HHcCCCCceeeecCCCCCCh-hhHHHH
Q 002162 102 EQFNVTPRIGWQIDPFGHSA-VQAYLL 127 (958)
Q Consensus 102 ~~fG~~p~vgW~~D~FGhs~-~~p~ll 127 (958)
+..|..|+ +--=|+|... .+..++
T Consensus 92 ~~~G~~~~--~fr~P~G~~~~~~~~~l 116 (216)
T 2c71_A 92 KYAGTTPK--FFRPPNLETSPTLFNNV 116 (216)
T ss_dssp HHHSCCCS--EECCGGGCCCHHHHHHC
T ss_pred HhhCCCCe--EEECCCCCCCHHHHHHH
Confidence 99998776 4556888643 333333
No 28
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=43.43 E-value=60 Score=35.23 Aligned_cols=80 Identities=11% Similarity=0.072 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCCeEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCCCceeeecCCCCC-ChhhHHHHHhhcCCc
Q 002162 56 VQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFD 134 (958)
Q Consensus 56 ~~~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~vgW~~D~FGh-s~~~p~ll~~~~G~~ 134 (958)
..++||+|.++|-+||-+=+|.-++-.-.+ ..-++|....+.|++.+|..|+ +..=|||. +...-.++ +.|++
T Consensus 246 sw~qIrem~~~G~~eIGsHT~sH~~L~~ls--~~e~EI~~Sk~~Le~~lG~~v~--~FAYPyG~yn~~v~~~a--k~gy~ 319 (360)
T 4hd5_A 246 STSEIKEMVDSGIFSVQSHTATHADLPKIT--NYEEELKGSKEKLEKITGKPVI--AIAYXFGHVDDKVVTET--KKYYQ 319 (360)
T ss_dssp CHHHHHHHHHTTSEEEEECCSSCCCGGGCS--CHHHHHHHHHHHHHHHHSSCCC--EEECGGGCCCHHHHHHH--TTTCS
T ss_pred CHHHHHHHHHcCCceeeccCCcccccccCC--HHHHHHHHHHHHHHHHhCCCCc--EEEcCCCCCCHHHHHHH--HhCCc
Confidence 356799999999999877777766643332 2337889999999999998775 45569996 55555665 45899
Q ss_pred EEEEeec
Q 002162 135 FLFFARI 141 (958)
Q Consensus 135 ~~~~~Ri 141 (958)
..+..+.
T Consensus 320 ~AfTt~~ 326 (360)
T 4hd5_A 320 FATTTKP 326 (360)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 8887653
No 29
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=39.63 E-value=44 Score=35.64 Aligned_cols=103 Identities=15% Similarity=0.180 Sum_probs=72.7
Q ss_pred HHHHHHHHHhCC-CCeEEEeeHHHHHHHHhccCHHHHHHHHHHHhCCCeEEEcceeeecccC-----CCCHHHHHHHHHH
Q 002162 22 LDSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEA-----APHYIDMIDQTTL 95 (958)
Q Consensus 22 l~~vl~~L~~~p-~~kF~~~E~~~~~~W~~~~~p~~~~~vk~LV~~GrlE~vgGgwv~~Dea-----~~~~es~Irql~~ 95 (958)
...+++.|+++. ..+|..... |....+| +.+|+++++| .||-+=+|.-++-. ..+.+.+.+++..
T Consensus 122 t~~iLdiL~~~~vkATFFv~G~-----~i~~~~p---~~vr~i~~~G-heIgnHt~sH~~~~~~~~~~ls~~~~~~Ei~~ 192 (311)
T 2w3z_A 122 TPKILDVLAQQHVHATFFLVGC-----NITDKVK---PILQRQITEG-HALGIHSFSHVYSLLYPNRVGNTQQIVSEVTR 192 (311)
T ss_dssp HHHHHHHHHHTTCCCEEEECGG-----GCCGGGH---HHHHHHHHTT-CEEEECCSSCCHHHHSGGGBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEEeCh-----hhcccCH---HHHHHHHHCC-CeeeccCCccccccccccCCCCHHHHHHHHHH
Confidence 466888888775 346665531 2211133 5799999999 78888888765432 3478999999999
Q ss_pred HHHHHHHHcC--CCCceeeecCCCCCChh-----hHHHHHhhcCCcEE
Q 002162 96 GHRYIKEQFN--VTPRIGWQIDPFGHSAV-----QAYLLSAEVGFDFL 136 (958)
Q Consensus 96 G~~~l~~~fG--~~p~vgW~~D~FGhs~~-----~p~ll~~~~G~~~~ 136 (958)
+.+.|++..| ..|+ +--=|+|.... +..++ +.+|+..+
T Consensus 193 ~~~~L~~~~G~~~~p~--~fR~PyG~~~~~~~~~~~~~l-~~~G~~~v 237 (311)
T 2w3z_A 193 TQNALKDQLGQNFKTG--VWRYPGGHLSWTGLEAADKQL-AAQGIQWM 237 (311)
T ss_dssp HHHHHHHHHCTTBCCC--EECCTTCGGGCBCCHHHHHHH-HTTTCEEC
T ss_pred HHHHHHHHhCCCCCCc--EEECCCCCcChhHHHHHHHHH-HHCCCEEE
Confidence 9999999999 4554 45568887542 44788 89998763
No 30
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=32.49 E-value=28 Score=28.57 Aligned_cols=23 Identities=26% Similarity=0.627 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCCCeEEE-ccee
Q 002162 54 EEVQNVVKQLVNSGQLELI-NGGM 76 (958)
Q Consensus 54 p~~~~~vk~LV~~GrlE~v-gGgw 76 (958)
++.++-+-++|++|+||.+ ||-|
T Consensus 48 ~eL~~fL~~~v~e~kL~~~~gG~Y 71 (74)
T 1ldd_A 48 QQLEGYLNTLADEGRLKYIANGSY 71 (74)
T ss_dssp HHHHHHHHHHHHTTSEECCTTTEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCCEE
Confidence 5677788999999999964 7776
No 31
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=29.01 E-value=44 Score=33.62 Aligned_cols=60 Identities=8% Similarity=0.100 Sum_probs=47.2
Q ss_pred hHhhHHHHHHHHHHhCCCCeEEEeeHHHHHHHHhccCHH-------HHHHHHHHHhCCCeEEEccee
Q 002162 17 CVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEE-------VQNVVKQLVNSGQLELINGGM 76 (958)
Q Consensus 17 ~v~~il~~vl~~L~~~p~~kF~~~E~~~~~~W~~~~~p~-------~~~~vk~LV~~GrlE~vgGgw 76 (958)
.-+--+-.++.-+++=|..-|+.+|+.-|+.-+...+|. .|++++-|=..|-|||+|-|-
T Consensus 187 ~~rgWlldi~~cid~i~~~eFtL~diY~fe~~L~~~~P~N~~Ik~KIRQqLQ~LRD~g~IeFl~rG~ 253 (257)
T 4esj_A 187 SSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGK 253 (257)
T ss_dssp HHHHHHHHHHHHHHHSCSSEEEHHHHHTTHHHHHHHSTTCSCHHHHHHHHHHHHHHTTSEEECSTTE
T ss_pred ccccHHHHHHHHHHhcCcceeeHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHhhcCceEEecCCc
Confidence 344556678888889999999999998788888777763 466666777899999999774
No 32
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=27.54 E-value=1.9e+02 Score=29.97 Aligned_cols=27 Identities=15% Similarity=0.150 Sum_probs=23.0
Q ss_pred CceEEccCeEEEEEECCCCcEEEEEec
Q 002162 543 DTIEVGPGNLKLLYSGKRAKLMRYINS 569 (958)
Q Consensus 543 ~~~~ieN~~~~v~~~~~~G~i~si~dk 569 (958)
..++|+|+.++++|+...|.|.++..|
T Consensus 4 ~~i~v~td~l~~~is~~GG~I~~~~Lk 30 (280)
T 3bs6_A 4 KLISVKTDVLDLTINTRGGDVEQALLP 30 (280)
T ss_dssp CEEEEECSSCEEEEETBTTEEEEEEEE
T ss_pred CEEEEECCcEEEEEECCCCeEeeeEcC
Confidence 357899999999999878999887664
No 33
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=21.77 E-value=3.3e+02 Score=28.90 Aligned_cols=29 Identities=14% Similarity=0.140 Sum_probs=24.2
Q ss_pred CCceEEccCeEEEEEECCCCcEEEEEecc
Q 002162 542 NDTIEVGPGNLKLLYSGKRAKLMRYINSK 570 (958)
Q Consensus 542 ~~~~~ieN~~~~v~~~~~~G~i~si~dk~ 570 (958)
...++|+|+.++++|+...|.|.++..|+
T Consensus 34 ~~~i~V~td~l~~~is~~GG~I~~~~Lk~ 62 (330)
T 3blc_A 34 GKLISVKTDVLDLTINTRGGDVEQALLPA 62 (330)
T ss_dssp CCEEEEECSSCEEEEETBTCCEEEEEEEE
T ss_pred CCEEEEECCcEEEEEECCCCEEeEEECCC
Confidence 34689999999999998789998887653
No 34
>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7
Probab=20.92 E-value=24 Score=32.69 Aligned_cols=16 Identities=38% Similarity=0.576 Sum_probs=14.2
Q ss_pred ceeeecCCCCCChhhH
Q 002162 109 RIGWQIDPFGHSAVQA 124 (958)
Q Consensus 109 ~vgW~~D~FGhs~~~p 124 (958)
+.||..||||+++++.
T Consensus 111 ~~g~v~Dp~G~~W~i~ 126 (139)
T 1tsj_A 111 EFAWVQDKFGVSFQLA 126 (139)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred eEEEEECCCCCEEEEe
Confidence 7999999999999753
Done!