Query 002164
Match_columns 958
No_of_seqs 633 out of 4331
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 15:05:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002164.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002164hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 1.3E-55 4.4E-60 540.6 56.6 629 110-902 18-729 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 3.6E-54 1.2E-58 530.0 60.9 629 99-899 22-740 (741)
3 1xfd_A DIP, dipeptidyl aminope 100.0 4.2E-53 1.4E-57 519.1 47.6 632 110-899 18-722 (723)
4 2z3z_A Dipeptidyl aminopeptida 100.0 6.2E-51 2.1E-55 498.2 59.2 569 190-898 83-706 (706)
5 1z68_A Fibroblast activation p 100.0 4.5E-51 1.5E-55 500.5 55.6 606 163-899 36-719 (719)
6 3azo_A Aminopeptidase; POP fam 100.0 1.2E-48 4.2E-53 474.2 58.4 575 189-901 24-651 (662)
7 3o4h_A Acylamino-acid-releasin 100.0 6.3E-49 2.1E-53 468.7 50.7 538 190-900 23-581 (582)
8 2xdw_A Prolyl endopeptidase; a 100.0 1.1E-47 3.8E-52 468.2 60.7 584 191-900 76-706 (710)
9 2bkl_A Prolyl endopeptidase; m 100.0 2.1E-47 7.2E-52 464.3 61.1 579 195-901 74-678 (695)
10 3iuj_A Prolyl endopeptidase; h 100.0 1.6E-46 5.6E-51 455.1 60.4 576 196-901 84-687 (693)
11 1yr2_A Prolyl oligopeptidase; 100.0 5.5E-46 1.9E-50 455.0 59.1 580 195-902 113-721 (741)
12 2xe4_A Oligopeptidase B; hydro 100.0 2E-43 7E-48 430.0 58.4 574 190-901 118-744 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 2.9E-35 9.8E-40 348.6 51.4 320 552-900 372-708 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 2.4E-23 8.2E-28 234.1 30.3 344 177-620 21-386 (388)
15 3pe7_A Oligogalacturonate lyas 99.9 2.6E-23 8.9E-28 233.8 27.9 329 111-563 38-386 (388)
16 4a5s_A Dipeptidyl peptidase 4 99.9 4.2E-23 1.4E-27 252.4 27.9 348 113-571 66-459 (740)
17 1k32_A Tricorn protease; prote 99.9 1.4E-22 4.9E-27 257.4 32.6 390 108-627 14-470 (1045)
18 1xfd_A DIP, dipeptidyl aminope 99.9 3.5E-22 1.2E-26 244.3 31.2 335 110-530 62-430 (723)
19 3f67_A Putative dienelactone h 99.9 1.9E-22 6.4E-27 210.3 22.0 221 637-897 4-241 (241)
20 4ao6_A Esterase; hydrolase, th 99.9 3.7E-22 1.3E-26 210.3 22.7 230 617-899 9-259 (259)
21 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 6.2E-22 2.1E-26 222.2 25.7 231 637-901 125-367 (386)
22 3hxk_A Sugar hydrolase; alpha- 99.9 4.8E-22 1.6E-26 212.0 23.1 238 642-902 17-270 (276)
23 2ecf_A Dipeptidyl peptidase IV 99.9 6.2E-21 2.1E-25 234.0 33.0 331 190-626 38-423 (741)
24 3c5m_A Oligogalacturonate lyas 99.9 4.6E-21 1.6E-25 215.9 29.4 324 111-567 38-390 (396)
25 3c5m_A Oligogalacturonate lyas 99.9 2.9E-21 1E-25 217.5 27.3 327 191-626 38-392 (396)
26 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.9E-21 2.4E-25 215.6 30.3 249 163-521 159-409 (415)
27 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.2E-21 2.1E-25 216.0 29.2 255 199-572 142-398 (415)
28 1z68_A Fibroblast activation p 99.9 1.9E-21 6.3E-26 237.7 26.6 343 110-570 61-452 (719)
29 3ebl_A Gibberellin receptor GI 99.9 3.4E-21 1.2E-25 213.3 26.2 244 635-902 60-355 (365)
30 3bxp_A Putative lipase/esteras 99.9 2.6E-21 8.9E-26 206.5 23.0 237 637-898 2-271 (277)
31 2z3z_A Dipeptidyl aminopeptida 99.9 2E-20 6.8E-25 228.1 33.0 333 109-567 82-441 (706)
32 2i3d_A AGR_C_3351P, hypothetic 99.9 1.6E-20 5.3E-25 196.9 27.7 211 641-901 25-236 (249)
33 3ksr_A Putative serine hydrola 99.9 2E-21 6.8E-26 208.9 20.3 232 638-902 5-245 (290)
34 1k32_A Tricorn protease; prote 99.9 2.3E-20 8E-25 237.1 32.4 272 190-603 205-491 (1045)
35 3k2i_A Acyl-coenzyme A thioest 99.9 9.2E-21 3.1E-25 215.0 23.4 221 651-901 144-414 (422)
36 3hlk_A Acyl-coenzyme A thioest 99.9 8.5E-21 2.9E-25 216.3 22.7 221 651-901 160-430 (446)
37 1vlq_A Acetyl xylan esterase; 99.9 5.7E-21 2E-25 210.2 20.5 236 634-899 63-335 (337)
38 3ga7_A Acetyl esterase; phosph 99.9 2.4E-20 8.3E-25 204.0 24.2 233 637-900 61-324 (326)
39 3doh_A Esterase; alpha-beta hy 99.9 2E-20 7E-25 209.1 22.9 226 638-897 143-378 (380)
40 3o4h_A Acylamino-acid-releasin 99.9 1.2E-20 4E-25 224.5 22.1 295 101-567 15-320 (582)
41 3fcx_A FGH, esterase D, S-form 99.9 3.8E-21 1.3E-25 205.7 16.0 241 639-899 16-281 (282)
42 1zi8_A Carboxymethylenebutenol 99.9 9.7E-21 3.3E-25 196.5 18.5 207 640-900 4-234 (236)
43 3i6y_A Esterase APC40077; lipa 99.8 6E-21 2.1E-25 204.0 16.4 239 638-899 16-279 (280)
44 3fcy_A Xylan esterase 1; alpha 99.8 1.6E-20 5.6E-25 207.4 20.4 231 635-897 78-344 (346)
45 1l7a_A Cephalosporin C deacety 99.8 2.8E-20 9.7E-25 202.6 21.7 229 636-899 53-317 (318)
46 2o2g_A Dienelactone hydrolase; 99.8 5.8E-20 2E-24 188.7 22.9 208 637-899 10-223 (223)
47 3fak_A Esterase/lipase, ESTE5; 99.8 1.6E-20 5.6E-25 204.6 19.7 222 651-902 66-312 (322)
48 3bjr_A Putative carboxylestera 99.8 5.9E-21 2E-25 204.4 15.2 239 635-897 15-282 (283)
49 2wtm_A EST1E; hydrolase; 1.60A 99.8 8E-20 2.7E-24 191.8 23.5 227 642-899 4-250 (251)
50 1mpx_A Alpha-amino acid ester 99.8 3.1E-20 1.1E-24 219.4 22.2 248 637-901 23-357 (615)
51 3ls2_A S-formylglutathione hyd 99.8 1.6E-20 5.5E-25 200.7 17.3 239 638-899 14-279 (280)
52 3trd_A Alpha/beta hydrolase; c 99.8 8.1E-20 2.8E-24 185.6 21.2 203 638-894 5-207 (208)
53 3e4d_A Esterase D; S-formylglu 99.8 1.3E-20 4.6E-25 201.1 16.0 235 639-899 15-278 (278)
54 2ojh_A Uncharacterized protein 99.8 5.9E-19 2E-23 189.3 28.4 259 163-529 22-291 (297)
55 2b9v_A Alpha-amino acid ester 99.8 6.2E-20 2.1E-24 217.4 21.8 251 637-901 35-369 (652)
56 2hdw_A Hypothetical protein PA 99.8 2E-19 6.9E-24 200.4 23.9 236 635-898 64-367 (367)
57 2fuk_A XC6422 protein; A/B hyd 99.8 2.7E-19 9.1E-24 183.5 22.7 210 638-900 9-218 (220)
58 2gop_A Trilobed protease; beta 99.8 4.9E-19 1.7E-23 195.5 25.3 332 100-631 6-343 (347)
59 2ymu_A WD-40 repeat protein; u 99.8 4.3E-18 1.5E-22 202.1 34.6 334 110-600 223-566 (577)
60 4fbl_A LIPS lipolytic enzyme; 99.8 2.3E-19 7.9E-24 191.6 20.8 202 670-897 51-281 (281)
61 3qh4_A Esterase LIPW; structur 99.8 1.5E-19 5.2E-24 196.4 19.0 234 635-899 56-316 (317)
62 2o7r_A CXE carboxylesterase; a 99.8 1.2E-19 4E-24 199.8 18.0 277 596-899 8-332 (338)
63 2hm7_A Carboxylesterase; alpha 99.8 4.9E-19 1.7E-23 192.2 22.0 234 635-898 44-309 (310)
64 3ain_A 303AA long hypothetical 99.8 1.1E-18 3.8E-23 190.0 24.8 234 635-899 61-321 (323)
65 2zsh_A Probable gibberellin re 99.8 8.7E-19 3E-23 193.7 23.8 238 635-896 68-350 (351)
66 4b6g_A Putative esterase; hydr 99.8 5.9E-20 2E-24 196.6 13.9 237 639-899 22-283 (283)
67 3azo_A Aminopeptidase; POP fam 99.8 3.1E-18 1.1E-22 207.0 30.2 318 109-571 24-379 (662)
68 2xdw_A Prolyl endopeptidase; a 99.8 1.4E-17 4.7E-22 202.6 35.1 332 101-569 66-424 (710)
69 1lzl_A Heroin esterase; alpha/ 99.8 9E-19 3.1E-23 191.3 22.2 237 635-900 47-318 (323)
70 2ymu_A WD-40 repeat protein; u 99.8 2.2E-17 7.4E-22 196.0 35.9 355 110-625 182-546 (577)
71 2wir_A Pesta, alpha/beta hydro 99.8 4.3E-19 1.5E-23 192.9 19.4 233 637-899 49-312 (313)
72 3hju_A Monoglyceride lipase; a 99.8 2.1E-18 7.3E-23 189.9 24.3 232 640-901 35-315 (342)
73 4e15_A Kynurenine formamidase; 99.8 7.2E-20 2.4E-24 198.1 12.1 210 639-877 58-281 (303)
74 3h04_A Uncharacterized protein 99.8 5E-18 1.7E-22 180.0 26.2 225 639-899 3-274 (275)
75 3pfb_A Cinnamoyl esterase; alp 99.8 3.3E-18 1.1E-22 181.3 24.6 228 638-897 21-267 (270)
76 3k6k_A Esterase/lipase; alpha/ 99.8 8.7E-19 3E-23 191.1 20.4 230 637-902 58-312 (322)
77 2bkl_A Prolyl endopeptidase; m 99.8 1.3E-17 4.4E-22 202.2 32.7 329 101-571 62-407 (695)
78 1jjf_A Xylanase Z, endo-1,4-be 99.8 6.4E-18 2.2E-22 179.1 25.7 225 635-898 28-261 (268)
79 1lns_A X-prolyl dipeptidyl ami 99.8 8.8E-19 3E-23 210.5 20.9 245 645-902 179-525 (763)
80 1jfr_A Lipase; serine hydrolas 99.8 3.1E-18 1.1E-22 180.9 22.7 205 637-901 23-234 (262)
81 2c7b_A Carboxylesterase, ESTE1 99.8 1E-18 3.4E-23 189.8 19.3 232 637-899 46-309 (311)
82 2uz0_A Esterase, tributyrin es 99.8 2.2E-18 7.7E-23 182.0 20.9 240 637-900 5-258 (263)
83 1jkm_A Brefeldin A esterase; s 99.8 2E-18 6.9E-23 191.3 20.4 238 636-898 79-358 (361)
84 2ojh_A Uncharacterized protein 99.8 2.8E-17 9.7E-22 176.1 28.8 270 216-605 19-293 (297)
85 3pe6_A Monoglyceride lipase; a 99.8 1.2E-17 4.2E-22 179.6 24.8 228 643-900 21-296 (303)
86 3vis_A Esterase; alpha/beta-hy 99.8 2.4E-18 8.2E-23 186.1 19.2 193 647-901 79-278 (306)
87 1l0q_A Surface layer protein; 99.8 3.5E-16 1.2E-20 175.6 37.5 355 163-660 12-385 (391)
88 4h0c_A Phospholipase/carboxyle 99.8 1.9E-18 6.4E-23 174.9 16.7 184 669-895 21-209 (210)
89 1auo_A Carboxylesterase; hydro 99.8 1.3E-17 4.4E-22 170.5 23.1 185 669-898 13-217 (218)
90 1ufo_A Hypothetical protein TT 99.8 9.7E-18 3.3E-22 173.7 22.4 214 644-899 7-236 (238)
91 1gxr_A ESG1, transducin-like e 99.8 1.2E-16 4E-21 175.1 31.7 301 110-528 11-325 (337)
92 2pbl_A Putative esterase/lipas 99.8 3.3E-18 1.1E-22 180.6 17.5 200 641-878 40-245 (262)
93 1k8q_A Triacylglycerol lipase, 99.8 1.9E-17 6.3E-22 184.9 24.5 242 637-897 25-377 (377)
94 3fnb_A Acylaminoacyl peptidase 99.8 5.2E-18 1.8E-22 191.2 20.1 233 637-900 133-403 (405)
95 4fhz_A Phospholipase/carboxyle 99.8 7.9E-18 2.7E-22 178.0 19.7 203 649-900 49-268 (285)
96 3llc_A Putative hydrolase; str 99.8 1.8E-17 6.1E-22 175.3 22.3 227 638-896 10-268 (270)
97 3og9_A Protein YAHD A copper i 99.8 3.7E-17 1.3E-21 166.1 23.4 180 669-897 16-208 (209)
98 1fj2_A Protein (acyl protein t 99.8 1.8E-17 6.2E-22 171.2 21.3 198 656-900 14-230 (232)
99 3i2k_A Cocaine esterase; alpha 99.8 8.5E-18 2.9E-22 197.1 19.8 237 639-902 9-326 (587)
100 3mve_A FRSA, UPF0255 protein V 99.8 5E-18 1.7E-22 190.9 17.2 229 637-899 166-414 (415)
101 1yr2_A Prolyl oligopeptidase; 99.8 9.8E-17 3.4E-21 195.9 29.9 330 101-569 101-449 (741)
102 1jji_A Carboxylesterase; alpha 99.8 5.9E-18 2E-22 183.5 16.7 226 638-896 55-310 (311)
103 3dkr_A Esterase D; alpha beta 99.8 2.4E-17 8.2E-22 172.1 20.5 204 670-898 22-249 (251)
104 1nr0_A Actin interacting prote 99.8 4.1E-16 1.4E-20 186.1 33.6 369 110-563 105-569 (611)
105 3cn9_A Carboxylesterase; alpha 99.7 1.4E-16 4.7E-21 164.0 23.7 185 668-898 22-226 (226)
106 2h1i_A Carboxylesterase; struc 99.7 1.5E-16 5.2E-21 163.6 23.8 181 669-898 37-226 (226)
107 3iii_A COCE/NOND family hydrol 99.7 1.4E-17 4.8E-22 192.1 17.7 248 637-902 39-324 (560)
108 3d0k_A Putative poly(3-hydroxy 99.7 1.7E-17 5.8E-22 179.4 17.2 228 639-898 24-288 (304)
109 3bdi_A Uncharacterized protein 99.7 1.4E-16 4.7E-21 161.2 22.4 198 639-896 4-206 (207)
110 3ow8_A WD repeat-containing pr 99.7 5.6E-16 1.9E-20 168.8 28.8 268 110-528 34-309 (321)
111 1nr0_A Actin interacting prote 99.7 1.8E-15 6E-20 180.6 35.4 329 110-624 20-361 (611)
112 3u0v_A Lysophospholipase-like 99.7 1.3E-16 4.5E-21 165.6 22.4 189 669-900 22-233 (239)
113 1vkh_A Putative serine hydrola 99.7 7.6E-18 2.6E-22 179.1 12.1 200 668-894 39-272 (273)
114 3d7r_A Esterase; alpha/beta fo 99.7 4.3E-17 1.5E-21 178.0 18.1 216 652-899 84-323 (326)
115 3rm3_A MGLP, thermostable mono 99.7 2E-16 6.7E-21 167.6 22.5 202 670-898 40-269 (270)
116 4g56_B MGC81050 protein; prote 99.7 1.6E-16 5.4E-21 176.0 22.2 284 110-528 44-331 (357)
117 3b5e_A MLL8374 protein; NP_108 99.7 2.4E-16 8.4E-21 161.7 21.7 196 648-898 14-217 (223)
118 4f0j_A Probable hydrolytic enz 99.7 4E-16 1.4E-20 169.0 23.9 227 638-896 19-313 (315)
119 2r8b_A AGR_C_4453P, uncharacte 99.7 1.6E-16 5.6E-21 166.4 20.0 180 669-899 61-249 (251)
120 3zwl_B Eukaryotic translation 99.7 1.6E-15 5.4E-20 168.2 29.1 287 110-563 34-348 (369)
121 1sfr_A Antigen 85-A; alpha/bet 99.7 1.6E-16 5.6E-21 171.3 20.3 238 638-900 8-285 (304)
122 1r5m_A SIR4-interacting protei 99.7 2.7E-15 9.3E-20 169.9 31.0 282 109-563 46-363 (425)
123 3iuj_A Prolyl endopeptidase; h 99.7 2.3E-15 8E-20 181.9 32.1 273 190-571 130-415 (693)
124 1gkl_A Endo-1,4-beta-xylanase 99.7 1.2E-15 4E-20 163.5 25.9 208 637-877 39-272 (297)
125 3vgz_A Uncharacterized protein 99.7 8.4E-15 2.9E-19 161.6 33.1 275 191-604 43-334 (353)
126 4ezi_A Uncharacterized protein 99.7 1.4E-15 4.7E-20 167.2 26.2 245 636-901 40-373 (377)
127 3nuz_A Putative acetyl xylan e 99.7 9.9E-17 3.4E-21 179.7 17.4 222 634-871 87-346 (398)
128 1tht_A Thioesterase; 2.10A {Vi 99.7 6.8E-16 2.3E-20 166.2 23.1 229 640-898 8-265 (305)
129 1r88_A MPT51/MPB51 antigen; AL 99.7 2.7E-16 9.2E-21 167.3 19.6 237 636-899 8-274 (280)
130 3u4y_A Uncharacterized protein 99.7 6.8E-15 2.3E-19 160.9 31.4 277 163-567 20-310 (331)
131 3fm0_A Protein CIAO1; WDR39,SG 99.7 1.5E-15 5.1E-20 167.4 26.1 286 110-563 18-337 (345)
132 3bws_A Protein LP49; two-domai 99.7 1.3E-14 4.4E-19 165.2 33.9 305 189-617 123-431 (433)
133 3vgz_A Uncharacterized protein 99.7 8.1E-15 2.8E-19 161.7 30.9 283 111-529 43-333 (353)
134 3vl1_A 26S proteasome regulato 99.7 7.9E-15 2.7E-19 166.2 31.4 279 111-528 59-353 (420)
135 2gop_A Trilobed protease; beta 99.7 2.7E-15 9.2E-20 165.4 26.7 275 190-626 16-299 (347)
136 2qru_A Uncharacterized protein 99.7 8.6E-16 2.9E-20 163.1 21.8 218 644-896 9-273 (274)
137 2qm0_A BES; alpha-beta structu 99.7 1.5E-16 5.1E-21 168.9 15.5 226 636-894 15-272 (275)
138 3g8y_A SUSD/RAGB-associated es 99.7 2.7E-16 9.2E-21 175.8 18.3 153 635-795 83-260 (391)
139 2pm9_A Protein WEB1, protein t 99.7 1.1E-15 3.8E-20 172.9 23.6 307 107-564 11-340 (416)
140 4gqb_B Methylosome protein 50; 99.7 2E-15 6.8E-20 165.9 24.0 231 190-528 84-318 (344)
141 2fx5_A Lipase; alpha-beta hydr 99.7 6.4E-16 2.2E-20 162.6 19.1 188 654-901 34-231 (258)
142 2qjw_A Uncharacterized protein 99.7 4.9E-16 1.7E-20 152.8 17.0 172 670-896 4-175 (176)
143 1qlw_A Esterase; anisotropic r 99.7 7.8E-16 2.7E-20 167.9 20.1 127 743-899 186-322 (328)
144 1l0q_A Surface layer protein; 99.7 1.3E-14 4.3E-19 162.8 30.4 240 111-491 34-276 (391)
145 2j04_A TAU60, YPL007P, hypothe 99.7 1.5E-16 5.3E-21 179.2 14.4 309 110-603 17-350 (588)
146 3ia2_A Arylesterase; alpha-bet 99.7 1.7E-15 6E-20 160.4 21.9 213 643-895 2-270 (271)
147 3d59_A Platelet-activating fac 99.7 1.1E-15 3.8E-20 170.8 21.2 186 668-901 96-353 (383)
148 1got_B GT-beta; complex (GTP-b 99.7 1.2E-14 4E-19 159.8 28.6 263 110-528 57-331 (340)
149 3hfq_A Uncharacterized protein 99.7 7.5E-15 2.6E-19 161.8 26.7 284 164-569 17-327 (347)
150 3sfz_A APAF-1, apoptotic pepti 99.7 2.7E-14 9.1E-19 185.6 35.4 278 110-528 617-901 (1249)
151 1a88_A Chloroperoxidase L; hal 99.7 3.5E-15 1.2E-19 158.4 22.2 214 644-895 3-274 (275)
152 3u4y_A Uncharacterized protein 99.7 4.7E-14 1.6E-18 154.1 31.9 296 194-622 3-308 (331)
153 3sfz_A APAF-1, apoptotic pepti 99.7 7E-15 2.4E-19 191.1 29.7 378 110-621 800-1210(1249)
154 1vyh_C Platelet-activating fac 99.7 1.7E-14 5.7E-19 163.0 29.0 279 110-528 110-399 (410)
155 4g56_B MGC81050 protein; prote 99.7 1.4E-14 4.9E-19 160.2 27.4 289 189-618 43-343 (357)
156 3mkq_A Coatomer beta'-subunit; 99.7 2.6E-14 9E-19 176.9 33.0 263 110-524 15-285 (814)
157 1zoi_A Esterase; alpha/beta hy 99.7 2.6E-15 9E-20 159.6 20.6 214 644-895 4-275 (276)
158 2xzm_R RACK1; ribosome, transl 99.7 3.4E-14 1.2E-18 156.3 30.1 270 110-528 23-328 (343)
159 2y6u_A Peroxisomal membrane pr 99.7 6.5E-16 2.2E-20 174.0 16.4 234 644-902 25-349 (398)
160 3vdx_A Designed 16NM tetrahedr 99.7 7E-15 2.4E-19 167.9 24.9 222 639-900 3-282 (456)
161 1tqh_A Carboxylesterase precur 99.7 2E-15 6.8E-20 157.6 18.5 200 670-896 16-244 (247)
162 3bws_A Protein LP49; two-domai 99.7 2.7E-14 9.4E-19 162.5 29.5 258 164-528 145-419 (433)
163 1pby_B Quinohemoprotein amine 99.7 5.2E-14 1.8E-18 153.9 30.6 289 163-569 11-318 (337)
164 1erj_A Transcriptional repress 99.7 2.9E-14 9.8E-19 160.2 29.1 239 190-528 125-377 (393)
165 3zwl_B Eukaryotic translation 99.7 3.1E-14 1E-18 157.8 29.0 318 178-619 24-347 (369)
166 2ocg_A Valacyclovir hydrolase; 99.7 3.5E-15 1.2E-19 156.5 19.9 211 648-894 10-253 (254)
167 1gxr_A ESG1, transducin-like e 99.6 1.8E-14 6.1E-19 157.5 26.3 267 110-486 53-335 (337)
168 4aez_A CDC20, WD repeat-contai 99.6 5.3E-14 1.8E-18 158.5 30.5 267 163-565 113-384 (401)
169 3ow8_A WD repeat-containing pr 99.6 1.2E-13 4.1E-18 150.3 31.9 277 189-616 33-319 (321)
170 4fle_A Esterase; structural ge 99.6 6.9E-16 2.4E-20 155.7 13.1 183 670-895 2-190 (202)
171 3scy_A Hypothetical bacterial 99.6 3.7E-14 1.3E-18 157.2 28.2 284 163-568 27-346 (361)
172 1a8s_A Chloroperoxidase F; hal 99.6 7.7E-15 2.7E-19 155.6 21.6 212 644-895 3-272 (273)
173 3r0v_A Alpha/beta hydrolase fo 99.6 8.9E-15 3.1E-19 153.7 21.8 206 643-895 6-261 (262)
174 1nir_A Nitrite reductase; hemo 99.6 1.7E-13 5.9E-18 159.8 34.8 321 163-623 159-519 (543)
175 1imj_A CIB, CCG1-interacting f 99.6 2.7E-16 9.4E-21 159.5 9.7 189 648-896 15-208 (210)
176 4h5i_A Guanine nucleotide-exch 99.6 1.2E-14 4E-19 161.4 23.7 202 190-488 135-343 (365)
177 4ery_A WD repeat-containing pr 99.6 1.1E-13 3.6E-18 150.0 30.5 267 110-528 25-298 (312)
178 2yys_A Proline iminopeptidase- 99.6 4E-15 1.4E-19 159.1 18.9 214 642-897 5-276 (286)
179 1dqz_A 85C, protein (antigen 8 99.6 3.1E-15 1.1E-19 159.4 17.8 235 638-899 5-279 (280)
180 3u1t_A DMMA haloalkane dehalog 99.6 3.7E-15 1.3E-19 160.8 18.6 213 648-901 17-300 (309)
181 1r5m_A SIR4-interacting protei 99.6 1.7E-14 5.8E-19 163.3 24.9 269 110-528 110-413 (425)
182 4f21_A Carboxylesterase/phosph 99.6 6.8E-15 2.3E-19 152.2 19.7 132 740-899 114-245 (246)
183 3qit_A CURM TE, polyketide syn 99.6 4.4E-15 1.5E-19 157.9 18.8 201 647-887 11-280 (286)
184 3frx_A Guanine nucleotide-bind 99.6 4.3E-14 1.5E-18 153.7 27.0 273 110-528 19-305 (319)
185 3fob_A Bromoperoxidase; struct 99.6 1.5E-14 5E-19 154.3 22.9 210 645-895 12-280 (281)
186 1a8q_A Bromoperoxidase A1; hal 99.6 2E-14 6.9E-19 152.5 23.7 213 644-895 3-273 (274)
187 3om8_A Probable hydrolase; str 99.6 9.7E-15 3.3E-19 154.3 20.9 212 643-895 8-265 (266)
188 3s25_A Hypothetical 7-bladed b 99.6 2E-14 6.9E-19 153.0 23.3 282 194-626 19-301 (302)
189 1mtz_A Proline iminopeptidase; 99.6 4.6E-15 1.6E-19 159.2 18.4 213 647-897 12-292 (293)
190 1k8k_C P40, ARP2/3 complex 41 99.6 3.4E-14 1.2E-18 157.8 26.0 236 110-488 10-274 (372)
191 4gqb_B Methylosome protein 50; 99.6 9.1E-14 3.1E-18 152.6 28.9 219 314-619 103-332 (344)
192 1ri6_A Putative isomerase YBHE 99.6 2.1E-13 7.3E-18 149.4 31.8 262 163-528 15-295 (343)
193 3hfq_A Uncharacterized protein 99.6 1.2E-13 4E-18 152.2 29.0 301 217-626 16-327 (347)
194 3c8d_A Enterochelin esterase; 99.6 3E-15 1E-19 167.2 15.9 225 637-898 166-398 (403)
195 3oos_A Alpha/beta hydrolase fa 99.6 4.9E-15 1.7E-19 157.0 16.8 205 648-894 11-278 (278)
196 1q0r_A RDMC, aclacinomycin met 99.6 1.3E-14 4.6E-19 156.1 20.4 210 647-898 8-294 (298)
197 3dqz_A Alpha-hydroxynitrIle ly 99.6 4E-15 1.4E-19 156.1 15.6 198 671-898 5-258 (258)
198 3e0x_A Lipase-esterase related 99.6 4.2E-15 1.5E-19 154.3 15.5 195 670-894 16-245 (245)
199 1brt_A Bromoperoxidase A2; hal 99.6 1.6E-14 5.5E-19 153.6 20.3 209 646-895 9-276 (277)
200 2ynn_A Coatomer subunit beta'; 99.6 1E-13 3.5E-18 149.6 26.9 266 110-527 15-290 (304)
201 4e54_B DNA damage-binding prot 99.6 5.2E-14 1.8E-18 160.4 25.7 294 110-565 121-434 (435)
202 2r11_A Carboxylesterase NP; 26 99.6 8.4E-15 2.9E-19 158.3 17.9 216 640-895 46-305 (306)
203 3v48_A Aminohydrolase, putativ 99.6 1.5E-14 5.3E-19 152.9 19.5 198 670-899 15-262 (268)
204 4dnp_A DAD2; alpha/beta hydrol 99.6 6.4E-15 2.2E-19 155.3 16.4 196 670-896 20-268 (269)
205 2gzs_A IROE protein; enterobac 99.6 5.3E-15 1.8E-19 156.8 15.6 208 637-877 11-249 (278)
206 2pl5_A Homoserine O-acetyltran 99.6 2.5E-14 8.7E-19 158.8 21.8 234 648-897 29-365 (366)
207 3qvm_A OLEI00960; structural g 99.6 3.5E-15 1.2E-19 158.5 14.2 197 670-898 28-279 (282)
208 4h5i_A Guanine nucleotide-exch 99.6 2.2E-13 7.6E-18 151.1 29.3 204 333-618 135-343 (365)
209 3i28_A Epoxide hydrolase 2; ar 99.6 8.3E-15 2.9E-19 172.6 18.7 221 639-900 237-548 (555)
210 3s25_A Hypothetical 7-bladed b 99.6 2.1E-13 7.2E-18 145.1 27.4 256 114-528 19-280 (302)
211 1got_B GT-beta; complex (GTP-b 99.6 3.3E-13 1.1E-17 148.2 30.0 273 179-601 48-330 (340)
212 2xe4_A Oligopeptidase B; hydro 99.6 1.1E-13 3.9E-18 168.1 28.8 264 190-571 175-468 (751)
213 3ei3_B DNA damage-binding prot 99.6 1.9E-13 6.6E-18 152.7 28.6 275 110-528 75-371 (383)
214 3hss_A Putative bromoperoxidas 99.6 8.5E-15 2.9E-19 156.9 16.8 197 670-896 43-290 (293)
215 3guu_A Lipase A; protein struc 99.6 6.2E-14 2.1E-18 155.9 24.0 249 638-901 74-409 (462)
216 1pby_B Quinohemoprotein amine 99.6 3.4E-13 1.2E-17 147.3 29.8 275 218-623 10-315 (337)
217 1erj_A Transcriptional repress 99.6 2.9E-13 9.9E-18 151.9 29.5 253 189-570 65-350 (393)
218 3i2n_A WD repeat-containing pr 99.6 8.1E-14 2.8E-18 153.8 24.6 275 110-527 20-339 (357)
219 3sty_A Methylketone synthase 1 99.6 1.2E-14 4E-19 153.3 16.4 198 670-897 12-266 (267)
220 3vl1_A 26S proteasome regulato 99.6 8.3E-13 2.8E-17 149.5 32.8 257 113-488 102-365 (420)
221 3fm0_A Protein CIAO1; WDR39,SG 99.6 3.6E-13 1.2E-17 148.2 28.7 230 190-528 18-271 (345)
222 3kxp_A Alpha-(N-acetylaminomet 99.6 3E-14 1E-18 154.5 19.5 208 647-896 55-314 (314)
223 1ri6_A Putative isomerase YBHE 99.6 2.7E-13 9.3E-18 148.6 27.3 257 110-491 39-311 (343)
224 2xua_A PCAD, 3-oxoadipate ENOL 99.6 3.8E-14 1.3E-18 149.7 19.6 211 647-896 9-264 (266)
225 3h2g_A Esterase; xanthomonas o 99.6 2.6E-14 9.1E-19 160.4 19.4 151 637-796 44-211 (397)
226 3nwo_A PIP, proline iminopepti 99.6 3.3E-14 1.1E-18 155.4 19.2 215 648-898 36-323 (330)
227 3fsg_A Alpha/beta superfamily 99.6 1.1E-14 3.6E-19 153.9 14.6 211 648-898 9-269 (272)
228 2pbi_B Guanine nucleotide-bind 99.6 1.4E-13 4.8E-18 152.1 24.2 271 110-484 66-353 (354)
229 1nir_A Nitrite reductase; hemo 99.6 8.5E-13 2.9E-17 153.9 31.9 310 111-570 181-523 (543)
230 3iz6_a 40S ribosomal protein R 99.6 2.3E-13 7.7E-18 152.0 25.9 278 110-563 68-377 (380)
231 3dw8_B Serine/threonine-protei 99.6 2.7E-13 9.1E-18 154.9 27.1 252 110-491 30-374 (447)
232 4ery_A WD repeat-containing pr 99.6 1.8E-12 6.3E-17 140.2 32.2 269 189-602 24-298 (312)
233 1hkh_A Gamma lactamase; hydrol 99.6 2.8E-14 9.6E-19 151.8 17.5 194 671-895 24-278 (279)
234 3i1i_A Homoserine O-acetyltran 99.6 1.3E-14 4.6E-19 161.5 15.5 71 825-898 302-373 (377)
235 1wm1_A Proline iminopeptidase; 99.6 6.5E-14 2.2E-18 152.1 19.9 214 642-894 17-315 (317)
236 1c4x_A BPHD, protein (2-hydrox 99.6 4.1E-14 1.4E-18 151.2 17.9 215 645-896 12-284 (285)
237 2ynn_A Coatomer subunit beta'; 99.6 1.6E-12 5.4E-17 140.2 30.6 254 179-570 6-268 (304)
238 1vyh_C Platelet-activating fac 99.6 8.3E-13 2.8E-17 149.0 29.3 265 189-600 109-397 (410)
239 2vdu_B TRNA (guanine-N(7)-)-me 99.6 6E-13 2.1E-17 152.3 28.5 193 190-486 104-337 (450)
240 2pbi_B Guanine nucleotide-bind 99.6 1.3E-12 4.4E-17 144.3 29.8 276 179-601 57-344 (354)
241 2puj_A 2-hydroxy-6-OXO-6-pheny 99.6 7.1E-14 2.4E-18 149.4 19.0 174 706-896 58-285 (286)
242 2qs9_A Retinoblastoma-binding 99.6 5.6E-14 1.9E-18 140.5 17.1 183 670-899 4-187 (194)
243 4g9e_A AHL-lactonase, alpha/be 99.6 4.7E-15 1.6E-19 157.3 9.6 220 639-900 3-272 (279)
244 3ei3_B DNA damage-binding prot 99.6 4.7E-12 1.6E-16 141.4 34.5 300 189-618 74-382 (383)
245 1azw_A Proline iminopeptidase; 99.5 8.5E-14 2.9E-18 150.9 18.8 120 641-793 13-136 (313)
246 2e3j_A Epoxide hydrolase EPHB; 99.5 5.5E-14 1.9E-18 155.5 17.6 118 647-794 10-131 (356)
247 2b61_A Homoserine O-acetyltran 99.5 1.1E-13 3.7E-18 154.4 20.1 178 708-896 94-376 (377)
248 3iz6_a 40S ribosomal protein R 99.5 2.8E-12 9.5E-17 143.1 31.0 304 180-619 60-376 (380)
249 3mkq_A Coatomer beta'-subunit; 99.5 1.3E-12 4.3E-17 161.8 31.0 253 179-569 6-267 (814)
250 3dwl_C Actin-related protein 2 99.5 7E-14 2.4E-18 155.9 17.7 236 110-474 13-270 (377)
251 2cjp_A Epoxide hydrolase; HET: 99.5 1.5E-13 5E-18 150.2 19.7 117 645-793 16-138 (328)
252 2rau_A Putative esterase; NP_3 99.5 6.7E-14 2.3E-18 154.7 17.2 180 703-897 84-353 (354)
253 2pm9_A Protein WEB1, protein t 99.5 4.5E-13 1.6E-17 151.3 24.4 297 190-620 14-339 (416)
254 1sq9_A Antiviral protein SKI8; 99.5 6E-13 2.1E-17 149.3 25.1 247 110-491 18-323 (397)
255 3g9x_A Haloalkane dehalogenase 99.5 5.6E-14 1.9E-18 150.7 15.8 209 648-896 18-292 (299)
256 1iup_A META-cleavage product h 99.5 4.5E-13 1.5E-17 142.8 22.7 211 647-896 12-272 (282)
257 2wue_A 2-hydroxy-6-OXO-6-pheny 99.5 2E-13 6.8E-18 146.3 19.8 213 646-895 19-288 (291)
258 4gga_A P55CDC, cell division c 99.5 4.3E-12 1.5E-16 143.8 31.8 252 163-528 125-383 (420)
259 1j1i_A META cleavage compound 99.5 3.5E-13 1.2E-17 144.7 21.1 215 647-899 23-284 (296)
260 4ggc_A P55CDC, cell division c 99.5 3.4E-12 1.2E-16 138.2 29.1 254 163-528 45-303 (318)
261 2oaj_A Protein SNI1; WD40 repe 99.5 5.6E-12 1.9E-16 156.3 34.6 190 110-378 19-245 (902)
262 1uxo_A YDEN protein; hydrolase 99.5 6.1E-14 2.1E-18 140.0 13.8 183 670-899 4-188 (192)
263 1wom_A RSBQ, sigma factor SIGB 99.5 7E-14 2.4E-18 148.1 15.0 196 670-897 20-270 (271)
264 3bf7_A Esterase YBFF; thioeste 99.5 1.4E-13 4.8E-18 144.3 16.8 196 670-897 16-255 (255)
265 3frx_A Guanine nucleotide-bind 99.5 2.3E-12 7.7E-17 140.1 26.7 284 189-618 18-317 (319)
266 2xmz_A Hydrolase, alpha/beta h 99.5 8.9E-14 3E-18 147.1 15.2 194 671-897 17-266 (269)
267 2d81_A PHB depolymerase; alpha 99.5 3.5E-14 1.2E-18 151.2 12.0 193 754-951 6-233 (318)
268 3scy_A Hypothetical bacterial 99.5 2.9E-12 1E-16 141.8 28.1 262 108-491 49-340 (361)
269 4aow_A Guanine nucleotide-bind 99.5 4.2E-12 1.4E-16 138.9 28.9 283 110-563 40-339 (340)
270 1jmx_B Amine dehydrogenase; ox 99.5 2.5E-12 8.5E-17 141.3 27.0 305 113-568 4-332 (349)
271 1xkl_A SABP2, salicylic acid-b 99.5 3E-13 1E-17 143.3 18.7 199 670-898 4-260 (273)
272 2xt0_A Haloalkane dehalogenase 99.5 3.5E-13 1.2E-17 144.8 19.4 208 650-895 33-296 (297)
273 1yfq_A Cell cycle arrest prote 99.5 1.5E-12 5.2E-17 142.6 24.8 267 110-530 13-313 (342)
274 1b6g_A Haloalkane dehalogenase 99.5 2.7E-13 9.1E-18 146.7 18.3 207 650-896 34-308 (310)
275 3p2m_A Possible hydrolase; alp 99.5 5.9E-14 2E-18 153.4 13.2 205 649-896 69-329 (330)
276 2qvb_A Haloalkane dehalogenase 99.5 1.5E-13 5E-18 147.3 15.9 209 646-898 14-293 (297)
277 3r40_A Fluoroacetate dehalogen 99.5 2.1E-13 7.1E-18 146.7 17.2 210 646-897 19-303 (306)
278 1pgu_A Actin interacting prote 99.5 2.4E-12 8.2E-17 153.6 28.1 297 110-568 20-335 (615)
279 2xzm_R RACK1; ribosome, transl 99.5 4.3E-12 1.5E-16 139.4 27.8 291 189-619 22-341 (343)
280 2wfl_A Polyneuridine-aldehyde 99.5 3.4E-13 1.2E-17 142.2 18.1 196 670-895 10-263 (264)
281 3k26_A Polycomb protein EED; W 99.5 1.7E-12 5.7E-17 143.6 24.1 260 164-528 45-354 (366)
282 2aq5_A Coronin-1A; WD40 repeat 99.5 2.3E-12 7.7E-17 145.1 25.5 271 163-567 57-348 (402)
283 3bwx_A Alpha/beta hydrolase; Y 99.5 5.7E-13 1.9E-17 142.2 19.6 216 640-896 6-284 (285)
284 1u2e_A 2-hydroxy-6-ketonona-2, 99.5 3.8E-13 1.3E-17 143.9 18.0 173 706-895 61-287 (289)
285 3gff_A IROE-like serine hydrol 99.5 9.9E-14 3.4E-18 149.7 13.2 222 637-899 10-267 (331)
286 1ycd_A Hypothetical 27.3 kDa p 99.5 2.6E-14 9E-19 148.7 8.4 208 670-900 5-240 (243)
287 2q0x_A Protein DUF1749, unchar 99.5 3E-13 1E-17 147.7 16.9 221 640-899 16-296 (335)
288 1mj5_A 1,3,4,6-tetrachloro-1,4 99.5 3E-13 1E-17 145.3 16.8 211 645-899 14-295 (302)
289 4e54_B DNA damage-binding prot 99.5 3E-12 1E-16 145.7 25.9 304 189-622 120-434 (435)
290 3dw8_B Serine/threonine-protei 99.5 1.5E-11 5.1E-16 140.3 31.4 176 332-569 178-381 (447)
291 1m33_A BIOH protein; alpha-bet 99.5 1.6E-13 5.6E-18 144.0 13.7 190 672-896 15-255 (258)
292 3pic_A CIP2; alpha/beta hydrol 99.5 1.3E-12 4.5E-17 137.9 20.3 213 650-902 90-349 (375)
293 3dm0_A Maltose-binding peripla 99.5 4.5E-12 1.6E-16 153.6 28.2 217 163-490 405-632 (694)
294 3fla_A RIFR; alpha-beta hydrol 99.5 4.2E-13 1.4E-17 141.4 16.7 198 669-899 19-251 (267)
295 3c6x_A Hydroxynitrilase; atomi 99.5 2.7E-13 9.2E-18 142.3 15.0 197 671-897 4-256 (257)
296 4g4g_A 4-O-methyl-glucuronoyl 99.5 2.1E-12 7.3E-17 137.5 21.8 212 651-903 124-384 (433)
297 3bdv_A Uncharacterized protein 99.5 5.6E-13 1.9E-17 132.8 16.4 128 736-897 58-187 (191)
298 2vat_A Acetyl-COA--deacetylcep 99.5 3.8E-13 1.3E-17 153.6 16.7 68 824-898 375-443 (444)
299 1sq9_A Antiviral protein SKI8; 99.5 2E-11 6.7E-16 136.9 29.8 251 189-569 17-330 (397)
300 1isp_A Lipase; alpha/beta hydr 99.5 1.3E-12 4.4E-17 128.9 17.3 169 670-897 3-176 (181)
301 4aez_A CDC20, WD repeat-contai 99.5 3.8E-11 1.3E-15 135.0 31.6 282 190-621 95-383 (401)
302 4fol_A FGH, S-formylglutathion 99.5 1.5E-12 5.1E-17 138.0 18.7 245 638-899 13-297 (299)
303 3kda_A CFTR inhibitory factor 99.5 5.7E-13 1.9E-17 143.1 15.8 208 646-897 16-294 (301)
304 1pja_A Palmitoyl-protein thioe 99.5 7.1E-13 2.4E-17 142.7 16.5 196 670-894 36-301 (302)
305 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.1E-11 3.9E-16 137.3 26.5 275 164-528 15-328 (365)
306 3afi_E Haloalkane dehalogenase 99.5 2E-12 6.9E-17 140.2 19.9 212 648-899 15-303 (316)
307 3i2n_A WD repeat-containing pr 99.4 5E-12 1.7E-16 139.3 23.3 302 189-619 19-354 (357)
308 2vdu_B TRNA (guanine-N(7)-)-me 99.4 3E-11 1E-15 138.2 30.3 214 332-625 150-399 (450)
309 1yfq_A Cell cycle arrest prote 99.4 1.8E-11 6.2E-16 134.0 26.7 245 189-569 12-290 (342)
310 3dwl_C Actin-related protein 2 99.4 7E-13 2.4E-17 147.7 15.5 229 190-528 13-270 (377)
311 1k8k_C P40, ARP2/3 complex 41 99.4 5.2E-12 1.8E-16 140.1 22.4 226 189-527 9-262 (372)
312 1ehy_A Protein (soluble epoxid 99.4 5E-12 1.7E-16 135.5 21.5 206 647-894 16-293 (294)
313 2pm7_B Protein transport prote 99.4 1.5E-11 5.1E-16 132.0 25.2 247 110-490 11-287 (297)
314 2hes_X YDR267CP; beta-propelle 99.4 1.2E-11 4.3E-16 134.9 24.6 271 110-528 16-316 (330)
315 4aow_A Guanine nucleotide-bind 99.4 7.4E-11 2.5E-15 128.9 30.7 298 181-620 33-339 (340)
316 1jmx_B Amine dehydrogenase; ox 99.4 4.7E-11 1.6E-15 131.0 29.2 289 193-622 4-329 (349)
317 3ibt_A 1H-3-hydroxy-4-oxoquino 99.4 1.4E-12 4.8E-17 137.1 16.1 209 648-895 7-263 (264)
318 4a11_B DNA excision repair pro 99.4 2.7E-11 9.1E-16 136.1 27.6 298 110-565 45-369 (408)
319 3odt_A Protein DOA1; ubiquitin 99.4 3.6E-11 1.2E-15 129.6 26.2 274 110-565 20-300 (313)
320 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.2E-11 7.5E-16 135.0 24.7 262 110-488 41-341 (365)
321 2qmq_A Protein NDRG2, protein 99.4 3.3E-12 1.1E-16 136.2 17.3 214 648-895 19-285 (286)
322 1pgu_A Actin interacting prote 99.4 7.4E-11 2.5E-15 140.6 30.6 285 189-620 19-330 (615)
323 2j04_A TAU60, YPL007P, hypothe 99.4 1E-12 3.5E-17 148.2 12.9 233 109-475 86-350 (588)
324 2aq5_A Coronin-1A; WD40 repeat 99.4 3.6E-11 1.2E-15 135.2 25.9 291 191-624 37-348 (402)
325 1qe3_A PNB esterase, para-nitr 99.4 1.8E-13 6.2E-18 156.2 6.5 211 651-879 82-316 (489)
326 3qmv_A Thioesterase, REDJ; alp 99.4 3.7E-13 1.3E-17 143.3 7.8 192 671-893 52-279 (280)
327 3jrp_A Fusion protein of prote 99.4 2.9E-11 1E-15 134.2 23.7 243 110-490 13-289 (379)
328 2psd_A Renilla-luciferin 2-mon 99.4 3.8E-12 1.3E-16 138.2 15.9 209 647-898 28-306 (318)
329 2j04_B YDR362CP, TAU91; beta p 99.4 5.4E-11 1.8E-15 137.5 26.5 248 109-476 134-418 (524)
330 3vu4_A KMHSV2; beta-propeller 99.4 4.3E-11 1.5E-15 132.0 24.3 241 110-488 21-271 (355)
331 3bg1_A Protein SEC13 homolog; 99.4 2.3E-11 7.8E-16 131.9 21.6 245 110-490 15-295 (316)
332 1r3d_A Conserved hypothetical 99.4 4.8E-12 1.6E-16 133.3 15.3 193 670-897 16-262 (264)
333 3mmy_A MRNA export factor; mRN 99.4 7.1E-11 2.4E-15 130.4 25.5 266 110-529 41-335 (368)
334 3odt_A Protein DOA1; ubiquitin 99.4 1.8E-10 6E-15 124.1 28.0 273 189-621 19-299 (313)
335 3dm0_A Maltose-binding peripla 99.4 1.9E-10 6.5E-15 139.3 31.3 298 181-616 377-691 (694)
336 3b12_A Fluoroacetate dehalogen 99.0 8.2E-14 2.8E-18 149.8 0.0 197 670-898 25-293 (304)
337 3jrp_A Fusion protein of prote 99.3 9.4E-11 3.2E-15 130.1 24.5 231 189-528 12-275 (379)
338 2pm7_B Protein transport prote 99.3 1.2E-10 4E-15 125.0 24.3 227 189-528 10-273 (297)
339 3f3f_A Nucleoporin SEH1; struc 99.3 5.4E-11 1.8E-15 130.0 21.7 103 110-261 13-130 (351)
340 3l80_A Putative uncharacterize 99.3 1.3E-12 4.3E-17 139.9 8.1 168 710-897 67-289 (292)
341 2oaj_A Protein SNI1; WD40 repe 99.3 3.6E-10 1.2E-14 140.0 31.3 169 332-566 436-669 (902)
342 4gga_A P55CDC, cell division c 99.3 9E-10 3.1E-14 124.5 31.4 281 190-619 107-396 (420)
343 3k26_A Polycomb protein EED; W 99.3 1.8E-10 6.2E-15 127.1 24.0 289 189-617 19-365 (366)
344 4a11_B DNA excision repair pro 99.3 1.2E-09 4.1E-14 122.5 30.9 292 188-621 43-368 (408)
345 3v7d_B Cell division control p 99.3 1.5E-09 5.1E-14 124.4 30.9 256 163-566 142-426 (464)
346 1qks_A Cytochrome CD1 nitrite 99.3 6.1E-09 2.1E-13 121.0 35.7 324 163-623 177-543 (567)
347 2xyi_A Probable histone-bindin 99.3 3.3E-10 1.1E-14 128.6 23.1 243 109-487 129-409 (430)
348 3bg1_A Protein SEC13 homolog; 99.3 2.1E-10 7.1E-15 124.3 20.6 242 189-528 14-281 (316)
349 4i19_A Epoxide hydrolase; stru 99.3 1.1E-10 3.7E-15 129.7 18.6 117 647-793 75-203 (388)
350 2wj6_A 1H-3-hydroxy-4-oxoquina 99.2 1.1E-10 3.9E-15 123.5 17.8 214 647-897 11-272 (276)
351 2hes_X YDR267CP; beta-propelle 99.2 6.4E-10 2.2E-14 121.2 23.7 238 110-486 60-326 (330)
352 2oiz_A Aromatic amine dehydrog 99.2 1.2E-09 4.1E-14 120.5 25.6 131 336-491 204-335 (361)
353 2mad_H Methylamine dehydrogena 99.2 1.1E-08 3.8E-13 112.8 33.4 283 164-567 48-356 (373)
354 3gre_A Serine/threonine-protei 99.2 5.7E-10 1.9E-14 126.8 23.7 244 110-491 65-360 (437)
355 2mad_H Methylamine dehydrogena 99.2 1.8E-09 6.2E-14 119.2 26.8 135 335-491 216-351 (373)
356 3lcr_A Tautomycetin biosynthet 99.2 2.6E-10 9E-15 123.2 17.9 179 704-898 102-303 (319)
357 3qyj_A ALR0039 protein; alpha/ 99.2 7.9E-10 2.7E-14 118.0 21.3 208 647-896 12-290 (291)
358 3jro_A Fusion protein of prote 99.2 2.1E-10 7.2E-15 139.9 18.7 239 110-487 11-284 (753)
359 4ggc_A P55CDC, cell division c 99.2 1.1E-08 3.7E-13 110.3 30.4 280 191-618 28-315 (318)
360 3c5v_A PME-1, protein phosphat 99.2 6.5E-10 2.2E-14 120.3 20.5 196 670-897 38-300 (316)
361 3fle_A SE_1780 protein; struct 99.2 5.1E-10 1.8E-14 115.1 18.3 153 737-895 77-248 (249)
362 1qks_A Cytochrome CD1 nitrite 99.2 1.3E-08 4.5E-13 118.2 31.6 317 112-569 200-546 (567)
363 3mmy_A MRNA export factor; mRN 99.2 2.3E-09 7.7E-14 118.2 24.3 268 189-604 40-336 (368)
364 2xyi_A Probable histone-bindin 99.2 4.1E-09 1.4E-13 119.4 26.5 233 188-528 128-397 (430)
365 3jro_A Fusion protein of prote 99.2 5.1E-10 1.8E-14 136.5 20.1 232 189-528 10-273 (753)
366 2dg1_A DRP35, lactonase; beta 99.2 2.8E-09 9.6E-14 116.1 24.0 238 164-490 67-316 (333)
367 3ds8_A LIN2722 protein; unkonw 99.2 6.2E-10 2.1E-14 116.0 17.8 154 735-898 72-243 (254)
368 3e5z_A Putative gluconolactona 99.2 2.6E-09 8.9E-14 114.3 22.9 251 112-491 31-287 (296)
369 2oiz_A Aromatic amine dehydrog 99.1 2.9E-08 1E-12 109.3 31.4 282 163-567 31-342 (361)
370 3sjl_D Methylamine dehydrogena 99.1 2.3E-08 7.8E-13 108.8 29.4 282 163-572 59-374 (386)
371 3c75_H MADH, methylamine dehyd 99.1 7.4E-09 2.5E-13 114.8 26.0 134 336-491 269-403 (426)
372 3sjl_D Methylamine dehydrogena 99.1 7.4E-09 2.5E-13 112.6 25.3 270 113-491 82-364 (386)
373 1kez_A Erythronolide synthase; 99.1 3.7E-10 1.3E-14 121.2 14.9 199 670-898 67-282 (300)
374 2dg1_A DRP35, lactonase; beta 99.1 5.3E-09 1.8E-13 114.0 24.2 236 190-529 46-299 (333)
375 3gre_A Serine/threonine-protei 99.1 2.1E-09 7.1E-14 122.1 20.9 199 189-491 64-293 (437)
376 3lp5_A Putative cell surface h 99.1 1.1E-09 3.9E-14 112.5 16.7 145 736-895 77-232 (250)
377 2j04_B YDR362CP, TAU91; beta p 99.1 2E-10 6.9E-15 132.7 12.4 274 110-489 209-518 (524)
378 3v7d_B Cell division control p 99.1 2.6E-08 8.9E-13 114.0 30.1 284 195-623 127-426 (464)
379 3lrv_A PRE-mRNA-splicing facto 99.1 6.2E-09 2.1E-13 114.0 23.8 239 114-490 42-294 (343)
380 1ukc_A ESTA, esterase; fungi, 99.1 1.8E-10 6.2E-15 132.4 11.5 208 652-878 86-327 (522)
381 2ghs_A AGR_C_1268P; regucalcin 99.1 8.3E-09 2.9E-13 112.0 23.8 233 113-477 53-293 (326)
382 2ovr_B FBW7, F-BOX/WD repeat p 99.1 1.2E-07 4.3E-12 107.7 34.6 311 115-618 124-442 (445)
383 3c75_H MADH, methylamine dehyd 99.1 2.1E-08 7.1E-13 111.2 26.6 283 164-568 100-409 (426)
384 3e5z_A Putative gluconolactona 99.1 2.7E-08 9.1E-13 106.3 26.7 246 190-565 29-290 (296)
385 3dr2_A Exported gluconolactona 99.1 1E-08 3.4E-13 110.2 22.1 252 112-488 48-304 (305)
386 3ils_A PKS, aflatoxin biosynth 99.1 1.4E-09 4.9E-14 114.2 14.8 197 670-894 21-264 (265)
387 3vu4_A KMHSV2; beta-propeller 99.0 1.1E-08 3.6E-13 112.7 21.8 231 189-563 20-273 (355)
388 3f3f_A Nucleoporin SEH1; struc 99.0 1.8E-08 6.2E-13 109.7 23.4 206 189-488 12-249 (351)
389 3g4e_A Regucalcin; six bladed 99.0 2.3E-08 7.8E-13 107.0 23.5 233 191-529 15-261 (297)
390 3g4e_A Regucalcin; six bladed 99.0 3E-08 1E-12 106.1 24.4 239 113-476 17-262 (297)
391 4gq1_A NUP37; propeller, trans 99.0 8.8E-09 3E-13 115.1 20.5 273 113-486 94-387 (393)
392 3g02_A Epoxide hydrolase; alph 99.0 5.2E-09 1.8E-13 116.5 17.3 212 648-898 93-397 (408)
393 3lrv_A PRE-mRNA-splicing facto 99.0 4.3E-08 1.5E-12 107.2 24.4 187 189-477 126-324 (343)
394 1tca_A Lipase; hydrolase(carbo 99.0 1.4E-09 4.8E-14 116.8 11.5 210 649-896 13-243 (317)
395 2h7c_A Liver carboxylesterase 99.0 7.8E-10 2.7E-14 127.9 10.0 132 646-795 95-233 (542)
396 2ghs_A AGR_C_1268P; regucalcin 98.9 8.6E-08 3E-12 103.9 23.2 226 191-528 51-290 (326)
397 2ogt_A Thermostable carboxyles 98.9 2.1E-09 7.2E-14 122.9 10.0 132 646-795 81-224 (498)
398 2ha2_A ACHE, acetylcholinester 98.9 1.4E-09 4.8E-14 125.8 7.8 132 646-794 93-232 (543)
399 4gq1_A NUP37; propeller, trans 98.9 6.4E-08 2.2E-12 108.1 20.3 237 192-528 93-378 (393)
400 3dr2_A Exported gluconolactona 98.9 3.4E-07 1.2E-11 98.1 25.3 228 314-616 67-304 (305)
401 1p22_A F-BOX/WD-repeat protein 98.9 3.7E-07 1.3E-11 103.4 26.6 220 114-486 137-363 (435)
402 1ei9_A Palmitoyl protein thioe 98.8 3.1E-08 1.1E-12 104.3 15.3 86 704-794 27-116 (279)
403 2k2q_B Surfactin synthetase th 98.8 6.6E-09 2.2E-13 107.4 10.0 169 710-897 37-237 (242)
404 1p0i_A Cholinesterase; serine 98.8 3.9E-09 1.3E-13 121.8 8.5 128 652-795 93-228 (529)
405 2fj0_A JuvenIle hormone estera 98.8 2E-09 6.9E-14 124.6 5.8 130 652-794 91-233 (551)
406 1gpl_A RP2 lipase; serine este 98.8 3.4E-09 1.2E-13 118.9 7.3 161 670-877 70-236 (432)
407 1ea5_A ACHE, acetylcholinester 98.8 5.1E-09 1.8E-13 120.8 8.3 132 646-795 91-230 (537)
408 2ece_A 462AA long hypothetical 98.7 2.9E-06 1E-10 92.7 27.3 254 163-474 106-399 (462)
409 1llf_A Lipase 3; candida cylin 98.7 1.5E-08 5E-13 116.8 8.9 130 652-793 98-243 (534)
410 2ece_A 462AA long hypothetical 98.7 2.5E-05 8.7E-10 85.3 33.5 119 335-475 141-272 (462)
411 1mda_H Methylamine dehydrogena 98.7 6.2E-07 2.1E-11 97.7 20.8 251 220-569 47-354 (368)
412 2ovr_B FBW7, F-BOX/WD repeat p 98.7 8.2E-06 2.8E-10 92.5 30.9 268 195-622 124-395 (445)
413 1thg_A Lipase; hydrolase(carbo 98.7 1.7E-08 5.9E-13 116.4 8.4 130 652-793 106-251 (544)
414 1npe_A Nidogen, entactin; glyc 98.7 1.7E-06 5.9E-11 90.6 23.0 190 200-491 1-199 (267)
415 2bce_A Cholesterol esterase; h 98.7 1.5E-08 5E-13 117.4 7.4 140 645-793 76-222 (579)
416 1dx4_A ACHE, acetylcholinester 98.7 4.1E-08 1.4E-12 114.4 10.8 115 668-794 139-267 (585)
417 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 2.5E-06 8.6E-11 91.5 23.9 240 163-490 46-299 (314)
418 1npe_A Nidogen, entactin; glyc 98.7 4.4E-06 1.5E-10 87.4 25.1 224 314-622 10-242 (267)
419 2w18_A PALB2, fancn, partner a 98.7 7.5E-07 2.6E-11 94.4 18.9 123 110-261 113-244 (356)
420 2hfk_A Pikromycin, type I poly 98.6 7.3E-08 2.5E-12 104.1 10.9 174 710-898 115-312 (319)
421 3dsm_A Uncharacterized protein 98.6 2.9E-06 1E-10 91.9 23.2 192 199-491 52-254 (328)
422 2oit_A Nucleoporin 214KDA; NH2 98.6 2E-06 6.8E-11 97.1 22.1 151 189-416 93-258 (434)
423 1p22_A F-BOX/WD-repeat protein 98.6 3.9E-06 1.3E-10 94.9 24.2 212 195-528 138-353 (435)
424 3hrp_A Uncharacterized protein 98.6 1E-05 3.5E-10 90.3 26.9 222 164-487 153-407 (409)
425 3bix_A Neuroligin-1, neuroligi 98.6 4.6E-08 1.6E-12 113.6 7.8 128 652-793 112-248 (574)
426 2cb9_A Fengycin synthetase; th 98.5 5.3E-07 1.8E-11 93.1 13.6 164 710-898 46-226 (244)
427 2oit_A Nucleoporin 214KDA; NH2 98.5 4.4E-06 1.5E-10 94.2 22.3 105 332-477 150-262 (434)
428 3dsm_A Uncharacterized protein 98.5 4.5E-06 1.5E-10 90.4 21.5 231 164-490 65-302 (328)
429 2w18_A PALB2, fancn, partner a 98.5 5.4E-06 1.9E-10 87.8 21.0 158 332-528 179-345 (356)
430 3tej_A Enterobactin synthase c 98.5 3E-07 1E-11 99.7 11.6 170 710-894 125-327 (329)
431 1rwi_B Serine/threonine-protei 98.5 1.8E-05 6.1E-10 82.7 25.0 193 190-490 68-264 (270)
432 3n2z_B Lysosomal Pro-X carboxy 98.5 4.8E-07 1.6E-11 100.7 13.1 87 706-795 62-162 (446)
433 1ys1_X Lipase; CIS peptide Leu 98.5 5.4E-07 1.8E-11 96.5 13.0 106 670-794 8-114 (320)
434 1jmk_C SRFTE, surfactin synthe 98.5 1.6E-07 5.6E-12 95.9 8.6 183 670-895 17-227 (230)
435 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 1.3E-05 4.6E-10 85.7 23.4 246 190-528 19-286 (314)
436 1mda_H Methylamine dehydrogena 98.5 2.1E-06 7.2E-11 93.5 16.9 282 164-491 47-347 (368)
437 3hrp_A Uncharacterized protein 98.5 3.4E-05 1.2E-09 86.0 27.2 200 190-491 132-355 (409)
438 3v65_B Low-density lipoprotein 98.5 4.1E-05 1.4E-09 84.6 27.5 187 314-569 96-285 (386)
439 1rwi_B Serine/threonine-protei 98.5 2E-05 6.9E-10 82.2 23.6 195 190-491 25-223 (270)
440 3fvz_A Peptidyl-glycine alpha- 98.5 8.7E-06 3E-10 88.1 21.4 121 334-490 198-322 (329)
441 3icv_A Lipase B, CALB; circula 98.5 9.4E-07 3.2E-11 92.9 12.7 82 704-795 86-170 (316)
442 3v65_B Low-density lipoprotein 98.5 2.8E-05 9.5E-10 86.0 25.4 180 218-491 95-278 (386)
443 1bu8_A Protein (pancreatic lip 98.4 3.9E-07 1.3E-11 102.4 10.1 108 670-793 70-180 (452)
444 3fvz_A Peptidyl-glycine alpha- 98.4 3.5E-05 1.2E-09 83.3 25.0 235 314-617 69-321 (329)
445 1q7f_A NHL, brain tumor CG1071 98.4 4.4E-05 1.5E-09 80.5 25.1 193 190-486 78-278 (286)
446 1ijq_A LDL receptor, low-densi 98.4 0.00011 3.9E-09 78.7 28.2 187 314-569 10-203 (316)
447 1w52_X Pancreatic lipase relat 98.4 5.5E-07 1.9E-11 101.2 10.1 108 670-793 70-180 (452)
448 1fwx_A Nitrous oxide reductase 98.4 3.2E-05 1.1E-09 87.6 23.9 211 190-490 86-308 (595)
449 3v64_C Agrin; beta propeller, 98.4 5.8E-05 2E-09 82.2 25.5 180 218-491 52-235 (349)
450 3v64_C Agrin; beta propeller, 98.4 0.00011 3.7E-09 80.0 27.5 187 314-569 53-242 (349)
451 1ijq_A LDL receptor, low-densi 98.4 7.7E-05 2.6E-09 80.0 25.7 180 218-491 9-196 (316)
452 1q7f_A NHL, brain tumor CG1071 98.4 5E-05 1.7E-09 80.0 23.9 201 190-490 31-238 (286)
453 1ex9_A Lactonizing lipase; alp 98.4 1.9E-06 6.5E-11 91.0 12.3 103 670-794 7-109 (285)
454 3p5b_L Low density lipoprotein 98.3 0.00011 3.9E-09 81.5 26.6 180 218-491 91-278 (400)
455 1fwx_A Nitrous oxide reductase 98.3 2.3E-05 7.9E-10 88.8 20.8 262 164-474 113-406 (595)
456 3p5b_L Low density lipoprotein 98.3 0.00015 5.3E-09 80.3 27.3 225 313-620 91-322 (400)
457 3sov_A LRP-6, low-density lipo 98.3 0.00011 3.8E-09 78.6 24.4 224 313-621 12-241 (318)
458 1hpl_A Lipase; hydrolase(carbo 98.3 1.9E-06 6.5E-11 96.2 10.3 108 670-793 69-179 (449)
459 2x5x_A PHB depolymerase PHAZ7; 98.3 2E-06 7E-11 92.3 10.1 88 703-795 72-166 (342)
460 2zyr_A Lipase, putative; fatty 98.2 1.8E-06 6.1E-11 95.8 8.3 167 670-897 22-230 (484)
461 1rp1_A Pancreatic lipase relat 98.2 3.3E-06 1.1E-10 94.3 9.8 107 670-793 70-179 (450)
462 3s94_A LRP-6, low-density lipo 98.2 0.002 6.8E-08 75.5 33.9 208 332-624 349-557 (619)
463 3sov_A LRP-6, low-density lipo 98.2 0.00018 6.1E-09 77.0 22.7 137 314-491 57-198 (318)
464 1n7d_A LDL receptor, low-densi 98.2 2.7E-05 9.3E-10 93.0 17.7 180 218-491 385-572 (699)
465 2z2n_A Virginiamycin B lyase; 98.2 0.00066 2.2E-08 71.6 26.8 192 190-489 58-254 (299)
466 1n7d_A LDL receptor, low-densi 98.1 4.6E-05 1.6E-09 91.0 19.2 226 314-622 386-618 (699)
467 3no2_A Uncharacterized protein 98.1 0.00059 2E-08 71.4 25.4 182 215-491 11-196 (276)
468 3m0c_C LDL receptor, low-densi 98.1 0.00032 1.1E-08 84.2 26.2 180 218-491 403-590 (791)
469 2z2n_A Virginiamycin B lyase; 98.1 0.0015 5.2E-08 68.7 29.1 191 190-488 16-211 (299)
470 3m0c_C LDL receptor, low-densi 98.1 0.00065 2.2E-08 81.6 28.3 188 314-570 404-598 (791)
471 2dst_A Hypothetical protein TT 98.1 1.1E-05 3.7E-10 74.0 9.9 64 710-782 40-103 (131)
472 3no2_A Uncharacterized protein 98.1 0.00045 1.5E-08 72.3 23.4 80 163-261 15-94 (276)
473 3s94_A LRP-6, low-density lipo 98.1 0.013 4.4E-07 68.6 37.6 123 459-625 352-474 (619)
474 2p4o_A Hypothetical protein; p 98.0 0.00084 2.9E-08 71.5 24.2 242 180-528 23-276 (306)
475 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0013 4.6E-08 77.1 27.6 189 201-491 7-198 (628)
476 2iwa_A Glutamine cyclotransfer 98.0 0.00052 1.8E-08 70.4 20.3 199 191-490 23-237 (266)
477 2qe8_A Uncharacterized protein 98.0 0.0014 4.8E-08 71.0 24.9 143 315-488 43-224 (343)
478 2iwa_A Glutamine cyclotransfer 98.0 0.0005 1.7E-08 70.6 19.8 181 313-562 43-238 (266)
479 2qc5_A Streptogramin B lactona 97.9 0.0035 1.2E-07 65.8 27.6 193 190-490 63-260 (300)
480 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0039 1.3E-07 73.2 28.9 222 313-621 14-240 (628)
481 2qe8_A Uncharacterized protein 97.9 0.0019 6.5E-08 69.9 24.7 153 313-490 92-278 (343)
482 3qqz_A Putative uncharacterize 97.9 0.0016 5.4E-08 66.4 21.7 211 180-490 20-253 (255)
483 3tjm_A Fatty acid synthase; th 97.9 1.7E-05 6E-10 83.6 7.4 69 713-793 49-123 (283)
484 2qc5_A Streptogramin B lactona 97.8 0.014 4.9E-07 61.1 29.5 193 190-490 21-218 (300)
485 3tc9_A Hypothetical hydrolase; 97.8 0.0031 1E-07 70.5 24.5 136 164-375 160-301 (430)
486 2p4o_A Hypothetical protein; p 97.8 0.0011 3.8E-08 70.5 20.1 93 340-475 175-277 (306)
487 2fp8_A Strictosidine synthase; 97.8 0.006 2.1E-07 65.2 26.1 144 316-490 103-269 (322)
488 2fp8_A Strictosidine synthase; 97.7 0.0026 9E-08 68.1 21.3 76 313-415 164-244 (322)
489 3tc9_A Hypothetical hydrolase; 97.7 0.0083 2.8E-07 67.0 25.8 158 190-440 138-299 (430)
490 2hih_A Lipase 46 kDa form; A1 97.5 0.00027 9.3E-09 78.0 10.4 37 759-795 151-213 (431)
491 2dsn_A Thermostable lipase; T1 97.5 0.00057 2E-08 74.3 12.2 38 758-795 103-165 (387)
492 3qqz_A Putative uncharacterize 97.5 0.043 1.5E-06 55.7 25.3 115 332-487 27-150 (255)
493 3nol_A Glutamine cyclotransfer 97.4 0.015 5.3E-07 58.7 20.3 167 312-528 63-243 (262)
494 3a9g_A Putative uncharacterize 97.1 0.12 4.2E-06 55.7 26.2 153 314-488 49-229 (354)
495 1whs_A Serine carboxypeptidase 97.1 0.0088 3E-07 60.3 15.2 151 640-795 22-187 (255)
496 3nol_A Glutamine cyclotransfer 97.1 0.019 6.5E-07 58.1 17.4 194 192-488 46-254 (262)
497 2ism_A Putative oxidoreductase 97.1 0.029 9.8E-07 60.7 20.1 249 108-486 30-351 (352)
498 1xip_A Nucleoporin NUP159; bet 97.0 0.019 6.4E-07 62.5 18.0 85 312-417 144-232 (388)
499 3kya_A Putative phosphatase; s 97.0 0.033 1.1E-06 62.3 20.4 164 191-440 141-339 (496)
500 1kb0_A Quinohemoprotein alcoho 97.0 0.58 2E-05 55.3 32.2 26 199-233 127-152 (677)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=1.3e-55 Score=540.59 Aligned_cols=629 Identities=14% Similarity=0.090 Sum_probs=441.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeee-ccCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEI-QGFPDG 188 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~l-t~~~~~ 188 (958)
....++|||||++|+.. . ++|++|++.+ +..+.+ ++....
T Consensus 18 ~~~~~~w~~dg~~~~~~-~----------------------------------~~i~~~~~~~----~~~~~~~~~~~~~ 58 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-E----------------------------------NNILVFNAEY----GNSSVFLENSTFD 58 (740)
T ss_dssp CCCCEEECSSSEEEEEE-T----------------------------------TEEEEEETTT----CCEEEEECTTTTT
T ss_pred cccccEECCCCcEEEEc-C----------------------------------CcEEEEECCC----CceEEEEechhhh
Confidence 46689999999877764 3 3799999865 444444 322111
Q ss_pred C-cc--cceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCC
Q 002164 189 A-KL--NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (958)
Q Consensus 189 ~-~~--~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (958)
. .+ ..++|||||++|+|..........+...++|++|+++|+.++|+..+.. +..++|||||+.|+|+
T Consensus 59 ~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~-----~~~~~~SPdG~~la~~---- 129 (740)
T 4a5s_A 59 EFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNN-----TQWVTWSPVGHKLAYV---- 129 (740)
T ss_dssp TCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTT-----EEEEEECSSTTCEEEE----
T ss_pred hhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCc-----ceeeEECCCCCEEEEE----
Confidence 1 22 2389999999999987533222234457899999999999988765543 6689999999999998
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCCcc---c-------
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAV---Y------- 334 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~~~---~------- 334 (958)
...+||++++ +|+.++|+..+. +
T Consensus 130 ----------------------------------------------~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 130 ----------------------------------------------WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDW 163 (740)
T ss_dssp ----------------------------------------------ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCH
T ss_pred ----------------------------------------------ECCeEEEEECCCCceEEEcCCCCccceecCcccc
Confidence 2346999999 888888875411 1
Q ss_pred ----------cccccCCCCcEEEEEeecCCcccc--c-------------------cCCC--CCceeEEEeccC---c--
Q 002164 335 ----------TSLDPSPDEKYILISSIHRPYSFI--V-------------------PCGR--FPRQVGVWTTDG---I-- 376 (958)
Q Consensus 335 ----------~~~~~SpDGk~l~~~~~~~~~~~~--~-------------------~~~~--~~~~i~l~d~~~---~-- 376 (958)
..+.|||||++|+|.+.+...... . +.+. ...+|++||+++ +
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 247899999999999755331100 0 0011 112688999988 6
Q ss_pred -eEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC-------c
Q 002164 377 -FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-------P 448 (958)
Q Consensus 377 -~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-------~ 448 (958)
..+.+..... ..+....+..++|||||+.++++.+.. .....|+++++ ++++ .
T Consensus 244 ~~~~~l~~~~~-------~~~~~~~~~~~~wspdg~~~~~~~~r~---------~~~~~i~~~d~---~tg~~~~~~~~~ 304 (740)
T 4a5s_A 244 ATSIQITAPAS-------MLIGDHYLCDVTWATQERISLQWLRRI---------QNYSVMDICDY---DESSGRWNCLVA 304 (740)
T ss_dssp CCEEEECCCHH-------HHTSCEEEEEEEEEETTEEEEEEEESS---------TTEEEEEEEEE---ETTTTEEEECGG
T ss_pred ceEEEecCCcc-------CCCCCeEEEEEEEeCCCeEEEEEeCCC---------CCEEEEEEEEC---CCCccccceeEE
Confidence 4555542100 000112346789999999777764432 22346899996 4544 3
Q ss_pred eEE-Ee-ecccc-----CceeeecCCceEE-EEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccC
Q 002164 449 EIL-HK-LDLRY-----GGISWCDDSLALV-YESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTST 520 (958)
Q Consensus 449 ~~l-~~-~~~~~-----~~~~~spDg~~l~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd 520 (958)
+++ .. ....+ ..+.|||||+.|+ +.++.++ ..+||+++++++ ..+.++...... . ..+++|
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G-~~~l~~~~~~~~--~~~~lT~g~~~v-~-------~~~~~d 373 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG-YRHICYFQIDKK--DCTFITKGTWEV-I-------GIEALT 373 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS-CEEEEEEETTCS--SCEESCCSSSCE-E-------EEEEEC
T ss_pred EEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC-ceEEEEEECCCC--ceEecccCCEEE-E-------EEEEEe
Confidence 334 22 22222 3799999999998 6655554 488999999884 556666543322 1 113467
Q ss_pred CceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceE-EEecCC-cccccceeEeecCCCccccccccCCEE
Q 002164 521 GTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE-RIWESD-KEKYYETTVALMSDQTEGDLYLNQLKI 598 (958)
Q Consensus 521 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~-~l~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l 598 (958)
|+.|+|..... .. .....+||.+++++++.+ +|+... .. . .....++||+||+.+
T Consensus 374 ~~~i~f~~~~~------------~~--~~~~~~ly~v~~~g~~~~~~lt~~~~~~----~-----~~~~~~~~S~dg~~~ 430 (740)
T 4a5s_A 374 SDYLYYISNEY------------KG--MPGGRNLYKIQLIDYTKVTCLSCELNPE----R-----CQYYSVSFSKEAKYY 430 (740)
T ss_dssp SSEEEEEESCG------------GG--CTTCBEEEEEETTEEEEEEESSTTTSTT----T-----BCBEEEEECTTSSEE
T ss_pred CCEEEEEEecC------------CC--CCceeEEEEEECCCCCcceeeccccCCC----C-----CceEEEEECCCCCEE
Confidence 88999887320 00 112458999999887665 565321 00 0 011236899999999
Q ss_pred EEEEecCCCCceEEEEECCCCCeeEeecCCCCC----CCCCCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEE
Q 002164 599 LTSKESKTENTQYYIQSWPDKKSCQITDFPHPY----PQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLF 674 (958)
Q Consensus 599 ~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~~----~~~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv 674 (958)
++.++++. |+.+++++..+++..++...+..+ ........+.+++ ..||..+++++++|+++++.+ ++|+||
T Consensus 431 ~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~--~~P~vv 506 (740)
T 4a5s_A 431 QLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFDKSK--KYPLLL 506 (740)
T ss_dssp EEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCCTTS--CEEEEE
T ss_pred EEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCCCCC--CccEEE
Confidence 99999887 788999998888776766554322 2333345677777 679999999999999886544 599999
Q ss_pred EECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-HCCcEEEEcCCCCCCCCCCcccc---hhhHHHHHHHHHHHHHHH
Q 002164 675 WSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEV 750 (958)
Q Consensus 675 ~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~vl~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~l 750 (958)
++||++..... ...| ...+...++ ++||+|+++++++..++|..+.. ..+....++|+.+++++|
T Consensus 507 ~~HGg~~~~~~--------~~~~---~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l 575 (740)
T 4a5s_A 507 DVYAGPCSQKA--------DTVF---RLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQF 575 (740)
T ss_dssp ECCCCTTCCCC--------CCCC---CCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHH
T ss_pred EECCCCccccc--------cccc---CcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHH
Confidence 99998643210 0111 112344566 49999999888766555544321 233446789999999999
Q ss_pred HHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccc-cc--hhhhcHHHHHhcCcccccC
Q 002164 751 VRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-DR--TLWEATSTYVEMSPFMSAN 827 (958)
Q Consensus 751 ~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~sp~~~~~ 827 (958)
.+++.+|++||+|+||||||++|+.++.++|++|+++|+.+|+.++......+... .+ ..+.+++.|...+|+..+.
T Consensus 576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 655 (740)
T 4a5s_A 576 SKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAE 655 (740)
T ss_dssp HTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHHHHCCSSTTTTHHHHHHSCSGGGGG
T ss_pred HhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhHHHHHHcCCCCccccHHHHHhCCHHHHHh
Confidence 99898999999999999999999999999999999999999998754322111100 11 1256677888999999999
Q ss_pred CCCC-CEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhccCC
Q 002164 828 KLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 828 ~~~~-P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
++++ |+||+||++|.+|| +.++.+++++|+..++++++++||+++|.+...+...++++.+.+||.++|....
T Consensus 656 ~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 729 (740)
T 4a5s_A 656 NFKQVEYLLIHGTADDNVH--FQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLPA 729 (740)
T ss_dssp GGGGSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred cCCCCcEEEEEcCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcCCCC
Confidence 9987 99999999999999 9999999999999999999999999999997677788899999999999997543
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=3.6e-54 Score=530.01 Aligned_cols=629 Identities=17% Similarity=0.220 Sum_probs=443.6
Q ss_pred ChhHHHhhc-----CCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCC
Q 002164 99 PPEIREIVD-----APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPD 173 (958)
Q Consensus 99 ~~~~~~~~~-----~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~d 173 (958)
+..+.+++. ...+..++|||||++|+|.+.. ++.... ..|++|++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~----------------------d~~~~~-----~~i~~~d~~~- 73 (741)
T 2ecf_A 22 KLTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGK----------------------DSDRNQ-----LDLWSYDIGS- 73 (741)
T ss_dssp CCCHHHHTSSSCTTCCCCEEEEECTTSSEEEEEECC----------------------SSCTTE-----EEEEEEETTT-
T ss_pred cccHHHHhccCCcCCCCCCCceEecCCCEEEEEecc----------------------CCCCcc-----cEEEEEECCC-
Confidence 345666664 4457789999999999999862 110001 3799999855
Q ss_pred CCCCceeeeccCCCC-----------------------CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCC-
Q 002164 174 GKLGQEIEIQGFPDG-----------------------AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG- 229 (958)
Q Consensus 174 g~~~~~~~lt~~~~~-----------------------~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g- 229 (958)
+..+++...... ..+..++|||||++|+|.. ...||+++++++
T Consensus 74 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~----------~~~i~~~d~~~~~ 140 (741)
T 2ecf_A 74 ---GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPL----------GGELYLYDLKQEG 140 (741)
T ss_dssp ---CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEE----------TTEEEEEESSSCS
T ss_pred ---CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEe----------CCcEEEEECCCCC
Confidence 444444322111 1268899999999999976 279999999999
Q ss_pred --ceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhH
Q 002164 230 --KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDL 307 (958)
Q Consensus 230 --~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~ 307 (958)
+.++++..... +..++|||||++|++.
T Consensus 141 ~~~~~~l~~~~~~-----~~~~~~SPDG~~la~~---------------------------------------------- 169 (741)
T 2ecf_A 141 KAAVRQLTHGEGF-----ATDAKLSPKGGFVSFI---------------------------------------------- 169 (741)
T ss_dssp TTSCCBCCCSSSC-----EEEEEECTTSSEEEEE----------------------------------------------
T ss_pred cceEEEcccCCcc-----cccccCCCCCCEEEEE----------------------------------------------
Confidence 78888765443 6789999999999988
Q ss_pred HHHhhcceEEEEEc-CCeeeecCCC-cc-----------------ccccccCCCCcEEEEEeecCCcccc----------
Q 002164 308 FDYYATTQLVLVSL-DGTVKEIGPP-AV-----------------YTSLDPSPDEKYILISSIHRPYSFI---------- 358 (958)
Q Consensus 308 ~~~~~~~~l~~~~~-~g~~~~l~~~-~~-----------------~~~~~~SpDGk~l~~~~~~~~~~~~---------- 358 (958)
...+||++++ +|+.++++.. .. +..+.|||||++|++.+.+......
T Consensus 170 ----~~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~ 245 (741)
T 2ecf_A 170 ----RGRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADR 245 (741)
T ss_dssp ----ETTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSC
T ss_pred ----eCCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCc
Confidence 1236999999 8888877754 21 3678999999999999765321000
Q ss_pred -------cc-CCC--CCceeEEEeccC-ceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc
Q 002164 359 -------VP-CGR--FPRQVGVWTTDG-IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (958)
Q Consensus 359 -------~~-~~~--~~~~i~l~d~~~-~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~ 427 (958)
.+ .+. ....|++||+++ ++.+.+..... ....+..+.| |||+.|++......
T Consensus 246 ~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~----------~~~~~~~~~~-pDg~~l~~~~~~~~------ 308 (741)
T 2ecf_A 246 TDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKE----------QDIYLARVNW-RDPQHLSFQRQSRD------ 308 (741)
T ss_dssp EEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSC----------SSEEEEEEEE-EETTEEEEEEEETT------
T ss_pred ccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCC----------cceEEEEEEe-CCCCEEEEEEeccc------
Confidence 00 000 112788899988 77666543210 1134467899 99999998643211
Q ss_pred ccccCCeEEEEeCCCCCCCCceEEEeecc-----ccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccC
Q 002164 428 EVTPRDIIYTQQAEPVQGEGPEILHKLDL-----RYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (958)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~~~l~~~~~-----~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 502 (958)
.....|+++++ ++++.+.+..... .+..+.|||||+ +++.+..++ ..+||.++++++ ...++...
T Consensus 309 --~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g-~~~l~~~~~~~~---~~~l~~~~ 378 (741)
T 2ecf_A 309 --QKKLDLVEVTL---ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG-FQHLYRIDSKGK---AAALTHGN 378 (741)
T ss_dssp --SSEEEEEEEET---TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS-SCEEEEECSSSC---EEESCCSS
T ss_pred --CCeEEEEEEEC---CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC-ccEEEEEcCCCC---eeeeeecc
Confidence 23457999996 5666666643322 345799999999 666655544 378999997762 33333322
Q ss_pred CccccCCCCCCce-EeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEe
Q 002164 503 SEDVYSDPGSPMM-RRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVA 581 (958)
Q Consensus 503 ~~~~~~~~~~~~~-~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~ 581 (958)
. .+.. + .|||||++|++..... + ....+||.++++++..++|+...+ +.
T Consensus 379 ~-~v~~------~~~~s~dg~~l~~~~~~~------------~----~~~~~l~~~~~~g~~~~~l~~~~~------~~- 428 (741)
T 2ecf_A 379 W-SVDE------LLAVDEKAGLAYFRAGIE------------S----ARESQIYAVPLQGGQPQRLSKAPG------MH- 428 (741)
T ss_dssp S-CEEE------EEEEETTTTEEEEEECSS------------C----TTCBEEEEEETTCCCCEECCCSCS------EE-
T ss_pred e-EEEe------EeEEeCCCCEEEEEEeCC------------C----CceEEEEEEEcCCCCeeecccCCC------ce-
Confidence 1 1111 3 5999999998876321 0 013368888877666777765222 11
Q ss_pred ecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCC-----CCCCC--CCCcEEEEEEEeCCC-eEEE
Q 002164 582 LMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPH-----PYPQL--ASLQKELIKYQRKDG-VQLS 653 (958)
Q Consensus 582 ~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~-----~~~~~--~~~~~~~~~~~~~dg-~~l~ 653 (958)
.++|||||+.+++..++...|+++|+++..++..+.|+..+. .+... .....+.+++++.+| ..++
T Consensus 429 ------~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 502 (741)
T 2ecf_A 429 ------SASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLN 502 (741)
T ss_dssp ------EEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEE
T ss_pred ------EEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEEEEEcCCCCEEEE
Confidence 257999999999999999999999999987766666664332 22223 444688999999999 9999
Q ss_pred EEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCc-HHHHHHHHCCcEEEEcCCCCCCCCCCccc-
Q 002164 654 ATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGS-TSVLLWLARGFAILGGPTTPIIGEGDEEA- 731 (958)
Q Consensus 654 ~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~la~~G~~vl~~~~~~~~G~G~~~~- 731 (958)
++++.|+++++.+ ++|+||++||++..... ...|..... ..+..|+++||+|+++++++..+.|..+.
T Consensus 503 ~~~~~P~~~~~~~--~~p~vv~~hG~~~~~~~--------~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~ 572 (741)
T 2ecf_A 503 YSVIKPAGFDPAK--RYPVAVYVYGGPASQTV--------TDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGG 572 (741)
T ss_dssp EEEECCSSCCTTS--CEEEEEECCCSTTCCSC--------SSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHH
T ss_pred EEEEeCCCCCCCC--CcCEEEEEcCCCCcccc--------cccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhH
Confidence 9999998765433 48999999998643210 011211100 35678899999999966654433332211
Q ss_pred --chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCccc-ccc
Q 002164 732 --NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN-EDR 808 (958)
Q Consensus 732 --~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-~~~ 808 (958)
...+....+.|+.+++++|.+++.+|+++|+|+||||||++++.++.++|++|+++|+.+|+.++......+.. ...
T Consensus 573 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 652 (741)
T 2ecf_A 573 ALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTERYMD 652 (741)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBHHHHHHHHC
T ss_pred HHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhccccchhhcC
Confidence 11222456899999999999998889999999999999999999999999999999999998774322111100 012
Q ss_pred hhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHH
Q 002164 809 TLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLW 888 (958)
Q Consensus 809 ~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~ 888 (958)
.++...+.|...+|+..+.++++|+|++||++|.++| +.++.+++++|+..+++++++++|+++|.+..... .++.+
T Consensus 653 ~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~ 729 (741)
T 2ecf_A 653 LPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVL--FTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADA-LHRYR 729 (741)
T ss_dssp CTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHH-HHHHH
T ss_pred CcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCC--HHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCch-hHHHH
Confidence 3455667788889999999999999999999999999 99999999999999999999999999999864333 77889
Q ss_pred HHHHHHHHhhc
Q 002164 889 ETDRWLQKYCV 899 (958)
Q Consensus 889 ~i~~fl~~~l~ 899 (958)
.+.+||+++|+
T Consensus 730 ~i~~fl~~~l~ 740 (741)
T 2ecf_A 730 VAEAFLGRCLK 740 (741)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999999985
No 3
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=4.2e-53 Score=519.12 Aligned_cols=632 Identities=12% Similarity=0.059 Sum_probs=422.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCC-
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG- 188 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~- 188 (958)
....++|||||++++ ...+ +.|++|++.+ ++.+.+......
T Consensus 18 ~~~~~~~spdg~~~~-~~~d---------------------------------g~i~~~d~~~----g~~~~~~~~~~~~ 59 (723)
T 1xfd_A 18 HDPEAKWISDTEFIY-REQK---------------------------------GTVRLWNVET----NTSTVLIEGKKIE 59 (723)
T ss_dssp CCCCCCBSSSSCBCC-CCSS---------------------------------SCEEEBCGGG----CCCEEEECTTTTT
T ss_pred cccccEEcCCCcEEE-EeCC---------------------------------CCEEEEECCC----CcEEEEecccccc
Confidence 366899999999554 3322 3789999865 444444321111
Q ss_pred -CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCC
Q 002164 189 -AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (958)
Q Consensus 189 -~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (958)
..+..++|||||++|+|...............||++++++|+.++++..... ...+..++|||||+.|+|.
T Consensus 60 ~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~~~~SPdG~~la~~------ 131 (723)
T 1xfd_A 60 SLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS--NAKLQYAGWGPKGQQLIFI------ 131 (723)
T ss_dssp TTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC--SCCCSBCCBCSSTTCEEEE------
T ss_pred ccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccc--cccccccEECCCCCEEEEE------
Confidence 1378899999999999986422111122347899999999988777654331 1114579999999999988
Q ss_pred CCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC--ccc----------
Q 002164 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVY---------- 334 (958)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~--~~~---------- 334 (958)
...+||++++ +|+.++++.. ..+
T Consensus 132 --------------------------------------------~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~ 167 (723)
T 1xfd_A 132 --------------------------------------------FENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLY 167 (723)
T ss_dssp --------------------------------------------ETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHH
T ss_pred --------------------------------------------ECCeEEEEECCCCceEEEecCCCCCceECcccceeE
Confidence 1236999999 7877777654 222
Q ss_pred --------cccccCCCCcEEEEEeecCCccccc-------------------cCC--CCCceeEEEeccCceE-EEeccC
Q 002164 335 --------TSLDPSPDEKYILISSIHRPYSFIV-------------------PCG--RFPRQVGVWTTDGIFV-RELCDL 384 (958)
Q Consensus 335 --------~~~~~SpDGk~l~~~~~~~~~~~~~-------------------~~~--~~~~~i~l~d~~~~~~-~~l~~~ 384 (958)
..++|||||++|+|.+.+....... +.+ .....+++||+++++. +.+...
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 5789999999999998653210000 000 1123799999987763 555432
Q ss_pred CccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee--cccc----
Q 002164 385 PLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRY---- 458 (958)
Q Consensus 385 ~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~~---- 458 (958)
... ......+..+.|||||+.|++..... .....|+++++ ++++...+... ...+
T Consensus 248 ~~~-------~~~~~~~~~~~~SpDg~~l~~~~~~~---------~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~ 308 (723)
T 1xfd_A 248 DDP-------RMREYYITMVKWATSTKVAVTWLNRA---------QNVSILTLCDA---TTGVCTKKHEDESEAWLHRQN 308 (723)
T ss_dssp CCG-------GGSSEEEEEEEESSSSEEEEEEEETT---------SCEEEEEEEET---TTCCEEEEEEEECSSCCCCCC
T ss_pred ccC-------CCccceeEEEEEeCCCeEEEEEEcCC---------CCeEEEEEEeC---CCCcceEEEEeccCCEEeccC
Confidence 100 00012346799999999776653321 22356899996 56665555322 2222
Q ss_pred CceeeecCCceEEEE-Eeccc---cceEEEEEc-CCCCCC-CcEEEeccCCccccCCCCCCceEeccCCceEEEEeeecc
Q 002164 459 GGISWCDDSLALVYE-SWYKT---RRTRTWVIS-PGSKDV-APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKEN 532 (958)
Q Consensus 459 ~~~~~spDg~~l~~~-~~~~~---~~~~l~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~ 532 (958)
..+.|||||+.|++. ...++ ...+||+++ ..++.. ....++...... .. .++|||||++|+|.....
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~-~~-----~~~~spdg~~l~~~~~~~- 381 (723)
T 1xfd_A 309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV-TK-----ILAYDEKGNKIYFLSTED- 381 (723)
T ss_dssp CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE-EE-----EEEEETTTTEEEEEESSS-
T ss_pred CCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEE-Ee-----eeEEcCCCCEEEEEEcCC-
Confidence 379999999999997 44333 146899999 455310 033333221111 10 157999999999886321
Q ss_pred CCCcEEEEccCCCCCCCCCCeEEEEECCCC-ceEEEecC--CcccccceeEeecCCCccccccccCCEEEEEEecCCCCc
Q 002164 533 DEGTYILLNGNGATPEGNIPFLDLFDINTG-SKERIWES--DKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENT 609 (958)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g-~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~ 609 (958)
.....+||.++++++ +.++|+.. ... ....++|||||+.+++..+++..|.
T Consensus 382 ---------------~~~~~~l~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~spdg~~l~~~~~~~~~p~ 435 (723)
T 1xfd_A 382 ---------------LPRRRQLYSANTVGNFNRQCLSCDLVENC-----------TYFSASFSHSMDFFLLKCEGPGVPM 435 (723)
T ss_dssp ---------------CTTCCEEEEECSSTTCCCBCSSTTSSSSC-----------CCCEEEECTTSSEEEEECCSSSSCC
T ss_pred ---------------CCcceEEEEEeCCCCCCcceecccccCCC-----------CeEEEEECCCCCEEEEEccCCCCCe
Confidence 012346888887664 44555432 110 0123579999999999999999887
Q ss_pred eEEEEECCCCCeeEeecCCC----CCCCCCCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcc
Q 002164 610 QYYIQSWPDKKSCQITDFPH----PYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKD 685 (958)
Q Consensus 610 ~~~~~d~~~g~~~~Lt~~~~----~~~~~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~ 685 (958)
.++. +..+++...+...+. .+........+.+++++.+| ++++++|+|+++++.+ ++|+||++||++.....
T Consensus 436 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~~~~--~~p~vv~~HG~~~~~~~ 511 (723)
T 1xfd_A 436 VTVH-NTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATFTDTT--HYPLLLVVDGTPGSQSV 511 (723)
T ss_dssp EEEE-ETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSCCSSS--CEEEEEECCCCTTCCCC
T ss_pred EEEE-ECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCCCCCC--ccCEEEEEcCCCCcccc
Confidence 6654 655555333322221 11233344567888998898 9999999999875443 59999999998643110
Q ss_pred cCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCccc---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEE
Q 002164 686 AAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---NDRFVEQLVACAEAAVEEVVRRGVAHPSKIA 762 (958)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~---~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~ 762 (958)
...|. .......|+++||+|+++++++..++|..+. ...+....++|+.++++++.+++.+|++||+
T Consensus 512 --------~~~~~--~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~ 581 (723)
T 1xfd_A 512 --------AEKFE--VSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVA 581 (723)
T ss_dssp --------CCCCC--CSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEE
T ss_pred --------Ccccc--ccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEE
Confidence 01111 1123445677999999977765555433221 1223346789999999999998888999999
Q ss_pred EEEeChHHHHHHHHHHhC----CCceeEEEEeccCCCCCCCCCCccc-ccchhhhcHHHHHhcCcccccCCCC-CCEEEE
Q 002164 763 VGGHSYGAFMTANLLAHA----PHLFCCGIARSGAYNRTLTPFGFQN-EDRTLWEATSTYVEMSPFMSANKLK-KPILLV 836 (958)
Q Consensus 763 l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sp~~~~~~~~-~P~Lii 836 (958)
|+||||||++++.++.++ |++|+++|+.+|+.++......+.. ....++...+.+...++...+.+++ +|+||+
T Consensus 582 l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii 661 (723)
T 1xfd_A 582 VFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLII 661 (723)
T ss_dssp EEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEE
T ss_pred EEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhccHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEE
Confidence 999999999999999999 9999999999998875432111100 0011222333455667778888999 799999
Q ss_pred eeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
||++|.+|| +.++.+++++|+..+.+++++++|+++|.+...+....+.+.+.+||.++|+
T Consensus 662 ~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 662 HPTADEKIH--FQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp EETTCSSSC--HHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred EeCCCCCcC--HhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 999999999 9999999999999999999999999999986667778889999999998874
No 4
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=6.2e-51 Score=498.21 Aligned_cols=569 Identities=14% Similarity=0.106 Sum_probs=406.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..++|||| ++|+|+. ...||++++++++.++++..... +..++|||||+.|+++
T Consensus 83 ~v~~~~~spd-~~~~~~~----------~~~i~~~d~~~~~~~~l~~~~~~-----~~~~~~SpdG~~la~~-------- 138 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT----------QGGLVGFDMLARKVTYLFDTNEE-----TASLDFSPVGDRVAYV-------- 138 (706)
T ss_dssp CCEEEEETTT-TEEEEEE----------TTEEEEEETTTTEEEEEECCTTC-----CTTCEECTTSSEEEEE--------
T ss_pred CceeEEECCC-CeEEEEE----------CCEEEEEECCCCceEEccCCccc-----ccCCcCCCCCCEEEEE--------
Confidence 4788999999 8899875 36999999999998888765443 6689999999999987
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C-----CeeeecCCC-cc---------
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-----GTVKEIGPP-AV--------- 333 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~-----g~~~~l~~~-~~--------- 333 (958)
...+||++++ + |+.++++.. ..
T Consensus 139 ------------------------------------------~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 139 ------------------------------------------RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp ------------------------------------------ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred ------------------------------------------ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 2346999999 7 887777655 22
Q ss_pred ------ccccccCCCCcEEEEEeecCCccc-------------------ccc-CCCCCceeEEEeccCceEEEeccCCcc
Q 002164 334 ------YTSLDPSPDEKYILISSIHRPYSF-------------------IVP-CGRFPRQVGVWTTDGIFVRELCDLPLA 387 (958)
Q Consensus 334 ------~~~~~~SpDGk~l~~~~~~~~~~~-------------------~~~-~~~~~~~i~l~d~~~~~~~~l~~~~~~ 387 (958)
+..+.|||||++|++.+.+..... ..+ .......|++||+++++.+.+......
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 378899999999999874321000 000 011235799999998887666532111
Q ss_pred ccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCC-CceEEEee-cc----ccCce
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE-GPEILHKL-DL----RYGGI 461 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~l~~~-~~----~~~~~ 461 (958)
...+..+.|||||+.|++...... .....|+++++ +++ ..+.+... .. .+..+
T Consensus 257 ----------~~~~~~~~~spdg~~l~~~~~~~~--------~~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 257 ----------EKFLTNLSWSPDENILYVAEVNRA--------QNECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp ----------TCEEEEEEECTTSSEEEEEEECTT--------SCEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSCC
T ss_pred ----------ceeEeeEEEECCCCEEEEEEeCCC--------CCeeEEEEEEC---CCCceeeEEEEccCCCeECccCCc
Confidence 123467999999999988532110 12347899996 555 45555322 11 13568
Q ss_pred eeec--CCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEE
Q 002164 462 SWCD--DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYIL 539 (958)
Q Consensus 462 ~~sp--Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~ 539 (958)
.||| ||+.| +.+..++ ..+||.++.+++ ....++..... +.. .+.|||||++|++.....
T Consensus 316 ~~sp~~dg~~l-~~~~~~g-~~~l~~~~~~~~--~~~~l~~~~~~-v~~-----~~~~spdg~~l~~~~~~~-------- 377 (706)
T 2z3z_A 316 TFLPGSNNQFI-WQSRRDG-WNHLYLYDTTGR--LIRQVTKGEWE-VTN-----FAGFDPKGTRLYFESTEA-------- 377 (706)
T ss_dssp EECTTCSSEEE-EEECTTS-SCEEEEEETTSC--EEEECCCSSSC-EEE-----EEEECTTSSEEEEEESSS--------
T ss_pred eeecCCCCEEE-EEEccCC-ccEEEEEECCCC--EEEecCCCCeE-EEe-----eeEEcCCCCEEEEEecCC--------
Confidence 9999 99855 4444443 378999997653 23333322111 110 157999999999887321
Q ss_pred EccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002164 540 LNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (958)
Q Consensus 540 ~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g 619 (958)
. ....+||.+|+++++.++++.... +. .++|||||+.+++...+...|.+++++++.++
T Consensus 378 ------~--~~~~~l~~~d~~~~~~~~l~~~~~------~~-------~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 378 ------S--PLERHFYCIDIKGGKTKDLTPESG------MH-------RTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp ------C--TTCBEEEEEETTCCCCEESCCSSS------EE-------EEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred ------C--CceEEEEEEEcCCCCceeccCCCc------eE-------EEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 0 012479999999988877764332 11 25799999999999999999999999999888
Q ss_pred CeeEeecCCCCCCCCCCCcEEEEEEEeCCC-eEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCC
Q 002164 620 KSCQITDFPHPYPQLASLQKELIKYQRKDG-VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFP 698 (958)
Q Consensus 620 ~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~ 698 (958)
+.+.++..+ .+..+.....+.++++..+| .++++++++|+++++.+ ++|+||++||++..... ...|.
T Consensus 437 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~--~~p~iv~~HGg~~~~~~--------~~~~~ 505 (706)
T 2z3z_A 437 SHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAK--KYPVIVYVYGGPHAQLV--------TKTWR 505 (706)
T ss_dssp EEEEEECC-------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTS--CEEEEEECCCCTTCCCC--------CSCC-
T ss_pred eEeeccccc-hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCC--CccEEEEecCCCCceee--------ccccc
Confidence 755555443 34445555678899999999 89999999999876543 48999999998643210 01121
Q ss_pred CcCcHHHHHHHHCCcEEEEcCCCCCCCCCCccc---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 002164 699 RIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (958)
Q Consensus 699 ~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~---~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 775 (958)
.....+++.|+++||.|+++++++..+.|..+. ...+....++|+.+++++|.+++.+|++|++|+||||||++|+.
T Consensus 506 ~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 585 (706)
T 2z3z_A 506 SSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTN 585 (706)
T ss_dssp ---CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred cCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHH
Confidence 111125678899999999976665544433221 12334567899999999999988889999999999999999999
Q ss_pred HHHhCCCceeEEEEeccCCCCCCCCCCccc-ccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHH
Q 002164 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQN-EDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (958)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (958)
++.++|++|+++|+.+|+.++......+.. ....++..++.|...+|...+.++++|+|++||++|.+|| +.++.++
T Consensus 586 ~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~ 663 (706)
T 2z3z_A 586 LMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVV--WQHSLLF 663 (706)
T ss_dssp HHHHSTTTEEEEEEESCCCCGGGSBHHHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSC--THHHHHH
T ss_pred HHHhCCCcEEEEEEcCCccchHHHHhhhhhhhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCC--HHHHHHH
Confidence 999999999999999998774322111100 0123445667788889999999999999999999999999 9999999
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 855 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
+++|+..+++++++++|+++|.+... ...++.+.+.+||.++|
T Consensus 664 ~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 664 LDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp HHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 99999999999999999999998644 67788999999999875
No 5
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-51 Score=500.45 Aligned_cols=606 Identities=15% Similarity=0.096 Sum_probs=410.2
Q ss_pred eceeEEEccCCCCCCceeeeccCCCC--CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCce---eeccCC
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDG--AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA---RPLFQS 237 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~--~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~---~~lt~~ 237 (958)
++|++|++.+ +..+++...... ..+..++|||||++|+|.......-.......||++++++|+. ++++
T Consensus 36 ~~i~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-- 109 (719)
T 1z68_A 36 NNIVLYNIET----GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-- 109 (719)
T ss_dssp SCEEEEESSS----CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--
T ss_pred CCEEEEEcCC----CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC--
Confidence 4799999865 555555421100 0278899999999999987522000012357899999999988 6553
Q ss_pred CCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEE
Q 002164 238 PDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLV 317 (958)
Q Consensus 238 ~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~ 317 (958)
.. +..++|||||+.|+|+ ...+|+
T Consensus 110 -~~-----~~~~~~SPDG~~la~~--------------------------------------------------~~~~i~ 133 (719)
T 1z68_A 110 -RP-----IQYLCWSPVGSKLAYV--------------------------------------------------YQNNIY 133 (719)
T ss_dssp -SS-----BCCEEECSSTTCEEEE--------------------------------------------------ETTEEE
T ss_pred -cc-----cccceECCCCCEEEEE--------------------------------------------------ECCeEE
Confidence 21 5689999999999988 224689
Q ss_pred EEEc-CCeeeecCCCc--c------------------ccccccCCCCcEEEEEeecCCcccc------------------
Q 002164 318 LVSL-DGTVKEIGPPA--V------------------YTSLDPSPDEKYILISSIHRPYSFI------------------ 358 (958)
Q Consensus 318 ~~~~-~g~~~~l~~~~--~------------------~~~~~~SpDGk~l~~~~~~~~~~~~------------------ 358 (958)
++++ +|+.++++..+ . ...++|||||++|+|.+.+......
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 9998 88777776431 1 1478999999999998865321000
Q ss_pred -ccCC--CCCceeEEEeccCceEE---EeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccC
Q 002164 359 -VPCG--RFPRQVGVWTTDGIFVR---ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPR 432 (958)
Q Consensus 359 -~~~~--~~~~~i~l~d~~~~~~~---~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~ 432 (958)
...+ ....++++||++++... .+... ..+......+..++|||||+.++.+.+.. ...
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~SpD~~~~~~~~~~~---------~~~ 277 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP-------AMIASSDYYFSWLTWVTDERVCLQWLKRV---------QNV 277 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCC-------HHHHTSCEEEEEEEESSSSEEEEEEEESS---------TTE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCC-------ccCCCCcceEEEeEEeCCCeEEEEEeccc---------cCe
Confidence 0000 11237889999876542 22210 00011113346799999976433322211 123
Q ss_pred CeEEEEe----CCCCCCCCceEEE-----eeccccC-----ceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002164 433 DIIYTQQ----AEPVQGEGPEILH-----KLDLRYG-----GISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (958)
Q Consensus 433 ~~l~~~~----~~~~~g~~~~~l~-----~~~~~~~-----~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 498 (958)
..|++++ + ++++.+.+. .....+. .+.|||||+.|++.........+||+++++++ +.+.+
T Consensus 278 ~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~l 352 (719)
T 1z68_A 278 SVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQI 352 (719)
T ss_dssp EEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEEC
T ss_pred EEEEEEcccCCC---CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEec
Confidence 4688998 5 344433333 2233344 78999999999986544444578999999875 34455
Q ss_pred eccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCC--ceEEEecCCccccc
Q 002164 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG--SKERIWESDKEKYY 576 (958)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g--~~~~l~~~~~~~~~ 576 (958)
+..... +.. +.++ ||++|+|..... .......+||.++++++ +.++|+..-..
T Consensus 353 t~~~~~-v~~------~~~~-d~~~i~~~~~~~--------------~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~--- 407 (719)
T 1z68_A 353 TSGKWE-AIN------IFRV-TQDSLFYSSNEF--------------EEYPGRRNIYRISIGSYPPSKKCVTCHLRK--- 407 (719)
T ss_dssp SCSSSC-EEE------EEEE-CSSEEEEEESCG--------------GGCTTCBEEEEEECSSSSCCEEESSTTTTT---
T ss_pred ccCceE-EEE------EEEE-eCCEEEEEEecC--------------CCCCceEEEEEEeCCCCCCCceeccCccCC---
Confidence 432221 111 4456 999999887320 00012346888888666 44566531100
Q ss_pred ceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCCC----CCCCCCCcEEEEEEEeCCCeEE
Q 002164 577 ETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHP----YPQLASLQKELIKYQRKDGVQL 652 (958)
Q Consensus 577 ~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~----~~~~~~~~~~~~~~~~~dg~~l 652 (958)
.. .....++||+||+.+++..+++..| .++++++.+|+..+++..+.. +........+.++++..+ .++
T Consensus 408 ~~-----~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l 480 (719)
T 1z68_A 408 ER-----CQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-ITL 480 (719)
T ss_dssp TT-----BCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EEE
T ss_pred CC-----CceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-eEE
Confidence 00 0001257899999999998888777 688899888887777766542 233444467889999877 999
Q ss_pred EEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-HCCcEEEEcCCCCCCCCCCccc
Q 002164 653 SATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEEA 731 (958)
Q Consensus 653 ~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~vl~~~~~~~~G~G~~~~ 731 (958)
++++++|+++++.+ ++|+||++||++..... ...| ...+...++ ++||+|+.+++++..++|..+.
T Consensus 481 ~~~~~~P~~~~~~~--~~p~vl~~hG~~~~~~~--------~~~~---~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~ 547 (719)
T 1z68_A 481 WYKMILPPQFDRSK--KYPLLIQVYGGPCSQSV--------RSVF---AVNWISYLASKEGMVIALVDGRGTAFQGDKLL 547 (719)
T ss_dssp EEEEEECTTCCSSS--CEEEEEEECCCTTBCCC--------CCCC---CCCHHHHHHHTTCCEEEEEECTTBSSSCHHHH
T ss_pred EEEEEeCCCCCCCC--CccEEEEECCCCCcCcc--------cccc---hhhHHHHHHhcCCeEEEEEcCCCCCCCchhhH
Confidence 99999999875433 58999999998643210 0111 112344454 7999999977765544443221
Q ss_pred ---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCccc-cc
Q 002164 732 ---NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN-ED 807 (958)
Q Consensus 732 ---~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~-~~ 807 (958)
...+....+.|+.+++++|.+++.+|++||+|+||||||++|+.++.++|++|+++|+.+|+.++......+.. ..
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~ 627 (719)
T 1z68_A 548 YAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFM 627 (719)
T ss_dssp GGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHHHHHH
T ss_pred HHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccccchhhc
Confidence 12234567899999999999988899999999999999999999999999999999999998875432111100 00
Q ss_pred chh--hhcHHHHHhcCcccccCCCCC-CEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHH
Q 002164 808 RTL--WEATSTYVEMSPFMSANKLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIM 884 (958)
Q Consensus 808 ~~~--~~~~~~~~~~sp~~~~~~~~~-P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~ 884 (958)
+.+ ++..+.|...+|+..+.++++ |+||+||++|.+|| +.++.+++++|+..+++++++++|+++|.+ ..+...
T Consensus 628 g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~ 704 (719)
T 1z68_A 628 GLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVH--FQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTN 704 (719)
T ss_dssp CCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSC--THHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHH
T ss_pred CCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcC--HHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHH
Confidence 111 345566788889889999998 89999999999999 999999999999999999999999999998 455678
Q ss_pred HHHHHHHHHHHHhhc
Q 002164 885 HVLWETDRWLQKYCV 899 (958)
Q Consensus 885 ~~~~~i~~fl~~~l~ 899 (958)
.+.+.+.+||.++|+
T Consensus 705 ~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 705 HLYTHMTHFLKQCFS 719 (719)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhC
Confidence 889999999999873
No 6
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=1.2e-48 Score=474.18 Aligned_cols=575 Identities=16% Similarity=0.149 Sum_probs=415.1
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcccccccc---------ceEEe--cCCeE
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFD---------NFVWV--NNSTL 257 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~---------~~~ws--pDG~~ 257 (958)
..+..|+||+ ++++|+..+. ..++...||++ ..+|+.++++..+.. +. .+.|+ |||+.
T Consensus 24 ~~~~~~~~s~--~~~~~~~~~~---~~~~~~~l~~~-~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 24 GRPACVGAVG--DEVWWVAPRP---AEAGRATLVRR-RADGAEESALPAPWN-----VRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp SCCEEEEEET--TEEEEEEEET---TTTTEEEEEEE-CTTSCEEESSCTTCC-----BCCCGGGTCCCCEEEECCSSSSC
T ss_pred CccceeEEcC--CeEEEEecCc---ccCCcEEEEEE-CCCCCcceeCCCCcc-----ccccccccCCccceeeeecCCCe
Confidence 4688899995 4788887532 23456788888 567888899876532 22 56687 99999
Q ss_pred -EEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcC----CeeeecCC--
Q 002164 258 -LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLD----GTVKEIGP-- 330 (958)
Q Consensus 258 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~----g~~~~l~~-- 330 (958)
|+|+.. ...+||+++++ |+.++|+.
T Consensus 93 ~la~~~~------------------------------------------------~~~~l~~~~~~~~g~~~~~~l~~~~ 124 (662)
T 3azo_A 93 LLVFTHF------------------------------------------------GDQRLYAFEPDAPGGAVPRPLTPVS 124 (662)
T ss_dssp EEEEEBT------------------------------------------------TTCCEEEECTTSTTCCCCEECSCCC
T ss_pred EEEEEEC------------------------------------------------CCCeEEEEcCCCCCCCCCEeccCCc
Confidence 888711 12469999986 77888876
Q ss_pred ---C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC------ceEEEec-cCCccccCccccccccc
Q 002164 331 ---P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG------IFVRELC-DLPLAEDIPIAFNSVRK 399 (958)
Q Consensus 331 ---~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~------~~~~~l~-~~~~~~~~p~~~~~~~~ 399 (958)
. ..+..++|||||++|++++.+.... . ......+|++|++++ +..+.|+ ... .
T Consensus 125 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~--~-~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~-------------~ 188 (662)
T 3azo_A 125 AVGGGLRWADPVLLPERGEVWCMAEEFTGE--G-PSDVRRFLAAVPLDGSAAADRSAVRELSDDAH-------------R 188 (662)
T ss_dssp CSTTCEEEEEEEEETTTTEEEEEEEEECSS--S-TTCEEEEEEEEETTSTTTTCGGGSEESSCSCS-------------S
T ss_pred cCCCCccccCcEECCCCCEEEEEEecccCC--C-CCCceeEEEEEECCCCccccCCceeEEEecCC-------------C
Confidence 3 4567899999999999998642100 0 001124899999998 7777776 422 2
Q ss_pred CcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCC-CC---CceEEEee-ccccCceeeecCCceEEEEE
Q 002164 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GE---GPEILHKL-DLRYGGISWCDDSLALVYES 474 (958)
Q Consensus 400 ~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~---~~~~l~~~-~~~~~~~~~spDg~~l~~~~ 474 (958)
....+.|||||+.|++.....++.. .....||++++ + ++ +.+.++.. ...+..+.|||||+ |+|.+
T Consensus 189 ~~~~~~~SpDG~~la~~~~~~~~~~-----~~~~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~ 259 (662)
T 3azo_A 189 FVTGPRLSPDGRQAVWLAWDHPRMP-----WEGTELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVAT 259 (662)
T ss_dssp EECCCEECTTSSEEEEEEECTTCCT-----TTCEEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEE
T ss_pred cccCceECCCCCEEEEEECCCCCCC-----CCCcEEEEEEE---CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEE
Confidence 2356889999999998643221100 12347999996 4 34 55666554 46677899999999 88887
Q ss_pred eccccceEEEEEcCCCCCCCcEEEeccCCccccCCC---CCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCC
Q 002164 475 WYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP---GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNI 551 (958)
Q Consensus 475 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (958)
+.++ ..+||+++++++ +.+.++..... ..... +...+.|+|||+.++... . ..
T Consensus 260 ~~~~-~~~l~~~~~~~~--~~~~l~~~~~~-~~~p~w~~~~~~~~~~~~~~~~~~~~-------------------~-~~ 315 (662)
T 3azo_A 260 DRTG-WWNLHRVDPATG--AATQLCRREEE-FAGPLWTPGMRWFAPLANGLIAVVHG-------------------K-GA 315 (662)
T ss_dssp CTTS-SCEEEEECTTTC--CEEESSCCSSB-SSCCCCSTTCCSEEECTTSCEEEEEB-------------------S-SS
T ss_pred CCCC-CeEEEEEECCCC--ceeeccccccc-ccCccccccCceEeEeCCCEEEEEEE-------------------c-Cc
Confidence 6654 368999998764 33444432221 11100 001144556665433322 1 23
Q ss_pred CeEEEEECCCCceEEEecCCcccccceeEeecCCCccccc-cccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCCC
Q 002164 552 PFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDL-YLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHP 630 (958)
Q Consensus 552 ~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~ 630 (958)
.+||++|+++++.++|+..... +. .+ ++|++.+++...+...+..+|++++.+++.++|+..+..
T Consensus 316 ~~l~~~d~~~~~~~~l~~~~~~-----~~---------~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~ 381 (662)
T 3azo_A 316 AVLGILDPESGELVDAAGPWTE-----WA---------ATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTD 381 (662)
T ss_dssp CEEEEEETTTTEEEECCSSCCE-----EE---------EEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCC
T ss_pred cEEEEEECCCCcEEEecCCCCe-----EE---------EEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcc
Confidence 4799999998888877654322 11 23 778899999999999999999999999999999876543
Q ss_pred -CCCCCCCcEEEEEEEeCCCeEEEEEEEecCCCC--CCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHH
Q 002164 631 -YPQLASLQKELIKYQRKDGVQLSATLYLPPGYD--PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLL 707 (958)
Q Consensus 631 -~~~~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~--~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (958)
+........+.++++..+|..+++++++|++++ ....+++|+||++||++..... ..| ...++.
T Consensus 382 ~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~---------~~~----~~~~~~ 448 (662)
T 3azo_A 382 PVDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVP---------AVL----DLDVAY 448 (662)
T ss_dssp SSCGGGSCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCC---------CSC----CHHHHH
T ss_pred cCCccccCcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCc---------ccc----hHHHHH
Confidence 233333457888999889999999999998754 0112358999999998643211 012 245678
Q ss_pred HHHCCcEEEEcCCCCCCCCCCcccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCce
Q 002164 708 WLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (958)
Q Consensus 708 la~~G~~vl~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~ 784 (958)
|+++||+|+.+++++..|+|.++.. ..+....++|+.+++++|++++.+|++||+|+||||||+++++++.+ |++|
T Consensus 449 l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~ 527 (662)
T 3azo_A 449 FTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVY 527 (662)
T ss_dssp HHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCC
T ss_pred HHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCce
Confidence 8999999999998888888887542 23344678999999999999998999999999999999999999887 7999
Q ss_pred eEEEEeccCCCCCCC------CCC--cc-cccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHH
Q 002164 785 CCGIARSGAYNRTLT------PFG--FQ-NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (958)
Q Consensus 785 ~a~v~~~~~~~~~~~------~~~--~~-~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~ 855 (958)
+++|+.+|+.++... .+. +. ...+...+..+.|...+|+.++.++++|+|++||++|.+|| +.++++++
T Consensus 528 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~ 605 (662)
T 3azo_A 528 ACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCP--PEQCDRFL 605 (662)
T ss_dssp SEEEEESCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--THHHHHHH
T ss_pred EEEEecCCccCHHHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCC--HHHHHHHH
Confidence 999999998763210 000 00 00111224567788889999999999999999999999999 99999999
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhccC
Q 002164 856 NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 856 ~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
++|+..|++++++++|+++|.+...++..++.+.+.+||.++|+..
T Consensus 606 ~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 606 EAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp HHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998766777889999999999999754
No 7
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=6.3e-49 Score=468.75 Aligned_cols=538 Identities=16% Similarity=0.147 Sum_probs=397.0
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+...+|||||++|||++. .++..+||.+ ++|+.++++...... +..++|||| ++++.. ....+.
T Consensus 23 ~~~~~~~~~DG~~la~~s~------~~g~~~lw~~--~~g~~~~lt~~~~~~----~~~~~~spd-~~l~~~-~~~~g~- 87 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGF------SEGSVNAYLY--DGGETVKLNREPINS----VLDPHYGVG-RVILVR-DVSKGA- 87 (582)
T ss_dssp CEEEEEEEETTTEEEEEEE------ETTEEEEEEE--ETTEEEECCSSCCSE----ECEECTTCS-EEEEEE-ECSTTS-
T ss_pred chheeecCCCCCeEEEEEc------cCCceeEEEE--cCCCcEeeecccccc----cccccCCCC-eEEEEe-ccCCCC-
Confidence 4778899999999999875 2356677775 689999998766322 668999999 655443 110000
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc--CCeeeecCCCccccccccCCCCcEEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIGPPAVYTSLDPSPDEKYIL 347 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~~l~~~~~~~~~~~SpDGk~l~ 347 (958)
...+||.+++ +|....++........+|||||+.++
T Consensus 88 ------------------------------------------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~ 125 (582)
T 3o4h_A 88 ------------------------------------------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVV 125 (582)
T ss_dssp ------------------------------------------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEE
T ss_pred ------------------------------------------cceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEE
Confidence 2346999998 77666776654445679999999998
Q ss_pred EEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc
Q 002164 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (958)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~ 427 (958)
+++... ..+.+||+++++.++++..+. ..+.|||||+.|++.....
T Consensus 126 ~~s~~~------------~~~~l~d~~~g~~~~l~~~~~---------------~~~~~spDG~~la~~~~~~------- 171 (582)
T 3o4h_A 126 FTGATE------------DRVALYALDGGGLRELARLPG---------------FGFVSDIRGDLIAGLGFFG------- 171 (582)
T ss_dssp EEEECS------------SCEEEEEEETTEEEEEEEESS---------------CEEEEEEETTEEEEEEEEE-------
T ss_pred EEecCC------------CCceEEEccCCcEEEeecCCC---------------ceEEECCCCCEEEEEEEcC-------
Confidence 887542 256699999988888775331 4788999999999863321
Q ss_pred ccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCcccc
Q 002164 428 EVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVY 507 (958)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 507 (958)
.....||++++ ++++.+.|+.....+..++|||||+.|+ .+..++ ..+||+++++++ +.. ++......+.
T Consensus 172 --~~~~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~~~~-~~~i~~~d~~~~--~~~-~~~~~~~~~~ 241 (582)
T 3o4h_A 172 --GGRVSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTA-GLETAR-EARLVTVDPRDG--SVE-DLELPSKDFS 241 (582)
T ss_dssp --TTEEEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEE-EEECSS-CEEEEEECTTTC--CEE-ECCCSCSHHH
T ss_pred --CCCeEEEEEcC---CCCCceEeecCCCccccceECCCCCEEE-EccCCC-eeEEEEEcCCCC--cEE-EccCCCcChh
Confidence 12246999995 7778888887777788999999999999 433332 368999999885 333 3333222222
Q ss_pred CCCCCCceE--------eccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCccccccee
Q 002164 508 SDPGSPMMR--------RTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (958)
Q Consensus 508 ~~~~~~~~~--------~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~ 579 (958)
. +. ||||| .+++..... ..+.+|++ |+..+.. .+ .+
T Consensus 242 ~------~~~~~~~~~~~spdg-~~~~~~~~~--------------------g~~~l~~~--g~~~~~~--~~-----~v 285 (582)
T 3o4h_A 242 S------YRPTAITWLGYLPDG-RLAVVARRE--------------------GRSAVFID--GERVEAP--QG-----NH 285 (582)
T ss_dssp H------HCCSEEEEEEECTTS-CEEEEEEET--------------------TEEEEEET--TEEECCC--SS-----EE
T ss_pred h------hhhccccceeEcCCC-cEEEEEEcC--------------------CcEEEEEE--CCeeccC--CC-----ce
Confidence 2 44 99999 666655321 14677777 5544311 11 11
Q ss_pred EeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCCCCCC---CCCCcEEEEEEEeCCCeEEEEEE
Q 002164 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQ---LASLQKELIKYQRKDGVQLSATL 656 (958)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~~~~---~~~~~~~~~~~~~~dg~~l~~~l 656 (958)
. .++|+ ||+ +++...+...|+++|+++..+ +.++| .+.. ......+.+++++.+|.++++++
T Consensus 286 ~-------~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~-~~~~l-----~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 350 (582)
T 3o4h_A 286 G-------RVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE-PLLEG-----GLPEDLRRSIAGSRLVWVESFDGSRVPTYV 350 (582)
T ss_dssp E-------EEEEE-TTE-EEEEEEETTEEEEEEEETTCC-EEECC-----CCCHHHHHTEEEEEEEEEECTTSCEEEEEE
T ss_pred E-------EEEec-CCE-EEEEEcCCCCCCeEEEEcCCC-ceEEE-----ecCCccccccCcceEEEEECCCCCEEEEEE
Confidence 1 24678 664 567788888899999998755 55555 1222 44456789999999999999999
Q ss_pred EecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---h
Q 002164 657 YLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---D 733 (958)
Q Consensus 657 ~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~---~ 733 (958)
+.|+++++ ++|+||++||+++.... ..| ...++.|+++||+|+++++++..|+|.++.. .
T Consensus 351 ~~p~~~~~----~~p~vv~~HG~~~~~~~---------~~~----~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~ 413 (582)
T 3o4h_A 351 LESGRAPT----PGPTVVLVHGGPFAEDS---------DSW----DTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIG 413 (582)
T ss_dssp EEETTSCS----SEEEEEEECSSSSCCCC---------SSC----CHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTT
T ss_pred EcCCCCCC----CCcEEEEECCCcccccc---------ccc----CHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhh
Confidence 99987533 48999999998643210 111 3457789999999999888888778877432 3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCC----Ccc-cccc
Q 002164 734 RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF----GFQ-NEDR 808 (958)
Q Consensus 734 ~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~----~~~-~~~~ 808 (958)
.+....++|+.++++++.+++.+| +++|+|||+||++++.++.++|++|+++|+.+|+.++..... .+. ....
T Consensus 414 ~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (582)
T 3o4h_A 414 DPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQ 491 (582)
T ss_dssp CTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHHH
Confidence 445677899999999999998887 999999999999999999999999999999999876321000 000 0000
Q ss_pred hhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHH
Q 002164 809 TLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLW 888 (958)
Q Consensus 809 ~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~ 888 (958)
.+..+.+.+...+|+.++.++++|+|++||++|.+|| +.++++++++|+..|++++++++|+++|.+...++..++++
T Consensus 492 ~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~ 569 (582)
T 3o4h_A 492 LTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTP--LKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILL 569 (582)
T ss_dssp HTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHH
T ss_pred HcCcCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcC--HHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHH
Confidence 1114567788899999999999999999999999999 99999999999999999999999999999876777889999
Q ss_pred HHHHHHHHhhcc
Q 002164 889 ETDRWLQKYCVS 900 (958)
Q Consensus 889 ~i~~fl~~~l~~ 900 (958)
.+.+||+++|+.
T Consensus 570 ~i~~fl~~~l~~ 581 (582)
T 3o4h_A 570 PAVFFLATQRER 581 (582)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 999999999863
No 8
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=1.1e-47 Score=468.21 Aligned_cols=584 Identities=12% Similarity=0.096 Sum_probs=406.2
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCc--cccccccceEEecCCeEEEEEecCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
+..| +|||++++|+.... +.....||+++..+++.+.|+..... ..+..+..++|||||++|+|.....+.
T Consensus 76 ~~~p--~~dG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~- 148 (710)
T 2xdw_A 76 YSCH--FKKGKRYFYFYNTG----LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGS- 148 (710)
T ss_dssp ECCC--EEETTEEEEEEECS----SCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTC-
T ss_pred CCCC--EEECCEEEEEEEcC----CceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCC-
Confidence 4445 49999999987532 33355899999888877755432210 001125689999999999998321110
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCCCCcEE
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l 346 (958)
...+|+++++ +|+...++.. ..+..++|||||+.|
T Consensus 149 -------------------------------------------~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l 185 (710)
T 2xdw_A 149 -------------------------------------------DWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGM 185 (710)
T ss_dssp -------------------------------------------SCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEE
T ss_pred -------------------------------------------ceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEE
Confidence 1237999999 8877665433 346789999999999
Q ss_pred EEEeecCCcc---ccccCCCCCceeEEEeccCceE--EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEecc
Q 002164 347 LISSIHRPYS---FIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (958)
Q Consensus 347 ~~~~~~~~~~---~~~~~~~~~~~i~l~d~~~~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 421 (958)
+|++...+.. ..........+|++|++.++.. +.+...+.. ......+.|||||+.|++......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~----------~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE----------PKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp EEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCEEEEEEECSS
T ss_pred EEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC----------CeEEEEEEEcCCCCEEEEEEEccC
Confidence 9998654310 0001112345799999986542 222221110 012357899999999998643210
Q ss_pred CCCcccccccCCeEEEEeCCCCCC------C--CceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCC
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQG------E--GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g------~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~ 493 (958)
.....||++++ ++ + ..+.|+...... ...|+|||+.|+|.++.+..+.+|+.++++++..
T Consensus 256 --------~~~~~l~~~d~---~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 256 --------DPVNRLWYCDL---QQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE 323 (710)
T ss_dssp --------SSCCEEEEEEG---GGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred --------CCccEEEEEEC---cccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 11457999996 33 2 466676544333 3469999999999988766567899999987521
Q ss_pred -CcEEEeccCC-ccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc-eEEEecC
Q 002164 494 -APRILFDRSS-EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS-KERIWES 570 (958)
Q Consensus 494 -~~~~~~~~~~-~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~-~~~l~~~ 570 (958)
..+.++.... ..+.+ +.|++++ .+++.... ....+|+++|+.+|+ .+.|...
T Consensus 324 ~~~~~l~~~~~~~~~~~------~~~~~~~-~lv~~~~~------------------~g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 324 SKWKVLVPEHEKDVLEW------VACVRSN-FLVLCYLH------------------DVKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp GGCEEEECCCSSCEEEE------EEEETTT-EEEEEEEE------------------TTEEEEEEEETTTCCEEEEECCC
T ss_pred ccceeccCCCCCCeEEE------EEEEcCC-EEEEEEEE------------------CCEEEEEEEECCCCCEEEecCCC
Confidence 1234433322 12222 6677555 45554421 123469999996665 4555433
Q ss_pred CcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCC--eeEeecCCCCCCCCCCCcEEEEEEEeCC
Q 002164 571 DKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK--SCQITDFPHPYPQLASLQKELIKYQRKD 648 (958)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~--~~~Lt~~~~~~~~~~~~~~~~~~~~~~d 648 (958)
.+. +. .+++++|++.+++..++...|..+|++++.+|+ .+.+........+...+..+.+++++.|
T Consensus 379 ~~~-----v~-------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d 446 (710)
T 2xdw_A 379 VGS-----VV-------GYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKD 446 (710)
T ss_dssp SSE-----EE-------EEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTT
T ss_pred Cce-----EE-------EEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCC
Confidence 221 11 245788999999999999999999999999988 7777764422123345678899999999
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCCCCCC
Q 002164 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEG 727 (958)
Q Consensus 649 g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~~G~G 727 (958)
|.+|++++++|+++... ++.|+||++||++.....+ .| ......|++ +||+|++++++++.++|
T Consensus 447 g~~i~~~~~~p~~~~~~--~~~P~vl~~hGg~~~~~~~---------~~----~~~~~~l~~~~G~~v~~~d~rG~g~~g 511 (710)
T 2xdw_A 447 GTKIPMFIVHKKGIKLD--GSHPAFLYGYGGFNISITP---------NY----SVSRLIFVRHMGGVLAVANIRGGGEYG 511 (710)
T ss_dssp SCEEEEEEEEETTCCCS--SCSCEEEECCCCTTCCCCC---------CC----CHHHHHHHHHHCCEEEEECCTTSSTTH
T ss_pred CCEEEEEEEecCCCCCC--CCccEEEEEcCCCCCcCCC---------cc----cHHHHHHHHhCCcEEEEEccCCCCCCC
Confidence 99999999999986433 3589999999986432210 11 123456788 99999998888776666
Q ss_pred Ccccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCC--
Q 002164 728 DEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-- 802 (958)
Q Consensus 728 ~~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~-- 802 (958)
..+.. .......+.|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++......
T Consensus 512 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~ 591 (710)
T 2xdw_A 512 ETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTI 591 (710)
T ss_dssp HHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT
T ss_pred hHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCC
Confidence 54322 2344567899999999999999999999999999999999999999999999999999999875432110
Q ss_pred ---cccccch--hhhcHHHHHhcCcccccC-----CCCC-CEEEEeeCCCCCCCCChHHHHHHHHHHHhC-------CCc
Q 002164 803 ---FQNEDRT--LWEATSTYVEMSPFMSAN-----KLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGH-------GAL 864 (958)
Q Consensus 803 ---~~~~~~~--~~~~~~~~~~~sp~~~~~-----~~~~-P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~-------g~~ 864 (958)
+....+. ..+..+.+..++|+.++. +++. |+||+||++|.+|| +.++.+++++|+.. |.+
T Consensus 592 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~ 669 (710)
T 2xdw_A 592 GHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVV--PLHSLKFIATLQYIVGRSRKQNNP 669 (710)
T ss_dssp GGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSC--THHHHHHHHHHHHHTTTSTTCCSC
T ss_pred ChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccC--hhHHHHHHHHHHhhhccccCCCcC
Confidence 0000001 112234566789999998 7886 99999999999999 99999999999987 899
Q ss_pred EEEEEeCCCCccCCCc-ccHHHHHHHHHHHHHHhhcc
Q 002164 865 CRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 865 ~~~~~~p~~~H~~~~~-~~~~~~~~~i~~fl~~~l~~ 900 (958)
+++++++++||++... ....+....+++||.++|+.
T Consensus 670 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 670 LLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp EEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999998654 34567888999999999864
No 9
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=2.1e-47 Score=464.33 Aligned_cols=579 Identities=15% Similarity=0.095 Sum_probs=404.3
Q ss_pred eecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCc--cccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002164 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (958)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~--~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (958)
..+|||++|+|+.... +.....||+++..+++.++|+..... .....+..++|||||++|+|+....+.
T Consensus 74 ~p~~dG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~----- 144 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHK----DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA----- 144 (695)
T ss_dssp CCEEETTEEEEEEECT----TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC-----
T ss_pred CCEEECCEEEEEEEcC----CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC-----
Confidence 3459999999988532 33467899999988888888753320 001126689999999999998322111
Q ss_pred CCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee---ecCCCccccccccCCCCcEEEE
Q 002164 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK---EIGPPAVYTSLDPSPDEKYILI 348 (958)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~---~l~~~~~~~~~~~SpDGk~l~~ 348 (958)
...+|+++++ +|+.. .+.. .....++|||||+.|+|
T Consensus 145 ---------------------------------------~~~~i~v~dl~tg~~~~~~~~~~-~~~~~~~wspDg~~l~~ 184 (695)
T 2bkl_A 145 ---------------------------------------DEAVLHVIDVDSGEWSKVDVIEG-GKYATPKWTPDSKGFYY 184 (695)
T ss_dssp ---------------------------------------SCCEEEEEETTTCCBCSSCCBSC-CTTCCCEECTTSSEEEE
T ss_pred ---------------------------------------ceEEEEEEECCCCCCcCCcccCc-ccccceEEecCCCEEEE
Confidence 1357999999 77654 1211 22368999999999999
Q ss_pred EeecCCccccccCCCCCceeEEEeccCceE--EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
++.+.+............+|++|++.++.. +.+...+.. ......+.|||||+.|++.....
T Consensus 185 ~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~l~~~~~~~------ 248 (695)
T 2bkl_A 185 EWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD----------PTTFLQSDLSRDGKYLFVYILRG------ 248 (695)
T ss_dssp EECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC----------TTCEEEEEECTTSCCEEEEEEET------
T ss_pred EEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC----------CEEEEEEEECCCCCEEEEEEeCC------
Confidence 986542100000111234799999986542 333332211 02335789999999999863321
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCC-cEEEeccC-Cc
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA-PRILFDRS-SE 504 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~-~~ 504 (958)
.....||+++. .+++.+.|+........+.| +||+ |++.++.+..+.+|+.++++++... .+.++... ..
T Consensus 249 ---~~~~~l~~~~~---~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 320 (695)
T 2bkl_A 249 ---WSENDVYWKRP---GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA 320 (695)
T ss_dssp ---TTEEEEEEECT---TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC
T ss_pred ---CCceEEEEEcC---CCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC
Confidence 02447888874 55677888766555556666 7888 8888776544578999999875211 13343322 11
Q ss_pred cccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecC
Q 002164 505 DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMS 584 (958)
Q Consensus 505 ~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~ 584 (958)
.+.+ ++|+ ++ .|++.... ....+|++++++++..+.+...... ..
T Consensus 321 ~l~~------~~~~-~~-~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~-----~v---- 365 (695)
T 2bkl_A 321 SLLS------VSIV-GG-HLSLEYLK------------------DATSEVRVATLKGKPVRTVQLPGVG-----AA---- 365 (695)
T ss_dssp EEEE------EEEE-TT-EEEEEEEE------------------TTEEEEEEEETTCCEEEECCCSSSS-----EE----
T ss_pred eEEE------EEEE-CC-EEEEEEEE------------------CCEEEEEEEeCCCCeeEEecCCCCe-----EE----
Confidence 1111 4565 44 45544421 1234799999876555555432111 01
Q ss_pred CCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCCCCCCCCCCcEEEEEEEeCCCeEEEEEEEecCCCCC
Q 002164 585 DQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDP 664 (958)
Q Consensus 585 ~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~ 664 (958)
..+++++|++.+++..++...|..+|++++.+++.+.|+..+.. .....+..+.+++++.||.++++++++|++++.
T Consensus 366 --~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~ 442 (695)
T 2bkl_A 366 --SNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHRKDLKR 442 (695)
T ss_dssp --CCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEETTCCC
T ss_pred --EEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEECCCCCC
Confidence 12467889999999999999999999999999998888876543 223446788999999999999999999998643
Q ss_pred CCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---hhhHHHHHH
Q 002164 665 SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVA 741 (958)
Q Consensus 665 ~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~---~~~~~~~~~ 741 (958)
. ++.|+||++|||+...... .|. .....|+++||+|+.+++++..++|..+.. .......++
T Consensus 443 ~--~~~p~vl~~hGg~~~~~~~---------~~~----~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~ 507 (695)
T 2bkl_A 443 D--GNAPTLLYGYGGFNVNMEA---------NFR----SSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFD 507 (695)
T ss_dssp S--SCCCEEEECCCCTTCCCCC---------CCC----GGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred C--CCccEEEEECCCCccccCC---------CcC----HHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHH
Confidence 3 3589999999986443211 121 123468899999999888887777765322 234567789
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCC-C----cccccchh--hhcH
Q 002164 742 CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF-G----FQNEDRTL--WEAT 814 (958)
Q Consensus 742 D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~-~----~~~~~~~~--~~~~ 814 (958)
|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++..... . +....+.+ .+..
T Consensus 508 D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~ 587 (695)
T 2bkl_A 508 DFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDF 587 (695)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHH
T ss_pred HHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999987543210 0 00000111 0122
Q ss_pred HHHHhcCcccccCCCC--CCEEEEeeCCCCCCCCChHHHHHHHHHHHh---CCCcEEEEEeCCCCccCCC-cccHHHHHH
Q 002164 815 STYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQSDRFFNALKG---HGALCRLVILPFESHGYAA-RESIMHVLW 888 (958)
Q Consensus 815 ~~~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~p~~~H~~~~-~~~~~~~~~ 888 (958)
+.+..++|+.++.+++ +|+||+||++|.+|| +.++.+++++|+. .|.+++++++|++||++.. .....+...
T Consensus 588 ~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 665 (695)
T 2bkl_A 588 KTLHAYSPYHHVRPDVRYPALLMMAADHDDRVD--PMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSV 665 (695)
T ss_dssp HHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSC--THHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHH
T ss_pred HHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCC--hHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHH
Confidence 4456789999999876 699999999999999 9999999999998 6889999999999999854 344667788
Q ss_pred HHHHHHHHhhccC
Q 002164 889 ETDRWLQKYCVSN 901 (958)
Q Consensus 889 ~i~~fl~~~l~~~ 901 (958)
.+++||.++|+..
T Consensus 666 ~~~~fl~~~l~~~ 678 (695)
T 2bkl_A 666 DLYSFLFQVLDVQ 678 (695)
T ss_dssp HHHHHHHHHTTC-
T ss_pred HHHHHHHHHcCCC
Confidence 8999999998653
No 10
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=1.6e-46 Score=455.06 Aligned_cols=576 Identities=13% Similarity=0.093 Sum_probs=400.3
Q ss_pred ecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCC---CccccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002164 196 WSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSP---DIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (958)
Q Consensus 196 wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~---~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (958)
.+++|.+++|..... .....-+|+...++++.. |.... ... ...+..++|||||++|+|+....+.
T Consensus 84 p~~~g~~~y~~~~~~----~~~~~~~~r~~~~~~~~v-llD~n~la~~~-~~~l~~~~~SpDg~~lAy~~~~~G~----- 152 (693)
T 3iuj_A 84 PFREGRYHYFFKNDG----LQNQNVLWRQQEGKPAEV-FLDPNTLSPDG-TTALDQLSFSRDGRILAYSLSLAGS----- 152 (693)
T ss_dssp CEEETTEEEEEEECS----SCSSCEEEEECTTSCCEE-EECGGGGSTTS-CCEEEEEEECTTSSEEEEEEECSSC-----
T ss_pred CEEECCEEEEEEEcC----CCceeEEEEeCCCCCcEE-EEehhhccCCC-cEEEEEEEECCCCCEEEEEEecCCC-----
Confidence 356899999876422 333446777665554433 32211 111 1126688999999999998322111
Q ss_pred CCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCCc-cccccccCCCCcEEEEEe
Q 002164 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPA-VYTSLDPSPDEKYILISS 350 (958)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~~-~~~~~~~SpDGk~l~~~~ 350 (958)
...+|+++|+ +|+........ ....++|| ||+.|+|++
T Consensus 153 ---------------------------------------~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~ 192 (693)
T 3iuj_A 153 ---------------------------------------DWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSS 192 (693)
T ss_dssp ---------------------------------------CEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEE
T ss_pred ---------------------------------------ceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEE
Confidence 2356999999 88765543322 25789999 999999998
Q ss_pred ecCCccccccCCCCCceeEEEeccCce--EEEeccCCc-cccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc
Q 002164 351 IHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPL-AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (958)
Q Consensus 351 ~~~~~~~~~~~~~~~~~i~l~d~~~~~--~~~l~~~~~-~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~ 427 (958)
.+.+............+|++|++.+.. .+.+...+. .. ....++.|||||+.|++.....
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~----------~~~~~~~~SpDg~~l~~~~~~~------- 255 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH----------HRYVGATVTEDDRFLLISAANS------- 255 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGC----------CSEEEEEECTTSCEEEEEEESS-------
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCC----------eEEEEEEEcCCCCEEEEEEccC-------
Confidence 664311111111234589999987543 234443321 10 1234688999999998863321
Q ss_pred ccccCCeEEEEeCCCCCCC--CceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCC-cEEEeccCCc
Q 002164 428 EVTPRDIIYTQQAEPVQGE--GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA-PRILFDRSSE 504 (958)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~ 504 (958)
.....||++++ +++ +.+.|+........+ |+++|++|+|.++.+..+.+|+.++++++... .+.+......
T Consensus 256 --~~~~~i~~~d~---~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 256 --TSGNRLYVKDL---SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp --SSCCEEEEEET---TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred --CCCcEEEEEEC---CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC
Confidence 12358999996 333 566776544333333 89999999999887765689999999885321 1333322221
Q ss_pred cccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecC
Q 002164 505 DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMS 584 (958)
Q Consensus 505 ~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~ 584 (958)
. +.|+++|++|++..... ...+|+++|++++..+.+.-.... ...
T Consensus 330 ~---------~~~s~~g~~lv~~~~~~------------------g~~~l~~~d~~g~~~~~l~~p~~~-----~~~--- 374 (693)
T 3iuj_A 330 V---------LTVHSGSGYLFAEYMVD------------------ATARVEQFDYEGKRVREVALPGLG-----SVS--- 374 (693)
T ss_dssp C---------EEEEEETTEEEEEEEET------------------TEEEEEEECTTSCEEEEECCSSSS-----EEE---
T ss_pred E---------EEEEEECCEEEEEEEEC------------------CeeEEEEEECCCCeeEEeecCCCc-----eEE---
Confidence 1 36899999999887431 234799999998777766543321 111
Q ss_pred CCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCCCCCCCCCCcEEEEEEEeCCCeEEEEEEEecCCCCC
Q 002164 585 DQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDP 664 (958)
Q Consensus 585 ~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~ 664 (958)
.+++++|++.+++..++...|..+|.+++.+++.++|+..+..+ ....+..+.+++++.||.+|++++++|++++.
T Consensus 375 ---~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~ 450 (693)
T 3iuj_A 375 ---GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAPF-KPEDYVSEQRFYQSKDGTRVPLIISYRKGLKL 450 (693)
T ss_dssp ---ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSSC-CGGGEEEEEEEEECTTSCEEEEEEEEESSCCC
T ss_pred ---eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCCc-ChhhCeeEEEEEecCCCcEEEEEEEecCCCCC
Confidence 23567899999999999999999999999999999998766433 23446789999999999999999999997643
Q ss_pred CCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---hhhHHHHHH
Q 002164 665 SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQLVA 741 (958)
Q Consensus 665 ~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~---~~~~~~~~~ 741 (958)
. ++.|+||++|||+..... ..| ....+.|+++||+|+.+++++..++|..+.. .......++
T Consensus 451 ~--~~~P~ll~~hGg~~~~~~---------~~~----~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~ 515 (693)
T 3iuj_A 451 D--GSNPTILYGYGGFDVSLT---------PSF----SVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFD 515 (693)
T ss_dssp S--SCCCEEEECCCCTTCCCC---------CCC----CHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred C--CCccEEEEECCCCCcCCC---------Ccc----CHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHH
Confidence 3 358999999998643211 112 1335688999999999999888777765432 234456789
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCC-C----cccccchhhh--c-
Q 002164 742 CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF-G----FQNEDRTLWE--A- 813 (958)
Q Consensus 742 D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~-~----~~~~~~~~~~--~- 813 (958)
|+.++++||++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++..... . +....+.+.. .
T Consensus 516 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~ 595 (693)
T 3iuj_A 516 DFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAM 595 (693)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHHH
T ss_pred HHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHHH
Confidence 999999999999999999999999999999999999999999999999999988543211 0 0000011111 1
Q ss_pred HHHHHhcCcccccCC-CCCC-EEEEeeCCCCCCCCChHHHHHHHHHHHhC---CCcEEEEEeCCCCccCCCc-ccHHHHH
Q 002164 814 TSTYVEMSPFMSANK-LKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKGH---GALCRLVILPFESHGYAAR-ESIMHVL 887 (958)
Q Consensus 814 ~~~~~~~sp~~~~~~-~~~P-~Lii~G~~D~~v~~~~~~~~~~~~~l~~~---g~~~~~~~~p~~~H~~~~~-~~~~~~~ 887 (958)
.+.+..++|+.++.+ ++.| +||+||++|.+|| +.++.+++++|+.. |+++++++++++||++... ....+..
T Consensus 596 ~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 673 (693)
T 3iuj_A 596 FDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVV--PAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQS 673 (693)
T ss_dssp HHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSC--THHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHH
T ss_pred HHHHHhcCHHHhhcccCCCCceeEEecCCCCCCC--hhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHH
Confidence 234667899999999 8987 9999999999999 99999999999987 5899999999999998653 5567788
Q ss_pred HHHHHHHHHhhccC
Q 002164 888 WETDRWLQKYCVSN 901 (958)
Q Consensus 888 ~~i~~fl~~~l~~~ 901 (958)
..+.+||.++|+..
T Consensus 674 ~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 674 ADIYAFTLYEMGYR 687 (693)
T ss_dssp HHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCC
Confidence 89999999999754
No 11
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=5.5e-46 Score=454.96 Aligned_cols=580 Identities=14% Similarity=0.092 Sum_probs=392.7
Q ss_pred eecCCCCeEEEEEeeccccCCCCCceEEEEEcC---CCceeeccCCCCc--cccccccceEEecCCeEEEEEecCCCCCC
Q 002164 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD---TGKARPLFQSPDI--YLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~---~g~~~~lt~~~~~--~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
..+|||++++|+.... +.....||+++.. +++.+.|+..... .....+..++|||||++|+|.....+.
T Consensus 113 ~p~pdG~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~-- 186 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSG----LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS-- 186 (741)
T ss_dssp CCEEETTEEEEEEECS----SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC--
T ss_pred CCEEECCEEEEEEEcC----CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC--
Confidence 3459999999988532 3336789999987 7777775432210 001125689999999999998321100
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYIL 347 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~ 347 (958)
...+|+++++ +|+....... ..+..++|||| +.|+
T Consensus 187 ------------------------------------------e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 187 ------------------------------------------DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALL 223 (741)
T ss_dssp ------------------------------------------SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEE
T ss_pred ------------------------------------------ceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEE
Confidence 1256999999 8876554322 33468999999 9999
Q ss_pred EEeecCCcc-ccccCCCCCceeEEEeccCceE--EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 348 ISSIHRPYS-FIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 348 ~~~~~~~~~-~~~~~~~~~~~i~l~d~~~~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
|++...+.. ..........+|++|++.++.. +.+...+.. ......+.|||||+.|++......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----------~~~~~~~~~SpDG~~l~~~~~~~~--- 290 (741)
T 1yr2_A 224 YSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL----------PKRGHGASVSSDGRWVVITSSEGT--- 290 (741)
T ss_dssp EEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC----------TTCEEEEEECTTSCEEEEEEECTT---
T ss_pred EEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC----------CeEEEEEEECCCCCEEEEEEEccC---
Confidence 998654310 0001112345799999875432 233222111 012457899999999998643210
Q ss_pred cccccccCCeEEEEeCCCCCCC--C-ceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecc
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGE--G-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~--~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 501 (958)
.....||++++ +++ + .+.|.........+ ++|||+.|++.++.+..+.+||+++++++....+.++..
T Consensus 291 -----~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~ 361 (741)
T 1yr2_A 291 -----DPVNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE 361 (741)
T ss_dssp -----CSCCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC
T ss_pred -----CCcceEEEEEC---CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC
Confidence 13457999996 554 5 67776544333334 569999999998876656889999988742122333322
Q ss_pred CCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEe
Q 002164 502 SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVA 581 (958)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~ 581 (958)
....+.+ ++|+ +..|++.... ....+|++++++++..+.+...... .+.
T Consensus 362 ~~~~l~~------~~~~--~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~----~v~- 410 (741)
T 1yr2_A 362 SKDNLES------VGIA--GNRLFASYIH------------------DAKSQVLAFDLDGKPAGAVSLPGIG----SAS- 410 (741)
T ss_dssp CSSEEEE------EEEE--BTEEEEEEEE------------------TTEEEEEEEETTSCEEEECBCSSSC----EEE-
T ss_pred CCCeEEE------EEEE--CCEEEEEEEE------------------CCEEEEEEEeCCCCceeeccCCCCe----EEE-
Confidence 2211111 3444 4456555422 1234799999876656666532211 111
Q ss_pred ecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCCCCCCCCCCcEEEEEEEeCCCeEEEEEEEecCC
Q 002164 582 LMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPG 661 (958)
Q Consensus 582 ~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~l~~P~~ 661 (958)
.+++++|++.+++..++...|..+|++++.+++.+.|+.... ..+...+..+.+++++.||.+++++++.|++
T Consensus 411 ------~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~~-~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~~ 483 (741)
T 1yr2_A 411 ------GLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVHL-TFDPADFRVEQVFYPSKDGTKVPMFIVRRKD 483 (741)
T ss_dssp ------EEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCCC-SSCGGGEEEEEEEEECTTSCEEEEEEEEETT
T ss_pred ------EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCC-CCChhHCEEEEEEEEcCCCCEEEEEEEecCC
Confidence 246788999999999999999999999999998777776322 1233456788999999999999999999987
Q ss_pred CCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---hhhHHH
Q 002164 662 YDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---DRFVEQ 738 (958)
Q Consensus 662 ~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~---~~~~~~ 738 (958)
+ .++.|+||++||++.....+ .| ......|+++||+|+.+++++..++|..+.. ......
T Consensus 484 ~----~~~~p~vl~~hGg~~~~~~~---------~~----~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~ 546 (741)
T 1yr2_A 484 A----KGPLPTLLYGYGGFNVALTP---------WF----SAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQN 546 (741)
T ss_dssp C----CSCCCEEEECCCCTTCCCCC---------CC----CHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHH
T ss_pred C----CCCCcEEEEECCCCCccCCC---------Cc----CHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCC
Confidence 5 23589999999986432210 11 1335578899999999888877766654322 223356
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCC-C----cccccchhh--
Q 002164 739 LVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF-G----FQNEDRTLW-- 811 (958)
Q Consensus 739 ~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~-~----~~~~~~~~~-- 811 (958)
.++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++..... . +....+.+.
T Consensus 547 ~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~ 626 (741)
T 1yr2_A 547 VFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPEKE 626 (741)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTTSH
T ss_pred cHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCCCH
Confidence 789999999999999999999999999999999999999999999999999999987543110 0 000001111
Q ss_pred hcHHHHHhcCcccccCC-CCC-CEEEEeeCCCCCCCCChHHHHHHHHHHHh---CCCcEEEEEeCCCCccCCCc-ccHHH
Q 002164 812 EATSTYVEMSPFMSANK-LKK-PILLVHGEEDNNSGTLTMQSDRFFNALKG---HGALCRLVILPFESHGYAAR-ESIMH 885 (958)
Q Consensus 812 ~~~~~~~~~sp~~~~~~-~~~-P~Lii~G~~D~~v~~~~~~~~~~~~~l~~---~g~~~~~~~~p~~~H~~~~~-~~~~~ 885 (958)
+..+.+..++|+.++.+ +++ |+||+||++|.+|| +.++.+++++|+. .|.++++++++++||++... ....+
T Consensus 627 ~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~--~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~ 704 (741)
T 1yr2_A 627 ADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVV--PGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIE 704 (741)
T ss_dssp HHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSC--THHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHH
T ss_pred HHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCC--hhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHH
Confidence 12344577899999997 885 99999999999999 9999999999999 88999999999999997543 33467
Q ss_pred HHHHHHHHHHHhhccCC
Q 002164 886 VLWETDRWLQKYCVSNT 902 (958)
Q Consensus 886 ~~~~i~~fl~~~l~~~~ 902 (958)
....+++||.++++...
T Consensus 705 ~~~~~~~fl~~~l~~~~ 721 (741)
T 1yr2_A 705 ETADVQAFLAHFTGLTP 721 (741)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 88899999999996543
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=2e-43 Score=429.99 Aligned_cols=574 Identities=13% Similarity=0.054 Sum_probs=389.0
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEc---CCC--ceeeccCCCC---ccccccccceEEe-cCCeEEEE
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV---DTG--KARPLFQSPD---IYLNAIFDNFVWV-NNSTLLVC 260 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~---~~g--~~~~lt~~~~---~~~~~~~~~~~ws-pDG~~l~~ 260 (958)
..+.|. ++|++++|++... +.....+|+.+. .++ ..+.+..... ..-...+..++|| |||++|+|
T Consensus 118 ~~~~p~--~~g~~~yy~~~~~----g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy 191 (751)
T 2xe4_A 118 DMSAPY--VYGKYRYYTREVK----GKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAF 191 (751)
T ss_dssp EECCCE--EETTEEEEEEECT----TCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEE
T ss_pred cCCCCe--EECCEEEEEEECC----CCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEE
Confidence 445554 6899999987522 333456888886 554 4444432210 0000014579999 99999999
Q ss_pred EecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC-eeeecCCC--ccccc
Q 002164 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVKEIGPP--AVYTS 336 (958)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g-~~~~l~~~--~~~~~ 336 (958)
+....+. ...+||++++ +| +. +... .....
T Consensus 192 ~~~~~G~--------------------------------------------~~~~l~v~dl~~g~~~--l~~~~~~~~~~ 225 (751)
T 2xe4_A 192 SVDMSGN--------------------------------------------EVYTIEFKRISDPSQT--IADKVSGTNGE 225 (751)
T ss_dssp EEESSSS--------------------------------------------SCEEEEEEETTCTTCC--CCCCEEEECSC
T ss_pred EEeCCCC--------------------------------------------ceEEEEEEECCCCCEe--CCccccCceee
Confidence 8321110 1246999999 77 52 2222 33568
Q ss_pred cccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE--EEeccCCccccCcccccccccCcceeeeecCCCCce
Q 002164 337 LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (958)
Q Consensus 337 ~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~ 414 (958)
+.|||||+.|+|++.+.. ....+|+++++.++.. +.+...+.. .....+.|||||+.|+
T Consensus 226 ~~WspDg~~l~y~~~d~~--------~~~~~v~~~~lgt~~~~~~lv~~~~~~-----------~~~~~~~~SpDg~~l~ 286 (751)
T 2xe4_A 226 IVWGPDHTSLFYVTKDET--------LRENKVWRHVMGKLQSEDVCLYEEHNP-----------LFSAFMYKAADTNTLC 286 (751)
T ss_dssp CEECSSTTEEEEEEECTT--------CCEEEEEEEETTSCGGGCEEEEECCCT-----------TCEEEEEECTTSSEEE
T ss_pred EEEecCCCEEEEEEECCC--------CCCCEEEEEECCCCchhcEEEEecCCC-----------ceEEEEEECCCCCEEE
Confidence 999999999999985421 1224799999876532 233221100 1124678999999999
Q ss_pred EEEEeccCCCcccccccCCeEEEEeCCCCCCC--Cc--eEEEeeccccCceeeecC---CceEEEEEecc-ccceEEEEE
Q 002164 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE--GP--EILHKLDLRYGGISWCDD---SLALVYESWYK-TRRTRTWVI 486 (958)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~--~~--~~l~~~~~~~~~~~~spD---g~~l~~~~~~~-~~~~~l~~~ 486 (958)
+.... .....||++++ +++ +. +.+.... ..+.|+++ |+.|+|.++.+ ..+.+||.+
T Consensus 287 ~~~~~----------~~~~~l~~~d~---~~~~~~~~~~~l~~~~---~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~ 350 (751)
T 2xe4_A 287 IGSQS----------PETAEVHLLDL---RKGNAHNTLEIVRPRE---KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIA 350 (751)
T ss_dssp EEEEC----------SSCEEEEEEES---SSCTTCCCEEESSCCC---TTCCEEEEEETTTEEEEEECTTTCTTCEEEEE
T ss_pred EEecC----------CCCceEEEEEC---CCCCCCceeEEeecCC---CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEE
Confidence 97432 23457999996 433 34 4454322 34567777 99999998876 455799999
Q ss_pred cCCCCCCCcE-EEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEEC------
Q 002164 487 SPGSKDVAPR-ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDI------ 559 (958)
Q Consensus 487 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl------ 559 (958)
+++++..-.. ++.......+ ..+++++++|++.... ....+|+++|+
T Consensus 351 d~~~~~~~~~~li~~~~~~~l--------~~~~~~~~~lv~~~~~------------------~g~~~l~~~dl~~~~~~ 404 (751)
T 2xe4_A 351 PRGQPSDWSHVLVDHSEDVFM--------ESIAVRSNYLVVAGRR------------------AGLTRIWTMMADSQDGV 404 (751)
T ss_dssp ETTSTTCCCCEEECCCSSEEE--------EEEEECSSEEEEEEEE------------------TTEEEEEEEECCTTTSC
T ss_pred cCCCcccceeeEECCCCCcEE--------EEEEEECCEEEEEEEe------------------CCEEEEEEEeccccccc
Confidence 9875311122 2322111011 2356667788777642 12347999996
Q ss_pred -CCCc-eEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCCC-CCCCCC
Q 002164 560 -NTGS-KERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHP-YPQLAS 636 (958)
Q Consensus 560 -~~g~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~-~~~~~~ 636 (958)
++++ .++|.-.... ....+ + ....+++|++.+++..++...|+.+|.+++.+++.++|++.+.. ......
T Consensus 405 ~~~g~~~~~l~l~~~~----~~~~~-~--~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~~~~~ 477 (751)
T 2xe4_A 405 FKAGTGLREVVMEEPI----FTVHL-V--ESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDAAN 477 (751)
T ss_dssp CCTTTCCEECCCCCSS----CEEEE-C--GGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTCCGGG
T ss_pred ccCCccceEECCCCce----eEEEe-c--cCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCCCccc
Confidence 5666 6666432211 01111 0 00001568889999999999999999999999998999876532 122234
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
+..+.+++++.||.+|++++++|+++++. +++|+||++|||+...... .|. ...+.|+++||+|+
T Consensus 478 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~--~~~P~vl~~HGg~~~~~~~---------~~~----~~~~~l~~~G~~v~ 542 (751)
T 2xe4_A 478 YKVERRFATAPDQTKIPLSVVYHKDLDMS--QPQPCMLYGYGSYGLSMDP---------QFS----IQHLPYCDRGMIFA 542 (751)
T ss_dssp EEEEEEEEECTTCCEEEEEEEEETTSCTT--SCCCEEEECCCCTTCCCCC---------CCC----GGGHHHHTTTCEEE
T ss_pred eEEEEEEEECCCCcEEEEEEEcCCCCCCC--CCccEEEEECCCCCcCCCC---------cch----HHHHHHHhCCcEEE
Confidence 56889999999999999999999886433 3589999999986432211 121 12457889999999
Q ss_pred EcCCCCCCCCCCcccc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEecc
Q 002164 717 GGPTTPIIGEGDEEAN----DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~----~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (958)
.++++++.++|..+.. .......++|+.++++||++++++|++||+|+|+|+||+++++++.++|++|+|+|+.+|
T Consensus 543 ~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~ 622 (751)
T 2xe4_A 543 IAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVP 622 (751)
T ss_dssp EECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESC
T ss_pred EEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCC
Confidence 9999888888765432 233457899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC------CCC--cccccchhhhcH---HHHHhcCcccccCCCCCC-EEEEeeCCCCCCCCChHHHHHHHHHHHh
Q 002164 793 AYNRTLT------PFG--FQNEDRTLWEAT---STYVEMSPFMSANKLKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKG 860 (958)
Q Consensus 793 ~~~~~~~------~~~--~~~~~~~~~~~~---~~~~~~sp~~~~~~~~~P-~Lii~G~~D~~v~~~~~~~~~~~~~l~~ 860 (958)
+.++... ++. .....+.+ .++ +.+..++|+.++.++++| +||+||++|.+|| +.++.+++++|+.
T Consensus 623 ~~d~~~~~~~~~~~~~~~~~~~~g~p-~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp--~~~~~~~~~~L~~ 699 (751)
T 2xe4_A 623 FVDVMTTMCDPSIPLTTGEWEEWGNP-NEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVA--YWEPAKWVSKLRE 699 (751)
T ss_dssp CCCHHHHHTCTTSTTHHHHTTTTCCT-TSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSC--THHHHHHHHHHHH
T ss_pred cchHHhhhcccCcccchhhHHHcCCC-CCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCC--HHHHHHHHHHHHh
Confidence 8773211 100 00011111 122 345678999999999997 9999999999999 9999999999998
Q ss_pred CC---CcEEEEEeCCCCccCCCcc-cHHHHHHHHHHHHHHhhccC
Q 002164 861 HG---ALCRLVILPFESHGYAARE-SIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 861 ~g---~~~~~~~~p~~~H~~~~~~-~~~~~~~~i~~fl~~~l~~~ 901 (958)
.+ .++.+.++|+++|++.... +.......+++||.++|+..
T Consensus 700 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~ 744 (751)
T 2xe4_A 700 CKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKST 744 (751)
T ss_dssp HCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCC
Confidence 84 4667777899999986432 44566778999999998643
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=2.9e-35 Score=348.58 Aligned_cols=320 Identities=13% Similarity=0.081 Sum_probs=248.3
Q ss_pred CeEEEEECCCCc--eEE-EecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCC
Q 002164 552 PFLDLFDINTGS--KER-IWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFP 628 (958)
Q Consensus 552 ~~L~~~dl~~g~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~ 628 (958)
.+|+++|+++|+ .+. +.-.... .+. ..+.+++++.+++..++...|+.+|++++. ++.++|+..+
T Consensus 372 ~~l~~~~~~~g~~~~~~~i~lp~~~----~~~-------~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~ 439 (711)
T 4hvt_A 372 AKVVTFTLENEQWTKPVVLKLPYQN----AIF-------GMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKAL 439 (711)
T ss_dssp EEEEEECEETTEECCCEEECCCSTT----CEE-------EEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCS
T ss_pred EEEEEEECCCCceEEEeccCCCCCe----EEE-------EEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCC
Confidence 468899987764 344 3222111 011 123457888999999999999999999988 8888898876
Q ss_pred CCCCCCCCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHH
Q 002164 629 HPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW 708 (958)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 708 (958)
..+. ...+..+.+++++.||.+|++++++|+++++. +++|+||++|||+...... .| .....+.|
T Consensus 440 ~~~~-~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~--~~~P~vl~~HGG~~~~~~~---------~~---~~~~~q~l 504 (711)
T 4hvt_A 440 YSFD-SENYVLEQKEATSFDGVKIPYFLVYKKGIKFD--GKNPTLLEAYGGFQVINAP---------YF---SRIKNEVW 504 (711)
T ss_dssp SCCC-GGGEEEEEEEEECTTSCEEEEEEEEETTCCCS--SCCCEEEECCCCTTCCCCC---------CC---CHHHHHHT
T ss_pred cccC-cccCeeEEEEEECCCCeEEEEEEEecCCCCCC--CCccEEEEECCCCCCCCCC---------cc---cHHHHHHH
Confidence 5433 23347889999999999999999999986543 3599999999987543211 11 11223578
Q ss_pred HHCCcEEEEcCCCCCCCCCCccc---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee
Q 002164 709 LARGFAILGGPTTPIIGEGDEEA---NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFC 785 (958)
Q Consensus 709 a~~G~~vl~~~~~~~~G~G~~~~---~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 785 (958)
+++||+|+.++++++.|+|..+. ........++|+.++++||++++++|++||+|+|+|+||+++++++.++|++|+
T Consensus 505 a~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~ 584 (711)
T 4hvt_A 505 VKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFG 584 (711)
T ss_dssp GGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCS
T ss_pred HHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceE
Confidence 99999999999998888887643 344567889999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCC-----cccccchhh--hcHHHHHhcCcccccCCCCC--CEEEEeeCCCCCCCCChHHHHHHHH
Q 002164 786 CGIARSGAYNRTLTPFG-----FQNEDRTLW--EATSTYVEMSPFMSANKLKK--PILLVHGEEDNNSGTLTMQSDRFFN 856 (958)
Q Consensus 786 a~v~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~sp~~~~~~~~~--P~Lii~G~~D~~v~~~~~~~~~~~~ 856 (958)
|+|+.+|++++...... +....+.++ +..+.+..++|+.++.++++ |+||+||++|.+|| +.++.++++
T Consensus 585 a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp--~~~s~~~~~ 662 (711)
T 4hvt_A 585 AVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVH--PWHGRIFEY 662 (711)
T ss_dssp EEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSC--THHHHHHHH
T ss_pred EEEEeCCccchhhhhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCC--hHHHHHHHH
Confidence 99999999886432110 000111111 23355778899999999987 99999999999999 999999999
Q ss_pred HH-HhCCCcEEEEEeCCCCccCCCc-ccHHHHHHHHHHHHHHhhcc
Q 002164 857 AL-KGHGALCRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 857 ~l-~~~g~~~~~~~~p~~~H~~~~~-~~~~~~~~~i~~fl~~~l~~ 900 (958)
+| +..|++++++++|+++|++... .........+.+||.++|+.
T Consensus 663 aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 663 VLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp HHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCC
Confidence 99 9999999999999999998543 34556777899999999864
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=2.4e-23 Score=234.10 Aligned_cols=344 Identities=13% Similarity=0.098 Sum_probs=216.2
Q ss_pred CceeeeccCCCC---CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEec
Q 002164 177 GQEIEIQGFPDG---AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN 253 (958)
Q Consensus 177 ~~~~~lt~~~~~---~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp 253 (958)
+..++|+..+.. .....|+|||||++|+|... .++..+||++++++|+.++++...... +..+.|||
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~------~~g~~~l~~~d~~~g~~~~lt~~~~~~----~~~~~~sp 90 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGA------FDGPWNYYLLDLNTQVATQLTEGRGDN----TFGGFLSP 90 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEEC------TTSSCEEEEEETTTCEEEECCCSSCBC----SSSCEECT
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEc------CCCCceEEEEeCCCCceEEeeeCCCCC----ccceEEcC
Confidence 566777653311 12234999999999999874 345779999999999999998766542 33678999
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-
Q 002164 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP- 331 (958)
Q Consensus 254 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~- 331 (958)
||+.|+|.. ....||++++ +|+.+.+...
T Consensus 91 dg~~l~~~~-------------------------------------------------~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 91 DDDALFYVK-------------------------------------------------DGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp TSSEEEEEE-------------------------------------------------TTTEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEe-------------------------------------------------CCCeEEEEECCCCcceeeeech
Confidence 999999882 1236999999 8876665543
Q ss_pred -ccc--cccccCCCCcEEEEEeecCCccccc---------cCCCCCceeEEEeccCceEEEeccCCccccCccccccccc
Q 002164 332 -AVY--TSLDPSPDEKYILISSIHRPYSFIV---------PCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRK 399 (958)
Q Consensus 332 -~~~--~~~~~SpDGk~l~~~~~~~~~~~~~---------~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~ 399 (958)
... ..+.++|||+.|+............ ........|+++|+++++.+.++... .
T Consensus 122 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-------------~ 188 (388)
T 3pe7_A 122 AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-------------Q 188 (388)
T ss_dssp TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-------------S
T ss_pred hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-------------c
Confidence 222 2234599999998654321100000 00112358999999988888776532 2
Q ss_pred Ccceeeeec-CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec--cccCceeeecCCceEEEEEec
Q 002164 400 GMRSINWRS-DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD--LRYGGISWCDDSLALVYESWY 476 (958)
Q Consensus 400 ~~~~~~~sp-DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~--~~~~~~~~spDg~~l~~~~~~ 476 (958)
....+.||| ||+.|+|..+... ......||+++. +++..+.++... ..+..+.|||||+.|+|.+..
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~-------~~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPH-------DLVDARMWLINE---DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCT-------TTSSCSEEEEET---TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred cccccEECCCCCCEEEEEEecCC-------CCCcceEEEEeC---CCCceEEeeeCCCCcccccceECCCCCEEEEEecC
Confidence 245789999 9999999643110 012447999985 777777776544 245678999999999998875
Q ss_pred ccc-ceEEEEEcCCCCCCCcEEEeccCCcc-ccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeE
Q 002164 477 KTR-RTRTWVISPGSKDVAPRILFDRSSED-VYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (958)
Q Consensus 477 ~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 554 (958)
.+. ...||+++++++ +.+.+....... ...... ...|||||++|++..... .+. .......|
T Consensus 259 ~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~--~~~~spdg~~l~~~~~~~-----------~~~-~~~~~~~i 322 (388)
T 3pe7_A 259 KGSPDRFIYSADPETL--ENRQLTSMPACSHLMSNYD--GSLMVGDGSDAPVDVQDD-----------SGY-KIENDPFL 322 (388)
T ss_dssp TTCCCEEEEEECTTTC--CEEEEEEECCEEEEEECTT--SSEEEEEECCC------------------------CCCCEE
T ss_pred CCCCcceEEEEecCCC--ceEEEEcCCCceeeeecCC--CCeEccCCCcceeEeeec-----------ccc-ccCCCCEE
Confidence 543 246999999986 333443322100 000000 146999999999875310 000 01123479
Q ss_pred EEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002164 555 DLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (958)
Q Consensus 555 ~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~ 620 (958)
++||+++++.++|+..... +......-......++|||||+.+++..... ...+||+++++++.
T Consensus 323 ~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 323 YVFNMKNGTQHRVARHDTS-WKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPESV 386 (388)
T ss_dssp EEEETTTTEEEEEEECCCC-CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGGG
T ss_pred EEEeccCCceEEeccccCc-ccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChhc
Confidence 9999999999888876531 0000000000123468999999999887654 45679999987654
No 15
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=2.6e-23 Score=233.82 Aligned_cols=329 Identities=13% Similarity=0.097 Sum_probs=206.4
Q ss_pred CCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCc
Q 002164 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (958)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~ 190 (958)
...++|||||++|+|.+.. ++ . .+||++++.+ +..++++... +..
T Consensus 38 ~~~~~~SpDg~~l~~~~~~----------------------~g--~------~~l~~~d~~~----g~~~~lt~~~-~~~ 82 (388)
T 3pe7_A 38 FYQKCFTRDGSKLLFGGAF----------------------DG--P------WNYYLLDLNT----QVATQLTEGR-GDN 82 (388)
T ss_dssp TTSCCBCTTSCEEEEEECT----------------------TS--S------CEEEEEETTT----CEEEECCCSS-CBC
T ss_pred hcCccCCCCCCEEEEEEcC----------------------CC--C------ceEEEEeCCC----CceEEeeeCC-CCC
Confidence 3458999999999999863 11 1 2699999855 6677776422 123
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEE--ecCCeEEEEEecCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW--VNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~w--spDG~~l~~~~~~~~~~ 268 (958)
...+.|||||++|+|... ...||++++++|+.++++..+... .....| +|||+.|+.........
T Consensus 83 ~~~~~~spdg~~l~~~~~---------~~~l~~~d~~~g~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~~~~~~~ 149 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKD---------GRNLMRVDLATLEENVVYQVPAEW----VGYGTWVANSDCTKLVGIEIRREDW 149 (388)
T ss_dssp SSSCEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECCTTE----EEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred ccceEEcCCCCEEEEEeC---------CCeEEEEECCCCcceeeeechhhc----ccccceeECCCCCeeccccccCccc
Confidence 447899999999999763 458999999999998887665532 223334 79999888652110000
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCC-CCcE
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSP-DEKY 345 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~Sp-DGk~ 345 (958)
.....+... ..........+|+++++ +|+.+.++.. ..+..+.||| ||++
T Consensus 150 ---------------------~~~~~~~~~------~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~ 202 (388)
T 3pe7_A 150 ---------------------VPLTDWKKF------HEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDST 202 (388)
T ss_dssp ---------------------CCCCSHHHH------HHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEE
T ss_pred ---------------------ccccccchh------hhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCE
Confidence 000000000 00000113468999999 8888888765 5678899999 9999
Q ss_pred EEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCc
Q 002164 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (958)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 425 (958)
|+|...... .....+|++++++++..+.++..... .....+.|||||+.|+|......
T Consensus 203 l~~~~~~~~-------~~~~~~l~~~d~~~~~~~~l~~~~~~-----------~~~~~~~~spdg~~l~~~~~~~~---- 260 (388)
T 3pe7_A 203 VAFCHEGPH-------DLVDARMWLINEDGTNMRKVKTHAEG-----------ESCTHEFWVPDGSALVYVSYLKG---- 260 (388)
T ss_dssp EEEEECSCT-------TTSSCSEEEEETTSCCCEESCCCCTT-----------EEEEEEEECTTSSCEEEEEEETT----
T ss_pred EEEEEecCC-------CCCcceEEEEeCCCCceEEeeeCCCC-----------cccccceECCCCCEEEEEecCCC----
Confidence 999985321 01134899999998887777653210 11346789999999998644311
Q ss_pred ccccccCCeEEEEeCCCCCCCCceEEEeecc------ccCceeeecCCceEEEEEecc-----ccceEEEEEcCCCCCCC
Q 002164 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYK-----TRRTRTWVISPGSKDVA 494 (958)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~------~~~~~~~spDg~~l~~~~~~~-----~~~~~l~~~~~~~~~~~ 494 (958)
.....||++++ ++++.+.++.... ....+.|||||+.|++..... .....||+++++++ +
T Consensus 261 ----~~~~~l~~~d~---~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~ 331 (388)
T 3pe7_A 261 ----SPDRFIYSADP---ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG--T 331 (388)
T ss_dssp ----CCCEEEEEECT---TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT--E
T ss_pred ----CCcceEEEEec---CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC--c
Confidence 11225999995 6777777755433 134468999999999876431 23368999999885 3
Q ss_pred cEEEeccCCccc--cC--CCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc
Q 002164 495 PRILFDRSSEDV--YS--DPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (958)
Q Consensus 495 ~~~~~~~~~~~~--~~--~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~ 563 (958)
...++....... .. ......++|||||++|+|.... ...++||++++..+.
T Consensus 332 ~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~------------------~g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 332 QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV------------------HGKPALYLATLPESV 386 (388)
T ss_dssp EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT------------------TSSCEEEEEECCGGG
T ss_pred eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC------------------CCceeEEEEECChhc
Confidence 444544332100 00 0001126799999999998731 124579999987543
No 16
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=4.2e-23 Score=252.38 Aligned_cols=348 Identities=16% Similarity=0.078 Sum_probs=219.4
Q ss_pred CceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCccc
Q 002164 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLN 192 (958)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~ 192 (958)
.++|||||++|+|.... . ...|.++.+++|+|++.+ ++.++|+..+ ..+.
T Consensus 66 ~~~~Spdg~~l~~~~~~----------------------~--~~~r~~~~~~~~~~d~~~----~~~~~l~~~~--~~~~ 115 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNY----------------------V--KQWRHSYTASYDIYDLNK----RQLITEERIP--NNTQ 115 (740)
T ss_dssp EEEECTTSSEEEEEEEE----------------------E--ECSSSCEEEEEEEEETTT----TEECCSSCCC--TTEE
T ss_pred ceEECCCCCEEEEEECC----------------------e--eeEEEccceEEEEEECCC----CcEEEcccCC--Ccce
Confidence 37899999999998863 0 111223336899999965 6666676433 4689
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc--c------------ccccceEEecCCeEE
Q 002164 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL--N------------AIFDNFVWVNNSTLL 258 (958)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~--~------------~~~~~~~wspDG~~l 258 (958)
.|+|||||++|||+. ..+||++++++|+.+++|..+.... + .....+.|||||+.|
T Consensus 116 ~~~~SPdG~~la~~~----------~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~l 185 (740)
T 4a5s_A 116 WVTWSPVGHKLAYVW----------NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFL 185 (740)
T ss_dssp EEEECSSTTCEEEEE----------TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEE
T ss_pred eeEECCCCCEEEEEE----------CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEE
Confidence 999999999999986 4589999999999999986543210 0 001248899999999
Q ss_pred EEEecCCCCCCCC-----CCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C---C---eee
Q 002164 259 VCTIPLLRGDPPK-----KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---G---TVK 326 (958)
Q Consensus 259 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~---g---~~~ 326 (958)
+|...+......- ......-+.... +..+..+. .....+|+++++ + | +.+
T Consensus 186 a~~~~d~~~v~~~~~~~~~~~~~~~~~~~~---------------~~yp~~G~---~~~~~~l~v~d~~~~~~~~~~~~~ 247 (740)
T 4a5s_A 186 AYAQFNDTEVPLIEYSFYSDESLQYPKTVR---------------VPYPKAGA---VNPTVKFFVVNTDSLSSVTNATSI 247 (740)
T ss_dssp EEEEEECTTCCEEEEEECCSTTCSSCEEEE---------------EECCBTTS---CCCEEEEEEEETTSCCSSSCCCEE
T ss_pred EEEEEcccCCceEEEEeecCCCCCCCccee---------------ecCCCCcC---cCCeeEEEEEECCCCCCCCcceEE
Confidence 9985443321000 000000000000 00111100 002347999999 7 7 566
Q ss_pred ecCC------C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCce-------EEEeccCCccccCcc
Q 002164 327 EIGP------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-------VRELCDLPLAEDIPI 392 (958)
Q Consensus 327 ~l~~------~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-------~~~l~~~~~~~~~p~ 392 (958)
.+.. . ..+..++|||||+.+++..++.. ....|++||+++++ .+++.... ...
T Consensus 248 ~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~---------~~~~i~~~d~~tg~~~~~~~~~~~l~~~~----~~~ 314 (740)
T 4a5s_A 248 QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ---------NYSVMDICDYDESSGRWNCLVARQHIEMS----TTG 314 (740)
T ss_dssp EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST---------TEEEEEEEEEETTTTEEEECGGGCEEEEC----SSS
T ss_pred EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC---------CEEEEEEEECCCCccccceeEEEEeeecc----CCc
Confidence 6754 2 45678999999998888776532 12379999998765 12221100 000
Q ss_pred cccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEE
Q 002164 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVY 472 (958)
Q Consensus 393 ~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~ 472 (958)
+.+. .....+.|||||+.|+++.... ++..+||++++ ++++.++|+...+.+..+. ++||+.|+|
T Consensus 315 ~v~~--~~~~~p~fspDG~~l~~~~s~~---------~G~~~l~~~~~---~~~~~~~lT~g~~~v~~~~-~~d~~~i~f 379 (740)
T 4a5s_A 315 WVGR--FRPSEPHFTLDGNSFYKIISNE---------EGYRHICYFQI---DKKDCTFITKGTWEVIGIE-ALTSDYLYY 379 (740)
T ss_dssp CSSS--SSCCCCEECTTSSEEEEEEECT---------TSCEEEEEEET---TCSSCEESCCSSSCEEEEE-EECSSEEEE
T ss_pred eEcc--CcCCCceEcCCCCEEEEEEEcC---------CCceEEEEEEC---CCCceEecccCCEEEEEEE-EEeCCEEEE
Confidence 0000 0134688999999998553322 33568999995 7888899998887776654 467999999
Q ss_pred EEec--c-ccceEEEEEcCCCCCCCcEEEecc---CCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCC
Q 002164 473 ESWY--K-TRRTRTWVISPGSKDVAPRILFDR---SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (958)
Q Consensus 473 ~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (958)
.++. + ....+||.++++++. ....++.. .....+ .++|||||+++++.....
T Consensus 380 ~~~~~~~~~~~~~ly~v~~~g~~-~~~~lt~~~~~~~~~~~------~~~~S~dg~~~~~~~s~~--------------- 437 (740)
T 4a5s_A 380 ISNEYKGMPGGRNLYKIQLIDYT-KVTCLSCELNPERCQYY------SVSFSKEAKYYQLRCSGP--------------- 437 (740)
T ss_dssp EESCGGGCTTCBEEEEEETTEEE-EEEESSTTTSTTTBCBE------EEEECTTSSEEEEEECSB---------------
T ss_pred EEecCCCCCceeEEEEEECCCCC-cceeeccccCCCCCceE------EEEECCCCCEEEEEeCCC---------------
Confidence 9876 2 345789999998741 11234321 111112 278999999988886321
Q ss_pred CCCCCCeEEEEECCCCceEEEecCC
Q 002164 547 PEGNIPFLDLFDINTGSKERIWESD 571 (958)
Q Consensus 547 ~~~~~~~L~~~dl~~g~~~~l~~~~ 571 (958)
..+.+++++.++++..+++...
T Consensus 438 ---~~p~~~l~~~~~~~~~~~l~~n 459 (740)
T 4a5s_A 438 ---GLPLYTLHSSVNDKGLRVLEDN 459 (740)
T ss_dssp ---SSCEEEEEETTTTEEEEEEECC
T ss_pred ---CCCEEEEEECCCCcEEEEeccC
Confidence 1457899999888777776543
No 17
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=1.4e-22 Score=257.42 Aligned_cols=390 Identities=14% Similarity=0.054 Sum_probs=247.4
Q ss_pred CCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCC
Q 002164 108 APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD 187 (958)
Q Consensus 108 ~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~ 187 (958)
...+..++||| ++|||.+.. +||+|++.+ +..++|+.++
T Consensus 14 ~~~~~~~~~S~--~~iaf~~~~----------------------------------~l~~~~~~g----g~~~~lt~~~- 52 (1045)
T 1k32_A 14 PNLLLNPDIHG--DRIIFVCCD----------------------------------DLWEHDLKS----GSTRKIVSNL- 52 (1045)
T ss_dssp CCCCEEEEEET--TEEEEEETT----------------------------------EEEEEETTT----CCEEEEECSS-
T ss_pred cceEeCcEEeC--CEEEEEECC----------------------------------cEEEEECCC----CcEEEeeeCC-
Confidence 33567889995 699999864 799999854 6778887633
Q ss_pred CCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccc-------cceEEecCCeEEEE
Q 002164 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIF-------DNFVWVNNSTLLVC 260 (958)
Q Consensus 188 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~-------~~~~wspDG~~l~~ 260 (958)
..+..++|||||++|||++... ..++..+||++++++|+.++|+..... + ..++|||||+ |+|
T Consensus 53 -~~v~~~~~SPDG~~la~~s~~~---~~~~~~~i~~~d~~~g~~~~lt~~~~~-----~~~~~~~~~~~~~SpDg~-ll~ 122 (1045)
T 1k32_A 53 -GVINNARFFPDGRKIAIRVMRG---SSLNTADLYFYNGENGEIKRITYFSGK-----STGRRMFTDVAGFDPDGN-LII 122 (1045)
T ss_dssp -SEEEEEEECTTSSEEEEEEEES---TTCCEEEEEEEETTTTEEEECCCCCEE-----EETTEECSEEEEECTTCC-EEE
T ss_pred -CcccCeEECCCCCEEEEEEeec---cCCCCCeEEEEECCCCCeEEcccCCCc-----ccccccccccccCCCCCE-EEE
Confidence 5789999999999999987531 113567999999999999999875542 4 6899999999 555
Q ss_pred EecCCC---C-C-----------CCCCCCCCC-------C----------------------Cceee-ecCCcccccchh
Q 002164 261 TIPLLR---G-D-----------PPKKPLVPL-------G----------------------PKMQS-NEKRDIIQVRTF 295 (958)
Q Consensus 261 ~~~~~~---~-~-----------~~~~~~~~~-------~----------------------~~~~~-~~~~~~~~~r~~ 295 (958)
+..... . . .......+. + ..++. ..++........
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 533210 0 0 000000000 0 00000 000000000000
Q ss_pred hhh---ccCchhhhHHH--HhhcceEEEEEc-CCeeeecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeE
Q 002164 296 QDL---LKDEYDEDLFD--YYATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVG 369 (958)
Q Consensus 296 ~d~---~~~~~~~~~~~--~~~~~~l~~~~~-~g~~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~ 369 (958)
... .....+.-.+. ..+..+||.++. ++..+.++....+..++|||||++|++.. .++|+
T Consensus 203 ~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~--------------~~~i~ 268 (1045)
T 1k32_A 203 STHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK--------------GGSIY 268 (1045)
T ss_dssp SSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE--------------TTEEE
T ss_pred CCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEe--------------CCEEE
Confidence 000 00000000000 013467999998 66777787664456779999999999985 23899
Q ss_pred EEeccCceEEEeccCCccccCcccccccccCcceeeee-cCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCc
Q 002164 370 VWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP 448 (958)
Q Consensus 370 l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~s-pDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~ 448 (958)
+|+++++....+..... ...+. .......+..+.|| |||+.|++. ..+.++++++ .++..
T Consensus 269 ~~d~~~~~l~~l~~~~~-~~~~~-~~~~~~~v~~~~~S~pdG~~la~~--------------~~~~i~~~~~---~~~~~ 329 (1045)
T 1k32_A 269 IFNPDTEKIEKIEIGDL-ESPED-RIISIPSKFAEDFSPLDGDLIAFV--------------SRGQAFIQDV---SGTYV 329 (1045)
T ss_dssp EECTTTCCEEECCCCCC-CBCCS-EEEECGGGGEEEEEECGGGCEEEE--------------ETTEEEEECT---TSSBE
T ss_pred EecCCceEeeeeccCcc-ccccc-ccccccccceeeecCCCCCEEEEE--------------EcCEEEEEcC---CCCce
Confidence 99996655544332110 00111 01112346789999 999999984 2457899985 55666
Q ss_pred eEEEeecc-ccCceeeecCCceEEEEEeccccceEEE-EEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEE
Q 002164 449 EILHKLDL-RYGGISWCDDSLALVYESWYKTRRTRTW-VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIA 526 (958)
Q Consensus 449 ~~l~~~~~-~~~~~~~spDg~~l~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 526 (958)
..+..... .+..+.|| ||+.|+|.+. ...|| ++++.++ +...+. .....+.. ++|||||++|++
T Consensus 330 ~~~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~--~~~~l~-~~~~~~~~------~~~SpDG~~la~ 395 (1045)
T 1k32_A 330 LKVPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRTG--KAEKFE-ENLGNVFA------MGVDRNGKFAVV 395 (1045)
T ss_dssp EECSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTTC--CEEECC-CCCCSEEE------EEECTTSSEEEE
T ss_pred EEccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCCC--CceEec-CCccceee------eEECCCCCEEEE
Confidence 66655555 67789999 9999999875 25799 8998874 333333 22222222 789999999998
Q ss_pred EeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecC-
Q 002164 527 KIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESK- 605 (958)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~- 605 (958)
... ...|++||+++|+.+.+...... ....++|||||+.+++.....
T Consensus 396 ~~~---------------------~~~v~~~d~~tg~~~~~~~~~~~-----------~v~~~~~SpDG~~la~~~~~~~ 443 (1045)
T 1k32_A 396 AND---------------------RFEIMTVDLETGKPTVIERSREA-----------MITDFTISDNSRFIAYGFPLKH 443 (1045)
T ss_dssp EET---------------------TSEEEEEETTTCCEEEEEECSSS-----------CCCCEEECTTSCEEEEEEEECS
T ss_pred ECC---------------------CCeEEEEECCCCceEEeccCCCC-----------CccceEECCCCCeEEEEecCcc
Confidence 762 12699999999998888743321 112367999999998877654
Q ss_pred -----CCCceEEEEECCCCCeeEeecC
Q 002164 606 -----TENTQYYIQSWPDKKSCQITDF 627 (958)
Q Consensus 606 -----~~p~~~~~~d~~~g~~~~Lt~~ 627 (958)
..+..++++++.+++.+.++..
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~~~~l~~~ 470 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRKIFAATTE 470 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTEEEECSCS
T ss_pred ccccCCCCCeEEEEECCCCcEEEeeCC
Confidence 3456899999998887777654
No 18
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=3.5e-22 Score=244.34 Aligned_cols=335 Identities=12% Similarity=0.074 Sum_probs=202.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCC-
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG- 188 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~- 188 (958)
.+..++|||||++|||...+ ... .+......|++|++.+ +..++++.....
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~----------------------~~~--~~~~~~~~i~~~d~~~----~~~~~l~~~~~~~ 113 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNV----------------------EPI--YQHSYTGYYVLSKIPH----GDPQSLDPPEVSN 113 (723)
T ss_dssp TCSEEEECTTSSEEEEEESC----------------------CCC--SSSCCCSEEEEEESSS----CCCEECCCTTCCS
T ss_pred ccceEEECCCCCEEEEEecC----------------------ccc--eeecceeeEEEEECCC----CceEeccCCcccc
Confidence 36789999999999999764 100 0111124799999965 444566533221
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc--c------------ccccceEEecC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL--N------------AIFDNFVWVNN 254 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~--~------------~~~~~~~wspD 254 (958)
..+..++|||||++|||++ ..+||++++++|+.++++..+.... + ..+..++||||
T Consensus 114 ~~~~~~~~SPdG~~la~~~----------~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD 183 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIF----------ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD 183 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEE----------TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT
T ss_pred ccccccEECCCCCEEEEEE----------CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCC
Confidence 1478899999999999986 2489999999999988876543210 0 00247999999
Q ss_pred CeEEEEEecCCCCCCC---CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecC
Q 002164 255 STLLVCTIPLLRGDPP---KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIG 329 (958)
Q Consensus 255 G~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~ 329 (958)
|+.|++...+...... ........+.+. .+....++.. ....+|+++++ +++ .+.+.
T Consensus 184 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~G~~---~~~~~l~~~d~~~~~~~~~l~ 245 (723)
T 1xfd_A 184 GTRLAYAAINDSRVPIMELPTYTGSIYPTVK---------------PYHYPKAGSE---NPSISLHVIGLNGPTHDLEMM 245 (723)
T ss_dssp SSEEEEEEEECTTSCEEEECCCSSSSSCCCE---------------EEECCBTTSC---CCEEEEEEEESSSSCCCEECC
T ss_pred CCEEEEEEECCCccceEEeeccCCcCCCcce---------------eccCCCCCCC---CCeeEEEEEECCCCceeEEee
Confidence 9999998544321100 000000000000 0001111100 02357999999 776 36665
Q ss_pred CC-------ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcc
Q 002164 330 PP-------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMR 402 (958)
Q Consensus 330 ~~-------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~ 402 (958)
.+ ..+..++|||||++|++..++.. ....|++||+++++.+.+........ .. ....
T Consensus 246 ~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---------~~~~i~~~d~~~g~~~~~~~~~~~~~----~~---~~~~ 309 (723)
T 1xfd_A 246 PPDDPRMREYYITMVKWATSTKVAVTWLNRAQ---------NVSILTLCDATTGVCTKKHEDESEAW----LH---RQNE 309 (723)
T ss_dssp CCCCGGGSSEEEEEEEESSSSEEEEEEEETTS---------CEEEEEEEETTTCCEEEEEEEECSSC----CC---CCCC
T ss_pred CCccCCCccceeEEEEEeCCCeEEEEEEcCCC---------CeEEEEEEeCCCCcceEEEEeccCCE----Ee---ccCC
Confidence 42 34567999999998877765421 23479999999777665542110000 00 0013
Q ss_pred eeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC---ceEEEeeccccCc-eeeecCCceEEEEEeccc
Q 002164 403 SINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEILHKLDLRYGG-ISWCDDSLALVYESWYKT 478 (958)
Q Consensus 403 ~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~---~~~l~~~~~~~~~-~~~spDg~~l~~~~~~~~ 478 (958)
.+.|||||+.|++.....++.. .....||+++. .+++. .+.++.....+.. +.|||||+.|+|.+..+.
T Consensus 310 ~~~~spdg~~l~~~~~~~~~~~-----~~~~~l~~~d~--~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~ 382 (723)
T 1xfd_A 310 EPVFSKDGRKFFFIRAIPQGGR-----GKFYHITVSSS--QPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDL 382 (723)
T ss_dssp CCEECTTSCSEEEEEEECCSSS-----SCEEEEEEECS--SCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSC
T ss_pred CceEcCCCCeEEEEEecccCCC-----cceeEEEEEec--cCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCC
Confidence 6899999999998633322210 11346888882 25555 6677655555544 689999999999876641
Q ss_pred -cceEEEEEcCCCCCCCcEEEecc--CCccccCCCCCCceEeccCCceEEEEeee
Q 002164 479 -RRTRTWVISPGSKDVAPRILFDR--SSEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (958)
Q Consensus 479 -~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~spdG~~l~~~~~~ 530 (958)
...+||.++++++ .....++.. ....+.. ++|||||++|++....
T Consensus 383 ~~~~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~------~~~spdg~~l~~~~~~ 430 (723)
T 1xfd_A 383 PRRRQLYSANTVGN-FNRQCLSCDLVENCTYFS------ASFSHSMDFFLLKCEG 430 (723)
T ss_dssp TTCCEEEEECSSTT-CCCBCSSTTSSSSCCCCE------EEECTTSSEEEEECCS
T ss_pred CcceEEEEEeCCCC-CCcceecccccCCCCeEE------EEECCCCCEEEEEccC
Confidence 3478999998764 122333321 1111222 7899999999988743
No 19
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=1.9e-22 Score=210.27 Aligned_cols=221 Identities=19% Similarity=0.207 Sum_probs=165.8
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
+..+.++++. +|..+.++++.|++. .++.|+||++||... ........+..|+++||.|+
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~p~~~----~~~~p~vv~~HG~~g---------------~~~~~~~~~~~l~~~G~~v~ 63 (241)
T 3f67_A 4 IIAGETSIPS-QGENMPAYHARPKNA----DGPLPIVIVVQEIFG---------------VHEHIRDLCRRLAQEGYLAI 63 (241)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEETTC----CSCEEEEEEECCTTC---------------SCHHHHHHHHHHHHTTCEEE
T ss_pred ceeeeEEEec-CCcceEEEEecCCCC----CCCCCEEEEEcCcCc---------------cCHHHHHHHHHHHHCCcEEE
Confidence 4567888988 899999999999752 235899999999421 11112345667889999999
Q ss_pred EcCCCCCCCCCCcccc----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 002164 717 GGPTTPIIGEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~----------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a 786 (958)
++++++..|....... ........+|+.++++++.+++ +|+++|+++|||+||.+++.++.+.|+ +++
T Consensus 64 ~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~ 141 (241)
T 3f67_A 64 APELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKA 141 (241)
T ss_dssp EECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCE
T ss_pred EecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cce
Confidence 9666543222111110 1123467899999999999987 888999999999999999999999977 777
Q ss_pred EEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEE
Q 002164 787 GIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCR 866 (958)
Q Consensus 787 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 866 (958)
+|+..+....... .+...+|...+.++++|+|++||++|..+| +.++.++++.++..+.+++
T Consensus 142 ~v~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~ 203 (241)
T 3f67_A 142 AVAWYGKLVGEKS----------------LNSPKHPVDIAVDLNAPVLGLYGAKDASIP--QDTVETMRQALRAANATAE 203 (241)
T ss_dssp EEEESCCCSCCCC----------------SSSCCCHHHHGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHHHTTCSEE
T ss_pred EEEEeccccCCCc----------------cCCccCHHHhhhhcCCCEEEEEecCCCCCC--HHHHHHHHHHHHHcCCCcE
Confidence 7776664321110 112245556667789999999999999999 9999999999999999999
Q ss_pred EEEeCCCCccCCC-------cccHHHHHHHHHHHHHHh
Q 002164 867 LVILPFESHGYAA-------RESIMHVLWETDRWLQKY 897 (958)
Q Consensus 867 ~~~~p~~~H~~~~-------~~~~~~~~~~i~~fl~~~ 897 (958)
++++|+++|.+.. .+.....++.+.+||++|
T Consensus 204 ~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 204 IVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp EEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 9999999999852 334466778889998764
No 20
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.89 E-value=3.7e-22 Score=210.29 Aligned_cols=230 Identities=13% Similarity=0.081 Sum_probs=149.4
Q ss_pred CCCCeeEeecCCCCCCCCCCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCC
Q 002164 617 PDKKSCQITDFPHPYPQLASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNE 696 (958)
Q Consensus 617 ~~g~~~~Lt~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~ 696 (958)
..|..+..+..+......-.++.+.+++. .||.+|++++|+|++ ..+.|+||++||++.. .
T Consensus 9 ~~~~~r~~~~~~~~~~~~~~~~e~~~~~~-~dG~~i~g~l~~P~~-----~~~~p~Vl~~HG~g~~-------------~ 69 (259)
T 4ao6_A 9 HHGSMRHQMSWNGKDERKLSVQERGFSLE-VDGRTVPGVYWSPAE-----GSSDRLVLLGHGGTTH-------------K 69 (259)
T ss_dssp --------CEECSCCEEETTEEEEEEEEE-ETTEEEEEEEEEESS-----SCCSEEEEEEC-------------------
T ss_pred ccCcceeeeccCCCccccCCceEEEEEEe-eCCeEEEEEEEeCCC-----CCCCCEEEEeCCCccc-------------c
Confidence 34544444444322222222333445554 599999999999976 2358999999997521 1
Q ss_pred CCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc---------------------hhhHHHHHHHHHHHHHHHHHcCC
Q 002164 697 FPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN---------------------DRFVEQLVACAEAAVEEVVRRGV 755 (958)
Q Consensus 697 ~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~---------------------~~~~~~~~~D~~~av~~l~~~~~ 755 (958)
........++.|+++||+|+.+|++ |+|.+... .......+.|..++++++...
T Consensus 70 ~~~~~~~~a~~la~~Gy~Vl~~D~r---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~-- 144 (259)
T 4ao6_A 70 KVEYIEQVAKLLVGRGISAMAIDGP---GHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE-- 144 (259)
T ss_dssp --CHHHHHHHHHHHTTEEEEEECCC---C-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--
T ss_pred cchHHHHHHHHHHHCCCeEEeeccC---CCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--
Confidence 1112234577899999999995554 55543211 011234467888999998765
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEE
Q 002164 756 AHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILL 835 (958)
Q Consensus 756 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Li 835 (958)
+|+++|+++|+|+||++++.+++..| +++++|...+..... ...++...+.++++|+|+
T Consensus 145 ~d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~~~~~--------------------~~~~~~~~a~~i~~P~Li 203 (259)
T 4ao6_A 145 EGPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMGVEGV--------------------NGEDLVRLAPQVTCPVRY 203 (259)
T ss_dssp HCCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCCTTST--------------------THHHHHHHGGGCCSCEEE
T ss_pred cCCceEEEEeechhHHHHHHHHhcCC-ceEEEEEeccccccc--------------------cccchhhhhccCCCCEEE
Confidence 68899999999999999999999996 477766654422100 011344556788999999
Q ss_pred EeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 836 VHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 836 i~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
+||++|.+|| ++++.++|+++.. ..++++++|+ +|... ...+..+.+++||++||+
T Consensus 204 ~hG~~D~~vp--~~~~~~l~~al~~--~~k~l~~~~G-~H~~~---p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 204 LLQWDDELVS--LQSGLELFGKLGT--KQKTLHVNPG-KHSAV---PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEESS-CTTCC---CHHHHTHHHHHHHHHHCC
T ss_pred EecCCCCCCC--HHHHHHHHHHhCC--CCeEEEEeCC-CCCCc---CHHHHHHHHHHHHHHhcC
Confidence 9999999999 9999999999854 4578899998 55432 234667889999999985
No 21
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.89 E-value=6.2e-22 Score=222.16 Aligned_cols=231 Identities=19% Similarity=0.154 Sum_probs=174.5
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
...+.++++. ||.+|++++++|++. ++.|+||++||+.... .. .......|+++||+|+
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~-----~~~P~vl~~hG~~~~~-----------~~----~~~~~~~l~~~G~~v~ 183 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP-----GPHPAVIMLGGLESTK-----------EE----SFQMENLVLDRGMATA 183 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS-----CCEEEEEEECCSSCCT-----------TT----THHHHHHHHHTTCEEE
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC-----CCCCEEEEeCCCCccH-----------HH----HHHHHHHHHhCCCEEE
Confidence 5678889988 899999999999862 3589999999863110 11 1233667899999999
Q ss_pred EcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC
Q 002164 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (958)
.+++ +|+|.+............++.+++++|.+++.+|+++|+|+|+|+||++++.++.+ |++|+++|+. |+++.
T Consensus 184 ~~d~---rG~G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~ 258 (386)
T 2jbw_A 184 TFDG---PGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSD 258 (386)
T ss_dssp EECC---TTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSC
T ss_pred EECC---CCCCCCCCCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCCh
Confidence 9554 56666522212223345668899999999988899999999999999999999999 7899999999 88775
Q ss_pred CCCCCCccc----------ccchhhhcH-HHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHH-HhCCCc
Q 002164 797 TLTPFGFQN----------EDRTLWEAT-STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNAL-KGHGAL 864 (958)
Q Consensus 797 ~~~~~~~~~----------~~~~~~~~~-~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l-~~~g~~ 864 (958)
......+.. ....++... ..+...++...+.++++|+|++||++|. |+ +.++.++++++ +. +
T Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~--~~~~~~l~~~l~~~---~ 332 (386)
T 2jbw_A 259 LDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VP--LSFVDTVLELVPAE---H 332 (386)
T ss_dssp STTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SC--THHHHHHHHHSCGG---G
T ss_pred HHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CC--HHHHHHHHHHhcCC---C
Confidence 322110000 001122222 4456778888889999999999999999 98 99999999988 64 5
Q ss_pred EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhccC
Q 002164 865 CRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 865 ~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
++++++++++|.+ .++...+.+.+.+||.+++...
T Consensus 333 ~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 333 LNLVVEKDGDHCC--HNLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp EEEEEETTCCGGG--GGGTTHHHHHHHHHHHHHHTSS
T ss_pred cEEEEeCCCCcCC--ccchHHHHHHHHHHHHHhcCCc
Confidence 8999999999976 4556788999999999999754
No 22
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.89 E-value=4.8e-22 Score=212.05 Aligned_cols=238 Identities=14% Similarity=0.121 Sum_probs=172.1
Q ss_pred EEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCC
Q 002164 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (958)
Q Consensus 642 ~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~ 721 (958)
.++...+|..+.+++..|....+ .++.|+||++||+++..+. .......+..|+++||.|+++++
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~--~~~~p~vv~~HGgg~~~~~------------~~~~~~~~~~l~~~G~~v~~~d~- 81 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNE--NYTFPAIIICPGGGYQHIS------------QRESDPLALAFLAQGYQVLLLNY- 81 (276)
T ss_dssp EECCCBTTBEEEEECCCC--------CCBCEEEEECCSTTTSCC------------GGGSHHHHHHHHHTTCEEEEEEC-
T ss_pred ccccCCCCeEEEEEEeCCccccc--CCCCCEEEEEcCCccccCC------------chhhHHHHHHHHHCCCEEEEecC-
Confidence 35666788888776665543211 2458999999997533211 11123456788999999999555
Q ss_pred CCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEeccCCCCC
Q 002164 722 PIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRT 797 (958)
Q Consensus 722 ~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~~~~ 797 (958)
+|+|.+... ..+...+.|+.++++++.++. .+|+++|+|+|||+||.+++.++.+ .+++++++|+.+|+.+..
T Consensus 82 --~g~g~s~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~ 158 (276)
T 3hxk_A 82 --TVMNKGTNY-NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFT 158 (276)
T ss_dssp --CCTTSCCCS-CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTT
T ss_pred --ccCCCcCCC-CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHH
Confidence 455554322 234578899999999999864 3788999999999999999999998 678999999999987633
Q ss_pred CCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 002164 798 LTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY 877 (958)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~ 877 (958)
.. +........+. ..+. ...++...+.++++|+|++||++|..+| +.++.+++++++..+.+++++++|+++|.+
T Consensus 159 ~~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 233 (276)
T 3hxk_A 159 FG-WPSDLSHFNFE-IENI-SEYNISEKVTSSTPPTFIWHTADDEGVP--IYNSLKYCDRLSKHQVPFEAHFFESGPHGV 233 (276)
T ss_dssp SS-CSSSSSSSCCC-CSCC-GGGBTTTTCCTTSCCEEEEEETTCSSSC--THHHHHHHHHHHTTTCCEEEEEESCCCTTC
T ss_pred hh-CCcchhhhhcC-chhh-hhCChhhccccCCCCEEEEecCCCceeC--hHHHHHHHHHHHHcCCCeEEEEECCCCCCc
Confidence 22 11110000111 0111 4567777888889999999999999999 999999999999999999999999999987
Q ss_pred CCc------------ccHHHHHHHHHHHHHHhhccCC
Q 002164 878 AAR------------ESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 878 ~~~------------~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
... +....+.+.+.+||+++.+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~ 270 (276)
T 3hxk_A 234 SLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNLE 270 (276)
T ss_dssp TTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTTC
T ss_pred cccCccccccccccCchHHHHHHHHHHHHHhCccccc
Confidence 532 2346788899999999876543
No 23
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=6.2e-21 Score=233.96 Aligned_cols=331 Identities=13% Similarity=0.146 Sum_probs=211.9
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcc------------------cc--ccccce
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY------------------LN--AIFDNF 249 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~------------------~~--~~~~~~ 249 (958)
.+..++|||||++|+|....+ .+.....||++++++|+.++++...... .. ..+..+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d---~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKD---SDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCS---SCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCceEecCCCEEEEEeccC---CCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 578899999999999987311 1222468999999999988877543210 00 125689
Q ss_pred EEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC---ee
Q 002164 250 VWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TV 325 (958)
Q Consensus 250 ~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g---~~ 325 (958)
+|||||+.|++. ...+||++++ +| +.
T Consensus 115 ~~SpDg~~l~~~--------------------------------------------------~~~~i~~~d~~~~~~~~~ 144 (741)
T 2ecf_A 115 QWSPDAQRLLFP--------------------------------------------------LGGELYLYDLKQEGKAAV 144 (741)
T ss_dssp EECTTSSEEEEE--------------------------------------------------ETTEEEEEESSSCSTTSC
T ss_pred EECCCCCEEEEE--------------------------------------------------eCCcEEEEECCCCCcceE
Confidence 999999999988 1246999999 77 77
Q ss_pred eecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccc---cCcccccc-cccC
Q 002164 326 KEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE---DIPIAFNS-VRKG 400 (958)
Q Consensus 326 ~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~---~~p~~~~~-~~~~ 400 (958)
+.++.. ..+..++|||||++|+|.+.. +|++||+++++.++++...... ..+.+... ....
T Consensus 145 ~~l~~~~~~~~~~~~SPDG~~la~~~~~--------------~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 210 (741)
T 2ecf_A 145 RQLTHGEGFATDAKLSPKGGFVSFIRGR--------------NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDR 210 (741)
T ss_dssp CBCCCSSSCEEEEEECTTSSEEEEEETT--------------EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCC
T ss_pred EEcccCCcccccccCCCCCCEEEEEeCC--------------cEEEEecCCCCEEEeccCCccceeccccceeeeecccc
Confidence 778766 667899999999999999732 8999999988887776533210 00000000 0012
Q ss_pred cceeeeecCCCCceEEEEeccCCCc----------------c----cccccCCeEEEEeCCCCCC-CCceEEEe---ecc
Q 002164 401 MRSINWRSDKPSTLYWAETQDGGDA----------------K----VEVTPRDIIYTQQAEPVQG-EGPEILHK---LDL 456 (958)
Q Consensus 401 ~~~~~~spDG~~l~~~~~~~~~~~~----------------~----~~~~~~~~l~~~~~~~~~g-~~~~~l~~---~~~ 456 (958)
...+.|||||+.|++.......... . ........|+++++ ++ ++.+.+.. ...
T Consensus 211 ~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~~~ 287 (741)
T 2ecf_A 211 HTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---AEQAQTQWIDLGKEQDI 287 (741)
T ss_dssp CCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS---STTCCCEEECCCSCSSE
T ss_pred ccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC---CCCCceEEecCCCCcce
Confidence 4679999999999996432110000 0 00011226889985 66 66666642 334
Q ss_pred ccCceeeecCCceEEEEEe-ccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCC
Q 002164 457 RYGGISWCDDSLALVYESW-YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEG 535 (958)
Q Consensus 457 ~~~~~~~spDg~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~ 535 (958)
.+..++| |||++|++... .......||++++.++ +...+.......... ....+.|||||+ +++....
T Consensus 288 ~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~--~~~~~~~spdg~-~~~~~~~----- 356 (741)
T 2ecf_A 288 YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSPTWVP--LHNSLRFLDDGS-ILWSSER----- 356 (741)
T ss_dssp EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECSSCCC--CCSCCEECTTSC-EEEEECT-----
T ss_pred EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCCCcCC--cCCceEECCCCe-EEEEecC-----
Confidence 5677999 99999999875 3334578999999885 334443322211000 001177999999 4444321
Q ss_pred cEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCC-CceEEEE
Q 002164 536 TYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTE-NTQYYIQ 614 (958)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~-p~~~~~~ 614 (958)
....+||.+|++++ .+.|+..... +... ..||+||+.+++....... ...+|.+
T Consensus 357 -------------~g~~~l~~~~~~~~-~~~l~~~~~~-----v~~~------~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 357 -------------TGFQHLYRIDSKGK-AAALTHGNWS-----VDEL------LAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp -------------TSSCEEEEECSSSC-EEESCCSSSC-----EEEE------EEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred -------------CCccEEEEEcCCCC-eeeeeecceE-----EEeE------eEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 11247999998766 7777665432 1111 2589999988887764322 3467888
Q ss_pred ECCCCCeeEeec
Q 002164 615 SWPDKKSCQITD 626 (958)
Q Consensus 615 d~~~g~~~~Lt~ 626 (958)
+..++..++|+.
T Consensus 412 ~~~g~~~~~l~~ 423 (741)
T 2ecf_A 412 PLQGGQPQRLSK 423 (741)
T ss_dssp ETTCCCCEECCC
T ss_pred EcCCCCeeeccc
Confidence 766666677764
No 24
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=4.6e-21 Score=215.86 Aligned_cols=324 Identities=13% Similarity=0.091 Sum_probs=202.8
Q ss_pred CCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCc
Q 002164 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (958)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~ 190 (958)
...++|||||++|+|+... .+ . ..||++++.+ +..++++.. ...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~----------------------~g--~------~~l~~~d~~~----~~~~~l~~~--~~~ 81 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF----------------------DG--N------RNYYLLNLET----QQAVQLTEG--KGD 81 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT----------------------TS--S------CEEEEEETTT----TEEEECCCS--SCB
T ss_pred eecCcCCCCCCEEEEEEec----------------------CC--C------ceEEEEECCC----CcEEEeecC--CCC
Confidence 5688999999999999863 11 1 3689999854 566666532 223
Q ss_pred -ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 191 -LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 191 -~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
...+.|||||++|+|+.. ..+||++++++++.++++..+. . |+|+|+.|++........
T Consensus 82 ~~~~~~~spdg~~l~~~~~---------~~~l~~~d~~~~~~~~~~~~~~--------~--~~~~g~~l~~~~~~~~~~- 141 (396)
T 3c5m_A 82 NTFGGFISTDERAFFYVKN---------ELNLMKVDLETLEEQVIYTVDE--------E--WKGYGTWVANSDCTKLVG- 141 (396)
T ss_dssp CTTTCEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECCT--------T--EEEEEEEEECTTSSEEEE-
T ss_pred ccccceECCCCCEEEEEEc---------CCcEEEEECCCCCcEEEEeccc--------c--cCCCCCEEEeccCCcccc-
Confidence 334899999999999863 2379999999999888865433 1 899999998752110000
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHH------hhcceEEEEEc-CCeeeecCCC-ccccccccCC
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDY------YATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSP 341 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~------~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~Sp 341 (958)
+... ......++..+.+ ....+||++++ +|+.+.+... ..+..+.|||
T Consensus 142 -----------~~~~-------------~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp 197 (396)
T 3c5m_A 142 -----------IEIL-------------KRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRP 197 (396)
T ss_dssp -----------EEEE-------------GGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred -----------cccc-------------ccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECC
Confidence 0000 0000011111110 14568999999 8887777654 5677899999
Q ss_pred -CCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEec
Q 002164 342 -DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (958)
Q Consensus 342 -DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~ 420 (958)
||++|+|.+.... ......|++++++++..+.+...... ..+..+.|||||+.|++.....
T Consensus 198 ~dg~~l~~~~~~~~-------~~~~~~l~~~d~~~~~~~~l~~~~~~-----------~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 198 FDDSTVGFCHEGPH-------DLVDARMWLVNEDGSNVRKIKEHAEG-----------ESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp TEEEEEEEEECSCS-------SSCSCCCEEEETTSCCCEESSCCCTT-----------EEEEEEEECTTSSCEEEEEEET
T ss_pred CCCCEEEEEecCCC-------CCCCceEEEEECCCCceeEeeccCCC-----------ccccceEECCCCCEEEEEecCC
Confidence 8999999874211 01124799999988776666542100 1235689999999999864331
Q ss_pred cCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeec-CCceEEEEEec------------cccceEEEEEc
Q 002164 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCD-DSLALVYESWY------------KTRRTRTWVIS 487 (958)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~sp-Dg~~l~~~~~~------------~~~~~~l~~~~ 487 (958)
. .....|+++++ .+++.+.+...... . +.||| ||+.|++.... ......||+++
T Consensus 260 ~--------~~~~~l~~~d~---~~g~~~~l~~~~~~-~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d 326 (396)
T 3c5m_A 260 G--------QTDRVIYKANP---ETLENEEVMVMPPC-S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326 (396)
T ss_dssp T--------TCCEEEEEECT---TTCCEEEEEECCSE-E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEE
T ss_pred C--------CccceEEEEEC---CCCCeEEeeeCCCC-C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEe
Confidence 1 11234999995 66676666544332 2 89999 99988875421 11236799999
Q ss_pred CCCCCCCcEEEeccCCcc------ccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCC
Q 002164 488 PGSKDVAPRILFDRSSED------VYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (958)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~ 561 (958)
+.++ +...+....... .+. ....++|||||++|+|.... .....||++|+++
T Consensus 327 ~~~~--~~~~l~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~s~~------------------~~~~~l~~~~~~~ 384 (396)
T 3c5m_A 327 TKAK--SAQKLCKHSTSWDVLDGDRQI--THPHPSFTPNDDGVLFTSDF------------------EGVPAIYIADVPE 384 (396)
T ss_dssp TTTT--BCCEEEECCCCCCCBTTBSST--TCCCCEECTTSSEEEEEECT------------------TSSCEEEEEECCT
T ss_pred cccC--ceEEccCCCCccccccccccC--CCCCceEccCCCeEEEEecC------------------CCCceEEEEEEcc
Confidence 9875 333444332210 000 01126799999999988731 1235799999988
Q ss_pred CceEEE
Q 002164 562 GSKERI 567 (958)
Q Consensus 562 g~~~~l 567 (958)
++.+.+
T Consensus 385 ~~~~~~ 390 (396)
T 3c5m_A 385 SYKHLE 390 (396)
T ss_dssp TCC---
T ss_pred cccccc
Confidence 766544
No 25
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=2.9e-21 Score=217.49 Aligned_cols=327 Identities=12% Similarity=0.087 Sum_probs=202.3
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (958)
+..++|||||++|+|+.. .++...||++++++++.++++...... ...+.|||||+.|+|..
T Consensus 38 ~~~~~~SpdG~~l~~~~~------~~g~~~l~~~d~~~~~~~~l~~~~~~~----~~~~~~spdg~~l~~~~-------- 99 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGD------FDGNRNYYLLNLETQQAVQLTEGKGDN----TFGGFISTDERAFFYVK-------- 99 (396)
T ss_dssp TTSCCBCTTSCEEEEEEC------TTSSCEEEEEETTTTEEEECCCSSCBC----TTTCEECTTSSEEEEEE--------
T ss_pred eecCcCCCCCCEEEEEEe------cCCCceEEEEECCCCcEEEeecCCCCc----cccceECCCCCEEEEEE--------
Confidence 678999999999999874 345678999999999999987655431 23489999999999872
Q ss_pred CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-cc-ccc-----------
Q 002164 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AV-YTS----------- 336 (958)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~-~~~----------- 336 (958)
...+||++++ +|+.+.+... .. ...
T Consensus 100 -----------------------------------------~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 138 (396)
T 3c5m_A 100 -----------------------------------------NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTK 138 (396)
T ss_dssp -----------------------------------------TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred -----------------------------------------cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCc
Confidence 1135899998 7776666542 11 111
Q ss_pred --------cccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeec
Q 002164 337 --------LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS 408 (958)
Q Consensus 337 --------~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp 408 (958)
+.|||||+++++.... .......|++||+++++.+.+.... .....+.|+|
T Consensus 139 ~~~~~~~~~~~spdg~~~~~~~~~--------~~~~~~~l~~~d~~~g~~~~~~~~~-------------~~~~~~~~sp 197 (396)
T 3c5m_A 139 LVGIEILKRDWQPLTSWEKFAEFY--------HTNPTCRLIKVDIETGELEVIHQDT-------------AWLGHPIYRP 197 (396)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHH--------HTCCCEEEEEEETTTCCEEEEEEES-------------SCEEEEEEET
T ss_pred cccccccccccCCCCcceeeeeec--------cCCCcceEEEEECCCCcEEeeccCC-------------cccccceECC
Confidence 3455555555443210 0012348999999988777665321 2345789999
Q ss_pred -CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee--ccccCceeeecCCceEEEEEecccc-ceEEE
Q 002164 409 -DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRYGGISWCDDSLALVYESWYKTR-RTRTW 484 (958)
Q Consensus 409 -DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~~~~~~~spDg~~l~~~~~~~~~-~~~l~ 484 (958)
||+.|+|..+ +... .....||++++ ++++.+.+... ...+..+.|||||++|+|.....+. ...||
T Consensus 198 ~dg~~l~~~~~---~~~~----~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 198 FDDSTVGFCHE---GPHD----LVDARMWLVNE---DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp TEEEEEEEEEC---SCSS----SCSCCCEEEET---TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEec---CCCC----CCCceEEEEEC---CCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 8998888642 1000 11247899995 66676776543 2345678999999999998765432 24599
Q ss_pred EEcCCCCCCCcEEEeccCCccccCCCCCCceEecc-CCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc
Q 002164 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (958)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~ 563 (958)
++++.++ +...+...... . +.||| ||+.+++.... .+ +.....+.........|++||+++++
T Consensus 268 ~~d~~~g--~~~~l~~~~~~-------~--~~~s~~dg~~l~~~~~~--~p---~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 268 KANPETL--ENEEVMVMPPC-------S--HLMSNFDGSLMVGDGCD--AP---VDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp EECTTTC--CEEEEEECCSE-------E--EEEECSSSSEEEEEECC--C-------------CCCCCCEEEEEETTTTB
T ss_pred EEECCCC--CeEEeeeCCCC-------C--CCccCCCCceEEEecCC--cc---eeeccccccccCCCCcEEEEecccCc
Confidence 9999875 33444322211 1 56999 99987765411 00 00000000001123579999999998
Q ss_pred eEEEecCCccc-ccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeec
Q 002164 564 KERIWESDKEK-YYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITD 626 (958)
Q Consensus 564 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~ 626 (958)
.++|+...... .+.. ........++|+|||+.+++..... ...++|++++.+++.+.+..
T Consensus 332 ~~~l~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~~~~~~~ 392 (396)
T 3c5m_A 332 AQKLCKHSTSWDVLDG--DRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESYKHLEHH 392 (396)
T ss_dssp CCEEEECCCCCCCBTT--BSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTCC-----
T ss_pred eEEccCCCCccccccc--cccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEcccccccccc
Confidence 88887644210 0000 0000112367999999998887654 45679999998887766543
No 26
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=6.9e-21 Score=215.61 Aligned_cols=249 Identities=14% Similarity=0.113 Sum_probs=181.9
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~ 242 (958)
..|++|++. | +..+.++... ..+..++|||||++|+|+.. .++...|+++|+++|+.++++.....
T Consensus 159 ~~i~i~d~~--g--~~~~~l~~~~--~~v~~~~~Spdg~~la~~s~------~~~~~~i~~~d~~tg~~~~l~~~~~~-- 224 (415)
T 2hqs_A 159 YELRVSDYD--G--YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTF------ESGRSALVIQTLANGAVRQVASFPRH-- 224 (415)
T ss_dssp EEEEEEETT--S--CSCEEEEEES--SCEEEEEECTTSSEEEEEEC------TTSSCEEEEEETTTCCEEEEECCSSC--
T ss_pred ceEEEEcCC--C--CCCEEEeCCC--CcceeeEEcCCCCEEEEEEe------cCCCcEEEEEECCCCcEEEeecCCCc--
Confidence 379999984 3 5566776532 46899999999999999873 33457999999999998888765442
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-
Q 002164 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (958)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~- 321 (958)
+..++|||||+.|+++... + +..+||++++
T Consensus 225 ---~~~~~~spdg~~la~~~~~---------------------------------------~-------g~~~i~~~d~~ 255 (415)
T 2hqs_A 225 ---NGAPAFSPDGSKLAFALSK---------------------------------------T-------GSLNLYVMDLA 255 (415)
T ss_dssp ---EEEEEECTTSSEEEEEECT---------------------------------------T-------SSCEEEEEETT
T ss_pred ---ccCEEEcCCCCEEEEEEec---------------------------------------C-------CCceEEEEECC
Confidence 6789999999999977210 0 3356999999
Q ss_pred CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccC
Q 002164 322 DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (958)
Q Consensus 322 ~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (958)
+|+.+.++.. ..+..++|||||++|++.+.... ..+|++||+++++.+.++... ..
T Consensus 256 ~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g----------~~~i~~~d~~~~~~~~l~~~~-------------~~ 312 (415)
T 2hqs_A 256 SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEG-------------SQ 312 (415)
T ss_dssp TCCEEECCCCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSS-------------SE
T ss_pred CCCEEeCcCCCCcccceEECCCCCEEEEEECCCC----------CcEEEEEECCCCCEEEEecCC-------------Cc
Confidence 8888888776 66789999999999999985321 237999999987766665422 22
Q ss_pred cceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccc
Q 002164 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (958)
Q Consensus 401 ~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (958)
...+.|||||+.|++.... .....|+++++ ++++.+.++... .+..++|+|||+.|++.+..++ .
T Consensus 313 ~~~~~~spdG~~l~~~~~~----------~g~~~i~~~d~---~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~-~ 377 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSN----------GGQQHIAKQDL---ATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGM-G 377 (415)
T ss_dssp EEEEEECTTSSEEEEEEEC----------SSCEEEEEEET---TTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETT-E
T ss_pred ccCeEECCCCCEEEEEECc----------CCceEEEEEEC---CCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCC-c
Confidence 3578999999999885321 12357999996 666766665543 6778999999999999887654 3
Q ss_pred eEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCC
Q 002164 481 TRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTG 521 (958)
Q Consensus 481 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG 521 (958)
..||+++++++ ....+. .....+.+ ++|||--
T Consensus 378 ~~l~~~d~~g~--~~~~l~-~~~~~v~~------~~~~~~~ 409 (415)
T 2hqs_A 378 SVLNLVSTDGR--FKARLP-ATDGQVKF------PAWSPYL 409 (415)
T ss_dssp EEEEEEETTSC--CEEECC-CSSSEEEE------EEECCCC
T ss_pred cEEEEEECCCC--cEEEee-CCCCCCcC------Ccccccc
Confidence 68999999864 333333 23333443 7788854
No 27
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=6.2e-21 Score=215.99 Aligned_cols=255 Identities=15% Similarity=0.132 Sum_probs=184.8
Q ss_pred CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCC
Q 002164 199 DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLG 278 (958)
Q Consensus 199 DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~ 278 (958)
.+++|+|+.... .+.....|+++|++++..+.++..... +..++|||||+.|++...+.
T Consensus 142 ~~~~l~~~s~~~---~~~~~~~i~i~d~~g~~~~~l~~~~~~-----v~~~~~Spdg~~la~~s~~~------------- 200 (415)
T 2hqs_A 142 FRTRIAYVVQTN---GGQFPYELRVSDYDGYNQFVVHRSPQP-----LMSPAWSPDGSKLAYVTFES------------- 200 (415)
T ss_dssp TTCEEEEEEECS---SSSCCEEEEEEETTSCSCEEEEEESSC-----EEEEEECTTSSEEEEEECTT-------------
T ss_pred CCCEEEEEEecC---CCCccceEEEEcCCCCCCEEEeCCCCc-----ceeeEEcCCCCEEEEEEecC-------------
Confidence 488999987521 111127999999998888888765443 67899999999999882110
Q ss_pred CceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCcc
Q 002164 279 PKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYS 356 (958)
Q Consensus 279 ~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~ 356 (958)
+...|+++++ +|+.+.+... ..+..++|||||++|+|+....
T Consensus 201 ---------------------------------~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~--- 244 (415)
T 2hqs_A 201 ---------------------------------GRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT--- 244 (415)
T ss_dssp ---------------------------------SSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT---
T ss_pred ---------------------------------CCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC---
Confidence 2346999999 8887777765 6678999999999999887432
Q ss_pred ccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEE
Q 002164 357 FIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIY 436 (958)
Q Consensus 357 ~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~ 436 (958)
...+|++||+++++.+.++... .....+.|||||+.|++.... .....||
T Consensus 245 -------g~~~i~~~d~~~~~~~~l~~~~-------------~~~~~~~~spdg~~l~~~s~~----------~g~~~i~ 294 (415)
T 2hqs_A 245 -------GSLNLYVMDLASGQIRQVTDGR-------------SNNTEPTWFPDSQNLAFTSDQ----------AGRPQVY 294 (415)
T ss_dssp -------SSCEEEEEETTTCCEEECCCCS-------------SCEEEEEECTTSSEEEEEECT----------TSSCEEE
T ss_pred -------CCceEEEEECCCCCEEeCcCCC-------------CcccceEECCCCCEEEEEECC----------CCCcEEE
Confidence 1237999999988777776543 234578999999999985321 2234799
Q ss_pred EEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceE
Q 002164 437 TQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMR 516 (958)
Q Consensus 437 ~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (958)
++++ ++++.+.++.....+..+.|||||++|++....++ ...|++++++++ +...+.... .+.. ++
T Consensus 295 ~~d~---~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g-~~~i~~~d~~~~--~~~~l~~~~--~~~~------~~ 360 (415)
T 2hqs_A 295 KVNI---NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQHIAKQDLATG--GVQVLSSTF--LDET------PS 360 (415)
T ss_dssp EEET---TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSS-CEEEEEEETTTC--CEEECCCSS--SCEE------EE
T ss_pred EEEC---CCCCEEEEecCCCcccCeEECCCCCEEEEEECcCC-ceEEEEEECCCC--CEEEecCCC--CcCC------eE
Confidence 9995 66677777655556678999999999999876543 367999999875 333333221 2222 78
Q ss_pred eccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCc
Q 002164 517 RTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDK 572 (958)
Q Consensus 517 ~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~ 572 (958)
|+|||++|++..... ....||+||++++..++|....+
T Consensus 361 ~spdg~~l~~~s~~~------------------~~~~l~~~d~~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 361 LAPNGTMVIYSSSQG------------------MGSVLNLVSTDGRFKARLPATDG 398 (415)
T ss_dssp ECTTSSEEEEEEEET------------------TEEEEEEEETTSCCEEECCCSSS
T ss_pred EcCCCCEEEEEEcCC------------------CccEEEEEECCCCcEEEeeCCCC
Confidence 999999999987431 12369999999888888876654
No 28
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.9e-21 Score=237.70 Aligned_cols=343 Identities=14% Similarity=0.055 Sum_probs=210.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCce---eeeccCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE---IEIQGFP 186 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~---~~lt~~~ 186 (958)
.+..++|||||++|||.... . ...+-+....|++|++.+ ++. ++++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~----------------------~--~~~~~s~~~~i~~~d~~~----g~~~~~~~l~--- 109 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDY----------------------S--KLWRYSYTATYYIYDLSN----GEFVRGNELP--- 109 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEE----------------------E--ECSSSCEEEEEEEEETTT----TEECCSSCCC---
T ss_pred ceeeEEECCCCCeEEEEecC----------------------c--eeEEeecceEEEEEECCC----CccccceecC---
Confidence 36789999999999998762 0 001112236899999954 444 4442
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc--c------------ccccceEEe
Q 002164 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL--N------------AIFDNFVWV 252 (958)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~--~------------~~~~~~~ws 252 (958)
..+..++|||||++|||+. ..+||++++++|+.++++..+.... + .....++||
T Consensus 110 --~~~~~~~~SPDG~~la~~~----------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 110 --RPIQYLCWSPVGSKLAYVY----------QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp --SSBCCEEECSSTTCEEEEE----------TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred --cccccceECCCCCEEEEEE----------CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 2478899999999999975 3489999999999988875442110 0 001479999
Q ss_pred cCCeEEEEEecCCCCCCC---CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee--
Q 002164 253 NNSTLLVCTIPLLRGDPP---KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-- 326 (958)
Q Consensus 253 pDG~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-- 326 (958)
|||+.|++...+...... .....+..+.... . ..+..+. .....+|+++++ +++..
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~--------~-------~yp~~g~---~~~~~~l~~~d~~~~~~~~~ 239 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN--------I-------PYPKAGA---KNPVVRIFIIDTTYPAYVGP 239 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE--------E-------ECCBTTS---CCCEEEEEEEESSCHHHHCC
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCcccee--------e-------cCCCCCC---CCCeeEEEEEECCCCCccce
Confidence 999999998543222100 0000000000000 0 0000000 002357999999 66542
Q ss_pred -ecCC------C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEe----ccCceEEEecc---CCccccCc
Q 002164 327 -EIGP------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWT----TDGIFVRELCD---LPLAEDIP 391 (958)
Q Consensus 327 -~l~~------~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d----~~~~~~~~l~~---~~~~~~~p 391 (958)
.+.. . ..+..++|||||+.++...++.. ...+|++|| +++++.+.+.. ....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~---------~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~---- 306 (719)
T 1z68_A 240 QEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQ---------NVSVLSICDFREDWQTWDCPKTQEHIEESRT---- 306 (719)
T ss_dssp EECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESST---------TEEEEEEEEECSSSSSEECCGGGEEEEECSS----
T ss_pred eEccCCccCCCCcceEEEeEEeCCCeEEEEEecccc---------CeEEEEEEcccCCCCCCceEEEEecccccCC----
Confidence 4432 2 45678999999765544333211 123799999 77776655542 0000
Q ss_pred ccccccccCcc-----eeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecC
Q 002164 392 IAFNSVRKGMR-----SINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDD 466 (958)
Q Consensus 392 ~~~~~~~~~~~-----~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spD 466 (958)
..+. .+.|||||+.+++..... +....||++++ ++++.+.++...+.+..+.++ |
T Consensus 307 -------~~~~~~~~~~~~~spdg~~l~~~~~~~---------~g~~~l~~~~~---~~~~~~~lt~~~~~v~~~~~~-d 366 (719)
T 1z68_A 307 -------GWAGGFFVSTPVFSYDAISYYKIFSDK---------DGYKHIHYIKD---TVENAIQITSGKWEAINIFRV-T 366 (719)
T ss_dssp -------SCSSSSSCCCCEECTTSSCEEEEEECT---------TSCEEEEEESS---CSTTCEECSCSSSCEEEEEEE-C
T ss_pred -------ceEccccCCccEECCCCCeEEEEEEcc---------CCceEEEEEEC---CCCceEecccCceEEEEEEEE-e
Confidence 1122 678999999998864332 23457999985 667778887777777777778 9
Q ss_pred CceEEEEEec--c-ccceEEEEEcCCCCCCCcEEEecc---CCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEE
Q 002164 467 SLALVYESWY--K-TRRTRTWVISPGSKDVAPRILFDR---SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILL 540 (958)
Q Consensus 467 g~~l~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~ 540 (958)
|+.|+|.+.. + ....+||.++++++..+...++.. ....+.. ++|||||+++++.....
T Consensus 367 ~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~------~~~s~dg~~l~~~~s~~--------- 431 (719)
T 1z68_A 367 QDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYT------ASFSDYAKYYALVCYGP--------- 431 (719)
T ss_dssp SSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEE------EEECGGGSSEEEEECCB---------
T ss_pred CCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEE------EEECCCCCEEEEEcCCC---------
Confidence 9999999865 1 234789999986642223333321 1111112 67999999998876321
Q ss_pred ccCCCCCCCCCCeEEEEECCCCceEEEecC
Q 002164 541 NGNGATPEGNIPFLDLFDINTGSKERIWES 570 (958)
Q Consensus 541 ~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~ 570 (958)
..+.+++||+++|+..+++..
T Consensus 432 ---------~~p~~~l~d~~~g~~~~~~~~ 452 (719)
T 1z68_A 432 ---------GIPISTLHDGRTDQEIKILEE 452 (719)
T ss_dssp ---------SSCEEEEECSSSCCEEEEEEC
T ss_pred ---------CCCeEEEEECCCCCEEEEeec
Confidence 234688999988887766654
No 29
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.88 E-value=3.4e-21 Score=213.35 Aligned_cols=244 Identities=14% Similarity=0.149 Sum_probs=167.1
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEe-cCCCC------------------CCCCCCceEEEEECCCCCcCcccCCcccCCCC
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYL-PPGYD------------------PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPN 695 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~-P~~~~------------------~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~ 695 (958)
..+..+.+++...+| +.+.+|+ |.+.. ....+++|+||++|||++..+...
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~-------- 129 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSAS-------- 129 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTT--------
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCc--------
Confidence 456678999998888 7778887 87531 112346899999999865432211
Q ss_pred CCCCcCcHHHHHHHHC-CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChH
Q 002164 696 EFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG----VAHPS-KIAVGGHSYG 769 (958)
Q Consensus 696 ~~~~~~~~~~~~la~~-G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~----~~d~~-~i~l~G~S~G 769 (958)
.......+..|+++ ||+|+.++|+...+. .++..++|+.++++|+.++. .+|++ ||+|+|+|+|
T Consensus 130 --~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~G 199 (365)
T 3ebl_A 130 --STIYDSLCRRFVKLSKGVVVSVNYRRAPEH--------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSG 199 (365)
T ss_dssp --BHHHHHHHHHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHH
T ss_pred --hhhHHHHHHHHHHHCCCEEEEeeCCCCCCC--------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCcc
Confidence 01112345677775 999999888644322 23567899999999999765 58999 9999999999
Q ss_pred HHHHHHHHHhCCC---ceeEEEEeccCCCCCCCCCCcc--------c--ccchhhhcH------HHHHhcCccc-ccCCC
Q 002164 770 AFMTANLLAHAPH---LFCCGIARSGAYNRTLTPFGFQ--------N--EDRTLWEAT------STYVEMSPFM-SANKL 829 (958)
Q Consensus 770 G~~a~~~a~~~p~---~~~a~v~~~~~~~~~~~~~~~~--------~--~~~~~~~~~------~~~~~~sp~~-~~~~~ 829 (958)
|++|+.++.+.++ +++++|+++|+++......... . .....|... ......+|+. ....+
T Consensus 200 G~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 279 (365)
T 3ebl_A 200 GNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL 279 (365)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCC
T ss_pred HHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Confidence 9999999987654 7999999999877432110000 0 000011100 0001122332 23344
Q ss_pred C----CCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCC---CcccHHHHHHHHHHHHHHhhccCC
Q 002164 830 K----KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA---ARESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 830 ~----~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~---~~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
+ .|+||+||++|.. ..++.+++++|+..|+++++++|||++|.+. ..+...++++.+.+||+++++.+.
T Consensus 280 ~~~~~pP~Li~~G~~D~l----~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 280 GGLPFAKSLIIVSGLDLT----CDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGS 355 (365)
T ss_dssp TTSCCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC---
T ss_pred ccCCCCCEEEEEcCcccc----hhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence 4 5899999999965 4567899999999999999999999999875 345677899999999999987543
No 30
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.88 E-value=2.6e-21 Score=206.46 Aligned_cols=237 Identities=14% Similarity=0.097 Sum_probs=165.9
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCC-CCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDP-SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~-~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~v 715 (958)
+..+.+++. .+|..+.+.+|.|+.... ...++.|+||++|||.+..+. ... ....+..|+++||.|
T Consensus 2 m~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~--------~~~----~~~~~~~l~~~G~~v 68 (277)
T 3bxp_A 2 MQVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHS--------GRE----EAPIATRMMAAGMHT 68 (277)
T ss_dssp EEEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCC--------CTT----HHHHHHHHHHTTCEE
T ss_pred cceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCC--------Ccc----chHHHHHHHHCCCEE
Confidence 345667774 578889999999973210 112358999999997543221 111 124566788999999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC------------
Q 002164 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA------------ 780 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~------------ 780 (958)
++++++ |+|.... .....+.|+.++++|+.++. .+|+++|+|+|+|+||.+|+.++.+.
T Consensus 69 ~~~d~~---g~g~~~~---~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 142 (277)
T 3bxp_A 69 VVLNYQ---LIVGDQS---VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLD 142 (277)
T ss_dssp EEEECC---CSTTTCC---CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCT
T ss_pred EEEecc---cCCCCCc---cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcc
Confidence 996554 5442111 23467889999999998863 36788999999999999999999984
Q ss_pred --CCceeEEEEeccCCCCCCCCCCcccccchhh-hcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHH
Q 002164 781 --PHLFCCGIARSGAYNRTLTPFGFQNEDRTLW-EATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (958)
Q Consensus 781 --p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~ 857 (958)
+.+++++|+.+|..+.... +.. ..... .....+...+|...+.++.+|+|++||++|..+| ++++.+++++
T Consensus 143 ~~~~~~~~~v~~~p~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~ 216 (277)
T 3bxp_A 143 HYQGQHAAIILGYPVIDLTAG---FPT-TSAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVP--PINSLKYVQA 216 (277)
T ss_dssp TCCCCCSEEEEESCCCBTTSS---SSS-SHHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSC--THHHHHHHHH
T ss_pred cccCCcCEEEEeCCcccCCCC---CCC-ccccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccC--hHHHHHHHHH
Confidence 6789999999998763321 110 00000 0001233467777788888999999999999999 9999999999
Q ss_pred HHhCCCcEEEEEeCCCCccCCCcc--------------cHHHHHHHHHHHHHHhh
Q 002164 858 LKGHGALCRLVILPFESHGYAARE--------------SIMHVLWETDRWLQKYC 898 (958)
Q Consensus 858 l~~~g~~~~~~~~p~~~H~~~~~~--------------~~~~~~~~i~~fl~~~l 898 (958)
++..+.+++++++++++|.+.... ....+++.+.+||.++.
T Consensus 217 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 217 MLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 999999999999999999764322 24678889999998864
No 31
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=2e-20 Score=228.07 Aligned_cols=333 Identities=12% Similarity=0.116 Sum_probs=213.1
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCC
Q 002164 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (958)
Q Consensus 109 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~ 188 (958)
..+..++|||| ++++|.... .|++|++.+ +..++++.. .
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~----------------------------------~i~~~d~~~----~~~~~l~~~--~ 120 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQG----------------------------------GLVGFDMLA----RKVTYLFDT--N 120 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETT----------------------------------EEEEEETTT----TEEEEEECC--T
T ss_pred cCceeEEECCC-CeEEEEECC----------------------------------EEEEEECCC----CceEEccCC--c
Confidence 35778999999 889888653 899999855 555666542 2
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCC-----CceeeccCCCCccc-cc---------cccceEEec
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-----GKARPLFQSPDIYL-NA---------IFDNFVWVN 253 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~-----g~~~~lt~~~~~~~-~~---------~~~~~~wsp 253 (958)
..+..++|||||++|+|+. ..+||++++++ |+.++++....... ++ .+..+.|||
T Consensus 121 ~~~~~~~~SpdG~~la~~~----------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp 190 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAYVR----------NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP 190 (706)
T ss_dssp TCCTTCEECTTSSEEEEEE----------TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT
T ss_pred ccccCCcCCCCCCEEEEEE----------CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC
Confidence 4688999999999999964 46899999999 99888876554310 00 025899999
Q ss_pred CCeEEEEEecCCCCCCC-CCC-CCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCC
Q 002164 254 NSTLLVCTIPLLRGDPP-KKP-LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP 330 (958)
Q Consensus 254 DG~~l~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~ 330 (958)
||+.|++...+...... ... .....+.... . ..+..+ ......+|+++++ +|+.+.+..
T Consensus 191 Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~--------~-------~y~~~g---~~~~~~~l~~~d~~~~~~~~~~~ 252 (706)
T 2z3z_A 191 KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP--------L-------YYPMAG---TPSHHVTVGIYHLATGKTVYLQT 252 (706)
T ss_dssp TSSEEEEEEEECTTSCCEEEEECCSSSCEEEE--------E-------CCCBTT---SCCCEEEEEEEETTTTEEEECCC
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCceEE--------e-------eCCCCC---CCCCeeEEEEEECCCCceEeecc
Confidence 99999998533222100 000 0000000000 0 000000 0003467999999 887776653
Q ss_pred C----ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCc-eEEEeccCCccccCcccccccccCcceee
Q 002164 331 P----AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (958)
Q Consensus 331 ~----~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ 405 (958)
. ..+..++|||||++|++.+.... .....+++||++++ ..+.+....... +. .....+.
T Consensus 253 ~~~~~~~~~~~~~spdg~~l~~~~~~~~--------~~~~~v~~~d~~~g~~~~~~~~~~~~~----~~----~~~~~~~ 316 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSPDENILYVAEVNRA--------QNECKVNAYDAETGRFVRTLFVETDKH----YV----EPLHPLT 316 (706)
T ss_dssp CSCTTCEEEEEEECTTSSEEEEEEECTT--------SCEEEEEEEETTTCCEEEEEEEEECSS----CC----CCCSCCE
T ss_pred CCCCceeEeeEEEECCCCEEEEEEeCCC--------CCeeEEEEEECCCCceeeEEEEccCCC----eE----CccCCce
Confidence 2 45678999999999999874421 11248999999977 665554311110 00 0124678
Q ss_pred eec--CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCc-eeeecCCceEEEEEeccc-cce
Q 002164 406 WRS--DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGG-ISWCDDSLALVYESWYKT-RRT 481 (958)
Q Consensus 406 ~sp--DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~-~~~spDg~~l~~~~~~~~-~~~ 481 (958)
||| ||+.++. . .. +....||.++. +++..+.++...+.+.. +.|||||+.|+|....++ ...
T Consensus 317 ~sp~~dg~~l~~-~-~~---------~g~~~l~~~~~---~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~ 382 (706)
T 2z3z_A 317 FLPGSNNQFIWQ-S-RR---------DGWNHLYLYDT---TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLER 382 (706)
T ss_dssp ECTTCSSEEEEE-E-CT---------TSSCEEEEEET---TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCB
T ss_pred eecCCCCEEEEE-E-cc---------CCccEEEEEEC---CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceE
Confidence 999 9984433 1 11 23456888884 66667777776666655 799999999999876543 236
Q ss_pred EEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCC
Q 002164 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (958)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~ 561 (958)
.||.++++++ ....+.. ...+.. ++|||||++|++..... .....|++||+++
T Consensus 383 ~l~~~d~~~~--~~~~l~~--~~~~~~------~~~spdg~~l~~~~~~~-----------------~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 383 HFYCIDIKGG--KTKDLTP--ESGMHR------TQLSPDGSAIIDIFQSP-----------------TVPRKVTVTNIGK 435 (706)
T ss_dssp EEEEEETTCC--CCEESCC--SSSEEE------EEECTTSSEEEEEEECS-----------------SCSCEEEEEESSS
T ss_pred EEEEEEcCCC--CceeccC--CCceEE------EEECCCCCEEEEEecCC-----------------CCCcEEEEEECCC
Confidence 8999998875 3344432 122222 78999999999886321 1234699999988
Q ss_pred CceEEE
Q 002164 562 GSKERI 567 (958)
Q Consensus 562 g~~~~l 567 (958)
++...+
T Consensus 436 ~~~~~~ 441 (706)
T 2z3z_A 436 GSHTLL 441 (706)
T ss_dssp CEEEEE
T ss_pred CeEeec
Confidence 874333
No 32
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.87 E-value=1.6e-20 Score=196.94 Aligned_cols=211 Identities=17% Similarity=0.168 Sum_probs=163.4
Q ss_pred EEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCC
Q 002164 641 LIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT 720 (958)
Q Consensus 641 ~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~ 720 (958)
.+++++.+| .+.++++.|.+ .+.|+||++||.+...+. .........+..|+++||.|+.
T Consensus 25 ~~~~~~~~g-~l~~~~~~p~~------~~~p~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~G~~v~~--- 84 (249)
T 2i3d_A 25 EVIFNGPAG-RLEGRYQPSKE------KSAPIAIILHPHPQFGGT----------MNNQIVYQLFYLFQKRGFTTLR--- 84 (249)
T ss_dssp EEEEEETTE-EEEEEEECCSS------TTCCEEEEECCCGGGTCC----------TTSHHHHHHHHHHHHTTCEEEE---
T ss_pred EEEEECCCc-eEEEEEEcCCC------CCCCEEEEECCCcccCCC----------ccchHHHHHHHHHHHCCCEEEE---
Confidence 888999888 89999998853 237999999995321110 0000112456678899999999
Q ss_pred CCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC
Q 002164 721 TPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (958)
Q Consensus 721 ~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~ 800 (958)
.+.+|+|.+..........++|+.++++++.++. .++++++++|||+||.+++.++.+.|+ ++++|+++|..+...
T Consensus 85 ~d~~g~G~s~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-- 160 (249)
T 2i3d_A 85 FNFRSIGRSQGEFDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD-- 160 (249)
T ss_dssp ECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC--
T ss_pred ECCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh--
Confidence 4555677665443322344599999999999885 477899999999999999999999988 999999998754210
Q ss_pred CCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHh-CCCcEEEEEeCCCCccCCC
Q 002164 801 FGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKG-HGALCRLVILPFESHGYAA 879 (958)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~-~g~~~~~~~~p~~~H~~~~ 879 (958)
...+.++++|+|+++|++|..+| +..++++++.++. .+.+++++++|+++|.+.
T Consensus 161 ----------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~- 215 (249)
T 2i3d_A 161 ----------------------FSFLAPCPSSGLIINGDADKVAP--EKDVNGLVEKLKTQKGILITHRTLPGANHFFN- 215 (249)
T ss_dssp ----------------------CTTCTTCCSCEEEEEETTCSSSC--HHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-
T ss_pred ----------------------hhhhcccCCCEEEEEcCCCCCCC--HHHHHHHHHHHhhccCCceeEEEECCCCcccc-
Confidence 12345678999999999999999 9999999999986 456899999999999985
Q ss_pred cccHHHHHHHHHHHHHHhhccC
Q 002164 880 RESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 880 ~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
+....+.+.+.+||.+++...
T Consensus 216 -~~~~~~~~~i~~fl~~~l~~~ 236 (249)
T 2i3d_A 216 -GKVDELMGECEDYLDRRLNGE 236 (249)
T ss_dssp -TCHHHHHHHHHHHHHHHHTTC
T ss_pred -cCHHHHHHHHHHHHHHhcCCC
Confidence 567888999999999998643
No 33
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.87 E-value=2e-21 Score=208.88 Aligned_cols=232 Identities=16% Similarity=0.115 Sum_probs=172.0
Q ss_pred cEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEE
Q 002164 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (958)
Q Consensus 638 ~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~ 717 (958)
..+.++++. +|.++.++++.|+ +.|+||++||++.. .. .....+..|+++||.|++
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~~~-----------~~----~~~~~~~~l~~~g~~v~~ 60 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWGGS-----------QH----HSLVRAREAVGLGCICMT 60 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTTCC-----------TT----TTHHHHHHHHTTTCEEEC
T ss_pred ceeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCCCC-----------cC----cHHHHHHHHHHCCCEEEE
Confidence 456777877 8899999999986 27999999996421 11 123456778889999999
Q ss_pred cCCCCCCCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCC
Q 002164 718 GPTTPIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (958)
Q Consensus 718 ~~~~~~~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (958)
.+.+|+|.+.... .......+|+.++++++.+++.+|+++|+|+|||+||.+++.++.+.| ++++++.+|...
T Consensus 61 ---~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~ 135 (290)
T 3ksr_A 61 ---FDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALY 135 (290)
T ss_dssp ---CCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCC
T ss_pred ---eecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchh
Confidence 5556777664432 245677899999999999998888899999999999999999999986 788888887654
Q ss_pred CCCCCCCcccc-------cchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 002164 796 RTLTPFGFQNE-------DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (958)
Q Consensus 796 ~~~~~~~~~~~-------~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (958)
... .|..... ....+.....+...++...+.++++|+|++||++|..++ +.++.++++.++..+ +++++
T Consensus 136 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~~~~~~-~~~~~ 211 (290)
T 3ksr_A 136 KDA-HWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVP--HPVMRNYADAFTNAR-SLTSR 211 (290)
T ss_dssp CSS-CTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSC--HHHHHHHHHHTTTSS-EEEEE
T ss_pred hhh-hhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccC--hHHHHHHHHHhccCC-CceEE
Confidence 221 1111000 000111111111223334556788999999999999999 999999999998765 79999
Q ss_pred EeCCCCccCCCcccHHHHHHHHHHHHHHhhccCC
Q 002164 869 ILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 869 ~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
++|+++|.+...+....+.+.+.+||.+++....
T Consensus 212 ~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~~~ 245 (290)
T 3ksr_A 212 VIAGADHALSVKEHQQEYTRALIDWLTEMVVGRR 245 (290)
T ss_dssp EETTCCTTCCSHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EcCCCCCCCCcchHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999987666778889999999999987543
No 34
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=2.3e-20 Score=237.06 Aligned_cols=272 Identities=8% Similarity=-0.015 Sum_probs=189.5
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..|.|||| +|+|+.. .++..+||.++.+++..++++.... +..++|||||+.|++.
T Consensus 205 ~v~~~~~s~d--~l~~~~~------~dg~~~l~~~~~~g~~~~~l~~~~~------~~~~~~SpDG~~la~~-------- 262 (1045)
T 1k32_A 205 HVSSPVIVGH--RIYFITD------IDGFGQIYSTDLDGKDLRKHTSFTD------YYPRHLNTDGRRILFS-------- 262 (1045)
T ss_dssp CCEEEEEETT--EEEEEEC------TTSSCEEEEEETTSCSCEECCCCCS------SCEEEEEESSSCEEEE--------
T ss_pred cccceEEeCC--EEEEEEe------ccCceEEEEEeCCCCcceEecCCCC------cceeeEcCCCCEEEEE--------
Confidence 4556778776 7777653 3467799999999988888876553 4467999999999987
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC------------ccccc
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------------AVYTS 336 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~------------~~~~~ 336 (958)
....||++++ .+....+... ..+..
T Consensus 263 ------------------------------------------~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~ 300 (1045)
T 1k32_A 263 ------------------------------------------KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFA 300 (1045)
T ss_dssp ------------------------------------------ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGE
T ss_pred ------------------------------------------eCCEEEEecCCceEeeeeccCcccccccccccccccce
Confidence 1234777776 4444444331 25788
Q ss_pred cccC-CCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceE
Q 002164 337 LDPS-PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 337 ~~~S-pDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
++|| |||++|++.+. +++++|++.++..+.++..+. ..+..+.|+ ||+.+++
T Consensus 301 ~~~S~pdG~~la~~~~--------------~~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~s-dg~~l~~ 353 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVSR--------------GQAFIQDVSGTYVLKVPEPLR------------IRYVRRGGD-TKVAFIH 353 (1045)
T ss_dssp EEEEECGGGCEEEEET--------------TEEEEECTTSSBEEECSCCSC------------EEEEEECSS-SEEEEEE
T ss_pred eeecCCCCCEEEEEEc--------------CEEEEEcCCCCceEEccCCCc------------ceEEeeeEc-CCCeEEE
Confidence 9999 99999999872 289999998877766654321 134678999 9999988
Q ss_pred EEEeccCCCcccccccCCeEE-EEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCC
Q 002164 416 WAETQDGGDAKVEVTPRDIIY-TQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA 494 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~ 494 (958)
. +....+| ++++ ++++.+.++.....+..++|||||++|++.... ..|+++++.++ +
T Consensus 354 ~-------------s~~~~l~~~~d~---~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~----~~v~~~d~~tg--~ 411 (1045)
T 1k32_A 354 G-------------TREGDFLGIYDY---RTGKAEKFEENLGNVFAMGVDRNGKFAVVANDR----FEIMTVDLETG--K 411 (1045)
T ss_dssp E-------------ETTEEEEEEEET---TTCCEEECCCCCCSEEEEEECTTSSEEEEEETT----SEEEEEETTTC--C
T ss_pred E-------------ECCCceEEEEEC---CCCCceEecCCccceeeeEECCCCCEEEEECCC----CeEEEEECCCC--c
Confidence 5 2245788 8985 667777776445667789999999999988643 36889998875 4
Q ss_pred cEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCccc
Q 002164 495 PRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEK 574 (958)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~ 574 (958)
...+.......+.. ++|||||++|++.....+. .........|++||+++++.+.++.....
T Consensus 412 ~~~~~~~~~~~v~~------~~~SpDG~~la~~~~~~~~-----------~~~~~~~~~i~l~d~~~g~~~~l~~~~~~- 473 (1045)
T 1k32_A 412 PTVIERSREAMITD------FTISDNSRFIAYGFPLKHG-----------ETDGYVMQAIHVYDMEGRKIFAATTENSH- 473 (1045)
T ss_dssp EEEEEECSSSCCCC------EEECTTSCEEEEEEEECSS-----------TTCSCCEEEEEEEETTTTEEEECSCSSSB-
T ss_pred eEEeccCCCCCccc------eEECCCCCeEEEEecCccc-----------cccCCCCCeEEEEECCCCcEEEeeCCCcc-
Confidence 44444333333333 8899999999988742100 00001234799999999887777654432
Q ss_pred ccceeEeecCCCccccccccCCEEEEEEe
Q 002164 575 YYETTVALMSDQTEGDLYLNQLKILTSKE 603 (958)
Q Consensus 575 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 603 (958)
.. .+.|+|||+.+++...
T Consensus 474 ----~~-------~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 474 ----DY-------APAFDADSKNLYYLSY 491 (1045)
T ss_dssp ----EE-------EEEECTTSCEEEEEES
T ss_pred ----cC-------CceEcCCCCEEEEEec
Confidence 11 2579999999888765
No 35
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.86 E-value=9.2e-21 Score=215.01 Aligned_cols=221 Identities=19% Similarity=0.193 Sum_probs=158.1
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcc
Q 002164 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE 730 (958)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~ 730 (958)
.+.+++|+|++ .++.|+||++||+... .....+..|+++||.|+++++++ +|.+.
T Consensus 144 ~l~~~l~~P~~-----~~~~P~Vv~~hG~~~~-----------------~~~~~a~~La~~Gy~V~a~D~rG---~g~~~ 198 (422)
T 3k2i_A 144 RVRATLFLPPG-----PGPFPGIIDIFGIGGG-----------------LLEYRASLLAGHGFATLALAYYN---FEDLP 198 (422)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCTTCS-----------------CCCHHHHHHHTTTCEEEEEECSS---STTSC
T ss_pred cEEEEEEcCCC-----CCCcCEEEEEcCCCcc-----------------hhHHHHHHHHhCCCEEEEEccCC---CCCCC
Confidence 68999999975 3458999999996321 11234678899999999966654 44332
Q ss_pred cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccc----
Q 002164 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE---- 806 (958)
Q Consensus 731 ~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~---- 806 (958)
... .....+|+.++++||.++..+|+++|+|+||||||.+|+.++.++|+ ++++|+++|........+.+...
T Consensus 199 ~~~--~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 275 (422)
T 3k2i_A 199 NNM--DNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPP 275 (422)
T ss_dssp SSC--SCEETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECC
T ss_pred CCc--ccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCC
Confidence 211 11236788999999999988899999999999999999999999987 99999988875322211111000
Q ss_pred -----------------cchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHH-HHHHHHHHhCCCc-EEE
Q 002164 807 -----------------DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGAL-CRL 867 (958)
Q Consensus 807 -----------------~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~-~~~~~~l~~~g~~-~~~ 867 (958)
....+..+......+....+.++++|+|++||++|..+| .... .++.++|+..+.+ +++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 353 (422)
T 3k2i_A 276 LGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWR--SELYAQTVSERLQAHGKEKPQI 353 (422)
T ss_dssp CCBCGGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCC--HHHHHHHHHHHHHhcCCCCCEE
Confidence 000111111111223334567789999999999999998 7755 6899999999988 999
Q ss_pred EEeCCCCccCCC---------------------------cccHHHHHHHHHHHHHHhhccC
Q 002164 868 VILPFESHGYAA---------------------------RESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 868 ~~~p~~~H~~~~---------------------------~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
++||+++|.+.. .+...++++.+.+||+++|...
T Consensus 354 ~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 354 ICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp EEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999732 1446778899999999999754
No 36
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.86 E-value=8.5e-21 Score=216.27 Aligned_cols=221 Identities=14% Similarity=0.189 Sum_probs=155.8
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcc
Q 002164 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEE 730 (958)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~ 730 (958)
.+.+++|+|++ .++.|+||++||+... .....+..|+++||.|+++++++..+.....
T Consensus 160 ~l~~~l~~P~~-----~~~~P~Vv~lhG~~~~-----------------~~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~ 217 (446)
T 3hlk_A 160 RVRGTLFLPPE-----PGPFPGIVDMFGTGGG-----------------LLEYRASLLAGKGFAVMALAYYNYEDLPKTM 217 (446)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCSSCS-----------------CCCHHHHHHHTTTCEEEEECCSSSTTSCSCC
T ss_pred eEEEEEEeCCC-----CCCCCEEEEECCCCcc-----------------hhhHHHHHHHhCCCEEEEeccCCCCCCCcch
Confidence 68999999975 3458999999996421 0113467889999999997776543322211
Q ss_pred cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccc----
Q 002164 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE---- 806 (958)
Q Consensus 731 ~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~---- 806 (958)
.. ..++|+.++++||.++..+|+++|+|+||||||.+|+.++.++|+ ++++|+++|........+.+...
T Consensus 218 ~~-----~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 291 (446)
T 3hlk_A 218 ET-----LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPP 291 (446)
T ss_dssp SE-----EEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECC
T ss_pred hh-----CCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCc
Confidence 11 227788999999999988999999999999999999999999987 99999998865322111110000
Q ss_pred -----------------cchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHH-HHHHHHHHhCCCc-EEE
Q 002164 807 -----------------DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGAL-CRL 867 (958)
Q Consensus 807 -----------------~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~-~~~~~~l~~~g~~-~~~ 867 (958)
....+..+...........+.++++|+|++||++|..+| .... .+++++|+..|.+ +++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~~~~~~l~~~g~~~~~l 369 (446)
T 3hlk_A 292 VGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWK--SEFYANEACKRLQAHGRRKPQI 369 (446)
T ss_dssp CCBCGGGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHHHHHTTCCCCEE
T ss_pred cccchhccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcC--hHHHHHHHHHHHHHcCCCCcEE
Confidence 000011111111112223366788999999999999998 7554 7899999999988 899
Q ss_pred EEeCCCCccCC---------------------------CcccHHHHHHHHHHHHHHhhccC
Q 002164 868 VILPFESHGYA---------------------------ARESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 868 ~~~p~~~H~~~---------------------------~~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
++||+++|.+. ..+...+.++.+.+||+++|...
T Consensus 370 ~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 370 ICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp EEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999983 12235678899999999999654
No 37
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.86 E-value=5.7e-21 Score=210.23 Aligned_cols=236 Identities=16% Similarity=0.130 Sum_probs=170.0
Q ss_pred CCCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCc
Q 002164 634 LASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (958)
Q Consensus 634 ~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (958)
...+..+.+++++.+|.++.++++.|++. .++.|+||++||++.... + ......|+++||
T Consensus 63 ~~~~~~~~~~~~~~dg~~i~~~~~~P~~~----~~~~p~vv~~HG~g~~~~------------~----~~~~~~l~~~G~ 122 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGGRG------------F----PHDWLFWPSMGY 122 (337)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCCCC------------C----GGGGCHHHHTTC
T ss_pred CCCeEEEEEEEEcCCCCEEEEEEEecCCC----CCCccEEEEEcCCCCCCC------------C----chhhcchhhCCC
Confidence 34456889999999999999999999763 235899999999743211 1 112336788999
Q ss_pred EEEEcCCCCCCCCCC--cccc----------------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChH
Q 002164 714 AILGGPTTPIIGEGD--EEAN----------------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYG 769 (958)
Q Consensus 714 ~vl~~~~~~~~G~G~--~~~~----------------------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~G 769 (958)
+|+++++++..+.+. +... ...+...+.|+.++++++.+++.+|+++|+|+|+|+|
T Consensus 123 ~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~G 202 (337)
T 1vlq_A 123 ICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQG 202 (337)
T ss_dssp EEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred EEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHH
Confidence 999966654432211 1111 1123578999999999999998889999999999999
Q ss_pred HHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCc-----ccccchhh--------hcHHHHHhcCcccccCCCCCCEEEE
Q 002164 770 AFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGF-----QNEDRTLW--------EATSTYVEMSPFMSANKLKKPILLV 836 (958)
Q Consensus 770 G~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~-----~~~~~~~~--------~~~~~~~~~sp~~~~~~~~~P~Lii 836 (958)
|.+++.++.+.| +++++|+.+|..+........ .......+ .....+..+++...+.++++|+|++
T Consensus 203 G~la~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 281 (337)
T 1vlq_A 203 GGIALAVSALSK-KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFS 281 (337)
T ss_dssp HHHHHHHHHHCS-SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHhcCC-CccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEE
Confidence 999999999997 599999888854321000000 00000000 0012234456777888999999999
Q ss_pred eeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
||++|.++| ++++.+++++++. +++++++|+++|.+.. ....+.+.+||.++|.
T Consensus 282 ~G~~D~~~p--~~~~~~~~~~l~~---~~~~~~~~~~gH~~~~----~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 282 VGLMDNICP--PSTVFAAYNYYAG---PKEIRIYPYNNHEGGG----SFQAVEQVKFLKKLFE 335 (337)
T ss_dssp EETTCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCTTTTH----HHHHHHHHHHHHHHHC
T ss_pred eeCCCCCCC--chhHHHHHHhcCC---CcEEEEcCCCCCCCcc----hhhHHHHHHHHHHHHh
Confidence 999999998 9999999888764 5899999999999632 3456889999999985
No 38
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.86 E-value=2.4e-20 Score=204.00 Aligned_cols=233 Identities=15% Similarity=0.149 Sum_probs=165.8
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~v 715 (958)
+..+.+++++.+| .+.+++|+|.+. +.|+||++|||++..++ ...+ ...+..|++ +||+|
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~~------~~p~vv~~HGgg~~~g~--------~~~~----~~~~~~la~~~g~~V 121 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQPT------SQATLYYLHGGGFILGN--------LDTH----DRIMRLLARYTGCTV 121 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSSS------CSCEEEEECCSTTTSCC--------TTTT----HHHHHHHHHHHCSEE
T ss_pred cceEEEEeecCCC-CeEEEEEeCCCC------CCcEEEEECCCCcccCC--------hhhh----HHHHHHHHHHcCCEE
Confidence 4458899999888 899999999751 24999999998644322 1122 234667777 79999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc------eeE
Q 002164 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL------FCC 786 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~------~~a 786 (958)
+.++++...++ .+...++|+.++++|+.++. .+|++||+|+|+|+||++|+.++.+.+++ +++
T Consensus 122 ~~~dyr~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 193 (326)
T 3ga7_A 122 IGIDYSLSPQA--------RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIA 193 (326)
T ss_dssp EEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEE
T ss_pred EEeeCCCCCCC--------CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceE
Confidence 99887644332 23466799999999999874 47999999999999999999999887653 899
Q ss_pred EEEeccCCCCCCCCCC--cccc------c--chhhhcH--HHHHhcCccc-----ccCCCCCCEEEEeeCCCCCCCCChH
Q 002164 787 GIARSGAYNRTLTPFG--FQNE------D--RTLWEAT--STYVEMSPFM-----SANKLKKPILLVHGEEDNNSGTLTM 849 (958)
Q Consensus 787 ~v~~~~~~~~~~~~~~--~~~~------~--~~~~~~~--~~~~~~sp~~-----~~~~~~~P~Lii~G~~D~~v~~~~~ 849 (958)
+++.+|+++....... +... . ...+... ......+|.. .+.+..+|+||+||+.|..+ .
T Consensus 194 ~vl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~----~ 269 (326)
T 3ga7_A 194 ILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI----D 269 (326)
T ss_dssp EEEESCCCSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH----H
T ss_pred EEEeccccccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH----H
Confidence 9999998764321100 0000 0 0000000 0001112221 23345679999999999874 5
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCccCCCc----ccHHHHHHHHHHHHHHhhcc
Q 002164 850 QSDRFFNALKGHGALCRLVILPFESHGYAAR----ESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 850 ~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~----~~~~~~~~~i~~fl~~~l~~ 900 (958)
++.+++++|+..|+++++++||+++|.+... +...++++.+.+||.+++..
T Consensus 270 ~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 270 DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999998432 34578899999999999853
No 39
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.85 E-value=2e-20 Score=209.06 Aligned_cols=226 Identities=17% Similarity=0.218 Sum_probs=165.7
Q ss_pred cEEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 638 ~~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
..+.++|.+. +|..+.+++|+|+++++.+ ++|+||++||++........+.... .++..+ ........+|+.|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~--~~Pvvv~lHG~g~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~vv 217 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDR--KYPLVVFLHGAGERGTDNYLQVAGN-RGAVVW--AQPRYQVVHPCFVL 217 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTS--CEEEEEEECCGGGCSSSSSHHHHSS-TTTTGG--GSHHHHTTSCCEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCC--CccEEEEECCCCCCCCchhhhhhcc-ccceee--cCccccccCCEEEE
Confidence 3567889988 9999999999999876544 5999999999764322211111100 011111 11223456889999
Q ss_pred EcCCCCCCCCCCcccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 717 GGPTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
.+++++..++|..+.. .......+.|+.++++++.++..+|++||+|+|||+||++++.++.++|++|+++|+++|.
T Consensus 218 ~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 218 APQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp EECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred EecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 9888766665544321 1122456788899999999987799999999999999999999999999999999999987
Q ss_pred CCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCC-CCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC
Q 002164 794 YNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF 872 (958)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~ 872 (958)
.+. ..+.+++ +|+|++||++|..+| +.++++++++|+..|.++++++||+
T Consensus 298 ~~~---------------------------~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~g~~~~~~~~~~ 348 (380)
T 3doh_A 298 GDV---------------------------SKVERIKDIPIWVFHAEDDPVVP--VENSRVLVKKLAEIGGKVRYTEYEK 348 (380)
T ss_dssp CCG---------------------------GGGGGGTTSCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEECT
T ss_pred CCh---------------------------hhhhhccCCCEEEEecCCCCccC--HHHHHHHHHHHHHCCCceEEEEecC
Confidence 420 1122233 899999999999999 9999999999999999999999999
Q ss_pred C---CccCCCcccHHHHHH--HHHHHHHHh
Q 002164 873 E---SHGYAARESIMHVLW--ETDRWLQKY 897 (958)
Q Consensus 873 ~---~H~~~~~~~~~~~~~--~i~~fl~~~ 897 (958)
+ +|.+.........+. .+++||.++
T Consensus 349 ~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 349 GFMEKHGWDPHGSWIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp THHHHTTCCTTCTHHHHHTCHHHHHHHHTC
T ss_pred CcccCCCCCCchhHHHhcCCHHHHHHHHhh
Confidence 8 444433333445555 889999875
No 40
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=1.2e-20 Score=224.47 Aligned_cols=295 Identities=10% Similarity=0.021 Sum_probs=195.6
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCcee
Q 002164 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (958)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~ 180 (958)
.++++... ++..++|||||++|||++.. + +.+.||++.+ +..+
T Consensus 15 ~~~~~~~~-~~~~~~~~~DG~~la~~s~~----------------------~----------g~~~lw~~~~----g~~~ 57 (582)
T 3o4h_A 15 DVERLIAV-EKYSLQGVVDGDKLLVVGFS----------------------E----------GSVNAYLYDG----GETV 57 (582)
T ss_dssp HHHHHHHS-CEEEEEEEETTTEEEEEEEE----------------------T----------TEEEEEEEET----TEEE
T ss_pred HHHHHhcc-chheeecCCCCCeEEEEEcc----------------------C----------CceeEEEEcC----CCcE
Confidence 34455555 57889999999999998862 1 2445666633 6777
Q ss_pred eeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEc--CCCceeeccCCCCccccccccceEEecCCeEE
Q 002164 181 EIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV--DTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (958)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~--~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l 258 (958)
+++... ...+..|+|||| +|+|+.+. ..++....||++++ +++.. +++.... ....+|+|||+.+
T Consensus 58 ~lt~~~-~~~~~~~~~spd--~~l~~~~~---~~g~~~~~l~~~~~~~~g~~~-~l~~~~~------~~~~~~s~dg~~~ 124 (582)
T 3o4h_A 58 KLNREP-INSVLDPHYGVG--RVILVRDV---SKGAEQHALFKVNTSRPGEEQ-RLEAVKP------MRILSGVDTGEAV 124 (582)
T ss_dssp ECCSSC-CSEECEECTTCS--EEEEEEEC---STTSCCEEEEEEETTSTTCCE-ECTTSCS------BEEEEEEECSSCE
T ss_pred eeeccc-ccccccccCCCC--eEEEEecc---CCCCcceEEEEEeccCCCccc-cccCCCC------ceeeeeCCCCCeE
Confidence 887532 136889999999 68887652 12345678999998 66554 6765544 3367899999887
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCCcccccc
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAVYTSL 337 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~~~~~~~ 337 (958)
++++.. ...++++++ +|+.++++.... .++
T Consensus 125 ~~~s~~------------------------------------------------~~~~~l~d~~~g~~~~l~~~~~-~~~ 155 (582)
T 3o4h_A 125 VFTGAT------------------------------------------------EDRVALYALDGGGLRELARLPG-FGF 155 (582)
T ss_dssp EEEEEC------------------------------------------------SSCEEEEEEETTEEEEEEEESS-CEE
T ss_pred EEEecC------------------------------------------------CCCceEEEccCCcEEEeecCCC-ceE
Confidence 776211 112345688 888888876522 788
Q ss_pred ccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEE
Q 002164 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (958)
Q Consensus 338 ~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~ 417 (958)
.|||||++|++.+.+... ..+|++||+++++.+.|+... .....++|||||+.|+. .
T Consensus 156 ~~spDG~~la~~~~~~~~---------~~~i~~~d~~~g~~~~l~~~~-------------~~~~~~~~SpDG~~l~~-~ 212 (582)
T 3o4h_A 156 VSDIRGDLIAGLGFFGGG---------RVSLFTSNLSSGGLRVFDSGE-------------GSFSSASISPGMKVTAG-L 212 (582)
T ss_dssp EEEEETTEEEEEEEEETT---------EEEEEEEETTTCCCEEECCSS-------------CEEEEEEECTTSCEEEE-E
T ss_pred EECCCCCEEEEEEEcCCC---------CeEEEEEcCCCCCceEeecCC-------------CccccceECCCCCEEEE-c
Confidence 999999999988865321 237999999988888887543 22367899999999883 2
Q ss_pred EeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCcee--------eecCCceEEEEEeccccceEEEEEcCC
Q 002164 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGIS--------WCDDSLALVYESWYKTRRTRTWVISPG 489 (958)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~--------~spDg~~l~~~~~~~~~~~~l~~~~~~ 489 (958)
+. .....||++++ ++++.+.++..+..+..+. ||||| .|+++...++. .+||.+
T Consensus 213 ~~----------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~-~~l~~~--- 274 (582)
T 3o4h_A 213 ET----------AREARLVTVDP---RDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGR-SAVFID--- 274 (582)
T ss_dssp EC----------SSCEEEEEECT---TTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTE-EEEEET---
T ss_pred cC----------CCeeEEEEEcC---CCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCc-EEEEEE---
Confidence 11 12347999996 6667664445555666777 99999 77777665543 667776
Q ss_pred CCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEE
Q 002164 490 SKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (958)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l 567 (958)
+ +... .....+.+ ++|| ||+.++..... ...+.||++|+++ +.++|
T Consensus 275 g---~~~~---~~~~~v~~------~~~s-dg~~l~~~s~~------------------~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 275 G---ERVE---APQGNHGR------VVLW-RGKLVTSHTSL------------------STPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp T---EEEC---CCSSEEEE------EEEE-TTEEEEEEEET------------------TEEEEEEEETTCC-EEECC
T ss_pred C---Ceec---cCCCceEE------EEec-CCEEEEEEcCC------------------CCCCeEEEEcCCC-ceEEE
Confidence 2 1111 11122222 7789 99877655421 1234689998865 55555
No 41
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.85 E-value=3.8e-21 Score=205.71 Aligned_cols=241 Identities=17% Similarity=0.182 Sum_probs=156.0
Q ss_pred EEEEEEEe-CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEE
Q 002164 639 KELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (958)
Q Consensus 639 ~~~~~~~~-~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~ 717 (958)
.+.+++.+ ..|..+.+.+|+|++++. +++|+||++||+...... +... ....+.++++||+|+.
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~~~---~~~p~vv~lHG~~~~~~~-----------~~~~-~~~~~~~~~~g~~vv~ 80 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKAET---GKCPALYWLSGLTCTEQN-----------FISK-SGYHQSASEHGLVVIA 80 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGGT---SCEEEEEEECCTTCCSHH-----------HHHH-SCCHHHHHHHTCEEEE
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCCCC---CCCCEEEEEcCCCCCccc-----------hhhc-chHHHHhhcCCeEEEE
Confidence 34455553 478899999999987543 359999999997533211 1000 0114567889999999
Q ss_pred cCC--CCCCCCC----------Ccc---cchhhHH---HHHH-HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH
Q 002164 718 GPT--TPIIGEG----------DEE---ANDRFVE---QLVA-CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA 778 (958)
Q Consensus 718 ~~~--~~~~G~G----------~~~---~~~~~~~---~~~~-D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 778 (958)
++. ++..+.| .+. ....... .... ++.++++++.++..+|++||+|+|+|+||++|+.++.
T Consensus 81 ~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~ 160 (282)
T 3fcx_A 81 PDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICAL 160 (282)
T ss_dssp ECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eccccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHH
Confidence 776 3332211 110 0111111 1122 2335555666555588899999999999999999999
Q ss_pred hCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCC---CCCCEEEEeeCCCCCCCCChHH--HHH
Q 002164 779 HAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANK---LKKPILLVHGEEDNNSGTLTMQ--SDR 853 (958)
Q Consensus 779 ~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~---~~~P~Lii~G~~D~~v~~~~~~--~~~ 853 (958)
++|++|+++|+.+|+++....++........+......+...+|...+.+ +++|+|++||++|..+| ..+ +++
T Consensus 161 ~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~ 238 (282)
T 3fcx_A 161 KNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLL--DGQLLPDN 238 (282)
T ss_dssp TSTTTSSCEEEESCCCCGGGSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHH--TTSSCHHH
T ss_pred hCcccceEEEEeCCccCcccCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccc--cchhhHHH
Confidence 99999999999999876432221100000000111122334455444444 47899999999999986 444 668
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 854 FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 854 ~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
++++|+..|.++++.++|+++|.+. .....+.+.++|+.++|.
T Consensus 239 ~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 239 FIAACTEKKIPVVFRLQEDYDHSYY---FIATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCceEEEECCCCCcCHH---HHHhhhHHHHHHHHHhhc
Confidence 9999999999999999999999873 234567788899998874
No 42
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.85 E-value=9.7e-21 Score=196.52 Aligned_cols=207 Identities=15% Similarity=0.102 Sum_probs=157.8
Q ss_pred EEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcC
Q 002164 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (958)
Q Consensus 640 ~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~ 719 (958)
+.+++++.+|..+.++++.|++ ++.|+||++||..... ......+..|+++||.|++++
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~------~~~p~vv~~hG~~~~~---------------~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK------APAPVIVIAQDIFGVN---------------AFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS------CSEEEEEEECCTTBSC---------------HHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEecCCCCeEEEEEECCCC------CCCCEEEEEcCCCCCC---------------HHHHHHHHHHHhCCcEEEecc
Confidence 3467888899999999999863 2489999999963110 112245667888999999955
Q ss_pred CCCCCCCCCccc-----------------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 002164 720 TTPIIGEGDEEA-----------------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (958)
Q Consensus 720 ~~~~~G~G~~~~-----------------~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 782 (958)
+ +|+|.+.. ..........|+.++++++.++..++ ++++++|||+||.+++.++.+.|
T Consensus 63 ~---~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~- 137 (236)
T 1zi8_A 63 L---YARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY- 137 (236)
T ss_dssp G---GGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC-
T ss_pred c---cccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC-
Confidence 4 45544321 11123556889999999998886555 69999999999999999999997
Q ss_pred ceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCC
Q 002164 783 LFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG 862 (958)
Q Consensus 783 ~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g 862 (958)
++++++.+|.... ++...+.++++|+|+++|++|..+| ++.+.++++.++..+
T Consensus 138 -~~~~v~~~~~~~~------------------------~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~ 190 (236)
T 1zi8_A 138 -VDRAVGYYGVGLE------------------------KQLNKVPEVKHPALFHMGGQDHFVP--APSRQLITEGFGANP 190 (236)
T ss_dssp -SSEEEEESCSSGG------------------------GCGGGGGGCCSCEEEEEETTCTTSC--HHHHHHHHHHHTTCT
T ss_pred -ccEEEEecCcccc------------------------cchhhhhhcCCCEEEEecCCCCCCC--HHHHHHHHHHHHhCC
Confidence 8999888774210 1234456678999999999999998 899999999998766
Q ss_pred CcEEEEEeCCCCccCCCc-------ccHHHHHHHHHHHHHHhhcc
Q 002164 863 ALCRLVILPFESHGYAAR-------ESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 863 ~~~~~~~~p~~~H~~~~~-------~~~~~~~~~i~~fl~~~l~~ 900 (958)
+++++++++++|.+... +....+.+.+.+||.+++..
T Consensus 191 -~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 191 -LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp -TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred -CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 89999999999987543 22457788999999998854
No 43
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.85 E-value=6e-21 Score=204.01 Aligned_cols=239 Identities=20% Similarity=0.194 Sum_probs=159.2
Q ss_pred cEEEEEEEe-CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 638 QKELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 638 ~~~~~~~~~-~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
..+.+++.+ .+|..+.+.+|+|+++++. +++|+||++||++..... +.... .....++++||+|+
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~--~~~p~vv~lHG~~~~~~~-----------~~~~~-~~~~~~~~~g~~vv 81 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQASTG--AKVPVLYWLSGLTCSDEN-----------FMQKA-GAQRLAAELGIAIV 81 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGTT--CCEEEEEEECCTTCCSSH-----------HHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCCCC--CCccEEEEecCCCCChhH-----------Hhhcc-cHHHHHhhCCeEEE
Confidence 345666665 4789999999999987533 359999999997532211 10000 12345667899999
Q ss_pred EcCCCCCC-----------CCCCcccc----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 002164 717 GGPTTPII-----------GEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (958)
Q Consensus 717 ~~~~~~~~-----------G~G~~~~~----------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 775 (958)
.++.++.. |.|.++.. ..+.....+ ++++++.++..+ +++++|+|||+||++|+.
T Consensus 82 ~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~ 157 (280)
T 3i6y_A 82 APDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVN---ELPELIESMFPV-SDKRAIAGHSMGGHGALT 157 (280)
T ss_dssp EECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHT---HHHHHHHHHSSE-EEEEEEEEETHHHHHHHH
T ss_pred EeCCcccccccCcccccccccCccccccccCCCccchhhHHHHHHH---HHHHHHHHhCCC-CCCeEEEEECHHHHHHHH
Confidence 97653210 11111110 011222233 344455555434 689999999999999999
Q ss_pred HHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCC--CCEEEEeeCCCCCCCCChHH-HH
Q 002164 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQ-SD 852 (958)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~~-~~ 852 (958)
++.++|++|+++|+.+|.++....++........+......+...+|...+.+++ +|+|++||++|..++ ... ++
T Consensus 158 ~a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~--~~~~~~ 235 (280)
T 3i6y_A 158 IALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLA--EQLKPE 235 (280)
T ss_dssp HHHHCTTTCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHH--HHTCHH
T ss_pred HHHhCCccccEEEEeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCcccc--chhhHH
Confidence 9999999999999999987643222111000001111223344556666666555 899999999999986 544 88
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 853 RFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 853 ~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
+++++|+..|+++++.++|+++|.+. .....+.++++|+.++|.
T Consensus 236 ~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 236 VLEAAASSNNYPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 99999999999999999999999862 345667888999999874
No 44
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.85 E-value=1.6e-20 Score=207.41 Aligned_cols=231 Identities=13% Similarity=0.099 Sum_probs=166.3
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcE
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (958)
..+..+.+++.+.+|..++++++.|++ .++.|+||++||++.... .+. ....++++||.
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~-----~~~~p~vv~~HG~g~~~~-----------~~~-----~~~~~~~~G~~ 136 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSNSG-----------DWN-----DKLNYVAAGFT 136 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC-----SSCEEEEEEECCTTCCSC-----------CSG-----GGHHHHTTTCE
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC-----CCCcCEEEEECCCCCCCC-----------Chh-----hhhHHHhCCcE
Confidence 345678899999999999999999975 235899999999753221 111 12267899999
Q ss_pred EEEcCCCCCCCCCCc-------------------ccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 002164 715 ILGGPTTPIIGEGDE-------------------EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (958)
Q Consensus 715 vl~~~~~~~~G~G~~-------------------~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 775 (958)
|+++++++..+.+.. .....++...+.|+.++++++..+..+|+++|+|+|+|+||.+++.
T Consensus 137 v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~ 216 (346)
T 3fcy_A 137 VVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLA 216 (346)
T ss_dssp EEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred EEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHH
Confidence 999666544322211 1112235577899999999999998889999999999999999999
Q ss_pred HHHhCCCceeEEEEeccCCCCCCCCCCccccc-----------------chhhhcHHHHHhcCcccccCCCCCCEEEEee
Q 002164 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQNED-----------------RTLWEATSTYVEMSPFMSANKLKKPILLVHG 838 (958)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G 838 (958)
++.+.|+ ++++|+.+|..+.....+...... .........+...++...+.++++|+|+++|
T Consensus 217 ~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G 295 (346)
T 3fcy_A 217 CAALEPR-VRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVG 295 (346)
T ss_dssp HHHHSTT-CCEEEEESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEE
T ss_pred HHHhCcc-ccEEEECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEee
Confidence 9999987 999999998654211000000000 0000111223344566677889999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
++|..+| +..+.+++++++. +++++++|+++|.+. ..+.+.+.+||.+.
T Consensus 296 ~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 296 LMDQVCP--PSTVFAAYNNIQS---KKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp TTCSSSC--HHHHHHHHTTCCS---SEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred CCCCcCC--HHHHHHHHHhcCC---CcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 9999998 8888888877654 689999999999985 34577889998763
No 45
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.85 E-value=2.8e-20 Score=202.55 Aligned_cols=229 Identities=15% Similarity=0.142 Sum_probs=164.9
Q ss_pred CCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCc-CcccCCcccCCCCCCCCcCcHHHHHHHHCCcE
Q 002164 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFK-SKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (958)
Q Consensus 636 ~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (958)
.+..+.+++++.+|..+.++++.|++ .++.|+||++||++.. . ........|+++||.
T Consensus 53 ~~~~~~~~~~~~~g~~i~~~~~~P~~-----~~~~p~vv~~HG~~~~~~----------------~~~~~~~~l~~~g~~ 111 (318)
T 1l7a_A 53 GVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNASYD----------------GEIHEMVNWALHGYA 111 (318)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCCSG----------------GGHHHHHHHHHTTCE
T ss_pred CeEEEEEEEEccCCCEEEEEEEeeCC-----CCCccEEEEEcCCCCCCC----------------CCcccccchhhCCcE
Confidence 44578889998899999999999975 2358999999997422 1 011223477889999
Q ss_pred EEEcCCCCCCCCCCcccc--------------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHH
Q 002164 715 ILGGPTTPIIGEGDEEAN--------------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTA 774 (958)
Q Consensus 715 vl~~~~~~~~G~G~~~~~--------------------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~ 774 (958)
|++++++ |+|.+... ..++...+.|+.++++|+.++..+|+++|+++|||+||.+++
T Consensus 112 v~~~d~r---g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~ 188 (318)
T 1l7a_A 112 TFGMLVR---GQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTI 188 (318)
T ss_dssp EEEECCT---TTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred EEEecCC---CCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHH
Confidence 9996665 44443221 112467899999999999999888889999999999999999
Q ss_pred HHHHhCCCceeEEEEeccCCCCCCCC------CCcccccch------hhhc---HHHHHhcCcccccCCCCCCEEEEeeC
Q 002164 775 NLLAHAPHLFCCGIARSGAYNRTLTP------FGFQNEDRT------LWEA---TSTYVEMSPFMSANKLKKPILLVHGE 839 (958)
Q Consensus 775 ~~a~~~p~~~~a~v~~~~~~~~~~~~------~~~~~~~~~------~~~~---~~~~~~~sp~~~~~~~~~P~Lii~G~ 839 (958)
.++.++|+ ++++|+.+|........ ..+...... .... .......++...+.++++|+|++||+
T Consensus 189 ~~a~~~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~ 267 (318)
T 1l7a_A 189 AAAALSDI-PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGL 267 (318)
T ss_dssp HHHHHCSC-CSEEEEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEET
T ss_pred HHhccCCC-ccEEEecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEecc
Confidence 99999976 77777777754311000 000000000 0000 11222345666778889999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
+|..+| ++++.+++++++. +++++++|+++|... .+..+.+.+||.++++
T Consensus 268 ~D~~~~--~~~~~~~~~~l~~---~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 268 IDKVTP--PSTVFAAYNHLET---KKELKVYRYFGHEYI-----PAFQTEKLAFFKQILK 317 (318)
T ss_dssp TCSSSC--HHHHHHHHHHCCS---SEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHC
T ss_pred CCCCCC--cccHHHHHhhcCC---CeeEEEccCCCCCCc-----chhHHHHHHHHHHHhC
Confidence 999998 8999888887754 489999999999842 3567889999999885
No 46
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.85 E-value=5.8e-20 Score=188.68 Aligned_cols=208 Identities=19% Similarity=0.172 Sum_probs=160.5
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
+..+.++++. +|.++.++++.|++ +.|+||++||+.... ..+ .....+..|+++||.|+
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~~~~-----------~~~--~~~~~~~~l~~~G~~v~ 68 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSGSSR-----------YSP--RNRYVAEVLQQAGLATL 68 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTTCCT-----------TCH--HHHHHHHHHHHHTCEEE
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCCCCC-----------Ccc--chHHHHHHHHHCCCEEE
Confidence 5577888887 99999999999864 379999999964211 100 11235667888999999
Q ss_pred EcCCCCCCCCCCcccch------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEe
Q 002164 717 GGPTTPIIGEGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIAR 790 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~~------~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~ 790 (958)
.+ +.+|+|.+.... .......+|+.++++++..++.+|+++++++|||+||.+++.++.++|++++++|+.
T Consensus 69 ~~---d~~g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~ 145 (223)
T 2o2g_A 69 LI---DLLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSR 145 (223)
T ss_dssp EE---CSSCHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEE
T ss_pred EE---cCCCcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEe
Confidence 94 455666553321 334667899999999999998899999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEe
Q 002164 791 SGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVIL 870 (958)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~ 870 (958)
+|..+.. ...+.++++|+|+++|++|..+| .. . .+.++..+.+++++++
T Consensus 146 ~~~~~~~-------------------------~~~~~~~~~P~l~i~g~~D~~~~--~~-~---~~~~~~~~~~~~~~~~ 194 (223)
T 2o2g_A 146 GGRPDLA-------------------------PSALPHVKAPTLLIVGGYDLPVI--AM-N---EDALEQLQTSKRLVII 194 (223)
T ss_dssp SCCGGGC-------------------------TTTGGGCCSCEEEEEETTCHHHH--HH-H---HHHHHHCCSSEEEEEE
T ss_pred CCCCCcC-------------------------HHHHhcCCCCEEEEEccccCCCC--HH-H---HHHHHhhCCCeEEEEe
Confidence 8864310 12345578999999999998875 33 3 3445555678999999
Q ss_pred CCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 871 PFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 871 p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
++++|.+...+....+.+.+.+||.++|+
T Consensus 195 ~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 195 PRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp TTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred CCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 99999987666678889999999999873
No 47
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.85 E-value=1.6e-20 Score=204.59 Aligned_cols=222 Identities=16% Similarity=0.056 Sum_probs=155.6
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCCCCCCCc
Q 002164 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDE 729 (958)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~~G~G~~ 729 (958)
.+.+++|.|++ .++.|+||++|||++..++. .. ....+..|++ .||+|+.++++...++
T Consensus 66 ~i~~~~~~p~~-----~~~~p~vv~~HGGg~~~g~~--------~~----~~~~~~~la~~~g~~vv~~dyr~~p~~--- 125 (322)
T 3fak_A 66 GCAAEWVRAPG-----CQAGKAILYLHGGGYVMGSI--------NT----HRSMVGEISRASQAAALLLDYRLAPEH--- 125 (322)
T ss_dssp TEEEEEEECTT-----CCTTCEEEEECCSTTTSCCH--------HH----HHHHHHHHHHHHTSEEEEECCCCTTTS---
T ss_pred CeEEEEEeCCC-----CCCccEEEEEcCCccccCCh--------HH----HHHHHHHHHHhcCCEEEEEeCCCCCCC---
Confidence 38889999975 23489999999986432211 11 1133455665 6999999777643321
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEeccCCCCCCCCCCcc-
Q 002164 730 EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQ- 804 (958)
Q Consensus 730 ~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~~~~~~~~~~~- 804 (958)
.++..++|+.++++|+.++ .+|++||+|+|+|+||++|+.++.+.+++ ++++|+++|+++.......+.
T Consensus 126 -----~~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 199 (322)
T 3fak_A 126 -----PFPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKT 199 (322)
T ss_dssp -----CTTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHH
Confidence 2356779999999999998 67999999999999999999999876553 999999999887543211110
Q ss_pred --------ccc--chhhhcH-----HHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEE
Q 002164 805 --------NED--RTLWEAT-----STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (958)
Q Consensus 805 --------~~~--~~~~~~~-----~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (958)
... ...+... ......+|+...-+...|+||+||+.|.. ..++.+++++|+..|+++++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~----~~~~~~~~~~l~~~g~~~~~~~ 275 (322)
T 3fak_A 200 RAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVL----LDDSIKLDAKAKADGVKSTLEI 275 (322)
T ss_dssp TTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEE
T ss_pred hCccCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCcc----HHHHHHHHHHHHHcCCCEEEEE
Confidence 000 0000000 00112344432222335999999999976 4688999999999999999999
Q ss_pred eCCCCccCCC----cccHHHHHHHHHHHHHHhhccCC
Q 002164 870 LPFESHGYAA----RESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 870 ~p~~~H~~~~----~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
||+++|.+.. .+...++++.+.+||.++|....
T Consensus 276 ~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3fak_A 276 WDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAALA 312 (322)
T ss_dssp ETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC--
T ss_pred eCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcch
Confidence 9999998742 34467889999999999997543
No 48
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.85 E-value=5.9e-21 Score=204.43 Aligned_cols=239 Identities=17% Similarity=0.119 Sum_probs=166.1
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEecCCCC-CCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCc
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYLPPGYD-PSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~P~~~~-~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (958)
...+.+.+.+...+|..+...+| |+... ....++.|+||++||+++..+. .......+..|+++||
T Consensus 15 ~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~------------~~~~~~~~~~l~~~G~ 81 (283)
T 3bjr_A 15 LYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIP------------VAQAESLAMAFAGHGY 81 (283)
T ss_dssp --CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCC------------HHHHHHHHHHHHTTTC
T ss_pred cCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCC------------ccccHHHHHHHHhCCc
Confidence 33445678888889988888999 76421 0012358999999997532111 0011234567888999
Q ss_pred EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc-------
Q 002164 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL------- 783 (958)
Q Consensus 714 ~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~------- 783 (958)
.|++++++ |.|.+. ........|+.++++|+.++. .+|+++|+|+|||+||.+|+.++.+.|++
T Consensus 82 ~v~~~d~~---g~~~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 155 (283)
T 3bjr_A 82 QAFYLEYT---LLTDQQ---PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNV 155 (283)
T ss_dssp EEEEEECC---CTTTCS---SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTC
T ss_pred EEEEEecc---CCCccc---cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCC
Confidence 99996654 444431 012355678899999998863 47788999999999999999999999877
Q ss_pred ------eeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHH
Q 002164 784 ------FCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (958)
Q Consensus 784 ------~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~ 857 (958)
++++|+.+|..+.... +.............+...++...+.++++|+|++||++|..+| +.++.++++.
T Consensus 156 ~~~~~~~~~~v~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p--~~~~~~~~~~ 230 (283)
T 3bjr_A 156 TPAMLKPNNVVLGYPVISPLLG---FPKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVP--ATNTLAYATA 230 (283)
T ss_dssp CHHHHCCSSEEEESCCCCTTSB---C--------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSC--THHHHHHHHH
T ss_pred CcCCCCccEEEEcCCccccccc---cccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCC--hHHHHHHHHH
Confidence 8999999998763211 1000000000001233456777778889999999999999999 9999999999
Q ss_pred HHhCCCcEEEEEeCCCCccCCCcc------------cHHHHHHHHHHHHHHh
Q 002164 858 LKGHGALCRLVILPFESHGYAARE------------SIMHVLWETDRWLQKY 897 (958)
Q Consensus 858 l~~~g~~~~~~~~p~~~H~~~~~~------------~~~~~~~~i~~fl~~~ 897 (958)
++..+.+++++++++++|.+.... ....+.+.+.+||+++
T Consensus 231 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 231 LATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999999999999999764221 1246778888888764
No 49
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.85 E-value=8e-20 Score=191.77 Aligned_cols=227 Identities=19% Similarity=0.169 Sum_probs=159.6
Q ss_pred EEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCC
Q 002164 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (958)
Q Consensus 642 ~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~ 721 (958)
+++.. +|.+++++++.|++. .++.|+||++||.+.. .........+..|+++||.|++ +
T Consensus 4 ~~~~~-~g~~l~~~~~~p~~~----~~~~p~vvl~HG~~~~-------------~~~~~~~~~~~~l~~~g~~vi~---~ 62 (251)
T 2wtm_A 4 MYIDC-DGIKLNAYLDMPKNN----PEKCPLCIIIHGFTGH-------------SEERHIVAVQETLNEIGVATLR---A 62 (251)
T ss_dssp EEEEE-TTEEEEEEEECCTTC----CSSEEEEEEECCTTCC-------------TTSHHHHHHHHHHHHTTCEEEE---E
T ss_pred eEEec-CCcEEEEEEEccCCC----CCCCCEEEEEcCCCcc-------------cccccHHHHHHHHHHCCCEEEE---e
Confidence 45554 899999999998752 1247999999996321 0011112345678889999999 5
Q ss_pred CCCCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC-
Q 002164 722 PIIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL- 798 (958)
Q Consensus 722 ~~~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~- 798 (958)
|.+|+|.+.... .......+|+.++++++.++..+ ++++++||||||.+++.++.++|++++++|+.+|......
T Consensus 63 D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (251)
T 2wtm_A 63 DMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI 140 (251)
T ss_dssp CCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH
T ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH
Confidence 666888775432 22456788999999999776444 4899999999999999999999999999999988643100
Q ss_pred -----------CCCCcccccchhhh---c---HHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhC
Q 002164 799 -----------TPFGFQNEDRTLWE---A---TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGH 861 (958)
Q Consensus 799 -----------~~~~~~~~~~~~~~---~---~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~ 861 (958)
.............. . .......++...+.++++|+|++||++|..+| ++.+.++++.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~--~~~~~~~~~~~~-- 216 (251)
T 2wtm_A 141 ARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVP--YEASVAFSKQYK-- 216 (251)
T ss_dssp HHHTEETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSC--HHHHHHHHHHSS--
T ss_pred HhhhhhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcC--hHHHHHHHHhCC--
Confidence 00000000000000 0 01111223334556789999999999999998 888888877663
Q ss_pred CCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 862 GALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 862 g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
.++++++|+++|.+ .+....+.+.+.+||.+++.
T Consensus 217 --~~~~~~~~~~gH~~--~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 217 --NCKLVTIPGDTHCY--DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp --SEEEEEETTCCTTC--TTTHHHHHHHHHHHHHHHHC
T ss_pred --CcEEEEECCCCccc--chhHHHHHHHHHHHHHHhcc
Confidence 57999999999998 67788899999999998874
No 50
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.84 E-value=3.1e-20 Score=219.40 Aligned_cols=248 Identities=16% Similarity=0.204 Sum_probs=173.2
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHH---HHHHHCCc
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV---LLWLARGF 713 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~la~~G~ 713 (958)
+..+.++|++.||.+|++++|+|++. +++|+||++||..... ...+.....+..... +.|+++||
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~-----~~~P~vl~~hgyg~~~-------~~~~~~~~~~~~~~~~~~~~la~~Gy 90 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA-----KNAPIVLTRTPYDASG-------RTERLASPHMKDLLSAGDDVFVEGGY 90 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHH-------HTCSSCCSSHHHHSCGGGHHHHHTTC
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC-----CCeeEEEEEcCCCCcc-------ccccccccccccccchhHHHHHhCCe
Confidence 45678899999999999999999762 3589999999742110 000000000000011 68999999
Q ss_pred EEEEcCCCCCCCCCCcccch-----hhHH---HHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCCce
Q 002164 714 AILGGPTTPIIGEGDEEAND-----RFVE---QLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPHLF 784 (958)
Q Consensus 714 ~vl~~~~~~~~G~G~~~~~~-----~~~~---~~~~D~~~av~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~ 784 (958)
+|+.+|++|..+.+...... .+.. ..++|+.++++||.++ +++| .||+++|+||||++++++++..|+++
T Consensus 91 ~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l 169 (615)
T 1mpx_A 91 IRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPAL 169 (615)
T ss_dssp EEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTE
T ss_pred EEEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCce
Confidence 99997666554433222111 0122 6789999999999999 7877 59999999999999999999888999
Q ss_pred eEEEEeccCCCCCC-CCC---Cc--------c--------------c--cc----------------------chhhhc-
Q 002164 785 CCGIARSGAYNRTL-TPF---GF--------Q--------------N--ED----------------------RTLWEA- 813 (958)
Q Consensus 785 ~a~v~~~~~~~~~~-~~~---~~--------~--------------~--~~----------------------~~~~~~- 813 (958)
+|+|+.+++.+... ..+ +. . . .. ...|++
T Consensus 170 ~a~v~~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (615)
T 1mpx_A 170 KVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKL 249 (615)
T ss_dssp EEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHH
T ss_pred EEEEecCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHH
Confidence 99999999988432 111 00 0 0 00 000110
Q ss_pred ------HHHHHhcCcccccCC--CCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCc---EEEEEeCCCCccCCC---
Q 002164 814 ------TSTYVEMSPFMSANK--LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL---CRLVILPFESHGYAA--- 879 (958)
Q Consensus 814 ------~~~~~~~sp~~~~~~--~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~---~~~~~~p~~~H~~~~--- 879 (958)
.+.|.+.||+.++++ |++|+|++||..|.+ + ..++.++|++|+..|++ +++++.|. +|....
T Consensus 250 ~~~~~~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~--~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~ 325 (615)
T 1mpx_A 250 TEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-D--MWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDG 325 (615)
T ss_dssp HHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-C--SSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCC
T ss_pred HhCCCcChhhhhcChhhhhhccCCCCCEEEeecccCcc-c--cccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccc
Confidence 133456788889999 999999999999997 7 78999999999998754 89999998 686511
Q ss_pred ---------ccc-HHHHHHHHHHHHHHhhccC
Q 002164 880 ---------RES-IMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 880 ---------~~~-~~~~~~~i~~fl~~~l~~~ 901 (958)
.+. .....+.+++||++||++.
T Consensus 326 ~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 326 SALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp SEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 111 1223577899999999865
No 51
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.84 E-value=1.6e-20 Score=200.70 Aligned_cols=239 Identities=18% Similarity=0.193 Sum_probs=158.4
Q ss_pred cEEEEEEEe-CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 638 QKELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 638 ~~~~~~~~~-~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
..+.+++.+ ..|..+.+.+|+|+++++.+ ++|+||++||+...... +... ......++++||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~P~vv~lHG~~~~~~~-----------~~~~-~~~~~~~~~~g~~vv 79 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGASESN--KVPVLYWLSGLTCTDEN-----------FMQK-AGAFKKAAELGIAIV 79 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCBTTB--CEEEEEEECCTTCCSHH-----------HHHH-SCCHHHHHHHTCEEE
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCCCCC--CcCEEEEeCCCCCChhh-----------hhcc-hhHHHHHhhCCeEEE
Confidence 345666765 47889999999999876433 59999999997532211 1000 012345667899999
Q ss_pred EcCCCCC--C---------CCCCcccc----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHH
Q 002164 717 GGPTTPI--I---------GEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTAN 775 (958)
Q Consensus 717 ~~~~~~~--~---------G~G~~~~~----------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 775 (958)
.++.++. . |.|.++.. ..+.....++ ++.++.++..+ +++++|+|+|+||++|+.
T Consensus 80 ~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~ 155 (280)
T 3ls2_A 80 APDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNE---LPALIEQHFPV-TSTKAISGHSMGGHGALM 155 (280)
T ss_dssp ECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTH---HHHHHHHHSSE-EEEEEEEEBTHHHHHHHH
T ss_pred EeCCcccccccccccccccccCCccccccccccccccccHHHHHHHH---HHHHHHhhCCC-CCCeEEEEECHHHHHHHH
Confidence 9764311 0 11211110 0122233333 33444444333 479999999999999999
Q ss_pred HHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCC----CCEEEEeeCCCCCCCCChHH-
Q 002164 776 LLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLK----KPILLVHGEEDNNSGTLTMQ- 850 (958)
Q Consensus 776 ~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~----~P~Lii~G~~D~~v~~~~~~- 850 (958)
++.++|++|+++++.+|+++....++........+......+...+|...+.+++ +|+|++||++|..++ ...
T Consensus 156 ~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~ 233 (280)
T 3ls2_A 156 IALKNPQDYVSASAFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLD--EQLK 233 (280)
T ss_dssp HHHHSTTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCC--CCCC
T ss_pred HHHhCchhheEEEEecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccC--Cchh
Confidence 9999999999999999987643322111000001111223344556666665554 599999999999997 644
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 851 SDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 851 ~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
+++++++|+..|+++++.++|+++|.+. .....+..+++|+.++|.
T Consensus 234 ~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 234 PQNLVAVAKQKDYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHhc
Confidence 8899999999999999999999999863 234567788999999874
No 52
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.84 E-value=8.1e-20 Score=185.61 Aligned_cols=203 Identities=19% Similarity=0.154 Sum_probs=150.3
Q ss_pred cEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEE
Q 002164 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (958)
Q Consensus 638 ~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~ 717 (958)
..+.+++++.+| +++++++.|++ .++.|+||++||+++..+. .........+..|+++||.|+.
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~g~~v~~ 68 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG-----IEKSVTGIICHPHPLHGGT----------MNNKVVTTLAKALDELGLKTVR 68 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS-----CCCSEEEEEECSCGGGTCC----------TTCHHHHHHHHHHHHTTCEEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC-----CCCCCEEEEEcCCCCCCCc----------cCCchHHHHHHHHHHCCCEEEE
Confidence 356788999999 99999999864 2247999999995422111 0001112456678899999999
Q ss_pred cCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCC
Q 002164 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (958)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~ 797 (958)
.+.+|+|.+...........+|+.++++++.++ .+.++++++|||+||.+++.++ .+| +++++|+.+|..+.
T Consensus 69 ---~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~- 140 (208)
T 3trd_A 69 ---FNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY- 140 (208)
T ss_dssp ---ECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS-
T ss_pred ---EecCCCCCCCCCccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc-
Confidence 455577776554333456789999999999987 4457999999999999999999 665 89999999887521
Q ss_pred CCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 002164 798 LTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY 877 (958)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~ 877 (958)
+ ....+..+++|+|++||++|..+| ++.+++++++++.. ++++++++++|.+
T Consensus 141 -------------~----------~~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~H~~ 192 (208)
T 3trd_A 141 -------------E----------GFASLTQMASPWLIVQGDQDEVVP--FEQVKAFVNQISSP---VEFVVMSGASHFF 192 (208)
T ss_dssp -------------G----------GGTTCCSCCSCEEEEEETTCSSSC--HHHHHHHHHHSSSC---CEEEEETTCCSSC
T ss_pred -------------C----------CchhhhhcCCCEEEEECCCCCCCC--HHHHHHHHHHccCc---eEEEEeCCCCCcc
Confidence 0 112344558999999999999999 88888888876553 7999999999998
Q ss_pred CCcccHHHHHHHHHHHH
Q 002164 878 AARESIMHVLWETDRWL 894 (958)
Q Consensus 878 ~~~~~~~~~~~~i~~fl 894 (958)
... ..++.+.+.+||
T Consensus 193 ~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 193 HGR--LIELRELLVRNL 207 (208)
T ss_dssp TTC--HHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHHHHh
Confidence 532 356666666665
No 53
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.84 E-value=1.3e-20 Score=201.06 Aligned_cols=235 Identities=14% Similarity=0.131 Sum_probs=157.3
Q ss_pred EEEEEEEe-CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEE
Q 002164 639 KELIKYQR-KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (958)
Q Consensus 639 ~~~~~~~~-~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~ 717 (958)
.+.+++.+ ..|..+.+.+|+|++++ ..++|+||++||+...... +.... .....+.+.||+|+.
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~~~-----------~~~~~-~~~~~~~~~g~~vv~ 79 (278)
T 3e4d_A 15 QGVFSHQSETLKSEMTFAVYVPPKAI---HEPCPVVWYLSGLTCTHAN-----------VMEKG-EYRRMASELGLVVVC 79 (278)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCSHH-----------HHHHS-CCHHHHHHHTCEEEE
T ss_pred EEEEEEeccccCCcceEEEEcCCCCC---CCCCCEEEEEcCCCCCccc-----------hhhcc-cHHHHHhhCCeEEEe
Confidence 45566654 47889999999998754 2359999999997432211 10000 023345567999999
Q ss_pred cCCCCCCCCCCcccch-------------------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHH
Q 002164 718 GPTTPIIGEGDEEAND-------------------------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFM 772 (958)
Q Consensus 718 ~~~~~~~G~G~~~~~~-------------------------~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~ 772 (958)
++.+ |+|.+.... .+..... .++++++.++..+|+++++|+|||+||++
T Consensus 80 ~d~~---g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~i~l~G~S~GG~~ 153 (278)
T 3e4d_A 80 PDTS---PRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVT---EELPALIGQHFRADMSRQSIFGHSMGGHG 153 (278)
T ss_dssp CCSS---CCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHH---THHHHHHHHHSCEEEEEEEEEEETHHHHH
T ss_pred cCCc---ccCcccccccccccccCCccccccCCcCcccchhhHHHHHH---HHHHHHHHhhcCCCcCCeEEEEEChHHHH
Confidence 6654 443321110 1111122 24566666665678899999999999999
Q ss_pred HHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCC--CCCEEEEeeCCCCCCCCChHH
Q 002164 773 TANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL--KKPILLVHGEEDNNSGTLTMQ 850 (958)
Q Consensus 773 a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~--~~P~Lii~G~~D~~v~~~~~~ 850 (958)
|+.++.++|++|+++++.+|+++....++........+......+...+|...+.++ .+|+|++||++|..++ ...
T Consensus 154 a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~ 231 (278)
T 3e4d_A 154 AMTIALKNPERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLE--KGL 231 (278)
T ss_dssp HHHHHHHCTTTCSCEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHH--HHT
T ss_pred HHHHHHhCCcccceEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccc--cch
Confidence 999999999999999999998764433322111001111122334445555555444 4599999999999986 432
Q ss_pred -HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 851 -SDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 851 -~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
+.+++++|+..|.++++.++|+++|.+. .....+..+++|+.++|+
T Consensus 232 ~~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 232 RPWLFEEAIKGTDIGLTLRMHDRYDHSYY---FISTFMDDHLKWHAERLG 278 (278)
T ss_dssp CTHHHHHHHTTSSCEEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHcCCCceEEEeCCCCcCHH---HHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999863 234567788899988873
No 54
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=5.9e-19 Score=189.28 Aligned_cols=259 Identities=12% Similarity=0.036 Sum_probs=180.4
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCC-CceeeccCCCCcc
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKARPLFQSPDIY 241 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~-g~~~~lt~~~~~~ 241 (958)
..|++|++.+ +..+.+..+ ...+..++|||||++|++.. ...|+++++++ ++..++.......
T Consensus 22 ~~i~~~d~~~----~~~~~~~~~--~~~v~~~~~spdg~~l~~~~----------~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (297)
T 2ojh_A 22 SSIEIFNIRT----RKMRVVWQT--PELFEAPNWSPDGKYLLLNS----------EGLLYRLSLAGDPSPEKVDTGFATI 85 (297)
T ss_dssp EEEEEEETTT----TEEEEEEEE--SSCCEEEEECTTSSEEEEEE----------TTEEEEEESSSCCSCEECCCTTCCC
T ss_pred eeEEEEeCCC----CceeeeccC--CcceEeeEECCCCCEEEEEc----------CCeEEEEeCCCCCCceEeccccccc
Confidence 5899999855 555555543 34688999999999999964 44899999999 8888876544211
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc
Q 002164 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (958)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 321 (958)
.+..++|+|||+.|++..... + ...+||.+++
T Consensus 86 ---~~~~~~~spdg~~l~~~~~~~--------------------------------------~-------~~~~l~~~~~ 117 (297)
T 2ojh_A 86 ---CNNDHGISPDGALYAISDKVE--------------------------------------F-------GKSAIYLLPS 117 (297)
T ss_dssp ---BCSCCEECTTSSEEEEEECTT--------------------------------------T-------SSCEEEEEET
T ss_pred ---cccceEECCCCCEEEEEEeCC--------------------------------------C-------CcceEEEEEC
Confidence 156899999999999872110 0 2457999998
Q ss_pred -CCeeeecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccC
Q 002164 322 -DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (958)
Q Consensus 322 -~g~~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (958)
++..+.+.....+..+.|||||++|+++..... ...++.++++++..+.+.... ..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~-------------~~ 174 (297)
T 2ojh_A 118 TGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGE-------------GR 174 (297)
T ss_dssp TCCCCEECCSSSSEEEEEECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSS-------------SC
T ss_pred CCCceEEeecCCCccceEECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCC-------------Cc
Confidence 777777776645677899999999998774421 114555556666666655432 23
Q ss_pred cceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccc--
Q 002164 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKT-- 478 (958)
Q Consensus 401 ~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~-- 478 (958)
+..+.|+|||+.|++.... .....||.++. .++..+.+......+..+.|+|||++|++......
T Consensus 175 ~~~~~~s~dg~~l~~~~~~----------~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSR----------TGQMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVF 241 (297)
T ss_dssp EEEEEECTTSSEEEEEECT----------TSSCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCC
T ss_pred cccceECCCCCEEEEEecC----------CCCccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCC
Confidence 4678999999998875221 23446777774 56677777666666778999999999999876532
Q ss_pred -----cceEEEEEcCCCCCCCcEEEec--cCCccccCCCCCCceEeccCCceEEEEee
Q 002164 479 -----RRTRTWVISPGSKDVAPRILFD--RSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (958)
Q Consensus 479 -----~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 529 (958)
....|+++++.++ +...+.. .....+.. ++|+|||++|++...
T Consensus 242 ~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~~~------~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGG--NVETLFDLFGGQGTMNS------PNWSPDGDEFAYVRY 291 (297)
T ss_dssp SCCSSEEEEEEEEETTSC--SCEEEEEEEESTTTSCS------CCBCTTSSEEEEEEE
T ss_pred cccccCceEEEEEecCCC--CceeeeccCCCCccccc------ceECCCCCEEEEEEe
Confidence 2267999999885 3333332 22222222 679999999998874
No 55
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.84 E-value=6.2e-20 Score=217.41 Aligned_cols=251 Identities=14% Similarity=0.146 Sum_probs=175.0
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHH-HHHHHCCcEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWLARGFAI 715 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~G~~v 715 (958)
+..+.++|++.||.+|++++|+|++. +++|+||+.||...... .........|... .... +.|+++||+|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~-----~~~PvIl~~hpyg~~~~---~~~~~~~~~~~~~-~~~~~~~la~~GyaV 105 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA-----RNAPILLTRTPYNAKGR---ANRVPNALTMREV-LPQGDDVFVEGGYIR 105 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHHH---TCSSTTCSSHHHH-SCGGGHHHHHTTCEE
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC-----CCccEEEEECCCCCCcc---ccccccccccccc-ccchHHHHHhCCCEE
Confidence 45678899999999999999999762 35899999997321100 0000000000000 0012 6899999999
Q ss_pred EEcCCCCCCCCCCcccch-----hhH---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 002164 716 LGGPTTPIIGEGDEEAND-----RFV---EQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~~-----~~~---~~~~~D~~~av~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a 786 (958)
+.+|++|..+.+..+... .+. ...++|+.++++||.++ +++| .||+++|+||||++++.++++.|++++|
T Consensus 106 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka 184 (652)
T 2b9v_A 106 VFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKV 184 (652)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEE
T ss_pred EEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEE
Confidence 997776655544332211 112 26889999999999999 8887 5999999999999999999988899999
Q ss_pred EEEeccCCCCCC-CCC---Cccccc----------------------ch------------------------hhhc---
Q 002164 787 GIARSGAYNRTL-TPF---GFQNED----------------------RT------------------------LWEA--- 813 (958)
Q Consensus 787 ~v~~~~~~~~~~-~~~---~~~~~~----------------------~~------------------------~~~~--- 813 (958)
+|+.+++.|+.. ..+ +..... .. .|.+
T Consensus 185 ~v~~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (652)
T 2b9v_A 185 AAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHA 264 (652)
T ss_dssp EEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHH
T ss_pred EEecccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHh
Confidence 999999988542 111 000000 00 0110
Q ss_pred ----HHHHHhcCcccccCC--CCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCC--CcEEEEEeCCCCccCCC------
Q 002164 814 ----TSTYVEMSPFMSANK--LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG--ALCRLVILPFESHGYAA------ 879 (958)
Q Consensus 814 ----~~~~~~~sp~~~~~~--~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g--~~~~~~~~p~~~H~~~~------ 879 (958)
.+.|...+|..++++ |++|+|++||..|.+ + ..++.++|++|+..+ +++++++.|. +|....
T Consensus 265 ~p~~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~--~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~ 340 (652)
T 2b9v_A 265 HPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-D--MWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTL 340 (652)
T ss_dssp CCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-C--SSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEE
T ss_pred CCCCChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-c--cccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccC
Confidence 122455788888999 999999999999997 6 678999999999998 8999999987 797511
Q ss_pred -------cccHHHHHHHHHHHHHHhhccC
Q 002164 880 -------RESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 880 -------~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
........+.+++||++||++.
T Consensus 341 ~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 341 GPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp TTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred CccccccccchhhhhhHHHHHHHHHhCCC
Confidence 1112334678899999999865
No 56
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.83 E-value=2e-19 Score=200.36 Aligned_cols=236 Identities=17% Similarity=0.155 Sum_probs=166.6
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcE
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (958)
..+..+.+++++.||..+.++++.|++ .+ .++.|+||++||+.... .. +....+..|+++||.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~--~~~~p~vv~~hG~~~~~-----------~~---~~~~~~~~l~~~G~~ 126 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKN-RG--GDRLPAIVIGGPFGAVK-----------EQ---SSGLYAQTMAERGFV 126 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESS-CC--SSCEEEEEEECCTTCCT-----------TS---HHHHHHHHHHHTTCE
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCC-CC--CCCCCEEEEECCCCCcc-----------hh---hHHHHHHHHHHCCCE
Confidence 345678899999999999999999986 21 23589999999964211 01 111256778999999
Q ss_pred EEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEec
Q 002164 715 ILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (958)
Q Consensus 715 vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (958)
|+.+++ +|+|.+.... ........|+.++++++.++..+|.++++++|||+||.+++.++.++| .++++|+.+
T Consensus 127 v~~~d~---~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~ 202 (367)
T 2hdw_A 127 TLAFDP---SYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTST 202 (367)
T ss_dssp EEEECC---TTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred EEEECC---CCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEec
Confidence 999554 5666554321 225678899999999999998888899999999999999999999997 599999998
Q ss_pred cCCCC-----CCCC--------------------------CC----cc---ccc--------------------------
Q 002164 792 GAYNR-----TLTP--------------------------FG----FQ---NED-------------------------- 807 (958)
Q Consensus 792 ~~~~~-----~~~~--------------------------~~----~~---~~~-------------------------- 807 (958)
|.... .... +. .. ...
T Consensus 203 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (367)
T 2hdw_A 203 MYDMTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGN 282 (367)
T ss_dssp CCCHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTC
T ss_pred cccccHHHhhhhccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccc
Confidence 64210 0000 00 00 000
Q ss_pred chhhhcHHHHHhcCcccccCCCC-CCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHH
Q 002164 808 RTLWEATSTYVEMSPFMSANKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHV 886 (958)
Q Consensus 808 ~~~~~~~~~~~~~sp~~~~~~~~-~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~ 886 (958)
.........+...++...+.+++ +|+|++||++|. + +.++.+++++ .+.+++++++|+++|..........+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~i~~~PvLii~G~~D~--~--~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~ 355 (367)
T 2hdw_A 283 AWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAH--S--RYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIP 355 (367)
T ss_dssp CCBTTTHHHHTTSCSCTTGGGGTTSCEEEEEETTCT--T--HHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSC
T ss_pred hhhhhhHHHhcCCChhHhHHhhcCCceEEEecCCCC--C--HHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHH
Confidence 00001123344556777788888 999999999998 6 7888888776 56789999999999984211111125
Q ss_pred HHHHHHHHHHhh
Q 002164 887 LWETDRWLQKYC 898 (958)
Q Consensus 887 ~~~i~~fl~~~l 898 (958)
.+.+.+||.++|
T Consensus 356 ~~~i~~fl~~~l 367 (367)
T 2hdw_A 356 FDRIAGFFDEHL 367 (367)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 788999999875
No 57
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.83 E-value=2.7e-19 Score=183.49 Aligned_cols=210 Identities=13% Similarity=0.091 Sum_probs=157.8
Q ss_pred cEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEE
Q 002164 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (958)
Q Consensus 638 ~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~ 717 (958)
..+.+++++.+| .+.++++.|++-.+ .+.|+||++||++...+. .........+..|+++||.|+.
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~~---~~~~~vv~~HG~~~~~~~----------~~~~~~~~~~~~l~~~g~~v~~ 74 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDVA---VQPVTAIVCHPLSTEGGS----------MHNKVVTMAARALRELGITVVR 74 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTSC---CCSEEEEEECSCTTTTCS----------TTCHHHHHHHHHHHTTTCEEEE
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCCc---cccCEEEEECCCCCcCCc----------ccchHHHHHHHHHHHCCCeEEE
Confidence 467889999888 89999999975211 237999999996422111 0001112456678889999999
Q ss_pred cCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCC
Q 002164 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (958)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~ 797 (958)
++ .+|+|.+............|+.++++++.++. +.++++++|||+||.+++.++.+. +++++|+.+|..+..
T Consensus 75 ~d---~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~ 147 (220)
T 2fuk_A 75 FN---FRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW 147 (220)
T ss_dssp EC---CTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB
T ss_pred Ee---cCCCCCCCCCcccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccch
Confidence 44 55777665544444577899999999999884 667999999999999999999987 799999999875431
Q ss_pred CCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 002164 798 LTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGY 877 (958)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~ 877 (958)
. +. .+. ...|+|++||++|..+| ++.+.++++.++ .+++++++++++|.+
T Consensus 148 ~---------------------~~---~~~-~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~H~~ 197 (220)
T 2fuk_A 148 D---------------------FS---DVQ-PPAQWLVIQGDADEIVD--PQAVYDWLETLE---QQPTLVRMPDTSHFF 197 (220)
T ss_dssp C---------------------CT---TCC-CCSSEEEEEETTCSSSC--HHHHHHHHTTCS---SCCEEEEETTCCTTC
T ss_pred h---------------------hh---hcc-cCCcEEEEECCCCcccC--HHHHHHHHHHhC---cCCcEEEeCCCCcee
Confidence 1 01 111 25799999999999998 888888887764 357999999999998
Q ss_pred CCcccHHHHHHHHHHHHHHhhcc
Q 002164 878 AARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 878 ~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
.. ....+.+.+.+||.+++..
T Consensus 198 ~~--~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 198 HR--KLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp TT--CHHHHHHHHHHHHGGGCSS
T ss_pred hh--hHHHHHHHHHHHHHHHhhc
Confidence 64 3567888999999999853
No 58
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=4.9e-19 Score=195.54 Aligned_cols=332 Identities=16% Similarity=0.135 Sum_probs=191.1
Q ss_pred hhHHHhhcCCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCce
Q 002164 100 PEIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE 179 (958)
Q Consensus 100 ~~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~ 179 (958)
..+++++..+.+..++| ||++|||+... .+...+ ....+||++++.+ +..
T Consensus 6 ~~~~~l~~~~~~~~~~~--dG~~i~~~~~~-------------------~~~~~~-----~~~~~l~~~d~~~----~~~ 55 (347)
T 2gop_A 6 WNEKTFAKFAYLSDPRT--KGELVAYVLTK-------------------ANLKDN-----KYENTIVIENLKN----NAR 55 (347)
T ss_dssp ----CCCCSCEEEEEEE--ETTEEEEEEEE-------------------EETTTT-----EEEEEEEEEETTT----CCE
T ss_pred CCcccceeeEEcccceE--CCcEEEEEEee-------------------cCcccC-----CccceEEEEeCCC----Cce
Confidence 34556777777888999 99999998753 111111 1236899999854 555
Q ss_pred eeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEE
Q 002164 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (958)
Q Consensus 180 ~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~ 259 (958)
++| ..+..|.|||||++|||..... +++..+||++++++|+.++++..+. +..++|||||+.|+
T Consensus 56 ~~l------~~~~~~~~SpDg~~la~~~~~~----~~~~~~l~~~~~~~g~~~~l~~~~~------~~~~~wspdg~~l~ 119 (347)
T 2gop_A 56 RFI------ENATMPRISPDGKKIAFMRANE----EKKVSEIWVADLETLSSKKILEAKN------IRSLEWNEDSRKLL 119 (347)
T ss_dssp EEE------ESCEEEEECTTSSEEEEEEEET----TTTEEEEEEEETTTTEEEEEEEESE------EEEEEECTTSSEEE
T ss_pred EEc------ccCCCeEECCCCCEEEEEEecc----CCCcceEEEEECCCCceEEEEcCCC------ccceeECCCCCEEE
Confidence 666 2367899999999999987522 2356789999999999988876443 46899999999999
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCCCcccccccc
Q 002164 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPPAVYTSLDP 339 (958)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~~~~~~ 339 (958)
|........ ... ..+....|
T Consensus 120 ~~~~~~~~~------------------------------------------------------~~~------~~~~~~~~ 139 (347)
T 2gop_A 120 IVGFKRRED------------------------------------------------------EDF------IFEDDVPA 139 (347)
T ss_dssp EEEECCCC---------------------------------------------------------------------CCC
T ss_pred EEEccCCCc------------------------------------------------------CCc------EEEcccce
Confidence 883221000 000 00112223
Q ss_pred CCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEE
Q 002164 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (958)
Q Consensus 340 SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~ 418 (958)
..||..+.... ...|++|++++++. +.++. + .+..+.||||| ++|...
T Consensus 140 ~~~g~~~~~~~--------------~~~l~~~d~~~~~~~~~l~~-~--------------~~~~~~~spdg--~~~~~~ 188 (347)
T 2gop_A 140 WFDDLGFFDGE--------------KTTFWIFDTESEEVIEEFEK-P--------------RFSSGIWHRDK--IVVNVP 188 (347)
T ss_dssp C---------C--------------EEEEEEEETTTTEEEEEEEE-E--------------TTCEEEEETTE--EEEEEE
T ss_pred eecCcccccCc--------------cceEEEEECCCCeEEeeecC-C--------------CcccccCCCCe--EEEEEe
Confidence 33443322111 11566666665555 44443 1 12356677777 554432
Q ss_pred eccCCCccccccc-CCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccc----cceEEEEEcCCCCCC
Q 002164 419 TQDGGDAKVEVTP-RDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKT----RRTRTWVISPGSKDV 493 (958)
Q Consensus 419 ~~~~~~~~~~~~~-~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~----~~~~l~~~~~~~~~~ 493 (958)
.... .. ... ...||+++ +++.+.++.. ..+. .+||||++|+|...... ...+||+++ ++
T Consensus 189 ~~~~-~~---~~~~~~~l~~~d-----~~~~~~l~~~-~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-- 252 (347)
T 2gop_A 189 HREI-IP---QYFKFWDIYIWE-----DGKEEKMFEK-VSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GK-- 252 (347)
T ss_dssp CCCS-SC---CSSCCEEEEEEE-----TTEEEEEEEE-ESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SS--
T ss_pred cccc-cc---cccccccEEEeC-----CCceEEeccC-ccee--eECCCCCEEEEEEccccCCccccceEEEEC--CC--
Confidence 2100 00 001 23567665 3455666554 3333 34999999999875442 236899999 32
Q ss_pred CcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcc
Q 002164 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKE 573 (958)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~ 573 (958)
+...++......+.. .+.|+ || +++..... ...+|| ++ +|+.++++...+.
T Consensus 253 ~~~~l~~~~~~~~~~-----~~~~s-dg--~~~~~~~~------------------~~~~l~-~~--~g~~~~~~~~~~~ 303 (347)
T 2gop_A 253 EVMGILDEVDRGVGQ-----AKIKD-GK--VYFTLFEE------------------GSVNLY-IW--DGEIKPIAKGRHW 303 (347)
T ss_dssp CEEESSTTCCSEEEE-----EEEET-TE--EEEEEEET------------------TEEEEE-EE--SSSEEEEECSSSE
T ss_pred ceEeccccCCcccCC-----ccEEc-Cc--EEEEEecC------------------CcEEEE-Ec--CCceEEEecCCCe
Confidence 334443322111110 15688 88 55544211 123577 77 4677777654322
Q ss_pred cccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeecCCCCC
Q 002164 574 KYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITDFPHPY 631 (958)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~~~~ 631 (958)
+. .++|++ .+++...+...|.++|.++ |+.++||.+|..+
T Consensus 304 -----v~-------~~~~s~---~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n~~~ 343 (347)
T 2gop_A 304 -----IM-------GFDVDE---IVVYLKETATRLRELFTWD---GEEKQLTDYNDPI 343 (347)
T ss_dssp -----EE-------EEEESS---SEEEEEECSSSCCEEEEES---SSEEECCCTTSTT
T ss_pred -----EE-------eeeeeC---cEEEEEcCCCChHHheEeC---CcEEEeccccHhH
Confidence 11 235666 5778888888888999987 7788999887643
No 59
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.82 E-value=4.3e-18 Score=202.08 Aligned_cols=334 Identities=13% Similarity=0.119 Sum_probs=224.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCch--------hcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceee
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLE--------ELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~ 181 (958)
.+..++|||||++|+....+....++ .+..+...+..+.+.+++......+.+..|.+|+... ...+.
T Consensus 223 ~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~----~~~~~ 298 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG----QLLQT 298 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS----CEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC----cEEEE
Confidence 45678999999999987765332222 3344445556677777776555555556799999733 34455
Q ss_pred eccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEE
Q 002164 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (958)
Q Consensus 182 lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~ 261 (958)
+.++ ...+...+|+|||+.|+.... ...|.+|+..+.....+...... +..++|+|||+.|+..
T Consensus 299 ~~~h--~~~v~~~~~~~~~~~l~t~~~---------d~~i~~w~~~~~~~~~~~~~~~~-----v~~~~~s~~g~~l~~~ 362 (577)
T 2ymu_A 299 LTGH--SSSVWGVAFSPDGQTIASASD---------DKTVKLWNRNGQHLQTLTGHSSS-----VWGVAFSPDGQTIASA 362 (577)
T ss_dssp ECCC--SSCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCSSC-----EEEEEECTTSSEEEEE
T ss_pred EecC--CCCeEEEEECCCCCEEEEEeC---------CCeEEEEeCCCCeeEEEeCCCCC-----EEEEEECCCCCEEEEE
Confidence 5443 346888999999999988652 45678888888777666543332 6689999999999876
Q ss_pred ecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCC-eeeecCCC-cccccccc
Q 002164 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIGPP-AVYTSLDP 339 (958)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~l~~~-~~~~~~~~ 339 (958)
. ....+.+++.++ ....+... ..+..++|
T Consensus 363 ~-------------------------------------------------~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~ 393 (577)
T 2ymu_A 363 S-------------------------------------------------DDKTVKLWNRNGQLLQTLTGHSSSVRGVAF 393 (577)
T ss_dssp E-------------------------------------------------TTSEEEEEETTCCEEEEEECCSSCEEEEEE
T ss_pred e-------------------------------------------------CCCEEEEEcCCCCEEEEecCCCCCeEEEEE
Confidence 1 123355666644 34444444 66788999
Q ss_pred CCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEe
Q 002164 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (958)
Q Consensus 340 SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~ 419 (958)
||||++|+..+.+ +.|.+|+..+...+.+..+. ..+..+.|+||++.++..
T Consensus 394 s~dg~~l~~~~~d-------------~~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~d~~~l~~~--- 444 (577)
T 2ymu_A 394 SPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVWGVAFSPDDQTIASA--- 444 (577)
T ss_dssp CTTSSCEEEEETT-------------SEEEEECTTCCEEEEEECCS-------------SCEEEEEECTTSSEEEEE---
T ss_pred CCCCCEEEEEeCC-------------CEEEEEeCCCCEEEEecCCC-------------CCeEEEEECCCCCEEEEE---
Confidence 9999999987633 48999998877666655432 345678999999988763
Q ss_pred ccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002164 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (958)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 499 (958)
+..+.|.+|+. ++.....+......+..++|||||+.|+....... |.+++.++ +.....
T Consensus 445 ----------~~d~~v~~w~~---~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~----i~iw~~~~---~~~~~~ 504 (577)
T 2ymu_A 445 ----------SDDKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT----VKLWNRNG---QLLQTL 504 (577)
T ss_dssp ----------ETTSEEEEEET---TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE----EEEEETTS---CEEEEE
T ss_pred ----------cCCCEEEEEEC---CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE----EEEEcCCC---CEEEEE
Confidence 44567889985 66666666767777888999999999987764432 44445443 333334
Q ss_pred ccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCccccccee
Q 002164 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (958)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~ 579 (958)
......+.. ++|||||++|+....+ ..|++||.++.....+...... +
T Consensus 505 ~~h~~~v~~------l~~s~dg~~l~s~~~d---------------------g~v~lwd~~~~~~~~~~~h~~~-----v 552 (577)
T 2ymu_A 505 TGHSSSVRG------VAFSPDGQTIASASDD---------------------KTVKLWNRNGQLLQTLTGHSSS-----V 552 (577)
T ss_dssp ECCSSCEEE------EEECTTSSCEEEEETT---------------------SEEEEECTTSCEEEEEECCSSC-----E
T ss_pred eCCCCCEEE------EEEcCCCCEEEEEECc---------------------CEEEEEeCCCCEEEEEcCCCCC-----E
Confidence 444444443 7899999998876521 2589999754444444332221 2
Q ss_pred EeecCCCccccccccCCEEEE
Q 002164 580 VALMSDQTEGDLYLNQLKILT 600 (958)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~ 600 (958)
. ..+|+|||+.|+.
T Consensus 553 ~-------~~~fs~dg~~l~s 566 (577)
T 2ymu_A 553 W-------GVAFSPDGQTIAS 566 (577)
T ss_dssp E-------EEEECTTSSCEEE
T ss_pred E-------EEEEcCCCCEEEE
Confidence 2 2578999987664
No 60
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.82 E-value=2.3e-19 Score=191.61 Aligned_cols=202 Identities=17% Similarity=0.141 Sum_probs=143.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAAV 747 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av 747 (958)
.+.||++||... ++..| ...+..|+++||.|++ .|.+|+|.+... .......+.|+.+++
T Consensus 51 ~~~VlllHG~~~-----------s~~~~----~~la~~La~~Gy~Via---~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~ 112 (281)
T 4fbl_A 51 RIGVLVSHGFTG-----------SPQSM----RFLAEGFARAGYTVAT---PRLTGHGTTPAEMAASTASDWTADIVAAM 112 (281)
T ss_dssp SEEEEEECCTTC-----------CGGGG----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CceEEEECCCCC-----------CHHHH----HHHHHHHHHCCCEEEE---ECCCCCCCCCccccCCCHHHHHHHHHHHH
Confidence 466889999431 11111 2457789999999999 666788887542 223456789999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC-----------CCCc-------ccc---
Q 002164 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-----------PFGF-------QNE--- 806 (958)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-----------~~~~-------~~~--- 806 (958)
++|.+.. ++++|+||||||.+++.++.++|++++++|++++....... .... ...
T Consensus 113 ~~l~~~~----~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (281)
T 4fbl_A 113 RWLEERC----DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVK 188 (281)
T ss_dssp HHHHHHC----SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCC
T ss_pred HHHHhCC----CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHH
Confidence 9997753 58999999999999999999999999999999986542210 0000 000
Q ss_pred ----cchhhhcHHHHHhc--CcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc
Q 002164 807 ----DRTLWEATSTYVEM--SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR 880 (958)
Q Consensus 807 ----~~~~~~~~~~~~~~--sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~ 880 (958)
...++.....+... .....+.++++|+|++||++|..+| ++.++++++.+.. .+++++++|++||.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~--~~~~l~~~~~~gH~~~~e 264 (281)
T 4fbl_A 189 ELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVP--PHNGELIYNGIGS--TEKELLWLENSYHVATLD 264 (281)
T ss_dssp CCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSC--THHHHHHHHHCCC--SSEEEEEESSCCSCGGGS
T ss_pred HhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcC--HHHHHHHHHhCCC--CCcEEEEECCCCCcCccc
Confidence 00001111111000 0113457789999999999999999 9999999887753 468999999999987555
Q ss_pred ccHHHHHHHHHHHHHHh
Q 002164 881 ESIMHVLWETDRWLQKY 897 (958)
Q Consensus 881 ~~~~~~~~~i~~fl~~~ 897 (958)
.+.+.+.+.|.+||++|
T Consensus 265 ~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 265 NDKELILERSLAFIRKH 281 (281)
T ss_dssp TTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 55778899999999986
No 61
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.82 E-value=1.5e-19 Score=196.45 Aligned_cols=234 Identities=17% Similarity=0.131 Sum_probs=165.6
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-HCCc
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGF 713 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~ 713 (958)
..+..+.+++++.+|..+.+++|.|.+ ++.|+||++|||++..+. ...+ ...+..|+ +.||
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~------~~~p~vv~~HGgG~~~g~--------~~~~----~~~~~~la~~~g~ 117 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP------TPAPVVVYCHAGGFALGN--------LDTD----HRQCLELARRARC 117 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC------SSEEEEEEECCSTTTSCC--------TTTT----HHHHHHHHHHHTS
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC------CCCcEEEEECCCcCccCC--------hHHH----HHHHHHHHHHcCC
Confidence 345678899999999999999999974 248999999998643321 1111 23455666 4699
Q ss_pred EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeE
Q 002164 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCC 786 (958)
Q Consensus 714 ~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~a 786 (958)
.|+.++|+...++ .+...++|+.++++|+.++ ..+|++||+|+|+|+||++|+.++.+.++ .+++
T Consensus 118 ~vv~~dyr~~p~~--------~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~ 189 (317)
T 3qh4_A 118 AVVSVDYRLAPEH--------PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIF 189 (317)
T ss_dssp EEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCE
T ss_pred EEEEecCCCCCCC--------CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeE
Confidence 9999887644332 2356788999999999986 45788999999999999999999987544 4999
Q ss_pred EEEeccCCCCCCCCCCccccc---------chhhhcHHH----HHhcCcccccCCCC--CCEEEEeeCCCCCCCCChHHH
Q 002164 787 GIARSGAYNRTLTPFGFQNED---------RTLWEATST----YVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQS 851 (958)
Q Consensus 787 ~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~~~ 851 (958)
+++++|+++............ ...|..... ....+|... ..++ .|+||+||++|..+ .++
T Consensus 190 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~l~~lpP~li~~G~~D~~~----~~~ 264 (317)
T 3qh4_A 190 QLLHQPVLDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRR-GQLAGLPATLITCGEIDPFR----DEV 264 (317)
T ss_dssp EEEESCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGC-SCCTTCCCEEEEEEEESTTH----HHH
T ss_pred EEEECceecCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCcc-cccCCCCceeEEecCcCCCc----hhH
Confidence 999999887541100000000 011111000 001122211 1222 49999999999874 578
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCC----CcccHHHHHHHHHHHHHHhhc
Q 002164 852 DRFFNALKGHGALCRLVILPFESHGYA----ARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~p~~~H~~~----~~~~~~~~~~~i~~fl~~~l~ 899 (958)
.+++++|+..|+++++++||+++|.+. ..+...++++.+.+||.++|.
T Consensus 265 ~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 265 LDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 899999999999999999999999863 235567889999999999874
No 62
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.82 E-value=1.2e-19 Score=199.78 Aligned_cols=277 Identities=13% Similarity=0.046 Sum_probs=168.3
Q ss_pred CEEEEEEecCCCCceEEEEECCCCCeeEeecCC--CCCCC---CCCCcEEEEEEEeCCCeEEEEEEEecCCC-CCCCCCC
Q 002164 596 LKILTSKESKTENTQYYIQSWPDKKSCQITDFP--HPYPQ---LASLQKELIKYQRKDGVQLSATLYLPPGY-DPSKDGP 669 (958)
Q Consensus 596 ~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~~--~~~~~---~~~~~~~~~~~~~~dg~~l~~~l~~P~~~-~~~~~~~ 669 (958)
..+++...+...+...+++. .+|++.++.... .+.+. ...+..+.+.+.. +..+.+.+|+|++. .+ .++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~g~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~--~~~ 82 (338)
T 2o7r_A 8 TTGSSDPNTNLLKYLPIVLN-PDRTITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYN--SAK 82 (338)
T ss_dssp ----------CTTTCSCEEC-TTSCEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGS--SCC
T ss_pred CceeeccCcccccccceEEC-CCCeEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcC--CCC
Confidence 34555444444444344444 356555532211 11111 2345677788875 55677889999753 11 235
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~ 748 (958)
.|+||++|||++..+... . ......+..|+ ++||.|+.+++++ .+.. .....++|+.++++
T Consensus 83 ~p~vv~~HGgg~~~~~~~--------~--~~~~~~~~~la~~~g~~vv~~d~rg---~~~~-----~~~~~~~d~~~~~~ 144 (338)
T 2o7r_A 83 LPLVVYFHGGGFILFSAA--------S--TIFHDFCCEMAVHAGVVIASVDYRL---APEH-----RLPAAYDDAMEALQ 144 (338)
T ss_dssp EEEEEEECCSTTTSCCTT--------B--HHHHHHHHHHHHHHTCEEEEEECCC---TTTT-----CTTHHHHHHHHHHH
T ss_pred ceEEEEEcCCcCcCCCCC--------c--hhHHHHHHHHHHHCCcEEEEecCCC---CCCC-----CCchHHHHHHHHHH
Confidence 899999999865432211 0 00123456677 7899999966654 3322 22467889999999
Q ss_pred HHHHcC------CCCCCcEEEEEeChHHHHHHHHHHhCCC--------ceeEEEEeccCCCCCCCCCC--------c-c-
Q 002164 749 EVVRRG------VAHPSKIAVGGHSYGAFMTANLLAHAPH--------LFCCGIARSGAYNRTLTPFG--------F-Q- 804 (958)
Q Consensus 749 ~l~~~~------~~d~~~i~l~G~S~GG~~a~~~a~~~p~--------~~~a~v~~~~~~~~~~~~~~--------~-~- 804 (958)
|+.++. .+|+++++|+|||+||.+|+.++.+.|+ +++++|+.+|.++....... . .
T Consensus 145 ~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
T 2o7r_A 145 WIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPT 224 (338)
T ss_dssp HHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSCH
T ss_pred HHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccCH
Confidence 999863 2677899999999999999999999877 89999999998663321000 0 0
Q ss_pred cccchhhhcH------HHHHhcCccc---------ccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEE
Q 002164 805 NEDRTLWEAT------STYVEMSPFM---------SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (958)
Q Consensus 805 ~~~~~~~~~~------~~~~~~sp~~---------~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (958)
......|... ......+|+. .+.++.+|+||+||++|..++ .+.+++++|+..+.++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~----~~~~~~~~l~~~~~~~~~~~ 300 (338)
T 2o7r_A 225 FVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID----RQMELAERLEKKGVDVVAQF 300 (338)
T ss_dssp HHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH----HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH----HHHHHHHHHHHCCCcEEEEE
Confidence 0000111100 0000012221 112245699999999998863 56788999999999999999
Q ss_pred eCCCCccCCC--cccHHHHHHHHHHHHHHhhc
Q 002164 870 LPFESHGYAA--RESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 870 ~p~~~H~~~~--~~~~~~~~~~i~~fl~~~l~ 899 (958)
+++++|.+.. .+....+.+.+.+||.+++.
T Consensus 301 ~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 301 DVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp ESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred ECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 9999998742 33447788999999988764
No 63
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.82 E-value=4.9e-19 Score=192.22 Aligned_cols=234 Identities=16% Similarity=0.160 Sum_probs=163.7
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC-Cc
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GF 713 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~ 713 (958)
.....+.+++++.+| .+.+++|.|++. .++.|+||++|||++..+ +...+ ...+..|+++ ||
T Consensus 44 ~~~~~~~~~i~~~~g-~l~~~~~~P~~~----~~~~p~vv~~HGGg~~~g--------~~~~~----~~~~~~la~~~g~ 106 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR-TLKVRMYRPEGV----EPPYPALVYYHGGSWVVG--------DLETH----DPVCRVLAKDGRA 106 (310)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECTTC----CSSEEEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHTS
T ss_pred CcceEEEEEeccCCC-eEEEEEEecCCC----CCCCCEEEEECCCccccC--------ChhHh----HHHHHHHHHhcCC
Confidence 345678899998777 899999999753 234899999999864322 11122 2456677775 99
Q ss_pred EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeE
Q 002164 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCC 786 (958)
Q Consensus 714 ~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~a 786 (958)
.|+.++++ |.|.. .+.....|+.++++|+.++. .+|+++|+|+|+|+||.+|+.++.+.|+ ++++
T Consensus 107 ~v~~~d~r---g~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~ 178 (310)
T 2hm7_A 107 VVFSVDYR---LAPEH-----KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAF 178 (310)
T ss_dssp EEEEECCC---CTTTS-----CTTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEeCCC---CCCCC-----CCCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceE
Confidence 99996665 44432 12456789999999999874 3678899999999999999999987765 6999
Q ss_pred EEEeccCCCCC--CCCCCccc-ccc---------hhhhc----HH--HHHhcCcccc--cCCCCCCEEEEeeCCCCCCCC
Q 002164 787 GIARSGAYNRT--LTPFGFQN-EDR---------TLWEA----TS--TYVEMSPFMS--ANKLKKPILLVHGEEDNNSGT 846 (958)
Q Consensus 787 ~v~~~~~~~~~--~~~~~~~~-~~~---------~~~~~----~~--~~~~~sp~~~--~~~~~~P~Lii~G~~D~~v~~ 846 (958)
+|+++|..+.. .....+.. ... ..+.. .. .....+|+.. +..+ .|+||+||++|..+
T Consensus 179 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~-- 255 (310)
T 2hm7_A 179 QLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR-- 255 (310)
T ss_dssp EEEESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--
T ss_pred EEEEcCCcCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--
Confidence 99999987754 11000000 000 00000 00 0001233321 2233 49999999999873
Q ss_pred ChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhh
Q 002164 847 LTMQSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 847 ~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~~~i~~fl~~~l 898 (958)
.++.+++++|+..|.+++++++|+++|.+.. .+....+.+.+.+||.+++
T Consensus 256 --~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 256 --DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp --HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 6788999999999999999999999998743 2445778899999999886
No 64
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.82 E-value=1.1e-18 Score=190.01 Aligned_cols=234 Identities=18% Similarity=0.128 Sum_probs=163.7
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCc
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGF 713 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~ 713 (958)
..+..+.++++..+| .+.+++|.|.+ .++.|+||++|||++..+ +...+ ...+..|++ .||
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~-----~~~~p~vv~~HGGg~~~g--------~~~~~----~~~~~~La~~~g~ 122 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT-----QGPYGVLVYYHGGGFVLG--------DIESY----DPLCRAITNSCQC 122 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS-----CSCCCEEEEECCSTTTSC--------CTTTT----HHHHHHHHHHHTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC-----CCCCcEEEEECCCccccC--------ChHHH----HHHHHHHHHhcCC
Confidence 345678899988777 89999999975 234799999999864322 21222 234567776 499
Q ss_pred EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCC-C-CCCcEEEEEeChHHHHHHHHHHhCCCce---eEEE
Q 002164 714 AILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGV-A-HPSKIAVGGHSYGAFMTANLLAHAPHLF---CCGI 788 (958)
Q Consensus 714 ~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~-~-d~~~i~l~G~S~GG~~a~~~a~~~p~~~---~a~v 788 (958)
.|+.++++ |.|.+. ++..++|+.++++|+.++.. . |+++|+|+|+|+||.+|+.++.+.|++. +++|
T Consensus 123 ~Vv~~Dyr---g~~~~~-----~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~v 194 (323)
T 3ain_A 123 VTISVDYR---LAPENK-----FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQV 194 (323)
T ss_dssp EEEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred EEEEecCC---CCCCCC-----CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEE
Confidence 99996664 554432 24567899999999988631 1 7899999999999999999999887665 8999
Q ss_pred EeccCCCCCCCCCCcc--------ccc--chhhhc----HH--HHHhcCcccc-cCCCCCCEEEEeeCCCCCCCCChHHH
Q 002164 789 ARSGAYNRTLTPFGFQ--------NED--RTLWEA----TS--TYVEMSPFMS-ANKLKKPILLVHGEEDNNSGTLTMQS 851 (958)
Q Consensus 789 ~~~~~~~~~~~~~~~~--------~~~--~~~~~~----~~--~~~~~sp~~~-~~~~~~P~Lii~G~~D~~v~~~~~~~ 851 (958)
+++|..+.......+. ... ...|.. .. .....+|+.. +..+ .|+||++|++|.. ..++
T Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l----~~~~ 269 (323)
T 3ain_A 195 LIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPL----RDQG 269 (323)
T ss_dssp EESCCCSCCSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTT----HHHH
T ss_pred EEeccccCCCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCcc----HHHH
Confidence 9999876432210000 000 000100 00 0012234332 2222 4999999999987 4578
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhhc
Q 002164 852 DRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (958)
.+++++|+..|+++++++||+++|.+.. .+....+.+.+.+||.+++.
T Consensus 270 ~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 270 EAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999753 24457888999999999875
No 65
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.81 E-value=8.7e-19 Score=193.72 Aligned_cols=238 Identities=16% Similarity=0.126 Sum_probs=162.0
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEecCCCCC------------CCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCc
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDP------------SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGS 702 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~------------~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~ 702 (958)
..+..+.+.+.. +..+.+.+|+|++... ...++.|+||++|||++..+.. .. ....
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~--------~~--~~~~ 135 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSA--------NS--AIYD 135 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCT--------TB--HHHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCC--------cc--hhHH
Confidence 345567777765 5568889999986420 0124589999999986533211 11 0012
Q ss_pred HHHHHHH-HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChHHHHHHHH
Q 002164 703 TSVLLWL-ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG----VAHPS-KIAVGGHSYGAFMTANL 776 (958)
Q Consensus 703 ~~~~~la-~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~----~~d~~-~i~l~G~S~GG~~a~~~ 776 (958)
..+..|+ ++||+|+.+++++ .+.. .+...++|+.++++|+.++. .+|++ +|+|+|||+||.+|+.+
T Consensus 136 ~~~~~la~~~g~~vv~~d~rg---~~~~-----~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~ 207 (351)
T 2zsh_A 136 TLCRRLVGLCKCVVVSVNYRR---APEN-----PYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207 (351)
T ss_dssp HHHHHHHHHHTSEEEEECCCC---TTTS-----CTTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEecCCC---CCCC-----CCchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHH
Confidence 3456777 7899999977654 3322 23466789999999999864 47899 99999999999999999
Q ss_pred HHhCCC---ceeEEEEeccCCCCCCCCCCcc--------c--ccchhhhcH------HHHHhcCcc----cccCCCCC-C
Q 002164 777 LAHAPH---LFCCGIARSGAYNRTLTPFGFQ--------N--EDRTLWEAT------STYVEMSPF----MSANKLKK-P 832 (958)
Q Consensus 777 a~~~p~---~~~a~v~~~~~~~~~~~~~~~~--------~--~~~~~~~~~------~~~~~~sp~----~~~~~~~~-P 832 (958)
+.+.|+ +++++|+++|.++......... . .....|... ......+|+ ..+.++++ |
T Consensus 208 a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP 287 (351)
T 2zsh_A 208 ALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPK 287 (351)
T ss_dssp HHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCE
T ss_pred HHHhhccCCCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCC
Confidence 999887 8999999999876332100000 0 000011100 000011222 23445565 9
Q ss_pred EEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC---cccHHHHHHHHHHHHHH
Q 002164 833 ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA---RESIMHVLWETDRWLQK 896 (958)
Q Consensus 833 ~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~---~~~~~~~~~~i~~fl~~ 896 (958)
+||+||++|..+ ..+.+++++|+..|.+++++++++++|.+.. .+....+.+.+.+||++
T Consensus 288 ~Lii~G~~D~~~----~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 288 SLVVVAGLDLIR----DWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEEEEETTSTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCcch----HHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 999999999875 4678899999999999999999999998754 25667888899999875
No 66
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.81 E-value=5.9e-20 Score=196.62 Aligned_cols=237 Identities=13% Similarity=0.112 Sum_probs=153.2
Q ss_pred EEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEE
Q 002164 639 KELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (958)
Q Consensus 639 ~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~ 717 (958)
.+.+++.+. .|..+.+.+|+|++++ ..++|+||++||++..... +... ......++++||+|+.
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~~~-----------~~~~-~~~~~~~~~~g~~vv~ 86 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE---NRPLGVIYWLSGLTCTEQN-----------FITK-SGFQRYAAEHQVIVVA 86 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT---CCCEEEEEEECCTTCCSHH-----------HHHH-SCTHHHHHHHTCEEEE
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC---CCCCCEEEEEcCCCCCccc-----------hhhc-ccHHHHHhhCCeEEEE
Confidence 444555544 6889999999999865 2359999999997532211 1000 0123456778999999
Q ss_pred cCCC--CCC---------CCCCcccc----------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHH
Q 002164 718 GPTT--PII---------GEGDEEAN----------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANL 776 (958)
Q Consensus 718 ~~~~--~~~---------G~G~~~~~----------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~ 776 (958)
++.. +.. |.|.++.. ..+.....+++ +.++.+.. .++++++|+|+||||++|+.+
T Consensus 87 ~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~-~~~~~~~l~G~S~GG~~a~~~ 162 (283)
T 4b6g_A 87 PDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNEL---PRLIEKHF-PTNGKRSIMGHSMGGHGALVL 162 (283)
T ss_dssp ECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHH---HHHHHHHS-CEEEEEEEEEETHHHHHHHHH
T ss_pred eccccccccccccccccccCCCcccccCccCcccchhhHHHHHHHHH---HHHHHHhC-CCCCCeEEEEEChhHHHHHHH
Confidence 7642 111 22222110 01122223343 34444442 246899999999999999999
Q ss_pred HHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCC--CCCEEEEeeCCCCCCCCChHH-HHH
Q 002164 777 LAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL--KKPILLVHGEEDNNSGTLTMQ-SDR 853 (958)
Q Consensus 777 a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~--~~P~Lii~G~~D~~v~~~~~~-~~~ 853 (958)
+.++|++|+++++.+|+++....++........+......+...+|...+.++ .+|+|++||+.|..++ ... +.+
T Consensus 163 a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~--~~~~~~~ 240 (283)
T 4b6g_A 163 ALRNQERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLP--TQLRTED 240 (283)
T ss_dssp HHHHGGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHH--HHTCHHH
T ss_pred HHhCCccceeEEEECCccccccCcchhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCc--chhhHHH
Confidence 99999999999999998764322211000000011122233445555544444 3599999999999876 422 889
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 854 FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 854 ~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
++++|+..|+++++.++||++|.+. .....+..+++|+.++|+
T Consensus 241 ~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 241 FIETCRAANQPVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHHHHHHTCCCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999862 334567788999988763
No 67
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=3.1e-18 Score=206.98 Aligned_cols=318 Identities=14% Similarity=0.074 Sum_probs=200.8
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCC
Q 002164 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (958)
Q Consensus 109 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~ 188 (958)
..+..++||+| +++|+..+ +..+.. ..||++ . . + +..++|+...
T Consensus 24 ~~~~~~~~s~~--~~~~~~~~---------------------~~~~~~------~~l~~~-~-~-~--~~~~~l~~~~-- 67 (662)
T 3azo_A 24 GRPACVGAVGD--EVWWVAPR---------------------PAEAGR------ATLVRR-R-A-D--GAEESALPAP-- 67 (662)
T ss_dssp SCCEEEEEETT--EEEEEEEE---------------------TTTTTE------EEEEEE-C-T-T--SCEEESSCTT--
T ss_pred CccceeEEcCC--eEEEEecC---------------------cccCCc------EEEEEE-C-C-C--CCcceeCCCC--
Confidence 45778889965 68887753 111121 256665 2 2 2 5566776432
Q ss_pred Cccc---------ceeec--CCCCe-EEEEEeeccccCCCCCceEEEEEcC--C-CceeeccCCCCccccccccceEEec
Q 002164 189 AKLN---------FVTWS--QDGKH-LAFSIRIDAEDSSSSKLRVWVADVD--T-GKARPLFQSPDIYLNAIFDNFVWVN 253 (958)
Q Consensus 189 ~~~~---------~~~wS--PDG~~-iaf~~~~~~~~~~~~~~~l~~~~~~--~-g~~~~lt~~~~~~~~~~~~~~~wsp 253 (958)
..+. .+.|| |||++ |+|+.. ...+||+++++ + ++.++|+..+.......+..++|||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~--------~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 68 WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF--------GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT--------TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET
T ss_pred ccccccccccCCccceeeeecCCCeEEEEEEC--------CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC
Confidence 2333 56676 99999 999753 15689999998 6 8889998743110011156899999
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C------Ceee
Q 002164 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D------GTVK 326 (958)
Q Consensus 254 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~------g~~~ 326 (958)
||+.|+++..+.... .+. ....+||++++ + |+.+
T Consensus 140 Dg~~l~~~~~~~~~~--------------------------------~~~-------~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 140 ERGEVWCMAEEFTGE--------------------------------GPS-------DVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TTTEEEEEEEEECSS--------------------------------STT-------CEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCCEEEEEEecccCC--------------------------------CCC-------CceeEEEEEECCCCccccCCcee
Confidence 999999883211000 000 03467999999 7 7888
Q ss_pred ecC-CC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc-Cc---eEEEeccCCccccCcccccccccC
Q 002164 327 EIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GI---FVRELCDLPLAEDIPIAFNSVRKG 400 (958)
Q Consensus 327 ~l~-~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~-~~---~~~~l~~~~~~~~~p~~~~~~~~~ 400 (958)
.++ .+ ..+..++|||||++|+|.+...+.. .....+|++||++ ++ ..+.++... ...
T Consensus 181 ~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~-----~~~~~~i~~~d~~~~g~~~~~~~l~~~~------------~~~ 243 (662)
T 3azo_A 181 ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM-----PWEGTELKTARVTEDGRFADTRTLLGGP------------EEA 243 (662)
T ss_dssp ESSCSCSSEECCCEECTTSSEEEEEEECTTCC-----TTTCEEEEEEEECTTSCEEEEEEEEEET------------TBC
T ss_pred EEEecCCCcccCceECCCCCEEEEEECCCCCC-----CCCCcEEEEEEECCCCcccccEEeCCCC------------Cce
Confidence 888 65 6678899999999999998553210 0012489999998 45 556655421 023
Q ss_pred cceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeecccc---------CceeeecCCceEE
Q 002164 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRY---------GGISWCDDSLALV 471 (958)
Q Consensus 401 ~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~---------~~~~~spDg~~l~ 471 (958)
...+.|||||+ ++|..+. +....||++++ ++++.++++...... ..++|+|||+.+
T Consensus 244 ~~~~~~spdg~-l~~~~~~----------~~~~~l~~~~~---~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~- 308 (662)
T 3azo_A 244 IAQAEWAPDGS-LIVATDR----------TGWWNLHRVDP---ATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIA- 308 (662)
T ss_dssp EEEEEECTTSC-EEEEECT----------TSSCEEEEECT---TTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEE-
T ss_pred EcceEECCCCe-EEEEECC----------CCCeEEEEEEC---CCCceeecccccccccCccccccCceEeEeCCCEEE-
Confidence 46789999999 7765322 22347999985 566777775544433 345666777644
Q ss_pred EEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEe-ccCCceEEEEeeeccCCCcEEEEccCCCCCCCC
Q 002164 472 YESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPEGN 550 (958)
Q Consensus 472 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (958)
|.... ...+||.++++++ +...+... ...+ ..+ ++||+.+++..... ..
T Consensus 309 ~~~~~--~~~~l~~~d~~~~--~~~~l~~~-~~~~--------~~~~s~~~~~~~~~~~~~-----------------~~ 358 (662)
T 3azo_A 309 VVHGK--GAAVLGILDPESG--ELVDAAGP-WTEW--------AATLTVSGTRAVGVAASP-----------------RT 358 (662)
T ss_dssp EEEBS--SSCEEEEEETTTT--EEEECCSS-CCEE--------EEEEEEETTEEEEEEEET-----------------TE
T ss_pred EEEEc--CccEEEEEECCCC--cEEEecCC-CCeE--------EEEEecCCCEEEEEEcCC-----------------CC
Confidence 44444 3478999998874 33333221 1111 123 78888888776421 12
Q ss_pred CCeEEEEECCCCceEEEecCC
Q 002164 551 IPFLDLFDINTGSKERIWESD 571 (958)
Q Consensus 551 ~~~L~~~dl~~g~~~~l~~~~ 571 (958)
...||++|+++++.++|+...
T Consensus 359 ~~~i~~~d~~~g~~~~l~~~~ 379 (662)
T 3azo_A 359 AYEVVELDTVTGRARTIGARH 379 (662)
T ss_dssp EEEEEEEETTTCCEEEEESCC
T ss_pred CCEEEEEECCCCceEEeecCC
Confidence 346999999999998887654
No 68
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=1.4e-17 Score=202.59 Aligned_cols=332 Identities=11% Similarity=0.066 Sum_probs=203.9
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCcee
Q 002164 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (958)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~ 180 (958)
++.+++..+....+ +|||++++|.... .+... ..||+.+..+ +..+
T Consensus 66 ~~~~~~~~~~~~~p--~~dG~~~~~~~~~----------------------~~~~~------~~l~~~~~~~----~~~~ 111 (710)
T 2xdw_A 66 RMTELYDYPKYSCH--FKKGKRYFYFYNT----------------------GLQNQ------RVLYVQDSLE----GEAR 111 (710)
T ss_dssp HHHHHHCSCEECCC--EEETTEEEEEEEC----------------------SSCSS------CEEEEESSTT----SCCE
T ss_pred HHHHhhccccCCCC--EEECCEEEEEEEc----------------------CCceE------EEEEEEcCCC----CCcE
Confidence 45666766556666 4999999999874 11111 2567766532 3444
Q ss_pred eecc---CCCCC--cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCC
Q 002164 181 EIQG---FPDGA--KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNS 255 (958)
Q Consensus 181 ~lt~---~~~~~--~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG 255 (958)
.|.. +..+. .+..++|||||++|||..+.. ++...+||++|+++|+..+++..... +..++|||||
T Consensus 112 ~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~----G~~~~~i~v~d~~tg~~~~~~~~~~~-----~~~~~wspDg 182 (710)
T 2xdw_A 112 VFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS----GSDWVTIKFMKVDGAKELPDVLERVK-----FSCMAWTHDG 182 (710)
T ss_dssp EEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET----TCSCEEEEEEETTTTEEEEEEEEEEC-----SCCEEECTTS
T ss_pred EEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC----CCceEEEEEEECCCCCCCcccccCcc-----cceEEEEeCC
Confidence 3321 12222 577899999999999988633 44456999999999998775432211 4579999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee--eecCCC-
Q 002164 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV--KEIGPP- 331 (958)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~--~~l~~~- 331 (958)
+.|+|+......... .+.. ... ....+||++++ ++.. +.+...
T Consensus 183 ~~l~~~~~~~~~~~~------~~~~-------------------~~~--------~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 183 KGMFYNAYPQQDGKS------DGTE-------------------TST--------NLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp SEEEEEECCCCSSCC------SSSC-------------------CCC--------CCCCEEEEEETTSCGGGCEEEECCT
T ss_pred CEEEEEEECCccccc------cccc-------------------ccc--------CCCCEEEEEECCCCcccceEEeccC
Confidence 999998543321100 0000 000 02356999999 6642 333222
Q ss_pred ---ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC------c--eEEEeccCCccccCcccccccccC
Q 002164 332 ---AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG------I--FVRELCDLPLAEDIPIAFNSVRKG 400 (958)
Q Consensus 332 ---~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~------~--~~~~l~~~~~~~~~p~~~~~~~~~ 400 (958)
.....+.|||||++|++.+.... ....+++++|+++ + ..+.|+.... .
T Consensus 230 ~~~~~~~~~~~SpDg~~l~~~~~~~~--------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-------------~ 288 (710)
T 2xdw_A 230 DEPKWMGGAELSDDGRYVLLSIREGC--------DPVNRLWYCDLQQESNGITGILKWVKLIDNFE-------------G 288 (710)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECSS--------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-------------S
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEccC--------CCccEEEEEECcccccccCCccceEEeeCCCC-------------c
Confidence 23568899999999999985421 1135899999986 4 4555554221 1
Q ss_pred cceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC---ceEEEeecc--ccCceeeecCCceEEEEEe
Q 002164 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEILHKLDL--RYGGISWCDDSLALVYESW 475 (958)
Q Consensus 401 ~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~---~~~l~~~~~--~~~~~~~spDg~~l~~~~~ 475 (958)
....|+|||+.|++.++.. .....|+++++ +++. .+.+..... .+..+.|++++ .|++...
T Consensus 289 -~~~~~s~dg~~l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~ 354 (710)
T 2xdw_A 289 -EYDYVTNEGTVFTFKTNRH---------SPNYRLINIDF---TDPEESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYL 354 (710)
T ss_dssp -CEEEEEEETTEEEEEECTT---------CTTCEEEEEET---TSCCGGGCEEEECCCSSCEEEEEEEETTT-EEEEEEE
T ss_pred -EEEEEeccCCEEEEEECCC---------CCCCEEEEEeC---CCCCcccceeccCCCCCCeEEEEEEEcCC-EEEEEEE
Confidence 1235999999999974321 23557999996 4443 356654432 45678898554 5556555
Q ss_pred ccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEE
Q 002164 476 YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (958)
Q Consensus 476 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 555 (958)
.++ ..+||++++.++. ....+. .....+.+ ++++|||+.++|..... .....||
T Consensus 355 ~~g-~~~l~~~~~~~g~-~~~~l~-~~~~~v~~------~~~s~d~~~l~~~~ss~-----------------~~P~~i~ 408 (710)
T 2xdw_A 355 HDV-KNTLQLHDLATGA-LLKIFP-LEVGSVVG------YSGQKKDTEIFYQFTSF-----------------LSPGIIY 408 (710)
T ss_dssp ETT-EEEEEEEETTTCC-EEEEEC-CCSSEEEE------EECCTTCSEEEEEEECS-----------------SCCCEEE
T ss_pred ECC-EEEEEEEECCCCC-EEEecC-CCCceEEE------EecCCCCCEEEEEEeCC-----------------CCCCEEE
Confidence 443 2789999985541 122222 22222222 67899999888876321 1234699
Q ss_pred EEECCCCc--eEEEec
Q 002164 556 LFDINTGS--KERIWE 569 (958)
Q Consensus 556 ~~dl~~g~--~~~l~~ 569 (958)
+||+++|+ .+.+..
T Consensus 409 ~~d~~tg~~~~~~l~~ 424 (710)
T 2xdw_A 409 HCDLTKEELEPRVFRE 424 (710)
T ss_dssp EEETTSSSCCCEEEEE
T ss_pred EEECCCCccceEEeee
Confidence 99999888 555544
No 69
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.81 E-value=9e-19 Score=191.27 Aligned_cols=237 Identities=20% Similarity=0.196 Sum_probs=164.7
Q ss_pred CCCcEEEEEEEeCCCe-EEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CC
Q 002164 635 ASLQKELIKYQRKDGV-QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RG 712 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~-~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G 712 (958)
..+..+.+++++.+|. .+.+++|.|++. .++.|+||++|||++..++ ... ....+..|++ .|
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~----~~~~p~vv~~HGgg~~~g~--------~~~----~~~~~~~la~~~G 110 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAIGT--------AES----SDPFCVEVARELG 110 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTSCC--------GGG----GHHHHHHHHHHHC
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC----CCCCcEEEEECCCccccCC--------hhh----hHHHHHHHHHhcC
Confidence 4556788999988887 899999999752 2358999999998643221 111 1234556776 59
Q ss_pred cEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCCC----cee
Q 002164 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAPH----LFC 785 (958)
Q Consensus 713 ~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~ 785 (958)
|.|+.++++ |.|.+. ++....|+.++++|+.++ ..+|+++|+|+|+|+||++|+.++.+.++ .++
T Consensus 111 ~~Vv~~d~r---g~~~~~-----~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (323)
T 1lzl_A 111 FAVANVEYR---LAPETT-----FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 182 (323)
T ss_dssp CEEEEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred cEEEEecCC---CCCCCC-----CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCee
Confidence 999996554 555442 235678899999999874 23688899999999999999999987654 499
Q ss_pred EEEEeccCCCCCCCCCCccc-ccchhhhc------HHHH--------------HhcCcccccCCCC--CCEEEEeeCCCC
Q 002164 786 CGIARSGAYNRTLTPFGFQN-EDRTLWEA------TSTY--------------VEMSPFMSANKLK--KPILLVHGEEDN 842 (958)
Q Consensus 786 a~v~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~--------------~~~sp~~~~~~~~--~P~Lii~G~~D~ 842 (958)
++|+++|..+.......+.. .....|.. ...| ...+|+.. ..++ +|+||+||++|.
T Consensus 183 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~ 261 (323)
T 1lzl_A 183 FQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDP 261 (323)
T ss_dssp EEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCT
T ss_pred EEEEECCccCCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccC-cccCCCChhheEECCcCC
Confidence 99999998775432100000 00000000 0011 11223322 1222 699999999998
Q ss_pred CCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC---cccHHHHHHHHHHHHHHhhcc
Q 002164 843 NSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA---RESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 843 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~---~~~~~~~~~~i~~fl~~~l~~ 900 (958)
. ..++.+++++|+..|+++++++|||++|.+.. .+....+.+.+.+||.+++..
T Consensus 262 ~----~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 318 (323)
T 1lzl_A 262 L----RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318 (323)
T ss_dssp T----HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred c----hHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhcc
Confidence 7 46788999999999999999999999998642 233567889999999999853
No 70
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.81 E-value=2.2e-17 Score=196.02 Aligned_cols=355 Identities=12% Similarity=0.108 Sum_probs=231.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCC--------chhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceee
Q 002164 110 PLPALSFSPQRDKILFLKRRALPP--------LEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~ 181 (958)
.+..+.++|||++|+....+.... +..+..+...+..+.+++++......+.++.|.+|+... .....
T Consensus 182 ~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~----~~~~~ 257 (577)
T 2ymu_A 182 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----QLLQT 257 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS----CEEEE
T ss_pred ceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC----CEEEE
Confidence 345678999999998877652222 223334445556777888776655555557789998632 33444
Q ss_pred eccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEE
Q 002164 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (958)
Q Consensus 182 lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~ 261 (958)
+.+ ....+...+|+|||+.|+.... ...|.+|+..+...+.+...... +..++|+|||+.|+..
T Consensus 258 ~~~--~~~~v~~v~~~~d~~~l~~~~~---------d~~i~~w~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~t~ 321 (577)
T 2ymu_A 258 LTG--HSSSVNGVAFRPDGQTIASASD---------DKTVKLWNRNGQLLQTLTGHSSS-----VWGVAFSPDGQTIASA 321 (577)
T ss_dssp ECC--CSSCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCSSC-----EEEEEECTTSSEEEEE
T ss_pred Eec--CCCCEEEEEEcCCCCEEEEEeC---------CCEEEEEeCCCcEEEEEecCCCC-----eEEEEECCCCCEEEEE
Confidence 543 2346888999999999988652 45688888776555555433322 6789999999999876
Q ss_pred ecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-cccccccc
Q 002164 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDP 339 (958)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~ 339 (958)
. ....|.++++ +.....+... ..+..++|
T Consensus 322 ~-------------------------------------------------~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~ 352 (577)
T 2ymu_A 322 S-------------------------------------------------DDKTVKLWNRNGQHLQTLTGHSSSVWGVAF 352 (577)
T ss_dssp E-------------------------------------------------TTSCEEEEETTSCEEEEECCCSSCEEEEEE
T ss_pred e-------------------------------------------------CCCeEEEEeCCCCeeEEEeCCCCCEEEEEE
Confidence 2 1133556677 5555666554 66788999
Q ss_pred CCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEe
Q 002164 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (958)
Q Consensus 340 SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~ 419 (958)
+|||++|+....+ +.+.+|+..+.....+..+. ..+..+.|+|||+.|+..
T Consensus 353 s~~g~~l~~~~~d-------------g~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~dg~~l~~~--- 403 (577)
T 2ymu_A 353 SPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVRGVAFSPDGQTIASA--- 403 (577)
T ss_dssp CTTSSEEEEEETT-------------SEEEEEETTCCEEEEEECCS-------------SCEEEEEECTTSSCEEEE---
T ss_pred CCCCCEEEEEeCC-------------CEEEEEcCCCCEEEEecCCC-------------CCeEEEEECCCCCEEEEE---
Confidence 9999999887633 48999998877666654432 345789999999988763
Q ss_pred ccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002164 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (958)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 499 (958)
+..+.|.+|+. ++.....+......+..++|+||++.|+....++ .|.+++..+ +.....
T Consensus 404 ----------~~d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~----~v~~w~~~~---~~~~~~ 463 (577)
T 2ymu_A 404 ----------SDDKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDK----TVKLWNRNG---QLLQTL 463 (577)
T ss_dssp ----------ETTSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTS---CEEEEE
T ss_pred ----------eCCCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCC----EEEEEECCC---CEEEEE
Confidence 34567889984 5655566666677788899999999998776443 244445543 223333
Q ss_pred ccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCccccccee
Q 002164 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (958)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~ 579 (958)
......+.. +.|+|||++|+....+ ..|++||.++...+.+...... +
T Consensus 464 ~~~~~~v~~------~~~spd~~~las~~~d---------------------~~i~iw~~~~~~~~~~~~h~~~-----v 511 (577)
T 2ymu_A 464 TGHSSSVRG------VAFSPDGQTIASASDD---------------------KTVKLWNRNGQLLQTLTGHSSS-----V 511 (577)
T ss_dssp ECCSSCEEE------EEECTTSCEEEEEETT---------------------SEEEEEETTSCEEEEEECCSSC-----E
T ss_pred cCCCCCEEE------EEEcCCCCEEEEEeCC---------------------CEEEEEcCCCCEEEEEeCCCCC-----E
Confidence 333333333 7899999998876521 2589999754444444332221 2
Q ss_pred EeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEee
Q 002164 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQIT 625 (958)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt 625 (958)
. ..+|+|||+.|+.... ...+++++.++.....+.
T Consensus 512 ~-------~l~~s~dg~~l~s~~~----dg~v~lwd~~~~~~~~~~ 546 (577)
T 2ymu_A 512 R-------GVAFSPDGQTIASASD----DKTVKLWNRNGQLLQTLT 546 (577)
T ss_dssp E-------EEEECTTSSCEEEEET----TSEEEEECTTSCEEEEEE
T ss_pred E-------EEEEcCCCCEEEEEEC----cCEEEEEeCCCCEEEEEc
Confidence 2 2478999987664433 246888886433333333
No 71
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.81 E-value=4.3e-19 Score=192.93 Aligned_cols=233 Identities=17% Similarity=0.107 Sum_probs=161.6
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~v 715 (958)
...+.+++++.+| .+.+++|.|++ ..+.|+||++|||++..+. ... ....+..|++ .||.|
T Consensus 49 ~~~~~~~i~~~~g-~~~~~~~~P~~-----~~~~p~vv~~HGgg~~~g~--------~~~----~~~~~~~la~~~g~~v 110 (313)
T 2wir_A 49 HRVEDITIPGRGG-PIRARVYRPRD-----GERLPAVVYYHGGGFVLGS--------VET----HDHVCRRLANLSGAVV 110 (313)
T ss_dssp SEEEEEEEEETTE-EEEEEEEECSC-----CSSEEEEEEECCSTTTSCC--------TGG----GHHHHHHHHHHHCCEE
T ss_pred ceEEEEEeeCCCC-cEEEEEEecCC-----CCCccEEEEECCCcccCCC--------hHH----HHHHHHHHHHHcCCEE
Confidence 4577889998777 99999999975 2248999999998643221 111 1244567777 59999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEE
Q 002164 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGI 788 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v 788 (958)
+.+++ +|.|.+. ++....|+.++++|+.++. .+|+++|+|+|+|+||.+++.++.+.|++ ++++|
T Consensus 111 ~~~d~---rg~g~~~-----~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v 182 (313)
T 2wir_A 111 VSVDY---RLAPEHK-----FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQV 182 (313)
T ss_dssp EEEEC---CCTTTSC-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEeec---CCCCCCC-----CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEE
Confidence 99555 4555542 2345788999999998862 36778999999999999999999987766 99999
Q ss_pred EeccCCC-CCCCCCCccc-c--cc---------hhhh----cH--HHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChH
Q 002164 789 ARSGAYN-RTLTPFGFQN-E--DR---------TLWE----AT--STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTM 849 (958)
Q Consensus 789 ~~~~~~~-~~~~~~~~~~-~--~~---------~~~~----~~--~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~ 849 (958)
+++|.++ .......+.. . .. ..+. .. ......+|+...-+...|+||+||++|..+ .
T Consensus 183 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~----~ 258 (313)
T 2wir_A 183 LIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLSNLPPALVITAEYDPLR----D 258 (313)
T ss_dssp EESCCCCCSSCCCHHHHHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTTCCCEEEEEEEECTTH----H
T ss_pred EEcCccCCCCCCCcCHHHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccccCCCcceEEEcCcCcCh----H
Confidence 9999877 3221100000 0 00 0000 00 000112444211122259999999999874 5
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhhc
Q 002164 850 QSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 850 ~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (958)
++.+++++|+..|+++++.++||++|.+.. .+...++.+.+.+||.++++
T Consensus 259 ~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 259 EGELYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999999998742 24456788899999988763
No 72
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.80 E-value=2.1e-18 Score=189.93 Aligned_cols=232 Identities=17% Similarity=0.149 Sum_probs=164.4
Q ss_pred EEE-EEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEc
Q 002164 640 ELI-KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (958)
Q Consensus 640 ~~~-~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~ 718 (958)
+.+ .+.+.||..+.+.++.|.+ .+.|+||++||++.... .....+..|+++||.|++
T Consensus 35 ~~~~~~~~~dg~~l~~~~~~p~~------~~~p~vv~~HG~~~~~~---------------~~~~~~~~l~~~g~~vi~- 92 (342)
T 3hju_A 35 QDLPHLVNADGQYLFCRYWKPTG------TPKALIFVSHGAGEHSG---------------RYEELARMLMGLDLLVFA- 92 (342)
T ss_dssp TSSCEEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCGG---------------GGHHHHHHHHTTTEEEEE-
T ss_pred ccCceEEccCCeEEEEEEeCCCC------CCCcEEEEECCCCcccc---------------hHHHHHHHHHhCCCeEEE-
Confidence 344 6788899999999998863 23799999999642211 122456678889999999
Q ss_pred CCCCCCCCCCcccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCC
Q 002164 719 PTTPIIGEGDEEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (958)
Q Consensus 719 ~~~~~~G~G~~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (958)
.+.+|+|.+... .......++|+.++++++..+ .+.++++|+|||+||.+++.++.++|++++++|+++|...
T Consensus 93 --~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 168 (342)
T 3hju_A 93 --HDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVL 168 (342)
T ss_dssp --ECCTTSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCS
T ss_pred --EcCCCCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccc
Confidence 555677776532 233567789999999999887 4557999999999999999999999999999999998765
Q ss_pred CCCCCCC------------------ccccc-chhhhcH---HHHH---------------------hcCcccccCCCCCC
Q 002164 796 RTLTPFG------------------FQNED-RTLWEAT---STYV---------------------EMSPFMSANKLKKP 832 (958)
Q Consensus 796 ~~~~~~~------------------~~~~~-~~~~~~~---~~~~---------------------~~sp~~~~~~~~~P 832 (958)
....... ..... ....... ..+. ..+....+.++++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 248 (342)
T 3hju_A 169 ANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP 248 (342)
T ss_dssp CCTTTTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSC
T ss_pred cchhhhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcC
Confidence 3211000 00000 0000000 0000 00112446778999
Q ss_pred EEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc--ccHHHHHHHHHHHHHHhhccC
Q 002164 833 ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR--ESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 833 ~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~--~~~~~~~~~i~~fl~~~l~~~ 901 (958)
+|+++|++|..++ ++.+.++++.++. ..+++++++++||.+... +....++..+++||.+++...
T Consensus 249 vlii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (342)
T 3hju_A 249 FLLLQGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 315 (342)
T ss_dssp EEEEEETTCSSSC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEeCCCcccC--hHHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCCC
Confidence 9999999999998 8888888887753 258999999999997432 335677888999999998643
No 73
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.80 E-value=7.2e-20 Score=198.06 Aligned_cols=210 Identities=16% Similarity=0.152 Sum_probs=150.1
Q ss_pred EEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEc
Q 002164 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (958)
Q Consensus 639 ~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~ 718 (958)
...+.|. +..+...+|+|++. .++.|+||++|||++..+.. ..+ ...+..|+++||+|+.+
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~----~~~~p~vv~~HGgg~~~~~~--------~~~----~~~~~~l~~~G~~v~~~ 118 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT----TNQAPLFVFVHGGYWQEMDM--------SMS----CSIVGPLVRRGYRVAVM 118 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC----CTTCCEEEEECCSTTTSCCG--------GGS----CTTHHHHHHTTCEEEEE
T ss_pred eeeeccC---CCCcEEEEEecCCC----CCCCCEEEEECCCcCcCCCh--------hHH----HHHHHHHHhCCCEEEEe
Confidence 3455554 34456688888642 23589999999986543221 111 12366789999999996
Q ss_pred CCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHhCC-------CceeEEEEe
Q 002164 719 PTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAHAP-------HLFCCGIAR 790 (958)
Q Consensus 719 ~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~~p-------~~~~a~v~~ 790 (958)
+++ |.+.. .....+.|+.++++|+.++ ...++++|+|+|||+||++++.++.+.+ ++++++|++
T Consensus 119 d~r---~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~ 190 (303)
T 4e15_A 119 DYN---LCPQV-----TLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFL 190 (303)
T ss_dssp CCC---CTTTS-----CHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEE
T ss_pred cCC---CCCCC-----ChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEE
Confidence 665 43332 2466788999999999874 2356789999999999999999998653 279999999
Q ss_pred ccCCCCCCCCCCc-ccccchhhhcHHHHHhcCcc-cccCCC----CCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCc
Q 002164 791 SGAYNRTLTPFGF-QNEDRTLWEATSTYVEMSPF-MSANKL----KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL 864 (958)
Q Consensus 791 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp~-~~~~~~----~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 864 (958)
+|+++........ ......+....+.+...+|+ ..+.++ ++|+||+||++|..|+ +.++.+++++|+..|.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~l~~~g~~ 268 (303)
T 4e15_A 191 CGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTF--IEQSRHYADVLRKKGYK 268 (303)
T ss_dssp SCCCCCHHHHTCTTTSGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHH--HHHHHHHHHHHHHHTCC
T ss_pred eeeeccHhhhcccccchhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCc--hHHHHHHHHHHHHCCCc
Confidence 9987742110000 00111122233445566777 566665 8999999999999998 99999999999999999
Q ss_pred EEEEEeCCCCccC
Q 002164 865 CRLVILPFESHGY 877 (958)
Q Consensus 865 ~~~~~~p~~~H~~ 877 (958)
++++++|+++|..
T Consensus 269 ~~~~~~~g~~H~~ 281 (303)
T 4e15_A 269 ASFTLFKGYDHFD 281 (303)
T ss_dssp EEEEEEEEEETTH
T ss_pred eEEEEeCCCCchH
Confidence 9999999999953
No 74
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.80 E-value=5e-18 Score=179.96 Aligned_cols=225 Identities=12% Similarity=0.110 Sum_probs=155.0
Q ss_pred EEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEc
Q 002164 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (958)
Q Consensus 639 ~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~ 718 (958)
.+..++.+.||..+++.+|.|.+ .++.|+||++||+++..+. .. .+.......++++ |.|+++
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~--------~~---~~~~~~~~~l~~~-~~v~~~ 65 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN-----QPTKGVIVYIHGGGLMFGK--------AN---DLSPQYIDILTEH-YDLIQL 65 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS-----SSCSEEEEEECCSTTTSCC--------TT---CSCHHHHHHHTTT-EEEEEE
T ss_pred ceEEEEecCCcEEEEEEEEccCC-----CCCCCEEEEEECCcccCCc--------hh---hhHHHHHHHHHhC-ceEEee
Confidence 45677888999999999999864 2347999999997533211 11 1122445556666 999995
Q ss_pred CCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC
Q 002164 719 PTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (958)
Q Consensus 719 ~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~ 798 (958)
+++ |.|.+ .......|+.++++++.++ .+.++++|+|||+||.+++.++.+ ++++++|+.+|..+...
T Consensus 66 d~~---~~~~~-----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~ 133 (275)
T 3h04_A 66 SYR---LLPEV-----SLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINT 133 (275)
T ss_dssp CCC---CTTTS-----CHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCS
T ss_pred ccc---cCCcc-----ccchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccc
Confidence 554 55443 2456788999999999987 567899999999999999999999 68999999999876421
Q ss_pred CCCCcc---------------------c---ccchhhhcHHH-------------HH-------hcC-cccccCCCCCCE
Q 002164 799 TPFGFQ---------------------N---EDRTLWEATST-------------YV-------EMS-PFMSANKLKKPI 833 (958)
Q Consensus 799 ~~~~~~---------------------~---~~~~~~~~~~~-------------~~-------~~s-p~~~~~~~~~P~ 833 (958)
..+... . ........... +. ... ....+.+++ |+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~ 212 (275)
T 3h04_A 134 EPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PV 212 (275)
T ss_dssp HHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CE
T ss_pred cccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CE
Confidence 100000 0 00000000000 00 000 011235666 99
Q ss_pred EEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccH--HHHHHHHHHHHHHhhc
Q 002164 834 LLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESI--MHVLWETDRWLQKYCV 899 (958)
Q Consensus 834 Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~--~~~~~~i~~fl~~~l~ 899 (958)
|++||++|..+| +..+.++++.++ ..+++++|+++|.+...... .++.+.+.+||++++.
T Consensus 213 lii~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 213 FIAHCNGDYDVP--VEESEHIMNHVP----HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEEETTCSSSC--THHHHHHHTTCS----SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCC--hHHHHHHHHhcC----CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 999999999998 888888877554 46899999999998655443 7889999999999873
No 75
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.80 E-value=3.3e-18 Score=181.27 Aligned_cols=228 Identities=17% Similarity=0.129 Sum_probs=161.2
Q ss_pred cEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEE
Q 002164 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (958)
Q Consensus 638 ~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~ 717 (958)
..+.+.++ .+|.++.++++.|.+ .+.|+||++||.+.. .........+..|+++||.|++
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~------~~~p~vv~~HG~~~~-------------~~~~~~~~~~~~l~~~G~~v~~ 80 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG------EIYDMAIIFHGFTAN-------------RNTSLLREIANSLRDENIASVR 80 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS------SSEEEEEEECCTTCC-------------TTCHHHHHHHHHHHHTTCEEEE
T ss_pred cceEEEec-cCCEEEEEEEEcCCC------CCCCEEEEEcCCCCC-------------ccccHHHHHHHHHHhCCcEEEE
Confidence 34555555 489999999999864 137999999996421 0111123456678899999999
Q ss_pred cCCCCCCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCC
Q 002164 718 GPTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (958)
Q Consensus 718 ~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (958)
.+.+|+|.+... ........+|+.++++++.++... ++++|+|||+||.+++.++.++|++++++|+++|...
T Consensus 81 ---~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 155 (270)
T 3pfb_A 81 ---FDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHV--RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAAT 155 (270)
T ss_dssp ---ECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTE--EEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTH
T ss_pred ---EccccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCC--CeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccc
Confidence 555677766543 223567789999999999887433 5999999999999999999999999999999998653
Q ss_pred CCC------------CCCCcccc----cch-hhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHH
Q 002164 796 RTL------------TPFGFQNE----DRT-LWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNAL 858 (958)
Q Consensus 796 ~~~------------~~~~~~~~----~~~-~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l 858 (958)
... .+...... ... .......+...+....+.++++|+|+++|++|..+| +..+.++++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~ 233 (270)
T 3pfb_A 156 LKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVS--PNASKKYDQIY 233 (270)
T ss_dssp HHHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSC--THHHHHHHHHC
T ss_pred cchhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCC--HHHHHHHHHhC
Confidence 110 00000000 000 000112233445556778899999999999999998 88888887775
Q ss_pred HhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 859 KGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 859 ~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
+ .++++++++++|.+. .+....+.+.+.+||.++
T Consensus 234 ~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 234 Q----NSTLHLIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp S----SEEEEEETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred C----CCeEEEcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 3 479999999999975 556677888888888764
No 76
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.80 E-value=8.7e-19 Score=191.08 Aligned_cols=230 Identities=15% Similarity=0.110 Sum_probs=154.1
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAI 715 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~v 715 (958)
...+.+++ +|..+ |+|++. .. ..|+||++|||++..++. .. ....+..|++ .||.|
T Consensus 58 ~~~~~~~~---~g~~~----~~p~~~--~~--~~~~vv~~HGgg~~~g~~--------~~----~~~~~~~la~~~g~~v 114 (322)
T 3k6k_A 58 VELTLTDL---GGVPC----IRQATD--GA--GAAHILYFHGGGYISGSP--------ST----HLVLTTQLAKQSSATL 114 (322)
T ss_dssp CEEEEEEE---TTEEE----EEEECT--TC--CSCEEEEECCSTTTSCCH--------HH----HHHHHHHHHHHHTCEE
T ss_pred ceEEEEEE---CCEeE----EecCCC--CC--CCeEEEEEcCCcccCCCh--------HH----HHHHHHHHHHhcCCEE
Confidence 34444444 67655 566541 11 245599999986432211 11 1233456665 49999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEec
Q 002164 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARS 791 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~ 791 (958)
++++++.. +.. .++..++|+.++++|+.++ .+|+++|+|+|+|+||.+|+.++.+.++. ++++|+++
T Consensus 115 ~~~dyr~~---~~~-----~~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~ 185 (322)
T 3k6k_A 115 WSLDYRLA---PEN-----PFPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLS 185 (322)
T ss_dssp EEECCCCT---TTS-----CTTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEES
T ss_pred EEeeCCCC---CCC-----CCchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEec
Confidence 99777533 222 2346678999999999998 46889999999999999999999886654 99999999
Q ss_pred cCCCCCCCCCCcccc-cchhhhc-------HHHH--------HhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHH
Q 002164 792 GAYNRTLTPFGFQNE-DRTLWEA-------TSTY--------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (958)
Q Consensus 792 ~~~~~~~~~~~~~~~-~~~~~~~-------~~~~--------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~ 855 (958)
|.++.......+... ...++.. ...| ...+|+....+..+|+||+||++|.. ..++.+++
T Consensus 186 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~----~~~~~~~~ 261 (322)
T 3k6k_A 186 PFVDLTLSRWSNSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL----LSDSTTLA 261 (322)
T ss_dssp CCCCTTCCSHHHHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT----HHHHHHHH
T ss_pred CCcCcccCccchhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc----HHHHHHHH
Confidence 988754322111000 0000000 0111 11245443334447999999999976 57889999
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhhccCC
Q 002164 856 NALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 856 ~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
++|+..|+++++++||+++|.+.. .+....+++.+.+||.+++....
T Consensus 262 ~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3k6k_A 262 ERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKLA 312 (322)
T ss_dssp HHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC---
T ss_pred HHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999998743 24467889999999999986543
No 77
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=1.3e-17 Score=202.23 Aligned_cols=329 Identities=13% Similarity=0.049 Sum_probs=202.7
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCcee
Q 002164 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (958)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~ 180 (958)
++..++....... .+|||++++|...+ .+... ..||+.+.. + +..+
T Consensus 62 ~~~~~~~~~~~~~--p~~dG~~~~~~~~~----------------------~~~~~------~~l~~~~~~--~--~~~~ 107 (695)
T 2bkl_A 62 RFKELFYTDSVST--PSRRNGRFFYVRTH----------------------KDKEK------AILYWRQGE--S--GQEK 107 (695)
T ss_dssp HHHHHHSCCEECC--CEEETTEEEEEEEC----------------------TTCSS------CEEEEEEST--T--SCCE
T ss_pred HHHHhhccccCCC--CEEECCEEEEEEEc----------------------CCCeE------EEEEEEcCC--C--CCcE
Confidence 4556666544444 45999999999875 11111 357887753 2 4556
Q ss_pred eeccCC---CC--CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCC
Q 002164 181 EIQGFP---DG--AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNS 255 (958)
Q Consensus 181 ~lt~~~---~~--~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG 255 (958)
+|+... .+ ..+..++|||||++|||+.+.. +++...||++|+++|+..+....+... ...++|||||
T Consensus 108 ~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~----G~~~~~i~v~dl~tg~~~~~~~~~~~~----~~~~~wspDg 179 (695)
T 2bkl_A 108 VLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN----AADEAVLHVIDVDSGEWSKVDVIEGGK----YATPKWTPDS 179 (695)
T ss_dssp EEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET----TCSCCEEEEEETTTCCBCSSCCBSCCT----TCCCEECTTS
T ss_pred EEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC----CCceEEEEEEECCCCCCcCCcccCccc----ccceEEecCC
Confidence 665311 11 1578899999999999988643 455689999999999875121112211 2589999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--eeecCCC-
Q 002164 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP- 331 (958)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--~~~l~~~- 331 (958)
+.|+|+..+..+. +. ..+ .....+||++++ ++. .+.+...
T Consensus 180 ~~l~~~~~d~~~~---------~~----------------------~~~-----~~~~~~v~~~~l~t~~~~~~lv~~~~ 223 (695)
T 2bkl_A 180 KGFYYEWLPTDPS---------IK----------------------VDE-----RPGYTTIRYHTLGTEPSKDTVVHERT 223 (695)
T ss_dssp SEEEEEECCCCTT---------SC----------------------GGG-----GGGGCEEEEEETTSCGGGCEEEECCC
T ss_pred CEEEEEEecCCCC---------Cc----------------------ccc-----CCCCCEEEEEECCCCchhceEEEecC
Confidence 9999985432111 00 000 003467999999 664 2344432
Q ss_pred ---ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeec
Q 002164 332 ---AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS 408 (958)
Q Consensus 332 ---~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp 408 (958)
..+..+.|||||++|++.+.... ...++++++..++..+.|+... .....+.| +
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~~~---------~~~~l~~~~~~~~~~~~l~~~~-------------~~~~~~~~-~ 280 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILRGW---------SENDVYWKRPGEKDFRLLVKGV-------------GAKYEVHA-W 280 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEETT---------TEEEEEEECTTCSSCEEEEECS-------------SCCEEEEE-E
T ss_pred CCCEEEEEEEECCCCCEEEEEEeCCC---------CceEEEEEcCCCCceEEeecCC-------------CceEEEEe-c
Confidence 34568899999999999986531 1347888887666677766432 12234445 7
Q ss_pred CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCc---eEEEee--ccccCceeeecCCceEEEEEeccccceEE
Q 002164 409 DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKL--DLRYGGISWCDDSLALVYESWYKTRRTRT 483 (958)
Q Consensus 409 DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~--~~~~~~~~~spDg~~l~~~~~~~~~~~~l 483 (958)
||+ +++.++.. .....|+++++ +++.. +.+... ...+..+.|+ + ..|++....++ ..+|
T Consensus 281 ~g~-l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~l~~~~~~-~-~~lv~~~~~dg-~~~l 344 (695)
T 2bkl_A 281 KDR-FYVLTDEG---------APRQRVFEVDP---AKPARASWKEIVPEDSSASLLSVSIV-G-GHLSLEYLKDA-TSEV 344 (695)
T ss_dssp TTE-EEEEECTT---------CTTCEEEEEBT---TBCSGGGCEEEECCCSSCEEEEEEEE-T-TEEEEEEEETT-EEEE
T ss_pred CCc-EEEEECCC---------CCCCEEEEEeC---CCCCccCCeEEecCCCCCeEEEEEEE-C-CEEEEEEEECC-EEEE
Confidence 888 77753321 23567999985 44442 556543 3345667887 4 45666555443 3789
Q ss_pred EEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc
Q 002164 484 WVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (958)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~ 563 (958)
|+++++++ ....+.-.....+.. ++++|||+.+++..... .....||+||+++++
T Consensus 345 ~~~~~~g~--~~~~l~~~~~~~v~~------~~~s~d~~~l~~~~ss~-----------------~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 345 RVATLKGK--PVRTVQLPGVGAASN------LMGLEDLDDAYYVFTSF-----------------TTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEETTCC--EEEECCCSSSSEECC------CBSCTTCSEEEEEEEET-----------------TEEEEEEEEETTTCC
T ss_pred EEEeCCCC--eeEEecCCCCeEEEE------eecCCCCCEEEEEEcCC-----------------CCCCEEEEEECCCCc
Confidence 99998653 222221111112222 66899999988876431 122469999999998
Q ss_pred eEEEecCC
Q 002164 564 KERIWESD 571 (958)
Q Consensus 564 ~~~l~~~~ 571 (958)
.+.+....
T Consensus 400 ~~~l~~~~ 407 (695)
T 2bkl_A 400 SELWAKVD 407 (695)
T ss_dssp EEEEEECC
T ss_pred EEEEecCC
Confidence 87776543
No 78
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.80 E-value=6.4e-18 Score=179.11 Aligned_cols=225 Identities=17% Similarity=0.115 Sum_probs=152.5
Q ss_pred CCCcEEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC--
Q 002164 635 ASLQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-- 711 (958)
Q Consensus 635 ~~~~~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-- 711 (958)
...+.+.+++.+. +|..+.+.+|+|+++++. +++|+||++||+......+ ..........+..|+++
T Consensus 28 ~~g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~--~~~P~vv~lHG~g~~~~~~--------~~~~~~~~~~~~~l~~~g~ 97 (268)
T 1jjf_A 28 PRGQVVNISYFSTATNSTRPARVYLPPGYSKD--KKYSVLYLLHGIGGSENDW--------FEGGGRANVIADNLIAEGK 97 (268)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEECTTCCTT--SCBCEEEEECCTTCCTTTT--------TTTTTCHHHHHHHHHHTTS
T ss_pred CCceEEEEEEeccccCCceEEEEEeCCCCCCC--CCccEEEEECCCCCCcchh--------hhccccHHHHHHHHHHcCC
Confidence 3445677888765 678999999999987543 3599999999975322110 01101112235567776
Q ss_pred --CcEEEEcCCCCCCCCCCcccchhhHHHHHHH-HHHHHHHHHHcCCC--CCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 002164 712 --GFAILGGPTTPIIGEGDEEANDRFVEQLVAC-AEAAVEEVVRRGVA--HPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (958)
Q Consensus 712 --G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D-~~~av~~l~~~~~~--d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a 786 (958)
||+|+.+++++. +... ...+ .....+ +.++++++.++..+ |+++++|+|+|+||++|+.++.++|++|++
T Consensus 98 ~~~~~vv~~d~~~~---~~~~-~~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~ 172 (268)
T 1jjf_A 98 IKPLIIVTPNTNAA---GPGI-ADGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAY 172 (268)
T ss_dssp SCCCEEEEECCCCC---CTTC-SCHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSE
T ss_pred CCCEEEEEeCCCCC---Cccc-cccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhh
Confidence 599999776532 2211 1112 223333 55677777766444 889999999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCC-CEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcE
Q 002164 787 GIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKK-PILLVHGEEDNNSGTLTMQSDRFFNALKGHGALC 865 (958)
Q Consensus 787 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~-P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 865 (958)
+++++|..+.... ...+.... .....+. |+|++||++|..+| . +++++++|+..|+++
T Consensus 173 ~v~~s~~~~~~~~--------~~~~~~~~---------~~~~~~~pp~li~~G~~D~~v~--~--~~~~~~~l~~~g~~~ 231 (268)
T 1jjf_A 173 IGPISAAPNTYPN--------ERLFPDGG---------KAAREKLKLLFIACGTNDSLIG--F--GQRVHEYCVANNINH 231 (268)
T ss_dssp EEEESCCTTSCCH--------HHHCTTTT---------HHHHHHCSEEEEEEETTCTTHH--H--HHHHHHHHHHTTCCC
T ss_pred eEEeCCCCCCCch--------hhhcCcch---------hhhhhcCceEEEEecCCCCCcc--H--HHHHHHHHHHCCCce
Confidence 9999997553210 00010000 0001234 49999999999875 3 778999999999999
Q ss_pred EEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 866 RLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 866 ~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
++.+||+++|.+. .....+..+++||.++.
T Consensus 232 ~~~~~~g~~H~~~---~~~~~~~~~~~~l~~~~ 261 (268)
T 1jjf_A 232 VYWLIQGGGHDFN---VWKPGLWNFLQMADEAG 261 (268)
T ss_dssp EEEEETTCCSSHH---HHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCcCHh---HHHHHHHHHHHHHHhcC
Confidence 9999999999873 23455678899998874
No 79
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.80 E-value=8.8e-19 Score=210.52 Aligned_cols=245 Identities=19% Similarity=0.216 Sum_probs=165.2
Q ss_pred EeCCCeE--EEEEEEecCCCCCCCCCCceEEEEECCCCCcCcc---------c--------CC-----------------
Q 002164 645 QRKDGVQ--LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKD---------A--------AG----------------- 688 (958)
Q Consensus 645 ~~~dg~~--l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~---------~--------~~----------------- 688 (958)
+..||.+ |.+.+|+|++. +++|+||..||....... . .+
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~-----~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 253 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST-----EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAK 253 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS-----SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCCC-----CcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccc
Confidence 4679999 99999999862 359999987763221100 0 00
Q ss_pred ---cccCCCCCCCCc-CcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc-hhhHHHHHHHHHHHHHHHHHc----------
Q 002164 689 ---QVRGSPNEFPRI-GSTSVLLWLARGFAILGGPTTPIIGEGDEEAN-DRFVEQLVACAEAAVEEVVRR---------- 753 (958)
Q Consensus 689 ---~~~~~~~~~~~~-~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~-~~~~~~~~~D~~~av~~l~~~---------- 753 (958)
....+...|... .......|+++||+|+. .+.+|+|.+.+. ..+.....+|+.++++||.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~---~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 254 ELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIY---VAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEE---ECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccccchhccccccccchHHHHHHCCCEEEE---ECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 000000111110 12345789999999999 455566666543 223346789999999999853
Q ss_pred -----CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC---------CCCCccccc---------chh
Q 002164 754 -----GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL---------TPFGFQNED---------RTL 810 (958)
Q Consensus 754 -----~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~---------~~~~~~~~~---------~~~ 810 (958)
++ +..||+++|+||||++++.+|+++|+.++++|+.+|+.++.. ...++.... ...
T Consensus 331 ~~v~q~~-~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~ 409 (763)
T 1lns_A 331 HEIKASW-ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRN 409 (763)
T ss_dssp CEECCTT-EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGG
T ss_pred ccccccC-CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhh
Confidence 33 457999999999999999999999999999999998764210 000110000 000
Q ss_pred hh------------c----------------HHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCC
Q 002164 811 WE------------A----------------TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG 862 (958)
Q Consensus 811 ~~------------~----------------~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g 862 (958)
+. . ...|...++...+++|++|+|++||.+|.+|| +.++.+++++++. +
T Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp--~~~a~~l~~al~~-~ 486 (763)
T 1lns_A 410 LDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVT--PEQAYNFWKALPE-G 486 (763)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSC--THHHHHHHHHSCT-T
T ss_pred cCcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCC--hHHHHHHHHhhcc-C
Confidence 00 0 01233456778889999999999999999998 9999999999987 7
Q ss_pred CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhccCC
Q 002164 863 ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 863 ~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
.++++++ ++++|..........+.+.+.+||++||++..
T Consensus 487 ~~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~~ 525 (763)
T 1lns_A 487 HAKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLLDRD 525 (763)
T ss_dssp CCEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHTTCC
T ss_pred CCeEEEE-eCCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 7777766 45699864322233467899999999998653
No 80
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.80 E-value=3.1e-18 Score=180.91 Aligned_cols=205 Identities=17% Similarity=0.149 Sum_probs=153.3
Q ss_pred CcEEEEEEEeC--CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcE
Q 002164 637 LQKELIKYQRK--DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (958)
Q Consensus 637 ~~~~~~~~~~~--dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (958)
+..+.++++.. ++. ..+.+|+|.... +++.|+||++||..... ..| ...+..|+++||.
T Consensus 23 ~~~~~~~~~~~~~~~~-~~~~l~~p~~~~---~~~~p~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~ 83 (262)
T 1jfr_A 23 YATSQTSVSSLVASGF-GGGTIYYPTSTA---DGTFGAVVISPGFTAYQ-----------SSI----AWLGPRLASQGFV 83 (262)
T ss_dssp SCEEEEEECTTTCSSS-CCEEEEEESCCT---TCCEEEEEEECCTTCCG-----------GGT----TTHHHHHHTTTCE
T ss_pred CCccceEecceeccCC-CceeEEecCCCC---CCCCCEEEEeCCcCCCc-----------hhH----HHHHHHHHhCCCE
Confidence 34555666654 332 246778886521 23589999999964211 111 2346678899999
Q ss_pred EEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEe
Q 002164 715 ILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVR----RGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIAR 790 (958)
Q Consensus 715 vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~ 790 (958)
|+.+++ +|+|.+. .....|+.++++++.+ ...++.++++++|||+||.+++.++.++|+ ++++|++
T Consensus 84 v~~~d~---~g~g~~~------~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~ 153 (262)
T 1jfr_A 84 VFTIDT---NTTLDQP------DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPL 153 (262)
T ss_dssp EEEECC---SSTTCCH------HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEE
T ss_pred EEEeCC---CCCCCCC------chhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEee
Confidence 999555 5666442 2445688899999988 445677899999999999999999999987 8999998
Q ss_pred ccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHH-HHHHHHHHHhCCCcEEEEE
Q 002164 791 SGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ-SDRFFNALKGHGALCRLVI 869 (958)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~~~~ 869 (958)
+|... ...+.++++|+|++||++|..++ ++. ++++++.++ .+.++++++
T Consensus 154 ~p~~~---------------------------~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~l~-~~~~~~~~~ 203 (262)
T 1jfr_A 154 TGWNT---------------------------DKTWPELRTPTLVVGADGDTVAP--VATHSKPFYESLP-GSLDKAYLE 203 (262)
T ss_dssp SCCCS---------------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHHSC-TTSCEEEEE
T ss_pred cccCc---------------------------cccccccCCCEEEEecCccccCC--chhhHHHHHHHhh-cCCCceEEE
Confidence 87421 23345678999999999999998 888 999999884 356899999
Q ss_pred eCCCCccCCCcccHHHHHHHHHHHHHHhhccC
Q 002164 870 LPFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 870 ~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
+++++|.+.. +....+.+.+.+||++++...
T Consensus 204 ~~~~~H~~~~-~~~~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 204 LRGASHFTPN-TSDTTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp ETTCCTTGGG-SCCHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCcCCcc-cchHHHHHHHHHHHHHHhcCc
Confidence 9999999753 334678899999999998754
No 81
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.80 E-value=1e-18 Score=189.84 Aligned_cols=232 Identities=18% Similarity=0.137 Sum_probs=160.0
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC-CcEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAI 715 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~v 715 (958)
...+.+++++.+| .+.+++|.|.+ ..+.|+||++||+++..+ +...+ ...+..|+++ ||.|
T Consensus 46 ~~~~~~~i~~~~g-~i~~~~~~p~~-----~~~~p~vv~~HGgg~~~g--------~~~~~----~~~~~~la~~~g~~v 107 (311)
T 2c7b_A 46 AETRDVHIPVSGG-SIRARVYFPKK-----AAGLPAVLYYHGGGFVFG--------SIETH----DHICRRLSRLSDSVV 107 (311)
T ss_dssp SEEEEEEEEETTE-EEEEEEEESSS-----CSSEEEEEEECCSTTTSC--------CTGGG----HHHHHHHHHHHTCEE
T ss_pred ceEEEEEecCCCC-cEEEEEEecCC-----CCCCcEEEEECCCcccCC--------Chhhh----HHHHHHHHHhcCCEE
Confidence 4678889998777 89999999975 123799999999753221 11111 2345677775 9999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCC----ceeEEE
Q 002164 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPH----LFCCGI 788 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~----~~~a~v 788 (958)
+.++++ |+|.+. ++....|+.++++|+.++. .+|+++|+|+|+|+||++++.++.+.|+ +++++|
T Consensus 108 ~~~d~r---g~g~~~-----~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v 179 (311)
T 2c7b_A 108 VSVDYR---LAPEYK-----FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQV 179 (311)
T ss_dssp EEECCC---CTTTSC-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEE
T ss_pred EEecCC---CCCCCC-----CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEE
Confidence 996554 555442 2356788999999998862 3678899999999999999999987654 599999
Q ss_pred EeccCCCCCCCCC-----------Cccccc--chhhhc----H--HHHHhcCcccc-cCCCCCCEEEEeeCCCCCCCCCh
Q 002164 789 ARSGAYNRTLTPF-----------GFQNED--RTLWEA----T--STYVEMSPFMS-ANKLKKPILLVHGEEDNNSGTLT 848 (958)
Q Consensus 789 ~~~~~~~~~~~~~-----------~~~~~~--~~~~~~----~--~~~~~~sp~~~-~~~~~~P~Lii~G~~D~~v~~~~ 848 (958)
+.+|..+...... .+.... ...+.. . ......+|+.. +..+ .|+||+||++|..+
T Consensus 180 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~---- 254 (311)
T 2c7b_A 180 LIYPVVNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLR---- 254 (311)
T ss_dssp EESCCCCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEETTCTTH----
T ss_pred EECCccCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcCCCCch----
Confidence 9999877311000 000000 000000 0 00011233322 2333 39999999999875
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHhhc
Q 002164 849 MQSDRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 849 ~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~~~i~~fl~~~l~ 899 (958)
..+..++++++..+.+++++++|+++|.+.. .+....+.+.+.+||.+++.
T Consensus 255 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 255 DEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 3567788999999999999999999998752 34557888999999999874
No 82
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.79 E-value=2.2e-18 Score=181.99 Aligned_cols=240 Identities=14% Similarity=0.022 Sum_probs=155.7
Q ss_pred CcEEEEEEEeC-CCeEEEEEEEecCCCCC--CCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCc
Q 002164 637 LQKELIKYQRK-DGVQLSATLYLPPGYDP--SKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (958)
Q Consensus 637 ~~~~~~~~~~~-dg~~l~~~l~~P~~~~~--~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (958)
|..+.+++.+. .|..+.+++|+|++++. ..++++|+||++||+.... ..+.... .....+.+.||
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~-----------~~~~~~~-~~~~~~~~~~~ 72 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNH-----------NSWLKRT-NVERLLRGTNL 72 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCT-----------THHHHHS-CHHHHTTTCCC
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCH-----------HHHHhcc-CHHHHHhcCCe
Confidence 45677777754 68899999999988621 1123589999999974221 1111000 11223345799
Q ss_pred EEEEcCCCCCCCCCCccc--chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEec
Q 002164 714 AILGGPTTPIIGEGDEEA--NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (958)
Q Consensus 714 ~vl~~~~~~~~G~G~~~~--~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (958)
+|+.+++. +.+.... ...+.....+|+...++.+..+..+|+++++|+|||+||++|+.++. +|++|+++|+++
T Consensus 73 ~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~ 148 (263)
T 2uz0_A 73 IVVMPNTS---NGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFS 148 (263)
T ss_dssp EEEECCCT---TSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEES
T ss_pred EEEEECCC---CCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEec
Confidence 99985553 3332221 22334555667777666654434568899999999999999999999 889999999999
Q ss_pred cCCCCCCCCCCccc-ccch----hhh--cHHHHHhcCcccccCCCC--CCEEEEeeCCCCCCCCChHHHHHHHHHHHhCC
Q 002164 792 GAYNRTLTPFGFQN-EDRT----LWE--ATSTYVEMSPFMSANKLK--KPILLVHGEEDNNSGTLTMQSDRFFNALKGHG 862 (958)
Q Consensus 792 ~~~~~~~~~~~~~~-~~~~----~~~--~~~~~~~~sp~~~~~~~~--~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g 862 (958)
|..+.......... .... .+. ....+...+|...+.+++ +|+|++||++|..+ ..+++++++|+..|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v----~~~~~~~~~l~~~g 224 (263)
T 2uz0_A 149 GALSFQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY----EANNLAVKNLKKLG 224 (263)
T ss_dssp CCCCSSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH----HHHHHHHHHHHHTT
T ss_pred CCcchhhccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhh----HHHHHHHHHHHHCC
Confidence 98765431100000 0000 000 001223345555555564 79999999999875 35789999999999
Q ss_pred CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhcc
Q 002164 863 ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 863 ~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
.+++++++|| +|.+. .....+..+++||.++++.
T Consensus 225 ~~~~~~~~~g-~H~~~---~~~~~~~~~~~~l~~~l~~ 258 (263)
T 2uz0_A 225 FDVTYSHSAG-THEWY---YWEKQLEVFLTTLPIDFKL 258 (263)
T ss_dssp CEEEEEEESC-CSSHH---HHHHHHHHHHHHSSSCCCC
T ss_pred CCeEEEECCC-CcCHH---HHHHHHHHHHHHHHhhccc
Confidence 9999999999 99863 2345678889999888753
No 83
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.79 E-value=2e-18 Score=191.29 Aligned_cols=238 Identities=15% Similarity=0.072 Sum_probs=163.2
Q ss_pred CCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEE
Q 002164 636 SLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (958)
Q Consensus 636 ~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~v 715 (958)
.+..+.++++..+|..+.+.+|.|.+.. .+.|+||++|||.+..+. .. ..........|+++||+|
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~~----~~~p~vv~iHGgg~~~g~--------~~--~~~~~~~~~~la~~g~~v 144 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGVE----GVLPGLVYTHGGGMTILT--------TD--NRVHRRWCTDLAAAGSVV 144 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTCC----SCEEEEEEECCSTTTSSC--------SS--SHHHHHHHHHHHHTTCEE
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCCC----CCCeEEEEEcCCccccCC--------Cc--ccchhHHHHHHHhCCCEE
Confidence 3456778888888889999999997621 248999999998643221 11 001123466788899999
Q ss_pred EEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh-----CCCceeEE
Q 002164 716 LGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAH-----APHLFCCG 787 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~-----~p~~~~a~ 787 (958)
+.+++++..|. . +...+...+.|+.++++|+.++. .+| +|+|+|+|+||.+++.++.+ .|++++++
T Consensus 145 v~~d~r~~gg~---~-~~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~ 218 (361)
T 1jkm_A 145 VMVDFRNAWTA---E-GHHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGV 218 (361)
T ss_dssp EEEECCCSEET---T-EECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEE
T ss_pred EEEecCCCCCC---C-CCCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceE
Confidence 99776644322 1 22223566789999999998862 244 99999999999999999998 77789999
Q ss_pred EEeccCCCCCCCC---------CCcccccchhhhc--H----HHH---------HhcCcc----cccCCCCCCEEEEeeC
Q 002164 788 IARSGAYNRTLTP---------FGFQNEDRTLWEA--T----STY---------VEMSPF----MSANKLKKPILLVHGE 839 (958)
Q Consensus 788 v~~~~~~~~~~~~---------~~~~~~~~~~~~~--~----~~~---------~~~sp~----~~~~~~~~P~Lii~G~ 839 (958)
|+.+|..+..... ..+.......+.. . ..| ...+|+ ..+.++. |+||+||+
T Consensus 219 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~ 297 (361)
T 1jkm_A 219 YASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNE 297 (361)
T ss_dssp EEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEET
T ss_pred EEECCccccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcC
Confidence 9999987752110 0000000000000 0 000 012333 2345565 99999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCC-C----cccH-HHHHHHHHHHHHHhh
Q 002164 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA-A----RESI-MHVLWETDRWLQKYC 898 (958)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~-~----~~~~-~~~~~~i~~fl~~~l 898 (958)
+|..+ .++.+++++|+..|.+++++++|+++|.+. . .+.. ..+.+.+.+||+++.
T Consensus 298 ~D~~~----~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 298 LDPLR----DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp TCTTH----HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcch----hhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99875 378899999999999999999999999875 2 1334 677889999998874
No 84
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=2.8e-17 Score=176.07 Aligned_cols=270 Identities=14% Similarity=0.137 Sum_probs=183.5
Q ss_pred CCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchh
Q 002164 216 SSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTF 295 (958)
Q Consensus 216 ~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 295 (958)
.....|+++++.+++.+.+...... +..++|+|||++|++.
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~-----v~~~~~spdg~~l~~~---------------------------------- 59 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPEL-----FEAPNWSPDGKYLLLN---------------------------------- 59 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSC-----CEEEEECTTSSEEEEE----------------------------------
T ss_pred CcceeEEEEeCCCCceeeeccCCcc-----eEeeEECCCCCEEEEE----------------------------------
Confidence 3467899999999988877665432 6789999999999987
Q ss_pred hhhccCchhhhHHHHhhcceEEEEEc-C-CeeeecCCC---ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEE
Q 002164 296 QDLLKDEYDEDLFDYYATTQLVLVSL-D-GTVKEIGPP---AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (958)
Q Consensus 296 ~d~~~~~~~~~~~~~~~~~~l~~~~~-~-g~~~~l~~~---~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l 370 (958)
....|+++++ + ++...+... ..+..+.|||||++|++...... ....|++
T Consensus 60 ----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---------~~~~l~~ 114 (297)
T 2ojh_A 60 ----------------SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---------GKSAIYL 114 (297)
T ss_dssp ----------------ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---------SSCEEEE
T ss_pred ----------------cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---------CcceEEE
Confidence 2346999999 7 777766643 45678999999999999884321 1347888
Q ss_pred EeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE
Q 002164 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (958)
Q Consensus 371 ~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (958)
++++++..+.+.... ....+.|+|||+.|++.... ...-.||.++. .+++.+.
T Consensus 115 ~~~~~~~~~~~~~~~--------------~~~~~~~spdg~~l~~~~~~----------~~~~~l~~~~~---~~~~~~~ 167 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNL--------------PSYWHGWSPDGKSFTYCGIR----------DQVFDIYSMDI---DSGVETR 167 (297)
T ss_dssp EETTCCCCEECCSSS--------------SEEEEEECTTSSEEEEEEEE----------TTEEEEEEEET---TTCCEEE
T ss_pred EECCCCceEEeecCC--------------CccceEECCCCCEEEEEECC----------CCceEEEEEEC---CCCcceE
Confidence 888777666655432 23567899999999875322 12235777774 5666677
Q ss_pred EEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeee
Q 002164 451 LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (958)
Q Consensus 451 l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~ 530 (958)
+......+..+.|+|||+.|++....++ ..+||.+++.++ ....+... ...+.. +.|+|||++|++....
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~~i~~~~~~~~--~~~~~~~~-~~~~~~------~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTG-QMQIWRVRVDGS--SVERITDS-AYGDWF------PHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTSS--CEEECCCC-SEEEEE------EEECTTSSEEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCCC-CccEEEECCCCC--CcEEEecC-CcccCC------eEECCCCCEEEEEEcC
Confidence 7666667788999999999999876443 378999987763 22333222 122222 7899999999988753
Q ss_pred ccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecC
Q 002164 531 ENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESK 605 (958)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~ 605 (958)
..... .+......|++||+++++.+.+....+. ......++|+|||+.+++.....
T Consensus 238 ~~~~~----------~~~~~~~~l~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 238 ADVFD----------HPRDLDVRVQLMDMDGGNVETLFDLFGG---------QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTCCS----------CCSSEEEEEEEEETTSCSCEEEEEEEES---------TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCc----------ccccCceEEEEEecCCCCceeeeccCCC---------CcccccceECCCCCEEEEEEecc
Confidence 21000 0000124699999999887776542111 01112368999999998877654
No 85
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.78 E-value=1.2e-17 Score=179.64 Aligned_cols=228 Identities=18% Similarity=0.158 Sum_probs=159.6
Q ss_pred EEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCC
Q 002164 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (958)
Q Consensus 643 ~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~ 722 (958)
.+.+.+|.+++++++.|.+ .+.|+||++||..... . .....+..|+++||.|++ .+
T Consensus 21 ~~~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~~-----------~----~~~~~~~~l~~~g~~v~~---~d 76 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG------TPKALIFVSHGAGEHS-----------G----RYEELARMLMGLDLLVFA---HD 76 (303)
T ss_dssp EEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG-----------G----GGHHHHHHHHHTTEEEEE---EC
T ss_pred eEecCCCeEEEEEEeccCC------CCCeEEEEECCCCchh-----------h----HHHHHHHHHHhCCCcEEE---eC
Confidence 6778899999999998863 2379999999964211 1 112456678889999999 55
Q ss_pred CCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC
Q 002164 723 IIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT 799 (958)
Q Consensus 723 ~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~ 799 (958)
.+|+|.+.... ......++|+.++++++..+ .+.++++++|||+||.+++.++.++|++++++|+++|.......
T Consensus 77 ~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 154 (303)
T 3pe6_A 77 HVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE 154 (303)
T ss_dssp CTTSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchh
Confidence 56777765321 23467789999999999887 34569999999999999999999999999999999987542100
Q ss_pred ------------------CCCccccc-chhhhcH---HHHH---------------------hcCcccccCCCCCCEEEE
Q 002164 800 ------------------PFGFQNED-RTLWEAT---STYV---------------------EMSPFMSANKLKKPILLV 836 (958)
Q Consensus 800 ------------------~~~~~~~~-~~~~~~~---~~~~---------------------~~sp~~~~~~~~~P~Lii 836 (958)
........ ....... ..+. .......+.++++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 234 (303)
T 3pe6_A 155 SATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLL 234 (303)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEE
T ss_pred ccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEE
Confidence 00000000 0000000 0000 001123466789999999
Q ss_pred eeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc--ccHHHHHHHHHHHHHHhhcc
Q 002164 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR--ESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~--~~~~~~~~~i~~fl~~~l~~ 900 (958)
+|++|..++ +..+.++++.++. ..+++++++++||.+... +....+...+++||.+++..
T Consensus 235 ~g~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 235 QGSADRLCD--SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp EETTCSSBC--HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred eeCCCCCCC--hHHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 999999998 8888888887653 258999999999987432 33557788899999998753
No 86
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.78 E-value=2.4e-18 Score=186.14 Aligned_cols=193 Identities=19% Similarity=0.155 Sum_probs=149.3
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.. .+.+|+|.+.. +.|+||++||+.... .........|+++||.|+.+++ +|+
T Consensus 79 ~~g~~-~~~~~~p~~~~-----~~p~vv~~HG~~~~~---------------~~~~~~~~~la~~G~~vv~~d~---~g~ 134 (306)
T 3vis_A 79 ADGFG-GGTIYYPRENN-----TYGAIAISPGYTGTQ---------------SSIAWLGERIASHGFVVIAIDT---NTT 134 (306)
T ss_dssp CSSSC-CEEEEEESSCS-----CEEEEEEECCTTCCH---------------HHHHHHHHHHHTTTEEEEEECC---SST
T ss_pred cCCCc-ceEEEeeCCCC-----CCCEEEEeCCCcCCH---------------HHHHHHHHHHHhCCCEEEEecC---CCC
Confidence 34443 35778887521 489999999964211 0112456678899999999554 566
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC
Q 002164 727 GDEEANDRFVEQLVACAEAAVEEVVRR------GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (958)
Q Consensus 727 G~~~~~~~~~~~~~~D~~~av~~l~~~------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~ 800 (958)
|.+. .....|+.++++|+.++ ..+|.++|+++|||+||.+++.++.++|+ ++++|+++|...
T Consensus 135 g~s~------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~----- 202 (306)
T 3vis_A 135 LDQP------DSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL----- 202 (306)
T ss_dssp TCCH------HHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----
T ss_pred CCCc------chHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC-----
Confidence 6552 23447889999999997 67888999999999999999999999976 999999887532
Q ss_pred CCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChH-HHHHHHHHHHhCCCcEEEEEeCCCCccCCC
Q 002164 801 FGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTM-QSDRFFNALKGHGALCRLVILPFESHGYAA 879 (958)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~-~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~ 879 (958)
...+.++++|+|++||++|..+| +. +++++++.++..+ +++++++++++|.+..
T Consensus 203 ----------------------~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~ 257 (306)
T 3vis_A 203 ----------------------NKSWRDITVPTLIIGAEYDTIAS--VTLHSKPFYNSIPSPT-DKAYLELDGASHFAPN 257 (306)
T ss_dssp ----------------------CCCCTTCCSCEEEEEETTCSSSC--TTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGG
T ss_pred ----------------------ccccccCCCCEEEEecCCCcccC--cchhHHHHHHHhccCC-CceEEEECCCCccchh
Confidence 12345678999999999999998 77 6999999988766 8999999999999753
Q ss_pred cccHHHHHHHHHHHHHHhhccC
Q 002164 880 RESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 880 ~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
+....+.+.+.+||++++...
T Consensus 258 -~~~~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 258 -ITNKTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp -SCCHHHHHHHHHHHHHHHSCC
T ss_pred -hchhHHHHHHHHHHHHHccCc
Confidence 333677889999999998754
No 87
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=3.5e-16 Score=175.58 Aligned_cols=355 Identities=14% Similarity=0.077 Sum_probs=215.7
Q ss_pred eceeEEEccCCCCCCce-eeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcc
Q 002164 163 TGIGIHQLFPDGKLGQE-IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY 241 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~-~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~ 241 (958)
+.|++|++.+ ++. +.+. .+..+..++|||||++|+++.. ....|+++++.+++.......+..
T Consensus 12 ~~v~v~d~~~----~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~--------~d~~i~v~d~~~~~~~~~~~~~~~- 75 (391)
T 1l0q_A 12 DNISVIDVTS----NKVTATIP---VGSNPMGAVISPDGTKVYVANA--------HSNDVSIIDTATNNVIATVPAGSS- 75 (391)
T ss_dssp TEEEEEETTT----TEEEEEEE---CSSSEEEEEECTTSSEEEEEEG--------GGTEEEEEETTTTEEEEEEECSSS-
T ss_pred CEEEEEECCC----CeEEEEee---cCCCcceEEECCCCCEEEEECC--------CCCeEEEEECCCCeEEEEEECCCC-
Confidence 4789999854 332 2332 2235788999999999877642 246899999998887665544442
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc
Q 002164 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (958)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 321 (958)
+..++|+|||+.|+++.. ....|+++++
T Consensus 76 ----v~~~~~spdg~~l~~~~~------------------------------------------------~~~~v~v~d~ 103 (391)
T 1l0q_A 76 ----PQGVAVSPDGKQVYVTNM------------------------------------------------ASSTLSVIDT 103 (391)
T ss_dssp ----EEEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEET
T ss_pred ----ccceEECCCCCEEEEEEC------------------------------------------------CCCEEEEEEC
Confidence 678999999999887610 1246889998
Q ss_pred -CCeeeecCC-CccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCccccccccc
Q 002164 322 -DGTVKEIGP-PAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRK 399 (958)
Q Consensus 322 -~g~~~~l~~-~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~ 399 (958)
+++...... ...+..++|+|||++|+++... .+.|++||+.+++........ .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~-------------~ 158 (391)
T 1l0q_A 104 TSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG------------DKTVSVINTVTKAVINTVSVG-------------R 158 (391)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSSEEEEEETT------------TTEEEEEETTTTEEEEEEECC-------------S
T ss_pred CCCeEEEEEeCCCCcceEEECCCCCEEEEEeCC------------CCEEEEEECCCCcEEEEEecC-------------C
Confidence 776544433 3567889999999999877633 348999999876554332211 2
Q ss_pred CcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEecccc
Q 002164 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTR 479 (958)
Q Consensus 400 ~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~ 479 (958)
.+..+.|+|||+.+++. ....+.|++||+ .+++..........+..+.|+|||+.|+.......
T Consensus 159 ~~~~~~~~~dg~~l~~~------------~~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~- 222 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVA------------NFDSMSISVIDT---VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKY- 222 (391)
T ss_dssp SEEEEEECTTSSEEEEE------------ETTTTEEEEEET---TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSS-
T ss_pred CcceEEECCCCCEEEEE------------eCCCCEEEEEEC---CCCeEEEEEecCCCccceEECCCCCEEEEEecCcC-
Confidence 34678999999988663 123467999996 44444444444455677899999999988865211
Q ss_pred ceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEEC
Q 002164 480 RTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDI 559 (958)
Q Consensus 480 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl 559 (958)
...|+++++.++ +......... .... +.|+|||++|++... ....|++||+
T Consensus 223 ~~~v~~~d~~~~--~~~~~~~~~~-~~~~------~~~s~dg~~l~~s~~--------------------~d~~v~v~d~ 273 (391)
T 1l0q_A 223 FNTVSMIDTGTN--KITARIPVGP-DPAG------IAVTPDGKKVYVALS--------------------FXNTVSVIDT 273 (391)
T ss_dssp CCEEEEEETTTT--EEEEEEECCS-SEEE------EEECTTSSEEEEEET--------------------TTTEEEEEET
T ss_pred CCcEEEEECCCC--eEEEEEecCC-CccE------EEEccCCCEEEEEcC--------------------CCCEEEEEEC
Confidence 246888888774 2222222221 1122 789999998876641 1136999999
Q ss_pred CCCceEEEecCCccccc-ceeEeecCCC---ccccccccC--------CEEEEEEecCCCCceEEEEECCCCCeeEeecC
Q 002164 560 NTGSKERIWESDKEKYY-ETTVALMSDQ---TEGDLYLNQ--------LKILTSKESKTENTQYYIQSWPDKKSCQITDF 627 (958)
Q Consensus 560 ~~g~~~~l~~~~~~~~~-~~~~~~~~~~---~~~~~s~dg--------~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~~ 627 (958)
++++...........+. .......... ....|+.+. ..+.+. +.......|+|+..+|......
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~--~~~~~~~~~~W~~~~g~~~~~~-- 349 (391)
T 1l0q_A 274 ATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFT--DLSKDATEWKWDFGDGSSSKKQ-- 349 (391)
T ss_dssp TTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEE--ECCBSCSEEEEECSSSCEECSS--
T ss_pred CCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEE--eCCCCceEEEEECCCCcccCcC--
Confidence 98887665443322110 0000000000 012233322 113333 2233456889998887643221
Q ss_pred CCCCCCCCC--CcEEEEEEEeCCC--eEEEEEEEecC
Q 002164 628 PHPYPQLAS--LQKELIKYQRKDG--VQLSATLYLPP 660 (958)
Q Consensus 628 ~~~~~~~~~--~~~~~~~~~~~dg--~~l~~~l~~P~ 660 (958)
+ +...+.. .-...+++.+.+| .++....+.++
T Consensus 350 ~-~~~~~~~~g~y~~~~~~~~~~g~~~~~~~~~v~~~ 385 (391)
T 1l0q_A 350 N-PTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLK 385 (391)
T ss_dssp S-CEECCSSCEEEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred C-CeEEeCCCceEEEEEEEECCCCcEEEEEEEEEEcC
Confidence 1 1112222 2244667788888 35666666654
No 88
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.78 E-value=1.9e-18 Score=174.86 Aligned_cols=184 Identities=13% Similarity=0.074 Sum_probs=125.1
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCccc-----chhhHHHHHHHH
Q 002164 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA-----NDRFVEQLVACA 743 (958)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~-----~~~~~~~~~~D~ 743 (958)
..++||++||..... ..+. ..+..|...||.|++++..+..+++.... ...........+
T Consensus 21 a~~~Vv~lHG~G~~~-----------~~~~----~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i 85 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTA-----------ADII----SLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALV 85 (210)
T ss_dssp CSEEEEEECCTTCCH-----------HHHH----GGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCH-----------HHHH----HHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHH
Confidence 368999999942110 0110 11234455899999977654433332211 112233334445
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcc
Q 002164 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPF 823 (958)
Q Consensus 744 ~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 823 (958)
...++.+.+. .+|++||+|+|+|+||++|+.++.++|++|+++|+.+|........ . ...
T Consensus 86 ~~~~~~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~---------~-------~~~--- 145 (210)
T 4h0c_A 86 GEVVAEIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA---------I-------GNY--- 145 (210)
T ss_dssp HHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC---------G-------GGC---
T ss_pred HHHHHHHHHh-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh---------h-------hhh---
Confidence 5555555554 4799999999999999999999999999999999998743210000 0 000
Q ss_pred cccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
.....++|+|++||++|++|| ++.++++++.|+..|.++++.+||+++|.+.. +.++.+.+||.
T Consensus 146 -~~~~~~~Pvl~~hG~~D~~vp--~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~-----~el~~i~~wL~ 209 (210)
T 4h0c_A 146 -KGDFKQTPVFISTGNPDPHVP--VSRVQESVTILEDMNAAVSQVVYPGRPHTISG-----DEIQLVNNTIL 209 (210)
T ss_dssp -CBCCTTCEEEEEEEESCTTSC--HHHHHHHHHHHHHTTCEEEEEEEETCCSSCCH-----HHHHHHHHTTT
T ss_pred -hhhccCCceEEEecCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCcCH-----HHHHHHHHHHc
Confidence 011235799999999999999 99999999999999999999999999999852 23455666654
No 89
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.78 E-value=1.3e-17 Score=170.49 Aligned_cols=185 Identities=16% Similarity=0.106 Sum_probs=138.8
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH--CCcEEEEcCCC----------------CCCCCCCcc
Q 002164 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA--RGFAILGGPTT----------------PIIGEGDEE 730 (958)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~G~~vl~~~~~----------------~~~G~G~~~ 730 (958)
+.|+||++||.... ...| ......|++ +||.|++++.. +..|+|.+.
T Consensus 13 ~~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~ 77 (218)
T 1auo_A 13 ADACVIWLHGLGAD-----------RYDF----MPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR 77 (218)
T ss_dssp CSEEEEEECCTTCC-----------TTTT----HHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC
T ss_pred CCcEEEEEecCCCC-----------hhhH----HHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc
Confidence 48999999996421 1112 245667777 99999997642 344555432
Q ss_pred cc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCceeEEEEeccCCCCCCCCCCcccccc
Q 002164 731 AN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA-HAPHLFCCGIARSGAYNRTLTPFGFQNEDR 808 (958)
Q Consensus 731 ~~-~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~ 808 (958)
.. ........+|+..+++++.+ ..+++++++++|||+||.+++.++. ++|++++++|+++|..... . +.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~--~--~~---- 148 (218)
T 1auo_A 78 SISLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF--G--DE---- 148 (218)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC--C--TT----
T ss_pred ccchHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc--h--hh----
Confidence 22 23345667788888888876 3478889999999999999999999 9999999999999876530 0 00
Q ss_pred hhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHH
Q 002164 809 TLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLW 888 (958)
Q Consensus 809 ~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~ 888 (958)
......++++|+|++||++|..+| ++.++++++.++..|.++++++++ ++|.+. .+..+
T Consensus 149 -------------~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~ 207 (218)
T 1auo_A 149 -------------LELSASQQRIPALCLHGQYDDVVQ--NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL-----PQEIH 207 (218)
T ss_dssp -------------CCCCHHHHTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEES-CSSSCC-----HHHHH
T ss_pred -------------hhhhhcccCCCEEEEEeCCCceec--HHHHHHHHHHHHhCCCceEEEEec-CCCccC-----HHHHH
Confidence 000112457899999999999998 999999999999998899999999 999874 23467
Q ss_pred HHHHHHHHhh
Q 002164 889 ETDRWLQKYC 898 (958)
Q Consensus 889 ~i~~fl~~~l 898 (958)
.+.+||.+++
T Consensus 208 ~~~~~l~~~l 217 (218)
T 1auo_A 208 DIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8899999886
No 90
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.78 E-value=9.7e-18 Score=173.74 Aligned_cols=214 Identities=16% Similarity=0.109 Sum_probs=153.6
Q ss_pred EEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCC
Q 002164 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (958)
Q Consensus 644 ~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~ 723 (958)
+...+|.. .++|.|.+ +.|+||++||...... .| ...+..|+++||.|+++ +.
T Consensus 7 ~~~~~g~~--~~~~~~~~-------~~~~vv~~hG~~~~~~-----------~~----~~~~~~l~~~G~~v~~~---d~ 59 (238)
T 1ufo_A 7 RLTLAGLS--VLARIPEA-------PKALLLALHGLQGSKE-----------HI----LALLPGYAERGFLLLAF---DA 59 (238)
T ss_dssp EEEETTEE--EEEEEESS-------CCEEEEEECCTTCCHH-----------HH----HHTSTTTGGGTEEEEEC---CC
T ss_pred ccccCCEE--EEEEecCC-------CccEEEEECCCcccch-----------HH----HHHHHHHHhCCCEEEEe---cC
Confidence 33446654 45677754 3799999999642111 11 11233567889999994 45
Q ss_pred CCCCCcccch---h----------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEe
Q 002164 724 IGEGDEEAND---R----------FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIAR 790 (958)
Q Consensus 724 ~G~G~~~~~~---~----------~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~ 790 (958)
+|+|.+.... . ......+|+.++++++.+++. ++++++|||+||.+++.++.++|+++++++..
T Consensus 60 ~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 136 (238)
T 1ufo_A 60 PRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFI 136 (238)
T ss_dssp TTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEES
T ss_pred CCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEe
Confidence 5666653321 1 245678899999999988754 69999999999999999999999989998888
Q ss_pred ccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCC-CCCEEEEeeCCCCCCCCChHHHHHHHHHHH-hCCC-cEEE
Q 002164 791 SGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALK-GHGA-LCRL 867 (958)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~-~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~-~~g~-~~~~ 867 (958)
++..........+. .+ .....+...++...+.++ ++|+|++||++|..+| +..+.++++.++ ..|. ++++
T Consensus 137 ~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~ 209 (238)
T 1ufo_A 137 GSGFPMKLPQGQVV----ED-PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP--LARMEKTLEALRPHYPEGRLAR 209 (238)
T ss_dssp CCSSCCCCCTTCCC----CC-HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTT--HHHHHHHHHHHGGGCTTCCEEE
T ss_pred cCCccchhhhhhcc----CC-cccchhhcCChhhhhhhccCCcEEEEECCCCCccC--cHHHHHHHHHHhhcCCCCceEE
Confidence 76533221111100 00 113344556677777788 8999999999999998 899999999999 8877 8999
Q ss_pred EEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 868 VILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 868 ~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
+++++++|.+. .+..+.+.+||.+++.
T Consensus 210 ~~~~~~~H~~~-----~~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 210 FVEEGAGHTLT-----PLMARVGLAFLEHWLE 236 (238)
T ss_dssp EEETTCCSSCC-----HHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcccH-----HHHHHHHHHHHHHHHh
Confidence 99999999974 2456788899998875
No 91
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.78 E-value=1.2e-16 Score=175.07 Aligned_cols=301 Identities=9% Similarity=0.001 Sum_probs=195.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhc---------ccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCcee
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEEL---------ARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEI 180 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~ 180 (958)
.+..++|||||+.+++............ .++...+..+.+++++......+ ++.|.+|++..........
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~ 89 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVS 89 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSE
T ss_pred ceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeee
Confidence 4667889999999987765422222111 12334445667777665555444 6789999996532222222
Q ss_pred eeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeec--cCCCCccccccccceEEecCCeEE
Q 002164 181 EIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNNSTLL 258 (958)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~l--t~~~~~~~~~~~~~~~wspDG~~l 258 (958)
.+........+....|+|||+.|+.... ...|.+|++.+++.... ...... .+..++|+|||+.|
T Consensus 90 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l 156 (337)
T 1gxr_A 90 QLDCLNRDNYIRSCKLLPDGCTLIVGGE---------ASTLSIWDLAAPTPRIKAELTSSAP----ACYALAISPDSKVC 156 (337)
T ss_dssp EEECSCTTSBEEEEEECTTSSEEEEEES---------SSEEEEEECCCC--EEEEEEECSSS----CEEEEEECTTSSEE
T ss_pred cccccCCCCcEEEEEEcCCCCEEEEEcC---------CCcEEEEECCCCCcceeeecccCCC----ceEEEEECCCCCEE
Confidence 3321123357889999999999988652 56899999988763222 111221 16689999999998
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-cccc
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYT 335 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~ 335 (958)
+... ....|.++++ +++.. .+... ..+.
T Consensus 157 ~~~~-------------------------------------------------~dg~v~~~d~~~~~~~~~~~~~~~~i~ 187 (337)
T 1gxr_A 157 FSCC-------------------------------------------------SDGNIAVWDLHNQTLVRQFQGHTDGAS 187 (337)
T ss_dssp EEEE-------------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEEe-------------------------------------------------CCCcEEEEeCCCCceeeeeecccCceE
Confidence 8761 2245788888 66543 44433 6788
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceE
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
.++|+|||+.|+.... ++.+.+||+.++......... ..+..+.|+|||+.+++
T Consensus 188 ~~~~~~~~~~l~~~~~-------------dg~i~~~d~~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGL-------------DNTVRSWDLREGRQLQQHDFT-------------SQIFSLGYCPTGEWLAV 241 (337)
T ss_dssp EEEECTTSSEEEEEET-------------TSEEEEEETTTTEEEEEEECS-------------SCEEEEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEec-------------CCcEEEEECCCCceEeeecCC-------------CceEEEEECCCCCEEEE
Confidence 9999999999998773 348999999866544332211 34567999999998877
Q ss_pred EEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCc
Q 002164 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP 495 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 495 (958)
. ...+.+++|++ .+++...+......+..+.|+|||+.|+.....+ .|.++++..+ +.
T Consensus 242 ~-------------~~~~~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~~~~~~--~~ 299 (337)
T 1gxr_A 242 G-------------MESSNVEVLHV---NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYG--AS 299 (337)
T ss_dssp E-------------ETTSCEEEEET---TSSCEEEECCCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC--CE
T ss_pred E-------------cCCCcEEEEEC---CCCCeEEEcCCccceeEEEECCCCCEEEEecCCC----cEEEEECCCC--eE
Confidence 3 34567899996 5555556666667788899999999888765432 3666666664 22
Q ss_pred EEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 496 RILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
..... ....+.. +.|+|||++|+...
T Consensus 300 ~~~~~-~~~~v~~------~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 300 IFQSK-ESSSVLS------CDISVDDKYIVTGS 325 (337)
T ss_dssp EEEEE-CSSCEEE------EEECTTSCEEEEEE
T ss_pred EEEec-CCCcEEE------EEECCCCCEEEEec
Confidence 22221 2222222 78999999888776
No 92
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.77 E-value=3.3e-18 Score=180.65 Aligned_cols=200 Identities=16% Similarity=0.122 Sum_probs=147.8
Q ss_pred EEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCC
Q 002164 641 LIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT 720 (958)
Q Consensus 641 ~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~ 720 (958)
...++..+|..+.+.+|.|.+ ++.|+||++|||++..++ ...| ...+..|+++||.|+++++
T Consensus 40 ~~~i~~~~~~~~~~~~~~p~~------~~~p~vv~~HGgg~~~~~--------~~~~----~~~~~~l~~~G~~v~~~d~ 101 (262)
T 2pbl_A 40 RLNLSYGEGDRHKFDLFLPEG------TPVGLFVFVHGGYWMAFD--------KSSW----SHLAVGALSKGWAVAMPSY 101 (262)
T ss_dssp EEEEESSSSTTCEEEEECCSS------SCSEEEEEECCSTTTSCC--------GGGC----GGGGHHHHHTTEEEEEECC
T ss_pred ccccccCCCCCceEEEEccCC------CCCCEEEEEcCcccccCC--------hHHH----HHHHHHHHhCCCEEEEeCC
Confidence 344554566667778898864 237999999997532211 1112 1335578899999999666
Q ss_pred CCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC------CCceeEEEEeccCC
Q 002164 721 TPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA------PHLFCCGIARSGAY 794 (958)
Q Consensus 721 ~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~------p~~~~a~v~~~~~~ 794 (958)
+ |.+. .......+|+.++++++..+.. ++++|+|||+||.+++.++.+. |++++++|+++|++
T Consensus 102 ~---~~~~-----~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~ 170 (262)
T 2pbl_A 102 E---LCPE-----VRISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLS 170 (262)
T ss_dssp C---CTTT-----SCHHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCC
T ss_pred C---CCCC-----CChHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCcc
Confidence 4 4432 2356778999999999998753 6999999999999999999887 78999999999987
Q ss_pred CCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 002164 795 NRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFES 874 (958)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~ 874 (958)
+.......+ ...........+...+|...+.++++|+|++||++|..++ ++++.++++.++ ++++++|+++
T Consensus 171 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~-----~~~~~~~~~~ 241 (262)
T 2pbl_A 171 DLRPLLRTS--MNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF--LDQAIWLVEAWD-----ADHVIAFEKH 241 (262)
T ss_dssp CCGGGGGST--THHHHCCCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHH--HHHHHHHHHHHT-----CEEEEETTCC
T ss_pred CchHHHhhh--hhhhhCCCHHHHHhcCcccccCCCCCCEEEEEeCCCCccc--HHHHHHHHHHhC-----CeEEEeCCCC
Confidence 642111000 0111122345566778888888899999999999999988 899999999886 6899999999
Q ss_pred ccCC
Q 002164 875 HGYA 878 (958)
Q Consensus 875 H~~~ 878 (958)
|...
T Consensus 242 H~~~ 245 (262)
T 2pbl_A 242 HFNV 245 (262)
T ss_dssp TTTT
T ss_pred cchH
Confidence 9874
No 93
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.77 E-value=1.9e-17 Score=184.89 Aligned_cols=242 Identities=13% Similarity=0.074 Sum_probs=160.5
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
+..+.+++++.||..+.++.+.|........++.|+||++||.+.....+.... .....+..|+++||.|+
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~---------~~~~~a~~l~~~G~~vi 95 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNL---------PNNSLAFILADAGYDVW 95 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSC---------TTTCHHHHHHHTTCEEE
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCC---------CcccHHHHHHHCCCCEE
Confidence 456788899999999999888765321001124789999999753322111100 01234567889999999
Q ss_pred EcCCCCCCCCCCcccc-----------hhhHHHHHH-HHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC--
Q 002164 717 GGPTTPIIGEGDEEAN-----------DRFVEQLVA-CAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-- 782 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~-----------~~~~~~~~~-D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-- 782 (958)
+ .+.+|+|.+... ......... |+.++++++.++. +.++++++||||||.+++.++.++|+
T Consensus 96 ~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~ 170 (377)
T 1k8q_A 96 L---GNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLA 170 (377)
T ss_dssp E---CCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHH
T ss_pred E---ecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhh
Confidence 9 555677776541 123456666 9999999988762 34689999999999999999999988
Q ss_pred -ceeEEEEeccCCCCCCCCCCcc-------------------cccchhh-------------------------------
Q 002164 783 -LFCCGIARSGAYNRTLTPFGFQ-------------------NEDRTLW------------------------------- 811 (958)
Q Consensus 783 -~~~a~v~~~~~~~~~~~~~~~~-------------------~~~~~~~------------------------------- 811 (958)
+++++|+++|..........+. ......+
T Consensus 171 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (377)
T 1k8q_A 171 KRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMN 250 (377)
T ss_dssp TTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGG
T ss_pred hhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCccc
Confidence 8999999998754321100000 0000000
Q ss_pred ---h----------------------------------------cHHHHHhc-CcccccCCCCCCEEEEeeCCCCCCCCC
Q 002164 812 ---E----------------------------------------ATSTYVEM-SPFMSANKLKKPILLVHGEEDNNSGTL 847 (958)
Q Consensus 812 ---~----------------------------------------~~~~~~~~-sp~~~~~~~~~P~Lii~G~~D~~v~~~ 847 (958)
. +...+... .+...+.++++|+|++||++|..+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-- 328 (377)
T 1k8q_A 251 LNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD-- 328 (377)
T ss_dssp SCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC--
T ss_pred CCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccC--
Confidence 0 00000000 0122367889999999999999998
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC--cccHHHHHHHHHHHHHHh
Q 002164 848 TMQSDRFFNALKGHGALCRLVILPFESHGYAA--RESIMHVLWETDRWLQKY 897 (958)
Q Consensus 848 ~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~~~i~~fl~~~ 897 (958)
++.+.++++.+... .+++++|++||.... .+....+.+.|.+||.++
T Consensus 329 ~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 329 PHDVDLLLSKLPNL---IYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp HHHHHHHHTTCTTE---EEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcCc---ccEEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 88888887766442 258999999998642 356678889999999763
No 94
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.77 E-value=5.2e-18 Score=191.25 Aligned_cols=233 Identities=17% Similarity=0.183 Sum_probs=161.1
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
...+.++++. +|..+.++++.| + ..+.|+||++||+..... .+.......++++||.|+
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~-~-----~~~~p~vv~~HG~~~~~~--------------~~~~~~~~~~~~~g~~vi 191 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIIS-E-----DKAQDTLIVVGGGDTSRE--------------DLFYMLGYSGWEHDYNVL 191 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECC-S-----SSCCCEEEEECCSSCCHH--------------HHHHHTHHHHHHTTCEEE
T ss_pred CCcEEEEEeE-CCeEEEEEEEcC-C-----CCCCCEEEEECCCCCCHH--------------HHHHHHHHHHHhCCcEEE
Confidence 3457778887 688999998843 2 223699999999531100 001111225668999999
Q ss_pred EcCCCCCCCCCCcccch-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCC
Q 002164 717 GGPTTPIIGEGDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~~-~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (958)
+ .+.+|+|.+.... .+......|+.++++++..++ ++|+|+|||+||++++.++.++| +++++|+.+|+.+
T Consensus 192 ~---~D~~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~ 263 (405)
T 3fnb_A 192 M---VDLPGQGKNPNQGLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYD 263 (405)
T ss_dssp E---ECCTTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSC
T ss_pred E---EcCCCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCC
Confidence 9 5556777774321 222345788899999987764 68999999999999999999997 8999999999876
Q ss_pred CCCC-----------CCCccc-------cc--chhh---------------hcHHHHHhcCcccccCCCCCCEEEEeeCC
Q 002164 796 RTLT-----------PFGFQN-------ED--RTLW---------------EATSTYVEMSPFMSANKLKKPILLVHGEE 840 (958)
Q Consensus 796 ~~~~-----------~~~~~~-------~~--~~~~---------------~~~~~~~~~sp~~~~~~~~~P~Lii~G~~ 840 (958)
.... +..... .. ...| .....+....+...+.++++|+||+||++
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~ 343 (405)
T 3fnb_A 264 VAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAG 343 (405)
T ss_dssp HHHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETT
T ss_pred HHHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCC
Confidence 2110 000000 00 0000 00122223344444778899999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCcc--CCCcccHHHHHHHHHHHHHHhhcc
Q 002164 841 DNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHG--YAARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 841 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~--~~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
|..+| +.++.++++.++..+.++++++++++.|. ....++...+.+.+.+||+++++.
T Consensus 344 D~~v~--~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 344 EDSEL--MRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp SCHHH--HHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred CcCCC--hHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 99988 99999999999999899999999665543 124667788899999999999864
No 95
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.77 E-value=7.9e-18 Score=178.02 Aligned_cols=203 Identities=16% Similarity=0.075 Sum_probs=141.3
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC--CcEEEEcCC---CCC
Q 002164 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR--GFAILGGPT---TPI 723 (958)
Q Consensus 649 g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~--G~~vl~~~~---~~~ 723 (958)
+.+...+..+|+. + ..+.|+||++||..... ..+. ..+..|+.+ ++.++.++. ...
T Consensus 49 ~~~~l~y~~~p~~--~--~~~~plVI~LHG~G~~~-----------~~~~----~~~~~l~~~~~~~~~v~P~Ap~~~~~ 109 (285)
T 4fhz_A 49 MTRKLTFGRRGAA--P--GEATSLVVFLHGYGADG-----------ADLL----GLAEPLAPHLPGTAFVAPDAPEPCRA 109 (285)
T ss_dssp CCCCCCEEEEESC--T--TCCSEEEEEECCTTBCH-----------HHHH----TTHHHHGGGSTTEEEEEECCSEECTT
T ss_pred ccccceeecCCCC--C--CCCCcEEEEEcCCCCCH-----------HHHH----HHHHHHHHhCCCeEEEecCCCccccc
Confidence 3333334555654 2 23589999999942110 1111 123455553 788877542 122
Q ss_pred CCCCCcccc------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEec
Q 002164 724 IGEGDEEAN------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (958)
Q Consensus 724 ~G~G~~~~~------------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (958)
.|.|..+.. .........++.+.++.+.++..+|++||+|+|+|+||++|+.++.++|++|+++|+++
T Consensus 110 ~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~s 189 (285)
T 4fhz_A 110 NGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFS 189 (285)
T ss_dssp SSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEES
T ss_pred CCCcccccccccccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEee
Confidence 344443321 01122335677777888877777999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeC
Q 002164 792 GAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILP 871 (958)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p 871 (958)
|... .+..+.. ..+.++|+|++||++|.+|| ++.+++++++|+..|.++++.+||
T Consensus 190 G~l~-----------------~~~~~~~------~~~~~~Pvl~~hG~~D~~Vp--~~~~~~~~~~L~~~g~~~~~~~y~ 244 (285)
T 4fhz_A 190 GRLL-----------------APERLAE------EARSKPPVLLVHGDADPVVP--FADMSLAGEALAEAGFTTYGHVMK 244 (285)
T ss_dssp CCCS-----------------CHHHHHH------HCCCCCCEEEEEETTCSSSC--THHHHHHHHHHHHTTCCEEEEEET
T ss_pred cCcc-----------------Cchhhhh------hhhhcCcccceeeCCCCCcC--HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 7421 0111111 12346899999999999999 999999999999999999999999
Q ss_pred CCCccCCCcccHHHHHHHHHHHHHHhhcc
Q 002164 872 FESHGYAARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 872 ~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
++||.+. .+.+..+.+||+++|..
T Consensus 245 g~gH~i~-----~~~l~~~~~fL~~~Lpd 268 (285)
T 4fhz_A 245 GTGHGIA-----PDGLSVALAFLKERLPD 268 (285)
T ss_dssp TCCSSCC-----HHHHHHHHHHHHHHCC-
T ss_pred CCCCCCC-----HHHHHHHHHHHHHHCcC
Confidence 9999985 33467899999999854
No 96
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.77 E-value=1.8e-17 Score=175.34 Aligned_cols=227 Identities=13% Similarity=0.092 Sum_probs=154.2
Q ss_pred cEEEEEE-EeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 638 QKELIKY-QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 638 ~~~~~~~-~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
+.+.+++ .+.||.++....+.+.+ .+.|+||++||+.... ..+ ........++++||.|+
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~------~~~~~vv~~HG~~~~~-----------~~~--~~~~~~~~l~~~g~~v~ 70 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ------DERPTCIWLGGYRSDM-----------TGT--KALEMDDLAASLGVGAI 70 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS------TTSCEEEEECCTTCCT-----------TSH--HHHHHHHHHHHHTCEEE
T ss_pred CcceEEEeeccCcceEEEEeccCCC------CCCCeEEEECCCcccc-----------ccc--hHHHHHHHHHhCCCcEE
Confidence 3455555 56799999888776642 1268999999964210 010 11124556778999999
Q ss_pred EcCCCCCCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CC---CceeEEE
Q 002164 717 GGPTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH---AP---HLFCCGI 788 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~---~p---~~~~a~v 788 (958)
+ .+.+|+|.+... ........+|+.++++++. .++++++|||+||.+++.++.+ +| ++++++|
T Consensus 71 ~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~i 141 (270)
T 3llc_A 71 R---FDYSGHGASGGAFRDGTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMV 141 (270)
T ss_dssp E---ECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEE
T ss_pred E---eccccCCCCCCccccccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeE
Confidence 9 555677766443 2345667888888888763 4699999999999999999999 99 8999999
Q ss_pred EeccCCCCCCCC-CC-ccc--------------------c-cchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCC
Q 002164 789 ARSGAYNRTLTP-FG-FQN--------------------E-DRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSG 845 (958)
Q Consensus 789 ~~~~~~~~~~~~-~~-~~~--------------------~-~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~ 845 (958)
+++|..+..... +. +.. . ..........+........+.++++|+|++||++|..+|
T Consensus 142 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~ 221 (270)
T 3llc_A 142 LIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVP 221 (270)
T ss_dssp EESCCTTHHHHTTGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSC
T ss_pred EecCcccchhhhhhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCC
Confidence 999875421100 00 000 0 000000112233334456677889999999999999998
Q ss_pred CChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 846 TLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 846 ~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
+..+.++++.++. .+++++++++++|.+...+....+.+.+.+||++
T Consensus 222 --~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 222 --YQHALKLVEHLPA--DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp --HHHHHHHHHTSCS--SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHhcCC--CCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 8888888877654 3589999999999876666666777777777654
No 97
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.77 E-value=3.7e-17 Score=166.07 Aligned_cols=180 Identities=14% Similarity=0.075 Sum_probs=132.7
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCC----------CCCCCCccc---chhh
Q 002164 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP----------IIGEGDEEA---NDRF 735 (958)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~----------~~G~G~~~~---~~~~ 735 (958)
+.| ||++||.... ...| ......|+ .||.|+.++... ..|+|.... ....
T Consensus 16 ~~p-vv~lHG~g~~-----------~~~~----~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~ 78 (209)
T 3og9_A 16 LAP-LLLLHSTGGD-----------EHQL----VEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLES 78 (209)
T ss_dssp SCC-EEEECCTTCC-----------TTTT----HHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHH
T ss_pred CCC-EEEEeCCCCC-----------HHHH----HHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHH
Confidence 378 9999995321 1112 13344454 789999866321 223333211 1223
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHH
Q 002164 736 VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATS 815 (958)
Q Consensus 736 ~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (958)
......++.+.++.+.++..+|+++++|+|||+||.+++.++.++|++++++|+.+|......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------------- 141 (209)
T 3og9_A 79 LDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF----------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-----------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-----------------
Confidence 455677777888888777668899999999999999999999999999999999998644211
Q ss_pred HHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 816 TYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 816 ~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
.......++|+|++||++|..+| +++++++++.|+..+.++++.+++ ++|.+. .+....+.+||+
T Consensus 142 -------~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~ 206 (209)
T 3og9_A 142 -------EQTVQLDDKHVFLSYAPNDMIVP--QKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLT 206 (209)
T ss_dssp -------CCCCCCTTCEEEEEECTTCSSSC--HHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHH
T ss_pred -------cccccccCCCEEEEcCCCCCccC--HHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHH
Confidence 01123457899999999999999 999999999999999999999998 699984 344677889988
Q ss_pred Hh
Q 002164 896 KY 897 (958)
Q Consensus 896 ~~ 897 (958)
++
T Consensus 207 ~~ 208 (209)
T 3og9_A 207 ET 208 (209)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 98
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.77 E-value=1.8e-17 Score=171.21 Aligned_cols=198 Identities=12% Similarity=0.086 Sum_probs=143.8
Q ss_pred EEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCC--------------
Q 002164 656 LYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT-------------- 721 (958)
Q Consensus 656 l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~-------------- 721 (958)
++.|+. +.+.|+||++||...... .| ......|+++||.|++++..
T Consensus 14 ~~~p~~-----~~~~~~vv~lHG~~~~~~-----------~~----~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 73 (232)
T 1fj2_A 14 AIVPAA-----RKATAAVIFLHGLGDTGH-----------GW----AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 73 (232)
T ss_dssp EEECCS-----SCCSEEEEEECCSSSCHH-----------HH----HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEEC
T ss_pred cccCCC-----CCCCceEEEEecCCCccc-----------hH----HHHHHHHhcCCcEEEecCCCcccccccccccccc
Confidence 566654 234899999999642110 01 12334455679999996432
Q ss_pred --CCCCCCCcc-cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC
Q 002164 722 --PIIGEGDEE-ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (958)
Q Consensus 722 --~~~G~G~~~-~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~ 798 (958)
+.+|+.... ..........+|+.++++++.+ ..+|+++++++|||+||.+++.++.++|++++++|+++|......
T Consensus 74 w~d~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~ 152 (232)
T 1fj2_A 74 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA 152 (232)
T ss_dssp SSCBCCCSTTCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG
T ss_pred ccccccCCcccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc
Confidence 334442111 1223356678888899998887 557888999999999999999999999999999999998654211
Q ss_pred CCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCc--EEEEEeCCCCcc
Q 002164 799 TPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGAL--CRLVILPFESHG 876 (958)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~--~~~~~~p~~~H~ 876 (958)
. + ......+.++++|+|++||++|..++ ++.+.++++.++..+.+ ++++++++++|.
T Consensus 153 ~-----------~--------~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~ 211 (232)
T 1fj2_A 153 S-----------F--------PQGPIGGANRDISILQCHGDCDPLVP--LMFGSLTVEKLKTLVNPANVTFKTYEGMMHS 211 (232)
T ss_dssp G-----------S--------CSSCCCSTTTTCCEEEEEETTCSSSC--HHHHHHHHHHHHHHSCGGGEEEEEETTCCSS
T ss_pred c-----------c--------cccccccccCCCCEEEEecCCCccCC--HHHHHHHHHHHHHhCCCCceEEEEeCCCCcc
Confidence 0 0 00112356678999999999999998 89999999999988855 999999999999
Q ss_pred CCCcccHHHHHHHHHHHHHHhhcc
Q 002164 877 YAARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 877 ~~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
+. .+..+.+.+||.+++..
T Consensus 212 ~~-----~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 212 SC-----QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp CC-----HHHHHHHHHHHHHHSCC
T ss_pred cC-----HHHHHHHHHHHHHhcCC
Confidence 83 33458899999999854
No 99
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.76 E-value=8.5e-18 Score=197.05 Aligned_cols=237 Identities=20% Similarity=0.174 Sum_probs=163.8
Q ss_pred EEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHH-HHHHHCCcEEEE
Q 002164 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWLARGFAILG 717 (958)
Q Consensus 639 ~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~G~~vl~ 717 (958)
.+.++|++.||.+|.+.+|+|++ .+++|+||+.||........ ..|. ..+ +.|+++||+|+.
T Consensus 9 ~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vv~~~~~g~~~~~~--------~~y~----~~~~~~la~~Gy~vv~ 71 (587)
T 3i2k_A 9 ASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFDVFA--------WSTQ----STNWLEFVRDGYAVVI 71 (587)
T ss_dssp EEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTCHHH--------HHTT----TCCTHHHHHTTCEEEE
T ss_pred EEEEEEECCCCCEEEEEEEECCC-----CCCeeEEEEECCcCCCcccc--------ccch----hhHHHHHHHCCCEEEE
Confidence 46789999999999999999975 23589999998742111000 0010 013 688999999999
Q ss_pred cCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC-CCC
Q 002164 718 GPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA-YNR 796 (958)
Q Consensus 718 ~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~-~~~ 796 (958)
+ +.+|+|.+.+....+....+|+.++++||.++++.+ .+|+++|+||||++++.++++.|+.++|+|+.++. .+.
T Consensus 72 ~---D~RG~G~S~g~~~~~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 72 Q---DTRGLFASEGEFVPHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp E---ECTTSTTCCSCCCTTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred E---cCCCCCCCCCccccccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 4 445666665432223568999999999999988776 79999999999999999999988999999999988 664
Q ss_pred CCCC---CCcccc-cchhhhc-----------------------------------------------------------
Q 002164 797 TLTP---FGFQNE-DRTLWEA----------------------------------------------------------- 813 (958)
Q Consensus 797 ~~~~---~~~~~~-~~~~~~~----------------------------------------------------------- 813 (958)
.... -+.... ....|..
T Consensus 148 ~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (587)
T 3i2k_A 148 RAPWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVD 227 (587)
T ss_dssp CCCCSCTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTT
T ss_pred ccceeecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhc
Confidence 3211 000000 0000100
Q ss_pred ----HHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCC---------Cc
Q 002164 814 ----TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA---------AR 880 (958)
Q Consensus 814 ----~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~---------~~ 880 (958)
...|...++...+++|++|+|+++|..|..+ ..+.++|++|+..+. .++++-|. .|... ..
T Consensus 228 ~~~~d~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~----~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~ 301 (587)
T 3i2k_A 228 HPDNDESWQSISLFERLGGLATPALITAGWYDGFV----GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGI 301 (587)
T ss_dssp CCSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTH----HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCG
T ss_pred CCCCChHHhcCChhhhhccCCCCEEEEccCCCccc----hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCC
Confidence 1123344556678899999999999999764 457889999987764 46776665 46531 11
Q ss_pred cc---HHHHHHHHHHHHHHhhccCC
Q 002164 881 ES---IMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 881 ~~---~~~~~~~i~~fl~~~l~~~~ 902 (958)
.. ..+..+.+++||++||++..
T Consensus 302 ~~~~~~~~~~~~~~~wFD~~Lkg~~ 326 (587)
T 3i2k_A 302 AATYPIQEATTMHKAFFDRHLRGET 326 (587)
T ss_dssp GGSCCHHHHHHHHHHHHHHHHSCCT
T ss_pred ccccccchhhHHHHHHHHHHhcCCC
Confidence 11 12344889999999998654
No 100
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.76 E-value=5e-18 Score=190.93 Aligned_cols=229 Identities=12% Similarity=0.063 Sum_probs=153.6
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
...+.++++. +|..+.++++.|.+ .++.|+||++||..... ..........|+++||.|+
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~-----~~~~P~vv~~hG~~~~~--------------~~~~~~~~~~l~~~G~~V~ 225 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSLQ--------------TDMWRLFRDHLAKHDIAML 225 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCS-----SSCEEEEEEECCTTSCG--------------GGGHHHHHHTTGGGTCEEE
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCC-----CCCCCEEEEECCCCccH--------------HHHHHHHHHHHHhCCCEEE
Confidence 3577888887 88899999999975 23589999999953110 0111223456778999999
Q ss_pred EcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC
Q 002164 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (958)
. .+.+|+|.+...... .........+++++.+.+.+|+++|+|+|||+||++++.++...|++++++|+.+|+.+.
T Consensus 226 ~---~D~~G~G~s~~~~~~-~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~ 301 (415)
T 3mve_A 226 T---VDMPSVGYSSKYPLT-EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHD 301 (415)
T ss_dssp E---ECCTTSGGGTTSCCC-SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSH
T ss_pred E---ECCCCCCCCCCCCCC-CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccc
Confidence 9 455567666432110 111222357788888888888999999999999999999999998899999999987541
Q ss_pred CCCCCCcccc-------------cchhhhcH---HHHHhcCcccc----cCCCCCCEEEEeeCCCCCCCCChHHHHHHHH
Q 002164 797 TLTPFGFQNE-------------DRTLWEAT---STYVEMSPFMS----ANKLKKPILLVHGEEDNNSGTLTMQSDRFFN 856 (958)
Q Consensus 797 ~~~~~~~~~~-------------~~~~~~~~---~~~~~~sp~~~----~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~ 856 (958)
......+... ........ ..+..+++... +.++++|+|++||++|..+| +..+.++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp--~~~~~~l~~ 379 (415)
T 3mve_A 302 IFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSP--YSDNQMVAF 379 (415)
T ss_dssp HHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSC--HHHHHHHHH
T ss_pred ccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCC--HHHHHHHHH
Confidence 1100000000 00000000 11222333222 45788999999999999998 888777665
Q ss_pred HHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 857 ALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 857 ~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
.+.+++++++|+..+. .....+...+.+||.++|.
T Consensus 380 ----~~~~~~l~~i~g~~~h----~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 380 ----FSTYGKAKKISSKTIT----QGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp ----TBTTCEEEEECCCSHH----HHHHHHHHHHHHHHHHHHT
T ss_pred ----hCCCceEEEecCCCcc----cchHHHHHHHHHHHHHHhc
Confidence 4567899999982221 2456778899999999874
No 101
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.76 E-value=9.8e-17 Score=195.88 Aligned_cols=330 Identities=11% Similarity=0.024 Sum_probs=198.0
Q ss_pred hHHHhhcCCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccC-CCCCCce
Q 002164 101 EIREIVDAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFP-DGKLGQE 179 (958)
Q Consensus 101 ~~~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-dg~~~~~ 179 (958)
++..++.....+. .+|||++++|...+ .+... ..||+.+... ++ +..
T Consensus 101 ~~~~~~~~~~~~~--p~pdG~~~~~~~~~----------------------~~~~~------~~l~~~~~~~~~~--~~~ 148 (741)
T 1yr2_A 101 RMKALIDYERFGL--PQRRGASVFYSWNS----------------------GLMNQ------SQLLVRPADAPVG--TKG 148 (741)
T ss_dssp HHHHHSCCCEECC--CEEETTEEEEEEEC----------------------SSCSS------CEEEEEETTSCTT--CCC
T ss_pred HHHHhhcccccCC--CEEECCEEEEEEEc----------------------CCCeE------EEEEEEcCCccCC--CCC
Confidence 3455555444444 45999999999875 11111 3678877531 02 344
Q ss_pred eeecc---CCCCC--cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecC
Q 002164 180 IEIQG---FPDGA--KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN 254 (958)
Q Consensus 180 ~~lt~---~~~~~--~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspD 254 (958)
+.|.. ++.+. .+..++|||||++|||..+.. +.+..+||++|+++|+..+.+.... . +..++||||
T Consensus 149 ~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~----G~e~~~i~v~dl~tg~~~~~~~~~~-~----~~~~~wspD 219 (741)
T 1yr2_A 149 RVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG----GSDWRTVKFVGVADGKPLADELKWV-K----FSGLAWLGN 219 (741)
T ss_dssp EEEECGGGCC----EEEEEEEECTTSSEEEEEEEET----TCSEEEEEEEETTTCCEEEEEEEEE-E----SCCCEESTT
T ss_pred EEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC----CCceEEEEEEECCCCCCCCccCCCc-e----eccEEEECC
Confidence 44421 12222 577899999999999988633 4445789999999998866522111 1 358999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--eeecCCC
Q 002164 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP 331 (958)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--~~~l~~~ 331 (958)
+.|+|+........ ... ... ....+||++++ ++. .+.+...
T Consensus 220 -~~l~~~~~~~~~~~---------~~~------------------~~~--------~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 220 -DALLYSRFAEPKEG---------QAF------------------QAL--------NYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp -SEEEEEECCCC-----------------------------------C--------CCCCEEEEEETTSCGGGCEEEECC
T ss_pred -CEEEEEEecCcccc---------ccc------------------ccC--------CCCCEEEEEECCCCchhCEEEecc
Confidence 99999843221100 000 000 02356999998 664 2344332
Q ss_pred ----ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCc--e-EEEeccCCccccCcccccccccCccee
Q 002164 332 ----AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--F-VRELCDLPLAEDIPIAFNSVRKGMRSI 404 (958)
Q Consensus 332 ----~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~--~-~~~l~~~~~~~~~p~~~~~~~~~~~~~ 404 (958)
..+..+.|||||++|++.+.+.. ....+|+++|++++ + .+.|+.... ....+
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~--------~~~~~l~~~d~~~~~~~~~~~l~~~~~-------------~~~~~ 322 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGT--------DPVNTVHVARVTNGKIGPVTALIPDLK-------------AQWDF 322 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTT--------CSCCEEEEEEEETTEECCCEEEECSSS-------------SCEEE
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccC--------CCcceEEEEECCCCCCcccEEecCCCC-------------ceEEE
Confidence 23678899999999999985431 12458999999876 4 566654221 11223
Q ss_pred eeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCC--CCceEEEeec-cccCceeeecCCceEEEEEeccccce
Q 002164 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQG--EGPEILHKLD-LRYGGISWCDDSLALVYESWYKTRRT 481 (958)
Q Consensus 405 ~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g--~~~~~l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~ 481 (958)
++|||+.|++.++.. .....|+++++ ++ +..+.+.... ..+..+.|+ +..|++....++. .
T Consensus 323 -~~~dg~~l~~~s~~~---------~~~~~l~~~d~---~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~-~ 386 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDG---------APLKKIVRVDL---SGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAK-S 386 (741)
T ss_dssp -EEEETTEEEEEECTT---------CTTCEEEEEEC---SSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTE-E
T ss_pred -EeccCCEEEEEECCC---------CCCCEEEEEeC---CCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCE-E
Confidence 569999999974431 23567999996 44 3445554332 233445665 5567776655543 7
Q ss_pred EEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCC
Q 002164 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (958)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~ 561 (958)
+||+++++++ ....+.......+.. ++++|||+.|+|..... .....||+||+++
T Consensus 387 ~l~~~~~~g~--~~~~l~~~~~~~v~~------~~~s~d~~~l~~~~ss~-----------------~~P~~i~~~d~~t 441 (741)
T 1yr2_A 387 QVLAFDLDGK--PAGAVSLPGIGSASG------LSGRPGDRHAYLSFSSF-----------------TQPATVLALDPAT 441 (741)
T ss_dssp EEEEEETTSC--EEEECBCSSSCEEEE------EECCBTCSCEEEEEEET-----------------TEEEEEEEEETTT
T ss_pred EEEEEeCCCC--ceeeccCCCCeEEEE------eecCCCCCEEEEEEcCC-----------------CCCCEEEEEECCC
Confidence 8999998653 222222111122222 67899999888876421 1234699999999
Q ss_pred CceEEEec
Q 002164 562 GSKERIWE 569 (958)
Q Consensus 562 g~~~~l~~ 569 (958)
|+.+.+..
T Consensus 442 g~~~~l~~ 449 (741)
T 1yr2_A 442 AKTTPWEP 449 (741)
T ss_dssp TEEEECSC
T ss_pred CcEEEEec
Confidence 88766654
No 102
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.76 E-value=5.9e-18 Score=183.54 Aligned_cols=226 Identities=17% Similarity=0.112 Sum_probs=154.9
Q ss_pred cEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-HCCcEEE
Q 002164 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAIL 716 (958)
Q Consensus 638 ~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~vl 716 (958)
..+.++++..+| .+.+++| |. .++.|+||++|||.+..+ +...+ ..++..|+ +.||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~------~~~~p~vv~~HGgg~~~g--------~~~~~----~~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ------KPDSPVLVYYHGGGFVIC--------SIESH----DALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES------SSSEEEEEEECCSTTTSC--------CTGGG----HHHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC------CCCceEEEEECCcccccC--------ChhHh----HHHHHHHHHHhCCEEE
Confidence 477888988777 8999998 42 124899999999864322 11111 23456777 5899999
Q ss_pred EcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEE
Q 002164 717 GGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIA 789 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~ 789 (958)
.+++ +|+|.+.. +....|+.++++|+.++. .+|+++|+|+|+|+||++|+.++.+.|++ ++++|+
T Consensus 115 ~~dy---rg~g~~~~-----p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 186 (311)
T 1jji_A 115 SVDY---RLAPEHKF-----PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL 186 (311)
T ss_dssp EEEC---CCTTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred EecC---CCCCCCCC-----CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 9555 46665432 345778899999998852 46788999999999999999999887655 999999
Q ss_pred eccCCCCCCCCCCc---------cccc--chhhhc----H--HHHHhcCccc-ccCCCCCCEEEEeeCCCCCCCCChHHH
Q 002164 790 RSGAYNRTLTPFGF---------QNED--RTLWEA----T--STYVEMSPFM-SANKLKKPILLVHGEEDNNSGTLTMQS 851 (958)
Q Consensus 790 ~~~~~~~~~~~~~~---------~~~~--~~~~~~----~--~~~~~~sp~~-~~~~~~~P~Lii~G~~D~~v~~~~~~~ 851 (958)
++|..+.......+ .... ...|.. . ......+|+. .+..+ .|+||+||++|..+ .++
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~----~~~ 261 (311)
T 1jji_A 187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLR----DEG 261 (311)
T ss_dssp ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH----HHH
T ss_pred eCCccCCCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcch----HHH
Confidence 99987743211000 0000 000100 0 0001123433 22222 59999999999874 567
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHH
Q 002164 852 DRFFNALKGHGALCRLVILPFESHGYAA----RESIMHVLWETDRWLQK 896 (958)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~~~i~~fl~~ 896 (958)
.+++++|+..|+++++++|||++|.+.. .+....+.+.+.+||.+
T Consensus 262 ~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 262 EVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 8899999999999999999999998743 23456777888888864
No 103
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.76 E-value=2.4e-17 Score=172.10 Aligned_cols=204 Identities=14% Similarity=0.056 Sum_probs=145.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---h-hHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---R-FVEQLVACAEA 745 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~---~-~~~~~~~D~~~ 745 (958)
.|+||++||..... .. ....+..|+++||.|++ .+.+|+|.+.... . ......+|+.+
T Consensus 22 ~~~vv~~HG~~~~~-----------~~----~~~~~~~l~~~G~~v~~---~d~~g~g~s~~~~~~~~~~~~~~~~d~~~ 83 (251)
T 3dkr_A 22 DTGVVLLHAYTGSP-----------ND----MNFMARALQRSGYGVYV---PLFSGHGTVEPLDILTKGNPDIWWAESSA 83 (251)
T ss_dssp SEEEEEECCTTCCG-----------GG----GHHHHHHHHHTTCEEEE---CCCTTCSSSCTHHHHHHCCHHHHHHHHHH
T ss_pred CceEEEeCCCCCCH-----------HH----HHHHHHHHHHCCCEEEe---cCCCCCCCCChhhhcCcccHHHHHHHHHH
Confidence 68899999964211 11 13456778899999999 5556777763321 2 34566889999
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccc-------------cc----
Q 002164 746 AVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-------------DR---- 808 (958)
Q Consensus 746 av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~-------------~~---- 808 (958)
+++++.++ .++++++|||+||.+++.++.++|++++++++.+|.............. ..
T Consensus 84 ~i~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 3dkr_A 84 AVAHMTAK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQIL 159 (251)
T ss_dssp HHHHHHTT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHH
Confidence 99999877 4699999999999999999999999999999998876532110000000 00
Q ss_pred -hhhhcHHHHHhc--CcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHH
Q 002164 809 -TLWEATSTYVEM--SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMH 885 (958)
Q Consensus 809 -~~~~~~~~~~~~--sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~ 885 (958)
........+... .....+.++++|+|+++|++|..+| +..+.++++.+... .+++++++++++|.+....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~ 236 (251)
T 3dkr_A 160 AYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVD--GRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHA 236 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBC--TTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHH
T ss_pred hhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccC--hHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhH
Confidence 000000000000 1234567788999999999999998 89999999888764 56899999999999865555788
Q ss_pred HHHHHHHHHHHhh
Q 002164 886 VLWETDRWLQKYC 898 (958)
Q Consensus 886 ~~~~i~~fl~~~l 898 (958)
+.+.+.+||+++.
T Consensus 237 ~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 237 LEEDVIAFMQQEN 249 (251)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhc
Confidence 8999999998753
No 104
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.75 E-value=4.1e-16 Score=186.06 Aligned_cols=369 Identities=11% Similarity=0.082 Sum_probs=204.4
Q ss_pred CCCCceecCCCCEEEEEecCC-----------CCCchhcccccceeeceeecCCCCC-ccceeeEeceeEEEccCCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRA-----------LPPLEELARPEEKLAGLRIDGKCNT-RSRMSFYTGIGIHQLFPDGKLG 177 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~dg~~~ 177 (958)
.+..++|||||++||....+. ...+..+.++...+..+.+.+++.. ....+.++.|.+|+... + .
T Consensus 105 ~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-~--~ 181 (611)
T 1nr0_A 105 PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-F--K 181 (611)
T ss_dssp CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-B--E
T ss_pred ceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-C--e
Confidence 567899999999999876431 1223345566677778888887653 45555567899999743 1 1
Q ss_pred ceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCC---ccccccccceEEecC
Q 002164 178 QEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD---IYLNAIFDNFVWVNN 254 (958)
Q Consensus 178 ~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~---~~~~~~~~~~~wspD 254 (958)
....+.++ ...+...+|||||+.|+... ....|.+|++.+|+......... ......+..++|+||
T Consensus 182 ~~~~l~~H--~~~V~~v~fspdg~~las~s---------~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd 250 (611)
T 1nr0_A 182 FKSTFGEH--TKFVHSVRYNPDGSLFASTG---------GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250 (611)
T ss_dssp EEEEECCC--SSCEEEEEECTTSSEEEEEE---------TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred Eeeeeccc--cCceEEEEECCCCCEEEEEE---------CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC
Confidence 23344432 34789999999999988865 25678899988877654331100 001122778999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccch----hhhh-cc-CchhhhHHHHhhcceEEEEEc-CCeee-
Q 002164 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRT----FQDL-LK-DEYDEDLFDYYATTQLVLVSL-DGTVK- 326 (958)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~----~~d~-~~-~~~~~~~~~~~~~~~l~~~~~-~g~~~- 326 (958)
|+.|+....+... ++++........... ..+. .. ...+..+........+.+++. +++..
T Consensus 251 g~~l~s~s~D~~v------------~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~ 318 (611)
T 1nr0_A 251 GTKIASASADKTI------------KIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQ 318 (611)
T ss_dssp SSEEEEEETTSEE------------EEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCeE------------EEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcce
Confidence 9999877443221 122221111000000 0000 00 000000000012344556666 55433
Q ss_pred ecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEecc--CCcc--------c-------
Q 002164 327 EIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD--LPLA--------E------- 388 (958)
Q Consensus 327 ~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~--~~~~--------~------- 388 (958)
.+... ..+..++|||||++|+..+.+ +.|.+||+.++....+.. +... +
T Consensus 319 ~~~gh~~~v~~l~~spdg~~l~s~s~D-------------~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s 385 (611)
T 1nr0_A 319 VRYGHNKAITALSSSADGKTLFSADAE-------------GHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS 385 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEE
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCC-------------CcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEE
Confidence 33333 678899999999999887743 367777776543322110 0000 0
Q ss_pred --------------------------cCcc--cc--c-----------------------ccccCcceeeeecCCCCceE
Q 002164 389 --------------------------DIPI--AF--N-----------------------SVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 389 --------------------------~~p~--~~--~-----------------------~~~~~~~~~~~spDG~~l~~ 415 (958)
..+. .+ + .....+..++|||||+.|+.
T Consensus 386 ~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~las 465 (611)
T 1nr0_A 386 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAV 465 (611)
T ss_dssp TTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEE
T ss_pred cCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEE
Confidence 0000 00 0 00012234667777766555
Q ss_pred EEEeccCCCcccccccCCeEEEEeCCCCCCCCceEE--EeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCC
Q 002164 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL--HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l--~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~ 493 (958)
- +..+.|++|++ .++....+ ..+...+..++|||||+.|+..+.... .++|.+..... .
T Consensus 466 g-------------s~D~~v~lwd~---~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~--v~~w~~~~~~~-~ 526 (611)
T 1nr0_A 466 G-------------GQDSKVHVYKL---SGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRK--VIPYSVANNFE-L 526 (611)
T ss_dssp E-------------ETTSEEEEEEE---ETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSC--EEEEEGGGTTE-E
T ss_pred e-------------CCCCeEEEEEc---cCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCC--EEEEEcCCCCc-e
Confidence 2 44567888885 44433222 344566788999999999987765443 55665432110 0
Q ss_pred CcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc
Q 002164 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (958)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~ 563 (958)
........+...+.. ++|||||++|+....+ ..|.+||+++++
T Consensus 527 ~~~~~~~~H~~~V~~------v~fspdg~~lasgs~D---------------------~~v~lW~~~~~~ 569 (611)
T 1nr0_A 527 AHTNSWTFHTAKVAC------VSWSPDNVRLATGSLD---------------------NSVIVWNMNKPS 569 (611)
T ss_dssp SCCCCCCCCSSCEEE------EEECTTSSEEEEEETT---------------------SCEEEEETTCTT
T ss_pred eeeeeeeecccceeE------EEECCCCCEEEEEECC---------------------CcEEEEECCCcc
Confidence 000011112333333 8899999999887632 249999998765
No 105
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.74 E-value=1.4e-16 Score=164.03 Aligned_cols=185 Identities=14% Similarity=0.140 Sum_probs=138.2
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH--CCcEEEEcCCC----------------CCCCCCCc
Q 002164 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA--RGFAILGGPTT----------------PIIGEGDE 729 (958)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~G~~vl~~~~~----------------~~~G~G~~ 729 (958)
.+.|+||++||+.... .. .......|++ +||.|++++.. +.+|+|.+
T Consensus 22 ~~~~~vv~lHG~~~~~-----------~~----~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~ 86 (226)
T 3cn9_A 22 NADACIIWLHGLGADR-----------TD----FKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA 86 (226)
T ss_dssp TCCEEEEEECCTTCCG-----------GG----GHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST
T ss_pred CCCCEEEEEecCCCCh-----------HH----HHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc
Confidence 3589999999964211 11 1244567777 99999996653 44466543
Q ss_pred ccc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH-hCCCceeEEEEeccCCCCCCCCCCccccc
Q 002164 730 EAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA-HAPHLFCCGIARSGAYNRTLTPFGFQNED 807 (958)
Q Consensus 730 ~~~-~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~~~~~~~~~~~~~~~~~ 807 (958)
... ........+++..+++++.+. .+++++++|+|||+||.+++.++. +.|++++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~-------- 157 (226)
T 3cn9_A 87 RAIDEDQLNASADQVIALIDEQRAK-GIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD-------- 157 (226)
T ss_dssp TCBCHHHHHHHHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG--------
T ss_pred ccccchhHHHHHHHHHHHHHHHHHc-CCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh--------
Confidence 222 233456677777888877763 467789999999999999999999 999999999999986432100
Q ss_pred chhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHH
Q 002164 808 RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVL 887 (958)
Q Consensus 808 ~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~ 887 (958)
+ .. ...++++|+|+++|++|..+| ++.+.++++.++..|.++++++++ ++|.+. .+..
T Consensus 158 ---------~-~~----~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~ 215 (226)
T 3cn9_A 158 ---------L-AL----DERHKRIPVLHLHGSQDDVVD--PALGRAAHDALQAQGVEVGWHDYP-MGHEVS-----LEEI 215 (226)
T ss_dssp ---------C-CC----CTGGGGCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEES-CCSSCC-----HHHH
T ss_pred ---------h-hh----cccccCCCEEEEecCCCCccC--HHHHHHHHHHHHHcCCceeEEEec-CCCCcc-----hhhH
Confidence 0 01 113467899999999999999 999999999999998899999999 999874 2346
Q ss_pred HHHHHHHHHhh
Q 002164 888 WETDRWLQKYC 898 (958)
Q Consensus 888 ~~i~~fl~~~l 898 (958)
+.+.+||.++|
T Consensus 216 ~~i~~~l~~~l 226 (226)
T 3cn9_A 216 HDIGAWLRKRL 226 (226)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 77999998874
No 106
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.74 E-value=1.5e-16 Score=163.63 Aligned_cols=181 Identities=15% Similarity=0.112 Sum_probs=135.6
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCccc---------chhhHHHH
Q 002164 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---------NDRFVEQL 739 (958)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~---------~~~~~~~~ 739 (958)
+.|+||++||+... ...| ......|++ ||.|++++. +.+|+|.+.. ........
T Consensus 37 ~~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~-g~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 99 (226)
T 2h1i_A 37 SKPVLLLLHGTGGN-----------ELDL----LPLAEIVDS-EASVLSVRG-NVLENGMPRFFRRLAEGIFDEEDLIFR 99 (226)
T ss_dssp TSCEEEEECCTTCC-----------TTTT----HHHHHHHHT-TSCEEEECC-SEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CCcEEEEEecCCCC-----------hhHH----HHHHHHhcc-CceEEEecC-cccCCcchhhccccCccCcChhhHHHH
Confidence 47999999996421 1112 234555666 999999632 4556665421 11223344
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHh
Q 002164 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVE 819 (958)
Q Consensus 740 ~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (958)
+.++.+.++++.++..+++++++++|||+||.+++.++.++|++++++|+++|......
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------- 158 (226)
T 2h1i_A 100 TKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------
T ss_pred HHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------------------
Confidence 56677777777777667889999999999999999999999999999999998754211
Q ss_pred cCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 820 ~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
......+++|+|+++|++|..++ +..++++++.++..+.++++ ++++++|.+. .+..+.+.+||.++|
T Consensus 159 ---~~~~~~~~~p~l~~~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 159 ---MQLANLAGKSVFIAAGTNDPICS--SAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp ---CCCCCCTTCEEEEEEESSCSSSC--HHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred ---cccccccCCcEEEEeCCCCCcCC--HHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 11123347899999999999998 89999999999998889999 9999999983 345678899998764
No 107
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.74 E-value=1.4e-17 Score=192.07 Aligned_cols=248 Identities=13% Similarity=0.141 Sum_probs=160.6
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcc------cC--CCCCCCCcCcHHHHHH
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQV------RG--SPNEFPRIGSTSVLLW 708 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~l 708 (958)
+..+.++|+++||.+|.+.+|+|++ .+++|+||+.||...........+ .+ ....+..+....++.|
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~-----~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l 113 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFW 113 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSS-----SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHH
T ss_pred EEEEEEEEECCCCcEEEEEEEecCC-----CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHH
Confidence 3467899999999999999999975 245999999998432210000000 00 0001110101125789
Q ss_pred HHCCcEEEEcCCCCCCCCCCcccc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEE
Q 002164 709 LARGFAILGGPTTPIIGEGDEEAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (958)
Q Consensus 709 a~~G~~vl~~~~~~~~G~G~~~~~-~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (958)
+++||+|+.+|+ +|+|.+.+. ..+.....+|+.++++||.+++++| .||+++|+||||++++.+|+..|+.++|+
T Consensus 114 a~~Gy~vv~~D~---RG~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~ai 189 (560)
T 3iii_A 114 VPNDYVVVKVAL---RGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAM 189 (560)
T ss_dssp GGGTCEEEEEEC---TTSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEE
T ss_pred HhCCCEEEEEcC---CCCCCCCCccccCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEE
Confidence 999999999554 566655443 2334578999999999999998887 89999999999999999999998999999
Q ss_pred EEeccCCCCCC---CCCCccccc-chhh----------------------hc---HHHHHhcCcccccCCCCCCEEEEee
Q 002164 788 IARSGAYNRTL---TPFGFQNED-RTLW----------------------EA---TSTYVEMSPFMSANKLKKPILLVHG 838 (958)
Q Consensus 788 v~~~~~~~~~~---~~~~~~~~~-~~~~----------------------~~---~~~~~~~sp~~~~~~~~~P~Lii~G 838 (958)
|+.+|+.|... ..-+..... ...| .. .+.|...++ .+++|++|+|+++|
T Consensus 190 v~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~I~vPvl~v~G 267 (560)
T 3iii_A 190 IPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQIKTPLLTCAS 267 (560)
T ss_dssp EEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGGCCSCEEEEEE
T ss_pred EecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhhCCCCEEEeCC
Confidence 99999877321 000000000 0011 00 012223333 57889999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhccCC
Q 002164 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
..|..+. ...+.+.|++++..+ +.+.+.+ .+|+. ........+..++||++||++..
T Consensus 268 w~D~~~~--~~g~l~~y~~l~~~~--k~l~ih~-~~~~~--~~~~~~~~~~~~~wfD~~LkG~~ 324 (560)
T 3iii_A 268 WSTQGLH--NRGSFEGFKQAASEE--KWLYVHG-RKEWE--SYYARENLERQKSFFDFYLKEEN 324 (560)
T ss_dssp GGGTTTT--HHHHHHHHHHCCCSS--EEEEEES-SCHHH--HHHSHHHHHHHHHHHHHHTSCCC
T ss_pred cCCCccc--chhHHHHHHhccccC--cEEEECC-CCCcC--cccChhHHHHHHHHHHHHhCCCC
Confidence 9997554 567777888776542 3444433 23331 00012456788999999998654
No 108
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.74 E-value=1.7e-17 Score=179.44 Aligned_cols=228 Identities=16% Similarity=0.151 Sum_probs=148.4
Q ss_pred EEEEEEE---eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEE
Q 002164 639 KELIKYQ---RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAI 715 (958)
Q Consensus 639 ~~~~~~~---~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~v 715 (958)
...++|. ..+|..+.+++|.|++.. .+.|+||++||+..... . +.......++++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~----~~~p~vv~lHG~~~~~~-----------~---~~~~~~~~l~~~g~~v 85 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYT----PDRPVVVVQHGVLRNGA-----------D---YRDFWIPAADRHKLLI 85 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCC----TTSCEEEEECCTTCCHH-----------H---HHHHTHHHHHHHTCEE
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCC----CCCcEEEEeCCCCCCHH-----------H---HHHHHHHHHHHCCcEE
Confidence 3456666 678889999999998642 23799999999753211 0 1012355677899999
Q ss_pred EEcCCCCC---------CCC--CCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-c
Q 002164 716 LGGPTTPI---------IGE--GDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-L 783 (958)
Q Consensus 716 l~~~~~~~---------~G~--G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~ 783 (958)
+.++++.. .|+ |.+..........+.|+.++++++.++..+|+++|+|+|||+||.+++.++.++|+ +
T Consensus 86 ~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (304)
T 3d0k_A 86 VAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAP 165 (304)
T ss_dssp EEEECCTTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTT
T ss_pred EEeCCccccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCc
Confidence 99777632 033 33322211222345678899999999877899999999999999999999999985 7
Q ss_pred eeEEEEec-cCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCC--CC-------------
Q 002164 784 FCCGIARS-GAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSG--TL------------- 847 (958)
Q Consensus 784 ~~a~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~--~~------------- 847 (958)
++++|+.+ |.++.......+...... ...+|......+++|+|++||++|..+. .+
T Consensus 166 ~~~~vl~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~ 237 (304)
T 3d0k_A 166 FHAVTAANPGWYTLPTFEHRFPEGLDG--------VGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHR 237 (304)
T ss_dssp CSEEEEESCSSCCCSSTTSBTTTSSBT--------TTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSH
T ss_pred eEEEEEecCcccccCCccccCccccCC--------CCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccH
Confidence 88888655 554422111000000000 0112222223346899999999998741 00
Q ss_pred hHHHHHHHHHHH----hCCCc--EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 848 TMQSDRFFNALK----GHGAL--CRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 848 ~~~~~~~~~~l~----~~g~~--~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
...+.++++.++ ..|++ ++++++||++|.+ ......+.+||....
T Consensus 238 ~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~------~~~~~~~~~~~~~~~ 288 (304)
T 3d0k_A 238 YARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDG------QAMSQVCASLWFDGR 288 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSCH------HHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCch------HHHHHHHHHHHhhhh
Confidence 245667788776 66776 9999999999997 234567788876543
No 109
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.74 E-value=1.4e-16 Score=161.21 Aligned_cols=198 Identities=15% Similarity=0.099 Sum_probs=139.0
Q ss_pred EEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcH--HHHHHHHCCcEEE
Q 002164 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGST--SVLLWLARGFAIL 716 (958)
Q Consensus 639 ~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~la~~G~~vl 716 (958)
.+...++ .+|.++++++|.|.+ +.|+||++||+.... ..| .. ....|+++||.|+
T Consensus 4 ~~~~~~~-~~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~~-----------~~~----~~~~~~~~l~~~G~~v~ 60 (207)
T 3bdi_A 4 LQEEFID-VNGTRVFQRKMVTDS-------NRRSIALFHGYSFTS-----------MDW----DKADLFNNYSKIGYNVY 60 (207)
T ss_dssp CEEEEEE-ETTEEEEEEEECCTT-------CCEEEEEECCTTCCG-----------GGG----GGGTHHHHHHTTTEEEE
T ss_pred ceeEEEe-eCCcEEEEEEEeccC-------CCCeEEEECCCCCCc-----------ccc----chHHHHHHHHhCCCeEE
Confidence 3444444 489999999999864 268999999964221 111 23 5678899999999
Q ss_pred EcCCCCCCCCCCc---ccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 717 GGPTTPIIGEGDE---EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 717 ~~~~~~~~G~G~~---~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
.++ .+|+|.+ ....... ....++.+.+..+.++ .+.++++++|||+||.+++.++.+.|++++++++.+|.
T Consensus 61 ~~d---~~g~g~s~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~ 134 (207)
T 3bdi_A 61 APD---YPGFGRSASSEKYGIDR-GDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPA 134 (207)
T ss_dssp EEC---CTTSTTSCCCTTTCCTT-CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred EEc---CCcccccCcccCCCCCc-chHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCc
Confidence 954 4566666 3321110 0233333444444443 24469999999999999999999999999999999886
Q ss_pred CCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002164 794 YNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (958)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~ 873 (958)
... .+ ...+.++++|+|+++|++|..++ +....++++.++ ++++++++++
T Consensus 135 ~~~---~~---------------------~~~~~~~~~p~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~ 184 (207)
T 3bdi_A 135 WVE---SL---------------------KGDMKKIRQKTLLVWGSKDHVVP--IALSKEYASIIS----GSRLEIVEGS 184 (207)
T ss_dssp SCG---GG---------------------HHHHTTCCSCEEEEEETTCTTTT--HHHHHHHHHHST----TCEEEEETTC
T ss_pred ccc---ch---------------------hHHHhhccCCEEEEEECCCCccc--hHHHHHHHHhcC----CceEEEeCCC
Confidence 210 00 12345678999999999999998 888888887763 4689999999
Q ss_pred CccCCCcccHHHHHHHHHHHHHH
Q 002164 874 SHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 874 ~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
+|.+. .+....+.+.+.+||++
T Consensus 185 ~H~~~-~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 185 GHPVY-IEKPEEFVRITVDFLRN 206 (207)
T ss_dssp CSCHH-HHSHHHHHHHHHHHHHT
T ss_pred CCCcc-ccCHHHHHHHHHHHHhh
Confidence 99863 34456677778888764
No 110
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.74 E-value=5.6e-16 Score=168.76 Aligned_cols=268 Identities=13% Similarity=0.163 Sum_probs=177.0
Q ss_pred CCCCceecCC----CCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccC
Q 002164 110 PLPALSFSPQ----RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGF 185 (958)
Q Consensus 110 ~~~~~~~SPD----G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~ 185 (958)
.+..++|||+ |+.|+..+.+ +.|.+|++.. +.......+.++
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D---------------------------------~~v~vW~~~~-~~~~~~~~l~gh 79 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLD---------------------------------DLVKVWKWRD-ERLDLQWSLEGH 79 (321)
T ss_dssp CEEEEEEC-------CEEEEEETT---------------------------------SCEEEEEEET-TEEEEEEEECCC
T ss_pred cEEEEEEecCCCCCCCEEEEEcCC---------------------------------CCEEEEECCC-CCeeeeeeeccC
Confidence 5678899885 5678777765 4788998854 111112234432
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCC
Q 002164 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (958)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (958)
...+....|+|+++.++... ....|.+||+.+++........... +..++|+|||+.|+...
T Consensus 80 --~~~v~~~~~~~~~~~l~s~s---------~D~~i~lWd~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~g~--- 141 (321)
T 3ow8_A 80 --QLGVVSVDISHTLPIAASSS---------LDAHIRLWDLENGKQIKSIDAGPVD----AWTLAFSPDSQYLATGT--- 141 (321)
T ss_dssp --SSCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCTTC----CCCEEECTTSSEEEEEC---
T ss_pred --CCCEEEEEECCCCCEEEEEe---------CCCcEEEEECCCCCEEEEEeCCCcc----EEEEEECCCCCEEEEEc---
Confidence 24688899999999888754 2568999999988765443322222 56899999999999761
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccccCCC
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPD 342 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpD 342 (958)
....+.++++ +++. ..+... ..+..++||||
T Consensus 142 ----------------------------------------------~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 142 ----------------------------------------------HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPD 175 (321)
T ss_dssp ----------------------------------------------TTSEEEEEETTTCSEEEEEECSSSCEEEEEECTT
T ss_pred ----------------------------------------------CCCcEEEEEcCCCceeEEecCCCceEEEEEECCC
Confidence 2245777777 5533 333333 56788999999
Q ss_pred CcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEecc
Q 002164 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (958)
Q Consensus 343 Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 421 (958)
|++|+..+.+ +.|.+||+.+++. ..+..+ ...+..+.|+|||+.|+..
T Consensus 176 g~~lasg~~d-------------g~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spd~~~l~s~----- 224 (321)
T 3ow8_A 176 GKYLASGAID-------------GIINIFDIATGKLLHTLEGH-------------AMPIRSLTFSPDSQLLVTA----- 224 (321)
T ss_dssp SSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCCCEEEECTTSCEEEEE-----
T ss_pred CCEEEEEcCC-------------CeEEEEECCCCcEEEEEccc-------------CCceeEEEEcCCCCEEEEE-----
Confidence 9999988743 4899999986654 333221 1345789999999987762
Q ss_pred CCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecc
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 501 (958)
+..+.|.+|++ ..+.....+..+...+..++|+|||+.|+..+.++. .+|| ++.++ +....+..
T Consensus 225 --------s~dg~i~iwd~--~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~--v~iw--d~~~~--~~~~~~~~ 288 (321)
T 3ow8_A 225 --------SDDGYIKIYDV--QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS--VKVW--DVGTR--TCVHTFFD 288 (321)
T ss_dssp --------CTTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEE--ETTTT--EEEEEECC
T ss_pred --------cCCCeEEEEEC--CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc--EEEE--eCCCC--EEEEEEcC
Confidence 45567899996 233334445556667788999999999887765443 4454 55553 33333434
Q ss_pred CCccccCCCCCCceEeccCCceEEEEe
Q 002164 502 SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
....+.. ++|+|||+.|+...
T Consensus 289 h~~~v~~------v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 289 HQDQVWG------VKYNGNGSKIVSVG 309 (321)
T ss_dssp CSSCEEE------EEECTTSSEEEEEE
T ss_pred CCCcEEE------EEECCCCCEEEEEe
Confidence 4444444 78999999988765
No 111
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.74 E-value=1.8e-15 Score=180.59 Aligned_cols=329 Identities=11% Similarity=0.069 Sum_probs=201.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
....++|||||++||+.... .+.+|++.. + ...+.++++. .
T Consensus 20 ~~~~~~~spdg~~l~~~~~~----------------------------------~v~l~~~~~-~--~~~~~~~~h~--~ 60 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNGT----------------------------------SVYTVPVGS-L--TDTEIYTEHS--H 60 (611)
T ss_dssp CCCCCEECTTSSEEEEEETT----------------------------------EEEEEETTC-S--SCCEEECCCS--S
T ss_pred ceeEEeeCCCCCEEEeCCCC----------------------------------EEEEecCCC-c--ccCeEecCCC--C
Confidence 35578899999999998753 788999853 2 3445565533 4
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceee---ccCCCCccccccccceEEecCCeEEEEEecCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP---LFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~---lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (958)
.+...+|||||++||... ....|.+||+.+++... +..... .+..++|+|||+.|+.......
T Consensus 61 ~v~~~~~spdg~~lasg~---------~d~~v~lWd~~~~~~~~~~~~~~~~~-----~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGD---------VHGNVRIWDTTQTTHILKTTIPVFSG-----PVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp CEEEEEECTTSSEEEEEE---------TTSEEEEEESSSTTCCEEEEEECSSS-----CEEEEEECTTSCEEEEEECCSS
T ss_pred ceEEEEECCCCcEEEEEe---------CCCCEEEeECCCCcceeeEeecccCC-----ceEEEEECCCCCEEEEEECCCC
Confidence 689999999999999865 25678888987554321 222222 2779999999999987621100
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCCC-ccccccccCCCCcE
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKY 345 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDGk~ 345 (958)
....+++++.......+... ..+..++|+|||+.
T Consensus 127 ---------------------------------------------~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~ 161 (611)
T 1nr0_A 127 ---------------------------------------------RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPF 161 (611)
T ss_dssp ---------------------------------------------CSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSC
T ss_pred ---------------------------------------------ceeEEEEeeCCCCcceecCCCCCceEEEECCCCCe
Confidence 11345555542223344444 67889999999985
Q ss_pred -EEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCC
Q 002164 346 -ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (958)
Q Consensus 346 -l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~ 423 (958)
|+..+. ++.+.+||....+.. .+..+ ...+..++|+|||+.|+..
T Consensus 162 ~l~s~s~-------------D~~v~lwd~~~~~~~~~l~~H-------------~~~V~~v~fspdg~~las~------- 208 (611)
T 1nr0_A 162 RIISGSD-------------DNTVAIFEGPPFKFKSTFGEH-------------TKFVHSVRYNPDGSLFAST------- 208 (611)
T ss_dssp EEEEEET-------------TSCEEEEETTTBEEEEEECCC-------------SSCEEEEEECTTSSEEEEE-------
T ss_pred EEEEEeC-------------CCeEEEEECCCCeEeeeeccc-------------cCceEEEEECCCCCEEEEE-------
Confidence 555542 348999998765432 22221 2456789999999977652
Q ss_pred CcccccccCCeEEEEeCCCCCCCCceEEE-------eeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcE
Q 002164 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILH-------KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (958)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-------~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 496 (958)
+..+.|.+|+. .++.....+. .+...+..++|+|||+.|+..+.++. +.++++.++ +..
T Consensus 209 ------s~D~~i~lwd~--~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~----v~lWd~~~~--~~~ 274 (611)
T 1nr0_A 209 ------GGDGTIVLYNG--VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT----IKIWNVATL--KVE 274 (611)
T ss_dssp ------ETTSCEEEEET--TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE----EEEEETTTT--EEE
T ss_pred ------ECCCcEEEEEC--CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe----EEEEeCCCC--cee
Confidence 45667899985 2333333332 34556778999999999987765443 444455543 222
Q ss_pred EEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCccccc
Q 002164 497 ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYY 576 (958)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~ 576 (958)
........ ... .......+++.++.... + ..+.+||+.+++..+.......
T Consensus 275 ~~~~~~~~-~~~----~~~~~~~~~~~l~s~s~-------------d--------~~i~~~~~~~~~~~~~~~gh~~--- 325 (611)
T 1nr0_A 275 KTIPVGTR-IED----QQLGIIWTKQALVSISA-------------N--------GFINFVNPELGSIDQVRYGHNK--- 325 (611)
T ss_dssp EEEECCSS-GGG----CEEEEEECSSCEEEEET-------------T--------CCEEEEETTTTEEEEEECCCSS---
T ss_pred eeecCCCC-ccc----eeEEEEEcCCEEEEEeC-------------C--------CcEEEEeCCCCCcceEEcCCCC---
Confidence 22111100 000 00122225666665542 1 1488899887765444332221
Q ss_pred ceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEe
Q 002164 577 ETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQI 624 (958)
Q Consensus 577 ~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~L 624 (958)
.+. ..+|+|||+.++..... ..+.++++.+++...+
T Consensus 326 -~v~-------~l~~spdg~~l~s~s~D----~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 326 -AIT-------ALSSSADGKTLFSADAE----GHINSWDISTGISNRV 361 (611)
T ss_dssp -CEE-------EEEECTTSSEEEEEETT----SCEEEEETTTCCEEEC
T ss_pred -CEE-------EEEEeCCCCEEEEEeCC----CcEEEEECCCCceeee
Confidence 122 25789999877654432 4689999988875543
No 112
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.74 E-value=1.3e-16 Score=165.64 Aligned_cols=189 Identities=14% Similarity=0.126 Sum_probs=133.1
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC-----CcEEEEcCCC----------------CCCCCC
Q 002164 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-----GFAILGGPTT----------------PIIGEG 727 (958)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-----G~~vl~~~~~----------------~~~G~G 727 (958)
+.|+||++||...... .| ..+...|+.+ ||.|+.++.. +..|.+
T Consensus 22 ~~p~vv~lHG~g~~~~-----------~~----~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 86 (239)
T 3u0v_A 22 HSASLIFLHGSGDSGQ-----------GL----RMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKIT 86 (239)
T ss_dssp CCEEEEEECCTTCCHH-----------HH----HHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSS
T ss_pred CCcEEEEEecCCCchh-----------hH----HHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCC
Confidence 4899999999532110 01 1234455554 6888885541 222222
Q ss_pred Cccc-chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccc
Q 002164 728 DEEA-NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE 806 (958)
Q Consensus 728 ~~~~-~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~ 806 (958)
.... .........+++...++.+.+. .+|.++++|+|||+||++++.++.++|++++++|+++|..+....
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------- 158 (239)
T 3u0v_A 87 NDCPEHLESIDVMCQVLTDLIDEEVKS-GIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------- 158 (239)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHh-CCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------
Confidence 2211 1123445566666666666553 478899999999999999999999999999999999987542110
Q ss_pred cchhhhcHHHHHhcCcccccCCCCCC-EEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHH
Q 002164 807 DRTLWEATSTYVEMSPFMSANKLKKP-ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMH 885 (958)
Q Consensus 807 ~~~~~~~~~~~~~~sp~~~~~~~~~P-~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~ 885 (958)
.. ..+. ....++| +|++||++|..+| +++++++++.|+..+.++++.++++++|.+. .+
T Consensus 159 ---~~---~~~~-------~~~~~~pp~li~~G~~D~~v~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~ 218 (239)
T 3u0v_A 159 ---VY---QALQ-------KSNGVLPELFQCHGTADELVL--HSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KT 218 (239)
T ss_dssp ---HH---HHHH-------HCCSCCCCEEEEEETTCSSSC--HHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HH
T ss_pred ---HH---HHHH-------hhccCCCCEEEEeeCCCCccC--HHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HH
Confidence 00 0010 1233566 9999999999999 9999999999999999999999999999985 45
Q ss_pred HHHHHHHHHHHhhcc
Q 002164 886 VLWETDRWLQKYCVS 900 (958)
Q Consensus 886 ~~~~i~~fl~~~l~~ 900 (958)
..+.+.+||.+++..
T Consensus 219 ~~~~~~~~l~~~l~~ 233 (239)
T 3u0v_A 219 ELDILKLWILTKLPG 233 (239)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhCCC
Confidence 578899999999854
No 113
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.73 E-value=7.6e-18 Score=179.10 Aligned_cols=200 Identities=13% Similarity=0.108 Sum_probs=136.4
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHH----HHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHH
Q 002164 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW----LARGFAILGGPTTPIIGEGDEEANDRFVEQLVACA 743 (958)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----a~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~ 743 (958)
++.|+||++|||++..+.. + .......+..| +++||.|+++++++ .+.. .....++|+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~------~----~~~~~~~~~~L~~~a~~~g~~vi~~d~r~---~~~~-----~~~~~~~d~ 100 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPEN------T----PNDFNQLANTIKSMDTESTVCQYSIEYRL---SPEI-----TNPRNLYDA 100 (273)
T ss_dssp TCCEEEEEECCSTTTCTTC------C----GGGGHHHHHHHHHHCTTCCEEEEEECCCC---TTTS-----CTTHHHHHH
T ss_pred CCCeEEEEECCCcccCCcC------C----hHHHHHHHHHHhhhhccCCcEEEEeeccc---CCCC-----CCCcHHHHH
Confidence 3589999999976432110 0 01112345556 57999999977643 2221 123567899
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----------------CCceeEEEEeccCCCCCCCCCCccc-
Q 002164 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-----------------PHLFCCGIARSGAYNRTLTPFGFQN- 805 (958)
Q Consensus 744 ~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----------------p~~~~a~v~~~~~~~~~~~~~~~~~- 805 (958)
.++++++.++ ++.++++|+|||+||.+++.++.+. |++++++|+.+|+++..........
T Consensus 101 ~~~~~~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 178 (273)
T 1vkh_A 101 VSNITRLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEY 178 (273)
T ss_dssp HHHHHHHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGG
T ss_pred HHHHHHHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccH
Confidence 9999999887 5678999999999999999999885 6889999999987652110000000
Q ss_pred ---------ccchhhh-cHHHHHhcCccc--ccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002164 806 ---------EDRTLWE-ATSTYVEMSPFM--SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (958)
Q Consensus 806 ---------~~~~~~~-~~~~~~~~sp~~--~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~ 873 (958)
.....|. ... ..++.. ...++++|+|++||++|..+| +.+++++++.++..+.++++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~lii~G~~D~~vp--~~~~~~~~~~l~~~~~~~~~~~~~~~ 253 (273)
T 1vkh_A 179 DCFTRLAFPDGIQMYEEEPS---RVMPYVKKALSRFSIDMHLVHSYSDELLT--LRQTNCLISCLQDYQLSFKLYLDDLG 253 (273)
T ss_dssp HHHHHHHCTTCGGGCCCCHH---HHHHHHHHHHHHHTCEEEEEEETTCSSCC--THHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHHHhcccccchhhccc---ccChhhhhcccccCCCEEEEecCCcCCCC--hHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 0000011 110 111100 112267899999999999999 99999999999999999999999999
Q ss_pred CccCCCcccHHHHHHHHHHHH
Q 002164 874 SHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 874 ~H~~~~~~~~~~~~~~i~~fl 894 (958)
+|.+.. +. .++.+.+.+||
T Consensus 254 gH~~~~-~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 254 LHNDVY-KN-GKVAKYIFDNI 272 (273)
T ss_dssp SGGGGG-GC-HHHHHHHHHTC
T ss_pred cccccc-cC-hHHHHHHHHHc
Confidence 999743 33 66777777775
No 114
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.73 E-value=4.3e-17 Score=178.02 Aligned_cols=216 Identities=8% Similarity=0.026 Sum_probs=146.5
Q ss_pred EEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-HCCcEEEEcCCCCCCCCCCcc
Q 002164 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPIIGEGDEE 730 (958)
Q Consensus 652 l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~vl~~~~~~~~G~G~~~ 730 (958)
+.+++|.|.+ ++.|+||++|||++..+. .. ........|+ +.||.|+++++++. +.
T Consensus 84 ~~~~~~~p~~------~~~p~vv~lHGgg~~~~~--------~~----~~~~~~~~la~~~g~~vi~~D~r~~---~~-- 140 (326)
T 3d7r_A 84 MQVFRFNFRH------QIDKKILYIHGGFNALQP--------SP----FHWRLLDKITLSTLYEVVLPIYPKT---PE-- 140 (326)
T ss_dssp EEEEEEESTT------CCSSEEEEECCSTTTSCC--------CH----HHHHHHHHHHHHHCSEEEEECCCCT---TT--
T ss_pred EEEEEEeeCC------CCCeEEEEECCCcccCCC--------CH----HHHHHHHHHHHHhCCEEEEEeCCCC---CC--
Confidence 5567788864 136999999997542211 00 1112344566 46999999776532 21
Q ss_pred cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEeccCCCCCCCCCCcc-c
Q 002164 731 ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQ-N 805 (958)
Q Consensus 731 ~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~~~~~~~~~~~-~ 805 (958)
..+...++|+.++++++.++ +++++++|+|||+||.+|+.++.+.|++ ++++|+.+|.++......... .
T Consensus 141 ---~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 215 (326)
T 3d7r_A 141 ---FHIDDTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDA 215 (326)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHH
T ss_pred ---CCchHHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhh
Confidence 22456789999999999887 6788999999999999999999887665 999999999876543211111 0
Q ss_pred c-cchhh-------hcHHHHH--------hcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEE
Q 002164 806 E-DRTLW-------EATSTYV--------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVI 869 (958)
Q Consensus 806 ~-~~~~~-------~~~~~~~--------~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 869 (958)
. ....+ .....|. ..+|+...-+..+|+||+||++|.. ..++.++.++++..+.++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~----~~~~~~~~~~l~~~~~~~~~~~ 291 (326)
T 3d7r_A 216 LIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMT----HPDMKLFEQMMLQHHQYIEFYD 291 (326)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTT----HHHHHHHHHHHHHTTCCEEEEE
T ss_pred hcccCcccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccc----hHHHHHHHHHHHHCCCcEEEEE
Confidence 0 00000 0001111 1123321111225999999999963 5678889999999999999999
Q ss_pred eCCCCccCCC--cccHHHHHHHHHHHHHHhhc
Q 002164 870 LPFESHGYAA--RESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 870 ~p~~~H~~~~--~~~~~~~~~~i~~fl~~~l~ 899 (958)
+|+++|.+.. .+....+.+.+.+||.+++.
T Consensus 292 ~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 292 YPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp ETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred eCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 9999998753 35667888999999988763
No 115
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.73 E-value=2e-16 Score=167.62 Aligned_cols=202 Identities=15% Similarity=0.141 Sum_probs=142.9
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAAV 747 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av 747 (958)
.|+||++||..... .. ....+..|+++||.|++ .+.+|+|.+... ........+|+.+++
T Consensus 40 ~~~vv~~HG~~~~~-----------~~----~~~~~~~l~~~G~~v~~---~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 101 (270)
T 3rm3_A 40 PVGVLLVHGFTGTP-----------HS----MRPLAEAYAKAGYTVCL---PRLKGHGTHYEDMERTTFHDWVASVEEGY 101 (270)
T ss_dssp SEEEEEECCTTCCG-----------GG----THHHHHHHHHTTCEEEE---CCCTTCSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCh-----------hH----HHHHHHHHHHCCCEEEE---eCCCCCCCCccccccCCHHHHHHHHHHHH
Confidence 59999999964211 11 22456778899999999 566688877542 233567789999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC-----------CC------Ccccc----
Q 002164 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-----------PF------GFQNE---- 806 (958)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-----------~~------~~~~~---- 806 (958)
+++.++ .++++++|||+||.+++.++.++|+ ++++|+++|..+.... .+ .+...
T Consensus 102 ~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3rm3_A 102 GWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKE 176 (270)
T ss_dssp HHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCC
T ss_pred HHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHh
Confidence 999876 4699999999999999999999998 9999999986542100 00 00000
Q ss_pred ---cchhhhcHHHHHh--cCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc
Q 002164 807 ---DRTLWEATSTYVE--MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE 881 (958)
Q Consensus 807 ---~~~~~~~~~~~~~--~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~ 881 (958)
..........+.. .+....+.++++|+|+++|++|..+| +..+.++++.++. .+++++++|+++|.+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~ 252 (270)
T 3rm3_A 177 LAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVP--PGNADIIFQGISS--TEKEIVRLRNSYHVATLDY 252 (270)
T ss_dssp CCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHSCC--SSEEEEEESSCCSCGGGST
T ss_pred hcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccC--HHHHHHHHHhcCC--CcceEEEeCCCCcccccCc
Confidence 0000000000000 01223566789999999999999998 8889888888754 3679999999999986554
Q ss_pred cHHHHHHHHHHHHHHhh
Q 002164 882 SIMHVLWETDRWLQKYC 898 (958)
Q Consensus 882 ~~~~~~~~i~~fl~~~l 898 (958)
....+.+.+.+||+++.
T Consensus 253 ~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 253 DQPMIIERSLEFFAKHA 269 (270)
T ss_dssp THHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 55788999999998864
No 116
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.73 E-value=1.6e-16 Score=176.01 Aligned_cols=284 Identities=10% Similarity=0.040 Sum_probs=164.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++||..+.+ . . ...+..+++|+... +...............
T Consensus 44 ~V~~v~fSpDG~~las~s~d-----------------------~-~---~~wd~~v~~~~~~~-~~~~~~~~~~~~~~~~ 95 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSL-----------------------S-S---RTWGGSIWVFKDPE-GAPNESLCTAGVQTEA 95 (357)
T ss_dssp EEEEEEECSSSCEEEEEECS-----------------------S-S---SSCCEEEEEESSCC----CGGGCSEEEECSS
T ss_pred CEEEEEECCCCCEEEEEcCC-----------------------C-C---ccccCeEEEEECCC-CCcceeEecccCCCCC
Confidence 46789999999999988764 0 0 01124688888744 2111111111111223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+...+|+||++.|+- . . ...|.+||+.+++...............+..++|+|||+.|+...
T Consensus 96 ~V~~~~~s~d~~~l~~-s-------~--dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs------- 158 (357)
T 4g56_B 96 GVTDVAWVSEKGILVA-S-------D--SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG------- 158 (357)
T ss_dssp CEEEEEEETTTEEEEE-E-------T--TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE-------
T ss_pred CEEEEEEcCCCCEEEE-E-------C--CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe-------
Confidence 5888999999975543 3 1 346888888877654322111101112277899999999998761
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~SpDGk~l 346 (958)
....|.++++ +++.. .+... ..+..++|+|+++.+
T Consensus 159 ------------------------------------------~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 159 ------------------------------------------KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 2244777788 77544 34333 678889999999865
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
+++... ++.|.+||+.+++......... ....+..+.|+||+..++..
T Consensus 197 ~~s~~~------------dg~v~~wd~~~~~~~~~~~~~~----------~~~~v~~v~~sp~~~~~la~---------- 244 (357)
T 4g56_B 197 FLSCGE------------DGRILLWDTRKPKPATRIDFCA----------SDTIPTSVTWHPEKDDTFAC---------- 244 (357)
T ss_dssp EEEEET------------TSCEEECCTTSSSCBCBCCCTT----------CCSCEEEEEECTTSTTEEEE----------
T ss_pred eeeecc------------CCceEEEECCCCceeeeeeecc----------ccccccchhhhhcccceEEE----------
Confidence 554422 3489999998554322111110 11234678999998766553
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccc
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDV 506 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 506 (958)
.+..+.|++|++ .++.....+......+..++|||||+.++.+...++ .|+++|+.++ +... .......+
T Consensus 245 --g~~d~~i~~wd~--~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~---~i~iwd~~~~--~~~~-~~~H~~~V 314 (357)
T 4g56_B 245 --GDETGNVSLVNI--KNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC---TVAVLDADFS--EVFR-DLSHRDFV 314 (357)
T ss_dssp --EESSSCEEEEES--SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS---CEEEECTTSC--EEEE-ECCCSSCE
T ss_pred --eecccceeEEEC--CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC---EEEEEECCCC--cEeE-ECCCCCCE
Confidence 134557899996 344455556566667888999999866444443332 2556677664 2222 22333334
Q ss_pred cCCCCCCceEecc-CCceEEEEe
Q 002164 507 YSDPGSPMMRRTS-TGTYVIAKI 528 (958)
Q Consensus 507 ~~~~~~~~~~~sp-dG~~l~~~~ 528 (958)
.. ++||| ||+.|+...
T Consensus 315 ~~------vafsP~d~~~l~s~s 331 (357)
T 4g56_B 315 TG------VAWSPLDHSKFTTVG 331 (357)
T ss_dssp EE------EEECSSSTTEEEEEE
T ss_pred EE------EEEeCCCCCEEEEEc
Confidence 44 78998 788887665
No 117
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.72 E-value=2.4e-16 Score=161.74 Aligned_cols=196 Identities=14% Similarity=0.103 Sum_probs=138.2
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G 727 (958)
++..++..++.|.. .+.|+||++||+... ...| ......|++ ||.|+.++.....+.|
T Consensus 14 ~~~~l~~~~~~~~~------~~~p~vv~lHG~g~~-----------~~~~----~~~~~~l~~-~~~vv~~d~~~~~~~g 71 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK------ESRECLFLLHGSGVD-----------ETTL----VPLARRIAP-TATLVAARGRIPQEDG 71 (223)
T ss_dssp CSSSSCEEEESTTS------SCCCEEEEECCTTBC-----------TTTT----HHHHHHHCT-TSEEEEECCSEEETTE
T ss_pred cCCCceEEEeCCCC------CCCCEEEEEecCCCC-----------HHHH----HHHHHhcCC-CceEEEeCCCCCcCCc
Confidence 34556555554432 124899999996421 1112 123445554 9999996643211101
Q ss_pred Ccc--------cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC
Q 002164 728 DEE--------ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT 799 (958)
Q Consensus 728 ~~~--------~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~ 799 (958)
.++ ..........+|+.+.++++.++..+|+++++|+|||+||.+++.++.++|++++++|+++|......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~- 150 (223)
T 3b5e_A 72 FRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH- 150 (223)
T ss_dssp EESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-
T ss_pred cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc-
Confidence 111 11223456678888888888877567889999999999999999999999999999999998654210
Q ss_pred CCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCC
Q 002164 800 PFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAA 879 (958)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~ 879 (958)
......+++|+|++||++|..+| ++.++ +++.++..|.++++++++ ++|.+.
T Consensus 151 -----------------------~~~~~~~~~P~li~~G~~D~~v~--~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~- 202 (223)
T 3b5e_A 151 -----------------------VPATDLAGIRTLIIAGAADETYG--PFVPA-LVTLLSRHGAEVDARIIP-SGHDIG- 202 (223)
T ss_dssp -----------------------CCCCCCTTCEEEEEEETTCTTTG--GGHHH-HHHHHHHTTCEEEEEEES-CCSCCC-
T ss_pred -----------------------cccccccCCCEEEEeCCCCCcCC--HHHHH-HHHHHHHCCCceEEEEec-CCCCcC-
Confidence 01223457899999999999998 89999 999999999999999999 899984
Q ss_pred cccHHHHHHHHHHHHHHhh
Q 002164 880 RESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 880 ~~~~~~~~~~i~~fl~~~l 898 (958)
.+..+.+.+||.+.+
T Consensus 203 ----~~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 203 ----DPDAAIVRQWLAGPI 217 (223)
T ss_dssp ----HHHHHHHHHHHHCC-
T ss_pred ----HHHHHHHHHHHHhhh
Confidence 223567888987754
No 118
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.72 E-value=4e-16 Score=168.99 Aligned_cols=227 Identities=15% Similarity=0.132 Sum_probs=145.4
Q ss_pred cEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEE
Q 002164 638 QKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILG 717 (958)
Q Consensus 638 ~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~ 717 (958)
..+.+++.. +|..+....+.+..- ++..|+||++||.+... .. ....+..|+++||.|++
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~p~vv~~hG~~~~~-----------~~----~~~~~~~l~~~g~~v~~ 78 (315)
T 4f0j_A 19 PVHYLDFTS-QGQPLSMAYLDVAPK----KANGRTILLMHGKNFCA-----------GT----WERTIDVLADAGYRVIA 78 (315)
T ss_dssp CCEEEEEEE-TTEEEEEEEEEECCS----SCCSCEEEEECCTTCCG-----------GG----GHHHHHHHHHTTCEEEE
T ss_pred cceeEEEec-CCCCeeEEEeecCCC----CCCCCeEEEEcCCCCcc-----------hH----HHHHHHHHHHCCCeEEE
Confidence 456777765 666666665554321 22379999999964221 11 12456678899999999
Q ss_pred cCCCCCCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCC
Q 002164 718 GPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (958)
Q Consensus 718 ~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (958)
.+.+|+|.+.... .......+|+.++++. ++.++++++|||+||.+++.++.++|++++++|++++..
T Consensus 79 ---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 149 (315)
T 4f0j_A 79 ---VDQVGFCKSSKPAHYQYSFQQLAANTHALLER------LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149 (315)
T ss_dssp ---ECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHH------TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred ---eecCCCCCCCCCCccccCHHHHHHHHHHHHHH------hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcc
Confidence 5556777765432 2334555555555443 244689999999999999999999999999999999853
Q ss_pred CCCCCCCCcc-----------------------------cccchh---hh---------------------cHHHHHhcC
Q 002164 795 NRTLTPFGFQ-----------------------------NEDRTL---WE---------------------ATSTYVEMS 821 (958)
Q Consensus 795 ~~~~~~~~~~-----------------------------~~~~~~---~~---------------------~~~~~~~~s 821 (958)
.......... ...... |. ........+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (315)
T 4f0j_A 150 LEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQP 229 (315)
T ss_dssp SSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCC
T ss_pred cCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccch
Confidence 2110000000 000000 00 001111223
Q ss_pred cccccCCCCCCEEEEeeCCCCCCCCChHHH------------HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHH
Q 002164 822 PFMSANKLKKPILLVHGEEDNNSGTLTMQS------------DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (958)
Q Consensus 822 p~~~~~~~~~P~Lii~G~~D~~v~~~~~~~------------~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~ 889 (958)
....+.++++|+|+++|++|..+| ..+. .+..+.+......+++++++++||... .++...+.+.
T Consensus 230 ~~~~l~~~~~P~lii~G~~D~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~p~~~~~~ 306 (315)
T 4f0j_A 230 VVYELDRLQMPTLLLIGEKDNTAI--GKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQ-IQAPERFHQA 306 (315)
T ss_dssp CGGGGGGCCSCEEEEEETTCCCCT--TGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHH-HHSHHHHHHH
T ss_pred hhhhcccCCCCeEEEEecCCCcCc--cccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchh-hhCHHHHHHH
Confidence 445677889999999999999987 5443 445555555555789999999999864 4566777788
Q ss_pred HHHHHHH
Q 002164 890 TDRWLQK 896 (958)
Q Consensus 890 i~~fl~~ 896 (958)
|.+||++
T Consensus 307 i~~fl~~ 313 (315)
T 4f0j_A 307 LLEGLQT 313 (315)
T ss_dssp HHHHHCC
T ss_pred HHHHhcc
Confidence 8888764
No 119
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.72 E-value=1.6e-16 Score=166.37 Aligned_cols=180 Identities=16% Similarity=0.083 Sum_probs=131.2
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCccc---------chhhHHHH
Q 002164 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---------NDRFVEQL 739 (958)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~---------~~~~~~~~ 739 (958)
+.|+||++||+..... . ....+..|++ +|.|++++. +..|+|.+.. ........
T Consensus 61 ~~p~vv~~HG~~~~~~-----------~----~~~~~~~l~~-~~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 123 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDEN-----------Q----FFDFGARLLP-QATILSPVG-DVSEHGAARFFRRTGEGVYDMVDLERA 123 (251)
T ss_dssp TSCEEEEECCTTCCHH-----------H----HHHHHHHHST-TSEEEEECC-SEEETTEEESSCBCGGGCBCHHHHHHH
T ss_pred CCcEEEEEeCCCCCHh-----------H----HHHHHHhcCC-CceEEEecC-CcCCCCCcccccCCCCCcCCHHHHHHH
Confidence 3799999999642110 0 1123444544 599999632 4455554321 11223455
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHh
Q 002164 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVE 819 (958)
Q Consensus 740 ~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (958)
+.|+.++++++.++. +.++++|+|||+||++++.++.++|++++++|+++|..+...
T Consensus 124 ~~~~~~~l~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~--------------------- 180 (251)
T 2r8b_A 124 TGKMADFIKANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------------------
T ss_pred HHHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc---------------------
Confidence 788888888887764 678999999999999999999999999999999998754221
Q ss_pred cCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 820 ~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
......+++|+|++||++|..+| ++.+++++++++..+.++++ .+++++|.+. .+..+.+.+||.+++.
T Consensus 181 ---~~~~~~~~~P~li~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 181 ---KISPAKPTRRVLITAGERDPICP--VQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAYGG 249 (251)
T ss_dssp ---CCCCCCTTCEEEEEEETTCTTSC--HHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGGC-
T ss_pred ---cccccccCCcEEEeccCCCccCC--HHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHhcC
Confidence 11223457899999999999998 89999999999987778887 5666799983 3346788999999875
No 120
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.6e-15 Score=168.25 Aligned_cols=287 Identities=8% Similarity=0.046 Sum_probs=189.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++|+....+ +.|.+|++.. + .....+.. +..
T Consensus 34 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~vwd~~~-~--~~~~~~~~--h~~ 75 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKD---------------------------------SSASVWYSLN-G--ERLGTLDG--HTG 75 (369)
T ss_dssp CEEEEEECTTSCEEEEEESS---------------------------------SCEEEEETTT-C--CEEEEECC--CSS
T ss_pred eEEEEEEcCCCCEEEEEeCC---------------------------------CEEEEEeCCC-c--hhhhhhhh--cCC
Confidence 46788999999999988765 4789999854 2 23444443 334
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..+.|+|||++|+.... ...|.+|++.+++.......... +..++|+|||+.|++.......
T Consensus 76 ~v~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~~~~-- 139 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSA---------DYSIKLWDVSNGQCVATWKSPVP-----VKRVEFSPCGNYFLAILDNVMK-- 139 (369)
T ss_dssp CEEEEEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECSSC-----EEEEEECTTSSEEEEEECCBTT--
T ss_pred cEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCcEEEEeecCCC-----eEEEEEccCCCEEEEecCCccC--
Confidence 7899999999999988652 56899999998887665553332 7789999999999977221000
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC------------eeeecCCC---cc
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG------------TVKEIGPP---AV 333 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g------------~~~~l~~~---~~ 333 (958)
....|.++++ .+ ....+... ..
T Consensus 140 ------------------------------------------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 140 ------------------------------------------NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp ------------------------------------------BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred ------------------------------------------CCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 1133445544 22 11112111 26
Q ss_pred ccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC-ceE-EEeccCCccccCcccccccccCcceeeeecCCC
Q 002164 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 334 ~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~-~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~ 411 (958)
+..++|+|||+.|+.... ++.|.+||+.. ... ..+..+. ..+..+.|+|||+
T Consensus 178 ~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHK-------------DGKISKYDVSNNYEYVDSIDLHE-------------KSISDMQFSPDLT 231 (369)
T ss_dssp EEEEEECGGGCEEEEEET-------------TSEEEEEETTTTTEEEEEEECCS-------------SCEEEEEECTTSS
T ss_pred eeEEEEcCCCCEEEEEcC-------------CCEEEEEECCCCcEeEEEEecCC-------------CceeEEEECCCCC
Confidence 788899999999988763 34899999986 333 3333221 3457899999999
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEecccc----------ce
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTR----------RT 481 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~----------~~ 481 (958)
.|+.. +..+.|++|++ ..++..........+..+.|+|+++.|++....+.. ..
T Consensus 232 ~l~~~-------------~~d~~i~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 232 YFITS-------------SRDTNSFLVDV---STLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp EEEEE-------------ETTSEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred EEEEe-------------cCCceEEEEEC---CCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 88773 44567999996 444444444456667789999999999988754421 11
Q ss_pred EEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCC
Q 002164 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (958)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~ 561 (958)
.+.+++...+ +...........+.. ++|+|||++|+....+ ..|.+|++++
T Consensus 296 ~i~~~d~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~l~s~~~d---------------------g~v~iw~~~~ 346 (369)
T 3zwl_B 296 EARFYHKIFE--EEIGRVQGHFGPLNT------VAISPQGTSYASGGED---------------------GFIRLHHFEK 346 (369)
T ss_dssp EEEEEETTTC--CEEEEEECCSSCEEE------EEECTTSSEEEEEETT---------------------SEEEEEEECH
T ss_pred eeEEEecCCC--cchhheecccCcEEE------EEECCCCCEEEEEcCC---------------------CeEEEEECcc
Confidence 4666666653 333333333333333 7899999988877621 2588898875
Q ss_pred Cc
Q 002164 562 GS 563 (958)
Q Consensus 562 g~ 563 (958)
+.
T Consensus 347 ~~ 348 (369)
T 3zwl_B 347 SY 348 (369)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 121
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.72 E-value=1.6e-16 Score=171.33 Aligned_cols=238 Identities=13% Similarity=0.074 Sum_probs=153.8
Q ss_pred cEEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 638 ~~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
+.+.+++.+. .|.++.++ +.|. + .++|+||++||++... +...|... ....+.+++.||+|+
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~-~-----~~~p~vvllHG~~~~~---------~~~~w~~~-~~~~~~~~~~~~~vv 70 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSG-G-----ANSPALYLLDGLRAQD---------DFSGWDIN-TPAFEWYDQSGLSVV 70 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECC-S-----TTBCEEEEECCTTCCS---------SSCHHHHH-CCHHHHHTTSSCEEE
T ss_pred eEEEEEEECccCCCceEEE-ECCC-C-----CCCCEEEEeCCCCCCC---------CcchhhcC-CCHHHHHhcCCeEEE
Confidence 4567777765 46677766 4443 2 2489999999963100 00111100 012345677899999
Q ss_pred EcCCCCCCCCCCccc---------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEE
Q 002164 717 GGPTTPIIGEGDEEA---------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~---------~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (958)
.++..+..++..... ...+.....+|+ +.++.++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 71 ~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l---~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 147 (304)
T 1sfr_A 71 MPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSEL---PGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYA 147 (304)
T ss_dssp EECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHH---HHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEE
T ss_pred EECCCCCccccccCCccccccccccccHHHHHHHHH---HHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEE
Confidence 977754333321100 112222222344 44444433477789999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCc------c--c--ccchhhh--cHHHHHhcCcccccCCC---CCCEEEEeeCCCC----------
Q 002164 788 IARSGAYNRTLTPFGF------Q--N--EDRTLWE--ATSTYVEMSPFMSANKL---KKPILLVHGEEDN---------- 842 (958)
Q Consensus 788 v~~~~~~~~~~~~~~~------~--~--~~~~~~~--~~~~~~~~sp~~~~~~~---~~P~Lii~G~~D~---------- 842 (958)
|+++|.++.....+.. . . .....|. ....+...+|...+.++ ++|++++||+.|.
T Consensus 148 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~ 227 (304)
T 1sfr_A 148 GAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPA 227 (304)
T ss_dssp EEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHH
T ss_pred EEECCccCccccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCcccccccccc
Confidence 9999987643211000 0 0 0000111 11345566777665555 5899999999998
Q ss_pred ----CCCCChHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhcc
Q 002164 843 ----NSGTLTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 843 ----~v~~~~~~~~~~~~~l~~~g-~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
.++ ...+++++++|+..| +++++.+|++++|.+. .....+..++.||.++|..
T Consensus 228 ~~~e~~~--~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~~ 285 (304)
T 1sfr_A 228 KFLEGFV--RTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALGA 285 (304)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHTC
T ss_pred chhHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcCC
Confidence 556 789999999999999 9999999987799752 2345567889999999864
No 122
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.7e-15 Score=169.92 Aligned_cols=282 Identities=11% Similarity=0.144 Sum_probs=176.5
Q ss_pred CCCCCceecCCCC-EEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEc----cCCCCC----Cce
Q 002164 109 PPLPALSFSPQRD-KILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQL----FPDGKL----GQE 179 (958)
Q Consensus 109 ~~~~~~~~SPDG~-~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~----~~dg~~----~~~ 179 (958)
..+..++|||||+ +||....+ +.|.+|++ .. +.. ...
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~d---------------------------------g~i~iw~~~~~~~~-~~~~~~~~~~ 91 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKN---------------------------------SVARLARIVETDQE-GKKYWKLTII 91 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETB---------------------------------TEEEEEEEEEC-------CEEEEEE
T ss_pred CceEEEEECCCCCcEEEEecCC---------------------------------ceEEEEEEecccCC-cccccccccc
Confidence 4688999999999 89887764 36888888 44 210 012
Q ss_pred eeecc-CC-------CCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEE
Q 002164 180 IEIQG-FP-------DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW 251 (958)
Q Consensus 180 ~~lt~-~~-------~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~w 251 (958)
..+.. +. ....+..++|||||++|+.... ...|.+|+..+.....+...... +..++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------dg~i~i~~~~~~~~~~~~~~~~~-----v~~~~~ 157 (425)
T 1r5m_A 92 AELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE---------NGELRLWNKTGALLNVLNFHRAP-----IVSVKW 157 (425)
T ss_dssp EEEECCCCCC------CBCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCEEEEECCCCSC-----EEEEEE
T ss_pred ccccccccccccccCCCCceEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCeeeeccCCCcc-----EEEEEE
Confidence 22221 00 1236889999999999998652 45788888655555555433332 778999
Q ss_pred ecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecC
Q 002164 252 VNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIG 329 (958)
Q Consensus 252 spDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~ 329 (958)
+|||+.|++.. ....|.++++ +++.. .+.
T Consensus 158 ~~~~~~l~~~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 158 NKDGTHIISMD-------------------------------------------------VENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CTTSSEEEEEE-------------------------------------------------TTCCEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEe-------------------------------------------------cCCeEEEEECCCCcEEEEee
Confidence 99999988762 1234666676 55432 222
Q ss_pred CC-cc---------------ccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcc
Q 002164 330 PP-AV---------------YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPI 392 (958)
Q Consensus 330 ~~-~~---------------~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~ 392 (958)
.. .. +..+.|+|++. ++.... .+.+.+||+..+... .+..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~g~i~~~d~~~~~~~~~~~~~-------- 246 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGP-------------KGAIFVYQITEKTPTGKLIGH-------- 246 (425)
T ss_dssp CC---------------CCCBSCCEEEETTE-EEEECG-------------GGCEEEEETTCSSCSEEECCC--------
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcC-------------CCeEEEEEcCCCceeeeeccC--------
Confidence 22 22 78889999876 333332 348999999865332 22211
Q ss_pred cccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEE
Q 002164 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVY 472 (958)
Q Consensus 393 ~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~ 472 (958)
...+..+.|+|||+.++.. +..+.|++|++ ..+.....+......+..+.|+|+| .|+.
T Consensus 247 -----~~~i~~~~~~~~~~~l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~ 305 (425)
T 1r5m_A 247 -----HGPISVLEFNDTNKLLLSA-------------SDDGTLRIWHG--GNGNSQNCFYGHSQSIVSASWVGDD-KVIS 305 (425)
T ss_dssp -----SSCEEEEEEETTTTEEEEE-------------ETTSCEEEECS--SSBSCSEEECCCSSCEEEEEEETTT-EEEE
T ss_pred -----CCceEEEEECCCCCEEEEE-------------cCCCEEEEEEC--CCCccceEecCCCccEEEEEECCCC-EEEE
Confidence 1345789999999977663 34567899986 2344455555566678889999999 5554
Q ss_pred EEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCC
Q 002164 473 ESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIP 552 (958)
Q Consensus 473 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (958)
... + ..|+++++..+ +...........+.. +.|+|||++|+....+ .
T Consensus 306 ~~~-d---~~i~i~d~~~~--~~~~~~~~~~~~i~~------~~~s~~~~~l~~~~~d---------------------g 352 (425)
T 1r5m_A 306 CSM-D---GSVRLWSLKQN--TLLALSIVDGVPIFA------GRISQDGQKYAVAFMD---------------------G 352 (425)
T ss_dssp EET-T---SEEEEEETTTT--EEEEEEECTTCCEEE------EEECTTSSEEEEEETT---------------------S
T ss_pred EeC-C---CcEEEEECCCC--cEeEecccCCccEEE------EEEcCCCCEEEEEECC---------------------C
Confidence 433 3 24666777664 333333332333333 7899999988877521 2
Q ss_pred eEEEEECCCCc
Q 002164 553 FLDLFDINTGS 563 (958)
Q Consensus 553 ~L~~~dl~~g~ 563 (958)
.|.+||+.+++
T Consensus 353 ~i~i~~~~~~~ 363 (425)
T 1r5m_A 353 QVNVYDLKKLN 363 (425)
T ss_dssp CEEEEECHHHH
T ss_pred eEEEEECCCCc
Confidence 48889987665
No 123
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.71 E-value=2.3e-15 Score=181.89 Aligned_cols=273 Identities=14% Similarity=0.097 Sum_probs=177.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..++|||||++|||+.+.. +++...||++|+++|+..+.+.... . ...++|+ ||+.|+|+.......
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~----G~~~~~i~v~dl~tg~~~~~~~~~~-k----~~~~~Ws-Dg~~l~y~~~~~~~~- 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA----GSDWREIHLMDVESKQPLETPLKDV-K----FSGISWL-GNEGFFYSSYDKPDG- 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS----SCCEEEEEEEETTTCSEEEEEEEEE-E----SCCCEEE-TTTEEEEEESSCCC--
T ss_pred EEEEEEECCCCCEEEEEEecC----CCceEEEEEEECCCCCCCccccCCc-e----eccEEEe-CCCEEEEEEecCccc-
Confidence 566789999999999987633 4556899999999998766532111 0 3478999 999999985432100
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--eeecCCC-c----cccccccCC
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP-A----VYTSLDPSP 341 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--~~~l~~~-~----~~~~~~~Sp 341 (958)
+ .........+||+.++ ++. .+.+... . ...++.|||
T Consensus 199 --------~---------------------------~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp 243 (693)
T 3iuj_A 199 --------S---------------------------ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE 243 (693)
T ss_dssp -----------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT
T ss_pred --------c---------------------------cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC
Confidence 0 0000002356999998 553 3455443 3 246788999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCc--eEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEe
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAET 419 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~--~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~ 419 (958)
||++|++++.... ..++++++|++++ ..+.|+.... .... .|++||+.++|.++.
T Consensus 244 Dg~~l~~~~~~~~---------~~~~i~~~d~~~~~~~~~~l~~~~~-------------~~~~-~~~~~g~~l~~~t~~ 300 (693)
T 3iuj_A 244 DDRFLLISAANST---------SGNRLYVKDLSQENAPLLTVQGDLD-------------ADVS-LVDNKGSTLYLLTNR 300 (693)
T ss_dssp TSCEEEEEEESSS---------SCCEEEEEETTSTTCCCEEEECSSS-------------SCEE-EEEEETTEEEEEECT
T ss_pred CCCEEEEEEccCC---------CCcEEEEEECCCCCCceEEEeCCCC-------------ceEE-EEeccCCEEEEEECC
Confidence 9999999875432 2348999999855 5566654321 1122 289999999987543
Q ss_pred ccCCCcccccccCCeEEEEeCCCCCCCCc---eEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcE
Q 002164 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPR 496 (958)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 496 (958)
. .....|+++++ +++.. +.++.....+. .|+++|+.|++....++. .+|++++++++ ...
T Consensus 301 ~---------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~-~~l~~~d~~g~--~~~ 363 (693)
T 3iuj_A 301 D---------APNRRLVTVDA---ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT-ARVEQFDYEGK--RVR 363 (693)
T ss_dssp T---------CTTCEEEEEET---TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE-EEEEEECTTSC--EEE
T ss_pred C---------CCCCEEEEEeC---CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe-eEEEEEECCCC--eeE
Confidence 1 23567999996 44443 56655544433 899999999998776653 68999999864 223
Q ss_pred EEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCC
Q 002164 497 ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (958)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~ 571 (958)
.+.-.....+.. +++++|++.|+|..... .....||.+|+++++.+.+....
T Consensus 364 ~l~~p~~~~~~~------~~~~~d~~~l~~~~ss~-----------------~tP~~l~~~d~~~g~~~~l~~~~ 415 (693)
T 3iuj_A 364 EVALPGLGSVSG------FNGKHDDPALYFGFENY-----------------AQPPTLYRFEPKSGAISLYRASA 415 (693)
T ss_dssp EECCSSSSEEEE------CCCCTTCSCEEEEEECS-----------------SSCCEEEEECTTTCCEEEEECCC
T ss_pred EeecCCCceEEe------eecCCCCCEEEEEecCC-----------------CCCCEEEEEECCCCeEEEEEeCC
Confidence 332111111111 55788999988886321 12346999999999888777544
No 124
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.71 E-value=1.2e-15 Score=163.54 Aligned_cols=208 Identities=14% Similarity=0.115 Sum_probs=136.1
Q ss_pred CcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC----C
Q 002164 637 LQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR----G 712 (958)
Q Consensus 637 ~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~----G 712 (958)
.+.+.++|.+.+| .+.+++|+|+++++.+ ++|+||++||++.....+. .........+..|+++ +
T Consensus 39 g~~~~~~~~s~~~-~~~~~vy~P~~~~~~~--~~Pvlv~lHG~~~~~~~~~--------~~~~~~~~~~~~l~~~g~~~~ 107 (297)
T 1gkl_A 39 GRIVKETYTGING-TKSLNVYLPYGYDPNK--KYNIFYLMHGGGENENTIF--------SNDVKLQNILDHAIMNGELEP 107 (297)
T ss_dssp CEEEEEEEEETTE-EEEEEEEECTTCCTTS--CCEEEEEECCTTCCTTSTT--------STTTCHHHHHHHHHHTTSSCC
T ss_pred ceEEEEEEEcCCC-EEEEEEEeCCCCCCCC--CCCEEEEECCCCCCcchhh--------cccchHHHHHHHHHHcCCCCC
Confidence 4567888988775 8999999999986533 5999999999753211100 0000112345567776 4
Q ss_pred cEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCC------------CCCCcEEEEEeChHHHHHHHHHHhC
Q 002164 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGV------------AHPSKIAVGGHSYGAFMTANLLAHA 780 (958)
Q Consensus 713 ~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~------------~d~~~i~l~G~S~GG~~a~~~a~~~ 780 (958)
|+|+.+++++..+ ....+....++|+.. ++.++.. .|+++++|+|+||||++|+.++.++
T Consensus 108 ~ivv~pd~~~~~~-----~~~~~~~~~~~~l~~---~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~ 179 (297)
T 1gkl_A 108 LIVVTPTFNGGNC-----TAQNFYQEFRQNVIP---FVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNC 179 (297)
T ss_dssp EEEEECCSCSTTC-----CTTTHHHHHHHTHHH---HHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHH
T ss_pred EEEEEecCcCCcc-----chHHHHHHHHHHHHH---HHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhC
Confidence 9999977654322 122333334444444 4444422 3677899999999999999999999
Q ss_pred CCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHh
Q 002164 781 PHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKG 860 (958)
Q Consensus 781 p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~ 860 (958)
|++|+++++++|.+.+... ..........+... ..+.....++++.+|++|.. ..+++++.++|+.
T Consensus 180 p~~f~~~v~~sg~~~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~~l~~~~G~~D~~----~~~~~~l~~~L~~ 245 (297)
T 1gkl_A 180 LDYVAYFMPLSGDYWYGNS-------PQDKANSIAEAINR---SGLSKREYFVFAATGSEDIA----YANMNPQIEAMKA 245 (297)
T ss_dssp TTTCCEEEEESCCCCBSSS-------HHHHHHHHHHHHHH---HTCCTTSCEEEEEEETTCTT----HHHHHHHHHHHHT
T ss_pred chhhheeeEeccccccCCc-------cchhhhHHHHHHhh---ccCCcCcEEEEEEeCCCccc----chhHHHHHHHHHH
Confidence 9999999999987532110 00000011111111 11222345677789999975 5678899999999
Q ss_pred CC----------CcEEEEEeCCCCccC
Q 002164 861 HG----------ALCRLVILPFESHGY 877 (958)
Q Consensus 861 ~g----------~~~~~~~~p~~~H~~ 877 (958)
.| +++++.++||++|.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 246 LPHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp STTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred cCCccccccccCCceEEEECCCCCcCH
Confidence 98 699999999999975
No 125
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=8.4e-15 Score=161.60 Aligned_cols=275 Identities=9% Similarity=-0.030 Sum_probs=176.1
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (958)
...++|||||++|++..... ........|+++|+++++.......... ...++|+|||+.++++..
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~--~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~------- 108 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQS--RKLDKGGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNT------- 108 (353)
T ss_dssp EEEEEEETTTTEEEEEECCC--TTTEESEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEET-------
T ss_pred ccceEECCCCCEEEEEcCCC--cCCCCCccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEec-------
Confidence 45689999999997765311 0001256899999999887665543332 458899999998887610
Q ss_pred CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC--c--------cccccc
Q 002164 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP--A--------VYTSLD 338 (958)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~--~--------~~~~~~ 338 (958)
....|+++|+ +|+. ..+..+ . ....+.
T Consensus 109 -----------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (353)
T 3vgz_A 109 -----------------------------------------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELV 147 (353)
T ss_dssp -----------------------------------------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEE
T ss_pred -----------------------------------------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEE
Confidence 1246888888 7754 333221 1 146689
Q ss_pred cCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEE
Q 002164 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (958)
Q Consensus 339 ~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~ 418 (958)
|||||++|++..... .+.|++||+++++......... ..+..+.|+|||+.+++.
T Consensus 148 ~s~dg~~l~~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~s~dg~~l~~~-- 202 (353)
T 3vgz_A 148 ADDATNTVYISGIGK-----------ESVIWVVDGGNIKLKTAIQNTG------------KMSTGLALDSEGKRLYTT-- 202 (353)
T ss_dssp EETTTTEEEEEEESS-----------SCEEEEEETTTTEEEEEECCCC------------TTCCCCEEETTTTEEEEE--
T ss_pred ECCCCCEEEEEecCC-----------CceEEEEcCCCCceEEEecCCC------------CccceEEECCCCCEEEEE--
Confidence 999999988876321 3479999998766543322110 224678999999988774
Q ss_pred eccCCCcccccccCCeEEEEeCCCCCCCCce-EEEee----ccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCC
Q 002164 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-ILHKL----DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV 493 (958)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~-~l~~~----~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~ 493 (958)
...+.++++|. .+++.. .+... ......++|+|||+.|++....+ ..|+++|+.++
T Consensus 203 -----------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---~~v~~~d~~~~-- 263 (353)
T 3vgz_A 203 -----------NADGELITIDT---ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA---AEVLVVDTRNG-- 263 (353)
T ss_dssp -----------CTTSEEEEEET---TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS---SEEEEEETTTC--
T ss_pred -----------cCCCeEEEEEC---CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC---CEEEEEECCCC--
Confidence 33567889985 433332 23221 12234589999999987765332 46899998775
Q ss_pred CcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcc
Q 002164 494 APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKE 573 (958)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~ 573 (958)
+......... . ..+.|+|||++++.... ....|++||+++++..........
T Consensus 264 ~~~~~~~~~~--~------~~~~~s~dg~~l~v~~~--------------------~~~~v~~~d~~~~~~~~~~~~~~~ 315 (353)
T 3vgz_A 264 NILAKVAAPE--S------LAVLFNPARNEAYVTHR--------------------QAGKVSVIDAKSYKVVKTFDTPTH 315 (353)
T ss_dssp CEEEEEECSS--C------CCEEEETTTTEEEEEET--------------------TTTEEEEEETTTTEEEEEEECCSE
T ss_pred cEEEEEEcCC--C------ceEEECCCCCEEEEEEC--------------------CCCeEEEEECCCCeEEEEEecCCC
Confidence 2222222111 1 12789999998776641 113699999998887665544321
Q ss_pred cccceeEeecCCCccccccccCCEEEEEEec
Q 002164 574 KYYETTVALMSDQTEGDLYLNQLKILTSKES 604 (958)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s 604 (958)
+. ..+|++||+.+++....
T Consensus 316 -----~~-------~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 316 -----PN-------SLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----EE-------EEEECTTSCEEEEEEEC
T ss_pred -----CC-------eEEEcCCCCEEEEEEcc
Confidence 12 25789999988887765
No 126
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.71 E-value=1.4e-15 Score=167.20 Aligned_cols=245 Identities=16% Similarity=0.165 Sum_probs=154.3
Q ss_pred CCcEEEEEEEeCC--C--eEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-H
Q 002164 636 SLQKELIKYQRKD--G--VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-A 710 (958)
Q Consensus 636 ~~~~~~~~~~~~d--g--~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~ 710 (958)
......+.|.+.| | ..+.+++++|.+. .++.|+|++.||.... .. ..+..........+..|+ +
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~----~~~~PvV~~~HG~~~~-~~------~~ps~~~~~~~~~~~~lal~ 108 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHP----VGQVGIISYQHGTRFE-RN------DVPSRNNEKNYIYLAAYGNS 108 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSC----SSCEEEEEEECCCCCS-TT------CSGGGCCGGGHHHHHHHTTT
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCC----CCCCcEEEEeCCCcCC-cc------cCCCcCcccchHHHHHHHHh
Confidence 3456677887765 4 5689999999863 2469999999996521 10 111100011123456688 9
Q ss_pred CCcEEEEcCCCCCCCCCCccc-chhh--H---HHHHHHHHHHHHHHHH-cCCCCCCcEEEEEeChHHHHHHHHHHhCC--
Q 002164 711 RGFAILGGPTTPIIGEGDEEA-NDRF--V---EQLVACAEAAVEEVVR-RGVAHPSKIAVGGHSYGAFMTANLLAHAP-- 781 (958)
Q Consensus 711 ~G~~vl~~~~~~~~G~G~~~~-~~~~--~---~~~~~D~~~av~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~a~~~p-- 781 (958)
+||+|+++|++ |+|.+.. ...+ . ...+.|...++..+.+ .+..+.++|+++|||+||+++++++...|
T Consensus 109 ~Gy~Vv~~D~r---G~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~ 185 (377)
T 4ezi_A 109 AGYMTVMPDYL---GLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKE 185 (377)
T ss_dssp TCCEEEEECCT---TSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCC---CCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhh
Confidence 99999995554 5554432 1111 1 2233444444443433 34446789999999999999999988753
Q ss_pred --C-ceeEEEEeccCCCCCC-------CC------C-C------------cc-------cccchhhh-------------
Q 002164 782 --H-LFCCGIARSGAYNRTL-------TP------F-G------------FQ-------NEDRTLWE------------- 812 (958)
Q Consensus 782 --~-~~~a~v~~~~~~~~~~-------~~------~-~------------~~-------~~~~~~~~------------- 812 (958)
+ .+.++++.++++|... .. + + +. .......+
T Consensus 186 ~~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 265 (377)
T 4ezi_A 186 YPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEIL 265 (377)
T ss_dssp CTTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHH
T ss_pred CCCCceEEEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhh
Confidence 3 5889999888766211 00 0 0 00 00000000
Q ss_pred -----cH-----HHHH---h--cCc-cc------c--cCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 002164 813 -----AT-----STYV---E--MSP-FM------S--ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (958)
Q Consensus 813 -----~~-----~~~~---~--~sp-~~------~--~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (958)
.. ..+. . .+| +. . -.++++|+||+||++|.+|| +.++.+++++++..|. ++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp--~~~~~~l~~~l~~~G~-v~~~ 342 (377)
T 4ezi_A 266 QALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVP--YAGAEMAYHSFRKYSD-FVWI 342 (377)
T ss_dssp HHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSC--HHHHHHHHHHHHTTCS-CEEE
T ss_pred hccCCCHHHHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCC--HHHHHHHHHHHHhcCC-EEEE
Confidence 00 0000 0 111 00 0 12467899999999999999 9999999999999999 9999
Q ss_pred EeCC--CCccCCCcccHHHHHHHHHHHHHHhhccC
Q 002164 869 ILPF--ESHGYAARESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 869 ~~p~--~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
.||+ .+|... .......+++||++++..+
T Consensus 343 ~~~~~~~~H~~~----~~~~~~~~~~wl~~~~~~~ 373 (377)
T 4ezi_A 343 KSVSDALDHVQA----HPFVLKEQVDFFKQFERQE 373 (377)
T ss_dssp EESCSSCCTTTT----HHHHHHHHHHHHHHHHTSS
T ss_pred EcCCCCCCccCh----HHHHHHHHHHHHHHhhcch
Confidence 9999 899864 2456788999999998643
No 127
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.71 E-value=9.9e-17 Score=179.72 Aligned_cols=222 Identities=13% Similarity=0.108 Sum_probs=137.9
Q ss_pred CCCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCC----CCCCCCcCcHHHHHHH
Q 002164 634 LASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGS----PNEFPRIGSTSVLLWL 709 (958)
Q Consensus 634 ~~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~----~~~~~~~~~~~~~~la 709 (958)
...+..+.+++++.+|..+++++|+|++. ++++|+||++||+........+ ..+. ...|.......++.|+
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vv~~HG~g~~~~~~~~-~~g~~~~~~~~y~~~~~~~a~~la 161 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNI----NKPVPAILCIPGSGGNKEGLAG-EPGIAPKLNDRYKDPKLTQALNFV 161 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSC----CSCEEEEEEECCTTCCHHHHHT-CCCSSSTTCCSTTCTTTCHHHHHH
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCC----CCCccEEEEEcCCCCCcccccc-cccccccccccccchHHHHHHHHH
Confidence 34456788999999999999999999863 3459999999997432110000 0000 0011100113677899
Q ss_pred HCCcEEEEcCCCCCCCCCCcccc----------------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeC
Q 002164 710 ARGFAILGGPTTPIIGEGDEEAN----------------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHS 767 (958)
Q Consensus 710 ~~G~~vl~~~~~~~~G~G~~~~~----------------------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S 767 (958)
++||+|+++|++ |+|.+... ..+....+.|+.++++||.+++.+|++||+|+|||
T Consensus 162 ~~Gy~Vl~~D~r---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S 238 (398)
T 3nuz_A 162 KEGYIAVAVDNP---AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFS 238 (398)
T ss_dssp TTTCEEEEECCT---TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEG
T ss_pred HCCCEEEEecCC---CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEC
Confidence 999999996655 54444211 12233456899999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCceeEEEEeccCCCCCC-----CC---CC---cccccchhhhcHHHHHhcCcccccCC-CCCCEEE
Q 002164 768 YGAFMTANLLAHAPHLFCCGIARSGAYNRTL-----TP---FG---FQNEDRTLWEATSTYVEMSPFMSANK-LKKPILL 835 (958)
Q Consensus 768 ~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~-----~~---~~---~~~~~~~~~~~~~~~~~~sp~~~~~~-~~~P~Li 835 (958)
|||++|+.+++.. ++++++|+.++++.... .. .+ +....... .+..+...+....+.. ...|+||
T Consensus 239 ~GG~~a~~~aa~~-~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~ap~PlLi 315 (398)
T 3nuz_A 239 LGTEPMMVLGTLD-TSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHL--IPDFWKNFNFPDIVAALAPRPIIL 315 (398)
T ss_dssp GGHHHHHHHHHHC-TTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGC--CTTHHHHCCHHHHHHHTTTSCEEE
T ss_pred HhHHHHHHHHhcC-CcEEEEEEecccccchhhhhhhccccccccccCCccHHHh--cchHhhhCCHHHHHHhhCCCcEEE
Confidence 9999999999887 57888888766543110 00 00 00000000 0000111111111111 1369999
Q ss_pred EeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeC
Q 002164 836 VHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILP 871 (958)
Q Consensus 836 i~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p 871 (958)
+||+.|.. ..+..++++++.. ...+++.+||
T Consensus 316 i~G~~D~~----v~~~~~~y~~~g~-~~~~~~~~~p 346 (398)
T 3nuz_A 316 TEGGLDRD----LDLVRKAYAIVGT-PDNVKIYHYK 346 (398)
T ss_dssp CSCBCHHH----HHHHHHHHHHHTC-TTSEEECCCG
T ss_pred eeCCchHH----HHHHHHHHHHcCC-CcceEEEEeC
Confidence 99999954 4667777776543 3467777777
No 128
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.71 E-value=6.8e-16 Score=166.19 Aligned_cols=229 Identities=11% Similarity=0.044 Sum_probs=143.8
Q ss_pred EEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcC
Q 002164 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (958)
Q Consensus 640 ~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~ 719 (958)
+...++..+|.+++++.+.|.+..+ .+.|+||++||..... ......+..|+++||.|++
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~~~---~~~~~VvllHG~g~~~---------------~~~~~~~~~L~~~G~~Vi~-- 67 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKENVP---FKNNTILIASGFARRM---------------DHFAGLAEYLSTNGFHVFR-- 67 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSC---CCSCEEEEECTTCGGG---------------GGGHHHHHHHHTTTCCEEE--
T ss_pred eEEEEEcCCCCEEEEEEecCcccCC---CCCCEEEEecCCccCc---------------hHHHHHHHHHHHCCCEEEE--
Confidence 4567788899999999988754111 1268899999953211 1112456678889999999
Q ss_pred CCCCCCC-CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC
Q 002164 720 TTPIIGE-GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (958)
Q Consensus 720 ~~~~~G~-G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (958)
+|.+|+ |.+... .........|+.++++++.+.+ .++++|+||||||.+|+.+|.+ | +++++|+.++..+.
T Consensus 68 -~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~ 141 (305)
T 1tht_A 68 -YDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNL 141 (305)
T ss_dssp -ECCCBCC--------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCH
T ss_pred -eeCCCCCCCCCCcccceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhH
Confidence 555676 666432 1124567889999999998543 3689999999999999999988 6 79999988775331
Q ss_pred CCC-----CCCc-------ccc-cchh-h-hcHHHH----Hhc------CcccccCCCCCCEEEEeeCCCCCCCCChHHH
Q 002164 797 TLT-----PFGF-------QNE-DRTL-W-EATSTY----VEM------SPFMSANKLKKPILLVHGEEDNNSGTLTMQS 851 (958)
Q Consensus 797 ~~~-----~~~~-------~~~-~~~~-~-~~~~~~----~~~------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~ 851 (958)
... ...+ ... .... . .....+ ... +....+.++++|+|++||++|..+| +..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp--~~~~ 219 (305)
T 1tht_A 142 RDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVK--QEEV 219 (305)
T ss_dssp HHHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSC--HHHH
T ss_pred HHHHHHHhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccC--HHHH
Confidence 000 0000 000 0000 0 000111 000 1223567899999999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCCc-ccHHHHHHHHHHHHHHhh
Q 002164 852 DRFFNALKGHGALCRLVILPFESHGYAAR-ESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~p~~~H~~~~~-~~~~~~~~~i~~fl~~~l 898 (958)
+++++.+.. ..++++++|++||.+... +....++..+.+|.....
T Consensus 220 ~~l~~~i~~--~~~~l~~i~~agH~~~e~p~~~~~fl~~~~~~~~~~~ 265 (305)
T 1tht_A 220 YDMLAHIRT--GHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIAMD 265 (305)
T ss_dssp HHHHTTCTT--CCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--CCcEEEEeCCCCCchhhCchHHHHHHHHHHHHHHHhC
Confidence 877765532 247999999999997421 112344455555555443
No 129
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.70 E-value=2.7e-16 Score=167.33 Aligned_cols=237 Identities=14% Similarity=0.140 Sum_probs=153.5
Q ss_pred CCcEEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcE
Q 002164 636 SLQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA 714 (958)
Q Consensus 636 ~~~~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~ 714 (958)
..+.+.+++.+. .|.++.++ |+|++ .|+||++||++... +...|... ....+.+++.||+
T Consensus 8 ~~~~~~~~~~S~~~~~~~~~~-~~P~~--------~p~vvllHG~~~~~---------~~~~w~~~-~~~~~~~~~~~~~ 68 (280)
T 1r88_A 8 AAPYENLMVPSPSMGRDIPVA-FLAGG--------PHAVYLLDAFNAGP---------DVSNWVTA-GNAMNTLAGKGIS 68 (280)
T ss_dssp CCCCEEEEEEETTTTEEEEEE-EECCS--------SSEEEEECCSSCCS---------SSCHHHHT-SCHHHHHTTSSSE
T ss_pred CCCEEEEEEECcccCCcceEE-EeCCC--------CCEEEEECCCCCCC---------Chhhhhhc-ccHHHHHhcCCeE
Confidence 345677888875 68889988 88864 27999999963100 00111100 0134556778999
Q ss_pred EEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEecc
Q 002164 715 ILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (958)
Q Consensus 715 vl~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (958)
|+.++..+..++...... ..+.....+|+. .++.++..+|+++++|+|+||||++|+.++.++|++|+++++++|
T Consensus 69 vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg 145 (280)
T 1r88_A 69 VVAPAGGAYSMYTNWEQDGSKQWDTFLSAELP---DWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSG 145 (280)
T ss_dssp EEEECCCTTSTTSBCSSCTTCBHHHHHHTHHH---HHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred EEEECCCCCCccCCCCCCCCCcHHHHHHHHHH---HHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECC
Confidence 999777443333211111 122233334444 444454447888999999999999999999999999999999999
Q ss_pred CCCCCCCCCC------cc----cccchhhhc--HHHHHhcCcccccCCC---CCCEEEEe----eCCCCC-------CCC
Q 002164 793 AYNRTLTPFG------FQ----NEDRTLWEA--TSTYVEMSPFMSANKL---KKPILLVH----GEEDNN-------SGT 846 (958)
Q Consensus 793 ~~~~~~~~~~------~~----~~~~~~~~~--~~~~~~~sp~~~~~~~---~~P~Lii~----G~~D~~-------v~~ 846 (958)
.++....... .. ......|.. ...+...+|+..+.++ +.|+++.| |+.|.. ++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~- 224 (280)
T 1r88_A 146 FLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEA- 224 (280)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHH-
T ss_pred ccCcCCccchhhHHHHhhhccccchhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHH-
Confidence 8764221000 00 000011111 1234556777666555 57999999 999984 46
Q ss_pred ChHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 847 LTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 847 ~~~~~~~~~~~l~~~g-~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
..++++++++|+..| +++++.+|++++|.+. .....+...+.||.+-+.
T Consensus 225 -~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 225 -MGNSRMFYNQYRSVGGHNGHFDFPASGDNGWG---SWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp -HHHHHHHHHHHHHTTCCSEEEECCSSCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHCCCcceEEEecCCCCcChh---HHHHHHHHHHHHHHHHHh
Confidence 889999999999999 9999999988899762 234445666777766654
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.70 E-value=6.8e-15 Score=160.88 Aligned_cols=277 Identities=10% Similarity=-0.017 Sum_probs=166.7
Q ss_pred eceeEEEccCCCCCCce-eeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCce-eeccCCCCc
Q 002164 163 TGIGIHQLFPDGKLGQE-IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLFQSPDI 240 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~-~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~-~~lt~~~~~ 240 (958)
+.|.+|++.+ ++. ..+. .. .... .++|||||++|+++.. +...|+++++++++. .........
T Consensus 20 ~~v~~~d~~~----~~~~~~~~-~~-~~~~-~~~~s~dg~~l~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~ 84 (331)
T 3u4y_A 20 RRISFFSTDT----LEILNQIT-LG-YDFV-DTAITSDCSNVVVTSD--------FCQTLVQIETQLEPPKVVAIQEGQS 84 (331)
T ss_dssp TEEEEEETTT----CCEEEEEE-CC-CCEE-EEEECSSSCEEEEEES--------TTCEEEEEECSSSSCEEEEEEECSS
T ss_pred CeEEEEeCcc----cceeeeEE-cc-CCcc-eEEEcCCCCEEEEEeC--------CCCeEEEEECCCCceeEEecccCCC
Confidence 3789999854 333 2332 22 2345 8999999998887652 245999999998875 333222222
Q ss_pred cccccccc-eEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 241 YLNAIFDN-FVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 241 ~~~~~~~~-~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
... ++|+|||++|+.. ... + ....|+++
T Consensus 85 -----~~~~~~~s~dg~~l~~~-~~~--------------------------------------~-------~~~~i~v~ 113 (331)
T 3u4y_A 85 -----SMADVDITPDDQFAVTV-TGL--------------------------------------N-------HPFNMQSY 113 (331)
T ss_dssp -----CCCCEEECTTSSEEEEC-CCS--------------------------------------S-------SSCEEEEE
T ss_pred -----CccceEECCCCCEEEEe-cCC--------------------------------------C-------CcccEEEE
Confidence 335 8999999999832 100 0 11268899
Q ss_pred Ec-CCeeeecC-CCccccccccCCCCcEEEEEeecCCccccccCCCCCce-eEEEeccCc-eEEEeccCCccccCccccc
Q 002164 320 SL-DGTVKEIG-PPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQ-VGVWTTDGI-FVRELCDLPLAEDIPIAFN 395 (958)
Q Consensus 320 ~~-~g~~~~l~-~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~-i~l~d~~~~-~~~~l~~~~~~~~~p~~~~ 395 (958)
++ +++..... .......++|||||++|++..... .. +.+|+++.. ..........
T Consensus 114 d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~~i~~~~~~~~g~~~~~~~~~~--------- 172 (331)
T 3u4y_A 114 SFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------------ANTVRRFKIDADGVLFDTGQEFI--------- 172 (331)
T ss_dssp ETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------------TTEEEEEEECTTCCEEEEEEEEE---------
T ss_pred ECCCCCeEEEEECCCCccceEECCCCCEEEEEecCC------------CceEEEEEECCCCcEeecCCccc---------
Confidence 98 77554433 334567899999999988776432 25 888988732 2111100000
Q ss_pred ccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCc---eEEEeeccccCceeeecCCceEEE
Q 002164 396 SVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVY 472 (958)
Q Consensus 396 ~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~~~~~~~~~~spDg~~l~~ 472 (958)
.....+..+.|+|||+.+++.. ...+.|+++++ .+++. ............++|+|||++|++
T Consensus 173 ~~~~~~~~~~~spdg~~l~v~~------------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 237 (331)
T 3u4y_A 173 SGGTRPFNITFTPDGNFAFVAN------------LIGNSIGILET---QNPENITLLNAVGTNNLPGTIVVSRDGSTVYV 237 (331)
T ss_dssp CSSSSEEEEEECTTSSEEEEEE------------TTTTEEEEEEC---SSTTSCEEEEEEECSSCCCCEEECTTSSEEEE
T ss_pred cCCCCccceEECCCCCEEEEEe------------CCCCeEEEEEC---CCCcccceeeeccCCCCCceEEECCCCCEEEE
Confidence 0013456899999999877741 23457899996 44443 222233455678999999999877
Q ss_pred EEeccccceEEEEEcCCCCCCCcEEEeccC----CccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCC
Q 002164 473 ESWYKTRRTRTWVISPGSKDVAPRILFDRS----SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPE 548 (958)
Q Consensus 473 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~ 548 (958)
....+ ..|+++++.++........... ....+ ....+.|||||++|++...
T Consensus 238 ~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~v~~~------------------- 292 (331)
T 3u4y_A 238 LTEST---VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLF---GANQMALNKTETKLFISAN------------------- 292 (331)
T ss_dssp ECSSE---EEEEEEETTTTEEEEEEEEECCCCCCCGGGT---TCCCEEECTTSSEEEEEET-------------------
T ss_pred EEcCC---CEEEEEECCCCceeeecccccccccCCCCcc---cccceEECCCCCEEEEecC-------------------
Confidence 65432 4588899887521111111111 11111 1112689999999877652
Q ss_pred CCCCeEEEEECCCCceEEE
Q 002164 549 GNIPFLDLFDINTGSKERI 567 (958)
Q Consensus 549 ~~~~~L~~~dl~~g~~~~l 567 (958)
....|.+||+++.....+
T Consensus 293 -~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 293 -ISRELKVFTISGKVVGYV 310 (331)
T ss_dssp -TTTEEEEEETTSCEEEEC
T ss_pred -CCCcEEEEEecCCcccce
Confidence 123599999987655443
No 131
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.70 E-value=1.5e-15 Score=167.36 Aligned_cols=286 Identities=12% Similarity=0.100 Sum_probs=176.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCce---eee-ccC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE---IEI-QGF 185 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~---~~l-t~~ 185 (958)
.+..++|||||++||..+.+ +.|.||++.. +.. ..+ .+
T Consensus 18 ~v~~l~~sp~g~~las~~~D---------------------------------~~i~iw~~~~----~~~~~~~~~~~~- 59 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD---------------------------------RRIRIWGTEG----DSWICKSVLSEG- 59 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT---------------------------------SCEEEEEEET----TEEEEEEEECSS-
T ss_pred cEEEEEECCCCCEEEEEcCC---------------------------------CeEEEEEcCC----Ccceeeeeeccc-
Confidence 45678999999999998875 4789999854 221 111 22
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeecc--CCCCccccccccceEEecCCeEEEEEec
Q 002164 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLF--QSPDIYLNAIFDNFVWVNNSTLLVCTIP 263 (958)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt--~~~~~~~~~~~~~~~wspDG~~l~~~~~ 263 (958)
+...+...+|||||++|+.... ...+.+|+..++....+. ..... .+..++|+|||+.|+...
T Consensus 60 -h~~~v~~~~~sp~g~~l~s~s~---------D~~v~iw~~~~~~~~~~~~~~~h~~----~v~~v~~sp~~~~l~s~s- 124 (345)
T 3fm0_A 60 -HQRTVRKVAWSPCGNYLASASF---------DATTCIWKKNQDDFECVTTLEGHEN----EVKSVAWAPSGNLLATCS- 124 (345)
T ss_dssp -CSSCEEEEEECTTSSEEEEEET---------TSCEEEEEECCC-EEEEEEECCCSS----CEEEEEECTTSSEEEEEE-
T ss_pred -cCCcEEEEEECCCCCEEEEEEC---------CCcEEEEEccCCCeEEEEEccCCCC----CceEEEEeCCCCEEEEEE-
Confidence 2347889999999999988652 445666776665432221 22222 277899999999998762
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe----eeecCCC-cccccc
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGPP-AVYTSL 337 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~----~~~l~~~-~~~~~~ 337 (958)
....|.++++ ++. ...+... ..+..+
T Consensus 125 ------------------------------------------------~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 125 ------------------------------------------------RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp ------------------------------------------------TTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred ------------------------------------------------CCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 1234556666 432 2233333 667889
Q ss_pred ccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEE
Q 002164 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (958)
Q Consensus 338 ~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~ 417 (958)
+|+|||+.|+..+.+ +.+.+|+...+....+.... +....+..++|+|||+.|+..
T Consensus 157 ~~~p~~~~l~s~s~d-------------~~i~~w~~~~~~~~~~~~~~----------~h~~~v~~l~~sp~g~~l~s~- 212 (345)
T 3fm0_A 157 VWHPSQELLASASYD-------------DTVKLYREEEDDWVCCATLE----------GHESTVWSLAFDPSGQRLASC- 212 (345)
T ss_dssp EECSSSSCEEEEETT-------------SCEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECTTSSEEEEE-
T ss_pred EECCCCCEEEEEeCC-------------CcEEEEEecCCCEEEEEEec----------CCCCceEEEEECCCCCEEEEE-
Confidence 999999999888743 48999998866543222211 112456789999999987763
Q ss_pred EeccCCCcccccccCCeEEEEeCCCCCCCCc------------eEE---Ee-eccccCceeeecCCceEEEEEeccccce
Q 002164 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP------------EIL---HK-LDLRYGGISWCDDSLALVYESWYKTRRT 481 (958)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~------------~~l---~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~ 481 (958)
+..+.|.+|+. ...+.. ..+ .. +...+..++|+|++..|+..+.++. .
T Consensus 213 ------------s~D~~v~iW~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~--i 276 (345)
T 3fm0_A 213 ------------SDDRTVRIWRQ--YLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA--I 276 (345)
T ss_dssp ------------ETTSCEEEEEE--ECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC--E
T ss_pred ------------eCCCeEEEecc--ccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe--E
Confidence 34556777763 111111 111 11 2345667899999999988766544 7
Q ss_pred EEEEEcCCCCCCCcEE-----EeccCCccccCCCCCCceEeccCCc-eEEEEeeeccCCCcEEEEccCCCCCCCCCCeEE
Q 002164 482 RTWVISPGSKDVAPRI-----LFDRSSEDVYSDPGSPMMRRTSTGT-YVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (958)
Q Consensus 482 ~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 555 (958)
++|.++.......+.. ........+.. ++|+|++. .|+....+ ..|.
T Consensus 277 ~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~------v~~~p~~~~~laS~s~D---------------------g~v~ 329 (345)
T 3fm0_A 277 RVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNC------VAWNPKEPGLLASCSDD---------------------GEVA 329 (345)
T ss_dssp EEEEECTTSCTTSCCEEEEEEETTSSSSCEEE------EEECSSSTTEEEEEETT---------------------SCEE
T ss_pred EEEEeCCCCCcceeeEEEEeeecccccCcEeE------eEEeCCCceEEEEcCCC---------------------CcEE
Confidence 7888775442112111 11223333333 78999985 56655421 2488
Q ss_pred EEECCCCc
Q 002164 556 LFDINTGS 563 (958)
Q Consensus 556 ~~dl~~g~ 563 (958)
+|++.+++
T Consensus 330 ~W~~~~~~ 337 (345)
T 3fm0_A 330 FWKYQRPE 337 (345)
T ss_dssp EEEECC--
T ss_pred EEEecCCC
Confidence 89887654
No 132
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.70 E-value=1.3e-14 Score=165.23 Aligned_cols=305 Identities=10% Similarity=0.016 Sum_probs=185.9
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCC-ccccccccceEEecCCeEEEEEecCCCC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~-~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (958)
..+..++|+| ++.++++.. ....|++|++++|+..+...... ......+..++|+|||+.++...
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~--------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~----- 188 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLL--------EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM----- 188 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBT--------TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG-----
T ss_pred CCceEEEEeC-CCeEEEEeC--------CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC-----
Confidence 4566899999 556666542 24469999999988776432211 00011266789999998877551
Q ss_pred CCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccccCCCCc
Q 002164 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEK 344 (958)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDGk 344 (958)
....|+++++ +++. ..+... ..+..++|+|||+
T Consensus 189 --------------------------------------------~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (433)
T 3bws_A 189 --------------------------------------------QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRD 224 (433)
T ss_dssp --------------------------------------------GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTT
T ss_pred --------------------------------------------CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCC
Confidence 2346888888 6643 334333 5677899999999
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
+++++... ++.|.+||+.+++........ ..+..+.|+|||+.+++.......
T Consensus 225 ~l~~~~~~------------~~~i~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~g~~l~~~~~~~~~-- 277 (433)
T 3bws_A 225 LVYCSNWI------------SEDISVIDRKTKLEIRKTDKI-------------GLPRGLLLSKDGKELYIAQFSASN-- 277 (433)
T ss_dssp EEEEEETT------------TTEEEEEETTTTEEEEECCCC-------------SEEEEEEECTTSSEEEEEEEESCT--
T ss_pred EEEEEecC------------CCcEEEEECCCCcEEEEecCC-------------CCceEEEEcCCCCEEEEEECCCCc--
Confidence 99877632 348999999866543322211 234679999999988775322110
Q ss_pred cccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCc
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSE 504 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 504 (958)
. ....+.|++|++ .+++.............++|+|||+.|+++...+ ..|+++++.++ +....... ..
T Consensus 278 --~-~~~dg~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~---~~v~v~d~~~~--~~~~~~~~-~~ 345 (433)
T 3bws_A 278 --Q-ESGGGRLGIYSM---DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC---SKIEVYDLKEK--KVQKSIPV-FD 345 (433)
T ss_dssp --T-CSCCEEEEEEET---TTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT---TEEEEEETTTT--EEEEEEEC-SS
T ss_pred --c-ccCCCeEEEEEC---CCCcEEeeccCCCCcceEEECCCCCEEEEEecCC---CEEEEEECCCC--cEEEEecC-CC
Confidence 0 013557999996 4444444444444667799999999988876544 35777787764 22222221 11
Q ss_pred cccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecC
Q 002164 505 DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMS 584 (958)
Q Consensus 505 ~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~ 584 (958)
.+.. +.|+|||++|+......+......+.. ......|++||+++++.......... +.
T Consensus 346 ~~~~------~~~s~dg~~l~~~~~~~~~~~~~~~~~------g~~dg~v~~~d~~~~~~~~~~~~~~~-----~~---- 404 (433)
T 3bws_A 346 KPNT------IALSPDGKYLYVSCRGPNHPTEGYLKK------GLVLGKVYVIDTTTDTVKEFWEAGNQ-----PT---- 404 (433)
T ss_dssp SEEE------EEECTTSSEEEEEECCCCCTTTCTTSC------CSSCCEEEEEETTTTEEEEEEECSSS-----EE----
T ss_pred CCCe------EEEcCCCCEEEEEecCCCccccccccc------cccceEEEEEECCCCcEEEEecCCCC-----Cc----
Confidence 2222 789999998887763211000000000 01123799999999887766654321 12
Q ss_pred CCccccccccCCEEEEEEecCCCCceEEEEECC
Q 002164 585 DQTEGDLYLNQLKILTSKESKTENTQYYIQSWP 617 (958)
Q Consensus 585 ~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~ 617 (958)
..+|+|||+.+++.... ...++++++.
T Consensus 405 ---~~~~s~dg~~l~~~~~~---d~~i~v~~~~ 431 (433)
T 3bws_A 405 ---GLDVSPDNRYLVISDFL---DHQIRVYRRD 431 (433)
T ss_dssp ---EEEECTTSCEEEEEETT---TTEEEEEEET
T ss_pred ---eEEEcCCCCEEEEEECC---CCeEEEEEec
Confidence 25789999888765532 2456776653
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=8.1e-15 Score=161.73 Aligned_cols=283 Identities=10% Similarity=-0.023 Sum_probs=176.0
Q ss_pred CCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCc
Q 002164 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (958)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~ 190 (958)
...++|||||++|++.... .... ...+.|+++++.+ + ...+.+. .+..
T Consensus 43 ~~~~~~s~dg~~l~~~~~~---------------------~~~~-----~~~~~v~~~d~~~-~--~~~~~~~---~~~~ 90 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQ---------------------SRKL-----DKGGVVYRLDPVT-L--EVTQAIH---NDLK 90 (353)
T ss_dssp EEEEEEETTTTEEEEEECC---------------------CTTT-----EESEEEEEECTTT-C--CEEEEEE---ESSC
T ss_pred ccceEECCCCCEEEEEcCC---------------------CcCC-----CCCccEEEEcCCC-C--eEEEEEe---cCCC
Confidence 4578999999999776642 0000 0014789998754 2 1223332 2235
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc-----cccccceEEecCCeEEEEEecCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL-----NAIFDNFVWVNNSTLLVCTIPLL 265 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~-----~~~~~~~~wspDG~~l~~~~~~~ 265 (958)
...+.|+|||++|+++.. ....|+++|+++++.......+.... ......++|+|||+.|++....
T Consensus 91 ~~~~~~s~dg~~l~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~- 161 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNT--------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG- 161 (353)
T ss_dssp CCSEEEETTTTEEEEEET--------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-
T ss_pred cceEEECCCCCEEEEEec--------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-
Confidence 678999999998887642 24589999999988755443322100 0013468999999988876100
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCC-C-ccccccccCCC
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP-P-AVYTSLDPSPD 342 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~-~-~~~~~~~~SpD 342 (958)
....|+++|+ +++...... . .....++||||
T Consensus 162 ----------------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 162 ----------------------------------------------KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp ----------------------------------------------SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred ----------------------------------------------CCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence 1345999999 776554433 3 44678899999
Q ss_pred CcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccC
Q 002164 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDG 422 (958)
Q Consensus 343 Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~ 422 (958)
|++|++... .+.+++||+.+++.......... +.......+.|+|||+.+++. .
T Consensus 196 g~~l~~~~~-------------~~~i~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~-~---- 249 (353)
T 3vgz_A 196 GKRLYTTNA-------------DGELITIDTADNKILSRKKLLDD--------GKEHFFINISLDTARQRAFIT-D---- 249 (353)
T ss_dssp TTEEEEECT-------------TSEEEEEETTTTEEEEEEECCCS--------SSCCCEEEEEEETTTTEEEEE-E----
T ss_pred CCEEEEEcC-------------CCeEEEEECCCCeEEEEEEcCCC--------CCCcccceEEECCCCCEEEEE-e----
Confidence 999988763 24899999987665433221110 001233568999999988663 1
Q ss_pred CCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccC
Q 002164 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (958)
Q Consensus 423 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 502 (958)
...+.|+++|. .+++......... ...+.|+|||++|+++...+ ..|+++|+.++ +........
T Consensus 250 -------~~~~~v~~~d~---~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~~--~~~~~~~~~ 313 (353)
T 3vgz_A 250 -------SKAAEVLVVDT---RNGNILAKVAAPE-SLAVLFNPARNEAYVTHRQA---GKVSVIDAKSY--KVVKTFDTP 313 (353)
T ss_dssp -------SSSSEEEEEET---TTCCEEEEEECSS-CCCEEEETTTTEEEEEETTT---TEEEEEETTTT--EEEEEEECC
T ss_pred -------CCCCEEEEEEC---CCCcEEEEEEcCC-CceEEECCCCCEEEEEECCC---CeEEEEECCCC--eEEEEEecC
Confidence 23467999995 4444333222222 35689999999887765433 36888888774 222222211
Q ss_pred CccccCCCCCCceEeccCCceEEEEee
Q 002164 503 SEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (958)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~~ 529 (958)
..... +.|+|||++|+....
T Consensus 314 -~~~~~------~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 314 -THPNS------LALSADGKTLYVSVK 333 (353)
T ss_dssp -SEEEE------EEECTTSCEEEEEEE
T ss_pred -CCCCe------EEEcCCCCEEEEEEc
Confidence 11122 789999998877764
No 134
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.69 E-value=7.9e-15 Score=166.24 Aligned_cols=279 Identities=9% Similarity=0.041 Sum_probs=172.8
Q ss_pred CCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCc
Q 002164 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAK 190 (958)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~ 190 (958)
...++|||||++|+....+ +.+++|++.. +..... +.....
T Consensus 59 ~~~~~~s~~g~~l~~~~~d---------------------------------~~v~i~d~~~----~~~~~~--~~~~~~ 99 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLD---------------------------------GHDFLFNTII----RDGSKM--LKRADY 99 (420)
T ss_dssp CTTCEEEEEETTEEEEEET---------------------------------TEEEEEECCS----EETTTT--SCSCCE
T ss_pred ccceeeeecCCeEEEEEcC---------------------------------CcEEEEEecc----cceeeE--EecCCc
Confidence 4578999999999988765 4789999854 221111 212234
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (958)
.....|+|||++|+.... ...|.+|++.+++........... +..++|+|||+.|+...
T Consensus 100 ~~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s-------- 158 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTT---------EGDIKVLDSNFNLQREIDQAHVSE----ITKLKFFPSGEALISSS-------- 158 (420)
T ss_dssp EEEEEECSSSCEEEEEET---------TSCEEEECTTSCEEEEETTSSSSC----EEEEEECTTSSEEEEEE--------
T ss_pred eEEEEEecCCCEEEEEEC---------CCCEEEEeCCCcceeeecccccCc----cEEEEECCCCCEEEEEe--------
Confidence 555679999999998652 567899999988877664333332 77999999999888761
Q ss_pred CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCCC-ccccccccCCCCcEEE
Q 002164 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYIL 347 (958)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~SpDGk~l~ 347 (958)
....|.++++ +++ ...+... ..+..++|+|||+.|+
T Consensus 159 -----------------------------------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 159 -----------------------------------------QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp -----------------------------------------TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred -----------------------------------------CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence 2345788888 664 4445444 7788999999999999
Q ss_pred EEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCc--cc---------ccccccCcceeeeecCCCCceE
Q 002164 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIP--IA---------FNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p--~~---------~~~~~~~~~~~~~spDG~~l~~ 415 (958)
..+.+ +.+.+||+.++... .+.......... .. .......+..+.|+|||+.++.
T Consensus 198 s~~~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 198 SASLD-------------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp EEETT-------------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred EEcCC-------------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 77633 48999999865443 332211110000 00 0001134566889999998876
Q ss_pred EEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe-eccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCC
Q 002164 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA 494 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~ 494 (958)
. ...+.|.+|++ ..+.....+.. ....+..+.|+|+|+.++++...++ .|+++++.++...
T Consensus 265 ~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg---~i~vwd~~~~~~~ 326 (420)
T 3vl1_A 265 G-------------HVSGVITVHNV--FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG---MLAQWDLRSPECP 326 (420)
T ss_dssp E-------------ETTSCEEEEET--TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS---EEEEEETTCTTSC
T ss_pred E-------------cCCCeEEEEEC--CCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC---eEEEEEcCCCcCc
Confidence 3 44567899996 23333333322 3456778999999994444444332 4666677664221
Q ss_pred cEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 495 PRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
...+.......+. ..++++|++|+...
T Consensus 327 ~~~~~~~~~~~v~-------~~~~~~~~~l~s~~ 353 (420)
T 3vl1_A 327 VGEFLINEGTPIN-------NVYFAAGALFVSSG 353 (420)
T ss_dssp SEEEEESTTSCEE-------EEEEETTEEEEEET
T ss_pred hhhhhccCCCCce-------EEEeCCCCEEEEec
Confidence 2223221222222 23567887766554
No 135
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=2.7e-15 Score=165.37 Aligned_cols=275 Identities=12% Similarity=0.066 Sum_probs=169.1
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..|+| ||++|+|+....+........+||++++++++.+++ .. +..++|||||+.|+|......
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~------~~~~~~SpDg~~la~~~~~~~--- 81 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---EN------ATMPRISPDGKKIAFMRANEE--- 81 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---ES------CEEEEECTTSSEEEEEEEETT---
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---cc------CCCeEECCCCCEEEEEEeccC---
Confidence 5677888 999999987543222233467899999999998887 11 558999999999998821100
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYIL 347 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~ 347 (958)
+ ...+||++++ +|+.++++.. . +..+.|||||++|+
T Consensus 82 ----------------------------------~-------~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~ 119 (347)
T 2gop_A 82 ----------------------------------K-------KVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLL 119 (347)
T ss_dssp ----------------------------------T-------TEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEE
T ss_pred ----------------------------------C-------CcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEE
Confidence 0 2457999999 8888877765 5 78899999999999
Q ss_pred EEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc
Q 002164 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (958)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~ 427 (958)
|.+...+ .....+.+ ..+.|..||.....
T Consensus 120 ~~~~~~~-------------------~~~~~~~~--------------------~~~~~~~~g~~~~~------------ 148 (347)
T 2gop_A 120 IVGFKRR-------------------EDEDFIFE--------------------DDVPAWFDDLGFFD------------ 148 (347)
T ss_dssp EEEECCC-------------------C-----------------------------CCCC--------------------
T ss_pred EEEccCC-------------------CcCCcEEE--------------------cccceeecCccccc------------
Confidence 9984311 00000111 11224444433211
Q ss_pred ccccCCeEEEEeCCCCCCCCc-eEEEeeccccCceeeecCCceEEEEEeccc-----c-ceEEEEEcCCCCCCCcEEEec
Q 002164 428 EVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKT-----R-RTRTWVISPGSKDVAPRILFD 500 (958)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~-----~-~~~l~~~~~~~~~~~~~~~~~ 500 (958)
.....||++++ ++++. +.++. . .+..+.||||| |+|....+. . ..+||.++ + ++...++.
T Consensus 149 --~~~~~l~~~d~---~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~--~~~~~l~~ 215 (347)
T 2gop_A 149 --GEKTTFWIFDT---ESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--D--GKEEKMFE 215 (347)
T ss_dssp ---CEEEEEEEET---TTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--T--TEEEEEEE
T ss_pred --CccceEEEEEC---CCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC--C--CceEEecc
Confidence 22456899995 66666 67766 4 77889999999 777665432 1 46899999 3 23444544
Q ss_pred cCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeE
Q 002164 501 RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTV 580 (958)
Q Consensus 501 ~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~ 580 (958)
. ... ..+||||++|+|..... .........|+++| +++.++++..... .+.
T Consensus 216 ~--~~~--------~~~spdg~~l~~~~~~~-------------~~~~~~~~~l~~~d--~~~~~~l~~~~~~----~~~ 266 (347)
T 2gop_A 216 K--VSF--------YAVDSDGERILLYGKPE-------------KKYMSEHNKLYIYD--GKEVMGILDEVDR----GVG 266 (347)
T ss_dssp E--ESE--------EEEEECSSCEEEEECCS-------------SSCCCSSCEEEEEC--SSCEEESSTTCCS----EEE
T ss_pred C--cce--------eeECCCCCEEEEEEccc-------------cCCccccceEEEEC--CCceEeccccCCc----ccC
Confidence 3 111 34599999999887321 00011235799999 6777777654321 111
Q ss_pred eecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEeec
Q 002164 581 ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQITD 626 (958)
Q Consensus 581 ~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~ 626 (958)
. .+.|+ || +++...... ...+| ++ +|+.++++.
T Consensus 267 ~------~~~~s-dg--~~~~~~~~~-~~~l~-~~--~g~~~~~~~ 299 (347)
T 2gop_A 267 Q------AKIKD-GK--VYFTLFEEG-SVNLY-IW--DGEIKPIAK 299 (347)
T ss_dssp E------EEEET-TE--EEEEEEETT-EEEEE-EE--SSSEEEEEC
T ss_pred C------ccEEc-Cc--EEEEEecCC-cEEEE-Ec--CCceEEEec
Confidence 1 14577 77 555443322 35677 77 566666653
No 136
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.69 E-value=8.6e-16 Score=163.09 Aligned_cols=218 Identities=10% Similarity=0.148 Sum_probs=140.9
Q ss_pred EEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCC
Q 002164 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (958)
Q Consensus 644 ~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~ 723 (958)
+...+|..+ .+|.|.+ ++.|+||++|||.+..++. ..+ .......+++.||.|+.++|+..
T Consensus 9 ~~~~~~~~~--~~y~p~~------~~~p~iv~~HGGg~~~g~~--------~~~---~~~~~~~l~~~g~~Vi~vdYrla 69 (274)
T 2qru_A 9 QTLANGATV--TIYPTTT------EPTNYVVYLHGGGMIYGTK--------SDL---PEELKELFTSNGYTVLALDYLLA 69 (274)
T ss_dssp EECTTSCEE--EEECCSS------SSCEEEEEECCSTTTSCCG--------GGC---CHHHHHHHHTTTEEEEEECCCCT
T ss_pred ccccCCeeE--EEEcCCC------CCCcEEEEEeCccccCCCh--------hhc---hHHHHHHHHHCCCEEEEeCCCCC
Confidence 344467555 6787753 2479999999987543321 111 12234557788999999888632
Q ss_pred CCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH---hCCCceeEEEEeccCCCCCCC-
Q 002164 724 IGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA---HAPHLFCCGIARSGAYNRTLT- 799 (958)
Q Consensus 724 ~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~~~~~~~~~- 799 (958)
++..++..++|+.++++|+.++.. ++++|+|+|+|+||.+|+.++. ..+.++++++..+|..+....
T Consensus 70 --------Pe~~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~ 140 (274)
T 2qru_A 70 --------PNTKIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIK 140 (274)
T ss_dssp --------TTSCHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGG
T ss_pred --------CCCCCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccC
Confidence 223567889999999999998743 2689999999999999999987 346788999988876652110
Q ss_pred -------CCC-------c-c--cccchhhhc-H------------HHHHhc--------Cccc--ccCCCCCCEEEEeeC
Q 002164 800 -------PFG-------F-Q--NEDRTLWEA-T------------STYVEM--------SPFM--SANKLKKPILLVHGE 839 (958)
Q Consensus 800 -------~~~-------~-~--~~~~~~~~~-~------------~~~~~~--------sp~~--~~~~~~~P~Lii~G~ 839 (958)
+.. + . ......+.. . ..+... .++. .+.++ +|+||++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~ 219 (274)
T 2qru_A 141 EPRKLLKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASS 219 (274)
T ss_dssp SCCCSCSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEET
T ss_pred CchhhccccccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEec
Confidence 000 0 0 000000000 0 000000 0010 12344 799999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc---ccHHHHHHHHHHHHHH
Q 002164 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR---ESIMHVLWETDRWLQK 896 (958)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~---~~~~~~~~~i~~fl~~ 896 (958)
.|..++ ..+++++.+++. ++++.++++++|++... +...++.+.+.+||.+
T Consensus 220 ~D~~~~--~~~~~~l~~~~~----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 220 SDEEVP--FRYSKKIGRTIP----ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp TCSSSC--THHHHHHHHHST----TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCcC--HHHHHHHHHhCC----CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 999988 788877776654 46999999999998422 2234667788888865
No 137
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.69 E-value=1.5e-16 Score=168.94 Aligned_cols=226 Identities=13% Similarity=0.094 Sum_probs=144.1
Q ss_pred CCcEEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHH-HHCC-
Q 002164 636 SLQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW-LARG- 712 (958)
Q Consensus 636 ~~~~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-a~~G- 712 (958)
....+.+++.+. .|..+..++|+|+++++.+ ++|+|+++||++... ... .+ ......+ ++.|
T Consensus 15 ~~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~Pvl~~lhG~~~~~-----~~~----~~----~~~~~~~~~~~g~ 79 (275)
T 2qm0_A 15 TSNTEQWKMYSKLEGKEYQIHISKPKQPAPDS--GYPVIYVLDGNAFFQ-----TFH----EA----VKIQSVRAEKTGV 79 (275)
T ss_dssp CTTEEEEEEECTTTCCEEEEEEECCSSCCCTT--CEEEEEEESHHHHHH-----HHH----HH----HHHHGGGHHHHCC
T ss_pred cCCceEEEEEecCCCCEEEEEEECCCCCCCCC--CccEEEEecChHHHH-----HHH----HH----HHHHhhcchhcCC
Confidence 345778888876 7899999999999987544 599999999964200 000 00 0011112 3467
Q ss_pred --cEEEEcCCCCCCCC---------CCccc-------------chhh-HHHHHHHH-HHHHHHHHHcCCCCCCcEEEEEe
Q 002164 713 --FAILGGPTTPIIGE---------GDEEA-------------NDRF-VEQLVACA-EAAVEEVVRRGVAHPSKIAVGGH 766 (958)
Q Consensus 713 --~~vl~~~~~~~~G~---------G~~~~-------------~~~~-~~~~~~D~-~~av~~l~~~~~~d~~~i~l~G~ 766 (958)
++|+.+++++...+ +.... .... .....+.+ .+.+.++.++..+|+++++|+||
T Consensus 80 ~~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~ 159 (275)
T 2qm0_A 80 SPAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGH 159 (275)
T ss_dssp CCCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEE
T ss_pred CCeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEe
Confidence 99998766542111 10000 0000 01111112 24456666666688899999999
Q ss_pred ChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCC
Q 002164 767 SYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGT 846 (958)
Q Consensus 767 S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~ 846 (958)
||||++|+.++.++|++|+++++.+|.+.+. . .......+.+.... .......|++++||+.|..++
T Consensus 160 S~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~-----~----~~~~~~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~- 226 (275)
T 2qm0_A 160 XLGGLFALHILFTNLNAFQNYFISSPSIWWN-----N----KSVLEKEENLIIEL---NNAKFETGVFLTVGSLEREHM- 226 (275)
T ss_dssp THHHHHHHHHHHHCGGGCSEEEEESCCTTHH-----H----HGGGGGTTHHHHHH---HTCSSCEEEEEEEETTSCHHH-
T ss_pred cchhHHHHHHHHhCchhhceeEEeCceeeeC-----h----HHHHHHHHHHHhhh---cccCCCceEEEEeCCcccchh-
Confidence 9999999999999999999999999874210 0 00000011111100 023456799999999999877
Q ss_pred ChHHHHHHHHHH---HhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 847 LTMQSDRFFNAL---KGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 847 ~~~~~~~~~~~l---~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
..++++++++| +..|+++++.++|+++|+.. ....+...++||
T Consensus 227 -~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 227 -VVGANELSERLLQVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp -HHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHhcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 89999999999 56788999999999999753 122334455554
No 138
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.69 E-value=2.7e-16 Score=175.83 Aligned_cols=153 Identities=8% Similarity=0.035 Sum_probs=107.1
Q ss_pred CCCcEEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCC---CCCCCCcCcHHHHHHHHC
Q 002164 635 ASLQKELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGS---PNEFPRIGSTSVLLWLAR 711 (958)
Q Consensus 635 ~~~~~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~la~~ 711 (958)
..+..+.+++++.+|..+++++++|++. +++.|+||++||+........+..... ...|......++..|+++
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~ 158 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHL----KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKE 158 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTC----CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTT
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCC----CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHC
Confidence 4456788999999999999999999763 345999999999643211100000000 000110011457789999
Q ss_pred CcEEEEcCCCCCCCCCCcccc--------hh--------------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChH
Q 002164 712 GFAILGGPTTPIIGEGDEEAN--------DR--------------FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYG 769 (958)
Q Consensus 712 G~~vl~~~~~~~~G~G~~~~~--------~~--------------~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~G 769 (958)
||+|+++|+ +|+|.+... .. +....+.|+.++++||.+++.+|++||+|+|+|||
T Consensus 159 G~~Vl~~D~---rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~G 235 (391)
T 3g8y_A 159 GYVAVAVDN---AAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLG 235 (391)
T ss_dssp TCEEEECCC---TTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGG
T ss_pred CCEEEEecC---CCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChh
Confidence 999999555 455544321 11 11233589999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCceeEEEEeccCCC
Q 002164 770 AFMTANLLAHAPHLFCCGIARSGAYN 795 (958)
Q Consensus 770 G~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (958)
|++|+.+++.. ++++++|+.++++.
T Consensus 236 G~~al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 236 TEPMMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHHHHHHHC-TTCCEEEEESCBCC
T ss_pred HHHHHHHHHcC-CceeEEEEccCCCC
Confidence 99999999887 57999998877654
No 139
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.1e-15 Score=172.90 Aligned_cols=307 Identities=9% Similarity=0.102 Sum_probs=179.2
Q ss_pred cCCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCC
Q 002164 107 DAPPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP 186 (958)
Q Consensus 107 ~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~ 186 (958)
..+.+..++|||||+.++++... .+......+.++.|.+|++.... ..+.+....
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~----------------------~g~~~~~~~~d~~v~iw~~~~~~---~~~~~~~~~ 65 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTV----------------------SGTVDANFSTDSSLELWSLLAAD---SEKPIASLQ 65 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCB----------------------SSCCCSSCCCCCCCEEEESSSGG---GCSCSCCCC
T ss_pred hhhhcceEeeCCCCCCEEEEEec----------------------CcccccccCCCCeEEEEEccCCC---CCcEEEEEe
Confidence 34467889999999955444421 01000001112478999985411 111222222
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCC----C-ceeeccCCCCccccccccceEEecC-CeEEEE
Q 002164 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT----G-KARPLFQSPDIYLNAIFDNFVWVNN-STLLVC 260 (958)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~----g-~~~~lt~~~~~~~~~~~~~~~wspD-G~~l~~ 260 (958)
....+..+.|+|||+.|+.... ...|.+|++.+ . ....+...... +..++|+|| ++.|+.
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~---------dg~v~vw~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~l~s 131 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALD---------NGSLELYSTNEANNAINSMARFSNHSSS-----VKTVKFNAKQDNVLAS 131 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEES---------SSCEEEECCSSTTSCCCEEEECCCSSSC-----CCEEEECSSSTTBEEE
T ss_pred cCCceEEEEECCCCCeEEEEcc---------CCeEEEeecccccccccchhhccCCccc-----eEEEEEcCCCCCEEEE
Confidence 3457899999999999988652 45778888876 2 23333332222 778999998 777776
Q ss_pred EecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-------eeec---C
Q 002164 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-------VKEI---G 329 (958)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-------~~~l---~ 329 (958)
.. ....|.++++ +++ ...+ .
T Consensus 132 ~~-------------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2pm9_A 132 GG-------------------------------------------------NNGEIFIWDMNKCTESPSNYTPLTPGQSM 162 (416)
T ss_dssp EC-------------------------------------------------SSSCEEBCBTTTTSSCTTTCCCBCCCCSC
T ss_pred Ec-------------------------------------------------CCCeEEEEECCCCcccccccccccccccc
Confidence 51 1234666666 443 1111 1
Q ss_pred CC-ccccccccCCCC-cEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeee
Q 002164 330 PP-AVYTSLDPSPDE-KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (958)
Q Consensus 330 ~~-~~~~~~~~SpDG-k~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~s 407 (958)
.. ..+..++|+||| +.|+.... ++.|.+||+.++............ .+....+..+.|+
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~-------------dg~v~iwd~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGS-------------SNFASIWDLKAKKEVIHLSYTSPN------SGIKQQLSVVEWH 223 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESS-------------SSCEEEEETTTTEEEEEECCCCCS------SCCCCCEEEEEEC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcC-------------CCCEEEEECCCCCcceEEeccccc------cccCCceEEEEEC
Confidence 22 667889999995 55555442 348999999866543322211100 0001345789999
Q ss_pred cCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC-ceEEE-eeccccCceeeec-CCceEEEEEeccccceEEE
Q 002164 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILH-KLDLRYGGISWCD-DSLALVYESWYKTRRTRTW 484 (958)
Q Consensus 408 pDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~-~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~ 484 (958)
|||..+++.... + +....|++|++ ..+.. ...+. .+...+..+.|+| +++.|+.....+ .|.
T Consensus 224 ~~~~~~l~~~~~-d--------~~~~~i~~~d~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg----~v~ 288 (416)
T 2pm9_A 224 PKNSTRVATATG-S--------DNDPSILIWDL--RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN----TVL 288 (416)
T ss_dssp SSCTTEEEEEEC-C--------SSSCCCCEEET--TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS----EEE
T ss_pred CCCCCEEEEEEC-C--------CCCceEEEEeC--CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC----CEE
Confidence 999766654211 0 01126888886 22222 33344 4566778899999 888887765433 466
Q ss_pred EEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCC-ceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc
Q 002164 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTG-TYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (958)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~ 563 (958)
++++.++ +...........+.. ++|+||| +.|+.... ...|.+||+.+++
T Consensus 289 ~wd~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~~l~s~~~---------------------d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 289 LWNPESA--EQLSQFPARGNWCFK------TKFAPEAPDLFACASF---------------------DNKIEVQTLQNLT 339 (416)
T ss_dssp EECSSSC--CEEEEEECSSSCCCC------EEECTTCTTEEEECCS---------------------SSEEEEEESCCCC
T ss_pred EeeCCCC--ccceeecCCCCceEE------EEECCCCCCEEEEEec---------------------CCcEEEEEccCCC
Confidence 6777664 333334443344443 8899999 56655442 1258888887665
Q ss_pred e
Q 002164 564 K 564 (958)
Q Consensus 564 ~ 564 (958)
.
T Consensus 340 ~ 340 (416)
T 2pm9_A 340 N 340 (416)
T ss_dssp C
T ss_pred C
Confidence 3
No 140
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.69 E-value=2e-15 Score=165.87 Aligned_cols=231 Identities=10% Similarity=0.059 Sum_probs=145.1
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+...+||||+ +|+... ....|.+||+++++...............+..++|+|||++|+...
T Consensus 84 ~v~~~~~s~d~-~l~~~s---------~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs------- 146 (344)
T 4gqb_B 84 GVADLTWVGER-GILVAS---------DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS------- 146 (344)
T ss_dssp CEEEEEEETTT-EEEEEE---------TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-------
T ss_pred CEEEEEEeCCC-eEEEEE---------CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-------
Confidence 57889999996 566543 2557888898887643322110000111277899999999999762
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~SpDGk~l 346 (958)
....|.++++ +|+.. .+..+ ..+..++|+||++.+
T Consensus 147 ------------------------------------------~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 147 ------------------------------------------KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 1234777888 77543 44444 778899999999876
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 425 (958)
+++... ++.|.+||+..++. ..+.... . ...+..+.|+|++..++..
T Consensus 185 l~s~s~------------D~~v~iwd~~~~~~~~~~~~~~-~----------~~~~~~~~~~p~~~~~l~s--------- 232 (344)
T 4gqb_B 185 FLSCSE------------DNRILLWDTRCPKPASQIGCSA-P----------GYLPTSLAWHPQQSEVFVF--------- 232 (344)
T ss_dssp EEEEET------------TSCEEEEETTSSSCEEECC---------------CCCEEEEEECSSCTTEEEE---------
T ss_pred eeeecc------------ccccccccccccceeeeeecce-e----------eccceeeeecCCCCcceEE---------
Confidence 555432 34899999985543 3332211 0 0234578999987776553
Q ss_pred ccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCcc
Q 002164 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSED 505 (958)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 505 (958)
.+..+.|.+||+ ..+.....+..+...+..++|||||..++++...++ .|.++|+.++ + ......+...
T Consensus 233 ---g~~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~---~i~vwd~~~~--~-~~~~~~H~~~ 301 (344)
T 4gqb_B 233 ---GDENGTVSLVDT--KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC---SLAVLDSSLS--E-LFRSQAHRDF 301 (344)
T ss_dssp ---EETTSEEEEEES--CC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTS---CEEEECTTCC--E-EEEECCCSSC
T ss_pred ---eccCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC---eEEEEECCCC--c-EEEEcCCCCC
Confidence 134567899996 345556667777778889999999965444433332 2555576663 2 2333444444
Q ss_pred ccCCCCCCceEeccCCceEEEEe
Q 002164 506 VYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 506 ~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
+.. ++|||||+.|+...
T Consensus 302 V~~------v~~sp~~~~llas~ 318 (344)
T 4gqb_B 302 VRD------ATWSPLNHSLLTTV 318 (344)
T ss_dssp EEE------EEECSSSTTEEEEE
T ss_pred EEE------EEEeCCCCeEEEEE
Confidence 554 88999998776543
No 141
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.68 E-value=6.4e-16 Score=162.59 Aligned_cols=188 Identities=14% Similarity=0.127 Sum_probs=131.5
Q ss_pred EEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch
Q 002164 654 ATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND 733 (958)
Q Consensus 654 ~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~ 733 (958)
+.+|+|.+...+ .++.|+||++||+.... ......+..|+++||.|+.+++++ .+.
T Consensus 34 ~~~~~p~~~~~~-g~~~p~vv~~HG~~~~~---------------~~~~~~~~~l~~~G~~v~~~d~~~---s~~----- 89 (258)
T 2fx5_A 34 CRIYRPRDLGQG-GVRHPVILWGNGTGAGP---------------STYAGLLSHWASHGFVVAAAETSN---AGT----- 89 (258)
T ss_dssp EEEEEESSTTGG-GCCEEEEEEECCTTCCG---------------GGGHHHHHHHHHHTCEEEEECCSC---CTT-----
T ss_pred EEEEeCCCCccc-CCCceEEEEECCCCCCc---------------hhHHHHHHHHHhCCeEEEEecCCC---Ccc-----
Confidence 788899752211 12589999999964211 112345667889999999977652 111
Q ss_pred hhHHHHHHHHHHHHHHHHHc---------CCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcc
Q 002164 734 RFVEQLVACAEAAVEEVVRR---------GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQ 804 (958)
Q Consensus 734 ~~~~~~~~D~~~av~~l~~~---------~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~ 804 (958)
..|+..+++++.+. ..+|.++++++||||||.+++.++ .+++++++++.+|.....
T Consensus 90 ------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~------- 154 (258)
T 2fx5_A 90 ------GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL------- 154 (258)
T ss_dssp ------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST-------
T ss_pred ------HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc-------
Confidence 12344455555542 245778999999999999999887 446899999988753210
Q ss_pred cccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHH-HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccH
Q 002164 805 NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ-SDRFFNALKGHGALCRLVILPFESHGYAARESI 883 (958)
Q Consensus 805 ~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~ 883 (958)
. .....+.++++|+|++||++|..+| +.. +.++++. .+.+++++++++++|.+.. +..
T Consensus 155 -----~----------~~~~~~~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~-~~~ 213 (258)
T 2fx5_A 155 -----G----------HDSASQRRQQGPMFLMSGGGDTIAF--PYLNAQPVYRR---ANVPVFWGERRYVSHFEPV-GSG 213 (258)
T ss_dssp -----T----------CCGGGGGCCSSCEEEEEETTCSSSC--HHHHTHHHHHH---CSSCEEEEEESSCCTTSST-TTC
T ss_pred -----c----------cchhhhccCCCCEEEEEcCCCcccC--chhhHHHHHhc---cCCCeEEEEECCCCCcccc-chH
Confidence 0 0112355678999999999999998 775 7777766 4467999999999999753 333
Q ss_pred HHHHHHHHHHHHHhhccC
Q 002164 884 MHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 884 ~~~~~~i~~fl~~~l~~~ 901 (958)
..+.+.+.+||++++...
T Consensus 214 ~~~~~~i~~fl~~~l~~~ 231 (258)
T 2fx5_A 214 GAYRGPSTAWFRFQLMDD 231 (258)
T ss_dssp GGGHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCc
Confidence 567888999999888643
No 142
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.68 E-value=4.9e-16 Score=152.79 Aligned_cols=172 Identities=12% Similarity=0.050 Sum_probs=123.7
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (958)
.|+||++||.... ...+ ........|+++||.|+. .+.+|+|.+.... ......+++.+++++
T Consensus 4 ~~~vv~~HG~~~~-----------~~~~--~~~~~~~~l~~~g~~v~~---~d~~g~g~s~~~~-~~~~~~~~~~~~~~~ 66 (176)
T 2qjw_A 4 RGHCILAHGFESG-----------PDAL--KVTALAEVAERLGWTHER---PDFTDLDARRDLG-QLGDVRGRLQRLLEI 66 (176)
T ss_dssp SCEEEEECCTTCC-----------TTSH--HHHHHHHHHHHTTCEEEC---CCCHHHHTCGGGC-TTCCHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCC-----------ccHH--HHHHHHHHHHHCCCEEEE---eCCCCCCCCCCCC-CCCCHHHHHHHHHHH
Confidence 6899999996311 1111 112456678889999999 4555666654321 112234455566667
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCC
Q 002164 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKL 829 (958)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~ 829 (958)
+.+.. +.++++++|||+||.+++.++.+.| ++++|+.+|..+.... ....++
T Consensus 67 ~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~------------------------~~~~~~ 118 (176)
T 2qjw_A 67 ARAAT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL------------------------PALDAA 118 (176)
T ss_dssp HHHHH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB------------------------CCCCCC
T ss_pred HHhcC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc------------------------Cccccc
Confidence 76653 3479999999999999999999987 9999999887542110 004567
Q ss_pred CCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 830 KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 830 ~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
++|+|++||++|..+| +..+.++++.+ +++++++ +++|.+ .+...++.+.+.+||++
T Consensus 119 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~-~~~H~~--~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 119 AVPISIVHAWHDELIP--AADVIAWAQAR-----SARLLLV-DDGHRL--GAHVQAASRAFAELLQS 175 (176)
T ss_dssp SSCEEEEEETTCSSSC--HHHHHHHHHHH-----TCEEEEE-SSCTTC--TTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCccC--HHHHHHHHHhC-----CceEEEe-CCCccc--cccHHHHHHHHHHHHHh
Confidence 8999999999999999 89999998887 3588888 889998 35667777788888764
No 143
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.68 E-value=7.8e-16 Score=167.94 Aligned_cols=127 Identities=16% Similarity=0.154 Sum_probs=100.1
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCc
Q 002164 743 AEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSP 822 (958)
Q Consensus 743 ~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 822 (958)
+.+++..+.++ + ++++++|||+||.+++.++.++|++++++|+++|... ..+
T Consensus 186 ~~~~l~~l~~~--~--~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------~~~ 237 (328)
T 1qlw_A 186 TVANLSKLAIK--L--DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------PKP 237 (328)
T ss_dssp HHHHHHHHHHH--H--TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------CCG
T ss_pred HHHHHHHHHHH--h--CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------CCH
Confidence 34444555443 1 2899999999999999999999999999999987531 001
Q ss_pred ccccCCCCCCEEEEeeCCCCCCCCCh-----HHHHHHHHHHHhCCCcEEEEEeCCCC-----ccCCCcccHHHHHHHHHH
Q 002164 823 FMSANKLKKPILLVHGEEDNNSGTLT-----MQSDRFFNALKGHGALCRLVILPFES-----HGYAARESIMHVLWETDR 892 (958)
Q Consensus 823 ~~~~~~~~~P~Lii~G~~D~~v~~~~-----~~~~~~~~~l~~~g~~~~~~~~p~~~-----H~~~~~~~~~~~~~~i~~ 892 (958)
......+++|+|++||++|..+| + +.++++++.++..|.+++++++|++| |.+....+..++.+.+.+
T Consensus 238 ~~~~~~~~~PvLii~G~~D~~~p--~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~ 315 (328)
T 1qlw_A 238 EDVKPLTSIPVLVVFGDHIEEFP--RWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILD 315 (328)
T ss_dssp GGCGGGTTSCEEEEECSSCTTCT--TTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHH
T ss_pred HHHhhccCCCEEEEeccCCcccc--chhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHH
Confidence 11122356899999999999998 7 88999999999999999999999555 988655557888999999
Q ss_pred HHHHhhc
Q 002164 893 WLQKYCV 899 (958)
Q Consensus 893 fl~~~l~ 899 (958)
||++++.
T Consensus 316 fl~~~~~ 322 (328)
T 1qlw_A 316 WIGRNTA 322 (328)
T ss_dssp HHHHTCC
T ss_pred HHHhccc
Confidence 9998864
No 144
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.68 E-value=1.3e-14 Score=162.83 Aligned_cols=240 Identities=11% Similarity=0.063 Sum_probs=163.9
Q ss_pred CCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCce-eeeccCCCCC
Q 002164 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQGFPDGA 189 (958)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~-~~lt~~~~~~ 189 (958)
+..++|||||++|+++... + +.|++|++.+ ++. +.+. .+.
T Consensus 34 ~~~~~~s~dg~~l~~~~~~----------------------d----------~~i~v~d~~~----~~~~~~~~---~~~ 74 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAH----------------------S----------NDVSIIDTAT----NNVIATVP---AGS 74 (391)
T ss_dssp EEEEEECTTSSEEEEEEGG----------------------G----------TEEEEEETTT----TEEEEEEE---CSS
T ss_pred cceEEECCCCCEEEEECCC----------------------C----------CeEEEEECCC----CeEEEEEE---CCC
Confidence 4578999999999776532 1 3789999854 332 2332 223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..++|||||++|+++.. ....|+++|+.+++.......... +..++|+|||+.|+++..
T Consensus 75 ~v~~~~~spdg~~l~~~~~--------~~~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~------ 135 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNM--------ASSTLSVIDTTSNTVAGTVKTGKS-----PLGLALSPDGKKLYVTNN------ 135 (391)
T ss_dssp SEEEEEECTTSSEEEEEET--------TTTEEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEET------
T ss_pred CccceEECCCCCEEEEEEC--------CCCEEEEEECCCCeEEEEEeCCCC-----cceEEECCCCCEEEEEeC------
Confidence 6888999999999988642 246899999999887666544432 668999999998876610
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCC-CccccccccCCCCcEEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP-PAVYTSLDPSPDEKYIL 347 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~-~~~~~~~~~SpDGk~l~ 347 (958)
....|+++++ +++...... +.....++|+|||++|+
T Consensus 136 ------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~ 173 (391)
T 1l0q_A 136 ------------------------------------------GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVY 173 (391)
T ss_dssp ------------------------------------------TTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEE
T ss_pred ------------------------------------------CCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEE
Confidence 2346888998 775544333 35567889999999998
Q ss_pred EEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc
Q 002164 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (958)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~ 427 (958)
++... .+.+++||+.++......... ..+..+.|+|||+.+++....
T Consensus 174 ~~~~~------------~~~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~g~~l~~~~~~-------- 220 (391)
T 1l0q_A 174 VANFD------------SMSISVIDTVTNSVIDTVKVE-------------AAPSGIAVNPEGTKAYVTNVD-------- 220 (391)
T ss_dssp EEETT------------TTEEEEEETTTTEEEEEEECS-------------SEEEEEEECTTSSEEEEEEEC--------
T ss_pred EEeCC------------CCEEEEEECCCCeEEEEEecC-------------CCccceEECCCCCEEEEEecC--------
Confidence 77533 348999999876654433211 234678999999988874210
Q ss_pred ccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 428 EVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
...+.|++|++ .+++.............+.|+|||+.|+++...+ ..|+++++.++
T Consensus 221 --~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~ 276 (391)
T 1l0q_A 221 --KYFNTVSMIDT---GTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX---NTVSVIDTATN 276 (391)
T ss_dssp --SSCCEEEEEET---TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTT
T ss_pred --cCCCcEEEEEC---CCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC---CEEEEEECCCC
Confidence 13567999996 4443333333333456789999999998775444 35777787764
No 145
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.5e-16 Score=179.15 Aligned_cols=309 Identities=9% Similarity=-0.059 Sum_probs=187.3
Q ss_pred CCCCceecCCCCEEEEEecCCC----CCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccC
Q 002164 110 PLPALSFSPQRDKILFLKRRAL----PPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGF 185 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~ 185 (958)
.+..++|||||+.+|..+.+.. .....+.++...+..+.+.|++. ..+|++.. + .....++ +
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~----------~~~~~~~~-~--~~~~~~~-~ 82 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEF----------ENKLDFEL-A--QQNGLLN-S 82 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCC----------CCTTTTSC-C--CSSCSST-T
T ss_pred cEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCC----------cceEEEEe-C--CCceEee-c
Confidence 5789999999999999877611 11123344555566677777651 12222321 1 1111222 2
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCC
Q 002164 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (958)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (958)
.....+...+|||||++||.... ...+.+|+.++ ....+. ....-....+..++|||||+.|+...
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~---------dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs--- 148 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSN---------NGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN--- 148 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEET---------TSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE---
T ss_pred CCCCcEEEEEECCCCCEEEEEeC---------CCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEc---
Confidence 22347999999999999998663 55677778554 222232 12100011267899999999999872
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--------eeec----CCC-
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--------VKEI----GPP- 331 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--------~~~l----~~~- 331 (958)
..++|-++++ ++. ...+ ...
T Consensus 149 ----------------------------------------------~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~ 182 (588)
T 2j04_A 149 ----------------------------------------------EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSK 182 (588)
T ss_dssp ----------------------------------------------TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCC
T ss_pred ----------------------------------------------CCCEEEEEECCCCccccccceeeeeeeccccccc
Confidence 1244666666 553 2333 222
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE----EeccCCccccCcccccccccCcceeeee
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR----ELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~----~l~~~~~~~~~p~~~~~~~~~~~~~~~s 407 (958)
..+..++||||| |+..+. ++.+++|+++++... .+... ....+..++|+
T Consensus 183 ~~V~sVawSPdg--Laass~-------------D~tVrlWd~~~~~~~~~~~tL~~~------------h~~~V~svaFs 235 (588)
T 2j04_A 183 DWVTHIVWYEDV--LVAALS-------------NNSVFSMTVSASSHQPVSRMIQNA------------SRRKITDLKIV 235 (588)
T ss_dssp CCEEEEEEETTE--EEEEET-------------TCCEEEECCCSSSSCCCEEEEECC------------CSSCCCCEEEE
T ss_pred ccEEEEEEcCCc--EEEEeC-------------CCeEEEEECCCCccccceeeeccc------------ccCcEEEEEEE
Confidence 578899999999 555543 348999999876532 23211 11346789999
Q ss_pred cCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE-eeccccCceee--ecCCceEEEEEeccccceEEE
Q 002164 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISW--CDDSLALVYESWYKTRRTRTW 484 (958)
Q Consensus 408 pDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~--spDg~~l~~~~~~~~~~~~l~ 484 (958)
|+.|+.. ..+.|.+|+. .+++...+. .+...+..++| ||||+.|+.+.+.+ .+||
T Consensus 236 --g~~LASa--------------~~~tIkLWd~---~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG---~klw 293 (588)
T 2j04_A 236 --DYKVVLT--------------CPGYVHKIDL---KNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTS---YKVL 293 (588)
T ss_dssp --TTEEEEE--------------CSSEEEEEET---TTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCE---EEEE
T ss_pred --CCEEEEE--------------eCCeEEEEEC---CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCC---CEEE
Confidence 5666652 2468999995 655553443 55666788999 99998877664332 2688
Q ss_pred EEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCce
Q 002164 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSK 564 (958)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~ 564 (958)
.++ . ++++|||..+++.. ..+++|+..++..
T Consensus 294 ~~d--~------------------------~~~spd~~l~a~~d-----------------------~~v~lW~~~g~~l 324 (588)
T 2j04_A 294 LED--E------------------------LHVTADNIIAPYLE-----------------------KKFKKWSTIWNEF 324 (588)
T ss_dssp ESS--S------------------------EEEECCCSSHHHHH-----------------------HHHHHTTTTTTSS
T ss_pred eec--c------------------------EEECCCceEEEEcC-----------------------CEEEEEECCCCce
Confidence 765 0 56899998777642 1467777765543
Q ss_pred EEEecCCcccccceeEeecCCCccccccccCCEEEEEEe
Q 002164 565 ERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKE 603 (958)
Q Consensus 565 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 603 (958)
..+ .+.. .+. ..+|||||+.++....
T Consensus 325 ~~~-~~~~-----~I~-------~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 325 NNY-ETTL-----VIH-------GISLSPDGYSIAIVYD 350 (588)
T ss_dssp SSS-CCEE-----EEE-------EEEECTTSSEEEEEEE
T ss_pred eee-ccce-----EEE-------EEEECCCCCEEEEEEe
Confidence 211 1111 011 3579999987765444
No 146
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.68 E-value=1.7e-15 Score=160.45 Aligned_cols=213 Identities=14% Similarity=0.156 Sum_probs=135.7
Q ss_pred EEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCC
Q 002164 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (958)
Q Consensus 643 ~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~ 722 (958)
++.+.||.+++...+- . .|.||++||.+.... .| ......|+++||.|++ +|
T Consensus 2 ~~~~~~g~~l~y~~~G--------~--g~~vvllHG~~~~~~-----------~w----~~~~~~l~~~g~~vi~---~D 53 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG--------S--GKPVLFSHGWLLDAD-----------MW----EYQMEYLSSRGYRTIA---FD 53 (271)
T ss_dssp EEECTTSCEEEEEEES--------S--SSEEEEECCTTCCGG-----------GG----HHHHHHHHTTTCEEEE---EC
T ss_pred eEEcCCCCEEEEEccC--------C--CCeEEEECCCCCcHH-----------HH----HHHHHHHHhCCceEEE---ec
Confidence 3667799998766652 1 245788999642211 11 1345567889999999 66
Q ss_pred CCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEeccCCCCCC-
Q 002164 723 IIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRTL- 798 (958)
Q Consensus 723 ~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~~~~~- 798 (958)
.+|+|.+..+ ........+|+.+.++.+ +.+++.|+||||||.+++.++++ .|++++++|++++......
T Consensus 54 ~~G~G~S~~~~~~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~ 127 (271)
T 3ia2_A 54 RRGFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127 (271)
T ss_dssp CTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBC
T ss_pred CCCCccCCCCCCCCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccC
Confidence 6688877543 223456677777777665 33689999999999866665554 5889999999876432110
Q ss_pred ---CCCCcccc-----cch---------------hh-----------------h-----c-------HHHHHhcCccccc
Q 002164 799 ---TPFGFQNE-----DRT---------------LW-----------------E-----A-------TSTYVEMSPFMSA 826 (958)
Q Consensus 799 ---~~~~~~~~-----~~~---------------~~-----------------~-----~-------~~~~~~~sp~~~~ 826 (958)
.+...... ... .+ . . ...+...+....+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (271)
T 3ia2_A 128 KPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDM 207 (271)
T ss_dssp BTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHH
T ss_pred CCCCcccccHHHHHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccc
Confidence 00000000 000 00 0 0 0001111222345
Q ss_pred CCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
.++++|+|++||++|..+| ++.+.++++.+.. ..++.++|++||.+. .+....+.+.+.+||.
T Consensus 208 ~~i~~P~Lvi~G~~D~~~p--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 208 AKIDVPTLVIHGDGDQIVP--FETTGKVAAELIK---GAELKVYKDAPHGFA-VTHAQQLNEDLLAFLK 270 (271)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHST---TCEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEEeCCCCcCC--hHHHHHHHHHhCC---CceEEEEcCCCCccc-ccCHHHHHHHHHHHhh
Confidence 7899999999999999998 7775555554422 368999999999874 5667788888888875
No 147
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.68 E-value=1.1e-15 Score=170.76 Aligned_cols=186 Identities=16% Similarity=0.121 Sum_probs=129.3
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCccc----------------
Q 002164 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEA---------------- 731 (958)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~---------------- 731 (958)
+++|+||++||+... ... ....+..|+++||+|+++++++ +|.+..
T Consensus 96 ~~~P~Vv~~HG~~~~-----------~~~----~~~~a~~La~~Gy~V~~~d~~g---~g~s~~~~~~~~~~~~~~~~~~ 157 (383)
T 3d59_A 96 EKYPLVVFSHGLGAF-----------RTL----YSAIGIDLASHGFIVAAVEHRD---RSASATYYFKDQSAAEIGDKSW 157 (383)
T ss_dssp SCEEEEEEECCTTCC-----------TTT----THHHHHHHHHTTCEEEEECCCS---SCSSEEEECSSHHHHHHTCCEE
T ss_pred CCCCEEEEcCCCCCC-----------chH----HHHHHHHHHhCceEEEEeccCC---CCccceeecCCccccccCCcee
Confidence 369999999996421 111 2356778999999999966654 333210
Q ss_pred --------ch------hhHHHHHHHHHHHHHHHHH--------------------cCCCCCCcEEEEEeChHHHHHHHHH
Q 002164 732 --------ND------RFVEQLVACAEAAVEEVVR--------------------RGVAHPSKIAVGGHSYGAFMTANLL 777 (958)
Q Consensus 732 --------~~------~~~~~~~~D~~~av~~l~~--------------------~~~~d~~~i~l~G~S~GG~~a~~~a 777 (958)
.. .......+|+..+++++.+ ...+|.+||+++|||+||.+++.++
T Consensus 158 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 237 (383)
T 3d59_A 158 LYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTL 237 (383)
T ss_dssp EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHH
Confidence 00 1122346899999999976 4567888999999999999999999
Q ss_pred HhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHH
Q 002164 778 AHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA 857 (958)
Q Consensus 778 ~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~ 857 (958)
.+.+ +|+++|+.+|... +. . .....++++|+|++||++|..+ ... +..++
T Consensus 238 ~~~~-~v~a~v~~~~~~~----p~----------~----------~~~~~~i~~P~Lii~g~~D~~~----~~~-~~~~~ 287 (383)
T 3d59_A 238 SEDQ-RFRCGIALDAWMF----PL----------G----------DEVYSRIPQPLFFINSEYFQYP----ANI-IKMKK 287 (383)
T ss_dssp HHCT-TCCEEEEESCCCT----TC----------C----------GGGGGSCCSCEEEEEETTTCCH----HHH-HHHHT
T ss_pred hhCC-CccEEEEeCCccC----CC----------c----------hhhhccCCCCEEEEecccccch----hhH-HHHHH
Confidence 8885 6999999887421 00 0 0122467899999999999753 332 33466
Q ss_pred HHhCCCcEEEEEeCCCCccCCC---------------------cccH-HHHHHHHHHHHHHhhccC
Q 002164 858 LKGHGALCRLVILPFESHGYAA---------------------RESI-MHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 858 l~~~g~~~~~~~~p~~~H~~~~---------------------~~~~-~~~~~~i~~fl~~~l~~~ 901 (958)
+...+.+++++++++++|.+.. .+.. ..+.+.+++||+++|+..
T Consensus 288 l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 288 CYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp TCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 6667789999999999998621 1111 233456999999999754
No 148
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.67 E-value=1.2e-14 Score=159.81 Aligned_cols=263 Identities=10% Similarity=0.074 Sum_probs=172.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..+.|||||++|+..+.+ +.|.+|++.. + .....+.. ...
T Consensus 57 ~v~~~~~s~d~~~l~s~s~D---------------------------------g~v~iWd~~~-~--~~~~~~~~--~~~ 98 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQD---------------------------------GKLIIWDSYT-T--NKVHAIPL--RSS 98 (340)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------TEEEEEETTT-C--CEEEEEEC--SSS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CcEEEEECCC-C--CcceEeec--CCc
Confidence 46688999999999988875 4799999854 2 22333432 234
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCce-----eeccCCCCccccccccceEEecCCeEEEEEecC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-----RPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~-----~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (958)
.+...+|+|||+.|+.... ...+.+|++.+++. +.+..... .+..+.|+++++.+...
T Consensus 99 ~v~~~~~s~~~~~l~s~~~---------d~~v~iw~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~l~s~s--- 161 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGL---------DNICSIYNLKTREGNVRVSRELAGHTG-----YLSCCRFLDDNQIVTSS--- 161 (340)
T ss_dssp CEEEEEECTTSSEEEEEET---------TCEEEEEETTTCSBSCEEEEEEECCSS-----CEEEEEEEETTEEEEEE---
T ss_pred cEEEEEECCCCCEEEEEeC---------CCeEEEEECccCCCcceeEEEecCCCc-----cEEEEEECCCCcEEEEE---
Confidence 6888999999999988552 56788888876531 12222222 26678899999744322
Q ss_pred CCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-ccccccccCC
Q 002164 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSP 341 (958)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~Sp 341 (958)
....|.++++ +++.. .+... ..+..++|+|
T Consensus 162 -----------------------------------------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 162 -----------------------------------------------GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp -----------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred -----------------------------------------------CCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 2345778888 77543 44444 6788999999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEec
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~ 420 (958)
||+.|+..+.+ +.+.+||+..+.. ..+..+. ..+..+.|+|||+.++..
T Consensus 195 ~~~~l~sg~~d-------------~~v~~wd~~~~~~~~~~~~h~-------------~~v~~v~~~p~~~~l~s~---- 244 (340)
T 1got_B 195 DTRLFVSGACD-------------ASAKLWDVREGMCRQTFTGHE-------------SDINAICFFPNGNAFATG---- 244 (340)
T ss_dssp TSSEEEEEETT-------------SCEEEEETTTCSEEEEECCCS-------------SCEEEEEECTTSSEEEEE----
T ss_pred CCCEEEEEeCC-------------CcEEEEECCCCeeEEEEcCCc-------------CCEEEEEEcCCCCEEEEE----
Confidence 99988877633 4899999985543 3333221 345789999999987763
Q ss_pred cCCCcccccccCCeEEEEeCCCCCCCCceEEEeec---cccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002164 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (958)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~---~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 497 (958)
+..+.|.+||+ ..++........ ..+..+.|+|||+.|+.....+ .|.+++...+ +...
T Consensus 245 ---------s~d~~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~----~i~vwd~~~~--~~~~ 306 (340)
T 1got_B 245 ---------SDDATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF----NCNVWDALKA--DRAG 306 (340)
T ss_dssp ---------ETTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC--CEEE
T ss_pred ---------cCCCcEEEEEC---CCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC----eEEEEEcccC--cEee
Confidence 44567899996 333222111111 2456789999999988775443 3555565553 2333
Q ss_pred EeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 498 LFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
........+.. +.|+|||++|+...
T Consensus 307 ~~~~h~~~v~~------~~~s~dg~~l~s~s 331 (340)
T 1got_B 307 VLAGHDNRVSC------LGVTDDGMAVATGS 331 (340)
T ss_dssp EEECCSSCEEE------EEECTTSSCEEEEE
T ss_pred EeecCCCcEEE------EEEcCCCCEEEEEc
Confidence 33444444443 78999999988776
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.67 E-value=7.5e-15 Score=161.84 Aligned_cols=284 Identities=12% Similarity=0.047 Sum_probs=156.3
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcccc
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~ 243 (958)
+|++|.+.... +....++..........++|||||+ |+++... .+...|+++++++|+.+.+...... .
T Consensus 17 ~i~v~~~d~~t--g~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~------~~~~~v~~~~~~~g~~~~~~~~~~~--~ 85 (347)
T 3hfq_A 17 GIYQGTLDTTA--KTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE------DDEGGIAAWQIDGQTAHKLNTVVAP--G 85 (347)
T ss_dssp EEEEEEEETTT--TEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE------TTEEEEEEEEEETTEEEEEEEEEEE--S
T ss_pred CEEEEEEcCCC--CeEEEeeeeeccCCcceEEEccCCe-EEEEEec------CCCceEEEEEecCCcEEEeeeeecC--C
Confidence 56666663321 4443333222233577799999999 6665531 2356899999988876665431110 0
Q ss_pred ccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc--
Q 002164 244 AIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-- 321 (958)
Q Consensus 244 ~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-- 321 (958)
.....++|+|||+.|+++.. ....+.++++
T Consensus 86 ~~p~~~a~spdg~~l~~~~~------------------------------------------------~~~~v~v~~~~~ 117 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANY------------------------------------------------HKGTAEVMKIAA 117 (347)
T ss_dssp CCCSEEEEETTTTEEEEEET------------------------------------------------TTTEEEEEEECT
T ss_pred CCCEEEEECCCCCEEEEEeC------------------------------------------------CCCEEEEEEeCC
Confidence 01557899999999987721 0122334443
Q ss_pred CCeeeecCC---C----------ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc-CceEEEeccCCcc
Q 002164 322 DGTVKEIGP---P----------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLA 387 (958)
Q Consensus 322 ~g~~~~l~~---~----------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~-~~~~~~l~~~~~~ 387 (958)
+|..+.+.. . ..+..++|||||+ +++.... .+.+++|+++ ++....+......
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~ 184 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG------------SDKVYVYNVSDAGQLSEQSVLTME 184 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT------------TTEEEEEEECTTSCEEEEEEEECC
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC------------CCEEEEEEECCCCcEEEeeeEEcC
Confidence 343332211 0 1245689999999 6555422 3489999998 5544433221111
Q ss_pred ccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee---c------ccc
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL---D------LRY 458 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~---~------~~~ 458 (958)
. ..++..++|+|||+.+++.. ...+.+++++++ ..+++.+.+... . ...
T Consensus 185 ~---------g~~p~~~~~spdg~~l~v~~------------~~~~~v~v~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 185 A---------GFGPRHLVFSPDGQYAFLAG------------ELSSQIASLKYD-TQTGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp T---------TCCEEEEEECTTSSEEEEEE------------TTTTEEEEEEEE-TTTTEEEEEEEEESSCTTCCSCCEE
T ss_pred C---------CCCCceEEECCCCCEEEEEe------------CCCCEEEEEEec-CCCCceEEeeeeeecCCCCCCCCcc
Confidence 0 02456789999999877631 223456666641 123443333221 1 124
Q ss_pred CceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCC--ccccCCCCCCceEeccCCceEEEEeeeccCCCc
Q 002164 459 GGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS--EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGT 536 (958)
Q Consensus 459 ~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~ 536 (958)
..++|||||++|+++...++ ...+|.++.++ ....+..... .... .++|||||++|+.....
T Consensus 243 ~~i~~spdG~~l~v~~~~~~-~v~v~~~~~~g---~~~~~~~~~~~~~~~~------~~~~spdg~~l~v~~~~------ 306 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYN-TLAVFAVTADG---HLTLIQQISTEGDFPR------DFDLDPTEAFVVVVNQN------ 306 (347)
T ss_dssp EEEEECTTSCEEEEEEETTT-EEEEEEECGGG---CEEEEEEEECSSSCCC------EEEECTTSSEEEEEETT------
T ss_pred eeEEECCCCCEEEEEeCCCC-EEEEEEECCCC---cEEEeEEEecCCCCcC------eEEECCCCCEEEEEEcC------
Confidence 45899999999877654432 24556555332 2222211111 1111 17899999998877521
Q ss_pred EEEEccCCCCCCCCCCeEEEEECCCCceEEEec
Q 002164 537 YILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 537 ~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~ 569 (958)
.+.-.+|.+|.++|+.+.+..
T Consensus 307 ------------~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 307 ------------TDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp ------------TTEEEEEEECTTTCCEEEEEE
T ss_pred ------------CCcEEEEEEeCCCCeEEeccc
Confidence 011134444777888776643
No 150
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.67 E-value=2.7e-14 Score=185.58 Aligned_cols=278 Identities=12% Similarity=0.059 Sum_probs=178.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++||..+.+ +.|.+|++.+ + .....+.+ +..
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d---------------------------------~~i~vw~~~~-~--~~~~~~~~--h~~ 658 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGAD---------------------------------KTLQVFKAET-G--EKLLDIKA--HED 658 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEETTT-C--CEEEEECC--CSS
T ss_pred cEEEEEECCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--CEEEEecc--CCC
Confidence 45678999999999988765 4789999854 2 23444543 335
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCe--EEEEEecCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNST--LLVCTIPLLRG 267 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~--~l~~~~~~~~~ 267 (958)
.+...+|||||++|+.... ...|.+||+.+++........... +..++|+|+++ .++...
T Consensus 659 ~v~~~~~s~~~~~l~s~~~---------d~~v~vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~sg~----- 720 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSA---------DKKVKIWDSATGKLVHTYDEHSEQ----VNCCHFTNKSNHLLLATGS----- 720 (1249)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSCCEEEEEE-----
T ss_pred CEEEEEEecCCCEEEEEeC---------CCeEEEEECCCCceEEEEcCCCCc----EEEEEEecCCCceEEEEEe-----
Confidence 7899999999999998652 567999999988766544333332 77899999653 444331
Q ss_pred CCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccccCCCCc
Q 002164 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEK 344 (958)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDGk 344 (958)
....|.++++ +++. ..+... ..+..++|+|||+
T Consensus 721 --------------------------------------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 721 --------------------------------------------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp --------------------------------------------TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT
T ss_pred --------------------------------------------CCCeEEEEECCCcchhheecCCCCCEEEEEEecCCC
Confidence 2245778888 6643 344444 7788999999999
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCC
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~ 423 (958)
.|+..+.+ +.+.+||+.++.. ..+...................+..+.|+|||+.++..
T Consensus 757 ~l~s~s~d-------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~------- 816 (1249)
T 3sfz_A 757 LLASCSAD-------------GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA------- 816 (1249)
T ss_dssp EEEEEESS-------------SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE-------
T ss_pred EEEEEECC-------------CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE-------
Confidence 99888743 4899999985543 33322111000000001111245678999999988873
Q ss_pred CcccccccCCeEEEEeCCCCCCCCceEEE-eeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccC
Q 002164 424 DAKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (958)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 502 (958)
..+.+++|+. ..++....+. .....+..+.|+|+|+.++.....+. +.+++..++ .........
T Consensus 817 -------~~~~v~~~d~--~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~----v~vwd~~~~--~~~~~~~~h 881 (1249)
T 3sfz_A 817 -------AKNKVLLFDI--HTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYC----VELWNIDSR--LKVADCRGH 881 (1249)
T ss_dssp -------ETTEEEEEET--TTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSC----EEEEETTTT--EEEEEECCC
T ss_pred -------cCCcEEEEEe--cCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCe----EEEEEcCCC--ceeeecCCC
Confidence 2457889986 2333333332 44566788999999999887754432 444555553 223333333
Q ss_pred CccccCCCCCCceEeccCCceEEEEe
Q 002164 503 SEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
...+.. +.|+|||++++...
T Consensus 882 ~~~v~~------v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 882 LSWVHG------VMFSPDGSSFLTAS 901 (1249)
T ss_dssp SSCEEE------EEECTTSSEEEEEE
T ss_pred ccceEE------EEECCCCCEEEEEe
Confidence 333433 77899998887765
No 151
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.67 E-value=3.5e-15 Score=158.45 Aligned_cols=214 Identities=16% Similarity=0.196 Sum_probs=137.8
Q ss_pred EEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCC
Q 002164 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (958)
Q Consensus 644 ~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~ 723 (958)
+++.+|.+++...+-|++ .|.||++||.+... ..| ...+..|+++||.|++ .|.
T Consensus 3 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~~-----------~~w----~~~~~~l~~~g~~vi~---~D~ 56 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPLSA-----------DDW----DNQMLFFLSHGYRVIA---HDR 56 (275)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEEcCCCC--------CceEEEECCCCCch-----------hhH----HHHHHHHHHCCceEEE---EcC
Confidence 566789888876664421 36789999964211 111 2345678889999999 666
Q ss_pred CCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEeccCCCCCC--
Q 002164 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (958)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~-- 798 (958)
+|+|.+.... .......+|+.++++.+ +.+++.++||||||.+++.+++++ |++++++|++++......
T Consensus 57 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 130 (275)
T 1a88_A 57 RGHGRSDQPSTGHDMDTYAADVAALTEAL------DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKS 130 (275)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCB
T ss_pred CcCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccC
Confidence 7888775431 23556677887777765 235899999999999999877776 899999999886421100
Q ss_pred --CCCCcc----------------------------c-c--c----c----hhhhc-----H-------HHHHhcCcccc
Q 002164 799 --TPFGFQ----------------------------N-E--D----R----TLWEA-----T-------STYVEMSPFMS 825 (958)
Q Consensus 799 --~~~~~~----------------------------~-~--~----~----~~~~~-----~-------~~~~~~sp~~~ 825 (958)
.+.... . . . . ..|.. . ..+...+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (275)
T 1a88_A 131 DTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDD 210 (275)
T ss_dssp TTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccCcccCCHHHHHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccc
Confidence 000000 0 0 0 0 00000 0 00111122234
Q ss_pred cCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 826 ~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
+.++++|+|+++|++|..+| +....+.++.+. ..+++++++++||.+. .++...+.+.+.+||.
T Consensus 211 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 211 LKRIDVPVLVAHGTDDQVVP--YADAAPKSAELL---ANATLKSYEGLPHGML-STHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTEEEEEETTCCTTHH-HHCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCccCC--cHHHHHHHHhhC---CCcEEEEcCCCCccHH-HhCHHHHHHHHHHHhh
Confidence 56789999999999999998 765544443332 2479999999999874 4567788888999985
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=4.7e-14 Score=154.14 Aligned_cols=296 Identities=8% Similarity=-0.021 Sum_probs=175.2
Q ss_pred eeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCC
Q 002164 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (958)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~ 273 (958)
+.|++++++++.+.. ....|+++|+++++.......+... . .++|+|||+.|+++..
T Consensus 3 ~~~~~~~~~~~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~~----~-~~~~s~dg~~l~~~~~---------- 59 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQ--------HLRRISFFSTDTLEILNQITLGYDF----V-DTAITSDCSNVVVTSD---------- 59 (331)
T ss_dssp ----CCCCEEEEEEG--------GGTEEEEEETTTCCEEEEEECCCCE----E-EEEECSSSCEEEEEES----------
T ss_pred eeEcCCCCEEEEEec--------CCCeEEEEeCcccceeeeEEccCCc----c-eEEEcCCCCEEEEEeC----------
Confidence 467788877666542 3568999999999886665544322 4 8899999998887611
Q ss_pred CCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee--eecCCCccccc-cccCCCCcEEEEE
Q 002164 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV--KEIGPPAVYTS-LDPSPDEKYILIS 349 (958)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~--~~l~~~~~~~~-~~~SpDGk~l~~~ 349 (958)
....|+++++ +++. +.+..+..... ++|||||++|+ .
T Consensus 60 --------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~ 100 (331)
T 3u4y_A 60 --------------------------------------FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-T 100 (331)
T ss_dssp --------------------------------------TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-E
T ss_pred --------------------------------------CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-E
Confidence 2346999999 7763 34444444455 89999999999 4
Q ss_pred eecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccccc
Q 002164 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEV 429 (958)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~ 429 (958)
..... ....|++||+++++........ ..+..+.|+|||+.+++.. .
T Consensus 101 ~~~~~---------~~~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~spdg~~l~~~~-~---------- 147 (331)
T 3u4y_A 101 VTGLN---------HPFNMQSYSFLKNKFISTIPIP-------------YDAVGIAISPNGNGLILID-R---------- 147 (331)
T ss_dssp CCCSS---------SSCEEEEEETTTTEEEEEEECC-------------TTEEEEEECTTSSCEEEEE-E----------
T ss_pred ecCCC---------CcccEEEEECCCCCeEEEEECC-------------CCccceEECCCCCEEEEEe-c----------
Confidence 42210 1128999999876654432211 2346899999999877641 1
Q ss_pred ccCCe-EEEEeCCCCCCCCceEE----EeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCc-EEEeccCC
Q 002164 430 TPRDI-IYTQQAEPVQGEGPEIL----HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP-RILFDRSS 503 (958)
Q Consensus 430 ~~~~~-l~~~~~~~~~g~~~~~l----~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~ 503 (958)
..+. +++|+++ ..+..... .........+.|+|||++|++....+ ..|+++++.++.... .......
T Consensus 148 -~~~~~i~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~---~~v~v~d~~~~~~~~~~~~~~~~- 220 (331)
T 3u4y_A 148 -SSANTVRRFKID--ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG---NSIGILETQNPENITLLNAVGTN- 220 (331)
T ss_dssp -TTTTEEEEEEEC--TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT---TEEEEEECSSTTSCEEEEEEECS-
T ss_pred -CCCceEEEEEEC--CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC---CeEEEEECCCCcccceeeeccCC-
Confidence 1234 6777751 22232111 12223346689999999988776443 357778877652200 2222211
Q ss_pred ccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeec
Q 002164 504 EDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALM 583 (958)
Q Consensus 504 ~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~ 583 (958)
.... .+.|+|||++|+..... ...|++||+++++.+.+.......... ....
T Consensus 221 ~~~~------~~~~spdg~~l~v~~~~--------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~ 272 (331)
T 3u4y_A 221 NLPG------TIVVSRDGSTVYVLTES--------------------TVDVFNFNQLSGTLSFVKSFGHGLLID--PRPL 272 (331)
T ss_dssp SCCC------CEEECTTSSEEEEECSS--------------------EEEEEEEETTTTEEEEEEEEECCCCCC--CGGG
T ss_pred CCCc------eEEECCCCCEEEEEEcC--------------------CCEEEEEECCCCceeeecccccccccC--CCCc
Confidence 1111 17899999988766421 125899999998875543211110000 0000
Q ss_pred CCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002164 584 SDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (958)
Q Consensus 584 ~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~ 622 (958)
......+|+|||+.+++.... ...+.++++.+....
T Consensus 273 ~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 273 FGANQMALNKTETKLFISANI---SRELKVFTISGKVVG 308 (331)
T ss_dssp TTCCCEEECTTSSEEEEEETT---TTEEEEEETTSCEEE
T ss_pred ccccceEECCCCCEEEEecCC---CCcEEEEEecCCccc
Confidence 001235899999988776653 346888887665433
No 153
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.66 E-value=7e-15 Score=191.08 Aligned_cols=378 Identities=10% Similarity=0.007 Sum_probs=222.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||+.++..... .+.+|++... .....+. .....
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~----------------------------------~v~~~d~~~~---~~~~~~~-~~~~~ 841 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKN----------------------------------KVLLFDIHTS---GLLAEIH-TGHHS 841 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETT----------------------------------EEEEEETTTC---CEEEEEE-CSSSS
T ss_pred eEEEEEECCCCCEEEEEcCC----------------------------------cEEEEEecCC---CceeEEc-CCCCC
Confidence 45678999999999988763 7889998652 2222222 12334
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+....|||||+.++... ....|.+|++.++............ +..++|+|||+.|+....+.....
T Consensus 842 ~v~~~~~sp~~~~l~~~~---------~dg~v~vwd~~~~~~~~~~~~h~~~----v~~v~~spdg~~l~s~s~dg~v~v 908 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIAL---------SQYCVELWNIDSRLKVADCRGHLSW----VHGVMFSPDGSSFLTASDDQTIRV 908 (1249)
T ss_dssp CCCEEEECSSTTEEEEEC---------SSSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceEEEEEcCCCCEEEEEe---------CCCeEEEEEcCCCceeeecCCCccc----eEEEEECCCCCEEEEEeCCCeEEE
Confidence 788999999999998854 3567899999887765444333322 778999999999887754322110
Q ss_pred ------CCCCCC-----------CCC-----------CceeeecCCcccccc--hhhhhccCchhhhHHHHhhcceEEEE
Q 002164 270 ------PKKPLV-----------PLG-----------PKMQSNEKRDIIQVR--TFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 270 ------~~~~~~-----------~~~-----------~~~~~~~~~~~~~~r--~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
...... +.. ..+............ ........+.+..++.....+.|+++
T Consensus 909 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~ 988 (1249)
T 3sfz_A 909 WETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKII 988 (1249)
T ss_dssp EEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEE
T ss_pred EEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEE
Confidence 000000 000 000000000000000 00000000000001111134567788
Q ss_pred Ec-CCeee-ecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccc
Q 002164 320 SL-DGTVK-EIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNS 396 (958)
Q Consensus 320 ~~-~g~~~-~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~ 396 (958)
++ +++.. .+... ..+..++|||||++|+..+.+ +.+.+|++.++....+..+.
T Consensus 989 d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-------------g~i~vwd~~~~~~~~~~~~~----------- 1044 (1249)
T 3sfz_A 989 ELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-------------SVIQVWNWQTGDYVFLQAHQ----------- 1044 (1249)
T ss_dssp ETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-------------SBEEEEETTTTEEECCBCCS-----------
T ss_pred EcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCceEEEecCC-----------
Confidence 87 66443 33333 678899999999999987633 48999999987665433221
Q ss_pred cccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEec
Q 002164 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWY 476 (958)
Q Consensus 397 ~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~ 476 (958)
..+..+.|+||+..+.. +..+.+++|++ ..+.....+..+...+..++|||||+.|+..+.+
T Consensus 1045 --~~v~~~~~~~~~~l~~~--------------~~dg~v~vwd~--~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d 1106 (1249)
T 3sfz_A 1045 --ETVKDFRLLQDSRLLSW--------------SFDGTVKVWNV--ITGRIERDFTCHQGTVLSCAISSDATKFSSTSAD 1106 (1249)
T ss_dssp --SCEEEEEECSSSEEEEE--------------ESSSEEEEEET--TTTCCCEEEECCSSCCCCEEECSSSSSCEEECCS
T ss_pred --CcEEEEEEcCCCcEEEE--------------ECCCcEEEEEC--CCCceeEEEcccCCcEEEEEECCCCCEEEEEcCC
Confidence 34567899998864333 44567999996 4555566677777788999999999999887654
Q ss_pred cccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEE
Q 002164 477 KTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDL 556 (958)
Q Consensus 477 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 556 (958)
+. +.++++.++ +...........+.. ++|||||++|+....+ ..|++
T Consensus 1107 ~~----v~iwd~~~~--~~~~~l~~h~~~v~~------~~~s~dg~~lat~~~d---------------------g~i~v 1153 (1249)
T 3sfz_A 1107 KT----AKIWSFDLL--SPLHELKGHNGCVRC------SAFSLDGILLATGDDN---------------------GEIRI 1153 (1249)
T ss_dssp SC----CCEECSSSS--SCSBCCCCCSSCEEE------EEECSSSSEEEEEETT---------------------SCCCE
T ss_pred Cc----EEEEECCCc--ceeeeeccCCCcEEE------EEECCCCCEEEEEeCC---------------------CEEEE
Confidence 43 444555553 222222222233333 7899999999887621 14889
Q ss_pred EECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002164 557 FDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (958)
Q Consensus 557 ~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~ 621 (958)
||+.+++.......... ........+.-...+|++||+.++... ..+.++++.+|+.
T Consensus 1154 wd~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~fs~dg~~l~s~~------g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1154 WNVSDGQLLHSCAPISV--EEGTATHGGWVTDVCFSPDSKTLVSAG------GYLKWWNVATGDS 1210 (1249)
T ss_dssp EESSSSCCCCCCCCCC---------CCSCCCEEEECTTSSCEEEES------SSEEEBCSSSCBC
T ss_pred EECCCCceEEEeccccc--cccccccCceEEEEEECCCCCEEEECC------CeEEEEECCCCce
Confidence 99988775443211100 000000111123468999999876542 4689999888764
No 154
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.66 E-value=1.7e-14 Score=163.01 Aligned_cols=279 Identities=15% Similarity=0.147 Sum_probs=180.8
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..+.|||||+.|+..+.+ +.|.+|++.+ + ...+.+.++. .
T Consensus 110 ~V~~~~~~p~~~~l~s~s~D---------------------------------g~i~vwd~~~-~--~~~~~l~~h~--~ 151 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASED---------------------------------ATIKVWDYET-G--DFERTLKGHT--D 151 (410)
T ss_dssp CEEEEEECSSSSEEEEEESS---------------------------------SCEEEEETTT-C--CCCEEECCCS--S
T ss_pred cEEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--cEEEEEeccC--C
Confidence 46678899999999888775 5799999854 2 2345555433 4
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+...+|+|||+.|+.... ...|.+||+.+++..+........ +..++|+|||+.|+...
T Consensus 152 ~V~~v~~~~~~~~l~sgs~---------D~~i~iwd~~~~~~~~~~~~h~~~----V~~v~~~p~~~~l~s~s------- 211 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSA---------DMTIKLWDFQGFECIRTMHGHDHN----VSSVSIMPNGDHIVSAS------- 211 (410)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSCCCEEETTSSCEEECCCCCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCceeEEEcCCCCC----EEEEEEeCCCCEEEEEe-------
Confidence 6889999999998887552 557788898887765544333322 77899999999988661
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCCC-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~SpDGk~l 346 (958)
....|.++++ +|. ...+... ..+..+.|+|||+.|
T Consensus 212 ------------------------------------------~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 212 ------------------------------------------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp ------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ------------------------------------------CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 2245778888 664 3344444 667888999999999
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcccccccccCcceeeeecCCCCceEEEE-------
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE------- 418 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~------- 418 (958)
+..+.+ +.+.+||+.++... .+..+. ..+..+.|+|++........
T Consensus 250 ~s~s~D-------------~~v~vwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 250 ASCSND-------------QTVRVWVVATKECKAELREHR-------------HVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred EEEcCC-------------CeEEEEECCCCceeeEecCCC-------------ceEEEEEEcCcccccchhhhccccccc
Confidence 887743 48999999865433 332221 33467888887532100000
Q ss_pred eccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002164 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (958)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 498 (958)
....+...+..+..+.|.+||+ ..+.....+..+...+..+.|+|+|++|+..+.++ .|.+++..++ +....
T Consensus 304 ~~~~g~~l~sgs~D~~i~iwd~--~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~----~i~vwd~~~~--~~~~~ 375 (410)
T 1vyh_C 304 SGKPGPFLLSGSRDKTIKMWDV--STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK----TLRVWDYKNK--RCMKT 375 (410)
T ss_dssp ----CCEEEEEETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTT----EEEEECCTTS--CCCEE
T ss_pred cCCCCCEEEEEeCCCeEEEEEC--CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC--ceEEE
Confidence 0000000111244567999996 33434445555666778899999999998765433 3555566553 23333
Q ss_pred eccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
.......+.. +.|+|+|.+|+...
T Consensus 376 ~~~h~~~v~~------l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 376 LNAHEHFVTS------LDFHKTAPYVVTGS 399 (410)
T ss_dssp EECCSSCEEE------EEECSSSSCEEEEE
T ss_pred EcCCCCcEEE------EEEcCCCCEEEEEe
Confidence 3444444444 88999999988776
No 155
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.66 E-value=1.4e-14 Score=160.16 Aligned_cols=289 Identities=10% Similarity=0.069 Sum_probs=167.6
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
..+..++|||||++||..+... .+--...|++++..++................+..++|+||+++|+..
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~---~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s------- 112 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLS---SRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS------- 112 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSS---SSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-------
T ss_pred CCEEEEEECCCCCEEEEEcCCC---CccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-------
Confidence 4688999999999998865311 111145788998777654321111100111226789999999877644
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeee-----cCCC-ccccccccCC
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-----IGPP-AVYTSLDPSP 341 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~-----l~~~-~~~~~~~~Sp 341 (958)
....|.++++ +++... .... ..+..++|||
T Consensus 113 -------------------------------------------~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 113 -------------------------------------------DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp -------------------------------------------TTSCEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred -------------------------------------------CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 1223555566 553221 1122 5678899999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcccccccccCcceeeeecCCCCceEEEEec
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~ 420 (958)
||++|+..+.+ +.|.+||+.++... .+..+ ...+..++|+|+++.+++..
T Consensus 150 dg~~l~sgs~d-------------g~v~iwd~~~~~~~~~~~~h-------------~~~v~~v~~s~~~~~~~~s~--- 200 (357)
T 4g56_B 150 DGTQAVSGGKD-------------FSVKVWDLSQKAVLKSYNAH-------------SSEVNCVAACPGKDTIFLSC--- 200 (357)
T ss_dssp SSSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTCSSCEEEE---
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCC-------------CCCEEEEEEccCCCceeeee---
Confidence 99999887633 48999999866543 33221 13457889999998766531
Q ss_pred cCCCcccccccCCeEEEEeCCCCCCCCceEEE--eeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002164 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (958)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 498 (958)
+..+.|.+||+ ..+.....+. .....+..++|+|++..++.....++ .|.++++..+ +....
T Consensus 201 ---------~~dg~v~~wd~--~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~---~i~~wd~~~~--~~~~~ 264 (357)
T 4g56_B 201 ---------GEDGRILLWDT--RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG---NVSLVNIKNP--DSAQT 264 (357)
T ss_dssp ---------ETTSCEEECCT--TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS---CEEEEESSCG--GGCEE
T ss_pred ---------ccCCceEEEEC--CCCceeeeeeeccccccccchhhhhcccceEEEeeccc---ceeEEECCCC--cEeEE
Confidence 34557889986 2333222222 23344667899999766555444333 2555566653 33344
Q ss_pred eccCCccccCCCCCCceEeccCCce-EEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccc
Q 002164 499 FDRSSEDVYSDPGSPMMRRTSTGTY-VIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYE 577 (958)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~ 577 (958)
.......+.. ++|+|||+. |+....+ ..|++||+++++..+.......
T Consensus 265 ~~~~~~~v~~------l~~sp~~~~~lasgs~D---------------------~~i~iwd~~~~~~~~~~~H~~~---- 313 (357)
T 4g56_B 265 SAVHSQNITG------LAYSYHSSPFLASISED---------------------CTVAVLDADFSEVFRDLSHRDF---- 313 (357)
T ss_dssp ECCCSSCEEE------EEECSSSSCCEEEEETT---------------------SCEEEECTTSCEEEEECCCSSC----
T ss_pred EeccceeEEE------EEEcCCCCCEEEEEeCC---------------------CEEEEEECCCCcEeEECCCCCC----
Confidence 4444444444 789999864 5544411 2499999999887665533321
Q ss_pred eeEeecCCCccccccc-cCCEEEEEEecCCCCceEEEEECCC
Q 002164 578 TTVALMSDQTEGDLYL-NQLKILTSKESKTENTQYYIQSWPD 618 (958)
Q Consensus 578 ~~~~~~~~~~~~~~s~-dg~~l~~~~~s~~~p~~~~~~d~~~ 618 (958)
+. ..+|+| |++.|+ +... ...+++++++.
T Consensus 314 -V~-------~vafsP~d~~~l~-s~s~---Dg~v~iW~~~~ 343 (357)
T 4g56_B 314 -VT-------GVAWSPLDHSKFT-TVGW---DHKVLHHHLPS 343 (357)
T ss_dssp -EE-------EEEECSSSTTEEE-EEET---TSCEEEEECC-
T ss_pred -EE-------EEEEeCCCCCEEE-EEcC---CCeEEEEECCC
Confidence 22 257898 666554 3332 24588888755
No 156
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.66 E-value=2.6e-14 Score=176.93 Aligned_cols=263 Identities=11% Similarity=0.081 Sum_probs=176.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++||+...+ +.|.+|++.+ + .....+.. +..
T Consensus 15 ~v~~i~~sp~~~~la~~~~~---------------------------------g~v~iwd~~~-~--~~~~~~~~--~~~ 56 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYS---------------------------------GRVEIWNYET-Q--VEVRSIQV--TET 56 (814)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CSS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CEEEEEECCC-C--ceEEEEec--CCC
Confidence 46789999999999998765 4789999854 2 23445543 335
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..+.|||||++|++... ...|.+|+..+++........... +..++|+|||+.|++..
T Consensus 57 ~v~~~~~s~~~~~l~~~~~---------dg~i~vw~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~------- 116 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSD---------DFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGS------- 116 (814)
T ss_dssp CEEEEEEEGGGTEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEeCCCCEEEEEeC---------CCeEEEEECCCCcEEEEEecCCCC----EEEEEEeCCCCEEEEEc-------
Confidence 7899999999999999652 568999999888765443323222 77899999999988761
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC-ee-eecCCC-ccccccccCC-CCc
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TV-KEIGPP-AVYTSLDPSP-DEK 344 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g-~~-~~l~~~-~~~~~~~~Sp-DGk 344 (958)
....|.++++ ++ .. ..+... ..+..++|+| ||+
T Consensus 117 ------------------------------------------~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 117 ------------------------------------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp ------------------------------------------TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE
T ss_pred ------------------------------------------CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC
Confidence 1245677777 44 33 334333 6688999999 888
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeec--CCCCceEEEEecc
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS--DKPSTLYWAETQD 421 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp--DG~~l~~~~~~~~ 421 (958)
.|+..+.+ +.|.+||+.++.. ..+.... ...+..+.|+| ||+.++..
T Consensus 155 ~l~~~~~d-------------g~v~vwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~l~~~----- 204 (814)
T 3mkq_A 155 TFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQ------------ERGVNYVDYYPLPDKPYMITA----- 204 (814)
T ss_dssp EEEEEETT-------------SEEEEEETTCSSCSEEEECCC------------TTCCCEEEECCSTTCCEEEEE-----
T ss_pred EEEEEeCC-------------CeEEEEECCCCcceeEEecCC------------CCCEEEEEEEECCCCCEEEEE-----
Confidence 88877633 4899999975432 2222111 13456789999 88877763
Q ss_pred CCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecc
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 501 (958)
+..+.|.+|+. ..+.....+..+...+..+.|+|+|+.|+.....+ .|.++++.++ +.......
T Consensus 205 --------~~dg~i~~~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~v~vwd~~~~--~~~~~~~~ 268 (814)
T 3mkq_A 205 --------SDDLTIKIWDY--QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG----TLKIWNSSTY--KVEKTLNV 268 (814)
T ss_dssp --------CTTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS----CEEEEETTTC--SEEEEECC
T ss_pred --------eCCCEEEEEEC--CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC--cEEEEeec
Confidence 44567999996 23333444455566778899999999888765433 2555566653 33333333
Q ss_pred CCccccCCCCCCceEeccCCceE
Q 002164 502 SSEDVYSDPGSPMMRRTSTGTYV 524 (958)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~l 524 (958)
....+.. ++|+|+|+.+
T Consensus 269 ~~~~v~~------~~~~~~~~~~ 285 (814)
T 3mkq_A 269 GLERSWC------IATHPTGRKN 285 (814)
T ss_dssp SSSSEEE------EEECTTCGGG
T ss_pred CCCcEEE------EEEccCCCce
Confidence 3333333 7899999753
No 157
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.66 E-value=2.6e-15 Score=159.60 Aligned_cols=214 Identities=15% Similarity=0.213 Sum_probs=138.0
Q ss_pred EEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCC
Q 002164 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (958)
Q Consensus 644 ~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~ 723 (958)
+...+|.+++...+-|++ .|.||++||.+... ..| ...+..|+++||.|++ .|.
T Consensus 4 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~~-----------~~w----~~~~~~L~~~g~~vi~---~D~ 57 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD--------APVIHFHHGWPLSA-----------DDW----DAQLLFFLAHGYRVVA---HDR 57 (276)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EECCCCcEEEEEecCCCC--------CCeEEEECCCCcch-----------hHH----HHHHHHHHhCCCEEEE---ecC
Confidence 566789888877664421 36799999964221 111 2345678889999999 666
Q ss_pred CCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEeccCCCCCC--
Q 002164 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (958)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~-- 798 (958)
+|+|.+.... .......+|+.++++.+ +.+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 58 ~G~G~S~~~~~~~~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 131 (276)
T 1zoi_A 58 RGHGRSSQVWDGHDMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQT 131 (276)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCcccccc
Confidence 7888875432 23456677888877765 235899999999999999988876 899999999886421100
Q ss_pred --CCCCcc----------------------------ccc-----------chhhhc-----HH-------HHHhcCcccc
Q 002164 799 --TPFGFQ----------------------------NED-----------RTLWEA-----TS-------TYVEMSPFMS 825 (958)
Q Consensus 799 --~~~~~~----------------------------~~~-----------~~~~~~-----~~-------~~~~~sp~~~ 825 (958)
.+.... ... ...|.. .. .+...+....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (276)
T 1zoi_A 132 PGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTED 211 (276)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHH
T ss_pred ccccccccHHHHHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhh
Confidence 000000 000 000000 00 0011122234
Q ss_pred cCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 826 ~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
+.++++|+|+++|++|..+| +....+.++.+. ...+++++|++||... .++...+.+.+.+||.
T Consensus 212 l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 212 LKGIQQPVLVMHGDDDQIVP--YENSGVLSAKLL---PNGALKTYKGYPHGMP-TTHADVINADLLAFIR 275 (276)
T ss_dssp HHHCCSCEEEEEETTCSSSC--STTTHHHHHHHS---TTEEEEEETTCCTTHH-HHTHHHHHHHHHHHHT
T ss_pred ccccCCCEEEEEcCCCcccC--hHHHHHHHHhhC---CCceEEEcCCCCCchh-hhCHHHHHHHHHHHhc
Confidence 56789999999999999998 764444443332 2479999999999874 4567788888888874
No 158
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.66 E-value=3.4e-14 Score=156.28 Aligned_cols=270 Identities=10% Similarity=0.062 Sum_probs=167.1
Q ss_pred CCCCcee-----cC-CCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCC---C-ce
Q 002164 110 PLPALSF-----SP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL---G-QE 179 (958)
Q Consensus 110 ~~~~~~~-----SP-DG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~---~-~~ 179 (958)
.+..+.| +| ||+.|+..+.+ +.|.+|++...... + ..
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D---------------------------------~~v~iWd~~~~~~~~~~~~~~ 69 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRD---------------------------------KTVMIWKLYEEEQNGYFGIPH 69 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETT---------------------------------SCEEEEEECSSCCSSBSEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCC---------------------------------CEEEEEECCcCCccccccccc
Confidence 3456666 66 99999988875 47899998542110 1 12
Q ss_pred eeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEE
Q 002164 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (958)
Q Consensus 180 ~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~ 259 (958)
..+.++ ...+...+|+|||+.|+... ....|.+||+.+++........... +..++|+|||+.|+
T Consensus 70 ~~l~~h--~~~V~~~~~~~~~~~l~s~s---------~D~~v~lwd~~~~~~~~~~~~h~~~----v~~v~~sp~~~~l~ 134 (343)
T 2xzm_R 70 KALTGH--NHFVSDLALSQENCFAISSS---------WDKTLRLWDLRTGTTYKRFVGHQSE----VYSVAFSPDNRQIL 134 (343)
T ss_dssp EEECCC--SSCEEEEEECSSTTEEEEEE---------TTSEEEEEETTSSCEEEEEECCCSC----EEEEEECSSTTEEE
T ss_pred chhccC--CCceEEEEECCCCCEEEEEc---------CCCcEEEEECCCCcEEEEEcCCCCc----EEEEEECCCCCEEE
Confidence 334443 34688999999999888754 2568999999888765433322222 77899999999988
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecC---CC-ccc
Q 002164 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG---PP-AVY 334 (958)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~---~~-~~~ 334 (958)
... ....|.++++ ......+. .. ..+
T Consensus 135 s~~-------------------------------------------------~d~~i~~wd~~~~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 135 SAG-------------------------------------------------AEREIKLWNILGECKFSSAEKENHSDWV 165 (343)
T ss_dssp EEE-------------------------------------------------TTSCEEEEESSSCEEEECCTTTSCSSCE
T ss_pred EEc-------------------------------------------------CCCEEEEEeccCCceeeeecccCCCcee
Confidence 762 1234666676 33322222 12 556
Q ss_pred cccccCCCC----------cEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCccee
Q 002164 335 TSLDPSPDE----------KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSI 404 (958)
Q Consensus 335 ~~~~~SpDG----------k~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~ 404 (958)
..+.|+|++ ++|+..+. ++.|.+||..+.....+..+. ..+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~-------------d~~i~iwd~~~~~~~~~~~h~-------------~~v~~~ 219 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGW-------------DGRLKVWNTNFQIRYTFKAHE-------------SNVNHL 219 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEET-------------TSEEEEEETTTEEEEEEECCS-------------SCEEEE
T ss_pred eeeeeccccccccccCCCCCEEEEEcC-------------CCEEEEEcCCCceeEEEcCcc-------------ccceEE
Confidence 788899987 56665552 358999996654444333221 345789
Q ss_pred eeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEE
Q 002164 405 NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTW 484 (958)
Q Consensus 405 ~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~ 484 (958)
+|+|||+.|+.. +..+.|.+|++ ...............+..++|+|+++.|+... .++ .++|
T Consensus 220 ~~s~~g~~l~sg-------------s~dg~v~iwd~--~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~--v~iw 281 (343)
T 2xzm_R 220 SISPNGKYIATG-------------GKDKKLLIWDI--LNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQG--VKIF 281 (343)
T ss_dssp EECTTSSEEEEE-------------ETTCEEEEEES--SCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSC--EEEE
T ss_pred EECCCCCEEEEE-------------cCCCeEEEEEC--CCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCC--EEEE
Confidence 999999987763 45667999995 23333333333445578899999998776543 222 4555
Q ss_pred EEcCCCCCCCcEEEecc-----------CCccccCCCCCCceEeccCCceEEEEe
Q 002164 485 VISPGSKDVAPRILFDR-----------SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 485 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
.+ .++.......... ....+. .++|+|||++|+...
T Consensus 282 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 282 NL--MTQSKAPVCTIEAEPITKAEGQKGKNPQCT------SLAWNALGKKLFAGF 328 (343)
T ss_dssp ES--SSCCSCSEEECCCCSGGGBTTBCCSCCCEE------EEEECSSSCCEEEEE
T ss_pred Ee--CCCCCCceEEeecCcchhhhhhcCCCCceE------EEEECCCCCeEEEec
Confidence 44 3321222111110 111111 278999999998776
No 159
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.66 E-value=6.5e-16 Score=174.00 Aligned_cols=234 Identities=13% Similarity=0.105 Sum_probs=154.0
Q ss_pred EEeCCCeEEEEEEEecCCC-CCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH----HCCc---EE
Q 002164 644 YQRKDGVQLSATLYLPPGY-DPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL----ARGF---AI 715 (958)
Q Consensus 644 ~~~~dg~~l~~~l~~P~~~-~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la----~~G~---~v 715 (958)
+...||.++++..+.|.+- .....++.|+||++||.+..... |. ..+..|+ ..|| .|
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~-----------~~----~~~~~L~~~~~~~G~~~~~v 89 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVV-----------WE----YYLPRLVAADAEGNYAIDKV 89 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGG-----------GG----GGGGGSCCCBTTTTEEEEEE
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHH-----------HH----HHHHHHHHhhhhcCcceeEE
Confidence 4567999999999988641 01112346899999996532211 11 1233555 3489 99
Q ss_pred EEcCCCCCCCCCCcccc-------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 002164 716 LGGPTTPIIGEGDEEAN-------DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGI 788 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~-------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v 788 (958)
++ .|.+|+|.+... .........|+.++++.+...-.+++.+++|+||||||.+++.++.++|++++++|
T Consensus 90 i~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 166 (398)
T 2y6u_A 90 LL---IDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLI 166 (398)
T ss_dssp EE---ECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEE
T ss_pred EE---EcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEE
Confidence 99 566688877542 12345667777777766532212444569999999999999999999999999999
Q ss_pred EeccCCCCCC--------CCCC---ccc--------ccc----------------hhhh--cH---HHHHh---------
Q 002164 789 ARSGAYNRTL--------TPFG---FQN--------EDR----------------TLWE--AT---STYVE--------- 819 (958)
Q Consensus 789 ~~~~~~~~~~--------~~~~---~~~--------~~~----------------~~~~--~~---~~~~~--------- 819 (958)
+++|...... .... ... ... ..+. .+ +.+..
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
T 2y6u_A 167 LIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGD 246 (398)
T ss_dssp EESCCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC----
T ss_pred EeccccccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCcccccc
Confidence 9998755311 0000 000 000 0000 00 00100
Q ss_pred ---------------------------cCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC
Q 002164 820 ---------------------------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF 872 (958)
Q Consensus 820 ---------------------------~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~ 872 (958)
.+....+.++++|+|+++|++|..+| +..+.++++.+. .++++++|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~--~~~~~~l~~~~~----~~~~~~~~~ 320 (398)
T 2y6u_A 247 DEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCP--PQNQLFLQKTLQ----NYHLDVIPG 320 (398)
T ss_dssp ----CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSC--HHHHHHHHHHCS----SEEEEEETT
T ss_pred ccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCC--HHHHHHHHHhCC----CceEEEeCC
Confidence 01123456789999999999999998 888888877664 479999999
Q ss_pred CCccCCCcccHHHHHHHHHHHHHHhhccCC
Q 002164 873 ESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 873 ~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
+||.+. .+....+.+.+.+||.+++....
T Consensus 321 ~gH~~~-~e~p~~~~~~i~~fl~~~~~~~~ 349 (398)
T 2y6u_A 321 GSHLVN-VEAPDLVIERINHHIHEFVLTSP 349 (398)
T ss_dssp CCTTHH-HHSHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccch-hcCHHHHHHHHHHHHHHHHHhHH
Confidence 999864 45677889999999999986543
No 160
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.66 E-value=7e-15 Score=167.86 Aligned_cols=222 Identities=12% Similarity=0.053 Sum_probs=147.3
Q ss_pred EEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEc
Q 002164 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (958)
Q Consensus 639 ~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~ 718 (958)
...+.+.+.+|..++.... + ..|+||++||++.... .| ...+..|+++||.|++
T Consensus 3 ~i~~~~~~~dG~~l~y~~~---G-------~gp~VV~lHG~~~~~~-----------~~----~~l~~~La~~Gy~Vi~- 56 (456)
T 3vdx_A 3 FITVGQENSTSIDLYYEDH---G-------TGVPVVLIHGFPLSGH-----------SW----ERQSAALLDAGYRVIT- 56 (456)
T ss_dssp EEEEEEETTEEEEEEEEEE---S-------SSEEEEEECCTTCCGG-----------GG----TTHHHHHHHHTEEEEE-
T ss_pred eEeecccccCCeEEEEEEe---C-------CCCEEEEECCCCCcHH-----------HH----HHHHHHHHHCCcEEEE-
Confidence 3445666778888874433 1 2588999999753211 11 1346678899999999
Q ss_pred CCCCCCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEeccCCC
Q 002164 719 PTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYN 795 (958)
Q Consensus 719 ~~~~~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~ 795 (958)
.|.+|+|.+... ........+|+.++++++ +.++++++|||+||.+++.+++++ |++++++|++++...
T Consensus 57 --~D~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~ 128 (456)
T 3vdx_A 57 --YDRRGFGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEP 128 (456)
T ss_dssp --ECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCS
T ss_pred --ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccc
Confidence 555677777543 223567788888888876 345899999999999998888876 899999999998654
Q ss_pred CCCCCCCccccc--ch-----------------------hh---------hcHHHH-------------------H--hc
Q 002164 796 RTLTPFGFQNED--RT-----------------------LW---------EATSTY-------------------V--EM 820 (958)
Q Consensus 796 ~~~~~~~~~~~~--~~-----------------------~~---------~~~~~~-------------------~--~~ 820 (958)
............ .. .+ .....+ . ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (456)
T 3vdx_A 129 FLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYT 208 (456)
T ss_dssp CCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTC
T ss_pred ccccccccccccchHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhh
Confidence 221110000000 00 00 000000 0 11
Q ss_pred CcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhcc
Q 002164 821 SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 821 sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
+....+.++++|+|+++|++|..+| +....+.++.+. ..++++++|++||.+. .+....+.+.+.+||.+++..
T Consensus 209 d~~~~l~~i~~PvLiI~G~~D~~vp--~~~~~~~l~~~~---~~~~~~~i~gagH~~~-~e~p~~v~~~I~~FL~~~l~~ 282 (456)
T 3vdx_A 209 DFRADIPRIDVPALILHGTGDRTLP--IENTARVFHKAL---PSAEYVEVEGAPHGLL-WTHAEEVNTALLAFLAKALEA 282 (456)
T ss_dssp CCTTTSTTCCSCCEEEEETTCSSSC--GGGTHHHHHHHC---TTSEEEEETTCCSCTT-TTTHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhhCCCCEEEEEeCCCCCcC--HHHHHHHHHHHC---CCceEEEeCCCCCcch-hhCHHHHHHHHHHHHHHhhcc
Confidence 2334567889999999999999998 774444333332 2469999999999975 467788999999999998753
No 161
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.65 E-value=2e-15 Score=157.64 Aligned_cols=200 Identities=12% Similarity=0.080 Sum_probs=130.6
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAV 747 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~av 747 (958)
.|.||++||..... ..| ......|+++||.|++ .|.+|+|.+.... .......+|+.+++
T Consensus 16 ~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~~GhG~s~~~~~~~~~~~~~~d~~~~~ 77 (247)
T 1tqh_A 16 ERAVLLLHGFTGNS-----------ADV----RMLGRFLESKGYTCHA---PIYKGHGVPPEELVHTGPDDWWQDVMNGY 77 (247)
T ss_dssp SCEEEEECCTTCCT-----------HHH----HHHHHHHHHTTCEEEE---CCCTTSSSCHHHHTTCCHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCh-----------HHH----HHHHHHHHHCCCEEEe---cccCCCCCCHHHhcCCCHHHHHHHHHHHH
Confidence 36788999953211 111 1345567789999999 6667888654321 12455667888888
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC-C--Cc---c-------cccch-hhhc
Q 002164 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-F--GF---Q-------NEDRT-LWEA 813 (958)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~--~~---~-------~~~~~-~~~~ 813 (958)
+++.+.+. +++.|+||||||.+++.+|.++| ++++|+.++........ . .+ . ..... ....
T Consensus 78 ~~l~~~~~---~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (247)
T 1tqh_A 78 EFLKNKGY---EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQE 152 (247)
T ss_dssp HHHHHHTC---CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHcCC---CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhh
Confidence 88877643 58999999999999999999997 88888655432211000 0 00 0 00000 0000
Q ss_pred -----------HHHHHh--cCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc
Q 002164 814 -----------TSTYVE--MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR 880 (958)
Q Consensus 814 -----------~~~~~~--~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~ 880 (958)
...+.. .+....+.++++|+|++||++|..+| ++.++++++.++. ..++++++|++||.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e 228 (247)
T 1tqh_A 153 MEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMIN--PDSANIIYNEIES--PVKQIKWYEQSGHVITLD 228 (247)
T ss_dssp HHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSC--TTHHHHHHHHCCC--SSEEEEEETTCCSSGGGS
T ss_pred hhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCC--cchHHHHHHhcCC--CceEEEEeCCCceeeccC
Confidence 000000 01223567789999999999999998 8888888877643 247999999999997544
Q ss_pred ccHHHHHHHHHHHHHH
Q 002164 881 ESIMHVLWETDRWLQK 896 (958)
Q Consensus 881 ~~~~~~~~~i~~fl~~ 896 (958)
+....+.+.+.+||++
T Consensus 229 ~~~~~~~~~i~~Fl~~ 244 (247)
T 1tqh_A 229 QEKDQLHEDIYAFLES 244 (247)
T ss_dssp TTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh
Confidence 4467888999999976
No 162
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.65 E-value=2.7e-14 Score=162.52 Aligned_cols=258 Identities=10% Similarity=0.082 Sum_probs=165.8
Q ss_pred ceeEEEccCCCCCCceeeecc---C-CCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCC
Q 002164 164 GIGIHQLFPDGKLGQEIEIQG---F-PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD 239 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~---~-~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~ 239 (958)
.|++|++.+ ++...... + .....+...+|+|||+.++... ....|++|++++++.........
T Consensus 145 ~i~~~d~~~----g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~---------~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 145 GMDVLDINS----GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM---------QANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp SEEEEETTT----CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG---------GGTEEEEEETTTCCEEEEEECSS
T ss_pred eEEEEECCC----CeEeeecCcccccccCCceeEEEEcCCCEEEEEEC---------CCCEEEEEECCCceEEEEEcCCC
Confidence 689999854 33322210 0 1123677889999997665532 25689999999877654433222
Q ss_pred ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 240 ~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
.. +..++|+|||+.|+++.. ....|+++
T Consensus 212 ~~----~~~~~~~~~~~~l~~~~~------------------------------------------------~~~~i~~~ 239 (433)
T 3bws_A 212 KW----SKILLYDPIRDLVYCSNW------------------------------------------------ISEDISVI 239 (433)
T ss_dssp SS----EEEEEEETTTTEEEEEET------------------------------------------------TTTEEEEE
T ss_pred CC----eeEEEEcCCCCEEEEEec------------------------------------------------CCCcEEEE
Confidence 22 668999999998876610 12468899
Q ss_pred Ec-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCccccccc
Q 002164 320 SL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSV 397 (958)
Q Consensus 320 ~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~ 397 (958)
++ +++....... ..+..++|+|||++|++........ ...++.|++||+.+++.......+
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~-----~~~dg~i~~~d~~~~~~~~~~~~~------------ 302 (433)
T 3bws_A 240 DRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQ-----ESGGGRLGIYSMDKEKLIDTIGPP------------ 302 (433)
T ss_dssp ETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTT-----CSCCEEEEEEETTTTEEEEEEEEE------------
T ss_pred ECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCcc-----ccCCCeEEEEECCCCcEEeeccCC------------
Confidence 98 7765544433 6678899999999999887432100 012458999999876554433211
Q ss_pred ccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEecc
Q 002164 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (958)
Q Consensus 398 ~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~ 477 (958)
..+..+.|+|||+.+++.. ...+.+++|++ .+++..........+..++|+|||+.|+......
T Consensus 303 -~~~~~~~~~~~g~~l~~~~------------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 303 -GNKRHIVSGNTENKIYVSD------------MCCSKIEVYDL---KEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp -ECEEEEEECSSTTEEEEEE------------TTTTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEEEEEECCC
T ss_pred -CCcceEEECCCCCEEEEEe------------cCCCEEEEEEC---CCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCC
Confidence 2346789999999887741 34567999996 4444433334455567899999999988876543
Q ss_pred cc-----------ceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 478 TR-----------RTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 478 ~~-----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
.. ...|+++++.++ +........ ..+.. +.|+|||++|+...
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTD--TVKEFWEAG-NQPTG------LDVSPDNRYLVISD 419 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTT--EEEEEEECS-SSEEE------EEECTTSCEEEEEE
T ss_pred CccccccccccccceEEEEEECCCC--cEEEEecCC-CCCce------EEEcCCCCEEEEEE
Confidence 21 137899998774 333333221 12222 78999999988765
No 163
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.65 E-value=5.2e-14 Score=153.91 Aligned_cols=289 Identities=12% Similarity=-0.012 Sum_probs=168.9
Q ss_pred eceeEEEccCCCCCCce-eeeccCCCCC-cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCc
Q 002164 163 TGIGIHQLFPDGKLGQE-IEIQGFPDGA-KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI 240 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~-~~lt~~~~~~-~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~ 240 (958)
+.|++|++.+ ++. +.+. ..... ....++|||||++|+++.. ....|+++++.+++.......+..
T Consensus 11 ~~v~~~d~~~----~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~--------~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 11 DKLVVIDTEK----MAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVN--------KSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp TEEEEEETTT----TEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEET--------TTTEEEEEETTTCCEEEEEECCBT
T ss_pred CeEEEEECCC----CcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeC--------CCCeEEEEECCCCCeEeeEEcCCc
Confidence 4789999854 332 2332 22111 3678999999999888642 246899999998887543322210
Q ss_pred c-ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 241 Y-LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 241 ~-~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
. ....+..++|+|||+.|+++....... ..... ....+|+++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~-------------------------------~~~~~------~~~~~i~v~ 120 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLE-------------------------------LTHFE------VQPTRVALY 120 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEEC-------------------------------SSCEE------ECCCEEEEE
T ss_pred ccccccccceEECCCCCEEEEEecccccc-------------------------------ccccc------ccCceEEEE
Confidence 0 000155899999999988772100000 00000 012569999
Q ss_pred Ec-CCeee-ecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCccccccc
Q 002164 320 SL-DGTVK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSV 397 (958)
Q Consensus 320 ~~-~g~~~-~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~ 397 (958)
++ +++.. .+..+.....++|||||++|++.. +.+++||+++++.........
T Consensus 121 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~~~~~~~----------- 174 (337)
T 1pby_B 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDKPIQS----------- 174 (337)
T ss_dssp ETTTTEEEEEEECCSSCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEECSTT-----------
T ss_pred ECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC---------------CeEEEEECCCCcEeeeeeccc-----------
Confidence 99 77544 333334567789999999998882 279999998766543322111
Q ss_pred ccCcceeeeecCCCCceEEEE------------eccCCCcccccccCCeEEEEeCCCCCCCCceEEEe--eccccCceee
Q 002164 398 RKGMRSINWRSDKPSTLYWAE------------TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISW 463 (958)
Q Consensus 398 ~~~~~~~~~spDG~~l~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~--~~~~~~~~~~ 463 (958)
....+.|+|||+.+++... ...++.... ......|+++++ .+++...+.. .......+.|
T Consensus 175 --~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T 1pby_B 175 --WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP-TAYRTGLLTMDL---ETGEMAMREVRIMDVFYFSTAV 248 (337)
T ss_dssp --TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG-GGEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEE
T ss_pred --cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccc-cccccceEEEeC---CCCCceEeecCCCCCceeeEEE
Confidence 1124479999998765210 000000000 011125788985 5555543322 2223446899
Q ss_pred ecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccC
Q 002164 464 CDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGN 543 (958)
Q Consensus 464 spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~ 543 (958)
+|||++|++. + ..|+++++.++ +........ ..... +.|+|||++|+....
T Consensus 249 s~dg~~l~~~---~---~~v~~~d~~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~~-------------- 299 (337)
T 1pby_B 249 NPAKTRAFGA---Y---NVLESFDLEKN--ASIKRVPLP-HSYYS------VNVSTDGSTVWLGGA-------------- 299 (337)
T ss_dssp CTTSSEEEEE---E---SEEEEEETTTT--EEEEEEECS-SCCCE------EEECTTSCEEEEESB--------------
T ss_pred CCCCCEEEEe---C---CeEEEEECCCC--cCcceecCC-Cceee------EEECCCCCEEEEEcC--------------
Confidence 9999998877 1 46888898774 222222211 11122 789999998876531
Q ss_pred CCCCCCCCCeEEEEECCCCceEEEec
Q 002164 544 GATPEGNIPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 544 ~~~~~~~~~~L~~~dl~~g~~~~l~~ 569 (958)
...|.+||+++++......
T Consensus 300 -------~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 300 -------LGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp -------SSEEEEEETTTCCEEEEEE
T ss_pred -------CCcEEEEECcCCcEEEEEE
Confidence 1259999999887665543
No 164
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.65 E-value=2.9e-14 Score=160.16 Aligned_cols=239 Identities=15% Similarity=0.123 Sum_probs=146.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..+.|||||++|+... ....|.+||+++++........... +..++|+|||+.|+...
T Consensus 125 ~v~~v~~s~dg~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~p~~~~l~s~s------- 184 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGA---------EDRLIRIWDIENRKIVMILQGHEQD----IYSLDYFPSGDKLVSGS------- 184 (393)
T ss_dssp BEEEEEECTTSSEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEE-------
T ss_pred eEEEEEECCCCCEEEEEc---------CCCeEEEEECCCCcEEEEEccCCCC----EEEEEEcCCCCEEEEec-------
Confidence 367899999999998855 2568899999988766554433332 77899999999988661
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeee-cCCCccccccccCC-CCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPPAVYTSLDPSP-DEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~-l~~~~~~~~~~~Sp-DGk~l 346 (958)
....|.++++ +++... +.....+...+|+| ||+.|
T Consensus 185 ------------------------------------------~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 185 ------------------------------------------GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp ------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred ------------------------------------------CCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 2245777788 775433 33335677889999 99998
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 425 (958)
+..+.+ +.+.+||+.++.. +.+..... ...+....+..+.|+|||+.|+..
T Consensus 223 ~~~s~d-------------~~v~iwd~~~~~~~~~~~~~~~------~~~~h~~~v~~v~~~~~g~~l~s~--------- 274 (393)
T 1erj_A 223 AAGSLD-------------RAVRVWDSETGFLVERLDSENE------SGTGHKDSVYSVVFTRDGQSVVSG--------- 274 (393)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSEEEEE---------
T ss_pred EEEcCC-------------CcEEEEECCCCcEEEeeccccc------CCCCCCCCEEEEEECCCCCEEEEE---------
Confidence 887733 4899999986543 33321100 001122456789999999987652
Q ss_pred ccccccCCeEEEEeCCCCC----------CCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCc
Q 002164 426 KVEVTPRDIIYTQQAEPVQ----------GEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP 495 (958)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~----------g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 495 (958)
+..+.|.+|++.... +.....+..+...+..++|+|+|++|+..+.++ .|.++++.++ +.
T Consensus 275 ----s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~----~v~iwd~~~~--~~ 344 (393)
T 1erj_A 275 ----SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR----GVLFWDKKSG--NP 344 (393)
T ss_dssp ----ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS----EEEEEETTTC--CE
T ss_pred ----eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC----eEEEEECCCC--eE
Confidence 445678888862110 001112233445567789999999988765443 3566666664 33
Q ss_pred EEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 496 RILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
..........+..-...+...|+|++..|+...
T Consensus 345 ~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 345 LLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred EEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 444444433333300001012345787777665
No 165
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.1e-14 Score=157.79 Aligned_cols=318 Identities=9% Similarity=0.030 Sum_probs=193.1
Q ss_pred ceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeE
Q 002164 178 QEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTL 257 (958)
Q Consensus 178 ~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~ 257 (958)
....+.++ ...+...+|||||++|+.... ...|++|++.+++........... +..++|+|||+.
T Consensus 24 ~~~~l~~h--~~~v~~~~~s~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~ 88 (369)
T 3zwl_B 24 KAIKLTGH--ERPLTQVKYNKEGDLLFSCSK---------DSSASVWYSLNGERLGTLDGHTGT----IWSIDVDCFTKY 88 (369)
T ss_dssp EEEEEECC--SSCEEEEEECTTSCEEEEEES---------SSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSE
T ss_pred ccEEEEEe--eceEEEEEEcCCCCEEEEEeC---------CCEEEEEeCCCchhhhhhhhcCCc----EEEEEEcCCCCE
Confidence 34445543 357899999999999988652 558899999888766544433322 778999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCCcccc
Q 002164 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPAVYT 335 (958)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~~~~~ 335 (958)
|+... ....|.++++ +++.. .+.....+.
T Consensus 89 l~s~~-------------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~v~ 119 (369)
T 3zwl_B 89 CVTGS-------------------------------------------------ADYSIKLWDVSNGQCVATWKSPVPVK 119 (369)
T ss_dssp EEEEE-------------------------------------------------TTTEEEEEETTTCCEEEEEECSSCEE
T ss_pred EEEEe-------------------------------------------------CCCeEEEEECCCCcEEEEeecCCCeE
Confidence 98761 2245788888 66443 333336788
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccc--cCcceeeeecCCCC
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVR--KGMRSINWRSDKPS 412 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~--~~~~~~~~spDG~~ 412 (958)
.+.|+|||+.|+...... ....+.+.+|++..... ..+...... ......... ..+..+.|+|||+.
T Consensus 120 ~~~~~~~~~~l~~~~~~~--------~~~~g~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (369)
T 3zwl_B 120 RVEFSPCGNYFLAILDNV--------MKNPGSINIYEIERDSATHELTKVSEE--PIHKIITHEGLDAATVAGWSTKGKY 189 (369)
T ss_dssp EEEECTTSSEEEEEECCB--------TTBCCEEEEEEEEECTTTCCEEEECSS--CSEEEECCTTCCCEEEEEECGGGCE
T ss_pred EEEEccCCCEEEEecCCc--------cCCCCEEEEEEecCCccceeecccccc--eeeeccCCcCccceeEEEEcCCCCE
Confidence 999999999999887431 11235899999874321 111100000 000000111 14578999999998
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEeCCCCC-CCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
++.. +..+.|++|++ .. +.....+......+..+.|+|||+.|+.....+ .|+++++.++
T Consensus 190 l~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~ 250 (369)
T 3zwl_B 190 IIAG-------------HKDGKISKYDV--SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDT----NSFLVDVSTL 250 (369)
T ss_dssp EEEE-------------ETTSEEEEEET--TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTS----EEEEEETTTC
T ss_pred EEEE-------------cCCCEEEEEEC--CCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCc----eEEEEECCCC
Confidence 8763 44567999996 22 223334455566788899999999998775433 4667777664
Q ss_pred CCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCC
Q 002164 492 DVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (958)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~ 571 (958)
+....... ...+.. +.|+|+|++++...... ...++.... ......+.+||+.+++........
T Consensus 251 --~~~~~~~~-~~~~~~------~~~~~~~~~l~~~~~~~---~~~~~~~~~----~~~~~~i~~~d~~~~~~~~~~~~~ 314 (369)
T 3zwl_B 251 --QVLKKYET-DCPLNT------AVITPLKEFIILGGGQE---AKDVTTTSA----NEGKFEARFYHKIFEEEIGRVQGH 314 (369)
T ss_dssp --CEEEEEEC-SSCEEE------EEECSSSSEEEEEECCC--------------------CEEEEEETTTCCEEEEEECC
T ss_pred --ceeeeecC-CCCcee------EEecCCCceEEEeecCC---CceEEEEec----CCCcceeEEEecCCCcchhheecc
Confidence 22333322 122222 78999999998886321 111111110 112336999999888776655433
Q ss_pred cccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002164 572 KEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (958)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g 619 (958)
.. .+. ..+|+||++.++.... ...+.++++.++
T Consensus 315 ~~----~v~-------~~~~s~~~~~l~s~~~----dg~v~iw~~~~~ 347 (369)
T 3zwl_B 315 FG----PLN-------TVAISPQGTSYASGGE----DGFIRLHHFEKS 347 (369)
T ss_dssp SS----CEE-------EEEECTTSSEEEEEET----TSEEEEEEECHH
T ss_pred cC----cEE-------EEEECCCCCEEEEEcC----CCeEEEEECccc
Confidence 21 122 2578999987665443 245888887654
No 166
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.65 E-value=3.5e-15 Score=156.49 Aligned_cols=211 Identities=18% Similarity=0.140 Sum_probs=132.5
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G 727 (958)
+|.+++...+-+ + .|.||++||.+... ...| ...+..|+++||.|++ .|.+|+|
T Consensus 10 ~g~~l~~~~~g~--------~-~~~vvllHG~~~~~----------~~~~----~~~~~~l~~~g~~vi~---~D~~G~G 63 (254)
T 2ocg_A 10 NGVQLHYQQTGE--------G-DHAVLLLPGMLGSG----------ETDF----GPQLKNLNKKLFTVVA---WDPRGYG 63 (254)
T ss_dssp TTEEEEEEEEEC--------C-SEEEEEECCTTCCH----------HHHC----HHHHHHSCTTTEEEEE---ECCTTST
T ss_pred CCEEEEEEEecC--------C-CCeEEEECCCCCCC----------ccch----HHHHHHHhhCCCeEEE---ECCCCCC
Confidence 788887655421 1 36788999953110 0011 1345567788999999 5666788
Q ss_pred Ccccch-hhH-HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC-------
Q 002164 728 DEEAND-RFV-EQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL------- 798 (958)
Q Consensus 728 ~~~~~~-~~~-~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~------- 798 (958)
.+.... .+. .....++.++++++.+.+ .+++.++||||||.+|+.+|.++|++++++|+.++......
T Consensus 64 ~S~~~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 140 (254)
T 2ocg_A 64 HSRPPDRDFPADFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYE 140 (254)
T ss_dssp TCCSSCCCCCTTHHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHH
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHH
Confidence 775321 111 112334445555555543 35899999999999999999999999999999876432110
Q ss_pred --CCCC-cccccc-------------hhhhcH-HHHHhc-------CcccccCCCCCCEEEEeeCCCCCCCCChHHHHHH
Q 002164 799 --TPFG-FQNEDR-------------TLWEAT-STYVEM-------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (958)
Q Consensus 799 --~~~~-~~~~~~-------------~~~~~~-~~~~~~-------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (958)
.... +..... ..|... ..+... .....+.++++|+|+++|++|..+| +..+..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~ 218 (254)
T 2ocg_A 141 GIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP--RFHADFI 218 (254)
T ss_dssp TTSCGGGSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSC--HHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCC--HHHHHHH
Confidence 0000 000000 000000 000110 1233567889999999999999998 8888888
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 855 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
.+.++. .+++++|++||... .+....+.+.+.+||
T Consensus 219 ~~~~~~----~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 219 HKHVKG----SRLHLMPEGKHNLH-LRFADEFNKLAEDFL 253 (254)
T ss_dssp HHHSTT----CEEEEETTCCTTHH-HHTHHHHHHHHHHHH
T ss_pred HHhCCC----CEEEEcCCCCCchh-hhCHHHHHHHHHHHh
Confidence 776653 58899999999874 455677778888886
No 167
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.65 E-value=1.8e-14 Score=157.54 Aligned_cols=267 Identities=11% Similarity=-0.021 Sum_probs=181.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcc--------------cccceeeceeecCCCCCccceeeEeceeEEEccCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELA--------------RPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGK 175 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~ 175 (958)
.+..++|||||++|+... +....++.+. .....+..+.+.+++......+.++.|.+|++.. +.
T Consensus 53 ~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~ 130 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA-PT 130 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC-C-
T ss_pred ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCC-CC
Confidence 578899999999999887 3222222221 3344556677788766555555557899999854 21
Q ss_pred CCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCC
Q 002164 176 LGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNS 255 (958)
Q Consensus 176 ~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG 255 (958)
......+.. ....+....|+|||+.|+.... ...|++|++.+++........... +..++|+|||
T Consensus 131 ~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~---------dg~v~~~d~~~~~~~~~~~~~~~~----i~~~~~~~~~ 195 (337)
T 1gxr_A 131 PRIKAELTS--SAPACYALAISPDSKVCFSCCS---------DGNIAVWDLHNQTLVRQFQGHTDG----ASCIDISNDG 195 (337)
T ss_dssp -EEEEEEEC--SSSCEEEEEECTTSSEEEEEET---------TSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTS
T ss_pred cceeeeccc--CCCceEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCceeeeeecccCc----eEEEEECCCC
Confidence 111223332 2346888999999999888652 557999999888765544333322 7789999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCC-Ccc
Q 002164 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP-PAV 333 (958)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~-~~~ 333 (958)
+.|+... ....|.++++ +++...... ...
T Consensus 196 ~~l~~~~-------------------------------------------------~dg~i~~~d~~~~~~~~~~~~~~~ 226 (337)
T 1gxr_A 196 TKLWTGG-------------------------------------------------LDNTVRSWDLREGRQLQQHDFTSQ 226 (337)
T ss_dssp SEEEEEE-------------------------------------------------TTSEEEEEETTTTEEEEEEECSSC
T ss_pred CEEEEEe-------------------------------------------------cCCcEEEEECCCCceEeeecCCCc
Confidence 9988761 2345888888 665443333 366
Q ss_pred ccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCc
Q 002164 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (958)
Q Consensus 334 ~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l 413 (958)
+..++|+|||+.|++...+ +.+.+|++.++....+..+. ..+..+.|+|||+.+
T Consensus 227 v~~~~~s~~~~~l~~~~~~-------------~~i~~~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l 280 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAVGMES-------------SNVEVLHVNKPDKYQLHLHE-------------SCVLSLKFAYCGKWF 280 (337)
T ss_dssp EEEEEECTTSSEEEEEETT-------------SCEEEEETTSSCEEEECCCS-------------SCEEEEEECTTSSEE
T ss_pred eEEEEECCCCCEEEEEcCC-------------CcEEEEECCCCCeEEEcCCc-------------cceeEEEECCCCCEE
Confidence 7889999999999988733 48999999977655443321 345789999999987
Q ss_pred eEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEE
Q 002164 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (958)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (958)
+.. +..+.+++|++ ..++..........+..+.|+|||+.|+.....+. ..+|.+
T Consensus 281 ~~~-------------~~dg~i~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--i~iw~~ 335 (337)
T 1gxr_A 281 VST-------------GKDNLLNAWRT---PYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKK--ATVYEV 335 (337)
T ss_dssp EEE-------------ETTSEEEEEET---TTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSC--EEEEEE
T ss_pred EEe-------------cCCCcEEEEEC---CCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCe--EEEEEE
Confidence 763 44567999996 44444444455667788999999999887764433 566654
No 168
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.65 E-value=5.3e-14 Score=158.50 Aligned_cols=267 Identities=12% Similarity=0.143 Sum_probs=169.3
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~ 242 (958)
+.|++|++.+ +....+....+...+...+|+|||+.|+.... ...|.+|++.+++...........
T Consensus 113 ~~v~lw~~~~----~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~- 178 (401)
T 4aez_A 113 RNVYVWNADS----GSVSALAETDESTYVASVKWSHDGSFLSVGLG---------NGLVDIYDVESQTKLRTMAGHQAR- 178 (401)
T ss_dssp TEEEEEETTT----CCEEEEEECCTTCCEEEEEECTTSSEEEEEET---------TSCEEEEETTTCCEEEEECCCSSC-
T ss_pred CeEEEeeCCC----CcEeEeeecCCCCCEEEEEECCCCCEEEEECC---------CCeEEEEECcCCeEEEEecCCCCc-
Confidence 4799999965 44333322323447899999999999988652 558899999887765544333322
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-
Q 002164 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (958)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~- 321 (958)
+..++| +++.|+... ..+.|.++++
T Consensus 179 ---v~~~~~--~~~~l~~~~-------------------------------------------------~dg~i~i~d~~ 204 (401)
T 4aez_A 179 ---VGCLSW--NRHVLSSGS-------------------------------------------------RSGAIHHHDVR 204 (401)
T ss_dssp ---EEEEEE--ETTEEEEEE-------------------------------------------------TTSEEEEEETT
T ss_pred ---eEEEEE--CCCEEEEEc-------------------------------------------------CCCCEEEEecc
Confidence 667888 456676551 2245777777
Q ss_pred CC--eeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCccccccc
Q 002164 322 DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSV 397 (958)
Q Consensus 322 ~g--~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~ 397 (958)
.+ ....+... ..+..++|+|||+.|+..+.+ +.|.+||+.++.. ..+..+
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~~~------------- 258 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND-------------NVVQIWDARSSIPKFTKTNH------------- 258 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTCSSEEEEECCC-------------
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC-------------CeEEEccCCCCCccEEecCC-------------
Confidence 33 23344444 678899999999999988743 4899999986543 333221
Q ss_pred ccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEecc
Q 002164 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (958)
Q Consensus 398 ~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~ 477 (958)
...+..+.|+|+|..+++.... ...+.|++|++ ..++..........+..+.|+|+|+.|+......
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~g----------s~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGG----------TMDKQIHFWNA---ATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECC----------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECTT
T ss_pred cceEEEEEECCCCCCEEEEecC----------CCCCEEEEEEC---CCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecC
Confidence 1346789999999988874110 13567999996 4444443444556688899999999999876433
Q ss_pred ccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEE
Q 002164 478 TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (958)
Q Consensus 478 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 557 (958)
.+...+|.+. ++..............+.. +.|+|||++|+....+ ..|.+|
T Consensus 326 dg~i~v~~~~--~~~~~~~~~~~~h~~~v~~------~~~s~dg~~l~s~~~d---------------------g~i~iw 376 (401)
T 4aez_A 326 DNNLSIWSYS--SSGLTKQVDIPAHDTRVLY------SALSPDGRILSTAASD---------------------ENLKFW 376 (401)
T ss_dssp TCEEEEEEEE--TTEEEEEEEEECCSSCCCE------EEECTTSSEEEEECTT---------------------SEEEEE
T ss_pred CCcEEEEecC--CccceeEEEecCCCCCEEE------EEECCCCCEEEEEeCC---------------------CcEEEE
Confidence 3224555544 4211111112233333333 7899999998877521 259999
Q ss_pred ECCCCceE
Q 002164 558 DINTGSKE 565 (958)
Q Consensus 558 dl~~g~~~ 565 (958)
++.+++..
T Consensus 377 ~~~~~~~~ 384 (401)
T 4aez_A 377 RVYDGDHV 384 (401)
T ss_dssp ECCC----
T ss_pred ECCCCccc
Confidence 99877643
No 169
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.64 E-value=1.2e-13 Score=150.28 Aligned_cols=277 Identities=13% Similarity=0.066 Sum_probs=172.2
Q ss_pred CcccceeecCC----CCeEEEEEeeccccCCCCCceEEEEEcCCCceeec--cCCCCccccccccceEEecCCeEEEEEe
Q 002164 189 AKLNFVTWSQD----GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (958)
Q Consensus 189 ~~~~~~~wSPD----G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~l--t~~~~~~~~~~~~~~~wspDG~~l~~~~ 262 (958)
..+...+|+|+ ++.|+... . ...|.+|+..+++.... ...... .+..++|++++..++...
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs-------~--D~~v~vW~~~~~~~~~~~~l~gh~~----~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGS-------L--DDLVKVWKWRDERLDLQWSLEGHQL----GVVSVDISHTLPIAASSS 99 (321)
T ss_dssp SCEEEEEEC-------CEEEEEE-------T--TSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECSSSSEEEEEE
T ss_pred CcEEEEEEecCCCCCCCEEEEEc-------C--CCCEEEEECCCCCeeeeeeeccCCC----CEEEEEECCCCCEEEEEe
Confidence 57899999986 45666644 2 33455555555443221 122222 267899999999888661
Q ss_pred cCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-cccccccc
Q 002164 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDP 339 (958)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~ 339 (958)
....|.++++ +|+. ..+... ..+..++|
T Consensus 100 -------------------------------------------------~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~ 130 (321)
T 3ow8_A 100 -------------------------------------------------LDAHIRLWDLENGKQIKSIDAGPVDAWTLAF 130 (321)
T ss_dssp -------------------------------------------------TTSEEEEEETTTTEEEEEEECCTTCCCCEEE
T ss_pred -------------------------------------------------CCCcEEEEECCCCCEEEEEeCCCccEEEEEE
Confidence 2345778888 6643 344433 56778999
Q ss_pred CCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEE
Q 002164 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (958)
Q Consensus 340 SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~ 418 (958)
||||++|+..+. .+.+.+|+++.+.. ..+.... ..+..++|+|||+.|+..
T Consensus 131 spdg~~l~~g~~-------------dg~v~i~~~~~~~~~~~~~~~~-------------~~v~~~~~spdg~~lasg-- 182 (321)
T 3ow8_A 131 SPDSQYLATGTH-------------VGKVNIFGVESGKKEYSLDTRG-------------KFILSIAYSPDGKYLASG-- 182 (321)
T ss_dssp CTTSSEEEEECT-------------TSEEEEEETTTCSEEEEEECSS-------------SCEEEEEECTTSSEEEEE--
T ss_pred CCCCCEEEEEcC-------------CCcEEEEEcCCCceeEEecCCC-------------ceEEEEEECCCCCEEEEE--
Confidence 999999988763 34899999985543 2332211 234678999999988763
Q ss_pred eccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002164 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (958)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 498 (958)
+..+.|.+||+ ..+.....+......+..+.|+|||+.|+..+.++. |.++++..+ +....
T Consensus 183 -----------~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~----i~iwd~~~~--~~~~~ 243 (321)
T 3ow8_A 183 -----------AIDGIINIFDI--ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY----IKIYDVQHA--NLAGT 243 (321)
T ss_dssp -----------ETTSCEEEEET--TTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC----EEEEETTTC--CEEEE
T ss_pred -----------cCCCeEEEEEC--CCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe----EEEEECCCc--ceeEE
Confidence 44567899996 233333444555667888999999998887754433 444455543 22333
Q ss_pred eccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccce
Q 002164 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (958)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~ 578 (958)
.......+.. ++|+|||++|+....+ ..|.+||+.+++.......... .
T Consensus 244 ~~~h~~~v~~------~~~sp~~~~l~s~s~D---------------------~~v~iwd~~~~~~~~~~~~h~~----~ 292 (321)
T 3ow8_A 244 LSGHASWVLN------VAFCPDDTHFVSSSSD---------------------KSVKVWDVGTRTCVHTFFDHQD----Q 292 (321)
T ss_dssp ECCCSSCEEE------EEECTTSSEEEEEETT---------------------SCEEEEETTTTEEEEEECCCSS----C
T ss_pred EcCCCCceEE------EEECCCCCEEEEEeCC---------------------CcEEEEeCCCCEEEEEEcCCCC----c
Confidence 3333333333 7899999998877621 2599999988876554433221 1
Q ss_pred eEeecCCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002164 579 TVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (958)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~ 616 (958)
+. ..+|++||+.++..... ..+.+++.
T Consensus 293 v~-------~v~~s~~g~~l~s~~~d----~~i~vwd~ 319 (321)
T 3ow8_A 293 VW-------GVKYNGNGSKIVSVGDD----QEIHIYDC 319 (321)
T ss_dssp EE-------EEEECTTSSEEEEEETT----CCEEEEEC
T ss_pred EE-------EEEECCCCCEEEEEeCC----CeEEEEeC
Confidence 22 24789999877644432 34666664
No 170
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.64 E-value=6.9e-16 Score=155.67 Aligned_cols=183 Identities=13% Similarity=0.089 Sum_probs=111.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC--CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR--GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAV 747 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~--G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av 747 (958)
.|+||++||.. +++..+ ........+.++ ||.|+++ +.+|+|.+ ..++ +
T Consensus 2 mptIl~lHGf~-----------ss~~s~--k~~~l~~~~~~~~~~~~v~~p---dl~~~g~~---------~~~~----l 52 (202)
T 4fle_A 2 MSTLLYIHGFN-----------SSPSSA--KATTFKSWLQQHHPHIEMQIP---QLPPYPAE---------AAEM----L 52 (202)
T ss_dssp -CEEEEECCTT-----------CCTTCH--HHHHHHHHHHHHCTTSEEECC---CCCSSHHH---------HHHH----H
T ss_pred CcEEEEeCCCC-----------CCCCcc--HHHHHHHHHHHcCCCcEEEEe---CCCCCHHH---------HHHH----H
Confidence 38999999942 111111 011223445554 5899984 44555422 2222 3
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCC----cccccchhhhcHHHHHhcCcc
Q 002164 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG----FQNEDRTLWEATSTYVEMSPF 823 (958)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~sp~ 823 (958)
+.+.+. .+.++|+|+|+||||++|+.+|.+.|....+++...+..+....... .....................
T Consensus 53 ~~~~~~--~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (202)
T 4fle_A 53 ESIVMD--KAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQ 130 (202)
T ss_dssp HHHHHH--HTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTC
T ss_pred HHHHHh--cCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhh
Confidence 333332 24579999999999999999999998877766655443221100000 000000000111111223444
Q ss_pred cccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
..+.++++|+||+||++|.+|| ++++.++++ ++++.++||++|.+... .++++.|.+||+
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp--~~~s~~l~~-------~~~l~i~~g~~H~~~~~---~~~~~~I~~FL~ 190 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLD--YRQAVAYYT-------PCRQTVESGGNHAFVGF---DHYFSPIVTFLG 190 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSC--HHHHHHHTT-------TSEEEEESSCCTTCTTG---GGGHHHHHHHHT
T ss_pred hhhhccCceEEEEEeCCCCCCC--HHHHHHHhh-------CCEEEEECCCCcCCCCH---HHHHHHHHHHHh
Confidence 5677888999999999999999 999988864 35899999999988644 345778888885
No 171
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.64 E-value=3.7e-14 Score=157.25 Aligned_cols=284 Identities=13% Similarity=0.115 Sum_probs=160.2
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~ 242 (958)
..|++|.+.... +..+.++.. .......++|||||++|+++...+ +..+...+|.++.++|+.+++........
T Consensus 27 ~~i~~~~~d~~~--g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~---~~~~~v~~~~~~~~~g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 27 KGIYTFRFNEET--GESLPLSDA-EVANPSYLIPSADGKFVYSVNEFS---KDQAAVSAFAFDKEKGTLHLLNTQKTMGA 100 (361)
T ss_dssp CEEEEEEEETTT--CCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCS---STTCEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CCEEEEEEeCCC--CCEEEeecc-cCCCCceEEECCCCCEEEEEEccC---CCCCcEEEEEEeCCCCcEEEeeEeccCCC
Confidence 367888774322 444444433 334567789999999998876311 12244556777776677766654321110
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-
Q 002164 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (958)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~- 321 (958)
....+++ ||+.|+++.. ....+.++++
T Consensus 101 --~p~~~~~--dg~~l~~~~~------------------------------------------------~~~~v~~~~~~ 128 (361)
T 3scy_A 101 --DPCYLTT--NGKNIVTANY------------------------------------------------SGGSITVFPIG 128 (361)
T ss_dssp --CEEEEEE--CSSEEEEEET------------------------------------------------TTTEEEEEEBC
T ss_pred --CcEEEEE--CCCEEEEEEC------------------------------------------------CCCEEEEEEeC
Confidence 0223444 8988887611 1233555555
Q ss_pred -CCeeeecCC-----C----------ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCce-------E
Q 002164 322 -DGTVKEIGP-----P----------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-------V 378 (958)
Q Consensus 322 -~g~~~~l~~-----~----------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-------~ 378 (958)
+|....+.. + .....++|||||++|++.... .+.+++|+++... .
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~------------~~~v~v~~~~~~~~~~~~~~l 196 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG------------TDQIHKFNINPNANADNKEKF 196 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTCCTTTCCCC
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC------------CCEEEEEEEcCCCCcccccce
Confidence 333222210 0 122458999999999887632 3478899887332 1
Q ss_pred EEe-----ccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe
Q 002164 379 REL-----CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK 453 (958)
Q Consensus 379 ~~l-----~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~ 453 (958)
... ...+ ...+++.+.|+|||+.+++.. ...+.|++|++ ++++.+.+..
T Consensus 197 ~~~~~~~~~~~~-----------~~~~~~~~~~spdg~~l~v~~------------~~~~~v~v~~~---~~g~~~~~~~ 250 (361)
T 3scy_A 197 LTKGTPEAFKVA-----------PGSGPRHLIFNSDGKFAYLIN------------EIGGTVIAFRY---ADGMLDEIQT 250 (361)
T ss_dssp EEEEEEEEEECC-----------TTCCEEEEEECTTSSEEEEEE------------TTTCEEEEEEE---ETTEEEEEEE
T ss_pred eecccccceecC-----------CCCCCeEEEEcCCCCEEEEEc------------CCCCeEEEEEe---cCCceEEeEE
Confidence 111 0111 013456899999999877741 12456888885 4444444432
Q ss_pred ecc------ccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccC-CccccCCCCCCceEeccCCceEEE
Q 002164 454 LDL------RYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS-SEDVYSDPGSPMMRRTSTGTYVIA 526 (958)
Q Consensus 454 ~~~------~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdG~~l~~ 526 (958)
... ....++|||||++|+++.........+|.++..++ +...+.... ..... .++|||||++|++
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g--~~~~~~~~~~g~~~~------~~~~spdg~~l~~ 322 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG--TLTKVGYQLTGIHPR------NFIITPNGKYLLV 322 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC--CEEEEEEEECSSCCC------EEEECTTSCEEEE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC--cEEEeeEecCCCCCc------eEEECCCCCEEEE
Confidence 211 12368999999998766544133367777776554 222222111 11111 1789999999887
Q ss_pred EeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEe
Q 002164 527 KIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (958)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~ 568 (958)
.... .+.-.+|.+|.++|+.+.+.
T Consensus 323 ~~~~------------------~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 323 ACRD------------------TNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EETT------------------TTEEEEEEECTTTCCEEECS
T ss_pred EECC------------------CCCEEEEEEECCCCcEeecc
Confidence 7521 11224666788888876654
No 172
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.64 E-value=7.7e-15 Score=155.60 Aligned_cols=212 Identities=16% Similarity=0.186 Sum_probs=135.2
Q ss_pred EEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCC
Q 002164 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (958)
Q Consensus 644 ~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~ 723 (958)
+++.+|.+++...+ + + .|.||++||.+... ..| ...+..|+++||.|++ .|.
T Consensus 3 ~~~~~g~~l~y~~~---g-----~--~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~ 54 (273)
T 1a8s_A 3 FTTRDGTQIYYKDW---G-----S--GQPIVFSHGWPLNA-----------DSW----ESQMIFLAAQGYRVIA---HDR 54 (273)
T ss_dssp EECTTSCEEEEEEE---S-----C--SSEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EecCCCcEEEEEEc---C-----C--CCEEEEECCCCCcH-----------HHH----hhHHhhHhhCCcEEEE---ECC
Confidence 56678888865544 1 1 36789999964221 111 2345678889999999 666
Q ss_pred CCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEeccCCCCCC--
Q 002164 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (958)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~-- 798 (958)
+|+|.+.... .......+|+.++++.+ +.+++.|+||||||.+++.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (273)
T 1a8s_A 55 RGHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKT 128 (273)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccC
Confidence 7888775431 23456677777777654 346899999999999999877665 899999999876421100
Q ss_pred --CCCCcc----------------------------c-c--c--------chhhhc-----H-------HHHHhcCcccc
Q 002164 799 --TPFGFQ----------------------------N-E--D--------RTLWEA-----T-------STYVEMSPFMS 825 (958)
Q Consensus 799 --~~~~~~----------------------------~-~--~--------~~~~~~-----~-------~~~~~~sp~~~ 825 (958)
.+.... . . . ...|.. . ..+...+....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (273)
T 1a8s_A 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTED 208 (273)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHH
T ss_pred ccccccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhh
Confidence 000000 0 0 0 000000 0 00111122334
Q ss_pred cCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 826 ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 826 ~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
+.++++|+|+++|++|..+| +....+.++.+.. ..+++++|++||.+. .++...+.+.+.+||.
T Consensus 209 l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 209 LKKIDVPTLVVHGDADQVVP--IEASGIASAALVK---GSTLKIYSGAPHGLT-DTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHTCCSCEEEEEETTCSSSC--STTTHHHHHHHST---TCEEEEETTCCSCHH-HHTHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEECCCCccCC--hHHHHHHHHHhCC---CcEEEEeCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 56789999999999999998 7755444443322 368999999999874 4567788888999985
No 173
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.64 E-value=8.9e-15 Score=153.70 Aligned_cols=206 Identities=13% Similarity=0.047 Sum_probs=136.5
Q ss_pred EEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCC
Q 002164 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (958)
Q Consensus 643 ~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~ 722 (958)
++...+|.+++...+-+ .|.||++||.+.... .| ......|+ +||.|++ .+
T Consensus 6 ~~~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~~~-----------~~----~~~~~~l~-~~~~vi~---~d 56 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSGS----------GPPVVLVGGALSTRA-----------GG----APLAERLA-PHFTVIC---YD 56 (262)
T ss_dssp EEECTTSCEEEEEEEEC----------SSEEEEECCTTCCGG-----------GG----HHHHHHHT-TTSEEEE---EC
T ss_pred eEEcCCCcEEEEEEcCC----------CCcEEEECCCCcChH-----------HH----HHHHHHHh-cCcEEEE---Ee
Confidence 45667899888666421 367899999642211 11 23444555 9999999 56
Q ss_pred CCCCCCcccch-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCC
Q 002164 723 IIGEGDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF 801 (958)
Q Consensus 723 ~~G~G~~~~~~-~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~ 801 (958)
.+|+|.+.... .......+|+.++++.+ + +++.++|||+||.+++.++.++| +++++|++++.........
T Consensus 57 ~~G~G~S~~~~~~~~~~~~~~~~~~~~~l------~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~ 128 (262)
T 3r0v_A 57 RRGRGDSGDTPPYAVEREIEDLAAIIDAA------G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRP 128 (262)
T ss_dssp CTTSTTCCCCSSCCHHHHHHHHHHHHHHT------T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSC
T ss_pred cCCCcCCCCCCCCCHHHHHHHHHHHHHhc------C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccc
Confidence 66788775443 22455566666666553 3 58999999999999999999999 9999999998655322110
Q ss_pred Cccccc-------------------------c------------hhhhcHHH----H--------HhcCcccccCCCCCC
Q 002164 802 GFQNED-------------------------R------------TLWEATST----Y--------VEMSPFMSANKLKKP 832 (958)
Q Consensus 802 ~~~~~~-------------------------~------------~~~~~~~~----~--------~~~sp~~~~~~~~~P 832 (958)
...... . ..|..... + ....+...+.++++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 208 (262)
T 3r0v_A 129 PVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIP 208 (262)
T ss_dssp CCCTTHHHHHHHHHHTTCHHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSC
T ss_pred hhhhHHHHHHHHHhhccchhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCC
Confidence 000000 0 00000000 0 001234556788999
Q ss_pred EEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 833 ILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 833 ~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
+|+++|++|..+| ++.+.++.+.+.. +++++++++||. ++...+.+.+.+||+
T Consensus 209 ~lii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~~~~gH~----~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 209 TLVMDGGASPAWI--RHTAQELADTIPN----ARYVTLENQTHT----VAPDAIAPVLVEFFT 261 (262)
T ss_dssp EEEEECTTCCHHH--HHHHHHHHHHSTT----EEEEECCCSSSS----CCHHHHHHHHHHHHC
T ss_pred EEEEeecCCCCCC--HHHHHHHHHhCCC----CeEEEecCCCcc----cCHHHHHHHHHHHHh
Confidence 9999999999988 8888888777643 689999999993 345777888888875
No 174
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.64 E-value=1.7e-13 Score=159.80 Aligned_cols=321 Identities=9% Similarity=0.015 Sum_probs=186.5
Q ss_pred eceeEEEccCCCCCCc-eeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEc--CCCceeeccCCCC
Q 002164 163 TGIGIHQLFPDGKLGQ-EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADV--DTGKARPLFQSPD 239 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~-~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~--~~g~~~~lt~~~~ 239 (958)
+.|.+|+..+ ++ ...+. .+..+...+|||||++|+.... ...|.++|+ ++++...-.....
T Consensus 159 ~~V~v~D~~t----~~~~~~i~---~g~~~~~v~~spdg~~l~v~~~---------d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 159 GQIALVDGDS----KKIVKVID---TGYAVHISRMSASGRYLLVIGR---------DARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp TEEEEEETTT----CCEEEEEE---CSTTEEEEEECTTSCEEEEEET---------TSEEEEEETTSSSCEEEEEEECCS
T ss_pred CeEEEEECCC----ceEEEEEe---cCcccceEEECCCCCEEEEECC---------CCeEEEEECcCCCCcEEEEEecCC
Confidence 3688998754 33 23332 2223667889999999887652 368999999 6766543332222
Q ss_pred ccccccccceEEec----CCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcce
Q 002164 240 IYLNAIFDNFVWVN----NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQ 315 (958)
Q Consensus 240 ~~~~~~~~~~~wsp----DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~ 315 (958)
. ...++||| ||++|++... ...+
T Consensus 223 ~-----p~~va~sp~~~~dg~~l~v~~~------------------------------------------------~~~~ 249 (543)
T 1nir_A 223 E-----ARSVESSKFKGYEDRYTIAGAY------------------------------------------------WPPQ 249 (543)
T ss_dssp E-----EEEEEECCSTTCTTTEEEEEEE------------------------------------------------ESSE
T ss_pred C-----cceEEeCCCcCCCCCEEEEEEc------------------------------------------------cCCe
Confidence 1 56889999 9999987610 1234
Q ss_pred EEEEEc-CCeee-ecCC-----------C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEe
Q 002164 316 LVLVSL-DGTVK-EIGP-----------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVREL 381 (958)
Q Consensus 316 l~~~~~-~g~~~-~l~~-----------~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l 381 (958)
|.++|. +++.. .+.. . ..+..+.+||||+.+++.... .+.|++||........+
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------------~g~i~vvd~~~~~~l~~ 317 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------------TGKVLLVNYKDIDNLTV 317 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEECTTSSSCEE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------------CCeEEEEEecCCCccee
Confidence 667776 65432 2221 1 145678899999988877632 45899999875332111
Q ss_pred ccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE-EEeec--ccc
Q 002164 382 CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLD--LRY 458 (958)
Q Consensus 382 ~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~-l~~~~--~~~ 458 (958)
+..+. ...+..+.|+|||++++... ...+.|.+||. ..++... +.... ...
T Consensus 318 ~~i~~-----------~~~~~~~~~spdg~~l~va~------------~~~~~v~v~D~---~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 318 TSIGA-----------APFLHDGGWDSSHRYFMTAA------------NNSNKVAVIDS---KDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp EEEEC-----------CSSCCCEEECTTSCEEEEEE------------GGGTEEEEEET---TTTEEEEEEECSSSBCCT
T ss_pred EEecc-----------CcCccCceECCCCCEEEEEe------------cCCCeEEEEEC---CCCeEEEeeccCCCCCCC
Confidence 11111 13456789999999876631 23557888996 4444333 32111 111
Q ss_pred Ccee-eecCCceEEEEEeccccceEEEEEcCCCCC-----CCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeecc
Q 002164 459 GGIS-WCDDSLALVYESWYKTRRTRTWVISPGSKD-----VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKEN 532 (958)
Q Consensus 459 ~~~~-~spDg~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~ 532 (958)
.... ++|++..++.+...+.+ .|.++++++.. .+............. .+.++|||++|+.....
T Consensus 372 ~g~~~~~p~~g~~~~s~~~~d~--~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~------~v~~~pdg~~l~v~~~~-- 441 (543)
T 1nir_A 372 RGANFVHPKYGPVWSTSHLGDG--SISLIGTDPKNHPQYAWKKVAELQGQGGGSL------FIKTHPKSSHLYVDTTF-- 441 (543)
T ss_dssp TCEEEEETTTEEEEEEEBSSSS--EEEEEECCTTTCTTTBTSEEEEEECSCSCCC------CEECCTTCCEEEECCTT--
T ss_pred CCcccCCCCCccEEEeccCCCc--eEEEEEeCCCCCchhcCeEEEEEEcCCCCce------EEEcCCCCCcEEEecCC--
Confidence 2333 46887776665443322 34455554411 122222222222212 27899999998865410
Q ss_pred CCCcEEEEccCCCCCC-CCCCeEEEEECCCCceE-EEec-------CCcccccceeEeecCCCccccccccCCEEEEEEe
Q 002164 533 DEGTYILLNGNGATPE-GNIPFLDLFDINTGSKE-RIWE-------SDKEKYYETTVALMSDQTEGDLYLNQLKILTSKE 603 (958)
Q Consensus 533 ~~~~~~~~~~~~~~~~-~~~~~L~~~dl~~g~~~-~l~~-------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 603 (958)
.+. .....|.+||+++++.. .+.. .++. ..+. .+.|++||+++++...
T Consensus 442 -------------~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~---~~~~-------~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 442 -------------NPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA---KRVV-------QPEYNKRGDEVWFSVW 498 (543)
T ss_dssp -------------CSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC---CEEE-------EEEECSSSSEEEEEEE
T ss_pred -------------CCCcccCceEEEEECCCCCCCeEEeechhhcccCCCC---CceE-------eccCCCCCCEEEEEee
Confidence 000 00236999999988754 3321 0100 0112 2579999999999876
Q ss_pred cC-CCCceEEEEECCCCCeeE
Q 002164 604 SK-TENTQYYIQSWPDKKSCQ 623 (958)
Q Consensus 604 s~-~~p~~~~~~d~~~g~~~~ 623 (958)
+. .....|.++|..+++.+.
T Consensus 499 ~~~~~~~~i~v~D~~t~~~~~ 519 (543)
T 1nir_A 499 NGKNDSSALVVVDDKTLKLKA 519 (543)
T ss_dssp CCTTSCCEEEEEETTTTEEEE
T ss_pred cCCCCCCeEEEEECCCceEEE
Confidence 54 446789999998887654
No 175
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.64 E-value=2.7e-16 Score=159.53 Aligned_cols=189 Identities=15% Similarity=0.130 Sum_probs=131.4
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcH-HHHHHHHCCcEEEEcCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGST-SVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
+|.++++..+.|++ ..+.|+||++||+..... .| ... ....|+++||.|+.+ +.+|+
T Consensus 15 ~g~~l~~~~~~p~~-----~~~~~~vv~~hG~~~~~~-----------~~---~~~~~~~~l~~~G~~v~~~---d~~g~ 72 (210)
T 1imj_A 15 QGQALFFREALPGS-----GQARFSVLLLHGIRFSSE-----------TW---QNLGTLHRLAQAGYRAVAI---DLPGL 72 (210)
T ss_dssp TTEEECEEEEECSS-----SCCSCEEEECCCTTCCHH-----------HH---HHHTHHHHHHHTTCEEEEE---CCTTS
T ss_pred CCeEEEEEEeCCCC-----CCCCceEEEECCCCCccc-----------ee---ecchhHHHHHHCCCeEEEe---cCCCC
Confidence 89999999999864 123799999999642110 11 111 366788999999994 45566
Q ss_pred CCcccch--hhHHHHH--HHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCC
Q 002164 727 GDEEAND--RFVEQLV--ACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG 802 (958)
Q Consensus 727 G~~~~~~--~~~~~~~--~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~ 802 (958)
|.+.... ....... .++..+++.+ +.++++++|||+||.+++.++.++|++++++|+.+|......
T Consensus 73 g~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~---- 142 (210)
T 1imj_A 73 GHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI---- 142 (210)
T ss_dssp GGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS----
T ss_pred CCCCCCCCcchhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc----
Confidence 6654322 1112222 4555555543 346899999999999999999999999999999988643110
Q ss_pred cccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCccc
Q 002164 803 FQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARES 882 (958)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~ 882 (958)
....+.++++|+|+++|++|. ++ .+..+++ +.+ ...++.++++++|.+. .+.
T Consensus 143 -------------------~~~~~~~~~~p~l~i~g~~D~-~~--~~~~~~~-~~~----~~~~~~~~~~~~H~~~-~~~ 194 (210)
T 1imj_A 143 -------------------NAANYASVKTPALIVYGDQDP-MG--QTSFEHL-KQL----PNHRVLIMKGAGHPCY-LDK 194 (210)
T ss_dssp -------------------CHHHHHTCCSCEEEEEETTCH-HH--HHHHHHH-TTS----SSEEEEEETTCCTTHH-HHC
T ss_pred -------------------cchhhhhCCCCEEEEEcCccc-CC--HHHHHHH-hhC----CCCCEEEecCCCcchh-hcC
Confidence 112234568999999999999 87 7766665 433 3579999999999863 344
Q ss_pred HHHHHHHHHHHHHH
Q 002164 883 IMHVLWETDRWLQK 896 (958)
Q Consensus 883 ~~~~~~~i~~fl~~ 896 (958)
...+.+.+.+||++
T Consensus 195 ~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 195 PEEWHTGLLDFLQG 208 (210)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 56677788888865
No 176
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.64 E-value=1.2e-14 Score=161.42 Aligned_cols=202 Identities=10% Similarity=0.064 Sum_probs=135.0
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+...+|||||++|+... ++....|.+||+.+++.......... +..++|||||++|+...
T Consensus 135 ~~~~v~fSpDg~~la~as-------~~~d~~i~iwd~~~~~~~~~~~~~~~-----V~~v~fspdg~~l~s~s------- 195 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIAS-------SKVPAIMRIIDPSDLTEKFEIETRGE-----VKDLHFSTDGKVVAYIT------- 195 (365)
T ss_dssp CEEEEEECTTSSCEEEEE-------SCSSCEEEEEETTTTEEEEEEECSSC-----CCEEEECTTSSEEEEEC-------
T ss_pred CEEEEEEcCCCCEEEEEE-------CCCCCEEEEeECCCCcEEEEeCCCCc-----eEEEEEccCCceEEecc-------
Confidence 355689999999998865 23356899999999887655443332 77999999999999771
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-e-cCC-C-ccccccccCCCCc
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-E-IGP-P-AVYTSLDPSPDEK 344 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~-l~~-~-~~~~~~~~SpDGk 344 (958)
...+.+++. +|... . ... . ..+..++|||||+
T Consensus 196 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 196 -------------------------------------------GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp -------------------------------------------SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred -------------------------------------------ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 123556666 55322 2 222 2 5678899999999
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
.++..+.+.. ....+++|++.......+..... .+....+..++|||||+.|+.-
T Consensus 233 ~l~~~s~d~~---------~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~V~~~~~Spdg~~lasg-------- 287 (365)
T 4h5i_A 233 VLIAASLKKG---------KGIVLTKISIKSGNTSVLRSKQV--------TNRFKGITSMDVDMKGELAVLA-------- 287 (365)
T ss_dssp EEEEEEESSS---------CCEEEEEEEEETTEEEEEEEEEE--------ESSCSCEEEEEECTTSCEEEEE--------
T ss_pred EEEEEecCCc---------ceeEEeecccccceecceeeeee--------cCCCCCeEeEEECCCCCceEEE--------
Confidence 9998875432 12257778877544332211110 0111345789999999988773
Q ss_pred cccccccCCeEEEEeCCCCCCCC-ceEE-EeeccccCceeeecCCceEEEEEeccccceEEEEEcC
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEG-PEIL-HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~-~~~l-~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
+..+.|.+||+ ..++ ...+ ..+...+..++|||||++|+..+.+++ .+||.+..
T Consensus 288 -----s~D~~V~iwd~---~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t--vrvw~ip~ 343 (365)
T 4h5i_A 288 -----SNDNSIALVKL---KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT--IHIIKLPL 343 (365)
T ss_dssp -----ETTSCEEEEET---TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE--EEEEECCT
T ss_pred -----cCCCEEEEEEC---CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe--EEEEEcCC
Confidence 44567999996 3333 3333 345667889999999999998876665 67776643
No 177
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.64 E-value=1.1e-13 Score=150.02 Aligned_cols=267 Identities=15% Similarity=0.135 Sum_probs=172.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++|+....+ +.|.+|++.. + .....+.+ +..
T Consensus 25 ~v~~~~~s~~~~~l~s~~~d---------------------------------g~i~iw~~~~-~--~~~~~~~~--h~~ 66 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSAD---------------------------------KLIKIWGAYD-G--KFEKTISG--HKL 66 (312)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEETTT-C--CEEEEECC--CSS
T ss_pred cEEEEEECCCCCEEEEeeCC---------------------------------CeEEEEeCCC-c--ccchhhcc--CCC
Confidence 46688999999999988765 4789999854 2 23344443 234
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+....|+|||+.|+.... ...|.+|++.+++........... +..++|+|+++.|+...
T Consensus 67 ~v~~~~~~~~~~~l~s~~~---------d~~i~vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~~------- 126 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASD---------DKTLKIWDVSSGKCLKTLKGHSNY----VFCCNFNPQSNLIVSGS------- 126 (312)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred ceEEEEEcCCCCEEEEECC---------CCEEEEEECCCCcEEEEEcCCCCC----EEEEEEcCCCCEEEEEe-------
Confidence 6889999999999988652 568999999988765443333322 67889999999988761
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCCC-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~SpDGk~l 346 (958)
....|.++++ +++ ...+... ..+..+.|+|||+.|
T Consensus 127 ------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 127 ------------------------------------------FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp ------------------------------------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ------------------------------------------CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE
Confidence 2245778888 664 3444444 667889999999999
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 425 (958)
+..+.+ +.+.+||+..+.. +.+.... ...+..+.|+|||+.++..
T Consensus 165 ~~~~~d-------------~~i~~wd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~--------- 210 (312)
T 4ery_A 165 VSSSYD-------------GLCRIWDTASGQCLKTLIDDD------------NPPVSFVKFSPNGKYILAA--------- 210 (312)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEECCSS------------CCCEEEEEECTTSSEEEEE---------
T ss_pred EEEeCC-------------CcEEEEECCCCceeeEEeccC------------CCceEEEEECCCCCEEEEE---------
Confidence 877633 4899999985543 3332211 0234568999999987763
Q ss_pred ccccccCCeEEEEeCCCCCCCCceEEEeeccc--cCceeee-cCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccC
Q 002164 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLR--YGGISWC-DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (958)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~--~~~~~~s-pDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 502 (958)
+..+.|.+|++ ..+.....+...... .....|+ ++++.|+....++ .|+++++.++ +........
T Consensus 211 ----~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~vwd~~~~--~~~~~~~~h 278 (312)
T 4ery_A 211 ----TLDNTLKLWDY--SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN----LVYIWNLQTK--EIVQKLQGH 278 (312)
T ss_dssp ----ETTTEEEEEET--TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS----CEEEEETTTC--CEEEEECCC
T ss_pred ----cCCCeEEEEEC--CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC----EEEEEECCCc--hhhhhhhcc
Confidence 44567899996 222222233222221 1233455 4566665543332 3555566653 333334444
Q ss_pred CccccCCCCCCceEeccCCceEEEEe
Q 002164 503 SEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
...+.. ++|+|++..++...
T Consensus 279 ~~~v~~------~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 279 TDVVIS------TACHPTENIIASAA 298 (312)
T ss_dssp SSCEEE------EEECSSSSEEEEEE
T ss_pred CCcEEE------EeecCcCCceEEEE
Confidence 444443 78999999888765
No 178
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.64 E-value=4e-15 Score=159.12 Aligned_cols=214 Identities=16% Similarity=0.112 Sum_probs=140.2
Q ss_pred EEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCC
Q 002164 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (958)
Q Consensus 642 ~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~ 721 (958)
..+...+|.+++...+-|++ .|.||++||.+..... .| ...+..| +.||.|++ .
T Consensus 5 ~~~~~~~g~~l~~~~~G~~~--------~~~vvllHG~~~~~~~----------~w----~~~~~~L-~~~~~vi~---~ 58 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGPVE--------GPALFVLHGGPGGNAY----------VL----REGLQDY-LEGFRVVY---F 58 (286)
T ss_dssp EEEEECSSCEEEEEEESCTT--------SCEEEEECCTTTCCSH----------HH----HHHHGGG-CTTSEEEE---E
T ss_pred eeEEeECCEEEEEEeecCCC--------CCEEEEECCCCCcchh----------HH----HHHHHHh-cCCCEEEE---E
Confidence 34555688999877765421 4679999996422110 11 1223334 56999999 6
Q ss_pred CCCCCCCccc-ch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC
Q 002164 722 PIIGEGDEEA-ND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (958)
Q Consensus 722 ~~~G~G~~~~-~~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (958)
|.+|+|.+.. .. .......+|+.+.++.+ +.+++.|+||||||.+|+.+|.++|+ ++++|++++....
T Consensus 59 Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~ 131 (286)
T 2yys_A 59 DQRGSGRSLELPQDPRLFTVDALVEDTLLLAEAL------GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNF 131 (286)
T ss_dssp CCTTSTTSCCCCSCGGGCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBH
T ss_pred CCCCCCCCCCCccCcccCcHHHHHHHHHHHHHHh------CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCc
Confidence 6678888765 32 23556677777776664 23589999999999999999999999 9999999875421
Q ss_pred CC-C-CC--------------Cccc----cc-----c------hhh-hc----------------HHH--H---HhcCcc
Q 002164 797 TL-T-PF--------------GFQN----ED-----R------TLW-EA----------------TST--Y---VEMSPF 823 (958)
Q Consensus 797 ~~-~-~~--------------~~~~----~~-----~------~~~-~~----------------~~~--~---~~~sp~ 823 (958)
.. . .. .+.. .. . ..+ .. ... + ...+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (286)
T 2yys_A 132 PWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYT 211 (286)
T ss_dssp HHHHHHHHHHTTCCCCSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCG
T ss_pred HHHHHHHHHHhccccchhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChh
Confidence 00 0 00 0000 00 0 000 00 000 0 011222
Q ss_pred cccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
..+.++++|+|+++|++|..+| +. ++++.+ +.. .+++++|++||... .+....+.+.+.+||.+.
T Consensus 212 ~~l~~i~~P~lvi~G~~D~~~~--~~-~~~~~~-~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 212 PYLTPERRPLYVLVGERDGTSY--PY-AEEVAS-RLR----APIRVLPEAGHYLW-IDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp GGCCCCSSCEEEEEETTCTTTT--TT-HHHHHH-HHT----CCEEEETTCCSSHH-HHCHHHHHHHHHHHHHTT
T ss_pred hhhhhcCCCEEEEEeCCCCcCC--Hh-HHHHHh-CCC----CCEEEeCCCCCCcC-hhhHHHHHHHHHHHHHhh
Confidence 3467789999999999999998 78 888888 765 47889999999874 455678889999999763
No 179
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.64 E-value=3.1e-15 Score=159.37 Aligned_cols=235 Identities=13% Similarity=0.089 Sum_probs=147.5
Q ss_pred cEEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEE
Q 002164 638 QKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAIL 716 (958)
Q Consensus 638 ~~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl 716 (958)
+.+.+++.+. .|.++..+ +|+++ + |+||++||++.. .+...|.... .....++++||+|+
T Consensus 5 ~~~~~~~~s~~~~~~~~v~--~~p~~------~-~~v~llHG~~~~---------~~~~~w~~~~-~~~~~l~~~~~~vv 65 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQ--FQGGG------P-HAVYLLDGLRAQ---------DDYNGWDINT-PAFEEYYQSGLSVI 65 (280)
T ss_dssp CEEEEEEEETTTTEEEEEE--EECCS------S-SEEEECCCTTCC---------SSSCHHHHHS-CHHHHHTTSSSEEE
T ss_pred eEEEEEEECcccCceeEEE--EcCCC------C-CEEEEECCCCCC---------CCcccccccC-cHHHHHhcCCeEEE
Confidence 4566677655 46666655 45443 1 488999996310 0001111000 12345677899999
Q ss_pred EcCCCCCCCCCCccc---------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEE
Q 002164 717 GGPTTPIIGEGDEEA---------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCG 787 (958)
Q Consensus 717 ~~~~~~~~G~G~~~~---------~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~ 787 (958)
.++..+..++..... ...+.....+|+. .++.++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 66 ~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~---~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 142 (280)
T 1dqz_A 66 MPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMP---AWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYA 142 (280)
T ss_dssp EECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHH---HHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEE
T ss_pred EECCCCCccccCCCCCCccccccccccHHHHHHHHHH---HHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEE
Confidence 987654333321100 1122222234444 4444433467789999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCC-cc---------cccchhhhc--HHHHHhcCcccccCCC---CCCEEEEeeCCCC----------
Q 002164 788 IARSGAYNRTLTPFG-FQ---------NEDRTLWEA--TSTYVEMSPFMSANKL---KKPILLVHGEEDN---------- 842 (958)
Q Consensus 788 v~~~~~~~~~~~~~~-~~---------~~~~~~~~~--~~~~~~~sp~~~~~~~---~~P~Lii~G~~D~---------- 842 (958)
|+++|.++....... +. ......|.. ...+...+|...+.++ ++|+++.||+.|.
T Consensus 143 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~ 222 (280)
T 1dqz_A 143 ASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPA 222 (280)
T ss_dssp EEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHH
T ss_pred EEecCcccccCcchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccch
Confidence 999998764321000 00 000011111 1245666777665554 5899999999997
Q ss_pred ----CCCCChHHHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 843 ----NSGTLTMQSDRFFNALKGHG-ALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 843 ----~v~~~~~~~~~~~~~l~~~g-~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
.++ ..++++++++|+..| +++++.++++++|.+. .....+...+.||.+.|+
T Consensus 223 ~~~e~~~--~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 223 KFLEGLT--LRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP---YWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHH
T ss_pred hhHHHHH--HHHHHHHHHHHHhCCCCceEEEecCCCccChH---HHHHHHHHHHHHHHHHhC
Confidence 456 788999999999999 9999999998899862 234456677788877664
No 180
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.64 E-value=3.7e-15 Score=160.83 Aligned_cols=213 Identities=13% Similarity=0.106 Sum_probs=140.6
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G 727 (958)
+|..++....-+ .|+||++||.+.... .|. ..+..|+++||.|++ .+.+|+|
T Consensus 17 ~g~~l~~~~~g~----------~~~vv~~HG~~~~~~-----------~~~----~~~~~l~~~g~~v~~---~d~~G~G 68 (309)
T 3u1t_A 17 EGATIAYVDEGS----------GQPVLFLHGNPTSSY-----------LWR----NIIPYVVAAGYRAVA---PDLIGMG 68 (309)
T ss_dssp TTEEEEEEEEEC----------SSEEEEECCTTCCGG-----------GGT----TTHHHHHHTTCEEEE---ECCTTST
T ss_pred CCeEEEEEEcCC----------CCEEEEECCCcchhh-----------hHH----HHHHHHHhCCCEEEE---EccCCCC
Confidence 788887655421 468999999642211 111 234566889999999 5556777
Q ss_pred Ccccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCccc
Q 002164 728 DEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQN 805 (958)
Q Consensus 728 ~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~ 805 (958)
.+.... .......+|+.++++.+ +.+++.|+|||+||.+++.++.++|++++++|++++..........+..
T Consensus 69 ~S~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 142 (309)
T 3u1t_A 69 DSAKPDIEYRLQDHVAYMDGFIDAL------GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEA 142 (309)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHH------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGG
T ss_pred CCCCCCcccCHHHHHHHHHHHHHHc------CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccc
Confidence 775432 23456667777666654 2358999999999999999999999999999999876542210000000
Q ss_pred --------------c----------------------c-chh-hhcHHHHHh-----------------c----------
Q 002164 806 --------------E----------------------D-RTL-WEATSTYVE-----------------M---------- 820 (958)
Q Consensus 806 --------------~----------------------~-~~~-~~~~~~~~~-----------------~---------- 820 (958)
. . ... ......+.. .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
T 3u1t_A 143 MGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAE 222 (309)
T ss_dssp GHHHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHH
T ss_pred cchhhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhh
Confidence 0 0 000 000000000 0
Q ss_pred ----CcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 821 ----SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 821 ----sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
+....+.++++|+|+++|++|..+| +....++.+.+.. .+++.++++||... .+....+.+.|.+||++
T Consensus 223 ~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 295 (309)
T 3u1t_A 223 AEVLKNGEWLMASPIPKLLFHAEPGALAP--KPVVDYLSENVPN----LEVRFVGAGTHFLQ-EDHPHLIGQGIADWLRR 295 (309)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHSTT----EEEEEEEEESSCHH-HHCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCEEEEecCCCCCCC--HHHHHHHHhhCCC----CEEEEecCCcccch-hhCHHHHHHHHHHHHHh
Confidence 0112245678999999999999998 8888888877644 57777899999763 45678888999999999
Q ss_pred hhccC
Q 002164 897 YCVSN 901 (958)
Q Consensus 897 ~l~~~ 901 (958)
.....
T Consensus 296 ~~~~~ 300 (309)
T 3u1t_A 296 NKPHA 300 (309)
T ss_dssp HCCCC
T ss_pred cchhh
Confidence 87544
No 181
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.7e-14 Score=163.34 Aligned_cols=269 Identities=10% Similarity=0.102 Sum_probs=171.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++|+....+ +.|.+|+.. + .....+.. +..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~i~~~~--~--~~~~~~~~--~~~ 150 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN---------------------------------GELRLWNKT--G--ALLNVLNF--HRA 150 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEETT--S--CEEEEECC--CCS
T ss_pred ceEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEeCC--C--CeeeeccC--CCc
Confidence 56788999999999988765 478899852 2 44455543 335
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc-----------cccccceEEecCCeEE
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL-----------NAIFDNFVWVNNSTLL 258 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~-----------~~~~~~~~wspDG~~l 258 (958)
.+..+.|+|||+.|+.... ...|.+|++.+++............ ...+..+.|+|++..+
T Consensus 151 ~v~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDV---------ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFV 221 (425)
T ss_dssp CEEEEEECTTSSEEEEEET---------TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEE
T ss_pred cEEEEEECCCCCEEEEEec---------CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEE
Confidence 7899999999999988652 5678999998877655433222110 0004578899998744
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-cccc
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYT 335 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~ 335 (958)
+.. ....|+++++ +++. ..+... ..+.
T Consensus 222 ~~~--------------------------------------------------~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 222 IPG--------------------------------------------------PKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp EEC--------------------------------------------------GGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred EEc--------------------------------------------------CCCeEEEEEcCCCceeeeeccCCCceE
Confidence 432 2356888888 6643 334333 6788
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCce
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~ 414 (958)
.++|+|||+.|+....+ +.+.+||+..+.. ..+..+ ...+..+.|+||| .++
T Consensus 252 ~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDD-------------GTLRIWHGGNGNSQNCFYGH-------------SQSIVSASWVGDD-KVI 304 (425)
T ss_dssp EEEEETTTTEEEEEETT-------------SCEEEECSSSBSCSEEECCC-------------SSCEEEEEEETTT-EEE
T ss_pred EEEECCCCCEEEEEcCC-------------CEEEEEECCCCccceEecCC-------------CccEEEEEECCCC-EEE
Confidence 99999999988887633 4899999885433 222211 1345789999999 443
Q ss_pred EEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCC-
Q 002164 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDV- 493 (958)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~- 493 (958)
.. +..+.|++|++ ..+.....+......+..+.|+|||+.|+.....+. ..+| ++..+..
T Consensus 305 ~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--i~i~--~~~~~~~~ 365 (425)
T 1r5m_A 305 SC-------------SMDGSVRLWSL--KQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ--VNVY--DLKKLNSK 365 (425)
T ss_dssp EE-------------ETTSEEEEEET--TTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC--EEEE--ECHHHHC-
T ss_pred EE-------------eCCCcEEEEEC--CCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe--EEEE--ECCCCccc
Confidence 32 34568999996 233223333444566788999999998887764332 4455 4433210
Q ss_pred -----------------CcEEEeccCCc--cccCCCCCCceEeccCCceEEEEe
Q 002164 494 -----------------APRILFDRSSE--DVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 494 -----------------~~~~~~~~~~~--~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
........... .+.. ++|+|||++|+...
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 366 SRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFD------LSWNCAGNKISVAY 413 (425)
T ss_dssp -------------CEECCEEEEECCTTCCCCEEE------EEECTTSSEEEEEE
T ss_pred eeeeecccccccCcccchhhhhhcCcccCCceEE------EEccCCCceEEEEe
Confidence 01222222211 3333 78999999888776
No 182
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.64 E-value=6.8e-15 Score=152.23 Aligned_cols=132 Identities=15% Similarity=0.145 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHh
Q 002164 740 VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVE 819 (958)
Q Consensus 740 ~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (958)
...+...++...+. .+|++||+++|+|+||++|+.++.+.|+.++++|+.+|..... ..+.
T Consensus 114 ~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~-----------------~~~~- 174 (246)
T 4f21_A 114 IAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAW-----------------DNFK- 174 (246)
T ss_dssp HHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTH-----------------HHHS-
T ss_pred HHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcc-----------------cccc-
Confidence 33344444444444 4899999999999999999999999999999999999853200 0000
Q ss_pred cCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 820 MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 820 ~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
........++|+|++||++|++|| ++.++++++.|+..|.++++..||+.||.+. .+.++.+.+||.+.|+
T Consensus 175 --~~~~~~~~~~Pvl~~HG~~D~vVp--~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 175 --GKITSINKGLPILVCHGTDDQVLP--EVLGHDLSDKLKVSGFANEYKHYVGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp --TTCCGGGTTCCEEEEEETTCSSSC--HHHHHHHHHHHHTTTCCEEEEEESSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred --ccccccccCCchhhcccCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 000011235899999999999999 9999999999999999999999999999985 3346789999999874
No 183
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.63 E-value=4.4e-15 Score=157.91 Aligned_cols=201 Identities=13% Similarity=0.135 Sum_probs=129.5
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.++++..+.|++ .|+||++||.+.... .| ......|+++||.|++ .+.+|+
T Consensus 11 ~~g~~l~~~~~g~~~--------~~~vv~~hG~~~~~~-----------~~----~~~~~~l~~~G~~v~~---~d~~G~ 64 (286)
T 3qit_A 11 FGGNQICLCSWGSPE--------HPVVLCIHGILEQGL-----------AW----QEVALPLAAQGYRVVA---PDLFGH 64 (286)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCCGG-----------GG----HHHHHHHHHTTCEEEE---ECCTTS
T ss_pred cCCceEEEeecCCCC--------CCEEEEECCCCcccc-----------hH----HHHHHHhhhcCeEEEE---ECCCCC
Confidence 488999988885432 578999999642211 11 2456788999999999 555677
Q ss_pred CCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC-C
Q 002164 727 GDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-F 801 (958)
Q Consensus 727 G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~ 801 (958)
|.+.... .......+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++........ .
T Consensus 65 G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 138 (286)
T 3qit_A 65 GRSSHLEMVTSYSSLTFLAQIDRVIQEL------PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKE 138 (286)
T ss_dssp TTSCCCSSGGGCSHHHHHHHHHHHHHHS------CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---C
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHhc------CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccch
Confidence 7765432 22344455555554432 34689999999999999999999999999999999875532211 0
Q ss_pred C--------------------cccccc---------hhhhc--HHHH---------------------------------
Q 002164 802 G--------------------FQNEDR---------TLWEA--TSTY--------------------------------- 817 (958)
Q Consensus 802 ~--------------------~~~~~~---------~~~~~--~~~~--------------------------------- 817 (958)
. +..... ..+.. ...+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T 3qit_A 139 SAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPG 218 (286)
T ss_dssp CHHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTT
T ss_pred hhhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhcccccccccccc
Confidence 0 000000 00000 0000
Q ss_pred HhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHH
Q 002164 818 VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVL 887 (958)
Q Consensus 818 ~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~ 887 (958)
...+....+.++++|+|+++|++|..+| ++...++.+.+.. ++++++++ ||... .++...+.
T Consensus 219 ~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~----~~~~~~~g-gH~~~-~e~p~~~~ 280 (286)
T 3qit_A 219 GRSQYLEMLKSIQVPTTLVYGDSSKLNR--PEDLQQQKMTMTQ----AKRVFLSG-GHNLH-IDAAAALA 280 (286)
T ss_dssp HHHHHHHHHHHCCSCEEEEEETTCCSSC--HHHHHHHHHHSTT----SEEEEESS-SSCHH-HHTHHHHH
T ss_pred chhHHHHHHhccCCCeEEEEeCCCcccC--HHHHHHHHHHCCC----CeEEEeeC-CchHh-hhChHHHH
Confidence 1111222345689999999999999998 8888887776643 48999999 99863 33333333
No 184
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.63 E-value=4.3e-14 Score=153.70 Aligned_cols=273 Identities=10% Similarity=0.064 Sum_probs=169.4
Q ss_pred CCCCceecCCC-CEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCC--CceeeeccCC
Q 002164 110 PLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL--GQEIEIQGFP 186 (958)
Q Consensus 110 ~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~--~~~~~lt~~~ 186 (958)
.+..++|||++ +.|+..+.+ +.|.+|++..+... ...+.+.++
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D---------------------------------~~v~~W~~~~~~~~~~~~~~~~~~h- 64 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRD---------------------------------KTLISWKLTGDDQKFGVPVRSFKGH- 64 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETT---------------------------------SEEEEEEEEEETTEEEEEEEEEECC-
T ss_pred eEEEEEccCCCccEEEEecCC---------------------------------ccEEEecCCCCCccccccceEEeCC-
Confidence 46678899976 677776665 47889988542110 112334443
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCC
Q 002164 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (958)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (958)
...+....|+|||++|+.... ...|.+||+.+++..+........ +..++|+|+++.|+...
T Consensus 65 -~~~v~~~~~s~dg~~l~s~s~---------D~~v~~wd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s---- 126 (319)
T 3frx_A 65 -SHIVQDCTLTADGAYALSASW---------DKTLRLWDVATGETYQRFVGHKSD----VMSVDIDKKASMIISGS---- 126 (319)
T ss_dssp -SSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSCEEEEEE----
T ss_pred -cccEEEEEECCCCCEEEEEeC---------CCEEEEEECCCCCeeEEEccCCCc----EEEEEEcCCCCEEEEEe----
Confidence 346888999999999988652 568999999988765443333322 77899999999988762
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCCCC-
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDE- 343 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDG- 343 (958)
....|.++++ +.....+... ..+..+.|+|++
T Consensus 127 ---------------------------------------------~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 127 ---------------------------------------------RDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp ---------------------------------------------TTSCEEEEETTSCEEEEECCCSSCEEEEEECCC--
T ss_pred ---------------------------------------------CCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCC
Confidence 1234666677 4444455444 667778888854
Q ss_pred -----cEEEEEeecCCccccccCCCCCceeEEEeccCceEEE-eccCCccccCcccccccccCcceeeeecCCCCceEEE
Q 002164 344 -----KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (958)
Q Consensus 344 -----k~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~ 417 (958)
..|+..+. ++.|.+||+....... +..+ ...+..+.|+|||+.|+..
T Consensus 162 ~~~~~~~l~s~~~-------------d~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~sp~g~~l~s~- 214 (319)
T 3frx_A 162 ADDDSVTIISAGN-------------DKMVKAWNLNQFQIEADFIGH-------------NSNINTLTASPDGTLIASA- 214 (319)
T ss_dssp ----CCEEEEEET-------------TSCEEEEETTTTEEEEEECCC-------------CSCEEEEEECTTSSEEEEE-
T ss_pred CCCCccEEEEEeC-------------CCEEEEEECCcchhheeecCC-------------CCcEEEEEEcCCCCEEEEE-
Confidence 35665553 3489999998654332 2221 1345789999999987763
Q ss_pred EeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002164 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (958)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 497 (958)
+..+.|.+|++ ..++..........+..++|+|||+.|+..... + .++|.++... ...
T Consensus 215 ------------~~dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~--i~v~~~~~~~----~~~ 272 (319)
T 3frx_A 215 ------------GKDGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-G--IKVFSLDPQY----LVD 272 (319)
T ss_dssp ------------ETTCEEEEEET---TTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-E--EEEEEETTEE----EEE
T ss_pred ------------eCCCeEEEEEC---CCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-C--cEEEEeCcCe----eee
Confidence 45668999996 433332222334567789999999988876532 2 5666665321 111
Q ss_pred EeccCCcccc--CCCCCCceEeccCCceEEEEe
Q 002164 498 LFDRSSEDVY--SDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 498 ~~~~~~~~~~--~~~~~~~~~~spdG~~l~~~~ 528 (958)
.......... .......++|||||++|+...
T Consensus 273 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred ccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 1111000000 000111278999999998776
No 185
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.63 E-value=1.5e-14 Score=154.27 Aligned_cols=210 Identities=11% Similarity=0.124 Sum_probs=131.3
Q ss_pred EeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCC
Q 002164 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (958)
Q Consensus 645 ~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~ 724 (958)
...+|.+++.... + . -|.||++||.+.... .|. .....|+++||.|++ +|.+
T Consensus 12 ~~~~g~~l~y~~~---G----~---g~~vvllHG~~~~~~-----------~w~----~~~~~l~~~g~~vi~---~D~~ 63 (281)
T 3fob_A 12 ENQAPIEIYYEDH---G----T---GKPVVLIHGWPLSGR-----------SWE----YQVPALVEAGYRVIT---YDRR 63 (281)
T ss_dssp ETTEEEEEEEEEE---S----S---SEEEEEECCTTCCGG-----------GGT----TTHHHHHHTTEEEEE---ECCT
T ss_pred CCCCceEEEEEEC---C----C---CCeEEEECCCCCcHH-----------HHH----HHHHHHHhCCCEEEE---eCCC
Confidence 3456677765443 1 1 356788999753211 111 124578889999999 6667
Q ss_pred CCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEeccCCCCCCC--
Q 002164 725 GEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRTLT-- 799 (958)
Q Consensus 725 G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~~~~~~-- 799 (958)
|+|.+..+. .......+|+.+.++.+ +.+++.|+||||||.+++.+++. .|++++++|+.++.......
T Consensus 64 G~G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 137 (281)
T 3fob_A 64 GFGKSSQPWEGYEYDTFTSDLHQLLEQL------ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSE 137 (281)
T ss_dssp TSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCS
T ss_pred CCCCCCCCccccCHHHHHHHHHHHHHHc------CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccc
Confidence 888875432 22456667777766654 23589999999999877766555 58999999988764221100
Q ss_pred --CCCccc-c------------------------------cc--------hhhh------------cHHHHHhcCccccc
Q 002164 800 --PFGFQN-E------------------------------DR--------TLWE------------ATSTYVEMSPFMSA 826 (958)
Q Consensus 800 --~~~~~~-~------------------------------~~--------~~~~------------~~~~~~~~sp~~~~ 826 (958)
+..... . .. ..|. ....+...+....+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l 217 (281)
T 3fob_A 138 DHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDL 217 (281)
T ss_dssp SSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred cccccccchhHHHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhh
Confidence 000000 0 00 0000 00011122333456
Q ss_pred CCCCCCEEEEeeCCCCCCCCChHHHHH-HHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 827 NKLKKPILLVHGEEDNNSGTLTMQSDR-FFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~~~~~~-~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
.++++|+|++||++|..+| ++.+.+ +.+.+. ..++++++++||... .+....+.+.+.+||.
T Consensus 218 ~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~p----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 218 EKFNIPTLIIHGDSDATVP--FEYSGKLTHEAIP----NSKVALIKGGPHGLN-ATHAKEFNEALLLFLK 280 (281)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHST----TCEEEEETTCCTTHH-HHTHHHHHHHHHHHHC
T ss_pred hhcCCCEEEEecCCCCCcC--HHHHHHHHHHhCC----CceEEEeCCCCCchh-hhhHHHHHHHHHHHhh
Confidence 7899999999999999998 776644 434433 358999999999873 5667788888888874
No 186
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.63 E-value=2e-14 Score=152.45 Aligned_cols=213 Identities=14% Similarity=0.142 Sum_probs=135.0
Q ss_pred EEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCC
Q 002164 644 YQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI 723 (958)
Q Consensus 644 ~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~ 723 (958)
+++.+|.+++...+- + .|.||++||.+.... .| ...+..|+++||.|++ .|.
T Consensus 3 ~~~~~g~~l~y~~~g--------~--g~~vvllHG~~~~~~-----------~w----~~~~~~l~~~g~~vi~---~D~ 54 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG--------Q--GRPVVFIHGWPLNGD-----------AW----QDQLKAVVDAGYRGIA---HDR 54 (274)
T ss_dssp EECTTSCEEEEEEEC--------S--SSEEEEECCTTCCGG-----------GG----HHHHHHHHHTTCEEEE---ECC
T ss_pred EEccCCCEEEEEecC--------C--CceEEEECCCcchHH-----------HH----HHHHHHHHhCCCeEEE---EcC
Confidence 566788888765441 1 356899999642211 11 2345678889999999 666
Q ss_pred CCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEeccCCCCCC--
Q 002164 724 IGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTL-- 798 (958)
Q Consensus 724 ~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~-- 798 (958)
+|+|.+.... .......+|+.+.++.+ +.+++.++||||||.+++.+++++ |++++++|++++......
T Consensus 55 ~G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~ 128 (274)
T 1a8q_A 55 RGHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKS 128 (274)
T ss_dssp TTSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCC
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccccc
Confidence 7888775431 23456677777776654 335899999999999999877765 899999999886421100
Q ss_pred --CCCCcccc---------------------------c-----------chhhhc-----H-------HHHHhcCccccc
Q 002164 799 --TPFGFQNE---------------------------D-----------RTLWEA-----T-------STYVEMSPFMSA 826 (958)
Q Consensus 799 --~~~~~~~~---------------------------~-----------~~~~~~-----~-------~~~~~~sp~~~~ 826 (958)
.+...... . ...|.. . ..+...+....+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (274)
T 1a8q_A 129 DKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDL 208 (274)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHH
T ss_pred ccCcccchHHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHh
Confidence 00000000 0 000000 0 001112223456
Q ss_pred CCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCc-ccHHHHHHHHHHHHH
Q 002164 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAAR-ESIMHVLWETDRWLQ 895 (958)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~-~~~~~~~~~i~~fl~ 895 (958)
.++++|+|+++|++|..+| +....+.++.+. ...++++++++||..... +....+.+.+.+||.
T Consensus 209 ~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 209 KKFDIPTLVVHGDDDQVVP--IDATGRKSAQII---PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp TTCCSCEEEEEETTCSSSC--GGGTHHHHHHHS---TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred hcCCCCEEEEecCcCCCCC--cHHHHHHHHhhC---CCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 7889999999999999998 775544443332 246899999999987532 167788888998874
No 187
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.63 E-value=9.7e-15 Score=154.28 Aligned_cols=212 Identities=16% Similarity=0.135 Sum_probs=139.1
Q ss_pred EEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCC
Q 002164 643 KYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP 722 (958)
Q Consensus 643 ~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~ 722 (958)
.+.+.||.+++...+-+. ..|+||++||.+.... .|. .....|+ .+|.|++ .|
T Consensus 8 ~~~~~~g~~l~y~~~G~~--------~~p~lvl~hG~~~~~~-----------~w~----~~~~~L~-~~~~vi~---~D 60 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAA--------EKPLLALSNSIGTTLH-----------MWD----AQLPALT-RHFRVLR---YD 60 (266)
T ss_dssp EEECTTSCEEEEEEESCT--------TSCEEEEECCTTCCGG-----------GGG----GGHHHHH-TTCEEEE---EC
T ss_pred EEeccCCcEEEEEecCCC--------CCCEEEEeCCCccCHH-----------HHH----HHHHHhh-cCcEEEE---Ec
Confidence 356679999987776432 1588999999642211 111 2233454 5899999 67
Q ss_pred CCCCCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC
Q 002164 723 IIGEGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (958)
Q Consensus 723 ~~G~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~ 800 (958)
.+|+|.+.... .......+|+.+.++.+ ..+++.++||||||.+++.+|.++|++++++|++++........
T Consensus 61 ~rG~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~ 134 (266)
T 3om8_A 61 ARGHGASSVPPGPYTLARLGEDVLELLDAL------EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAA 134 (266)
T ss_dssp CTTSTTSCCCCSCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchh
Confidence 77888875432 23456677777766654 23589999999999999999999999999999987643211100
Q ss_pred -C-----------Cccccc--------chhh--hc---------------HH-------HHHhcCcccccCCCCCCEEEE
Q 002164 801 -F-----------GFQNED--------RTLW--EA---------------TS-------TYVEMSPFMSANKLKKPILLV 836 (958)
Q Consensus 801 -~-----------~~~~~~--------~~~~--~~---------------~~-------~~~~~sp~~~~~~~~~P~Lii 836 (958)
| ...... ...+ .. .. .+...+....+.++++|+|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi 214 (266)
T 3om8_A 135 QWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVI 214 (266)
T ss_dssp HHHHHHHHHHHCSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEE
T ss_pred HHHHHHHHHHccccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEE
Confidence 0 000000 0000 00 00 011112234567789999999
Q ss_pred eeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
+|++|..+| +..++++.+.+.. .++++++ +||.. ..+....+.+.+.+||.
T Consensus 215 ~G~~D~~~~--~~~~~~l~~~ip~----a~~~~i~-~gH~~-~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 215 AGAYDTVTA--ASHGELIAASIAG----ARLVTLP-AVHLS-NVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp EETTCSSSC--HHHHHHHHHHSTT----CEEEEES-CCSCH-HHHCHHHHHHHHHHHHT
T ss_pred EeCCCCCCC--HHHHHHHHHhCCC----CEEEEeC-CCCCc-cccCHHHHHHHHHHHhc
Confidence 999999998 8888888887765 4888888 69976 36677788888888874
No 188
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.63 E-value=2e-14 Score=152.96 Aligned_cols=282 Identities=10% Similarity=0.080 Sum_probs=189.9
Q ss_pred eeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCC
Q 002164 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (958)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~ 273 (958)
-.++.||++|+|.... +...||.++.+|+..++|+... .--++++|++|+|+.......
T Consensus 19 g~~~~~g~~iy~~n~~-------d~~~ly~~~~dg~~~~~l~~~~---------~~~i~~~g~~Iyy~~~~~~~~----- 77 (302)
T 3s25_A 19 GLFCESDGEVFFSNTN-------DNGRLYAMNIDGSNIHKLSNDT---------AMYINADKNYVYYVRNNNQKI----- 77 (302)
T ss_dssp TCEEEETTEEEEEEGG-------GTTEEEEEETTSCSCEEEEEEE---------EEEEEECSSEEEEEEECC--------
T ss_pred eEEEEeCCEEEEEeCC-------CCceEEEEcCCCCCCEEccCCc---------eeeEEEcCCEEEEEECCCCcc-----
Confidence 3467899999997642 2578999999999999997522 123579999999993221100
Q ss_pred CCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCCccccccccCCCCcEEEEEeec
Q 002164 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIH 352 (958)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~~~~~~~~~SpDGk~l~~~~~~ 352 (958)
+...+-......||++++ +++.++|.... ...|+++|++|+|+...
T Consensus 78 ------------------------------~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~---~~~~s~~g~~Iy~~~~~ 124 (302)
T 3s25_A 78 ------------------------------TSQTFFSYDRNSLCRIKRNGHGSTVLDPDP---CIYASLIGNYIYYLHYD 124 (302)
T ss_dssp ---------------------------------CCSSCCSEEEEEEETTSCCCEEEECSC---EEEEEEETTEEEEEEES
T ss_pred ------------------------------cccceeccCCCeEEEEeCCCCcceEeecCC---ccEEEEeCCEEEEEeec
Confidence 000000002356999999 55667776541 22689999999998711
Q ss_pred CCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccC
Q 002164 353 RPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPR 432 (958)
Q Consensus 353 ~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~ 432 (958)
.. ....|+.++++|+..++|+.... ..|+++|+.|+|.. ...
T Consensus 125 ~~---------~~~~Iy~~~~dGs~~~~lt~~~~-----------------~~~~~~g~~iy~t~------------~g~ 166 (302)
T 3s25_A 125 TQ---------TATSLYRIRIDGEEKKKIKNHYL-----------------FTCNTSDRYFYYNN------------PKN 166 (302)
T ss_dssp SS---------SCEEEEEEETTSCCCEEEESSCC-----------------CCSEEETTEEEEEC------------TTT
T ss_pred CC---------CCceEEEEECCCCCeEEEeCCCc-----------------eEeeEECCEEEEEe------------CCC
Confidence 10 13489999999988888886421 34789999988851 135
Q ss_pred CeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCC
Q 002164 433 DIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGS 512 (958)
Q Consensus 433 ~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (958)
.+||++++ +|+..++|.... ...+ ++|+|++|+|+.+.++ .+|++++++++ ..+++++...
T Consensus 167 ~~Iy~~~l---~g~~~~~l~~~~--~~~~-~~P~g~~iy~t~~~~~--~~I~~~~ldG~--~~~~Lt~~~~--------- 227 (302)
T 3s25_A 167 GQLYRYDT---ASQSEALFYDCN--CYKP-VVLDDTNVYYMDVNRD--NAIVHVNINNP--NPVVLTEANI--------- 227 (302)
T ss_dssp CCEEEEET---TTTEEEEEECSC--EEEE-EEEETTEEEEEEGGGT--TEEEEECSSSC--CCEECSCSCE---------
T ss_pred ceEEEEEC---CCCCEEEEeCCC--ccce-eeecCCEEEEEEcCCC--cEEEEEECCCC--CeEEEeCCCc---------
Confidence 57999985 777777775432 2223 5699999999977654 68999999995 4455543211
Q ss_pred CceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCcccccc
Q 002164 513 PMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLY 592 (958)
Q Consensus 513 ~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s 592 (958)
+.|+|+|++|+|... +...+|+.+++++...++|..... .+++
T Consensus 228 --~~~~~~g~~Iy~~~~-------------------~~~~~i~~~~~DG~~r~~l~~~~~----------------~~i~ 270 (302)
T 3s25_A 228 --EHYNVYGSLIFYQRG-------------------GDNPALCVVKNDGTGFKELAKGEF----------------CNIN 270 (302)
T ss_dssp --EEEEEETTEEEEEEC-------------------SSSCEEEEEETTSCCCEEEEESCE----------------EEEE
T ss_pred --ceEEECCCEEEEEEC-------------------CCCcEEEEEECCCCccEEeeCCcc----------------ceEE
Confidence 458999999988752 112479999999888888876431 1345
Q ss_pred ccCCEEEEEEecCCCCceEEEEECCCCCeeEeec
Q 002164 593 LNQLKILTSKESKTENTQYYIQSWPDKKSCQITD 626 (958)
Q Consensus 593 ~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~Lt~ 626 (958)
+-++.++++..... .|+++.+++...++|.+
T Consensus 271 i~~d~Iy~td~~~~---~i~~~~~dGs~~~~l~~ 301 (302)
T 3s25_A 271 VTSQYVYFTDFVSN---KEYCTSTQNPDTIKALQ 301 (302)
T ss_dssp ECSSEEEEEETTTC---CEEEEESSSCCSCEECC
T ss_pred EeCCEEEEEECCCC---eEEEEECCCCCceEecC
Confidence 56778888765332 38888877666666653
No 189
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.63 E-value=4.6e-15 Score=159.21 Aligned_cols=213 Identities=19% Similarity=0.160 Sum_probs=136.2
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++...+-+. . ..|.||++||++.... .+ . .....++++||.|++ .|.+|+
T Consensus 12 ~~g~~l~~~~~g~~-----~--~~~~vvllHG~~~~~~-----------~~---~-~~~~~l~~~g~~vi~---~D~~G~ 66 (293)
T 1mtz_A 12 VNGIYIYYKLCKAP-----E--EKAKLMTMHGGPGMSH-----------DY---L-LSLRDMTKEGITVLF---YDQFGC 66 (293)
T ss_dssp ETTEEEEEEEECCS-----S--CSEEEEEECCTTTCCS-----------GG---G-GGGGGGGGGTEEEEE---ECCTTS
T ss_pred ECCEEEEEEEECCC-----C--CCCeEEEEeCCCCcch-----------hH---H-HHHHHHHhcCcEEEE---ecCCCC
Confidence 37888876665321 1 1377899999642211 11 0 112245678999999 666788
Q ss_pred CCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC-----
Q 002164 727 GDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL----- 798 (958)
Q Consensus 727 G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~----- 798 (958)
|.+.... .......+|+.+.++.+. + .+++.|+||||||.+++.+|.++|++++++|+.++......
T Consensus 67 G~S~~~~~~~~~~~~~~~dl~~~~~~l~--~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (293)
T 1mtz_A 67 GRSEEPDQSKFTIDYGVEEAEALRSKLF--G---NEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEM 141 (293)
T ss_dssp TTSCCCCGGGCSHHHHHHHHHHHHHHHH--T---TCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHH
T ss_pred ccCCCCCCCcccHHHHHHHHHHHHHHhc--C---CCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHH
Confidence 8876542 224566777777777652 1 24899999999999999999999999999999987643100
Q ss_pred ------CCCC-------------cccc-c--------------chhhhcH-----------HHHH---------------
Q 002164 799 ------TPFG-------------FQNE-D--------------RTLWEAT-----------STYV--------------- 818 (958)
Q Consensus 799 ------~~~~-------------~~~~-~--------------~~~~~~~-----------~~~~--------------- 818 (958)
.+.. +... . ...|... ..+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (293)
T 1mtz_A 142 NRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 221 (293)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred HHHHHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceeccccccc
Confidence 0000 0000 0 0000000 0010
Q ss_pred hcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 819 EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 819 ~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
..+....+.++++|+|+++|++| .++ +..+.++.+.+. .+++++++++||... .++...+.+.+.+||.++
T Consensus 222 ~~~~~~~l~~i~~P~lii~G~~D-~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 222 DWDITDKISAIKIPTLITVGEYD-EVT--PNVARVIHEKIA----GSELHVFRDCSHLTM-WEDREGYNKLLSDFILKH 292 (293)
T ss_dssp TCBCTTTGGGCCSCEEEEEETTC-SSC--HHHHHHHHHHST----TCEEEEETTCCSCHH-HHSHHHHHHHHHHHHHTC
T ss_pred CCChhhhhccCCCCEEEEeeCCC-CCC--HHHHHHHHHhCC----CceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHhc
Confidence 01112345567899999999999 666 777777777654 358999999999874 456778888999999765
No 190
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.63 E-value=3.4e-14 Score=157.84 Aligned_cols=236 Identities=11% Similarity=0.128 Sum_probs=156.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++|++...+ +.|++|++.. +.......+.. +..
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d---------------------------------~~v~i~~~~~-~~~~~~~~~~~--h~~ 53 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNN---------------------------------HEVHIYEKSG-NKWVQVHELKE--HNG 53 (372)
T ss_dssp CCCEEEECTTSSEEEEECSS---------------------------------SEEEEEEEET-TEEEEEEEEEC--CSS
T ss_pred CeEEEEECCCCCEEEEEeCC---------------------------------CEEEEEeCCC-CcEEeeeeecC--CCC
Confidence 67889999999999988654 4789999854 10003344443 334
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeec---cCCCCccccccccceEEecCCeEEEEEecCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL---FQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~l---t~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (958)
.+....|+|||+.|+.... ...|.+|++.+++.... ..... .+..++|+|||+.|++..
T Consensus 54 ~v~~~~~~~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~---- 115 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGT---------DRNAYVWTLKGRTWKPTLVILRINR-----AARCVRWAPNEKKFAVGS---- 115 (372)
T ss_dssp CEEEEEEETTTTEEEEEET---------TSCEEEEEEETTEEEEEEECCCCSS-----CEEEEEECTTSSEEEEEE----
T ss_pred cccEEEEeCCCCEEEEEcC---------CCeEEEEECCCCeeeeeEEeecCCC-----ceeEEEECCCCCEEEEEe----
Confidence 7899999999999988652 45788888877764332 22222 277899999999998772
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe----eeecCC-C-cccccccc
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGP-P-AVYTSLDP 339 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~----~~~l~~-~-~~~~~~~~ 339 (958)
....|.++++ .+. ...+.. . ..+..++|
T Consensus 116 ---------------------------------------------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 116 ---------------------------------------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp ---------------------------------------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred ---------------------------------------------CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 1123555555 332 233322 2 67889999
Q ss_pred CCCCcEEEEEeecCCccccccCCCCCceeEEEeccC-------------------ceEEEeccCCccccCcccccccccC
Q 002164 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-------------------IFVRELCDLPLAEDIPIAFNSVRKG 400 (958)
Q Consensus 340 SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~-------------------~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (958)
+|||++|+....+ +.+.+||+.. .....+. .....
T Consensus 151 ~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 204 (372)
T 1k8k_C 151 HPNSVLLAAGSCD-------------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-------------SSCGW 204 (372)
T ss_dssp CTTSSEEEEEETT-------------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-------------CCSSC
T ss_pred cCCCCEEEEEcCC-------------CCEEEEEcccccccccccccccccccchhhheEecC-------------CCCCe
Confidence 9999999887633 4899999641 1222221 11234
Q ss_pred cceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccc
Q 002164 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (958)
Q Consensus 401 ~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (958)
+..+.|+|||+.++.. +..+.|.+|++ ..+.....+......+..+.|+|||+.|+.. .+ +.
T Consensus 205 v~~~~~~~~~~~l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d-~~ 266 (372)
T 1k8k_C 205 VHGVCFSANGSRVAWV-------------SHDSTVCLADA--DKKMAVATLASETLPLLAVTFITESSLVAAG--HD-CF 266 (372)
T ss_dssp EEEEEECSSSSEEEEE-------------ETTTEEEEEEG--GGTTEEEEEECSSCCEEEEEEEETTEEEEEE--TT-SS
T ss_pred EEEEEECCCCCEEEEE-------------eCCCEEEEEEC--CCCceeEEEccCCCCeEEEEEecCCCEEEEE--eC-Ce
Confidence 5789999999977763 44567899996 2344444555555567889999999877655 22 23
Q ss_pred eEEEEEcC
Q 002164 481 TRTWVISP 488 (958)
Q Consensus 481 ~~l~~~~~ 488 (958)
..+|.++.
T Consensus 267 i~i~~~~~ 274 (372)
T 1k8k_C 267 PVLFTYDS 274 (372)
T ss_dssp CEEEEEET
T ss_pred EEEEEccC
Confidence 66777765
No 191
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.63 E-value=9.1e-14 Score=152.57 Aligned_cols=219 Identities=9% Similarity=-0.011 Sum_probs=134.4
Q ss_pred ceEEEEEc-CCeeee-----cCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCC
Q 002164 314 TQLVLVSL-DGTVKE-----IGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLP 385 (958)
Q Consensus 314 ~~l~~~~~-~g~~~~-----l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~ 385 (958)
+.|.++|+ +|+... +..+ ..+..++|||||++|+..+.+ +.|.+||+.+++. +.+..+
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-------------~~i~iwd~~~~~~~~~~~~h- 168 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-------------ICIKVWDLAQQVVLSSYRAH- 168 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCC-
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCc-
Confidence 34666676 553221 1122 678899999999999987743 4899999986654 333322
Q ss_pred ccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE--eeccccCceee
Q 002164 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISW 463 (958)
Q Consensus 386 ~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~ 463 (958)
...+..+.|+||++.+++.. +..+.|.+||+ ..+.....+. .....+..+.|
T Consensus 169 ------------~~~V~~~~~~~~~~~~l~s~------------s~D~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 169 ------------AAQVTCVAASPHKDSVFLSC------------SEDNRILLWDT--RCPKPASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp ------------SSCEEEEEECSSCTTEEEEE------------ETTSCEEEEET--TSSSCEEECC----CCCEEEEEE
T ss_pred ------------CCceEEEEecCCCCCceeee------------ccccccccccc--cccceeeeeecceeeccceeeee
Confidence 24557899999998876641 34567899996 2333344442 22334567899
Q ss_pred ecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCce-EEEEeeeccCCCcEEEEcc
Q 002164 464 CDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTY-VIAKIKKENDEGTYILLNG 542 (958)
Q Consensus 464 spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~~~~~~~~~~~~~ 542 (958)
+|++..++.+...++ .|.++|+.++ +....+......+.. ++|+|||.. |+....+
T Consensus 223 ~p~~~~~l~sg~~dg---~v~~wd~~~~--~~~~~~~~h~~~v~~------v~fsp~g~~~lasgs~D------------ 279 (344)
T 4gqb_B 223 HPQQSEVFVFGDENG---TVSLVDTKST--SCVLSSAVHSQCVTG------LVFSPHSVPFLASLSED------------ 279 (344)
T ss_dssp CSSCTTEEEEEETTS---EEEEEESCC----CCEEEECCSSCEEE------EEECSSSSCCEEEEETT------------
T ss_pred cCCCCcceEEeccCC---cEEEEECCCC--cEEEEEcCCCCCEEE------EEEccCCCeEEEEEeCC------------
Confidence 997666554444332 3555666664 333444444444444 789999964 5554421
Q ss_pred CCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002164 543 NGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (958)
Q Consensus 543 ~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g 619 (958)
..|++||+.+++..++....+. +. ..+|+||++.++.+.... ..+.+++++++
T Consensus 280 ---------~~i~vwd~~~~~~~~~~~H~~~-----V~-------~v~~sp~~~~llas~s~D---~~v~~w~v~~~ 332 (344)
T 4gqb_B 280 ---------CSLAVLDSSLSELFRSQAHRDF-----VR-------DATWSPLNHSLLTTVGWD---HQVVHHVVPTE 332 (344)
T ss_dssp ---------SCEEEECTTCCEEEEECCCSSC-----EE-------EEEECSSSTTEEEEEETT---SCEEEEECCC-
T ss_pred ---------CeEEEEECCCCcEEEEcCCCCC-----EE-------EEEEeCCCCeEEEEEcCC---CeEEEEECCCC
Confidence 2499999998877665433221 22 257899998887766532 34777777654
No 192
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.63 E-value=2.1e-13 Score=149.43 Aligned_cols=262 Identities=13% Similarity=0.111 Sum_probs=150.0
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcC--CCceeeccCCCCc
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD--TGKARPLFQSPDI 240 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~--~g~~~~lt~~~~~ 240 (958)
+.|++|++..++ ..+.+........+..++|||||++|++... . ...|.+++++ +|+.+.+......
T Consensus 15 ~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~------~--~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 15 QQIHVWNLNHEG---ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR------P--EFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp TEEEEEEECTTS---CEEEEEEEECSSCCCCEEECTTSSEEEEEET------T--TTEEEEEEECTTTCCEEEEEEEECS
T ss_pred CeEEEEEECCCC---cEEEeeeEecCCCCceEEECCCCCEEEEeec------C--CCeEEEEEecCCCCceeeccccccC
Confidence 378899985433 2222222223346788999999999988653 1 2466666665 7776544322211
Q ss_pred cccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEE
Q 002164 241 YLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVS 320 (958)
Q Consensus 241 ~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~ 320 (958)
. .+..++|+|||+.|+++.. ....|++++
T Consensus 84 ~---~~~~~~~s~dg~~l~~~~~------------------------------------------------~~~~i~~~d 112 (343)
T 1ri6_A 84 G---SLTHISTDHQGQFVFVGSY------------------------------------------------NAGNVSVTR 112 (343)
T ss_dssp S---CCSEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEE
T ss_pred C---CCcEEEEcCCCCEEEEEec------------------------------------------------CCCeEEEEE
Confidence 1 1568999999998887611 123355666
Q ss_pred c-CCe---ee-ecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC-ceEEEec--cCCccccCcc
Q 002164 321 L-DGT---VK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFVRELC--DLPLAEDIPI 392 (958)
Q Consensus 321 ~-~g~---~~-~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~-~~~~~l~--~~~~~~~~p~ 392 (958)
+ +|. .. .+.....+..++|||||++|++.... .+.+.+|++++ +....+. ......
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~~~~~~~---- 176 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK------------QDRICLFTVSDDGHLVAQDPAEVTTVE---- 176 (343)
T ss_dssp EETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG------------GTEEEEEEECTTSCEEEEEEEEEECST----
T ss_pred CCCCccccccccccCCCCceEEEECCCCCEEEEecCC------------CCEEEEEEecCCCceeeecccccccCC----
Confidence 5 442 22 22222557788999999999877622 23899999986 5444322 111000
Q ss_pred cccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec---------cccCceee
Q 002164 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---------LRYGGISW 463 (958)
Q Consensus 393 ~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~---------~~~~~~~~ 463 (958)
...+..+.|+|||+.+++.. ...+.+.+++++. .+++.+.+.... .....++|
T Consensus 177 -----~~~~~~~~~~pdg~~l~~~~------------~~~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 177 -----GAGPRHMVFHPNEQYAYCVN------------ELNSSVDVWELKD-PHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp -----TCCEEEEEECTTSSEEEEEE------------TTTTEEEEEESSC-TTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred -----CCCcceEEECCCCCEEEEEe------------CCCCEEEEEEecC-CCCcEEEEeeccccCccccccCCccceEE
Confidence 02446789999999877641 2345788888621 233433332111 11225899
Q ss_pred ecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 464 CDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 464 spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
+|||++|+++...++ ...+|.++..++..+......... .... ++|+|||++|+...
T Consensus 239 s~dg~~l~v~~~~~~-~i~v~d~~~~~~~~~~~~~~~~~~-~~~~------~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 239 TPDGRHLYACDRTAS-LITVFSVSEDGSVLSKEGFQPTET-QPRG------FNVDHSGKYLIAAG 295 (343)
T ss_dssp CTTSSEEEEEETTTT-EEEEEEECTTSCCEEEEEEEECSS-SCCC------EEECTTSSEEEEEC
T ss_pred CCCCCEEEEEecCCC-EEEEEEEcCCCCceEEeeeecCCC-ccce------EEECCCCCEEEEec
Confidence 999999876653332 245555554343212111111111 1222 78999999888765
No 193
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.62 E-value=1.2e-13 Score=152.21 Aligned_cols=301 Identities=9% Similarity=0.039 Sum_probs=164.9
Q ss_pred CCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhh
Q 002164 217 SKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQ 296 (958)
Q Consensus 217 ~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 296 (958)
....+|.+|.++|+...+....... ....++|+|||+ |+++... .
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~~---~p~~~a~spdg~-l~~~~~~--------------------~----------- 60 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAATQ---NPTYLALSAKDC-LYSVDKE--------------------D----------- 60 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEECS---CCCCEEECTTCE-EEEEEEE--------------------T-----------
T ss_pred CCEEEEEEcCCCCeEEEeeeeeccC---CcceEEEccCCe-EEEEEec--------------------C-----------
Confidence 3456788888788776543221110 145799999999 6655100 0
Q ss_pred hhccCchhhhHHHHhhcceEEEEEc-CCeeeecCC---C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEE
Q 002164 297 DLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGP---P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVW 371 (958)
Q Consensus 297 d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~---~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~ 371 (958)
....|+++++ +|+.+.+.. . .....++|||||++|++.... .+.+.+|
T Consensus 61 ---------------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~------------~~~v~v~ 113 (347)
T 3hfq_A 61 ---------------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH------------KGTAEVM 113 (347)
T ss_dssp ---------------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred ---------------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC------------CCEEEEE
Confidence 2356888888 776655543 2 456778999999999888732 3479999
Q ss_pred ecc-CceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE
Q 002164 372 TTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (958)
Q Consensus 372 d~~-~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (958)
+++ .+..+.+.........|. .......+..+.|+|||+ +++. . ...+.+++|++ ..+++...
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~spdg~-l~v~-~-----------~~~~~v~~~~~--~~~g~~~~ 177 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPR-PEQDGSHIHYTDLTPDNR-LAVI-D-----------LGSDKVYVYNV--SDAGQLSE 177 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSS-TTCSSCCEEEEEECTTSC-EEEE-E-----------TTTTEEEEEEE--CTTSCEEE
T ss_pred EeCCCCCeeecceeecCCCCCC-ccccCCCceEEEECCCCc-EEEE-e-----------CCCCEEEEEEE--CCCCcEEE
Confidence 985 444444433221111110 000012345689999999 5442 2 23457888886 22444444
Q ss_pred EEeec----cccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEE
Q 002164 451 LHKLD----LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIA 526 (958)
Q Consensus 451 l~~~~----~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 526 (958)
+.... .....++|+|||++|++....++ ...+|.++..++.......................+.|||||++|+.
T Consensus 178 ~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v 256 (347)
T 3hfq_A 178 QSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS-QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYV 256 (347)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTTT-EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEE
T ss_pred eeeEEcCCCCCCceEEECCCCCEEEEEeCCCC-EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEE
Confidence 32211 12345799999998887654433 35566666544311111111111110000000112779999998876
Q ss_pred EeeeccCCCcEEEEccCCCCCCCCCCeEEEEECC-CCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecC
Q 002164 527 KIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN-TGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESK 605 (958)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~ 605 (958)
.... ...|.+|+++ +|+.+.+...... -..-...+|+|||+.+++.....
T Consensus 257 ~~~~--------------------~~~v~v~~~~~~g~~~~~~~~~~~---------~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 257 SNRG--------------------YNTLAVFAVTADGHLTLIQQISTE---------GDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp EEET--------------------TTEEEEEEECGGGCEEEEEEEECS---------SSCCCEEEECTTSSEEEEEETTT
T ss_pred EeCC--------------------CCEEEEEEECCCCcEEEeEEEecC---------CCCcCeEEECCCCCEEEEEEcCC
Confidence 6421 1258888875 3333333221110 00012357999999877665532
Q ss_pred CCCceEEEEECCCCCeeEeec
Q 002164 606 TENTQYYIQSWPDKKSCQITD 626 (958)
Q Consensus 606 ~~p~~~~~~d~~~g~~~~Lt~ 626 (958)
..-.+|.++..+|+.+.+..
T Consensus 308 -~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 308 -DNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp -TEEEEEEECTTTCCEEEEEE
T ss_pred -CcEEEEEEeCCCCeEEeccc
Confidence 23345666877888776653
No 194
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.62 E-value=3e-15 Score=167.15 Aligned_cols=225 Identities=12% Similarity=0.011 Sum_probs=144.0
Q ss_pred CcEEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcE-
Q 002164 637 LQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFA- 714 (958)
Q Consensus 637 ~~~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~- 714 (958)
.+.+.++|.+. .|....+++|+|++++ ..++|+|+++||+.+. .. ......+..|+++|++
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~~---~~~~PvlvllHG~~~~--------~~------~~~~~~~~~l~~~g~~~ 228 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDVT---AEERPLAVLLDGEFWA--------QS------MPVWPVLTSLTHRQQLP 228 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHH--------HT------SCCHHHHHHHHHTTSSC
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCCC---CCCCCEEEEeCCHHHh--------hc------CcHHHHHHHHHHcCCCC
Confidence 35677788765 6788999999998764 2359999999995321 10 0112346678888875
Q ss_pred ---EEEcCCCCCCCCCCccc-chhhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEE
Q 002164 715 ---ILGGPTTPIIGEGDEEA-NDRFVEQLVACAEAAVEEVVRRG--VAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGI 788 (958)
Q Consensus 715 ---vl~~~~~~~~G~G~~~~-~~~~~~~~~~D~~~av~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v 788 (958)
|+.+++.+..+...... ...+..... .+++.++.++. ..|+++++|+|+||||++|+.++.++|++|++++
T Consensus 229 p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~---~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~ 305 (403)
T 3c8d_A 229 PAVYVLIDAIDTTHRAHELPCNADFWLAVQ---QELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVL 305 (403)
T ss_dssp SCEEEEECCCSHHHHHHHSSSCHHHHHHHH---HTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEE
T ss_pred CeEEEEECCCCCccccccCCChHHHHHHHH---HHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 88866543111110000 111111122 34566776653 2588999999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEE
Q 002164 789 ARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLV 868 (958)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 868 (958)
+.+|.+.+.... - .....+. ..+.. . .......|++++||+.|..+ ..++++++++|+..|+++++.
T Consensus 306 ~~sg~~~~~~~~--~-~~~~~~~---~~~~~-~---~~~~~~~~i~l~~G~~D~~~---~~~~~~l~~~L~~~G~~v~~~ 372 (403)
T 3c8d_A 306 SQSGSYWWPHRG--G-QQEGVLL---EKLKA-G---EVSAEGLRIVLEAGIREPMI---MRANQALYAQLHPIKESIFWR 372 (403)
T ss_dssp EESCCTTTTCTT--S-SSCCHHH---HHHHT-T---SSCCCSCEEEEEEESSCHHH---HHHHHHHHHHTGGGTTSEEEE
T ss_pred EeccccccCCCC--C-CcHHHHH---HHHHh-c---cccCCCceEEEEeeCCCchh---HHHHHHHHHHHHhCCCCEEEE
Confidence 999976432110 0 0001111 11111 1 12345679999999998653 588999999999999999999
Q ss_pred EeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 869 ILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 869 ~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
+||| +|.+. .....+...+.||.+..
T Consensus 373 ~~~G-gH~~~---~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 373 QVDG-GHDAL---CWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp EESC-CSCHH---HHHHHHHHHHHHHHGGG
T ss_pred EeCC-CCCHH---HHHHHHHHHHHHHhccc
Confidence 9999 69852 23445666777776653
No 195
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.62 E-value=4.9e-15 Score=156.98 Aligned_cols=205 Identities=15% Similarity=0.104 Sum_probs=130.6
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G 727 (958)
+|.+++.... + ..|+||++||.+.... .|.. ....|++ ||.|++ .+.+|+|
T Consensus 11 ~~~~~~y~~~---g-------~~~~vv~~HG~~~~~~-----------~~~~----~~~~L~~-~~~vi~---~d~~G~G 61 (278)
T 3oos_A 11 PRGKFEYFLK---G-------EGPPLCVTHLYSEYND-----------NGNT----FANPFTD-HYSVYL---VNLKGCG 61 (278)
T ss_dssp TTEEEEEEEE---C-------SSSEEEECCSSEECCT-----------TCCT----TTGGGGG-TSEEEE---ECCTTST
T ss_pred CCceEEEEec---C-------CCCeEEEEcCCCcchH-----------HHHH----HHHHhhc-CceEEE---EcCCCCC
Confidence 6777764432 1 1468999999642211 1211 1234555 999999 5666788
Q ss_pred Ccccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC---
Q 002164 728 DEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--- 800 (958)
Q Consensus 728 ~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~--- 800 (958)
.+.... .......+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++........
T Consensus 62 ~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~ 135 (278)
T 3oos_A 62 NSDSAKNDSEYSMTETIKDLEAIREAL------YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKD 135 (278)
T ss_dssp TSCCCSSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTT
T ss_pred CCCCCCCcccCcHHHHHHHHHHHHHHh------CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccc
Confidence 775532 12345555555555443 34589999999999999999999999999999999875511000
Q ss_pred --CCccccc---------------------ch---hh-------------------------hcHH-----HHHhcCccc
Q 002164 801 --FGFQNED---------------------RT---LW-------------------------EATS-----TYVEMSPFM 824 (958)
Q Consensus 801 --~~~~~~~---------------------~~---~~-------------------------~~~~-----~~~~~sp~~ 824 (958)
+...... .. .| .... .+...+...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (278)
T 3oos_A 136 SIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQ 215 (278)
T ss_dssp STTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHH
T ss_pred hhhhhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHH
Confidence 0000000 00 00 0000 011223334
Q ss_pred ccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 825 SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 825 ~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
.+.++++|+|+++|++|..+| ++.+.++.+.++ .+++++++++||... .++...+.+.+.+||
T Consensus 216 ~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 216 KLKFVKIPSFIYCGKHDVQCP--YIFSCEIANLIP----NATLTKFEESNHNPF-VEEIDKFNQFVNDTL 278 (278)
T ss_dssp HHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHST----TEEEEEETTCSSCHH-HHSHHHHHHHHHHTC
T ss_pred HHhCCCCCEEEEEeccCCCCC--HHHHHHHHhhCC----CcEEEEcCCcCCCcc-cccHHHHHHHHHhhC
Confidence 567889999999999999998 888888887763 379999999999874 345566666666653
No 196
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.62 E-value=1.3e-14 Score=156.05 Aligned_cols=210 Identities=15% Similarity=0.097 Sum_probs=137.0
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++...+-|+ . .|.||++||.+... ..+....+..|+++||.|++ .|.+|+
T Consensus 8 ~~g~~l~y~~~G~~------~--~~~vvllHG~~~~~--------------~~w~~~~~~~L~~~G~~vi~---~D~rG~ 62 (298)
T 1q0r_A 8 SGDVELWSDDFGDP------A--DPALLLVMGGNLSA--------------LGWPDEFARRLADGGLHVIR---YDHRDT 62 (298)
T ss_dssp ETTEEEEEEEESCT------T--SCEEEEECCTTCCG--------------GGSCHHHHHHHHTTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEeccCC------C--CCeEEEEcCCCCCc--------------cchHHHHHHHHHhCCCEEEe---eCCCCC
Confidence 48888887766432 1 36789999964211 11122234678889999999 666788
Q ss_pred CCccc--c-h--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCC-CC----
Q 002164 727 GDEEA--N-D--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY-NR---- 796 (958)
Q Consensus 727 G~~~~--~-~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~-~~---- 796 (958)
|.+.. + . .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|++++.. ..
T Consensus 63 G~S~~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 136 (298)
T 1q0r_A 63 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDA 136 (298)
T ss_dssp TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHH
T ss_pred CCCCCCCCCcCCcCHHHHHHHHHHHHHHh------CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCccccc
Confidence 88754 1 1 23456677777777664 33589999999999999999999999999999987654 21
Q ss_pred -------------CCCCCC------c-c----cccc------------------hhhhcH-------HHHHhc-------
Q 002164 797 -------------TLTPFG------F-Q----NEDR------------------TLWEAT-------STYVEM------- 820 (958)
Q Consensus 797 -------------~~~~~~------~-~----~~~~------------------~~~~~~-------~~~~~~------- 820 (958)
...... + . .... ..+... ..+...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (298)
T 1q0r_A 137 NIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP 216 (298)
T ss_dssp HHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC
T ss_pred chhhhhhhhhhhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchh
Confidence 000000 0 0 0000 000000 000000
Q ss_pred ----------Ccccc-cCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHH
Q 002164 821 ----------SPFMS-ANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWE 889 (958)
Q Consensus 821 ----------sp~~~-~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~ 889 (958)
+.... +.++++|+|+++|++|..+| +..++++.+.+. ..+++++|++||.. ...+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~gHe~-----p~~~~~~ 285 (298)
T 1q0r_A 217 YAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAP--APHGKHLAGLIP----TARLAEIPGMGHAL-----PSSVHGP 285 (298)
T ss_dssp CGGGGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSC--TTHHHHHHHTST----TEEEEEETTCCSSC-----CGGGHHH
T ss_pred hhhhhhhcCcccccccccccCCCEEEEEeCCCccCC--HHHHHHHHHhCC----CCEEEEcCCCCCCC-----cHHHHHH
Confidence 01123 66789999999999999998 888877766553 36999999999932 2456788
Q ss_pred HHHHHHHhh
Q 002164 890 TDRWLQKYC 898 (958)
Q Consensus 890 i~~fl~~~l 898 (958)
+.+||.+++
T Consensus 286 i~~fl~~~~ 294 (298)
T 1q0r_A 286 LAEVILAHT 294 (298)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 899998875
No 197
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.61 E-value=4e-15 Score=156.06 Aligned_cols=198 Identities=9% Similarity=-0.016 Sum_probs=130.0
Q ss_pred eEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHH
Q 002164 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAV 747 (958)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av 747 (958)
|+||++||.+... ..| ......|+++||.|++ .+.+|+|.+.... .......+|+.+.+
T Consensus 5 ~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 66 (258)
T 3dqz_A 5 HHFVLVHNAYHGA-----------WIW----YKLKPLLESAGHRVTA---VELAASGIDPRPIQAVETVDEYSKPLIETL 66 (258)
T ss_dssp CEEEEECCTTCCG-----------GGG----TTHHHHHHHTTCEEEE---ECCTTSTTCSSCGGGCCSHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcc-----------ccH----HHHHHHHHhCCCEEEE---ecCCCCcCCCCCCCccccHHHhHHHHHHHH
Confidence 8899999964221 112 1346678899999999 5666888775432 23445555555555
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCC-------------cccccc------
Q 002164 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG-------------FQNEDR------ 808 (958)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~-------------~~~~~~------ 808 (958)
+.+ + . .+++.|+|||+||.+++.++.++|++++++|++++.......... ......
T Consensus 67 ~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (258)
T 3dqz_A 67 KSL---P-E-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRN 141 (258)
T ss_dssp HTS---C-T-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETT
T ss_pred HHh---c-c-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhc
Confidence 443 2 1 268999999999999999999999999999999875432111100 000000
Q ss_pred ---------h------hh--hcHHH-----------------HHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHH
Q 002164 809 ---------T------LW--EATST-----------------YVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (958)
Q Consensus 809 ---------~------~~--~~~~~-----------------~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (958)
. .. ..... +............++|+|+++|++|..+| ++..+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~ 219 (258)
T 3dqz_A 142 GTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIP--CDFIRWM 219 (258)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHHHHH
T ss_pred cChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeC--HHHHHHH
Confidence 0 00 00000 00011222222236899999999999998 8888888
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 855 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
.+.+.. .+++++|++||... .++...+.+.|.+|+++|+
T Consensus 220 ~~~~~~----~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 220 IDNFNV----SKVYEIDGGDHMVM-LSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HHHSCC----SCEEEETTCCSCHH-HHSHHHHHHHHHHHHHHTC
T ss_pred HHhCCc----ccEEEcCCCCCchh-hcChHHHHHHHHHHHHHhC
Confidence 877643 38889999999864 4667888899999999874
No 198
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.61 E-value=4.2e-15 Score=154.26 Aligned_cols=195 Identities=12% Similarity=0.085 Sum_probs=127.7
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchh-hHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR-FVEQLVACAEAAVE 748 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~-~~~~~~~D~~~av~ 748 (958)
.|+||++||.+..... |. ....|+ +||.|++ .+.+|+|.+..... ......+|+.++++
T Consensus 16 ~~~vv~~hG~~~~~~~-----------~~-----~~~~l~-~g~~v~~---~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e0x_A 16 PNTLLFVHGSGCNLKI-----------FG-----ELEKYL-EDYNCIL---LDLKGHGESKGQCPSTVYGYIDNVANFIT 75 (245)
T ss_dssp SCEEEEECCTTCCGGG-----------GT-----TGGGGC-TTSEEEE---ECCTTSTTCCSCCCSSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHH-----------HH-----HHHHHH-hCCEEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 6899999996532211 11 122333 8999999 55567777653322 35566777777764
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHh-CCCceeEEEEeccCCCCCCCCCCc-c---c-------------c-c--
Q 002164 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAH-APHLFCCGIARSGAYNRTLTPFGF-Q---N-------------E-D-- 807 (958)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~~~~~~~~~~~~~-~---~-------------~-~-- 807 (958)
+...+...+ ++.++|||+||.+++.++.+ +|+ ++++|+++|........... . . . .
T Consensus 76 ~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T 3e0x_A 76 NSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNP 152 (245)
T ss_dssp HCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSH
T ss_pred hhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchH
Confidence 443333344 99999999999999999999 999 99999999876541110000 0 0 0 0
Q ss_pred -------------chhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 002164 808 -------------RTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFES 874 (958)
Q Consensus 808 -------------~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~ 874 (958)
.............+....+.++++|+|+++|++|..+| ++.+.++++.++ .++++++|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~g 226 (245)
T 3e0x_A 153 LSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTL--VEYSEIIKKEVE----NSELKIFETGK 226 (245)
T ss_dssp HHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSC--HHHHHHHHHHSS----SEEEEEESSCG
T ss_pred HHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCC--HHHHHHHHHHcC----CceEEEeCCCC
Confidence 00001111123344556677889999999999999998 888888887764 37999999999
Q ss_pred ccCCCcccHHHHHHHHHHHH
Q 002164 875 HGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 875 H~~~~~~~~~~~~~~i~~fl 894 (958)
|.+. .++...+.+.+.+||
T Consensus 227 H~~~-~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 227 HFLL-VVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGHH-HHTHHHHHHHHHTTC
T ss_pred cceE-EecHHHHHHHHHhhC
Confidence 9863 344555556665553
No 199
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.61 E-value=1.6e-14 Score=153.59 Aligned_cols=209 Identities=15% Similarity=0.108 Sum_probs=136.6
Q ss_pred eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCC
Q 002164 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (958)
Q Consensus 646 ~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G 725 (958)
..+|.+++...+ + + .|.||++||.+... ..| ......|+++||.|++ .|.+|
T Consensus 9 ~~~g~~l~y~~~---g-----~--g~pvvllHG~~~~~-----------~~~----~~~~~~L~~~g~~vi~---~D~~G 60 (277)
T 1brt_A 9 NSTSIDLYYEDH---G-----T--GQPVVLIHGFPLSG-----------HSW----ERQSAALLDAGYRVIT---YDRRG 60 (277)
T ss_dssp TTEEEEEEEEEE---C-----S--SSEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECCTT
T ss_pred cCCCcEEEEEEc---C-----C--CCeEEEECCCCCcH-----------HHH----HHHHHHHhhCCCEEEE---eCCCC
Confidence 346777765544 1 1 13388899964221 111 2345678889999999 66678
Q ss_pred CCCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEeccCCCCCCC---
Q 002164 726 EGDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-LFCCGIARSGAYNRTLT--- 799 (958)
Q Consensus 726 ~G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~~~~~~~~~--- 799 (958)
+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|+ +++++|+.++.......
T Consensus 61 ~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~ 134 (277)
T 1brt_A 61 FGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDD 134 (277)
T ss_dssp STTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTT
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCcccccccc
Confidence 88875432 23456677888877765 23589999999999999999999998 99999999874321110
Q ss_pred -CCC-cccc-----------cc-h--------hhh---------cH---HHHH------------------hcCcccccC
Q 002164 800 -PFG-FQNE-----------DR-T--------LWE---------AT---STYV------------------EMSPFMSAN 827 (958)
Q Consensus 800 -~~~-~~~~-----------~~-~--------~~~---------~~---~~~~------------------~~sp~~~~~ 827 (958)
+.+ .... .. . .+. .. ..+. ..+....+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 214 (277)
T 1brt_A 135 NPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIP 214 (277)
T ss_dssp BTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGG
T ss_pred CccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcc
Confidence 000 0000 00 0 000 00 0000 112223456
Q ss_pred CCCCCEEEEeeCCCCCCCCChHHH-HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 828 KLKKPILLVHGEEDNNSGTLTMQS-DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 828 ~~~~P~Lii~G~~D~~v~~~~~~~-~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
++++|+|+++|++|..+| +..+ .++.+.+.. .+++++|++||... .+....+.+.+.+||.
T Consensus 215 ~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 215 RIDVPALILHGTGDRTLP--IENTARVFHKALPS----AEYVEVEGAPHGLL-WTHAEEVNTALLAFLA 276 (277)
T ss_dssp GCCSCEEEEEETTCSSSC--GGGTHHHHHHHCTT----SEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred cCCCCeEEEecCCCccCC--hHHHHHHHHHHCCC----CcEEEeCCCCcchh-hhCHHHHHHHHHHHHh
Confidence 789999999999999998 7877 777776543 58899999999864 4566778888899885
No 200
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.61 E-value=1e-13 Score=149.61 Aligned_cols=266 Identities=12% Similarity=0.108 Sum_probs=171.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++|+....+ +.|.+|++.+ + ...+.+.. ...
T Consensus 15 ~V~~~~fsp~~~~l~s~~~d---------------------------------g~v~lWd~~~-~--~~~~~~~~--~~~ 56 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYS---------------------------------GRVELWNYET-Q--VEVRSIQV--TET 56 (304)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CSS
T ss_pred ceEEEEECCCCCEEEEEcCC---------------------------------CcEEEEECCC-C--ceeEEeec--cCC
Confidence 56789999999999988875 5789999854 1 22344433 224
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+....|+|||++|+.... ...|.+|++.+++........... +..++|+||++.|+...
T Consensus 57 ~v~~~~~~~~~~~l~s~s~---------d~~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~sgs------- 116 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSD---------DFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGS------- 116 (304)
T ss_dssp CEEEEEEEGGGTEEEEEET---------TSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEE-------
T ss_pred cEEEEEEeCCCCEEEEECC---------CCEEEEEECCCCcEEEEEeCCCCc----EEEEEEcCCCCEEEEEC-------
Confidence 6888999999999988652 568999999988765443333322 77899999999988662
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC-eee-ecCCC-ccccccccCC-CCc
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVK-EIGPP-AVYTSLDPSP-DEK 344 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g-~~~-~l~~~-~~~~~~~~Sp-DGk 344 (958)
....|.++++ ++ ... .+... ..+..++|+| |++
T Consensus 117 ------------------------------------------~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 117 ------------------------------------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp ------------------------------------------TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred ------------------------------------------CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 1234667777 55 333 33333 6688999999 677
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeec--CCCCceEEEEecc
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS--DKPSTLYWAETQD 421 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp--DG~~l~~~~~~~~ 421 (958)
.|+..+. ++.|.+||+..... ..+.... ...+..+.|+| |++.++..
T Consensus 155 ~l~sgs~-------------D~~v~iwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~l~s~----- 204 (304)
T 2ynn_A 155 TFASGCL-------------DRTVKVWSLGQSTPNFTLTTGQ------------ERGVNYVDYYPLPDKPYMITA----- 204 (304)
T ss_dssp EEEEEET-------------TSEEEEEETTCSSCSEEEECCC------------TTCEEEEEECCSTTCCEEEEE-----
T ss_pred EEEEEeC-------------CCeEEEEECCCCCccceeccCC------------cCcEEEEEEEEcCCCCEEEEE-----
Confidence 7776663 34899999974332 2222110 12334567776 56655542
Q ss_pred CCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecc
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR 501 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 501 (958)
+..+.|.+||+ ..+.....+..+...+..+.|+|+++.|+..+.++. .+|| ++.++ +.......
T Consensus 205 --------s~D~~i~iWd~--~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~--i~iW--d~~~~--~~~~~~~~ 268 (304)
T 2ynn_A 205 --------SDDLTIKIWDY--QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT--LKIW--NSSTY--KVEKTLNV 268 (304)
T ss_dssp --------ETTSEEEEEET--TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC--EEEE--ETTTC--CEEEEECC
T ss_pred --------cCCCeEEEEeC--CCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCe--EEEE--ECCCC--ceeeeccC
Confidence 45668999996 233334455556667788999999998887765443 4455 55553 23333333
Q ss_pred CCccccCCCCCCceEeccCCce--EEEE
Q 002164 502 SSEDVYSDPGSPMMRRTSTGTY--VIAK 527 (958)
Q Consensus 502 ~~~~~~~~~~~~~~~~spdG~~--l~~~ 527 (958)
....++. ++|+|+|.. ++..
T Consensus 269 ~~~~~~~------~~~~~~~~~~~~asg 290 (304)
T 2ynn_A 269 GLERSWC------IATHPTGRKNYIASG 290 (304)
T ss_dssp SSSSEEE------EEECTTCGGGCEEEE
T ss_pred CCccEEE------EEECCCCCceEEEEe
Confidence 3333333 678888863 4444
No 201
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.61 E-value=5.2e-14 Score=160.44 Aligned_cols=294 Identities=13% Similarity=0.112 Sum_probs=177.0
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCC
Q 002164 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (958)
Q Consensus 110 ~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~ 188 (958)
.+..++|+| +++.||..+.+ +.|.||++.. + .....++...+.
T Consensus 121 ~V~~l~~~P~~~~~lasGs~d---------------------------------g~i~lWd~~~-~--~~~~~~~~~gH~ 164 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKG---------------------------------GDIMLWNFGI-K--DKPTFIKGIGAG 164 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETT---------------------------------SCEEEECSSC-C--SCCEEECCCSSS
T ss_pred CEEEEEEeCCCCCEEEEEeCC---------------------------------CEEEEEECCC-C--CceeEEEccCCC
Confidence 366788999 56677776664 5899999854 1 122222212234
Q ss_pred CcccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCC
Q 002164 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (958)
Q Consensus 189 ~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (958)
..+....|+| ||++|+... ....|.+||++++..+.+...... ...+..++|+|||++|+...
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s---------~D~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~----- 228 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASS---------MEGTTRLQDFKGNILRVFASSDTI--NIWFCSLDVSASSRMVVTGD----- 228 (435)
T ss_dssp CCCCEEEECSSCTTEEEEEC---------SSSCEEEEETTSCEEEEEECCSSC--SCCCCCEEEETTTTEEEEEC-----
T ss_pred CCEEEEEEeCCCCCEEEEEe---------CCCEEEEeeccCCceeEEeccCCC--CccEEEEEECCCCCEEEEEe-----
Confidence 5799999999 677776643 245788889988766555433221 11245789999999998761
Q ss_pred CCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCCCCcE
Q 002164 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKY 345 (958)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~ 345 (958)
..+.|.++++ +.....+... ..+..++|+|+++.
T Consensus 229 --------------------------------------------~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 229 --------------------------------------------NVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp --------------------------------------------SSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSS
T ss_pred --------------------------------------------CCCcEeeeccCcceeEEEecccceEEeeeecCCCce
Confidence 2245778888 4455555444 67889999999997
Q ss_pred EEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
++++... ++.|.+||+...... .+... .++...+..+.|+|||+.|+..
T Consensus 265 ~~~s~s~------------d~~v~iwd~~~~~~~~~~~~~----------~~h~~~v~~~~~spdg~~l~s~-------- 314 (435)
T 4e54_B 265 FLATASV------------DQTVKIWDLRQVRGKASFLYS----------LPHRHPVNAACFSPDGARLLTT-------- 314 (435)
T ss_dssp EEEEEET------------TSBCCEEETTTCCSSSCCSBC----------CBCSSCEEECCBCTTSSEEEEE--------
T ss_pred EEEEecC------------cceeeEEecccccccceEEEe----------eeccccccceeECCCCCeeEEE--------
Confidence 7666533 347899998753321 11111 1122455788999999987763
Q ss_pred cccccccCCeEEEEeCCCCCCCCceEEEeecc------ccCceeeecCCceEEEEEeccc--------cceEEEEEcCCC
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYKT--------RRTRTWVISPGS 490 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~------~~~~~~~spDg~~l~~~~~~~~--------~~~~l~~~~~~~ 490 (958)
+..+.|.+|++ ..+.....+..... ......|+|++..++.....++ ....|.+++..+
T Consensus 315 -----~~D~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~ 387 (435)
T 4e54_B 315 -----DQKSEIRVYSA--SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS 387 (435)
T ss_dssp -----ESSSCEEEEES--SSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred -----cCCCEEEEEEC--CCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence 45667899996 33444444422211 1234678888888877653221 112366667666
Q ss_pred CCCCcE-EEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceE
Q 002164 491 KDVAPR-ILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (958)
Q Consensus 491 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~ 565 (958)
+ +.. .+.......+.. ...|||||++|+... + ..|++||+++|+.+
T Consensus 388 g--~~~~~l~~~~~~~v~s-----~~~fspdg~~lasg~-d---------------------~~i~iW~~~~gk~r 434 (435)
T 4e54_B 388 G--KMMCQLYDPESSGISS-----LNEFNPMGDTLASAM-G---------------------YHILIWSQQEARTR 434 (435)
T ss_dssp C--CEEEEECCSSCCCCCC-----EEEECTTSSCEEEEC-S---------------------SEEEECCCC-----
T ss_pred C--cEEEEEeCCCCCcEEE-----EEEECCCCCEEEEEc-C---------------------CcEEEEECCcCeee
Confidence 4 222 222233332222 136999999887653 1 15899999988765
No 202
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.61 E-value=8.4e-15 Score=158.32 Aligned_cols=216 Identities=14% Similarity=0.051 Sum_probs=134.6
Q ss_pred EEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcC
Q 002164 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (958)
Q Consensus 640 ~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~ 719 (958)
+...++. +|..++.+.+-|. ..|+||++||++.... .|. ..+..|++ ||.|+++
T Consensus 46 ~~~~v~~-~~~~~~~~~~g~~--------~~~~vv~lHG~~~~~~-----------~~~----~~~~~L~~-g~~vi~~- 99 (306)
T 2r11_A 46 KSFYIST-RFGQTHVIASGPE--------DAPPLVLLHGALFSST-----------MWY----PNIADWSS-KYRTYAV- 99 (306)
T ss_dssp EEEEECC-TTEEEEEEEESCT--------TSCEEEEECCTTTCGG-----------GGT----TTHHHHHH-HSEEEEE-
T ss_pred ceEEEec-CCceEEEEeeCCC--------CCCeEEEECCCCCCHH-----------HHH----HHHHHHhc-CCEEEEe-
Confidence 4444554 5567766654321 2578999999752211 111 12445666 9999994
Q ss_pred CCCCCCC-CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC
Q 002164 720 TTPIIGE-GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (958)
Q Consensus 720 ~~~~~G~-G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (958)
+.+|+ |.+... ........+|+.++++.+ +.+++.|+|||+||.+++.+|.++|++++++|+++|....
T Consensus 100 --D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 171 (306)
T 2r11_A 100 --DIIGDKNKSIPENVSGTRTDYANWLLDVFDNL------GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETF 171 (306)
T ss_dssp --CCTTSSSSCEECSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBT
T ss_pred --cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCcccc
Confidence 45566 555432 223455566666665543 3368999999999999999999999999999999987653
Q ss_pred CCCCCCcc-----cc------------------cchhhhcHHHHH------------------hcCcccccCCCCCCEEE
Q 002164 797 TLTPFGFQ-----NE------------------DRTLWEATSTYV------------------EMSPFMSANKLKKPILL 835 (958)
Q Consensus 797 ~~~~~~~~-----~~------------------~~~~~~~~~~~~------------------~~sp~~~~~~~~~P~Li 835 (958)
........ .. ............ .......+.++++|+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 251 (306)
T 2r11_A 172 LPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILL 251 (306)
T ss_dssp SCCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEE
T ss_pred CcccHHHHHHHhHHHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEE
Confidence 21110000 00 000000000000 00112234567899999
Q ss_pred EeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 836 VHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 836 i~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
++|++|..+| +..+.++++.+. ..++++++|++||.+. .+....+.+.|.+||+
T Consensus 252 i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 252 LLGEHEVIYD--PHSALHRASSFV---PDIEAEVIKNAGHVLS-MEQPTYVNERVMRFFN 305 (306)
T ss_dssp EEETTCCSSC--HHHHHHHHHHHS---TTCEEEEETTCCTTHH-HHSHHHHHHHHHHHHC
T ss_pred EEeCCCcccC--HHHHHHHHHHHC---CCCEEEEeCCCCCCCc-ccCHHHHHHHHHHHHh
Confidence 9999999998 887776665432 2468999999999863 4556677788888874
No 203
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.61 E-value=1.5e-14 Score=152.93 Aligned_cols=198 Identities=15% Similarity=0.130 Sum_probs=131.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~a 746 (958)
.|+||++||.+... ..| ......| +++|.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 15 ~~~vvllHG~~~~~-----------~~w----~~~~~~L-~~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 75 (268)
T 3v48_A 15 APVVVLISGLGGSG-----------SYW----LPQLAVL-EQEYQVVC---YDQRGTGNNPDTLAEDYSIAQMAAELHQA 75 (268)
T ss_dssp CCEEEEECCTTCCG-----------GGG----HHHHHHH-HTTSEEEE---CCCTTBTTBCCCCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCccH-----------HHH----HHHHHHH-hhcCeEEE---ECCCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 58899999964211 111 1223344 56799999 6777888875431 2345556666665
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC-CCccc--------------c-----
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-FGFQN--------------E----- 806 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~~~~~--------------~----- 806 (958)
++.+ +.+++.|+||||||.+++.+|.++|++++++|++++........ ..+.. .
T Consensus 76 l~~l------~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T 3v48_A 76 LVAA------GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLF 149 (268)
T ss_dssp HHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHc------CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhh
Confidence 5442 23589999999999999999999999999999988743211000 00000 0
Q ss_pred -cchhhh-------------------c-------HHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHH
Q 002164 807 -DRTLWE-------------------A-------TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALK 859 (958)
Q Consensus 807 -~~~~~~-------------------~-------~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~ 859 (958)
....|. . ...+...+....+.++++|+|+++|++|..+| +..++++.+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~l~~~~p 227 (268)
T 3v48_A 150 LYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVP--TACSSELHAALP 227 (268)
T ss_dssp HSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSC--THHHHHHHHHCS
T ss_pred cCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccC--HHHHHHHHHhCC
Confidence 000000 0 00111222334567889999999999999998 888888887764
Q ss_pred hCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 860 GHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 860 ~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
. .+++++|++||.. ..+....+.+.+.+||.+.+.
T Consensus 228 ~----~~~~~~~~~GH~~-~~e~p~~~~~~i~~fl~~~~~ 262 (268)
T 3v48_A 228 D----SQKMVMPYGGHAC-NVTDPETFNALLLNGLASLLH 262 (268)
T ss_dssp S----EEEEEESSCCTTH-HHHCHHHHHHHHHHHHHHHHH
T ss_pred c----CeEEEeCCCCcch-hhcCHHHHHHHHHHHHHHhcc
Confidence 3 6899999999986 367778889999999987653
No 204
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.61 E-value=6.4e-15 Score=155.31 Aligned_cols=196 Identities=15% Similarity=0.093 Sum_probs=129.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccc----hh--hHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAN----DR--FVEQLVACA 743 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~----~~--~~~~~~~D~ 743 (958)
.|+||++||.+.... .|. .....|++ ||.|++ .+.+|+|.+... .. ......+|+
T Consensus 20 ~p~vv~~HG~~~~~~-----------~~~----~~~~~l~~-g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 20 ERVLVLAHGFGTDQS-----------AWN----RILPFFLR-DYRVVL---YDLVCAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp SSEEEEECCTTCCGG-----------GGT----TTGGGGTT-TCEEEE---ECCTTSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred CCEEEEEeCCCCcHH-----------HHH----HHHHHHhC-CcEEEE---EcCCCCCCCCCCCCCccccCcHHHHHHHH
Confidence 589999999643221 111 12334555 999999 556677777441 11 245566666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCC---ccccc-----------ch
Q 002164 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFG---FQNED-----------RT 809 (958)
Q Consensus 744 ~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~---~~~~~-----------~~ 809 (958)
.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++.......... +.... ..
T Consensus 81 ~~~~~~~------~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 4dnp_A 81 LHILDAL------GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYE 154 (269)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHhc------CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHH
Confidence 6666553 3458999999999999999999999999999999986432111100 00000 00
Q ss_pred hh-----------------h---------c-------HHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHH
Q 002164 810 LW-----------------E---------A-------TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFN 856 (958)
Q Consensus 810 ~~-----------------~---------~-------~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~ 856 (958)
.| . . ...+...+....+.++++|+|+++|++|..+| +..+.++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~ 232 (269)
T 4dnp_A 155 AWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVP--ASVATYLKN 232 (269)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBC--HHHHHHHHH
T ss_pred HHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccC--HHHHHHHHH
Confidence 00 0 0 00111223445677889999999999999998 888888887
Q ss_pred HHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 857 ALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 857 ~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
.+.. .++++++|+++|... .++...+.+.+.+||.+
T Consensus 233 ~~~~---~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 233 HLGG---KNTVHWLNIEGHLPH-LSAPTLLAQELRRALSH 268 (269)
T ss_dssp HSSS---CEEEEEEEEESSCHH-HHCHHHHHHHHHHHHC-
T ss_pred hCCC---CceEEEeCCCCCCcc-ccCHHHHHHHHHHHHhh
Confidence 7644 279999999999864 45567777788888764
No 205
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.61 E-value=5.3e-15 Score=156.77 Aligned_cols=208 Identities=13% Similarity=0.116 Sum_probs=127.8
Q ss_pred CcEEEEEEEeCC-CeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcE
Q 002164 637 LQKELIKYQRKD-GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFA 714 (958)
Q Consensus 637 ~~~~~~~~~~~d-g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~ 714 (958)
...+.+++.+.. |..+..++|+|+++++.+ ++|+|+++||+.. +..........+++ .+.+
T Consensus 11 ~~~~~~~~~S~~~~~~~~~~vylP~~y~~~~--~yPvly~l~G~~~---------------~~~~~~~~~~~l~~~~~~i 73 (278)
T 2gzs_A 11 YHFSATSFDSVDGTRHYRVWTAVPNTTAPAS--GYPILYMLDGNAV---------------MDRLDDELLKQLSEKTPPV 73 (278)
T ss_dssp EEEEEEEEECTTSSCEEEEEEEEESSCCCTT--CEEEEEESSHHHH---------------HHHCCHHHHHHHTTSCCCE
T ss_pred CceEEEEEEcCCCCceEEEEEECCCCCCCCC--CCCEEEEeeChhH---------------HHHHHHHHHHHhccCCCeE
Confidence 356778888765 678999999999987643 5999877777421 00001123345555 6777
Q ss_pred EEEcCCCCCCC-----CCCcccch-----------------hhHHHHHHHH-HHHHHHHHHcCCCCCCcEEEEEeChHHH
Q 002164 715 ILGGPTTPIIG-----EGDEEAND-----------------RFVEQLVACA-EAAVEEVVRRGVAHPSKIAVGGHSYGAF 771 (958)
Q Consensus 715 vl~~~~~~~~G-----~G~~~~~~-----------------~~~~~~~~D~-~~av~~l~~~~~~d~~~i~l~G~S~GG~ 771 (958)
|+.+++.+... ++....+. ........-+ .+.+.++.++..+|++|++|+|+||||+
T Consensus 74 vV~v~~~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~ 153 (278)
T 2gzs_A 74 IVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGL 153 (278)
T ss_dssp EEEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHH
T ss_pred EEEEcCCCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHH
Confidence 77644421100 00000000 0011111111 1334455556668888999999999999
Q ss_pred HHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCC------
Q 002164 772 MTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSG------ 845 (958)
Q Consensus 772 ~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~------ 845 (958)
+|++++.+ |++|+++++.+|...+. ...... ......+. ..-..|+++.||+.|..++
T Consensus 154 ~a~~~~~~-p~~f~~~~~~s~~~~~~---------~~~~~~---~~~~~~~~---~~~~~~i~l~~G~~d~~~~~~~~~~ 217 (278)
T 2gzs_A 154 FVLDSWLS-SSYFRSYYSASPSLGRG---------YDALLS---RVTAVEPL---QFCTKHLAIMEGSATQGDNRETHAV 217 (278)
T ss_dssp HHHHHHHH-CSSCSEEEEESGGGSTT---------HHHHHH---HHHTSCTT---TTTTCEEEEEECCC-----------
T ss_pred HHHHHHhC-ccccCeEEEeCcchhcC---------cchHHH---HHHHhhcc---CCCCCcEEEEecCccccccccchhh
Confidence 99999999 99999999999863211 000000 01111110 1124689999999997631
Q ss_pred CChHHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 002164 846 TLTMQSDRFFNALKGHGALCRLVILPFESHGY 877 (958)
Q Consensus 846 ~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~ 877 (958)
.+..++++++++|+..|+++++.++||++|..
T Consensus 218 ~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~ 249 (278)
T 2gzs_A 218 GVLSKIHTTLTILKDKGVNAVFWDFPNLGHGP 249 (278)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHH
T ss_pred hhHHHHHHHHHHHHcCCCeeEEEEcCCCCccc
Confidence 01688999999999999999999999999985
No 206
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.61 E-value=2.5e-14 Score=158.76 Aligned_cols=234 Identities=12% Similarity=0.038 Sum_probs=140.2
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCC--CCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGS--PNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G 725 (958)
+|..++...+-+++ .. ..|+||++||.+............+ ...|..... ....|+++||.|+++|.+|. +
T Consensus 29 ~g~~l~y~~~g~~~--~~---~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~~~g~~vi~~D~~G~-~ 101 (366)
T 2pl5_A 29 SPVVIAYETYGTLS--SS---KNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIG-PGKSFDTNQYFIICSNVIGG-C 101 (366)
T ss_dssp SSEEEEEEEEECCC--TT---SCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEE-TTSSEETTTCEEEEECCTTC-S
T ss_pred cCceeeEEeccCcC--CC---CCceEEEecccCCcccccccccccccccchHHhhcC-CcccccccccEEEEecCCCc-c
Confidence 45567666665432 11 1578999999753322000000000 001111000 00134578999999555431 0
Q ss_pred CCCcccc---------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEEeChHHHHHHHHHHhCCCceeEEEE
Q 002164 726 EGDEEAN---------------DRFVEQLVACAEAAVEEVVRRGVAHPSKI-AVGGHSYGAFMTANLLAHAPHLFCCGIA 789 (958)
Q Consensus 726 ~G~~~~~---------------~~~~~~~~~D~~~av~~l~~~~~~d~~~i-~l~G~S~GG~~a~~~a~~~p~~~~a~v~ 789 (958)
+|.+... ........+|+.++++.+ +.+++ .|+||||||.+++.+|.++|++++++|+
T Consensus 102 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 175 (366)
T 2pl5_A 102 KGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL------GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIV 175 (366)
T ss_dssp SSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEE
T ss_pred cCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc------CCceEEEEEEeCccHHHHHHHHHhCcHhhhheeE
Confidence 5544321 113455566666665543 34688 7999999999999999999999999999
Q ss_pred eccCCCCCCCC----------------CC---c--------------------cc----------ccc-----------h
Q 002164 790 RSGAYNRTLTP----------------FG---F--------------------QN----------EDR-----------T 809 (958)
Q Consensus 790 ~~~~~~~~~~~----------------~~---~--------------------~~----------~~~-----------~ 809 (958)
+++........ +. + .. ... .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
T 2pl5_A 176 MASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVG 255 (366)
T ss_dssp ESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSC
T ss_pred eccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHH
Confidence 98865421000 00 0 00 000 0
Q ss_pred hhh-----------cH-------HHHHhcCc------ccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcE
Q 002164 810 LWE-----------AT-------STYVEMSP------FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALC 865 (958)
Q Consensus 810 ~~~-----------~~-------~~~~~~sp------~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 865 (958)
.+. .. ..+...+. ...+.++++|+|+++|++|..+| ++.++++++.+...+..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~~~~~~ 333 (366)
T 2pl5_A 256 SYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYP--PAQSREIVKSLEAADKRV 333 (366)
T ss_dssp GGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSC--HHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccC--HHHHHHHHHHhhhcccCe
Confidence 000 00 11111111 12567889999999999999999 999999999999776678
Q ss_pred EEEEe-CCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 866 RLVIL-PFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 866 ~~~~~-p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
+++++ +++||... .+....+.+.+.+||.++
T Consensus 334 ~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 334 FYVELQSGEGHDSF-LLKNPKQIEILKGFLENP 365 (366)
T ss_dssp EEEEECCCBSSGGG-GSCCHHHHHHHHHHHHCC
T ss_pred EEEEeCCCCCcchh-hcChhHHHHHHHHHHccC
Confidence 99999 89999875 344567888888998753
No 207
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.61 E-value=3.5e-15 Score=158.54 Aligned_cols=197 Identities=10% Similarity=0.052 Sum_probs=131.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch----h--hHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND----R--FVEQLVACA 743 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~----~--~~~~~~~D~ 743 (958)
.|+||++||.+.... .|. ..+..|++ ||.|++ .+.+|+|.+.... . ......+|+
T Consensus 28 ~~~vv~lHG~~~~~~-----------~~~----~~~~~l~~-g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 88 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQN-----------MWR----FMLPELEK-QFTVIV---FDYVGSGQSDLESFSTKRYSSLEGYAKDV 88 (282)
T ss_dssp SCEEEEECCTTCCGG-----------GGT----TTHHHHHT-TSEEEE---CCCTTSTTSCGGGCCTTGGGSHHHHHHHH
T ss_pred CCeEEEECCCCCCcc-----------hHH----HHHHHHhc-CceEEE---EecCCCCCCCCCCCCccccccHHHHHHHH
Confidence 388999999642211 111 22445665 999999 6666788775432 1 245556666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccc-c--------------c
Q 002164 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNE-D--------------R 808 (958)
Q Consensus 744 ~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~-~--------------~ 808 (958)
.++++.+ +.+++.++|||+||.+++.++.++|++++++|+++|..........+... . .
T Consensus 89 ~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 3qvm_A 89 EEILVAL------DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNY 162 (282)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcch
Confidence 6665553 34689999999999999999999999999999999864321110000000 0 0
Q ss_pred hhh------------------h---------cH-------HHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHH
Q 002164 809 TLW------------------E---------AT-------STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (958)
Q Consensus 809 ~~~------------------~---------~~-------~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (958)
..| . .+ ..+...+....+.++++|+|+++|++|..+| +..+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~ 240 (282)
T 3qvm_A 163 IGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLAS--PEVGQYM 240 (282)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCC--HHHHHHH
T ss_pred hhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCC--HHHHHHH
Confidence 000 0 00 0011123335567889999999999999998 8888888
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 855 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
.+.+. ..+++++|+++|.+. .+....+.+.+.+||.+..
T Consensus 241 ~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 241 AENIP----NSQLELIQAEGHCLH-MTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHC-
T ss_pred HHhCC----CCcEEEecCCCCccc-ccCHHHHHHHHHHHHHhcC
Confidence 77664 369999999999874 4556778888999998754
No 208
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.61 E-value=2.2e-13 Score=151.05 Aligned_cols=204 Identities=12% Similarity=0.084 Sum_probs=127.7
Q ss_pred cccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCC
Q 002164 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (958)
Q Consensus 333 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~ 412 (958)
.+..++|||||++|++.+.. .++.|.+||+.+++......+. ..+..++|||||+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~-----------~d~~i~iwd~~~~~~~~~~~~~-------------~~V~~v~fspdg~~ 190 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSK-----------VPAIMRIIDPSDLTEKFEIETR-------------GEVKDLHFSTDGKV 190 (365)
T ss_dssp CEEEEEECTTSSCEEEEESC-----------SSCEEEEEETTTTEEEEEEECS-------------SCCCEEEECTTSSE
T ss_pred CEEEEEEcCCCCEEEEEECC-----------CCCEEEEeECCCCcEEEEeCCC-------------CceEEEEEccCCce
Confidence 34578999999999887632 2458999999976554322221 34578999999998
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE--eeccccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
++.. ..+.+.+|+. ..+....... .....+..++|+|||+.++..+..+.....++.++...
T Consensus 191 l~s~--------------s~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~ 254 (365)
T 4h5i_A 191 VAYI--------------TGSSLEVIST--VTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS 254 (365)
T ss_dssp EEEE--------------CSSCEEEEET--TTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET
T ss_pred EEec--------------cceeEEEEEe--ccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc
Confidence 8773 2344566663 3443332222 23445678999999999998876665445677766655
Q ss_pred CCCCcEE--EeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEe
Q 002164 491 KDVAPRI--LFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (958)
Q Consensus 491 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~ 568 (958)
....... ........+.. ++|||||++|+....+ ..|.+||+.+++...-.
T Consensus 255 ~~~~~~~~~~~~~~~~~V~~------~~~Spdg~~lasgs~D---------------------~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 255 GNTSVLRSKQVTNRFKGITS------MDVDMKGELAVLASND---------------------NSIALVKLKDLSMSKIF 307 (365)
T ss_dssp TEEEEEEEEEEESSCSCEEE------EEECTTSCEEEEEETT---------------------SCEEEEETTTTEEEEEE
T ss_pred ceecceeeeeecCCCCCeEe------EEECCCCCceEEEcCC---------------------CEEEEEECCCCcEEEEe
Confidence 3111111 12222233333 7899999999887632 24999999988765432
Q ss_pred -cCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002164 569 -ESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (958)
Q Consensus 569 -~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~ 618 (958)
..... .++ ..+|||||+.|+-... ...+.+++++.
T Consensus 308 ~~gH~~----~V~-------~v~fSpdg~~laS~S~----D~tvrvw~ip~ 343 (365)
T 4h5i_A 308 KQAHSF----AIT-------EVTISPDSTYVASVSA----ANTIHIIKLPL 343 (365)
T ss_dssp TTSSSS----CEE-------EEEECTTSCEEEEEET----TSEEEEEECCT
T ss_pred cCcccC----CEE-------EEEECCCCCEEEEEeC----CCeEEEEEcCC
Confidence 32211 122 2579999987654322 24577888754
No 209
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.60 E-value=8.3e-15 Score=172.62 Aligned_cols=221 Identities=14% Similarity=0.044 Sum_probs=148.3
Q ss_pred EEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEc
Q 002164 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (958)
Q Consensus 639 ~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~ 718 (958)
.+...++..||.+++....- ..|+||++||++.... .| ...+..|+++||.|++
T Consensus 237 ~~~~~~~~~dg~~l~~~~~g----------~~p~vv~~HG~~~~~~-----------~~----~~~~~~l~~~G~~v~~- 290 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVELG----------SGPAVCLCHGFPESWY-----------SW----RYQIPALAQAGYRVLA- 290 (555)
T ss_dssp SEEEEEEEETTEEEEEEEEC----------SSSEEEEECCTTCCGG-----------GG----TTHHHHHHHTTCEEEE-
T ss_pred cceeEEEeCCCcEEEEEEcC----------CCCEEEEEeCCCCchh-----------HH----HHHHHHHHhCCCEEEE-
Confidence 45556677799999865541 2588999999752211 11 2346678899999999
Q ss_pred CCCCCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCC
Q 002164 719 PTTPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (958)
Q Consensus 719 ~~~~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (958)
.+.+|+|.+.... ........|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++..
T Consensus 291 --~D~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 362 (555)
T 3i28_A 291 --MDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 362 (555)
T ss_dssp --ECCTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred --ecCCCCCCCCCCCCcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCC
Confidence 5556777775432 12455667777777665 34589999999999999999999999999999988754
Q ss_pred CCCCCCCCcc--------------------------------------cc-------------------------c-chh
Q 002164 795 NRTLTPFGFQ--------------------------------------NE-------------------------D-RTL 810 (958)
Q Consensus 795 ~~~~~~~~~~--------------------------------------~~-------------------------~-~~~ 810 (958)
.......... .. . ...
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (555)
T 3i28_A 363 IPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMV 442 (555)
T ss_dssp CCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTC
T ss_pred CCCCcccchHHHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCcccccccccc
Confidence 3211100000 00 0 000
Q ss_pred -hhcHHHH----------------------HhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEE
Q 002164 811 -WEATSTY----------------------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRL 867 (958)
Q Consensus 811 -~~~~~~~----------------------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~ 867 (958)
......+ ...+....+.++++|+|+++|++|..+| +..++++.+.+. .+++
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~----~~~~ 516 (555)
T 3i28_A 443 TEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWIP----HLKR 516 (555)
T ss_dssp CHHHHHHHHHHHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSC--GGGGTTGGGTCT----TCEE
T ss_pred CHHHHHHHHHHHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcC--HHHHHHHHhhCC----CceE
Confidence 0000000 0012223446789999999999999998 888887776654 3589
Q ss_pred EEeCCCCccCCCcccHHHHHHHHHHHHHHhhcc
Q 002164 868 VILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 868 ~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
+++|++||... .+....+.+.+.+||.+....
T Consensus 517 ~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~~~~ 548 (555)
T 3i28_A 517 GHIEDCGHWTQ-MDKPTEVNQILIKWLDSDARN 548 (555)
T ss_dssp EEETTCCSCHH-HHSHHHHHHHHHHHHHHHTCC
T ss_pred EEeCCCCCCcc-hhCHHHHHHHHHHHHHhccCC
Confidence 99999999864 456678888999999988643
No 210
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.60 E-value=2.1e-13 Score=145.07 Aligned_cols=256 Identities=11% Similarity=0.063 Sum_probs=175.0
Q ss_pred ceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCcccc
Q 002164 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNF 193 (958)
Q Consensus 114 ~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~ 193 (958)
--|+.||++|.|.... +. ..||..+. || ...++|+. ...
T Consensus 19 g~~~~~g~~iy~~n~~----------------------d~---------~~ly~~~~--dg--~~~~~l~~------~~~ 57 (302)
T 3s25_A 19 GLFCESDGEVFFSNTN----------------------DN---------GRLYAMNI--DG--SNIHKLSN------DTA 57 (302)
T ss_dssp TCEEEETTEEEEEEGG----------------------GT---------TEEEEEET--TS--CSCEEEEE------EEE
T ss_pred eEEEEeCCEEEEEeCC----------------------CC---------ceEEEEcC--CC--CCCEEccC------Cce
Confidence 3478999999998752 11 26777766 55 56677753 123
Q ss_pred eeecCCCCeEEEEEeeccccCC-----CCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002164 194 VTWSQDGKHLAFSIRIDAEDSS-----SSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~-----~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
--+++||++|+|+......... .....||+++++|++.++|+... ...|+++|++|+|+...
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~---------~~~~s~~g~~Iy~~~~~---- 124 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP---------CIYASLIGNYIYYLHYD---- 124 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC---------EEEEEEETTEEEEEEES----
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC---------ccEEEEeCCEEEEEeec----
Confidence 4568999999999753310000 12568999999999888886432 23689999999998200
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcC-CeeeecCCCccccccccCCCCcEEE
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLD-GTVKEIGPPAVYTSLDPSPDEKYIL 347 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~l~~~~~~~~~~~SpDGk~l~ 347 (958)
.. ....||+++++ ...++|+.... ..++|||++|+
T Consensus 125 ---------------~~--------------------------~~~~Iy~~~~dGs~~~~lt~~~~---~~~~~~g~~iy 160 (302)
T 3s25_A 125 ---------------TQ--------------------------TATSLYRIRIDGEEKKKIKNHYL---FTCNTSDRYFY 160 (302)
T ss_dssp ---------------SS--------------------------SCEEEEEEETTSCCCEEEESSCC---CCSEEETTEEE
T ss_pred ---------------CC--------------------------CCceEEEEECCCCCeEEEeCCCc---eEeeEECCEEE
Confidence 00 34679999994 46777776522 56799999999
Q ss_pred EEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc
Q 002164 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (958)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~ 427 (958)
|+... ..+|++.+++|+..++|...+ ....++|+|+.|+|. +.
T Consensus 161 ~t~~g------------~~~Iy~~~l~g~~~~~l~~~~----------------~~~~~~P~g~~iy~t-~~-------- 203 (302)
T 3s25_A 161 YNNPK------------NGQLYRYDTASQSEALFYDCN----------------CYKPVVLDDTNVYYM-DV-------- 203 (302)
T ss_dssp EECTT------------TCCEEEEETTTTEEEEEECSC----------------EEEEEEEETTEEEEE-EG--------
T ss_pred EEeCC------------CceEEEEECCCCCEEEEeCCC----------------ccceeeecCCEEEEE-Ec--------
Confidence 99752 238999999998888775421 112356999999874 21
Q ss_pred ccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCcccc
Q 002164 428 EVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVY 507 (958)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 507 (958)
.....|++.++ +|+..+.|+.... +.|+|+|++|+|...... ..|+.+++++. ..+.+.... .
T Consensus 204 --~~~~~I~~~~l---dG~~~~~Lt~~~~----~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~--~r~~l~~~~--~-- 266 (302)
T 3s25_A 204 --NRDNAIVHVNI---NNPNPVVLTEANI----EHYNVYGSLIFYQRGGDN--PALCVVKNDGT--GFKELAKGE--F-- 266 (302)
T ss_dssp --GGTTEEEEECS---SSCCCEECSCSCE----EEEEEETTEEEEEECSSS--CEEEEEETTSC--CCEEEEESC--E--
T ss_pred --CCCcEEEEEEC---CCCCeEEEeCCCc----ceEEECCCEEEEEECCCC--cEEEEEECCCC--ccEEeeCCc--c--
Confidence 12247999985 8888888864332 669999999999865544 68999999995 334444321 1
Q ss_pred CCCCCCceEeccCCceEEEEe
Q 002164 508 SDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 508 ~~~~~~~~~~spdG~~l~~~~ 528 (958)
...++.|.+|+|..
T Consensus 267 -------~~i~i~~d~Iy~td 280 (302)
T 3s25_A 267 -------CNINVTSQYVYFTD 280 (302)
T ss_dssp -------EEEEECSSEEEEEE
T ss_pred -------ceEEEeCCEEEEEE
Confidence 34677888888875
No 211
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.60 E-value=3.3e-13 Score=148.17 Aligned_cols=273 Identities=11% Similarity=0.099 Sum_probs=170.9
Q ss_pred eeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEE
Q 002164 179 EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (958)
Q Consensus 179 ~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l 258 (958)
.+.+.++. ..+....|||||+.|+.... ...|.+|++.+++........... +..++|+|||+.|
T Consensus 48 ~~~l~gH~--~~v~~~~~s~d~~~l~s~s~---------Dg~v~iWd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l 112 (340)
T 1got_B 48 RRTLRGHL--AKIYAMHWGTDSRLLLSASQ---------DGKLIIWDSYTTNKVHAIPLRSSW----VMTCAYAPSGNYV 112 (340)
T ss_dssp EEEECCCS--SCEEEEEECTTSSEEEEEET---------TTEEEEEETTTCCEEEEEECSSSC----EEEEEECTTSSEE
T ss_pred heeecCCC--CceEEEEECCCCCEEEEEeC---------CCcEEEEECCCCCcceEeecCCcc----EEEEEECCCCCEE
Confidence 34454433 56889999999999887552 568999998887655443333322 6789999999999
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-----eeecCCC-
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-----VKEIGPP- 331 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-----~~~l~~~- 331 (958)
+... ....+.++++ +++ .+.+...
T Consensus 113 ~s~~-------------------------------------------------~d~~v~iw~~~~~~~~~~~~~~~~~h~ 143 (340)
T 1got_B 113 ACGG-------------------------------------------------LDNICSIYNLKTREGNVRVSRELAGHT 143 (340)
T ss_dssp EEEE-------------------------------------------------TTCEEEEEETTTCSBSCEEEEEEECCS
T ss_pred EEEe-------------------------------------------------CCCeEEEEECccCCCcceeEEEecCCC
Confidence 8762 1233555665 331 1223333
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcccccccccCcceeeeecCC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG 410 (958)
..+....|+||++ |+..+. ++.+.+||+.++... .+..+ ...+..+.|+|||
T Consensus 144 ~~v~~~~~~~~~~-l~s~s~-------------d~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~ 196 (340)
T 1got_B 144 GYLSCCRFLDDNQ-IVTSSG-------------DTTCALWDIETGQQTTTFTGH-------------TGDVMSLSLAPDT 196 (340)
T ss_dssp SCEEEEEEEETTE-EEEEET-------------TSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTS
T ss_pred ccEEEEEECCCCc-EEEEEC-------------CCcEEEEECCCCcEEEEEcCC-------------CCceEEEEECCCC
Confidence 5677788999887 444442 348999999865543 33222 1345789999999
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 411 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
+.++.. +..+.|.+||+ ..+.....+..+...+..+.|+|+|+.|+..+.++. .++| |+..
T Consensus 197 ~~l~sg-------------~~d~~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~--v~iw--d~~~ 257 (340)
T 1got_B 197 RLFVSG-------------ACDASAKLWDV--REGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT--CRLF--DLRA 257 (340)
T ss_dssp SEEEEE-------------ETTSCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEE--ETTT
T ss_pred CEEEEE-------------eCCCcEEEEEC--CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc--EEEE--ECCC
Confidence 876652 44567899996 233334445556667888999999999887765443 4444 5544
Q ss_pred CCCCcEEEeccC--CccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEe
Q 002164 491 KDVAPRILFDRS--SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (958)
Q Consensus 491 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~ 568 (958)
+ +........ ...+.. ++|+|||++|+....+ ..|.+||+.+++.....
T Consensus 258 ~--~~~~~~~~~~~~~~v~~------~~~s~~g~~l~~g~~d---------------------~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 258 D--QELMTYSHDNIICGITS------VSFSKSGRLLLAGYDD---------------------FNCNVWDALKADRAGVL 308 (340)
T ss_dssp T--EEEEEECCTTCCSCEEE------EEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEE
T ss_pred C--cEEEEEccCCcccceEE------EEECCCCCEEEEECCC---------------------CeEEEEEcccCcEeeEe
Confidence 3 222222211 111222 7899999998877621 25999999887765544
Q ss_pred cCCcccccceeEeecCCCccccccccCCEEEEE
Q 002164 569 ESDKEKYYETTVALMSDQTEGDLYLNQLKILTS 601 (958)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 601 (958)
..... .+. ..+|++||..++..
T Consensus 309 ~~h~~----~v~-------~~~~s~dg~~l~s~ 330 (340)
T 1got_B 309 AGHDN----RVS-------CLGVTDDGMAVATG 330 (340)
T ss_dssp ECCSS----CEE-------EEEECTTSSCEEEE
T ss_pred ecCCC----cEE-------EEEEcCCCCEEEEE
Confidence 33221 122 24688888766543
No 212
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.60 E-value=1.1e-13 Score=168.07 Aligned_cols=264 Identities=9% Similarity=-0.017 Sum_probs=163.3
Q ss_pred cccceeec-CCCCeEEEEEeeccccCCCCCceEEEEEcCCC-ceeeccCCCCccccccccceEEecCCeEEEEEecCCCC
Q 002164 190 KLNFVTWS-QDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (958)
Q Consensus 190 ~~~~~~wS-PDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g-~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (958)
....++|| |||++|||+.+.. ++...+||++++++| +. +... +......++|||||+.|+|+..+...
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~----G~~~~~l~v~dl~~g~~~--l~~~----~~~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMS----GNEVYTIEFKRISDPSQT--IADK----VSGTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESS----SSSCEEEEEEETTCTTCC--CCCC----EEEECSCCEECSSTTEEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCC----CCceEEEEEEECCCCCEe--CCcc----ccCceeeEEEecCCCEEEEEEECCCC
Confidence 46779999 9999999988632 344567999999998 62 2110 11114589999999999988321100
Q ss_pred CCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--eeecCC--C-ccccccccCC
Q 002164 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGP--P-AVYTSLDPSP 341 (958)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--~~~l~~--~-~~~~~~~~Sp 341 (958)
...+||++++ ++. .+.+.. . .....+.|||
T Consensus 245 --------------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp 280 (751)
T 2xe4_A 245 --------------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA 280 (751)
T ss_dssp --------------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT
T ss_pred --------------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC
Confidence 1247999999 653 234422 1 3345789999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCc--eE--EEeccCCccccCcccccccccCcceeeeecC---CCCce
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FV--RELCDLPLAEDIPIAFNSVRKGMRSINWRSD---KPSTL 414 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~--~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~~spD---G~~l~ 414 (958)
||++|++.+... ...+++++|++++ .. +.|+... ....|++| |+.|+
T Consensus 281 Dg~~l~~~~~~~----------~~~~l~~~d~~~~~~~~~~~~l~~~~----------------~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 281 DTNTLCIGSQSP----------ETAEVHLLDLRKGNAHNTLEIVRPRE----------------KGVRYDVQMHGTSHLV 334 (751)
T ss_dssp TSSEEEEEEECS----------SCEEEEEEESSSCTTCCCEEESSCCC----------------TTCCEEEEEETTTEEE
T ss_pred CCCEEEEEecCC----------CCceEEEEECCCCCCCceeEEeecCC----------------CCceEEEeeeeCCEEE
Confidence 999999998542 2358999999864 34 4444311 23446676 99888
Q ss_pred EEEEeccCCCcccccccCCeEEEEeCCCCCC-CCceE-EEeeccccCceeeecCCceEEEEEeccccceEEEEEcC----
Q 002164 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQG-EGPEI-LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP---- 488 (958)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g-~~~~~-l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~---- 488 (958)
|.++.. + ..+..||++++ ++ +..+. +......+.-..|+++++.|++....++. .+|+++++
T Consensus 335 ~~t~~~-~-------a~~~~L~~~d~---~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~-~~l~~~dl~~~~ 402 (751)
T 2xe4_A 335 ILTNEG-G-------AVNHKLLIAPR---GQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGL-TRIWTMMADSQD 402 (751)
T ss_dssp EEECTT-T-------CTTCEEEEEET---TSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTE-EEEEEEECCTTT
T ss_pred EEeCCC-C-------CCCcEEEEEcC---CCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCE-EEEEEEeccccc
Confidence 875432 0 23457999985 43 34444 44433333333466678889888776653 78999996
Q ss_pred ---CCCCCC-cEEEe-ccCCccccCCCCCCceEe----ccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEEC
Q 002164 489 ---GSKDVA-PRILF-DRSSEDVYSDPGSPMMRR----TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDI 559 (958)
Q Consensus 489 ---~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~----spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl 559 (958)
+++ + ...+. ..... ..+ +.+ ++|++.++|..... ...+.+|.+|+
T Consensus 403 ~~~~~g--~~~~~l~l~~~~~-~~~------~~~~~~~~~~~~~l~~~~ss~-----------------~~P~~~~~~d~ 456 (751)
T 2xe4_A 403 GVFKAG--TGLREVVMEEPIF-TVH------LVESQMLEYEEPTFRMEYSSL-----------------ATPNTWFDVSP 456 (751)
T ss_dssp SCCCTT--TCCEECCCCCSSC-EEE------ECGGGCCCTTCSCEEEEEEET-----------------TEEEEEEEECT
T ss_pred ccccCC--ccceEECCCCcee-EEE------eccCcccCCCCCEEEEEEeCC-----------------CCCCEEEEEEC
Confidence 342 2 23331 11110 001 222 46887777776321 12346999999
Q ss_pred CCCceEEEecCC
Q 002164 560 NTGSKERIWESD 571 (958)
Q Consensus 560 ~~g~~~~l~~~~ 571 (958)
.+++.+.|+...
T Consensus 457 ~~~~~~~l~~~~ 468 (751)
T 2xe4_A 457 QDHSRTAVKVRE 468 (751)
T ss_dssp TTCCEEEEEECC
T ss_pred CCCcEEEEeccc
Confidence 999888777543
No 213
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.60 E-value=1.9e-13 Score=152.74 Aligned_cols=275 Identities=13% Similarity=0.098 Sum_probs=167.5
Q ss_pred CCCCceecCCC-CEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCC
Q 002164 110 PLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDG 188 (958)
Q Consensus 110 ~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~ 188 (958)
.+..++||||| ++|+....+ +.|.+|++.. + .....+......
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~d---------------------------------g~i~iwd~~~-~--~~~~~~~~~~h~ 118 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKG---------------------------------GDIILWDYDV-Q--NKTSFIQGMGPG 118 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBT---------------------------------SCEEEEETTS-T--TCEEEECCCSTT
T ss_pred CEEEEEECCCCCCEEEEEcCC---------------------------------CeEEEEeCCC-c--ccceeeecCCcC
Confidence 46678999999 888887765 4789999964 2 122233211233
Q ss_pred CcccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCC
Q 002164 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (958)
Q Consensus 189 ~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (958)
..+....|+| |++.|+... ....|.+|++.++....+..... ....+..++|+||++.|+...
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~----- 182 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSS---------IRGATTLRDFSGSVIQVFAKTDS--WDYWYCCVDVSVSRQMLATGD----- 182 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEE---------TTTEEEEEETTSCEEEEEECCCC--SSCCEEEEEEETTTTEEEEEE-----
T ss_pred CceeEEEeCCCCCCEEEEEe---------CCCEEEEEECCCCceEEEeccCC--CCCCeEEEEECCCCCEEEEEC-----
Confidence 5789999999 666666644 25688999998866655543332 112267899999999988761
Q ss_pred CCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCCCCc-
Q 002164 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEK- 344 (958)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk- 344 (958)
....|.++++ ......+... ..+..++|+|||+
T Consensus 183 --------------------------------------------~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 183 --------------------------------------------STGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp --------------------------------------------TTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTT
T ss_pred --------------------------------------------CCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCC
Confidence 2345778888 4455555544 7788999999999
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccC----ceEEEeccCCccccCcccccccccCcceeeeec-CCCCceEEEEe
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYWAET 419 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~----~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp-DG~~l~~~~~~ 419 (958)
.|+..+. ++.|.+||+.. +....... ....+..+.|+| ||+.|+..
T Consensus 219 ~l~s~~~-------------d~~i~iwd~~~~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~~l~~~--- 269 (383)
T 3ei3_B 219 LMATSSV-------------DATVKLWDLRNIKDKNSYIAEMP-------------HEKPVNAAYFNPTDSTKLLTT--- 269 (383)
T ss_dssp EEEEEET-------------TSEEEEEEGGGCCSTTCEEEEEE-------------CSSCEEEEEECTTTSCEEEEE---
T ss_pred EEEEEeC-------------CCEEEEEeCCCCCcccceEEEec-------------CCCceEEEEEcCCCCCEEEEE---
Confidence 5554442 34899999985 22221111 114557899999 99988763
Q ss_pred ccCCCcccccccCCeEEEEeCCCCCCCCceEEEeecc------ccCceeeecCCceEEEEEecc-----ccceEEEEEcC
Q 002164 420 QDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYESWYK-----TRRTRTWVISP 488 (958)
Q Consensus 420 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~------~~~~~~~spDg~~l~~~~~~~-----~~~~~l~~~~~ 488 (958)
+..+.|.+|++ ..+.....+..... ......|+|++..++.....+ .....|+++++
T Consensus 270 ----------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 270 ----------DQRNEIRVYSS--YDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDA 337 (383)
T ss_dssp ----------ESSSEEEEEET--TBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEET
T ss_pred ----------cCCCcEEEEEC--CCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEec
Confidence 44568999996 33444455543221 111245666665554432110 01134666676
Q ss_pred CCCCCCcEEEeccCC-ccccCCCCCCceEeccCCceEEEEe
Q 002164 489 GSKDVAPRILFDRSS-EDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 489 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
.++ +......... ..... .++|+|||++|+...
T Consensus 338 ~~~--~~~~~l~~~~~~~~~~-----~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 338 NSG--GLVHQLRDPNAAGIIS-----LNKFSPTGDVLASGM 371 (383)
T ss_dssp TTC--CEEEEECBTTBCSCCC-----EEEECTTSSEEEEEE
T ss_pred CCC--ceeeeecCCCCCceEE-----EEEEecCccEEEEec
Confidence 664 2233332211 11111 148999999887764
No 214
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.60 E-value=8.5e-15 Score=156.88 Aligned_cols=197 Identities=16% Similarity=0.143 Sum_probs=132.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchh-hHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR-FVEQLVACAEAAVE 748 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~-~~~~~~~D~~~av~ 748 (958)
.|+||++||.+.... .| .......|+++||.|++ .+.+|+|.+..... ......+|+.++++
T Consensus 43 ~~~vv~lHG~~~~~~-----------~~---~~~~~~~l~~~g~~vi~---~D~~G~G~s~~~~~~~~~~~~~~~~~~l~ 105 (293)
T 3hss_A 43 GDPVVFIAGRGGAGR-----------TW---HPHQVPAFLAAGYRCIT---FDNRGIGATENAEGFTTQTMVADTAALIE 105 (293)
T ss_dssp SEEEEEECCTTCCGG-----------GG---TTTTHHHHHHTTEEEEE---ECCTTSGGGTTCCSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchh-----------hc---chhhhhhHhhcCCeEEE---EccCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 578999999643211 11 11235578899999999 55567776654332 34566777777777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCC--------------Ccccc--------
Q 002164 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF--------------GFQNE-------- 806 (958)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~--------------~~~~~-------- 806 (958)
.+ +.+++.++|||+||.+++.++.++|++++++|++++......... .....
T Consensus 106 ~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (293)
T 3hss_A 106 TL------DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLL 179 (293)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hc------CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHh
Confidence 65 335899999999999999999999999999999998654211000 00000
Q ss_pred ---cchhhhcH---H---------------H-------HHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHH
Q 002164 807 ---DRTLWEAT---S---------------T-------YVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNAL 858 (958)
Q Consensus 807 ---~~~~~~~~---~---------------~-------~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l 858 (958)
........ . . ....+....+.++++|+|+++|++|..+| +..+.++.+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~ 257 (293)
T 3hss_A 180 ENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTP--PYLGREVADAL 257 (293)
T ss_dssp HHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSC--HHHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCC--HHHHHHHHHHC
Confidence 00000000 0 0 00112233457789999999999999998 88888887776
Q ss_pred HhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 859 KGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 859 ~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
+ .++++++|++||... .++...+.+.+.+||++
T Consensus 258 ~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 258 P----NGRYLQIPDAGHLGF-FERPEAVNTAMLKFFAS 290 (293)
T ss_dssp T----TEEEEEETTCCTTHH-HHSHHHHHHHHHHHHHT
T ss_pred C----CceEEEeCCCcchHh-hhCHHHHHHHHHHHHHh
Confidence 4 369999999999863 45567778888888875
No 215
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.60 E-value=6.2e-14 Score=155.87 Aligned_cols=249 Identities=15% Similarity=0.137 Sum_probs=150.6
Q ss_pred cEEEEEEEeCC--Ce--EEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcc--cCCcccCCCC-CC--C-CcCcHHHHH
Q 002164 638 QKELIKYQRKD--GV--QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKD--AAGQVRGSPN-EF--P-RIGSTSVLL 707 (958)
Q Consensus 638 ~~~~~~~~~~d--g~--~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~--~~~~~~~~~~-~~--~-~~~~~~~~~ 707 (958)
...++.|.+.| |. ...+.++.|.+.. .+.|+|.|.||....... +......+.. .. . .+.......
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~----~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~ 149 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPA----SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIG 149 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCC----SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCC----CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHH
Confidence 55677776654 44 3889999998732 248999999995321100 0000000000 00 0 111133556
Q ss_pred H-HHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----CC
Q 002164 708 W-LARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA----PH 782 (958)
Q Consensus 708 l-a~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~----p~ 782 (958)
| +++||+|+. .|+.|.|............+.|..+++..+. +.-...+++++|||+||..+++++... |+
T Consensus 150 ~~l~~G~~Vv~---~Dy~G~G~~y~~~~~~~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~yape 224 (462)
T 3guu_A 150 WALQQGYYVVS---SDHEGFKAAFIAGYEEGMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAESYAPE 224 (462)
T ss_dssp HHHHTTCEEEE---ECTTTTTTCTTCHHHHHHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTT
T ss_pred HHHhCCCEEEE---ecCCCCCCcccCCcchhHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChhhcCc
Confidence 7 999999999 5556666654333222233334444443332 222247999999999999999988754 33
Q ss_pred -ceeEEEEeccCCCCCCC-------CC---------C----c-----------ccc----------c-------------
Q 002164 783 -LFCCGIARSGAYNRTLT-------PF---------G----F-----------QNE----------D------------- 807 (958)
Q Consensus 783 -~~~a~v~~~~~~~~~~~-------~~---------~----~-----------~~~----------~------------- 807 (958)
.++++++.++++|.... .+ + + ... .
T Consensus 225 l~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~ 304 (462)
T 3guu_A 225 LNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPF 304 (462)
T ss_dssp SEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTT
T ss_pred cceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhcc
Confidence 58888888876552100 00 0 0 000 0
Q ss_pred ---------chhhhcH---HHHHhcCccc-----ccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEe
Q 002164 808 ---------RTLWEAT---STYVEMSPFM-----SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVIL 870 (958)
Q Consensus 808 ---------~~~~~~~---~~~~~~sp~~-----~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~ 870 (958)
..+...+ +.+.+..... ...+.++|+||+||.+|.+|| +.++++++++++..|.++++..|
T Consensus 305 ~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP--~~~s~~l~~~l~~~G~~V~~~~y 382 (462)
T 3guu_A 305 LNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVP--YQPAATYVKEQCAKGANINFSPY 382 (462)
T ss_dssp CCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSC--HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCC--HHHHHHHHHHHHHcCCCeEEEEE
Confidence 0000000 1111111100 123567899999999999999 99999999999999999999999
Q ss_pred CCCCccCCCcccHHHHHHHHHHHHHHhhccC
Q 002164 871 PFESHGYAARESIMHVLWETDRWLQKYCVSN 901 (958)
Q Consensus 871 p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 901 (958)
++++|..... ..+..+++||.+++.+.
T Consensus 383 ~~~~H~~~~~----~~~~d~l~WL~~r~~G~ 409 (462)
T 3guu_A 383 PIAEHLTAEI----FGLVPSLWFIKQAFDGT 409 (462)
T ss_dssp SSCCHHHHHH----HTHHHHHHHHHHHHHTC
T ss_pred CcCCccCchh----hhHHHHHHHHHHHhCCC
Confidence 9999987422 23678899999999764
No 216
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.60 E-value=3.4e-13 Score=147.34 Aligned_cols=275 Identities=11% Similarity=0.031 Sum_probs=169.4
Q ss_pred CceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhh
Q 002164 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (958)
Q Consensus 218 ~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (958)
...|+++|+.+++.......+... .....++|+|||+.++++..
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~---------------------------------- 53 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAG--PTPMVPMVAPGGRIAYATVN---------------------------------- 53 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCT--TCCCCEEECTTSSEEEEEET----------------------------------
T ss_pred CCeEEEEECCCCcEEEEEEcCCCC--CCccceEEcCCCCEEEEEeC----------------------------------
Confidence 568999999988776544433310 00458999999988887610
Q ss_pred hccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCCc------cccccccCCCCcEEEEEeecCCccccccCCC--CCce
Q 002164 298 LLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPA------VYTSLDPSPDEKYILISSIHRPYSFIVPCGR--FPRQ 367 (958)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~~------~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~--~~~~ 367 (958)
....|+++++ +|+.. .+.... ....++|||||++|++....... .+... ..+.
T Consensus 54 --------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~---~~~~~~~~~~~ 116 (337)
T 1pby_B 54 --------------KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL---ELTHFEVQPTR 116 (337)
T ss_dssp --------------TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE---CSSCEEECCCE
T ss_pred --------------CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccc---ccccccccCce
Confidence 2246889998 77543 333222 56788999999999988532100 00000 1358
Q ss_pred eEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC
Q 002164 368 VGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG 447 (958)
Q Consensus 368 i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 447 (958)
|++||+++++........ ..+..+.|+|||+.+++. .+.|+++++ .+++
T Consensus 117 i~v~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~l~~~---------------~~~i~~~d~---~~~~ 165 (337)
T 1pby_B 117 VALYDAETLSRRKAFEAP-------------RQITMLAWARDGSKLYGL---------------GRDLHVMDP---EAGT 165 (337)
T ss_dssp EEEEETTTTEEEEEEECC-------------SSCCCEEECTTSSCEEEE---------------SSSEEEEET---TTTE
T ss_pred EEEEECCCCcEEEEEeCC-------------CCcceeEECCCCCEEEEe---------------CCeEEEEEC---CCCc
Confidence 999999876544322211 234678899999998873 246899995 4444
Q ss_pred ceEEEeeccccCceeeecCCceEEEEEecccc--------------------ceEEEEEcCCCCCCCcEEE-eccCCccc
Q 002164 448 PEILHKLDLRYGGISWCDDSLALVYESWYKTR--------------------RTRTWVISPGSKDVAPRIL-FDRSSEDV 506 (958)
Q Consensus 448 ~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~--------------------~~~l~~~~~~~~~~~~~~~-~~~~~~~~ 506 (958)
.............+.|+|||+.|++....... ...|+++++.++. ...+ ........
T Consensus 166 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~ 243 (337)
T 1pby_B 166 LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE--MAMREVRIMDVFY 243 (337)
T ss_dssp EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC--EEEEEEEECSSCE
T ss_pred EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC--ceEeecCCCCCce
Confidence 33322222222456899999988665422211 0157888988753 2211 11111111
Q ss_pred cCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCC
Q 002164 507 YSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQ 586 (958)
Q Consensus 507 ~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~ 586 (958)
.+ +.|+|||++|+... ..|++||+++++.......... +
T Consensus 244 ~~------~~~s~dg~~l~~~~-----------------------~~v~~~d~~~~~~~~~~~~~~~-----~------- 282 (337)
T 1pby_B 244 FS------TAVNPAKTRAFGAY-----------------------NVLESFDLEKNASIKRVPLPHS-----Y------- 282 (337)
T ss_dssp EE------EEECTTSSEEEEEE-----------------------SEEEEEETTTTEEEEEEECSSC-----C-------
T ss_pred ee------EEECCCCCEEEEeC-----------------------CeEEEEECCCCcCcceecCCCc-----e-------
Confidence 11 78999999887662 1599999998877655443321 1
Q ss_pred ccccccccCCEEEEEEecCCCCceEEEEECCCCCeeE
Q 002164 587 TEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQ 623 (958)
Q Consensus 587 ~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~ 623 (958)
...+|++||+.+++.. ....++++++.+++...
T Consensus 283 ~~~~~s~dg~~l~~~~----~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGG----ALGDLAAYDAETLEKKG 315 (337)
T ss_dssp CEEEECTTSCEEEEES----BSSEEEEEETTTCCEEE
T ss_pred eeEEECCCCCEEEEEc----CCCcEEEEECcCCcEEE
Confidence 1357899999777752 24679999998887554
No 217
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.60 E-value=2.9e-13 Score=151.90 Aligned_cols=253 Identities=13% Similarity=0.137 Sum_probs=156.5
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcc--------------ccccccceEEecC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY--------------LNAIFDNFVWVNN 254 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~--------------~~~~~~~~~wspD 254 (958)
..+...+|||||++||... ...+.+|++.+|+........... ....+..++|+||
T Consensus 65 ~~V~~v~fspdg~~la~g~----------~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC----------NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC----------BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CEEEEEEECCCCCEEEEEc----------CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 4688899999999998843 235677788777654322111100 0011568899999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-
Q 002164 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP- 331 (958)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~- 331 (958)
|+.|+... ....|.++++ +++.. .+...
T Consensus 135 g~~l~s~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~h~ 165 (393)
T 1erj_A 135 GKFLATGA-------------------------------------------------EDRLIRIWDIENRKIVMILQGHE 165 (393)
T ss_dssp SSEEEEEE-------------------------------------------------TTSCEEEEETTTTEEEEEECCCS
T ss_pred CCEEEEEc-------------------------------------------------CCCeEEEEECCCCcEEEEEccCC
Confidence 99998762 1245778888 67544 34434
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeec-CC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DK 410 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp-DG 410 (958)
..+..++|+|||++|+..+.+ +.+.+||+.++......... ..+..+.|+| ||
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d-------------~~v~iwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 219 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGD-------------RTVRIWDLRTGQCSLTLSIE-------------DGVTTVAVSPGDG 219 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEECSTTC
T ss_pred CCEEEEEEcCCCCEEEEecCC-------------CcEEEEECCCCeeEEEEEcC-------------CCcEEEEEECCCC
Confidence 678899999999999877633 48999999876543322211 3456789999 88
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEE-------EeeccccCceeeecCCceEEEEEeccccceEE
Q 002164 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL-------HKLDLRYGGISWCDDSLALVYESWYKTRRTRT 483 (958)
Q Consensus 411 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l-------~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l 483 (958)
+.++.. +..+.|.+||. ..+.....+ ..+...+..+.|+|||+.|+..+.++. .+|
T Consensus 220 ~~l~~~-------------s~d~~v~iwd~--~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~--v~~ 282 (393)
T 1erj_A 220 KYIAAG-------------SLDRAVRVWDS--ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS--VKL 282 (393)
T ss_dssp CEEEEE-------------ETTSCEEEEET--TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE--EEE
T ss_pred CEEEEE-------------cCCCcEEEEEC--CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE--EEE
Confidence 877662 44567888985 223222333 123445677999999999887654433 555
Q ss_pred EEEcCCCCC--------CCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEE
Q 002164 484 WVISPGSKD--------VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (958)
Q Consensus 484 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 555 (958)
|.+...... .............+.. +.|+|+|++|+....+ ..|+
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~------~~~~~~~~~l~sgs~D---------------------~~v~ 335 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS------VATTQNDEYILSGSKD---------------------RGVL 335 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEE------EEECGGGCEEEEEETT---------------------SEEE
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEE------EEECCCCCEEEEEeCC---------------------CeEE
Confidence 554321100 0111122222222333 7799999988876521 2599
Q ss_pred EEECCCCceEEEecC
Q 002164 556 LFDINTGSKERIWES 570 (958)
Q Consensus 556 ~~dl~~g~~~~l~~~ 570 (958)
+||+.+++.......
T Consensus 336 iwd~~~~~~~~~l~~ 350 (393)
T 1erj_A 336 FWDKKSGNPLLMLQG 350 (393)
T ss_dssp EEETTTCCEEEEEEC
T ss_pred EEECCCCeEEEEECC
Confidence 999998887655543
No 218
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.60 E-value=8.1e-14 Score=153.77 Aligned_cols=275 Identities=7% Similarity=-0.002 Sum_probs=165.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||+.++.+... ..+ ++.|.+|++.. +....+.......
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~---------------------~~~--------d~~v~iw~~~~----~~~~~~~~~~~~~ 66 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNF---------------------ARG--------TGVIQLYEIQH----GDLKLLREIEKAK 66 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC-----------------------CC--------CEEEEEEEECS----SSEEEEEEEEESS
T ss_pred ceEEEEEcCCCceEEEecCc---------------------cCC--------CcEEEEEeCCC----CcccceeeecccC
Confidence 56788999999888766531 000 14799999965 3333222122334
Q ss_pred cccceeecCC---CCeEEEEEeeccccCCCCCceEEEEEcCCCc-eeeccCCCCccccccccce------EEecCCeEEE
Q 002164 190 KLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-ARPLFQSPDIYLNAIFDNF------VWVNNSTLLV 259 (958)
Q Consensus 190 ~~~~~~wSPD---G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~-~~~lt~~~~~~~~~~~~~~------~wspDG~~l~ 259 (958)
.+....|+|| |+.|+... ....|.+|++.+++ ........... +..+ +|+|||+.|+
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~s~~~~~l~ 133 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGD---------FGGNLHIWNLEAPEMPVYSVKGHKEI----INAIDGIGGLGIGEGAPEIV 133 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEE---------TTSCEEEECTTSCSSCSEEECCCSSC----EEEEEEESGGGCC-CCCEEE
T ss_pred cEEEEEEcCCCCCCceEEEec---------CCCeEEEEeCCCCCccEEEEEecccc----eEEEeeccccccCCCccEEE
Confidence 7899999999 68888754 25678999998876 33222222222 4555 4678999988
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--eeecCCC-----
Q 002164 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP----- 331 (958)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--~~~l~~~----- 331 (958)
... ....|.++++ +++ ...+...
T Consensus 134 ~~~-------------------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 134 TGS-------------------------------------------------RDGTVKVWDPRQKDDPVANMEPVQGENK 164 (357)
T ss_dssp EEE-------------------------------------------------TTSCEEEECTTSCSSCSEEECCCTTSCC
T ss_pred EEe-------------------------------------------------CCCeEEEEeCCCCCCcceeccccCCCCC
Confidence 762 1234667777 443 3333321
Q ss_pred ccccccc----cCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeee
Q 002164 332 AVYTSLD----PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (958)
Q Consensus 332 ~~~~~~~----~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~s 407 (958)
..+..+. |+|||+.|+....+ +.+.+||+.++.......+. ..+..+.|+
T Consensus 165 ~~v~~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~-------------~~v~~~~~~ 218 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEERVVCAGYDN-------------GDIKLFDLRNMALRWETNIK-------------NGVCSLEFD 218 (357)
T ss_dssp CCEEEEEEECCCC-CCCEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEES
T ss_pred CceEEEEEEeccCCCCCEEEEEccC-------------CeEEEEECccCceeeecCCC-------------CceEEEEcC
Confidence 1344444 89999999988743 48999999977654433221 345789999
Q ss_pred c---CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE-----eeccccCceeeecCCceEEEEEecccc
Q 002164 408 S---DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH-----KLDLRYGGISWCDDSLALVYESWYKTR 479 (958)
Q Consensus 408 p---DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~-----~~~~~~~~~~~spDg~~l~~~~~~~~~ 479 (958)
| +|+.++.. +..+.|++|++ ..+.....+. .....+..+.|+|+|+.++++...++
T Consensus 219 ~~~~~~~~l~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg- 282 (357)
T 3i2n_A 219 RKDISMNKLVAT-------------SLEGKFHVFDM--RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG- 282 (357)
T ss_dssp CSSSSCCEEEEE-------------ESTTEEEEEEE--EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-
T ss_pred CCCCCCCEEEEE-------------CCCCeEEEEeC--cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC-
Confidence 9 88887763 34567888885 2222233332 45666788999999995555544443
Q ss_pred ceEEEEEcCCCCCC---------------CcEEEeccCCccccCCCCCCceEeccCCceEEEE
Q 002164 480 RTRTWVISPGSKDV---------------APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAK 527 (958)
Q Consensus 480 ~~~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 527 (958)
..++|.+....... ............+.. ++|+|||++|++.
T Consensus 283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~s 339 (357)
T 3i2n_A 283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS------LDWSPDKRGLCVC 339 (357)
T ss_dssp EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE------EEECSSSTTEEEE
T ss_pred cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeE------EEEcCCCCeEEEE
Confidence 26677665432110 011122222333333 7899999998853
No 219
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.59 E-value=1.2e-14 Score=153.34 Aligned_cols=198 Identities=10% Similarity=0.009 Sum_probs=129.6
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~a 746 (958)
.|+||++||.+... ..| ......|+++||.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 12 ~~~vvllHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~---~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (267)
T 3sty_A 12 KKHFVLVHAAFHGA-----------WCW----YKIVALMRSSGHNVTA---LDLGASGINPKQALQIPNFSDYLSPLMEF 73 (267)
T ss_dssp CCEEEEECCTTCCG-----------GGG----HHHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCc-----------chH----HHHHHHHHhcCCeEEE---eccccCCCCCCcCCccCCHHHHHHHHHHH
Confidence 68999999964221 111 2456678889999999 5666888776542 2345556666555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC--------------C---Ccc--cc-
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--------------F---GFQ--NE- 806 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~--------------~---~~~--~~- 806 (958)
++.+ + +.+++.|+|||+||.+++.++.++|++++++|++++........ + .+. ..
T Consensus 74 l~~l---~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (267)
T 3sty_A 74 MASL---P--ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGP 148 (267)
T ss_dssp HHTS---C--TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCT
T ss_pred HHhc---C--CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhh
Confidence 5443 1 34689999999999999999999999999999988754211100 0 000 00
Q ss_pred ---cchhhhc-------------HH------------------HHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHH
Q 002164 807 ---DRTLWEA-------------TS------------------TYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSD 852 (958)
Q Consensus 807 ---~~~~~~~-------------~~------------------~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~ 852 (958)
....+.. .. .+............++|+|+++|++|..+| ++...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~ 226 (267)
T 3sty_A 149 TNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALK--KEFLK 226 (267)
T ss_dssp TSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHH--HHHHH
T ss_pred hcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccC--HHHHH
Confidence 0000000 00 011112222222235899999999999988 88888
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 853 RFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 853 ~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
++.+.+.. ++++++|++||... .++...+.+.+.+|++++
T Consensus 227 ~~~~~~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 227 LMIEKNPP----DEVKEIEGSDHVTM-MSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHSCC----SEEEECTTCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHHhCCC----ceEEEeCCCCcccc-ccChHHHHHHHHHHHHhc
Confidence 88776643 58999999999864 466778888899998874
No 220
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.59 E-value=8.3e-13 Score=149.47 Aligned_cols=257 Identities=9% Similarity=0.035 Sum_probs=147.8
Q ss_pred CceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeee-ccCCCCCcc
Q 002164 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEI-QGFPDGAKL 191 (958)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~l-t~~~~~~~~ 191 (958)
...+||||++||....+ +.|.+|++.. +..... .. +...+
T Consensus 102 ~~~~~~~~~~l~~~~~d---------------------------------g~i~iwd~~~----~~~~~~~~~--h~~~v 142 (420)
T 3vl1_A 102 VDTAKLQMRRFILGTTE---------------------------------GDIKVLDSNF----NLQREIDQA--HVSEI 142 (420)
T ss_dssp EEEECSSSCEEEEEETT---------------------------------SCEEEECTTS----CEEEEETTS--SSSCE
T ss_pred EEEEecCCCEEEEEECC---------------------------------CCEEEEeCCC----cceeeeccc--ccCcc
Confidence 34689999999988765 4789999854 333333 23 33578
Q ss_pred cceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCC
Q 002164 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (958)
Q Consensus 192 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~ 271 (958)
..+.|+|||+.|+... ....|.+|++.+++........... +..++|+|||+.|+....+...
T Consensus 143 ~~~~~~~~~~~l~s~s---------~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~d~~v---- 205 (420)
T 3vl1_A 143 TKLKFFPSGEALISSS---------QDMQLKIWSVKDGSNPRTLIGHRAT----VTDIAIIDRGRNVLSASLDGTI---- 205 (420)
T ss_dssp EEEEECTTSSEEEEEE---------TTSEEEEEETTTCCCCEEEECCSSC----EEEEEEETTTTEEEEEETTSCE----
T ss_pred EEEEECCCCCEEEEEe---------CCCeEEEEeCCCCcCceEEcCCCCc----EEEEEEcCCCCEEEEEcCCCcE----
Confidence 9999999999888755 2568999999887654433322222 7789999999999876322111
Q ss_pred CCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc--CCeeeecC-CCccccccccCCCCcEEEE
Q 002164 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIG-PPAVYTSLDPSPDEKYILI 348 (958)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~~l~-~~~~~~~~~~SpDGk~l~~ 348 (958)
.+++...+...... ..... ....+..+.. ++...... ....+..++|||||+.|+.
T Consensus 206 --------~iwd~~~~~~~~~~------~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 206 --------RLWECGTGTTIHTF------NRKEN-------PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp --------EEEETTTTEEEEEE------CBTTB-------TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred --------EEeECCCCceeEEe------ecCCC-------CCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 11111110000000 00000 0011111111 11100011 1145678899999999988
Q ss_pred EeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc
Q 002164 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (958)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~ 427 (958)
...+ +.|.+||+.++.. ..+.. .....+..+.|+|||+.+++.
T Consensus 265 ~~~d-------------g~i~i~d~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~~l~~----------- 308 (420)
T 3vl1_A 265 GHVS-------------GVITVHNVFSKEQTIQLPS------------KFTCSCNSLTVDGNNANYIYA----------- 308 (420)
T ss_dssp EETT-------------SCEEEEETTTCCEEEEECC------------TTSSCEEEEEECSSCTTEEEE-----------
T ss_pred EcCC-------------CeEEEEECCCCceeEEccc------------ccCCCceeEEEeCCCCCEEEE-----------
Confidence 7633 4899999985543 33221 011345789999999954443
Q ss_pred ccccCCeEEEEeCCCCCCCC-ceEEEe-eccccCceeeecCCceEEEEEeccccceEEEEEcC
Q 002164 428 EVTPRDIIYTQQAEPVQGEG-PEILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~-~~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
.+..+.|++|++ ..+.. ...+.. ....+..+ ++++|+.|+..+.++. .++|.+..
T Consensus 309 -g~~dg~i~vwd~--~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~--v~iw~~~~ 365 (420)
T 3vl1_A 309 -GYENGMLAQWDL--RSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTS--IKLDIISD 365 (420)
T ss_dssp -EETTSEEEEEET--TCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEE--EEEEEECC
T ss_pred -EeCCCeEEEEEc--CCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCcc--EEEEeccC
Confidence 144568999996 23333 345544 33344444 5678887766543332 66776654
No 221
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.59 E-value=3.6e-13 Score=148.21 Aligned_cols=230 Identities=13% Similarity=0.130 Sum_probs=143.9
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCcee---eccCCCCccccccccceEEecCCeEEEEEecCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~---~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (958)
.+...+|||||+.||.... ...|.+|+++++... .+...... .+..++|+|||++|+....
T Consensus 18 ~v~~l~~sp~g~~las~~~---------D~~i~iw~~~~~~~~~~~~~~~~h~~----~v~~~~~sp~g~~l~s~s~--- 81 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGG---------DRRIRIWGTEGDSWICKSVLSEGHQR----TVRKVAWSPCGNYLASASF--- 81 (345)
T ss_dssp CEEEEEECTTSSCEEEEET---------TSCEEEEEEETTEEEEEEEECSSCSS----CEEEEEECTTSSEEEEEET---
T ss_pred cEEEEEECCCCCEEEEEcC---------CCeEEEEEcCCCcceeeeeeccccCC----cEEEEEECCCCCEEEEEEC---
Confidence 5788999999999998652 456777777776532 12222222 2778999999999997721
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe---eeecCCC-ccccccccCC
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDPSP 341 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~Sp 341 (958)
...+.++++ ++. ...+... ..+..++|+|
T Consensus 82 ----------------------------------------------D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp 115 (345)
T 3fm0_A 82 ----------------------------------------------DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP 115 (345)
T ss_dssp ----------------------------------------------TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT
T ss_pred ----------------------------------------------CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC
Confidence 122444444 332 3344444 6788999999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEec
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~ 420 (958)
||++|+..+.+ +.+.+||++.+. .+.+.... .....+..+.|+|||+.|+..
T Consensus 116 ~~~~l~s~s~D-------------~~v~iwd~~~~~~~~~~~~~~----------~h~~~v~~~~~~p~~~~l~s~---- 168 (345)
T 3fm0_A 116 SGNLLATCSRD-------------KSVWVWEVDEEDEYECVSVLN----------SHTQDVKHVVWHPSQELLASA---- 168 (345)
T ss_dssp TSSEEEEEETT-------------SCEEEEEECTTSCEEEEEEEC----------CCCSCEEEEEECSSSSCEEEE----
T ss_pred CCCEEEEEECC-------------CeEEEEECCCCCCeEEEEEec----------CcCCCeEEEEECCCCCEEEEE----
Confidence 99999988743 489999997542 22222111 111345789999999987763
Q ss_pred cCCCcccccccCCeEEEEeCCCCCCCCc---eEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCc--
Q 002164 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAP-- 495 (958)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~-- 495 (958)
+..+.|.+|+. ..+.. ..+..+...+..++|+|||+.|+..+.++. .+||.....+.....
T Consensus 169 ---------s~d~~i~~w~~---~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~--v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 169 ---------SYDDTVKLYRE---EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT--VRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp ---------ETTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEEEEECTTCTTCCCC
T ss_pred ---------eCCCcEEEEEe---cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe--EEEeccccCCCCcccee
Confidence 34556777874 33322 233445566788999999999988765544 788876443321100
Q ss_pred -------EEE--e-ccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 496 -------RIL--F-DRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 496 -------~~~--~-~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
..+ . ......++. ++|+|++..|+...
T Consensus 235 ~~~~~~~~~~~~~~~~h~~~v~~------v~~~~~~~~l~s~~ 271 (345)
T 3fm0_A 235 SGSDPSWKCICTLSGFHSRTIYD------IAWCQLTGALATAC 271 (345)
T ss_dssp C---CEEEEEEEECSSCSSCEEE------EEECTTTCCEEEEE
T ss_pred eccCCccceeEEecCCCCCcEEE------EEEecCCCEEEEEe
Confidence 001 1 112222333 78999999888775
No 222
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.59 E-value=3e-14 Score=154.46 Aligned_cols=208 Identities=14% Similarity=0.097 Sum_probs=135.5
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|..++...+-| .|+||++||++... ..| ...+..|++ ||.|++ .+.+|+
T Consensus 55 ~~~~~~~~~~~g~----------~p~vv~lhG~~~~~-----------~~~----~~~~~~L~~-~~~v~~---~D~~G~ 105 (314)
T 3kxp_A 55 IGRITLNVREKGS----------GPLMLFFHGITSNS-----------AVF----EPLMIRLSD-RFTTIA---VDQRGH 105 (314)
T ss_dssp CSSCEEEEEEECC----------SSEEEEECCTTCCG-----------GGG----HHHHHTTTT-TSEEEE---ECCTTS
T ss_pred ECCEEEEEEecCC----------CCEEEEECCCCCCH-----------HHH----HHHHHHHHc-CCeEEE---EeCCCc
Confidence 3777777665422 57899999964211 111 123444544 799999 555677
Q ss_pred CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC-----
Q 002164 727 GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT----- 799 (958)
Q Consensus 727 G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~----- 799 (958)
|.+... ........+|+.++++++ +.++++++|||+||.+++.++.++|++++++|++++.......
T Consensus 106 G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (314)
T 3kxp_A 106 GLSDKPETGYEANDYADDIAGLIRTL------ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDAL 179 (314)
T ss_dssp TTSCCCSSCCSHHHHHHHHHHHHHHH------TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHH
Confidence 776422 223456677777776665 2358999999999999999999999999999999875432110
Q ss_pred -------CCCccccc--chhh---------hcHHHHH---------------------------hcCcccccCCCCCCEE
Q 002164 800 -------PFGFQNED--RTLW---------EATSTYV---------------------------EMSPFMSANKLKKPIL 834 (958)
Q Consensus 800 -------~~~~~~~~--~~~~---------~~~~~~~---------------------------~~sp~~~~~~~~~P~L 834 (958)
...+.... ...+ .....+. ..+....+.++++|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 259 (314)
T 3kxp_A 180 EARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVL 259 (314)
T ss_dssp HHHTTTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEE
T ss_pred HHHhhhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEE
Confidence 00000000 0000 0000000 0033344567899999
Q ss_pred EEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 835 LVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 835 ii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
+++|++|..+| ++.+.++++.++. ++++++|++||.+. .++...+.+.+.+||++
T Consensus 260 ii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~~~g~gH~~~-~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 260 IVRGESSKLVS--AAALAKTSRLRPD----LPVVVVPGADHYVN-EVSPEITLKAITNFIDA 314 (314)
T ss_dssp EEEETTCSSSC--HHHHHHHHHHCTT----SCEEEETTCCSCHH-HHCHHHHHHHHHHHHHC
T ss_pred EEecCCCccCC--HHHHHHHHHhCCC----ceEEEcCCCCCcch-hhCHHHHHHHHHHHHhC
Confidence 99999999998 8888888887743 58889999999873 45567788888888863
No 223
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.59 E-value=2.7e-13 Score=148.56 Aligned_cols=257 Identities=13% Similarity=0.113 Sum_probs=155.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++|++.... . ..|.+|++..++ +..+.+..++...
T Consensus 39 ~~~~~~~spdg~~l~~~~~~----------------------~----------~~v~~~~~~~~~--~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRP----------------------E----------FRVLAYRIAPDD--GALTFAAESALPG 84 (343)
T ss_dssp CCCCEEECTTSSEEEEEETT----------------------T----------TEEEEEEECTTT--CCEEEEEEEECSS
T ss_pred CCceEEECCCCCEEEEeecC----------------------C----------CeEEEEEecCCC--CceeeccccccCC
Confidence 46679999999999887763 1 267888885212 3333333222223
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCC---ceeeccCCCCccccccccceEEecCCeEEEEEecCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG---KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g---~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (958)
.+..++|||||++|+++.. ....|+++++..| +.......... +..++|+|||+.|+++..
T Consensus 85 ~~~~~~~s~dg~~l~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~--- 148 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSY--------NAGNVSVTRLEDGLPVGVVDVVEGLDG-----CHSANISPDNRTLWVPAL--- 148 (343)
T ss_dssp CCSEEEECTTSSEEEEEET--------TTTEEEEEEEETTEEEEEEEEECCCTT-----BCCCEECTTSSEEEEEEG---
T ss_pred CCcEEEEcCCCCEEEEEec--------CCCeEEEEECCCCccccccccccCCCC-----ceEEEECCCCCEEEEecC---
Confidence 6788999999999888652 2346777777332 23333222221 568999999998887610
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C-Ceeee-----cCC--Ccccccc
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-GTVKE-----IGP--PAVYTSL 337 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~-g~~~~-----l~~--~~~~~~~ 337 (958)
....|+++++ + |+... +.. +.....+
T Consensus 149 ---------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 149 ---------------------------------------------KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp ---------------------------------------------GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEE
T ss_pred ---------------------------------------------CCCEEEEEEecCCCceeeecccccccCCCCCcceE
Confidence 2245778887 5 65432 211 2355678
Q ss_pred ccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC--ceEEEeccCCccccCcccccccccCcceeeeecCCCCceE
Q 002164 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG--IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 338 ~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~--~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
+|+|||++|+++... .+.+.+|+++. +..+.+..... .+..+.. ...+..+.|+|||+.|++
T Consensus 184 ~~~pdg~~l~~~~~~------------~~~i~~~~~~~~~g~~~~~~~~~~---~~~~~~~-~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 184 VFHPNEQYAYCVNEL------------NSSVDVWELKDPHGNIECVQTLDM---MPENFSD-TRWAADIHITPDGRHLYA 247 (343)
T ss_dssp EECTTSSEEEEEETT------------TTEEEEEESSCTTSCCEEEEEEEC---SCTTCCS-CCCEEEEEECTTSSEEEE
T ss_pred EECCCCCEEEEEeCC------------CCEEEEEEecCCCCcEEEEeeccc---cCccccc-cCCccceEECCCCCEEEE
Confidence 999999999887632 34899999853 33322211110 0000000 012346899999998876
Q ss_pred EEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE--eeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
.. ...+.+.+|+++ .+++..+.+. ........++|+|||++|++....++ ...+|.++..++
T Consensus 248 ~~------------~~~~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~v~v~~~d~~~g 311 (343)
T 1ri6_A 248 CD------------RTASLITVFSVS-EDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH-HISVYEIVGEQG 311 (343)
T ss_dssp EE------------TTTTEEEEEEEC-TTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTC-EEEEEEEETTTT
T ss_pred Ee------------cCCCEEEEEEEc-CCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCC-eEEEEEEcCCCc
Confidence 31 234578888862 1244444442 22334678999999999888764433 367888887764
No 224
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.58 E-value=3.8e-14 Score=149.74 Aligned_cols=211 Identities=18% Similarity=0.134 Sum_probs=138.3
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++...+-|.+ .+.|.||++||.+.... .| ...+..|+ .+|.|++ .|.+|+
T Consensus 9 ~~g~~l~y~~~g~~~------~~~~~vvllHG~~~~~~-----------~~----~~~~~~L~-~~~~vi~---~D~~G~ 63 (266)
T 2xua_A 9 VNGTELHYRIDGERH------GNAPWIVLSNSLGTDLS-----------MW----APQVAALS-KHFRVLR---YDTRGH 63 (266)
T ss_dssp CSSSEEEEEEESCSS------SCCCEEEEECCTTCCGG-----------GG----GGGHHHHH-TTSEEEE---ECCTTS
T ss_pred ECCEEEEEEEcCCcc------CCCCeEEEecCccCCHH-----------HH----HHHHHHHh-cCeEEEE---ecCCCC
Confidence 488889887764421 01478999999542211 11 12344554 4699999 666788
Q ss_pred CCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC-CC-
Q 002164 727 GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP-FG- 802 (958)
Q Consensus 727 G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~-~~- 802 (958)
|.+.... .......+|+.+.++.+ ..+++.++||||||.+++.+|.++|++++++|++++........ +.
T Consensus 64 G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 137 (266)
T 2xua_A 64 GHSEAPKGPYTIEQLTGDVLGLMDTL------KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVP 137 (266)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHH
Confidence 8875432 23556677777777664 23589999999999999999999999999999998754321100 00
Q ss_pred ---------ccc---c-----cchhh--hcH---------------HH-------HHhcCcccccCCCCCCEEEEeeCCC
Q 002164 803 ---------FQN---E-----DRTLW--EAT---------------ST-------YVEMSPFMSANKLKKPILLVHGEED 841 (958)
Q Consensus 803 ---------~~~---~-----~~~~~--~~~---------------~~-------~~~~sp~~~~~~~~~P~Lii~G~~D 841 (958)
... . ....+ ..+ .. +...+....+.++++|+|+++|++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 217 (266)
T 2xua_A 138 RAVKARTEGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHD 217 (266)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTC
T ss_pred HHHHHHhcChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCC
Confidence 000 0 00000 000 00 1122333456778999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 842 NNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 842 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
..+| ++.++++.+.+.. .++++++ +||... .++...+.+.+.+||.+
T Consensus 218 ~~~~--~~~~~~~~~~~~~----~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 218 LAAT--PAQGRELAQAIAG----ARYVELD-ASHISN-IERADAFTKTVVDFLTE 264 (266)
T ss_dssp SSSC--HHHHHHHHHHSTT----CEEEEES-CCSSHH-HHTHHHHHHHHHHHHTC
T ss_pred CcCC--HHHHHHHHHhCCC----CEEEEec-CCCCch-hcCHHHHHHHHHHHHHh
Confidence 9998 8888888777654 4889999 999874 45567788888888753
No 225
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.58 E-value=2.6e-14 Score=160.39 Aligned_cols=151 Identities=19% Similarity=0.263 Sum_probs=91.8
Q ss_pred CcEEEEEEEeCC--C--eEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCC
Q 002164 637 LQKELIKYQRKD--G--VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG 712 (958)
Q Consensus 637 ~~~~~~~~~~~d--g--~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G 712 (958)
+....+.|.+.+ | ..+.++++.|.+..+ .++.|+||++||+.............. .......+..|+++|
T Consensus 44 v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~--~~~~P~vv~~HG~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~G 117 (397)
T 3h2g_A 44 VRVAEFTYATIGVEGEPATASGVLLIPGGERC--SGPYPLLGWGHPTEALRAQEQAKEIRD----AKGDDPLVTRLASQG 117 (397)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECTTC--CSCEEEEEEECCCCCBTTCCHHHHHHH----TTTCSHHHHTTGGGT
T ss_pred eEEEEEEEEecCCCCCeEEEEEEEEeCCCCCC--CCCCcEEEEeCCCcCCCCccccccccc----ccchHHHHHHHHHCC
Confidence 445667776654 4 469999999987532 345999999999753221100000000 011224566788999
Q ss_pred cEEEEcCCCCCCCCCCcccc---hhhH---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHh-CC---
Q 002164 713 FAILGGPTTPIIGEGDEEAN---DRFV---EQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAH-AP--- 781 (958)
Q Consensus 713 ~~vl~~~~~~~~G~G~~~~~---~~~~---~~~~~D~~~av~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~-~p--- 781 (958)
|.|+++|+ +|+|.+... .... ...+.|...++..+.++ +..|+++|+|+||||||.+++.++.. .+
T Consensus 118 ~~V~~~D~---~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~ 194 (397)
T 3h2g_A 118 YVVVGSDY---LGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLS 194 (397)
T ss_dssp CEEEEECC---TTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCT
T ss_pred CEEEEecC---CCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcC
Confidence 99999555 566654211 1111 13344555555555543 55567899999999999999888732 21
Q ss_pred --CceeEEEEeccCCCC
Q 002164 782 --HLFCCGIARSGAYNR 796 (958)
Q Consensus 782 --~~~~a~v~~~~~~~~ 796 (958)
-.+.+++..+++++.
T Consensus 195 ~~~~~~~~~~~~~~~~l 211 (397)
T 3h2g_A 195 KEFHLVASAPISGPYAL 211 (397)
T ss_dssp TTSEEEEEEEESCCSSH
T ss_pred cCcceEEEecccccccH
Confidence 157888887776653
No 226
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.58 E-value=3.3e-14 Score=155.37 Aligned_cols=215 Identities=14% Similarity=0.140 Sum_probs=136.2
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGE 726 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~~G~ 726 (958)
+|.+++...+-|++- ..+.+.||++||++..... |. .....|++ .||.|++ .|.+|+
T Consensus 36 ~g~~l~y~~~G~~~~----~~~g~plvllHG~~~~~~~-----------w~----~~~~~l~~~~~~~Via---~D~rG~ 93 (330)
T 3nwo_A 36 GDHETWVQVTTPENA----QPHALPLIVLHGGPGMAHN-----------YV----ANIAALADETGRTVIH---YDQVGC 93 (330)
T ss_dssp TTEEEEEEEECCSSC----CTTCCCEEEECCTTTCCSG-----------GG----GGGGGHHHHHTCCEEE---ECCTTS
T ss_pred cCcEEEEEEecCccC----CCCCCcEEEECCCCCCchh-----------HH----HHHHHhccccCcEEEE---ECCCCC
Confidence 789998888866321 1011247778997532211 11 11234555 6999999 666788
Q ss_pred CCccc--ch--h--hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC--
Q 002164 727 GDEEA--ND--R--FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL-- 798 (958)
Q Consensus 727 G~~~~--~~--~--~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~-- 798 (958)
|.+.. .. . ......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|+.++......
T Consensus 94 G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~ 167 (330)
T 3nwo_A 94 GNSTHLPDAPADFWTPQLFVDEFHAVCTAL------GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWS 167 (330)
T ss_dssp TTSCCCTTSCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHH
T ss_pred CCCCCCCCCccccccHHHHHHHHHHHHHHc------CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHH
Confidence 88753 11 1 2355677777776664 225899999999999999999999999999998876432100
Q ss_pred ----------CC-----------CC-cccc---------------cchhhh------------cHHHHH-----------
Q 002164 799 ----------TP-----------FG-FQNE---------------DRTLWE------------ATSTYV----------- 818 (958)
Q Consensus 799 ----------~~-----------~~-~~~~---------------~~~~~~------------~~~~~~----------- 818 (958)
.. .. +... ....+. .+..+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (330)
T 3nwo_A 168 EAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVV 247 (330)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCC
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhh
Confidence 00 00 0000 000000 000010
Q ss_pred ----hcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 819 ----EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 819 ----~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
..+....+.++++|+||++|++|..+| ....++.+.+. ..+++++|++||... .+....+.+.+.+||
T Consensus 248 ~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p---~~~~~~~~~ip----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~FL 319 (330)
T 3nwo_A 248 GTLGDWSVIDRLPDVTAPVLVIAGEHDEATP---KTWQPFVDHIP----DVRSHVFPGTSHCTH-LEKPEEFRAVVAQFL 319 (330)
T ss_dssp SGGGGCBCGGGGGGCCSCEEEEEETTCSSCH---HHHHHHHHHCS----SEEEEEETTCCTTHH-HHSHHHHHHHHHHHH
T ss_pred ccccCCchhhhcccCCCCeEEEeeCCCccCh---HHHHHHHHhCC----CCcEEEeCCCCCchh-hcCHHHHHHHHHHHH
Confidence 112223456789999999999998764 45666655543 479999999999874 566788899999999
Q ss_pred HHhh
Q 002164 895 QKYC 898 (958)
Q Consensus 895 ~~~l 898 (958)
.++.
T Consensus 320 ~~~~ 323 (330)
T 3nwo_A 320 HQHD 323 (330)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 8864
No 227
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.58 E-value=1.1e-14 Score=153.94 Aligned_cols=211 Identities=12% Similarity=0.142 Sum_probs=136.7
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGE 726 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~~G~ 726 (958)
+|..++.... + ..|.||++||.+.... .| ......|++ +||.|++ .+.+|+
T Consensus 9 ~g~~l~y~~~---g-------~~~~vv~lhG~~~~~~-----------~~----~~~~~~l~~~~g~~v~~---~d~~G~ 60 (272)
T 3fsg_A 9 TRSNISYFSI---G-------SGTPIIFLHGLSLDKQ-----------ST----CLFFEPLSNVGQYQRIY---LDLPGM 60 (272)
T ss_dssp CTTCCEEEEE---C-------CSSEEEEECCTTCCHH-----------HH----HHHHTTSTTSTTSEEEE---ECCTTS
T ss_pred cCCeEEEEEc---C-------CCCeEEEEeCCCCcHH-----------HH----HHHHHHHhccCceEEEE---ecCCCC
Confidence 6777765443 1 1467899999642110 01 112223455 6999999 566678
Q ss_pred CCcccch-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCC----
Q 002164 727 GDEEAND-RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPF---- 801 (958)
Q Consensus 727 G~~~~~~-~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~---- 801 (958)
|.+.... .......+|+.++++.+. +.+++.++|||+||.+++.++.++|++++++|+++|.........
T Consensus 61 G~s~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 135 (272)
T 3fsg_A 61 GNSDPISPSTSDNVLETLIEAIEEII-----GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGK 135 (272)
T ss_dssp TTCCCCSSCSHHHHHHHHHHHHHHHH-----TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHh-----CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCcccccccc
Confidence 8775543 345666777777776642 236899999999999999999999999999999998753211000
Q ss_pred -------Cccc----cc------------chhhhcH-------------HHHHh--------cCcccccCCCCCCEEEEe
Q 002164 802 -------GFQN----ED------------RTLWEAT-------------STYVE--------MSPFMSANKLKKPILLVH 837 (958)
Q Consensus 802 -------~~~~----~~------------~~~~~~~-------------~~~~~--------~sp~~~~~~~~~P~Lii~ 837 (958)
.+.. .. ...+... ..+.. ..+...+.++++|+|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 215 (272)
T 3fsg_A 136 HINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMV 215 (272)
T ss_dssp CCCEECSCCCCCTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEE
T ss_pred chhhhhhhhhcccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEE
Confidence 0000 00 0000000 00000 001113477899999999
Q ss_pred eCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
|++|..+| +....++.+.++ .+++++++++||.+. .+....+.+.+.+||.+..
T Consensus 216 g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 216 GRNDQVVG--YQEQLKLINHNE----NGEIVLLNRTGHNLM-IDQREAVGFHFDLFLDELN 269 (272)
T ss_dssp ETTCTTTC--SHHHHHHHTTCT----TEEEEEESSCCSSHH-HHTHHHHHHHHHHHHHHHH
T ss_pred eCCCCcCC--HHHHHHHHHhcC----CCeEEEecCCCCCch-hcCHHHHHHHHHHHHHHhh
Confidence 99999998 888877776553 479999999999874 4566788889999998764
No 228
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.58 E-value=1.4e-13 Score=152.06 Aligned_cols=271 Identities=10% Similarity=0.060 Sum_probs=179.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcc---------cccceeeceeecCCCCCccceeeEeceeEEEccCCCCC---C
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELA---------RPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL---G 177 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~---~ 177 (958)
.+..++|||||++||..+.+....+++.. .+...+..+.+++++......+.++.+.+|++..+... .
T Consensus 66 ~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~ 145 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAA 145 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGG
T ss_pred eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccc
Confidence 46688999999999988877444444322 22333455677777766655555677889988543211 1
Q ss_pred ceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEec--CC
Q 002164 178 QEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN--NS 255 (958)
Q Consensus 178 ~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp--DG 255 (958)
....+..+ ...+....|+||++.|+... ....|.+||+++++........... +..+.|+| +|
T Consensus 146 ~~~~~~~h--~~~v~~~~~~~~~~~l~t~s---------~D~~v~lwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~g 210 (354)
T 2pbi_B 146 KKKSVAMH--TNYLSACSFTNSDMQILTAS---------GDGTCALWDVESGQLLQSFHGHGAD----VLCLDLAPSETG 210 (354)
T ss_dssp GCEEEEEC--SSCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTCCEEEEEECCSSC----EEEEEECCCSSC
T ss_pred cceeeecc--CCcEEEEEEeCCCCEEEEEe---------CCCcEEEEeCCCCeEEEEEcCCCCC----eEEEEEEeCCCC
Confidence 22334332 34688899999999998765 3568899999988765544333322 55677876 57
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-c
Q 002164 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-A 332 (958)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~ 332 (958)
+.|+... ....|.++|+ +++.. .+... .
T Consensus 211 ~~l~sgs-------------------------------------------------~Dg~v~~wd~~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 211 NTFVSGG-------------------------------------------------CDKKAMVWDMRSGQCVQAFETHES 241 (354)
T ss_dssp CEEEEEE-------------------------------------------------TTSCEEEEETTTCCEEEEECCCSS
T ss_pred CEEEEEe-------------------------------------------------CCCeEEEEECCCCcEEEEecCCCC
Confidence 7887661 2245778888 77543 34333 6
Q ss_pred cccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCC
Q 002164 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (958)
Q Consensus 333 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~ 412 (958)
.+..++|+|||+.|+..+.+ +.+.+||+.......+..... ...+...+.|+|||+.
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D-------------~~v~lwd~~~~~~~~~~~~~~----------~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDD-------------ATCRLYDLRADREVAIYSKES----------IIFGASSVDFSLSGRL 298 (354)
T ss_dssp CEEEEEECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCTT----------CCSCEEEEEECTTSSE
T ss_pred CeEEEEEeCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCCC----------cccceeEEEEeCCCCE
Confidence 78899999999999887743 489999998654333222110 0124467899999998
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEE
Q 002164 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTW 484 (958)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~ 484 (958)
++.. +..+.|.+|++ ..+.....+..+...+..++|||||+.|+..+.++. .+||
T Consensus 299 l~~g-------------~~d~~i~vwd~--~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~--v~vW 353 (354)
T 2pbi_B 299 LFAG-------------YNDYTINVWDV--LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHT--LRVW 353 (354)
T ss_dssp EEEE-------------ETTSCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSE--EEEE
T ss_pred EEEE-------------ECCCcEEEEEC--CCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCC--EEec
Confidence 7763 34567999996 344444555566777888999999999988765543 4455
No 229
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.58 E-value=8.5e-13 Score=153.94 Aligned_cols=310 Identities=14% Similarity=0.090 Sum_probs=183.6
Q ss_pred CCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEc--cCCCCCCceeeeccCCCC
Q 002164 111 LPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQL--FPDGKLGQEIEIQGFPDG 188 (958)
Q Consensus 111 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~--~~dg~~~~~~~lt~~~~~ 188 (958)
+..++|||||++|+....+ ..|.+|++ .+ + .....+. .+
T Consensus 181 ~~~v~~spdg~~l~v~~~d---------------------------------~~V~v~D~~~~t-~--~~~~~i~---~g 221 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD---------------------------------ARIDMIDLWAKE-P--TKVAEIK---IG 221 (543)
T ss_dssp EEEEEECTTSCEEEEEETT---------------------------------SEEEEEETTSSS-C--EEEEEEE---CC
T ss_pred cceEEECCCCCEEEEECCC---------------------------------CeEEEEECcCCC-C--cEEEEEe---cC
Confidence 3457789999988777653 37889998 33 1 2223332 34
Q ss_pred CcccceeecC----CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcc-------ccccccceEEecCCeE
Q 002164 189 AKLNFVTWSQ----DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY-------LNAIFDNFVWVNNSTL 257 (958)
Q Consensus 189 ~~~~~~~wSP----DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~-------~~~~~~~~~wspDG~~ 257 (958)
......+||| ||++|+.... ....|.++|..+++..+........ -...+..+.+|||++.
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~--------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAY--------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEE--------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred CCcceEEeCCCcCCCCCEEEEEEc--------cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 5678899999 9999877542 1457889999888776543321100 0001457889998877
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee---eecCCCcc
Q 002164 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV---KEIGPPAV 333 (958)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~---~~l~~~~~ 333 (958)
+++... ...+|++++. +++. ..+.....
T Consensus 294 ~~vs~~------------------------------------------------~~g~i~vvd~~~~~~l~~~~i~~~~~ 325 (543)
T 1nir_A 294 FIVNVK------------------------------------------------ETGKVLLVNYKDIDNLTVTSIGAAPF 325 (543)
T ss_dssp EEEEET------------------------------------------------TTTEEEEEECTTSSSCEEEEEECCSS
T ss_pred EEEEEC------------------------------------------------CCCeEEEEEecCCCcceeEEeccCcC
Confidence 776510 2356889988 5432 23322345
Q ss_pred ccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceee-eecCCCC
Q 002164 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN-WRSDKPS 412 (958)
Q Consensus 334 ~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~-~spDG~~ 412 (958)
...+.|||||++++..... .++|.+||+++++........ ..|. .+ +.+. ++||+..
T Consensus 326 ~~~~~~spdg~~l~va~~~------------~~~v~v~D~~tg~l~~~i~~g---~~ph------~g-~g~~~~~p~~g~ 383 (543)
T 1nir_A 326 LHDGGWDSSHRYFMTAANN------------SNKVAVIDSKDRRLSALVDVG---KTPH------PG-RGANFVHPKYGP 383 (543)
T ss_dssp CCCEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEECS---SSBC------CT-TCEEEEETTTEE
T ss_pred ccCceECCCCCEEEEEecC------------CCeEEEEECCCCeEEEeeccC---CCCC------CC-CCcccCCCCCcc
Confidence 6778999999999877643 248999999977654332211 0110 01 2333 4688666
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEeCCCCC-----CCCceEEEeeccccCceeeecCCceEEEEEeccc---cceEEE
Q 002164 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-----GEGPEILHKLDLRYGGISWCDDSLALVYESWYKT---RRTRTW 484 (958)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~---~~~~l~ 484 (958)
+++. .. ...+.|.+|+.++.. .+..+.+.........+.++|||++|+.....+. ....|.
T Consensus 384 ~~~s-~~----------~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 384 VWST-SH----------LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp EEEE-EB----------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEE
T ss_pred EEEe-cc----------CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEE
Confidence 5543 11 124578888863211 2223444433344567899999999987652111 013577
Q ss_pred EEcCCCCCCCcEEEe--c-----cCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEE
Q 002164 485 VISPGSKDVAPRILF--D-----RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (958)
Q Consensus 485 ~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 557 (958)
++|.++.+.....+. + .....+. ++.|+|||++|++..-.. ......|.+|
T Consensus 453 v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~~g~~~~~s~~~~----------------~~~~~~i~v~ 510 (543)
T 1nir_A 453 VFDLKNLDAKYQVLPIAEWADLGEGAKRVV------QPEYNKRGDEVWFSVWNG----------------KNDSSALVVV 510 (543)
T ss_dssp EEETTCTTSCCEEECHHHHHCCCSSCCEEE------EEEECSSSSEEEEEEECC----------------TTSCCEEEEE
T ss_pred EEECCCCCCCeEEeechhhcccCCCCCceE------eccCCCCCCEEEEEeecC----------------CCCCCeEEEE
Confidence 788777543212221 0 1111111 278999999999875211 0112369999
Q ss_pred ECCCCceEEEecC
Q 002164 558 DINTGSKERIWES 570 (958)
Q Consensus 558 dl~~g~~~~l~~~ 570 (958)
|.++++.......
T Consensus 511 D~~t~~~~~~i~~ 523 (543)
T 1nir_A 511 DDKTLKLKAVVKD 523 (543)
T ss_dssp ETTTTEEEEEECC
T ss_pred ECCCceEEEeecC
Confidence 9999988766553
No 230
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.58 E-value=2.3e-13 Score=152.04 Aligned_cols=278 Identities=10% Similarity=0.072 Sum_probs=171.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..+.|||||++|+..+.+ +.|.+|++.+ + .....+.. +..
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D---------------------------------~~v~iWd~~~-~--~~~~~~~~--h~~ 109 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQD---------------------------------GRLIVWNALT-S--QKTHAIKL--HCP 109 (380)
T ss_dssp CEEEEEECTTSSCEEEEETT---------------------------------SEEEEEETTT-T--EEEEEEEC--CCT
T ss_pred EEEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEECCC-C--ccceEEec--CCC
Confidence 56788999999999988876 5799999854 2 23344443 234
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCce--------eeccCCCCccccccccceEEecCCe-EEEE
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--------RPLFQSPDIYLNAIFDNFVWVNNST-LLVC 260 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~lt~~~~~~~~~~~~~~~wspDG~-~l~~ 260 (958)
.+...+|+|||+.|+... ....+.+|++.+... +.+..+.. .+..+.|+|++. .|+.
T Consensus 110 ~v~~~~~s~~g~~las~~---------~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~-----~v~~~~~~~~~~~~l~s 175 (380)
T 3iz6_a 110 WVMECAFAPNGQSVACGG---------LDSACSIFNLSSQADRDGNMPVSRVLTGHKG-----YASSCQYVPDQETRLIT 175 (380)
T ss_dssp TCCCCEECTTSSEEEECC---------SSSCCEEEECCCCSSCCCSSTTCCBCCCCSS-----CCCCCBCCSSSSSCEEE
T ss_pred CEEEEEECCCCCEEEEee---------CCCcEEEEECCCCccccCCccceeeccCCCc-----ceEEEEEecCCCCEEEE
Confidence 688899999999998743 355667777654321 11221111 266788998754 4554
Q ss_pred EecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecC------CC-c
Q 002164 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG------PP-A 332 (958)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~------~~-~ 332 (958)
.. ....|.++|+ +|+..... .. .
T Consensus 176 ~s-------------------------------------------------~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 176 GS-------------------------------------------------GDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp EC-------------------------------------------------TTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred EC-------------------------------------------------CCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 41 2234667777 66433221 12 4
Q ss_pred cccccccCC-CCcEEEEEeecCCccccccCCCCCceeEEEecc-Cc-eEEEeccCCccccCcccccccccCcceeeeecC
Q 002164 333 VYTSLDPSP-DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GI-FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (958)
Q Consensus 333 ~~~~~~~Sp-DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~-~~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spD 409 (958)
.+..+.|+| |++.|+..+. ++.|.+||+. ++ ..+.+.. ....+..+.|+||
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~-------------D~~v~~wd~~~~~~~~~~~~~-------------h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSC-------------DTTVRLWDLRITSRAVRTYHG-------------HEGDINSVKFFPD 260 (380)
T ss_dssp CEEEEEECSSSCCEEEEEET-------------TSCEEEEETTTTCCCCEEECC-------------CSSCCCEEEECTT
T ss_pred CeEEEEeecCCCCEEEEEEC-------------CCeEEEEECCCCCcceEEECC-------------cCCCeEEEEEecC
Confidence 567778876 7887777663 3489999987 32 2233322 2245678999999
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCc-eEEEeec-------cccCceeeecCCceEEEEEeccccce
Q 002164 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLD-------LRYGGISWCDDSLALVYESWYKTRRT 481 (958)
Q Consensus 410 G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~-------~~~~~~~~spDg~~l~~~~~~~~~~~ 481 (958)
|+.++.. +..+.|.+||+ ..+.. ..+.... ..+..++|+|+|+.|+.....+
T Consensus 261 ~~~l~s~-------------s~D~~i~lwd~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg---- 320 (380)
T 3iz6_a 261 GQRFGTG-------------SDDGTCRLFDM---RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG---- 320 (380)
T ss_dssp SSEEEEE-------------CSSSCEEEEET---TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS----
T ss_pred CCeEEEE-------------cCCCeEEEEEC---CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC----
Confidence 9987663 45667899996 33332 2222111 1256789999999988765433
Q ss_pred EEEEEcCCCCCCCcEEEe----ccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEE
Q 002164 482 RTWVISPGSKDVAPRILF----DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLF 557 (958)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 557 (958)
.|+++|+..+ +..... ......+.. ++|||||++|+....+ ..|.+|
T Consensus 321 ~i~vwd~~~~--~~~~~~~~~~~~h~~~v~~------l~~s~dg~~l~sgs~D---------------------~~i~iW 371 (380)
T 3iz6_a 321 DCYVWDTLLA--EMVLNLGTLQNSHEGRISC------LGLSSDGSALCTGSWD---------------------KNLKIW 371 (380)
T ss_dssp CEEEEETTTC--CEEEEECCSCSSCCCCCCE------EEECSSSSEEEEECTT---------------------SCEEEE
T ss_pred CEEEEECCCC--ceEEEEecccCCCCCceEE------EEECCCCCEEEEeeCC---------------------CCEEEE
Confidence 3555565553 222211 122222332 7899999998877621 258899
Q ss_pred ECCCCc
Q 002164 558 DINTGS 563 (958)
Q Consensus 558 dl~~g~ 563 (958)
++.+++
T Consensus 372 ~~~~~~ 377 (380)
T 3iz6_a 372 AFSGHR 377 (380)
T ss_dssp ECCSSS
T ss_pred ecCCCc
Confidence 987653
No 231
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.58 E-value=2.7e-13 Score=154.93 Aligned_cols=252 Identities=9% Similarity=0.070 Sum_probs=149.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCC-----CC---ceee
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGK-----LG---QEIE 181 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~-----~~---~~~~ 181 (958)
.+..++|||||++||....+ +.|.||++..... .. ....
T Consensus 30 ~V~~v~~s~~g~~la~g~~d---------------------------------g~v~iw~~~~~~~~~~~~~~~~~~~~~ 76 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKG---------------------------------GRVVIFQQEQENKIQSHSRGEYNVYST 76 (447)
T ss_dssp SEEEEEECSSSSEEEEEETT---------------------------------SEEEEEEECC-----CCCCCCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCC---------------------------------CeEEEEEecCCCCCCcccccceeEecc
Confidence 57789999999999998875 4788999854110 00 1334
Q ss_pred eccCCCC----------CcccceeecCCC--CeEEEEEeeccccCCCCCceEEEEEcCCCcee-----------------
Q 002164 182 IQGFPDG----------AKLNFVTWSQDG--KHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR----------------- 232 (958)
Q Consensus 182 lt~~~~~----------~~~~~~~wSPDG--~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~----------------- 232 (958)
+.++... ..+....|+|++ ..|+.... ...|.+|++.+++..
T Consensus 77 ~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~---------d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~ 147 (447)
T 3dw8_B 77 FQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTN---------DKTIKLWKISERDKRPEGYNLKEEDGRYRDPT 147 (447)
T ss_dssp EECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEEC---------SSCEEEEEEEEEEEEEECCSCC--------CC
T ss_pred cccccccccccccccccCceEEEEEcCCCCcceEEEeCC---------CCeEEEEecccccCCcceecccCccccccCcc
Confidence 4432200 458899999998 67776542 445666666553321
Q ss_pred -----------------------eccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcc
Q 002164 233 -----------------------PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDI 289 (958)
Q Consensus 233 -----------------------~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (958)
.+..... ..+..++|+|||+.|+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~---------------------------- 195 (447)
T 3dw8_B 148 TVTTLRVPVFRPMDLMVEASPRRIFANAHT----YHINSISINSDYETYLSA---------------------------- 195 (447)
T ss_dssp CCCSCCCCEEEEEEEEEEEEEEEEECSCCS----SCCCEEEECTTSSEEEEE----------------------------
T ss_pred cccceEeccccchheeeeccceEEeccCCC----cceEEEEEcCCCCEEEEe----------------------------
Confidence 1111111 126789999999988865
Q ss_pred cccchhhhhccCchhhhHHHHhhcceEEEEEc-CC-eeee--------cCCC-ccccccccCCCC-cEEEEEeecCCccc
Q 002164 290 IQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVKE--------IGPP-AVYTSLDPSPDE-KYILISSIHRPYSF 357 (958)
Q Consensus 290 ~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g-~~~~--------l~~~-~~~~~~~~SpDG-k~l~~~~~~~~~~~ 357 (958)
....|.++++ .+ .... +... ..+..++|+||| +.|+..+.
T Consensus 196 ----------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~------ 247 (447)
T 3dw8_B 196 ----------------------DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS------ 247 (447)
T ss_dssp ----------------------CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET------
T ss_pred ----------------------CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC------
Confidence 1133556666 22 2221 2222 668899999999 77777763
Q ss_pred cccCCCCCceeEEEeccCceE-----EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccC
Q 002164 358 IVPCGRFPRQVGVWTTDGIFV-----RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPR 432 (958)
Q Consensus 358 ~~~~~~~~~~i~l~d~~~~~~-----~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~ 432 (958)
++.|.+||+..+.. +.+........ ...+......+..+.|+|||+.|+.. +.
T Consensus 248 -------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~-------------~~- 305 (447)
T 3dw8_B 248 -------KGTIRLCDMRASALCDRHSKLFEEPEDPSN-RSFFSEIISSISDVKFSHSGRYMMTR-------------DY- 305 (447)
T ss_dssp -------TSCEEEEETTTCSSSCTTCEEECCC------CCHHHHHTTCEEEEEECTTSSEEEEE-------------ES-
T ss_pred -------CCeEEEEECcCCccccceeeEeccCCCccc-cccccccCceEEEEEECCCCCEEEEe-------------eC-
Confidence 34899999986542 33332211000 00011111256789999999988763 34
Q ss_pred CeEEEEeCCCCC-CCCceEEEeeccc---------------cCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 433 DIIYTQQAEPVQ-GEGPEILHKLDLR---------------YGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 433 ~~l~~~~~~~~~-g~~~~~l~~~~~~---------------~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
+.|.+|++ .. +.....+...... ...+.|+|||++|+..+.++ .|+++++.++
T Consensus 306 ~~v~iwd~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg----~v~iwd~~~~ 374 (447)
T 3dw8_B 306 LSVKVWDL--NMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN----FFRMFDRNTK 374 (447)
T ss_dssp SEEEEEET--TCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT----EEEEEETTTC
T ss_pred CeEEEEeC--CCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCC----EEEEEEcCCC
Confidence 78999996 22 3344444433321 12389999999996654332 3666666654
No 232
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.57 E-value=1.8e-12 Score=140.21 Aligned_cols=269 Identities=11% Similarity=0.146 Sum_probs=169.7
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
..+....|+|||++|+.... ...|.+|+..+++........... +..++|+|||+.|+...
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~---------dg~i~iw~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~------ 84 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSA---------DKLIKIWGAYDGKFEKTISGHKLG----ISDVAWSSDSNLLVSAS------ 84 (312)
T ss_dssp SCEEEEEECTTSSEEEEEET---------TSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEE------
T ss_pred CcEEEEEECCCCCEEEEeeC---------CCeEEEEeCCCcccchhhccCCCc----eEEEEEcCCCCEEEEEC------
Confidence 46889999999999988652 457888898887766554433322 77899999999998761
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccccCCCCcE
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKY 345 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDGk~ 345 (958)
....|.++++ +++. ..+... ..+..+.|+|||+.
T Consensus 85 -------------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 85 -------------------------------------------DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp -------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred -------------------------------------------CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 2245777888 6643 344433 66788899999999
Q ss_pred EEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
|+..+.+ +.+.+||+.++. .+.+..+. ..+..+.|+|||+.++..
T Consensus 122 l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~-------- 167 (312)
T 4ery_A 122 IVSGSFD-------------ESVRIWDVKTGKCLKTLPAHS-------------DPVSAVHFNRDGSLIVSS-------- 167 (312)
T ss_dssp EEEEETT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEEeCC-------------CcEEEEECCCCEEEEEecCCC-------------CcEEEEEEcCCCCEEEEE--------
Confidence 9887733 489999998544 33333221 345678999999977663
Q ss_pred cccccccCCeEEEEeCCCCCCCCceEEE-eeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCC
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEGPEILH-KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS 503 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~-~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 503 (958)
+..+.|.+|++ ..+.....+. .....+..+.|+|+|+.|+.....+ .|.++++..+ +.........
T Consensus 168 -----~~d~~i~~wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~--~~~~~~~~~~ 234 (312)
T 4ery_A 168 -----SYDGLCRIWDT--ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN----TLKLWDYSKG--KCLKTYTGHK 234 (312)
T ss_dssp -----ETTSCEEEEET--TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT----EEEEEETTTT--EEEEEECSSC
T ss_pred -----eCCCcEEEEEC--CCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC----eEEEEECCCC--cEEEEEEecC
Confidence 44567899996 2232223332 2233456689999999988775433 3556666653 2233332222
Q ss_pred ccccCCCCCCceEec-cCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEee
Q 002164 504 EDVYSDPGSPMMRRT-STGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVAL 582 (958)
Q Consensus 504 ~~~~~~~~~~~~~~s-pdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~ 582 (958)
...+. ....++ ++|++|+.... ...|++||+.+++.......... .+.
T Consensus 235 ~~~~~----~~~~~~~~~~~~l~sg~~---------------------dg~i~vwd~~~~~~~~~~~~h~~----~v~-- 283 (312)
T 4ery_A 235 NEKYC----IFANFSVTGGKWIVSGSE---------------------DNLVYIWNLQTKEIVQKLQGHTD----VVI-- 283 (312)
T ss_dssp CSSSC----CCEEEECSSSCEEEECCT---------------------TSCEEEEETTTCCEEEEECCCSS----CEE--
T ss_pred CceEE----EEEEEEeCCCcEEEEECC---------------------CCEEEEEECCCchhhhhhhccCC----cEE--
Confidence 21111 113344 56666665441 12599999998877655543322 122
Q ss_pred cCCCccccccccCCEEEEEE
Q 002164 583 MSDQTEGDLYLNQLKILTSK 602 (958)
Q Consensus 583 ~~~~~~~~~s~dg~~l~~~~ 602 (958)
..+|+|+++.++...
T Consensus 284 -----~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 284 -----STACHPTENIIASAA 298 (312)
T ss_dssp -----EEEECSSSSEEEEEE
T ss_pred -----EEeecCcCCceEEEE
Confidence 246788887665443
No 233
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.57 E-value=2.8e-14 Score=151.83 Aligned_cols=194 Identities=17% Similarity=0.146 Sum_probs=126.6
Q ss_pred eEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHHHH
Q 002164 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAVE 748 (958)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~av~ 748 (958)
|.||++||.+.... .| ......|+++||.|++ .|.+|+|.+.... .......+|+.++++
T Consensus 24 ~pvvllHG~~~~~~-----------~~----~~~~~~L~~~g~~vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~ 85 (279)
T 1hkh_A 24 QPVVLIHGYPLDGH-----------SW----ERQTRELLAQGYRVIT---YDRRGFGGSSKVNTGYDYDTFAADLHTVLE 85 (279)
T ss_dssp EEEEEECCTTCCGG-----------GG----HHHHHHHHHTTEEEEE---ECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCchhh-----------HH----hhhHHHHHhCCcEEEE---eCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 34888999642111 11 2345678889999999 6667888775432 234566778888777
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEeccCCCCCCC----CCCcccc-----------cc-h--
Q 002164 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-LFCCGIARSGAYNRTLT----PFGFQNE-----------DR-T-- 809 (958)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~~~~~~~~~----~~~~~~~-----------~~-~-- 809 (958)
.+ +.+++.++||||||.+++.+|.++|+ +++++|++++....... ....... .. .
T Consensus 86 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (279)
T 1hkh_A 86 TL------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWF 159 (279)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred hc------CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhH
Confidence 65 23589999999999999999999998 99999999874321110 0000000 00 0
Q ss_pred ------hhh---------cHH---HHH------------------hcCcccccCCC---CCCEEEEeeCCCCCCCCChHH
Q 002164 810 ------LWE---------ATS---TYV------------------EMSPFMSANKL---KKPILLVHGEEDNNSGTLTMQ 850 (958)
Q Consensus 810 ------~~~---------~~~---~~~------------------~~sp~~~~~~~---~~P~Lii~G~~D~~v~~~~~~ 850 (958)
.+. ..+ .+. ..+....+.++ ++|+|++||++|..+| ++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~--~~~ 237 (279)
T 1hkh_A 160 TDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILP--IDA 237 (279)
T ss_dssp HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSC--TTT
T ss_pred HHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCC--hHH
Confidence 000 000 000 01111234556 8999999999999998 777
Q ss_pred H-HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 851 S-DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 851 ~-~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
+ +++.+.+. ..+++++++++|... .++...+.+.+.+||.
T Consensus 238 ~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 238 TARRFHQAVP----EADYVEVEGAPHGLL-WTHADEVNAALKTFLA 278 (279)
T ss_dssp THHHHHHHCT----TSEEEEETTCCTTHH-HHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC----CeeEEEeCCCCccch-hcCHHHHHHHHHHHhh
Confidence 6 66766554 358999999999874 4566778888888885
No 234
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.57 E-value=1.3e-14 Score=161.55 Aligned_cols=71 Identities=10% Similarity=0.116 Sum_probs=60.2
Q ss_pred ccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC-CCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 825 SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPF-ESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 825 ~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~-~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
.+.++++|+|+++|++|..+| +..++++++.++..+..++++++++ +||... .+....+.+.|.+||.+++
T Consensus 302 ~l~~i~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 302 ALSNVEANVLMIPCKQDLLQP--SRYNYKMVDLLQKQGKYAEVYEIESINGHMAG-VFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp HHHTCCSEEEEECBTTCSSSC--THHHHHHHHHHHHTTCCEEECCBCCTTGGGHH-HHCGGGTHHHHHHHHHSCC
T ss_pred HHhhCCCCEEEEecCCccccC--HHHHHHHHHHHHhcCCCceEEEcCCCCCCcch-hcCHHHHHHHHHHHHHhhh
Confidence 456789999999999999998 9999999999988777799999998 999863 3445677888999998765
No 235
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.57 E-value=6.5e-14 Score=152.07 Aligned_cols=214 Identities=18% Similarity=0.181 Sum_probs=128.4
Q ss_pred EEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCC
Q 002164 642 IKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTT 721 (958)
Q Consensus 642 ~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~ 721 (958)
.+++..+|.+++....-++ + .|.||++||++.... + ......|...||.|++ .
T Consensus 17 ~~~~~~~g~~l~~~~~g~~------~--g~~vvllHG~~~~~~------------~----~~~~~~~~~~~~~vi~---~ 69 (317)
T 1wm1_A 17 GWLDTGDGHRIYWELSGNP------N--GKPAVFIHGGPGGGI------------S----PHHRQLFDPERYKVLL---F 69 (317)
T ss_dssp EEEECSSSCEEEEEEEECT------T--SEEEEEECCTTTCCC------------C----GGGGGGSCTTTEEEEE---E
T ss_pred eEEEcCCCcEEEEEEcCCC------C--CCcEEEECCCCCccc------------c----hhhhhhccccCCeEEE---E
Confidence 3466668888876655332 1 355889999642110 0 0011233457999999 6
Q ss_pred CCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCC
Q 002164 722 PIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (958)
Q Consensus 722 ~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~ 797 (958)
|.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|+.++.....
T Consensus 70 D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 143 (317)
T 1wm1_A 70 DQRGCGRSRPHASLDNNTTWHLVADIERLREMA------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRK 143 (317)
T ss_dssp CCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCH
T ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHHc------CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCch
Confidence 667888875431 12345566665554432 33589999999999999999999999999999987542210
Q ss_pred -------------CCC--C-----Ccccccc-----------------------hhh-------------------hcHH
Q 002164 798 -------------LTP--F-----GFQNEDR-----------------------TLW-------------------EATS 815 (958)
Q Consensus 798 -------------~~~--~-----~~~~~~~-----------------------~~~-------------------~~~~ 815 (958)
..+ + ....... ..| ..+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (317)
T 1wm1_A 144 QRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDD 223 (317)
T ss_dssp HHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHH
T ss_pred hhhhHHhhccchhhcHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccc
Confidence 000 0 0000000 000 0000
Q ss_pred ---H-------H-H--h---cC--cccccCCCC-CCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCcc
Q 002164 816 ---T-------Y-V--E---MS--PFMSANKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHG 876 (958)
Q Consensus 816 ---~-------~-~--~---~s--p~~~~~~~~-~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~ 876 (958)
. + . . .. ....+.+++ +|+|+++|++|..+| +..+.++.+.+.. .+++++|++||.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~--~~~~~~l~~~~p~----~~~~~i~~~gH~ 297 (317)
T 1wm1_A 224 FALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQ--VQNAWDLAKAWPE----AELHIVEGAGHS 297 (317)
T ss_dssp HHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSC--HHHHHHHHHHCTT----SEEEEETTCCSS
T ss_pred hhhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCC--HHHHHHHHhhCCC----ceEEEECCCCCC
Confidence 0 0 0 0 00 122345564 999999999999998 8888888777653 489999999998
Q ss_pred CCCcccHHHHHHHHHHHH
Q 002164 877 YAARESIMHVLWETDRWL 894 (958)
Q Consensus 877 ~~~~~~~~~~~~~i~~fl 894 (958)
...++....+...+.+|+
T Consensus 298 ~~~~~~~~~~~~~i~~f~ 315 (317)
T 1wm1_A 298 YDEPGILHQLMIATDRFA 315 (317)
T ss_dssp TTSHHHHHHHHHHHHHHT
T ss_pred CCCcchHHHHHHHHHHHh
Confidence 743333444444555544
No 236
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.57 E-value=4.1e-14 Score=151.15 Aligned_cols=215 Identities=16% Similarity=0.119 Sum_probs=132.9
Q ss_pred EeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCC
Q 002164 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (958)
Q Consensus 645 ~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~ 724 (958)
...+|..++....-++ ..|+||++||...... ....+. .....|++ +|.|++ .|.+
T Consensus 12 ~~~~g~~l~y~~~g~~--------g~p~vvllHG~~~~~~-----------~~~~~~-~~~~~L~~-~~~vi~---~D~~ 67 (285)
T 1c4x_A 12 FPSGTLASHALVAGDP--------QSPAVVLLHGAGPGAH-----------AASNWR-PIIPDLAE-NFFVVA---PDLI 67 (285)
T ss_dssp ECCTTSCEEEEEESCT--------TSCEEEEECCCSTTCC-----------HHHHHG-GGHHHHHT-TSEEEE---ECCT
T ss_pred EEECCEEEEEEecCCC--------CCCEEEEEeCCCCCCc-----------chhhHH-HHHHHHhh-CcEEEE---ecCC
Confidence 3347777776544211 1477999999521000 000011 12334554 499999 5666
Q ss_pred CCCCcccch---hhHHHH----HHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCC
Q 002164 725 GEGDEEAND---RFVEQL----VACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (958)
Q Consensus 725 G~G~~~~~~---~~~~~~----~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~ 797 (958)
|+|.+.... ...... .+|+.+.++.+ + .+++.|+||||||.+++.+|.++|++++++|++++.....
T Consensus 68 G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 141 (285)
T 1c4x_A 68 GFGQSEYPETYPGHIMSWVGMRVEQILGLMNHF---G---IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPM 141 (285)
T ss_dssp TSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH---T---CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCC
T ss_pred CCCCCCCCCCcccchhhhhhhHHHHHHHHHHHh---C---CCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCC
Confidence 888775432 123444 56665555543 2 3589999999999999999999999999999998754211
Q ss_pred CC--C-----CC------------------cccccc----h----hh---hcHHHHH---h------------cCccccc
Q 002164 798 LT--P-----FG------------------FQNEDR----T----LW---EATSTYV---E------------MSPFMSA 826 (958)
Q Consensus 798 ~~--~-----~~------------------~~~~~~----~----~~---~~~~~~~---~------------~sp~~~~ 826 (958)
.. . +. +..... . .+ ..+..+. . ......+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (285)
T 1c4x_A 142 NARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATL 221 (285)
T ss_dssp SSCCHHHHHHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHH
T ss_pred CccchhHHHHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhh
Confidence 00 0 00 000000 0 00 0010000 0 0112345
Q ss_pred CCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 827 NKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
.++++|+|+++|++|..+| +..++++++.++ ..+++++|++||... .+....+.+.+.+||.+
T Consensus 222 ~~i~~P~lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 222 GRLPHDVLVFHGRQDRIVP--LDTSLYLTKHLK----HAELVVLDRCGHWAQ-LERWDAMGPMLMEHFRA 284 (285)
T ss_dssp TTCCSCEEEEEETTCSSSC--THHHHHHHHHCS----SEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEEeCCCeeeC--HHHHHHHHHhCC----CceEEEeCCCCcchh-hcCHHHHHHHHHHHHhc
Confidence 7889999999999999998 888888777653 469999999999864 45567788888888864
No 237
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.57 E-value=1.6e-12 Score=140.21 Aligned_cols=254 Identities=9% Similarity=0.039 Sum_probs=163.6
Q ss_pred eeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEE
Q 002164 179 EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (958)
Q Consensus 179 ~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l 258 (958)
.+.+.++. ..+...+|||||++|+... ....|.+|++++++..+........ +..++|+|||++|
T Consensus 6 ~~~~~~h~--~~V~~~~fsp~~~~l~s~~---------~dg~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l 70 (304)
T 2ynn_A 6 KKTFSNRS--DRVKGIDFHPTEPWVLTTL---------YSGRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWI 70 (304)
T ss_dssp EEEEEEEC--SCEEEEEECSSSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEE
T ss_pred EEeecCCC--CceEEEEECCCCCEEEEEc---------CCCcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEE
Confidence 34454433 4689999999999998865 2568889999887665433333322 6788999999999
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-cccc
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYT 335 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~ 335 (958)
+... ....|.++++ +|+. ..+... ..+.
T Consensus 71 ~s~s-------------------------------------------------~d~~i~vwd~~~~~~~~~~~~h~~~v~ 101 (304)
T 2ynn_A 71 IVGS-------------------------------------------------DDFRIRVFNYNTGEKVVDFEAHPDYIR 101 (304)
T ss_dssp EEEE-------------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEEC-------------------------------------------------CCCEEEEEECCCCcEEEEEeCCCCcEE
Confidence 8762 2245777888 6643 344444 6788
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCc-eEEE-eccCCccccCcccccccccCcceeeeecC-CCC
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSD-KPS 412 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~-~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~~spD-G~~ 412 (958)
.++|+||+++|+..+. ++.|.+||+.++ .... +..+ ...+..+.|+|+ +..
T Consensus 102 ~~~~~~~~~~l~sgs~-------------D~~v~lWd~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 102 SIAVHPTKPYVLSGSD-------------DLTVKLWNWENNWALEQTFEGH-------------EHFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEECSSSSEEEEEET-------------TSCEEEEEGGGTTEEEEEECCC-------------CSCEEEEEECTTCTTE
T ss_pred EEEEcCCCCEEEEECC-------------CCeEEEEECCCCcchhhhhccc-------------CCcEEEEEECCCCCCE
Confidence 9999999999987763 348999999854 3322 2221 134578999995 555
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe-eccccCceeeec--CCceEEEEEeccccceEEEEEcCC
Q 002164 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCD--DSLALVYESWYKTRRTRTWVISPG 489 (958)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~-~~~~~~~~~~sp--Dg~~l~~~~~~~~~~~~l~~~~~~ 489 (958)
++.. +..+.|.+|++ ..+.....+.. ....+..+.|+| |++.|+..+.++ .|.++|+.
T Consensus 156 l~sg-------------s~D~~v~iwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~----~i~iWd~~ 216 (304)
T 2ynn_A 156 FASG-------------CLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL----TIKIWDYQ 216 (304)
T ss_dssp EEEE-------------ETTSEEEEEET--TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS----EEEEEETT
T ss_pred EEEE-------------eCCCeEEEEEC--CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC----eEEEEeCC
Confidence 5442 44667899996 23333333432 234455677776 677777665443 35555655
Q ss_pred CCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEec
Q 002164 490 SKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~ 569 (958)
++ +...........+.. +.|+|+++.|+....+ ..|.+||+.+++..+...
T Consensus 217 ~~--~~~~~~~~h~~~v~~------~~~~p~~~~l~s~s~D---------------------g~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 217 TK--SCVATLEGHMSNVSF------AVFHPTLPIIISGSED---------------------GTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp TT--EEEEEEECCSSCEEE------EEECSSSSEEEEEETT---------------------SCEEEEETTTCCEEEEEC
T ss_pred CC--ccceeeCCCCCCEEE------EEECCCCCEEEEEcCC---------------------CeEEEEECCCCceeeecc
Confidence 53 333334444444333 7899999988877621 259999999888766554
Q ss_pred C
Q 002164 570 S 570 (958)
Q Consensus 570 ~ 570 (958)
.
T Consensus 268 ~ 268 (304)
T 2ynn_A 268 V 268 (304)
T ss_dssp C
T ss_pred C
Confidence 3
No 238
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.56 E-value=8.3e-13 Score=149.03 Aligned_cols=265 Identities=12% Similarity=0.093 Sum_probs=171.6
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
..+....|+|||+.|+.... ...|.+||+.+++..+........ +..++|+|||+.|+....
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~---------Dg~i~vwd~~~~~~~~~l~~h~~~----V~~v~~~~~~~~l~sgs~----- 170 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASE---------DATIKVWDYETGDFERTLKGHTDS----VQDISFDHSGKLLASCSA----- 170 (410)
T ss_dssp SCEEEEEECSSSSEEEEEES---------SSCEEEEETTTCCCCEEECCCSSC----EEEEEECTTSSEEEEEET-----
T ss_pred CcEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCcEEEEEeccCCc----EEEEEEcCCCCEEEEEeC-----
Confidence 56889999999998887552 568899999988765544333322 778999999998887621
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccccCCCCcE
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKY 345 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDGk~ 345 (958)
...|.++++ +++. +.+... ..+..++|+|||++
T Consensus 171 --------------------------------------------D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 171 --------------------------------------------DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp --------------------------------------------TSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred --------------------------------------------CCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 123556676 5543 334333 67889999999999
Q ss_pred EEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
|+..+. ++.|.+||+.++. .+.+..+. ..+..+.|+|||+.++..
T Consensus 207 l~s~s~-------------D~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~g~~l~s~-------- 252 (410)
T 1vyh_C 207 IVSASR-------------DKTIKMWEVQTGYCVKTFTGHR-------------EWVRMVRPNQDGTLIASC-------- 252 (410)
T ss_dssp EEEEET-------------TSEEEEEETTTCCEEEEEECCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEEeC-------------CCeEEEEECCCCcEEEEEeCCC-------------ccEEEEEECCCCCEEEEE--------
Confidence 987763 3489999998554 33333221 345678999999977662
Q ss_pred cccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecC--------------------CceEEEEEeccccceEEE
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDD--------------------SLALVYESWYKTRRTRTW 484 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spD--------------------g~~l~~~~~~~~~~~~l~ 484 (958)
+..+.|.+|++ ..+.....+..+...+..+.|+|+ |..|+..+.++ .|.
T Consensus 253 -----s~D~~v~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~----~i~ 321 (410)
T 1vyh_C 253 -----SNDQTVRVWVV--ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK----TIK 321 (410)
T ss_dssp -----ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS----EEE
T ss_pred -----cCCCeEEEEEC--CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC----eEE
Confidence 44567889986 233333444455666778899997 44565554332 356
Q ss_pred EEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCce
Q 002164 485 VISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSK 564 (958)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~ 564 (958)
++|+.++ ............+.. +.|+|+|++|+....+ ..|++||+.+++.
T Consensus 322 iwd~~~~--~~~~~~~~h~~~v~~------v~~~~~g~~l~s~s~D---------------------~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 322 MWDVSTG--MCLMTLVGHDNWVRG------VLFHSGGKFILSCADD---------------------KTLRVWDYKNKRC 372 (410)
T ss_dssp EEETTTT--EEEEEEECCSSCEEE------EEECSSSSCEEEEETT---------------------TEEEEECCTTSCC
T ss_pred EEECCCC--ceEEEEECCCCcEEE------EEEcCCCCEEEEEeCC---------------------CeEEEEECCCCce
Confidence 6666653 223333333333333 7899999998876521 2599999988765
Q ss_pred EEEecCCcccccceeEeecCCCccccccccCCEEEE
Q 002164 565 ERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILT 600 (958)
Q Consensus 565 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 600 (958)
......... .+. ..+|+|++..++.
T Consensus 373 ~~~~~~h~~----~v~-------~l~~~~~~~~l~s 397 (410)
T 1vyh_C 373 MKTLNAHEH----FVT-------SLDFHKTAPYVVT 397 (410)
T ss_dssp CEEEECCSS----CEE-------EEEECSSSSCEEE
T ss_pred EEEEcCCCC----cEE-------EEEEcCCCCEEEE
Confidence 444332221 122 2468888876553
No 239
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.56 E-value=6e-13 Score=152.32 Aligned_cols=193 Identities=12% Similarity=0.052 Sum_probs=126.9
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcC--CCceeeccC---CCCccccccccceEEecCCeEEEEEecC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD--TGKARPLFQ---SPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~--~g~~~~lt~---~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (958)
.+..++|||||++|+++.. ....|.+|++. +++..+... .+.. +..++|+|||+.|++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~--------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-----v~~~~~sp~~~~l~~~~-- 168 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD--------SDKSLLVFDVDKTSKNVLKLRKRFCFSKR-----PNAISIAEDDTTVIIAD-- 168 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG--------GGTEEEEEEECSSSSSCEEEEEEEECSSC-----EEEEEECTTSSEEEEEE--
T ss_pred ceEEEEEcCCCCEEEEEEC--------CCCeEEEEECcCCCCceeeeeecccCCCC-----ceEEEEcCCCCEEEEEe--
Confidence 4788999999999866542 24567777777 666544432 1221 67899999999998761
Q ss_pred CCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-----ecCCC-cccccc
Q 002164 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-----EIGPP-AVYTSL 337 (958)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-----~l~~~-~~~~~~ 337 (958)
....++.+++ ++... .+... ..+..+
T Consensus 169 -----------------------------------------------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 201 (450)
T 2vdu_B 169 -----------------------------------------------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDV 201 (450)
T ss_dssp -----------------------------------------------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEE
T ss_pred -----------------------------------------------CCCcEEEEecCCcccccccceeeecccCceEEE
Confidence 2345888888 66433 22222 667889
Q ss_pred ccCCC---CcEEEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccccCcccccccccCcceeeeecCCCCc
Q 002164 338 DPSPD---EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (958)
Q Consensus 338 ~~SpD---Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l 413 (958)
+|+|| |++|+..+.+ +.|.+||+..+. ...+.. +....+..+.|+ ||+.|
T Consensus 202 ~~sp~~~~~~~l~s~~~d-------------~~i~vwd~~~~~~~~~~~~------------~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 202 HLIKDSDGHQFIITSDRD-------------EHIKISHYPQCFIVDKWLF------------GHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp EEEECTTSCEEEEEEETT-------------SCEEEEEESCTTCEEEECC------------CCSSCEEEEEEC-STTEE
T ss_pred EEcCCCCCCcEEEEEcCC-------------CcEEEEECCCCceeeeeec------------CCCCceEEEEEC-CCCEE
Confidence 99999 8888877633 489999998543 323221 111345789999 99987
Q ss_pred eEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe-------------------------eccccCceeeecCCc
Q 002164 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-------------------------LDLRYGGISWCDDSL 468 (958)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~-------------------------~~~~~~~~~~spDg~ 468 (958)
+.. +..+.|.+|++ ..+.....+.. ....+..+.|+|||+
T Consensus 256 ~s~-------------~~d~~v~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 256 LSA-------------GGDDKIFAWDW--KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp EEE-------------ESSSEEEEEET--TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred EEE-------------eCCCeEEEEEC--CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 763 44668999996 23333333321 123456789999999
Q ss_pred eEEEEEeccccceEEEEE
Q 002164 469 ALVYESWYKTRRTRTWVI 486 (958)
Q Consensus 469 ~l~~~~~~~~~~~~l~~~ 486 (958)
.|+.....++ ...||.+
T Consensus 321 ~l~~~~~~d~-~i~iw~~ 337 (450)
T 2vdu_B 321 FVAFFVEATK-CIIILEM 337 (450)
T ss_dssp EEEEEETTCS-EEEEEEE
T ss_pred EEEEEECCCC-eEEEEEe
Confidence 9988874433 2566766
No 240
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.56 E-value=1.3e-12 Score=144.27 Aligned_cols=276 Identities=11% Similarity=0.121 Sum_probs=168.9
Q ss_pred eeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEE
Q 002164 179 EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (958)
Q Consensus 179 ~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l 258 (958)
.+.+.++. ..+....|+|||++|+... ....|.+|+..+++.......+... +..++|+|||+.|
T Consensus 57 ~~~l~gH~--~~V~~~~~s~d~~~l~s~s---------~Dg~v~vWd~~~~~~~~~~~~~~~~----v~~~~~sp~g~~l 121 (354)
T 2pbi_B 57 RRTLKGHG--NKVLCMDWCKDKRRIVSSS---------QDGKVIVWDSFTTNKEHAVTMPCTW----VMACAYAPSGCAI 121 (354)
T ss_dssp EEEEECCS--SCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTCCEEEEEECSSSC----CCEEEECTTSSEE
T ss_pred EEEecCCC--CeEEEEEECCCCCEEEEEe---------CCCeEEEEECCCCCcceEEecCCCC----EEEEEECCCCCEE
Confidence 44555543 5689999999999988865 2568889998877655443333322 6789999999999
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC-------eeeecCC
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-------TVKEIGP 330 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g-------~~~~l~~ 330 (958)
+.... ...+.++++ .+ ....+..
T Consensus 122 asg~~-------------------------------------------------d~~i~v~~~~~~~~~~~~~~~~~~~~ 152 (354)
T 2pbi_B 122 ACGGL-------------------------------------------------DNKCSVYPLTFDKNENMAAKKKSVAM 152 (354)
T ss_dssp EEEST-------------------------------------------------TSEEEEEECCCCTTCCSGGGCEEEEE
T ss_pred EEeeC-------------------------------------------------CCCEEEEEEeccccccccccceeeec
Confidence 97611 122333333 11 1122222
Q ss_pred C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeec
Q 002164 331 P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS 408 (958)
Q Consensus 331 ~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp 408 (958)
. ..+....|+||++.|+..+. ++.+.+||+..+.. +.+..+. ..+..+.|+|
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~-------------D~~v~lwd~~~~~~~~~~~~h~-------------~~v~~~~~~~ 206 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASG-------------DGTCALWDVESGQLLQSFHGHG-------------ADVLCLDLAP 206 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEET-------------TSEEEEEETTTCCEEEEEECCS-------------SCEEEEEECC
T ss_pred cCCcEEEEEEeCCCCEEEEEeC-------------CCcEEEEeCCCCeEEEEEcCCC-------------CCeEEEEEEe
Confidence 2 56778899999999987773 34899999986543 3333221 2345567776
Q ss_pred --CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEE
Q 002164 409 --DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (958)
Q Consensus 409 --DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (958)
+|+.++.. +..+.|.+||+ ..+.....+..+...+..++|+|+|+.|+..+.++. .++|
T Consensus 207 ~~~g~~l~sg-------------s~Dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~--v~lw-- 267 (354)
T 2pbi_B 207 SETGNTFVSG-------------GCDKKAMVWDM--RSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT--CRLY-- 267 (354)
T ss_dssp CSSCCEEEEE-------------ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--EEEE--
T ss_pred CCCCCEEEEE-------------eCCCeEEEEEC--CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe--EEEE--
Confidence 46655542 44567999996 233333444555667888999999998887765443 4555
Q ss_pred cCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEE
Q 002164 487 SPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKER 566 (958)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~ 566 (958)
|+..+ ............ . ....+.|+|+|++|+....+ ..|.+||+.+++...
T Consensus 268 d~~~~--~~~~~~~~~~~~-~---~~~~~~~s~~g~~l~~g~~d---------------------~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 268 DLRAD--REVAIYSKESII-F---GASSVDFSLSGRLLFAGYND---------------------YTINVWDVLKGSRVS 320 (354)
T ss_dssp ETTTT--EEEEEECCTTCC-S---CEEEEEECTTSSEEEEEETT---------------------SCEEEEETTTCSEEE
T ss_pred ECCCC--cEEEEEcCCCcc-c---ceeEEEEeCCCCEEEEEECC---------------------CcEEEEECCCCceEE
Confidence 54442 222222211110 0 01127899999988877621 259999998877554
Q ss_pred EecCCcccccceeEeecCCCccccccccCCEEEEE
Q 002164 567 IWESDKEKYYETTVALMSDQTEGDLYLNQLKILTS 601 (958)
Q Consensus 567 l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 601 (958)
....... .+. ..+|+|||+.++..
T Consensus 321 ~l~~h~~----~v~-------~l~~spdg~~l~sg 344 (354)
T 2pbi_B 321 ILFGHEN----RVS-------TLRVSPDGTAFCSG 344 (354)
T ss_dssp EECCCSS----CEE-------EEEECTTSSCEEEE
T ss_pred EEECCCC----cEE-------EEEECCCCCEEEEE
Confidence 4332221 122 25789999866543
No 241
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.56 E-value=7.1e-14 Score=149.36 Aligned_cols=174 Identities=10% Similarity=0.060 Sum_probs=116.3
Q ss_pred HHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 002164 706 LLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (958)
Q Consensus 706 ~~la~~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 782 (958)
..|+++ |.|++ .|.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+|+.+|.++|+
T Consensus 58 ~~L~~~-~~vi~---~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~va~~~A~~~p~ 127 (286)
T 2puj_A 58 PFVDAG-YRVIL---KDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL------DIDRAHLVGNAMGGATALNFALEYPD 127 (286)
T ss_dssp HHHHTT-CEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGG
T ss_pred HHHhcc-CEEEE---ECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChH
Confidence 455554 99999 6667888876542 12345566665555442 33689999999999999999999999
Q ss_pred ceeEEEEeccCCCCCC--C--CC-------Cc---cc-------------cc--------chhhh----cHHHH---H--
Q 002164 783 LFCCGIARSGAYNRTL--T--PF-------GF---QN-------------ED--------RTLWE----ATSTY---V-- 818 (958)
Q Consensus 783 ~~~a~v~~~~~~~~~~--~--~~-------~~---~~-------------~~--------~~~~~----~~~~~---~-- 818 (958)
+++++|++++...... . .. .+ .. .. ...+. .+..+ .
T Consensus 128 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (286)
T 2puj_A 128 RIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLIS 207 (286)
T ss_dssp GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 9999999987542110 0 00 00 00 00 00000 01000 0
Q ss_pred -------hcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHH
Q 002164 819 -------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETD 891 (958)
Q Consensus 819 -------~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~ 891 (958)
..+....+.++++|+|+++|++|..+| +..++++.+.++ ..+++++|++||... .+....+.+.+.
T Consensus 208 ~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~ 280 (286)
T 2puj_A 208 AQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP--LDHGLKLLWNID----DARLHVFSKCGAWAQ-WEHADEFNRLVI 280 (286)
T ss_dssp HHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHSS----SEEEEEESSCCSCHH-HHTHHHHHHHHH
T ss_pred HhhhhccccchhhHHhhcCCCEEEEEECCCCccC--HHHHHHHHHHCC----CCeEEEeCCCCCCcc-ccCHHHHHHHHH
Confidence 112234567789999999999999998 888888877664 369999999999864 456677888889
Q ss_pred HHHHH
Q 002164 892 RWLQK 896 (958)
Q Consensus 892 ~fl~~ 896 (958)
+||.+
T Consensus 281 ~fl~~ 285 (286)
T 2puj_A 281 DFLRH 285 (286)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99864
No 242
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.56 E-value=5.6e-14 Score=140.53 Aligned_cols=183 Identities=9% Similarity=-0.107 Sum_probs=115.0
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC-CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~ 748 (958)
.|+||++||++.... ....+.......|+++ ||.|++++++ |++.. ... ..++
T Consensus 4 ~p~vv~lHG~~~~~~-----------~~~~~~~~~~~~l~~~~g~~vi~~d~~---g~~~~--------~~~----~~~~ 57 (194)
T 2qs9_A 4 PSKAVIVPGNGGGDV-----------TTHGWYGWVKKELEKIPGFQCLAKNMP---DPITA--------RES----IWLP 57 (194)
T ss_dssp CCEEEEECCSSSSCT-----------TTSTTHHHHHHHHTTSTTCCEEECCCS---STTTC--------CHH----HHHH
T ss_pred CCEEEEECCCCCCCc-----------ccchHHHHHHHHHhhccCceEEEeeCC---CCCcc--------cHH----HHHH
Confidence 689999999642100 0001112245567777 9999996554 43211 112 2233
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCC
Q 002164 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANK 828 (958)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 828 (958)
.+.+.-.+ .+++.++|||+||.+++.++.++| ++++|+.++......... ......+.. ......+.+
T Consensus 58 ~~~~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~ 125 (194)
T 2qs9_A 58 FMETELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN---ERASGYFTR------PWQWEKIKA 125 (194)
T ss_dssp HHHHTSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH---HHHTSTTSS------CCCHHHHHH
T ss_pred HHHHHhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh---hHHHhhhcc------cccHHHHHh
Confidence 33343112 368999999999999999999997 999999998754211000 000000000 001112233
Q ss_pred CCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 829 LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 829 ~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
+.+|+|+++|++|..+| ++.+.++++.+ . .++.++++++|.+. .+. .+.+..+++||++...
T Consensus 126 ~~~p~lii~G~~D~~vp--~~~~~~~~~~~-~----~~~~~~~~~gH~~~-~~~-p~~~~~~~~fl~~~~~ 187 (194)
T 2qs9_A 126 NCPYIVQFGSTDDPFLP--WKEQQEVADRL-E----TKLHKFTDCGHFQN-TEF-HELITVVKSLLKVPAL 187 (194)
T ss_dssp HCSEEEEEEETTCSSSC--HHHHHHHHHHH-T----CEEEEESSCTTSCS-SCC-HHHHHHHHHHHTCCCC
T ss_pred hCCCEEEEEeCCCCcCC--HHHHHHHHHhc-C----CeEEEeCCCCCccc-hhC-HHHHHHHHHHHHhhhh
Confidence 46799999999999999 99999998888 3 48899999999975 333 3455667789887653
No 243
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.56 E-value=4.7e-15 Score=157.34 Aligned_cols=220 Identities=10% Similarity=0.039 Sum_probs=133.8
Q ss_pred EEEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEc
Q 002164 639 KELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGG 718 (958)
Q Consensus 639 ~~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~ 718 (958)
.+...++..+| .+......+ ..|+||++||.+... ..| ......|+++||.|++
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~---------~~~~vv~lHG~~~~~-----------~~~----~~~~~~l~~~g~~v~~- 56 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESEG---------EGAPLLMIHGNSSSG-----------AIF----APQLEGEIGKKWRVIA- 56 (279)
T ss_dssp CEEEEEEETTE-EEEEEECCC---------CEEEEEEECCTTCCG-----------GGG----HHHHHSHHHHHEEEEE-
T ss_pred eEEEEEEcCCc-eEEEEecCC---------CCCeEEEECCCCCch-----------hHH----HHHHhHHHhcCCeEEe-
Confidence 34556666554 554433211 268899999964211 111 2334456778999999
Q ss_pred CCCCCCCCCCcccch-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 719 PTTPIIGEGDEEAND-----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 719 ~~~~~~G~G~~~~~~-----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
.+.+|+|.+.... .......+|+.++++.+ +.+++.++|||+||.+++.++.++|+ +.++|+.++.
T Consensus 57 --~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~ 127 (279)
T 4g9e_A 57 --PDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQL------GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTP 127 (279)
T ss_dssp --ECCTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH------TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCC
T ss_pred --ecCCCCCCCCCCCCcccCCCHHHHHHHHHHHHHHh------CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCC
Confidence 5666788775421 12344555555555543 33589999999999999999999998 6666666544
Q ss_pred CCCCCC-------CCCc--c--ccc-----------------chhh-hc------------HHHHH---hcCcccccCCC
Q 002164 794 YNRTLT-------PFGF--Q--NED-----------------RTLW-EA------------TSTYV---EMSPFMSANKL 829 (958)
Q Consensus 794 ~~~~~~-------~~~~--~--~~~-----------------~~~~-~~------------~~~~~---~~sp~~~~~~~ 829 (958)
...... .... . ... ...+ .. ...+. ..+....+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 207 (279)
T 4g9e_A 128 PVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEA 207 (279)
T ss_dssp CCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHC
T ss_pred CCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhc
Confidence 221100 0000 0 000 0000 00 00000 01122235667
Q ss_pred CCCEEEEeeCCCCCCCCChHHHHHHH-HHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhcc
Q 002164 830 KKPILLVHGEEDNNSGTLTMQSDRFF-NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 830 ~~P~Lii~G~~D~~v~~~~~~~~~~~-~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 900 (958)
++|+|+++|++|..+| ++.+.+++ +.+. .++++++|++||... .++...+.+.+.+||.+....
T Consensus 208 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~p~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 208 QLPIAVVNGRDEPFVE--LDFVSKVKFGNLW----EGKTHVIDNAGHAPF-REAPAEFDAYLARFIRDCTQL 272 (279)
T ss_dssp CSCEEEEEETTCSSBC--HHHHTTCCCSSBG----GGSCEEETTCCSCHH-HHSHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEcCCCcccc--hHHHHHHhhccCC----CCeEEEECCCCcchH-HhCHHHHHHHHHHHHHHhhhh
Confidence 8999999999999998 77776665 3332 358889999999863 566778889999999987654
No 244
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.56 E-value=4.7e-12 Score=141.39 Aligned_cols=300 Identities=9% Similarity=0.046 Sum_probs=181.5
Q ss_pred CcccceeecCCC-CeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEec-CCeEEEEEecCCC
Q 002164 189 AKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPLLR 266 (958)
Q Consensus 189 ~~~~~~~wSPDG-~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-DG~~l~~~~~~~~ 266 (958)
..+...+|+||| +.|+.... ...|.+|++.+++......... ....+..++|+| |++.|+...
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~---- 138 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSK---------GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVSS---- 138 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEB---------TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEEE----
T ss_pred CCEEEEEECCCCCCEEEEEcC---------CCeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEEe----
Confidence 468899999999 77777542 5678999999877665543211 111277999999 677777651
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC----ccccccccCC
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP----AVYTSLDPSP 341 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~----~~~~~~~~Sp 341 (958)
....|.++++ ++....+... ..+..++|+|
T Consensus 139 ---------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 139 ---------------------------------------------IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp ---------------------------------------------TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEET
T ss_pred ---------------------------------------------CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECC
Confidence 2245777787 5544444322 4578899999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEecc
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 421 (958)
||+.|+....+ +.|.+||+.+.....+..+. ..+..+.|+|||+.+++.
T Consensus 174 ~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~l~s----- 222 (383)
T 3ei3_B 174 SRQMLATGDST-------------GRLLLLGLDGHEIFKEKLHK-------------AKVTHAEFNPRCDWLMAT----- 222 (383)
T ss_dssp TTTEEEEEETT-------------SEEEEEETTSCEEEEEECSS-------------SCEEEEEECSSCTTEEEE-----
T ss_pred CCCEEEEECCC-------------CCEEEEECCCCEEEEeccCC-------------CcEEEEEECCCCCCEEEE-----
Confidence 99999887633 48999999876666655332 345789999999955553
Q ss_pred CCCcccccccCCeEEEEeCCCCCC-CCceEEEeeccccCceeeec-CCceEEEEEeccccceEEEEEcCCCCCCCcEEEe
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQG-EGPEILHKLDLRYGGISWCD-DSLALVYESWYKTRRTRTWVISPGSKDVAPRILF 499 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g-~~~~~l~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 499 (958)
.+..+.|.+|++..... +...........+..+.|+| ||+.|+....++ .|.++++..+........
T Consensus 223 -------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~ 291 (383)
T 3ei3_B 223 -------SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRN----EIRVYSSYDWSKPDQIII 291 (383)
T ss_dssp -------EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSS----EEEEEETTBTTSCSEEEE
T ss_pred -------EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCC----cEEEEECCCCcccccccc
Confidence 13456789999621111 22333335566788899999 999988775433 366666665422222221
Q ss_pred ccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCccccccee
Q 002164 500 DRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETT 579 (958)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~ 579 (958)
.....+.........|+|++..++......+ .. .+ +....|++||+.+++.......... ...
T Consensus 292 --~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg---~~---s~------s~d~~i~iwd~~~~~~~~~l~~~~~---~~~ 354 (383)
T 3ei3_B 292 --HPHRQFQHLTPIKATWHPMYDLIVAGRYPDD---QL---LL------NDKRTIDIYDANSGGLVHQLRDPNA---AGI 354 (383)
T ss_dssp --CCBCCCTTSCCCCCEECSSSSEEEEECBCCT---TT---CT------TCCCCEEEEETTTCCEEEEECBTTB---CSC
T ss_pred --ccccccccccceEEeccCCCCceEEEecCCc---cc---cc------CCCCeEEEEecCCCceeeeecCCCC---Cce
Confidence 1111111111112468888887765542211 00 11 1234699999998887555443211 000
Q ss_pred EeecCCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002164 580 VALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (958)
Q Consensus 580 ~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~ 618 (958)
. ...+|++||+.++.. . ...+.+|++.+
T Consensus 355 ~------~~~~~s~~g~~l~s~-s----d~~i~iw~~~~ 382 (383)
T 3ei3_B 355 I------SLNKFSPTGDVLASG-M----GFNILIWNRED 382 (383)
T ss_dssp C------CEEEECTTSSEEEEE-E----TTEEEEEECC-
T ss_pred E------EEEEEecCccEEEEe-c----CCcEEEEecCC
Confidence 1 123789999866544 2 25688888653
No 245
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.55 E-value=8.5e-14 Score=150.86 Aligned_cols=120 Identities=14% Similarity=-0.009 Sum_probs=80.3
Q ss_pred EEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCC
Q 002164 641 LIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT 720 (958)
Q Consensus 641 ~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~ 720 (958)
...++..+|..++...+-++ + .|.||++||++.... + ......|..+||.|++
T Consensus 13 ~~~~~~~~g~~l~y~~~G~~------~--g~pvvllHG~~~~~~------------~----~~~~~~~~~~~~~vi~--- 65 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGNP------H--GKPVVMLHGGPGGGC------------N----DKMRRFHDPAKYRIVL--- 65 (313)
T ss_dssp EEEEECSSSCEEEEEEEECT------T--SEEEEEECSTTTTCC------------C----GGGGGGSCTTTEEEEE---
T ss_pred cceEEcCCCCEEEEEecCCC------C--CCeEEEECCCCCccc------------c----HHHHHhcCcCcceEEE---
Confidence 33456668888876655332 1 356889999642110 0 0011133457999999
Q ss_pred CCCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 721 TPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 721 ~~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
.|.+|+|.+.... .......+|+.+.++.+ .-+++.|+||||||.+++.+|.++|++++++|+.++.
T Consensus 66 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 66 FDQRGSGRSTPHADLVDNTTWDLVADIERLRTHL------GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp ECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ECCCCCcCCCCCcccccccHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 6677888885432 12445566666555443 2358999999999999999999999999999998764
No 246
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.55 E-value=5.5e-14 Score=155.49 Aligned_cols=118 Identities=14% Similarity=0.143 Sum_probs=84.7
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++...+-|++ + ..|+||++||.+.... .|. .....|+++||.|++ .+.+|+
T Consensus 10 ~~g~~l~y~~~G~~~----~--~~~~vv~~hG~~~~~~-----------~~~----~~~~~l~~~g~~vi~---~d~~g~ 65 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD----Q--QGPLVVLLHGFPESWY-----------SWR----HQIPALAGAGYRVVA---IDQRGY 65 (356)
T ss_dssp ETTEEEEEEEECCTT----C--CSCEEEEECCTTCCGG-----------GGT----TTHHHHHHTTCEEEE---ECCTTS
T ss_pred cCCeEEEEEEecCCC----C--CCCEEEEECCCCCcHH-----------HHH----HHHHHHHHcCCEEEE---EcCCCC
Confidence 488999888876642 1 2578999999642211 111 235578889999999 555677
Q ss_pred CCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCC
Q 002164 727 GDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (958)
Q Consensus 727 G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (958)
|.+.... .......+|+.++++.+ +.+++.++|||+||.+++.++.++|++++++|++++..
T Consensus 66 g~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 66 GRSSKYRVQKAYRIKELVGDVVGVLDSY------GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp TTSCCCCSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHc------CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 7765432 23455666766666553 44689999999999999999999999999999988654
No 247
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.55 E-value=1.1e-13 Score=154.41 Aligned_cols=178 Identities=11% Similarity=0.044 Sum_probs=113.7
Q ss_pred HHHCCcEEEEcCCCCCCCCCCcccc----------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEEeChHH
Q 002164 708 WLARGFAILGGPTTPIIGEGDEEAN----------------DRFVEQLVACAEAAVEEVVRRGVAHPSKIA-VGGHSYGA 770 (958)
Q Consensus 708 la~~G~~vl~~~~~~~~G~G~~~~~----------------~~~~~~~~~D~~~av~~l~~~~~~d~~~i~-l~G~S~GG 770 (958)
|+++||.|+++|.+|. +|.+... ........+|+.++++.+ +.+++. |+||||||
T Consensus 94 L~~~g~~vi~~D~~G~--~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~~lvGhS~Gg 165 (377)
T 2b61_A 94 LDTDRYFFISSNVLGG--CKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL------GISHLKAIIGGSFGG 165 (377)
T ss_dssp EETTTCEEEEECCTTC--SSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT------TCCCEEEEEEETHHH
T ss_pred cccCCceEEEecCCCC--CCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHc------CCcceeEEEEEChhH
Confidence 5578999999665541 3333221 112344555555554432 345887 99999999
Q ss_pred HHHHHHHHhCCCceeEEEEeccCCCCCCC----------------CCC---cccc-------------------c-----
Q 002164 771 FMTANLLAHAPHLFCCGIARSGAYNRTLT----------------PFG---FQNE-------------------D----- 807 (958)
Q Consensus 771 ~~a~~~a~~~p~~~~a~v~~~~~~~~~~~----------------~~~---~~~~-------------------~----- 807 (958)
.+++.+|.++|++++++|++++....... .|. +... .
T Consensus 166 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (377)
T 2b61_A 166 MQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLA 245 (377)
T ss_dssp HHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHCchhhheeEEeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHH
Confidence 99999999999999999999886432100 000 0000 0
Q ss_pred -------c---------hhhh--------------cH-------HHHHhcC-------cccccCCCCCCEEEEeeCCCCC
Q 002164 808 -------R---------TLWE--------------AT-------STYVEMS-------PFMSANKLKKPILLVHGEEDNN 843 (958)
Q Consensus 808 -------~---------~~~~--------------~~-------~~~~~~s-------p~~~~~~~~~P~Lii~G~~D~~ 843 (958)
. ...+ .. ..+...+ ....+.++++|+|+++|++|..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~ 325 (377)
T 2b61_A 246 KAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQL 325 (377)
T ss_dssp HHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSS
T ss_pred HHhccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCccc
Confidence 0 0000 00 0001111 1345678899999999999999
Q ss_pred CCCChHHHHHHHHHHHhCCCcEEEEEeC-CCCccCCCcccHHHHHHHHHHHHHH
Q 002164 844 SGTLTMQSDRFFNALKGHGALCRLVILP-FESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 844 v~~~~~~~~~~~~~l~~~g~~~~~~~~p-~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
+| +.+..+..+.+......++++++| ++||... .+....+.+.|.+||.+
T Consensus 326 ~~--~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~-~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 326 FK--PIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAF-LVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp SC--HHHHHHHHHHHHHTTCEEEEEEECCTTGGGHH-HHCHHHHHHHHHHHHHT
T ss_pred CC--ccchHHHHHHHHhcCCCceEEEeCCCCCchhh-hcCHHHHHHHHHHHHhc
Confidence 98 865556666666665678999999 9999874 34566788888999865
No 248
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.54 E-value=2.8e-12 Score=143.14 Aligned_cols=304 Identities=10% Similarity=0.051 Sum_probs=176.9
Q ss_pred eeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEE
Q 002164 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (958)
Q Consensus 180 ~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~ 259 (958)
+.+.++. ..+....|||||++|+... ....|.+|++.+++........... +..++|+|||+.|+
T Consensus 60 ~~l~gH~--~~V~~~~~sp~~~~l~s~s---------~D~~v~iWd~~~~~~~~~~~~h~~~----v~~~~~s~~g~~la 124 (380)
T 3iz6_a 60 RTLQGHS--GKVYSLDWTPEKNWIVSAS---------QDGRLIVWNALTSQKTHAIKLHCPW----VMECAFAPNGQSVA 124 (380)
T ss_dssp EEECCCS--SCEEEEEECTTSSCEEEEE---------TTSEEEEEETTTTEEEEEEECCCTT----CCCCEECTTSSEEE
T ss_pred ecccccc--cEEEEEEEcCCCCEEEEEe---------CCCeEEEEECCCCccceEEecCCCC----EEEEEECCCCCEEE
Confidence 3454433 5789999999999998865 2568999999887765443333322 67899999999998
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC--------eeeecCC
Q 002164 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG--------TVKEIGP 330 (958)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g--------~~~~l~~ 330 (958)
....+ ..+.++++ ++ ..+.+..
T Consensus 125 s~~~d-------------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~g 155 (380)
T 3iz6_a 125 CGGLD-------------------------------------------------SACSIFNLSSQADRDGNMPVSRVLTG 155 (380)
T ss_dssp ECCSS-------------------------------------------------SCCEEEECCCCSSCCCSSTTCCBCCC
T ss_pred EeeCC-------------------------------------------------CcEEEEECCCCccccCCccceeeccC
Confidence 66211 12333333 21 1122333
Q ss_pred C-ccccccccCCCCcE-EEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeec
Q 002164 331 P-AVYTSLDPSPDEKY-ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS 408 (958)
Q Consensus 331 ~-~~~~~~~~SpDGk~-l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp 408 (958)
. +.+....|+|++.. |+..+. ++.+.+||+.++........... .+....+..+.|++
T Consensus 156 h~~~v~~~~~~~~~~~~l~s~s~-------------D~~i~~wd~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 156 HKGYASSCQYVPDQETRLITGSG-------------DQTCVLWDVTTGQRISIFGSEFP-------SGHTADVLSLSINS 215 (380)
T ss_dssp CSSCCCCCBCCSSSSSCEEEECT-------------TSCEEEECTTTCCEEEEECCCSS-------SSCCSCEEEEEECS
T ss_pred CCcceEEEEEecCCCCEEEEECC-------------CCcEEEEEcCCCcEEEEeecccC-------CCCccCeEEEEeec
Confidence 3 56778899998664 554442 35899999986554332211100 01123456778876
Q ss_pred -CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEc
Q 002164 409 -DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (958)
Q Consensus 409 -DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~ 487 (958)
|++.++.- +..+.|.+||+. ..+.....+..+...+..+.|+|||+.|+..+.++. |.++|
T Consensus 216 ~~~~~l~sg-------------s~D~~v~~wd~~-~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~----i~lwd 277 (380)
T 3iz6_a 216 LNANMFISG-------------SCDTTVRLWDLR-ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT----CRLFD 277 (380)
T ss_dssp SSCCEEEEE-------------ETTSCEEEEETT-TTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC----EEEEE
T ss_pred CCCCEEEEE-------------ECCCeEEEEECC-CCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe----EEEEE
Confidence 66655442 445678999961 123344556667778899999999999887765443 44445
Q ss_pred CCCCCCCcEEEeccCCcccc-CCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEE
Q 002164 488 PGSKDVAPRILFDRSSEDVY-SDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKER 566 (958)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~ 566 (958)
+.++ .....+........ .......++|+|+|++|+....+ ..|++||+.+++...
T Consensus 278 ~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---------------------g~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 278 MRTG--HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---------------------GDCYVWDTLLAEMVL 334 (380)
T ss_dssp TTTT--EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT---------------------SCEEEEETTTCCEEE
T ss_pred CCCC--cEEEEecccccccccccCceEEEEECCCCCEEEEEECC---------------------CCEEEEECCCCceEE
Confidence 5553 22333222111000 00011127899999988876521 259999998776543
Q ss_pred EecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002164 567 IWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (958)
Q Consensus 567 l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g 619 (958)
....... ... ..-...+|+|||+.++.-.. ...+.+|++.+.
T Consensus 335 ~~~~~~~----~h~---~~v~~l~~s~dg~~l~sgs~----D~~i~iW~~~~~ 376 (380)
T 3iz6_a 335 NLGTLQN----SHE---GRISCLGLSSDGSALCTGSW----DKNLKIWAFSGH 376 (380)
T ss_dssp EECCSCS----SCC---CCCCEEEECSSSSEEEEECT----TSCEEEEECCSS
T ss_pred EEecccC----CCC---CceEEEEECCCCCEEEEeeC----CCCEEEEecCCC
Confidence 3211100 000 11123578999987653322 245788887654
No 249
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.54 E-value=1.3e-12 Score=161.79 Aligned_cols=253 Identities=9% Similarity=0.040 Sum_probs=169.4
Q ss_pred eeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEE
Q 002164 179 EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLL 258 (958)
Q Consensus 179 ~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l 258 (958)
.+.+++++ ..+..++|||||++|++... ...|.+|++.+++........... +..++|+|||++|
T Consensus 6 ~~~~~~h~--~~v~~i~~sp~~~~la~~~~---------~g~v~iwd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l 70 (814)
T 3mkq_A 6 KKTFSNRS--DRVKGIDFHPTEPWVLTTLY---------SGRVEIWNYETQVEVRSIQVTETP----VRAGKFIARKNWI 70 (814)
T ss_dssp EEEEEEEC--SCEEEEEECSSSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEE
T ss_pred ceeeecCC--CceEEEEECCCCCEEEEEeC---------CCEEEEEECCCCceEEEEecCCCc----EEEEEEeCCCCEE
Confidence 34455433 46899999999999999652 568999999887665443323322 7799999999999
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-cccc
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYT 335 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~ 335 (958)
++.. ..+.|.++++ +|+. ..+... ..+.
T Consensus 71 ~~~~-------------------------------------------------~dg~i~vw~~~~~~~~~~~~~~~~~v~ 101 (814)
T 3mkq_A 71 IVGS-------------------------------------------------DDFRIRVFNYNTGEKVVDFEAHPDYIR 101 (814)
T ss_dssp EEEE-------------------------------------------------TTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEEe-------------------------------------------------CCCeEEEEECCCCcEEEEEecCCCCEE
Confidence 9772 2245788888 6643 444444 7788
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCc-eE-EEeccCCccccCcccccccccCcceeeeec-CCCC
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FV-RELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPS 412 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~-~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp-DG~~ 412 (958)
.++|||||++|+..+. ++.+.+|+++++ .. +.+..+. ..+..+.|+| ||+.
T Consensus 102 ~~~~s~~~~~l~~~~~-------------dg~i~vw~~~~~~~~~~~~~~~~-------------~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 102 SIAVHPTKPYVLSGSD-------------DLTVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEECSSSSEEEEEET-------------TSEEEEEEGGGTSEEEEEEECCS-------------SCEEEEEEETTEEEE
T ss_pred EEEEeCCCCEEEEEcC-------------CCEEEEEECCCCceEEEEEcCCC-------------CcEEEEEEEcCCCCE
Confidence 9999999999987763 348999999854 33 2332221 3457899999 7877
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeec--CCceEEEEEeccccceEEEEEcCC
Q 002164 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCD--DSLALVYESWYKTRRTRTWVISPG 489 (958)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~sp--Dg~~l~~~~~~~~~~~~l~~~~~~ 489 (958)
++.. +..+.|.+|++ ..+.....+.... ..+..+.|+| +|+.|+.....+ .|.+++..
T Consensus 156 l~~~-------------~~dg~v~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg----~i~~~d~~ 216 (814)
T 3mkq_A 156 FASG-------------CLDRTVKVWSL--GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL----TIKIWDYQ 216 (814)
T ss_dssp EEEE-------------ETTSEEEEEET--TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTS----EEEEEETT
T ss_pred EEEE-------------eCCCeEEEEEC--CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC----EEEEEECC
Confidence 7663 44567999996 2333444444333 5677899999 898887765332 46666766
Q ss_pred CCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEec
Q 002164 490 SKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~ 569 (958)
++ +...........+.. +.|+|+|+.|+....+ ..|++||+.+++......
T Consensus 217 ~~--~~~~~~~~~~~~v~~------~~~~~~~~~l~~~~~d---------------------g~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 217 TK--SCVATLEGHMSNVSF------AVFHPTLPIIISGSED---------------------GTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp TT--EEEEEEECCSSCEEE------EEECSSSSEEEEEETT---------------------SCEEEEETTTCSEEEEEC
T ss_pred CC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEeCC---------------------CeEEEEECCCCcEEEEee
Confidence 53 333333333333333 7899999988876521 248899998877655544
No 250
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.54 E-value=7e-14 Score=155.87 Aligned_cols=236 Identities=10% Similarity=0.101 Sum_probs=146.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCC-CC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DG 188 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~-~~ 188 (958)
.+..++|||||++||....+ +.|.+|++.+ +....+..+. +.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d---------------------------------~~i~iw~~~~----~~~~~~~~~~~h~ 55 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT---------------------------------NQVELYEQDG----NGWKHARTFSDHD 55 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS---------------------------------SCBCEEEEET----TEEEECCCBCCCS
T ss_pred cEEEEEECCCCCEEEEecCC---------------------------------CEEEEEEccC----CceEEEEEEecCC
Confidence 68899999999999887654 4788999854 3212222122 23
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc----eeeccCCCCccccccccceEEecCCeEEEEEecC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~----~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (958)
..+..+.|+|||++|+.... ...|.+|++.+++ ...+..... .+..++|+|||+.|++..
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~---------d~~v~vwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~-- 119 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQ---------DRNAYVYEKRPDGTWKQTLVLLRLNR-----AATFVRWSPNEDKFAVGS-- 119 (377)
T ss_dssp SCEEEEEECTTTCCEEEEET---------TSSEEEC------CCCCEEECCCCSS-----CEEEEECCTTSSCCEEEE--
T ss_pred ceEEEEEEeCCCCEEEEEeC---------CCeEEEEEcCCCCceeeeeEecccCC-----ceEEEEECCCCCEEEEEe--
Confidence 47899999999999988652 4578888888776 333333222 277899999999988762
Q ss_pred CCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe----eeecCC-C-cccccc
Q 002164 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGP-P-AVYTSL 337 (958)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~----~~~l~~-~-~~~~~~ 337 (958)
....|.++++ +++ .+.+.. . ..+..+
T Consensus 120 -----------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 120 -----------------------------------------------GARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp -----------------------------------------------SSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred -----------------------------------------------cCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 1233566666 443 455554 3 678899
Q ss_pred ccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEecc-CCcccc----Ccc-cccccccCcceeeeecCCC
Q 002164 338 DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD-LPLAED----IPI-AFNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 338 ~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~-~~~~~~----~p~-~~~~~~~~~~~~~~spDG~ 411 (958)
+|+|||++|+..+.+ +.+.+||+..+....-.. .+.... .+. .+ .....+..+.|+|||+
T Consensus 153 ~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 153 DWHPNNVLLAAGCAD-------------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN 218 (377)
T ss_dssp EECTTSSEEEEEESS-------------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS
T ss_pred EEcCCCCEEEEEeCC-------------CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC
Confidence 999999999988743 489999986322110000 000000 000 01 2224567899999999
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC----ceEEEeeccccCceeeecCCceEEEEE
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----PEILHKLDLRYGGISWCDDSLALVYES 474 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~----~~~l~~~~~~~~~~~~spDg~~l~~~~ 474 (958)
.|+.. +..+.|.+|++ ..+.. ...+..+...+..+.|+|||+.|+...
T Consensus 219 ~l~~~-------------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 219 ALAYA-------------GHDSSVTIAYP--SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp CEEEE-------------ETTTEEC-CEE--CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred EEEEE-------------eCCCcEEEEEC--CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 88773 44567888886 23333 344555666778899999999887653
No 251
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.54 E-value=1.5e-13 Score=150.17 Aligned_cols=117 Identities=16% Similarity=0.194 Sum_probs=83.8
Q ss_pred EeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCC
Q 002164 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (958)
Q Consensus 645 ~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~ 724 (958)
...+|.+++...+- + .|.||++||.+... ..| ......|+++||.|++ .|.+
T Consensus 16 ~~~~g~~l~y~~~G--------~--g~~vvllHG~~~~~-----------~~w----~~~~~~L~~~g~~via---~Dl~ 67 (328)
T 2cjp_A 16 VAVNGLNMHLAELG--------E--GPTILFIHGFPELW-----------YSW----RHQMVYLAERGYRAVA---PDLR 67 (328)
T ss_dssp EEETTEEEEEEEEC--------S--SSEEEEECCTTCCG-----------GGG----HHHHHHHHTTTCEEEE---ECCT
T ss_pred ecCCCcEEEEEEcC--------C--CCEEEEECCCCCch-----------HHH----HHHHHHHHHCCcEEEE---ECCC
Confidence 33488888766541 1 36799999964221 111 1335567788999999 6667
Q ss_pred CCCCcccc--h----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 725 GEGDEEAN--D----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 725 G~G~~~~~--~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
|+|.+... . .......+|+.+.++.+.. +.+++.|+||||||.+++.+|.++|++++++|++++.
T Consensus 68 G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 68 GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp TSTTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCCCcCcCCcccccHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 88887543 1 1246677888887777621 2468999999999999999999999999999998754
No 252
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.54 E-value=6.7e-14 Score=154.67 Aligned_cols=180 Identities=14% Similarity=0.062 Sum_probs=118.3
Q ss_pred HHHHHHHHCCcEEEEcCCCCCCCCCCcccch---------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHH
Q 002164 703 TSVLLWLARGFAILGGPTTPIIGEGDEEAND---------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMT 773 (958)
Q Consensus 703 ~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~---------~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a 773 (958)
..+..|+++||.|++ .+.+|+|.+.... .......+|+.++++++.++ .+.++++++|||+||.++
T Consensus 84 ~~~~~l~~~g~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a 158 (354)
T 2rau_A 84 SIVLYLARNGFNVYT---IDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAA 158 (354)
T ss_dssp CHHHHHHHTTEEEEE---EECGGGGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHH
T ss_pred hHHHHHHhCCCEEEE---ecCCCCCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHH
Confidence 346678899999999 4555677664321 12366788999999999876 344699999999999999
Q ss_pred HHHHHhC-CCceeEEEEeccCCCC--CCCCCC-----------------------cc----------------c---ccc
Q 002164 774 ANLLAHA-PHLFCCGIARSGAYNR--TLTPFG-----------------------FQ----------------N---EDR 808 (958)
Q Consensus 774 ~~~a~~~-p~~~~a~v~~~~~~~~--~~~~~~-----------------------~~----------------~---~~~ 808 (958)
+.++.++ |++++++|++++.... ....+. +. . ...
T Consensus 159 ~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (354)
T 2rau_A 159 LNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSI 238 (354)
T ss_dssp HHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSH
T ss_pred HHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhH
Confidence 9999998 8999999999653211 000000 00 0 000
Q ss_pred hhhhcHHH----------------------------------HHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHH
Q 002164 809 TLWEATST----------------------------------YVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (958)
Q Consensus 809 ~~~~~~~~----------------------------------~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (958)
..|-.... +...+....+.++++|+||+||++|..+| ..+.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p---~~~~~l 315 (354)
T 2rau_A 239 SDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQI---FDSKIL 315 (354)
T ss_dssp HHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHH---BCGGGS
T ss_pred HHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCc---cchhhh
Confidence 00000000 01112234556889999999999998754 233222
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCC--CcccHHHHHHHHHHHHHHh
Q 002164 855 FNALKGHGALCRLVILPFESHGYA--ARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 855 ~~~l~~~g~~~~~~~~p~~~H~~~--~~~~~~~~~~~i~~fl~~~ 897 (958)
....+++++|++||... ..+....+.+.+.+||.++
T Consensus 316 -------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 316 -------PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp -------CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred -------ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 23469999999999863 3455678899999999875
No 253
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.54 E-value=4.5e-13 Score=151.33 Aligned_cols=297 Identities=8% Similarity=0.114 Sum_probs=175.1
Q ss_pred cccceeecCCCCeEEEEEeecc--ccCCCCCceEEEEEcCCCcee---eccCCCCccccccccceEEecCCeEEEEEecC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDA--EDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~--~~~~~~~~~l~~~~~~~g~~~---~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (958)
.+...+|||||+.++++..... .........|++|++.+++.. ....... .+..++|+|||++|+...
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~-- 86 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDS-----KFNDLDWSHNNKIIAGAL-- 86 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSS-----CEEEEEECSSSSCEEEEE--
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCC-----ceEEEEECCCCCeEEEEc--
Confidence 4677899999996666542110 000034567899999877532 2222222 277999999999998762
Q ss_pred CCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C---C--eeeecCCC-cccccc
Q 002164 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---G--TVKEIGPP-AVYTSL 337 (958)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~---g--~~~~l~~~-~~~~~~ 337 (958)
....|.++++ + + ....+... ..+..+
T Consensus 87 -----------------------------------------------~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~ 119 (416)
T 2pm9_A 87 -----------------------------------------------DNGSLELYSTNEANNAINSMARFSNHSSSVKTV 119 (416)
T ss_dssp -----------------------------------------------SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEE
T ss_pred -----------------------------------------------cCCeEEEeecccccccccchhhccCCccceEEE
Confidence 1234666666 4 2 34445444 778899
Q ss_pred ccCCC-CcEEEEEeecCCccccccCCCCCceeEEEeccCce------E-EEeccCCccccCcccccccccCcceeeeecC
Q 002164 338 DPSPD-EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF------V-RELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (958)
Q Consensus 338 ~~SpD-Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~------~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spD 409 (958)
+|+|| ++.|+..+. ++.|.+||+.++. . ..+.. .......+..+.|+||
T Consensus 120 ~~~~~~~~~l~s~~~-------------dg~v~iwd~~~~~~~~~~~~~~~~~~----------~~~~~~~v~~~~~~~~ 176 (416)
T 2pm9_A 120 KFNAKQDNVLASGGN-------------NGEIFIWDMNKCTESPSNYTPLTPGQ----------SMSSVDEVISLAWNQS 176 (416)
T ss_dssp EECSSSTTBEEEECS-------------SSCEEBCBTTTTSSCTTTCCCBCCCC----------SCCSSCCCCEEEECSS
T ss_pred EEcCCCCCEEEEEcC-------------CCeEEEEECCCCcccccccccccccc----------ccCCCCCeeEEEeCCC
Confidence 99999 677766653 3489999998654 1 11110 0112245678999999
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC-ceEEEee------ccccCceeeecCCceEEEEEeccccceE
Q 002164 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKL------DLRYGGISWCDDSLALVYESWYKTRRTR 482 (958)
Q Consensus 410 G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~------~~~~~~~~~spDg~~l~~~~~~~~~~~~ 482 (958)
+..+++. .+..+.|.+|++ ..++ ...+... ...+..+.|+|+|..+++....++....
T Consensus 177 ~~~~l~~------------~~~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 177 LAHVFAS------------AGSSNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CTTEEEE------------ESSSSCEEEEET---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCcEEEE------------EcCCCCEEEEEC---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 6555543 134567899996 3333 2333222 4557789999998655544443321123
Q ss_pred EEEEcCCCCCCCcEEEec-cCCccccCCCCCCceEecc-CCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECC
Q 002164 483 TWVISPGSKDVAPRILFD-RSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDIN 560 (958)
Q Consensus 483 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~ 560 (958)
|.++++..+. ....... .....+.. +.|+| +|++|+....+ ..|++||+.
T Consensus 242 i~~~d~~~~~-~~~~~~~~~~~~~v~~------~~~s~~~~~~l~s~~~d---------------------g~v~~wd~~ 293 (416)
T 2pm9_A 242 ILIWDLRNAN-TPLQTLNQGHQKGILS------LDWCHQDEHLLLSSGRD---------------------NTVLLWNPE 293 (416)
T ss_dssp CCEEETTSTT-SCSBCCCSCCSSCEEE------EEECSSCSSCEEEEESS---------------------SEEEEECSS
T ss_pred EEEEeCCCCC-CCcEEeecCccCceeE------EEeCCCCCCeEEEEeCC---------------------CCEEEeeCC
Confidence 5555655531 2222222 22333333 78999 88888877631 259999998
Q ss_pred CCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002164 561 TGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (958)
Q Consensus 561 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~ 620 (958)
+++.......... .-...+|+||+..++++... ...+.++++.+++
T Consensus 294 ~~~~~~~~~~~~~-----------~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 294 SAEQLSQFPARGN-----------WCFKTKFAPEAPDLFACASF---DNKIEVQTLQNLT 339 (416)
T ss_dssp SCCEEEEEECSSS-----------CCCCEEECTTCTTEEEECCS---SSEEEEEESCCCC
T ss_pred CCccceeecCCCC-----------ceEEEEECCCCCCEEEEEec---CCcEEEEEccCCC
Confidence 8876554443221 11235789998545444432 3568888887654
No 254
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.54 E-value=6e-13 Score=149.33 Aligned_cols=247 Identities=12% Similarity=-0.008 Sum_probs=150.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCC---CCceeeeccCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGK---LGQEIEIQGFP 186 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~---~~~~~~lt~~~ 186 (958)
.+..++|+| +.|+..+.+ +.|.+|++..... ......+..
T Consensus 18 ~i~~~~~~~--~~l~s~~~d---------------------------------g~i~iw~~~~~~~~~~~~~~~~~~~-- 60 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSGD---------------------------------GYLKVWDNKLLDNENPKDKSYSHFV-- 60 (397)
T ss_dssp CEEEEEECS--SEEEEEETT---------------------------------SEEEEEESBCCTTCCGGGGEEEEEC--
T ss_pred CeEEEEecC--CeEEEEcCC---------------------------------CEEEEEECCCcccccCCCcceEEec--
Confidence 466788888 677777664 4799999865110 002344443
Q ss_pred CCCcccceeecCC----C---CeEEEEEeeccccCCCCCceEEEEEcCCCc------eeeccCCCCccccccccceEEe-
Q 002164 187 DGAKLNFVTWSQD----G---KHLAFSIRIDAEDSSSSKLRVWVADVDTGK------ARPLFQSPDIYLNAIFDNFVWV- 252 (958)
Q Consensus 187 ~~~~~~~~~wSPD----G---~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~------~~~lt~~~~~~~~~~~~~~~ws- 252 (958)
+...+....|+|| | +.|+.... ...|++|++.+++ ...+.......-...+..++|+
T Consensus 61 h~~~v~~~~~~~~~~~~g~~~~~l~s~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 131 (397)
T 1sq9_A 61 HKSGLHHVDVLQAIERDAFELCLVATTSF---------SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 131 (397)
T ss_dssp CTTCEEEEEEEEEEETTTEEEEEEEEEET---------TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEEC
T ss_pred CCCcEEEEEEecccccCCccccEEEEEcC---------CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEee
Confidence 3346899999999 9 88887552 4578888887776 4445433200000127789999
Q ss_pred ---cCCeE-EEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C-----
Q 002164 253 ---NNSTL-LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D----- 322 (958)
Q Consensus 253 ---pDG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~----- 322 (958)
|||+. |+... ....|.++++ +
T Consensus 132 ~~~~~~~~~l~~~~-------------------------------------------------~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 132 SNDRLLSHRLVATD-------------------------------------------------VKGTTYIWKFHPFADES 162 (397)
T ss_dssp CC----CEEEEEEE-------------------------------------------------TTSCEEEEEEESSSSHH
T ss_pred ccCCCCceEEEEEe-------------------------------------------------CCCcEEEEeCCcccccc
Confidence 99998 77652 1123555555 4
Q ss_pred -Ce-ee-----ec-------CCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCc
Q 002164 323 -GT-VK-----EI-------GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPL 386 (958)
Q Consensus 323 -g~-~~-----~l-------~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~ 386 (958)
++ .. .+ ... ..+..++|+||| .|+.... ++.+.+||+..+.. ..+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~-------------dg~i~i~d~~~~~~~~~~~~~~~ 228 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN-------------NGTVQISELSTLRPLYNFESQHS 228 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT-------------TSEEEEEETTTTEEEEEEECCC-
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC-------------CCcEEEEECCCCceeEEEecccc
Confidence 32 22 22 112 567889999999 6666552 34899999986543 33322000
Q ss_pred cccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccC---CeEEEEeCCCCCCCCceEEEe----------
Q 002164 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPR---DIIYTQQAEPVQGEGPEILHK---------- 453 (958)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~g~~~~~l~~---------- 453 (958)
.. .....+..+.|+|||+.|+.. +.. +.|.+|++ ..+.....+..
T Consensus 229 h~-------~~~~~i~~i~~~~~~~~l~~~-------------~~d~~~g~i~i~d~--~~~~~~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 229 MI-------NNSNSIRSVKFSPQGSLLAIA-------------HDSNSFGCITLYET--EFGERIGSLSVPTHSSQASLG 286 (397)
T ss_dssp ---------CCCCCEEEEEECSSTTEEEEE-------------EEETTEEEEEEEET--TTCCEEEEECBC--------C
T ss_pred cc-------ccCCccceEEECCCCCEEEEE-------------ecCCCCceEEEEEC--CCCcccceeccCccccccccc
Confidence 00 001345789999999987763 223 57899996 23333344444
Q ss_pred ---eccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 454 ---LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 454 ---~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
....+..+.|+|||+.|+.....+ .|+++++..+
T Consensus 287 ~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~ 323 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSGETLCSAGWDG----KLRFWDVKTK 323 (397)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTS----EEEEEETTTT
T ss_pred ccccCCcEEEEEECCCCCEEEEEeCCC----eEEEEEcCCC
Confidence 556678899999999988775332 4666676664
No 255
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.54 E-value=5.6e-14 Score=150.73 Aligned_cols=209 Identities=14% Similarity=0.108 Sum_probs=132.1
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G 727 (958)
+|.+++...+-+++ .|+||++||.+.... .|. .....| ++||.|++ .+.+|+|
T Consensus 18 ~g~~l~~~~~g~~~--------~~~vl~lHG~~~~~~-----------~~~----~~~~~l-~~~~~v~~---~d~~G~G 70 (299)
T 3g9x_A 18 LGERMHYVDVGPRD--------GTPVLFLHGNPTSSY-----------LWR----NIIPHV-APSHRCIA---PDLIGMG 70 (299)
T ss_dssp TTEEEEEEEESCSS--------SCCEEEECCTTCCGG-----------GGT----TTHHHH-TTTSCEEE---ECCTTST
T ss_pred CCeEEEEEecCCCC--------CCEEEEECCCCccHH-----------HHH----HHHHHH-ccCCEEEe---eCCCCCC
Confidence 88888877764321 467999999653211 111 123345 56999999 5666777
Q ss_pred Ccccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC-CCC--
Q 002164 728 DEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-PFG-- 802 (958)
Q Consensus 728 ~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-~~~-- 802 (958)
.+.... .......+|+.++++++ +.+++.++|||+||.+++.++.++|++++++|++++....... .+.
T Consensus 71 ~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 144 (299)
T 3g9x_A 71 KSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEF 144 (299)
T ss_dssp TSCCCCCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGG
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHh------CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchH
Confidence 775432 23455666666666553 3458999999999999999999999999999999854332100 000
Q ss_pred -------cccc---------cchhh--------------hcH-----------------HHHHhc--------------C
Q 002164 803 -------FQNE---------DRTLW--------------EAT-----------------STYVEM--------------S 821 (958)
Q Consensus 803 -------~~~~---------~~~~~--------------~~~-----------------~~~~~~--------------s 821 (958)
+... ..... ... ..+... +
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3g9x_A 145 ARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEA 224 (299)
T ss_dssp GHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhh
Confidence 0000 00000 000 000000 0
Q ss_pred cccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 822 PFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 822 p~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
....+.++++|+|+++|++|..+| ++...++.+.+. .+++++++++||.+. .++...+.+.|.+++.+
T Consensus 225 ~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 225 YMNWLHQSPVPKLLFWGTPGVLIP--PAEAARLAESLP----NCKTVDIGPGLHYLQ-EDNPDLIGSEIARWLPA 292 (299)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHST----TEEEEEEEEESSCHH-HHCHHHHHHHHHHHSGG
T ss_pred hhhhcccCCCCeEEEecCCCCCCC--HHHHHHHHhhCC----CCeEEEeCCCCCcch-hcCHHHHHHHHHHHHhh
Confidence 111245678999999999999998 888888877764 378999999999863 45555665666655544
No 256
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.54 E-value=4.5e-13 Score=142.77 Aligned_cols=211 Identities=12% Similarity=0.113 Sum_probs=134.0
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++.... + + .|.||++||...... .+..+.. ....| ++||.|++ .|.+|+
T Consensus 12 ~~g~~l~y~~~---G-----~--g~~vvllHG~~~~~~-----------~~~~w~~-~~~~L-~~~~~vi~---~Dl~G~ 65 (282)
T 1iup_A 12 AAGVLTNYHDV---G-----E--GQPVILIHGSGPGVS-----------AYANWRL-TIPAL-SKFYRVIA---PDMVGF 65 (282)
T ss_dssp ETTEEEEEEEE---C-----C--SSEEEEECCCCTTCC-----------HHHHHTT-THHHH-TTTSEEEE---ECCTTS
T ss_pred ECCEEEEEEec---C-----C--CCeEEEECCCCCCcc-----------HHHHHHH-HHHhh-ccCCEEEE---ECCCCC
Confidence 37888876543 1 1 356999999421110 0001111 12234 67999999 666788
Q ss_pred CCcccch--h-hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC-CC--
Q 002164 727 GDEEAND--R-FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL-TP-- 800 (958)
Q Consensus 727 G~~~~~~--~-~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~-~~-- 800 (958)
|.+.... . ......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|++++++|++++...... ..
T Consensus 66 G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~ 139 (282)
T 1iup_A 66 GFTDRPENYNYSKDSWVDHIIGIMDAL------EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGL 139 (282)
T ss_dssp TTSCCCTTCCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHH
Confidence 8875432 1 2455666666665543 235899999999999999999999999999999987542110 00
Q ss_pred ---CCcc---------------cc---cch----hh---hcH---HHHHhc-------------CcccccCCCCCCEEEE
Q 002164 801 ---FGFQ---------------NE---DRT----LW---EAT---STYVEM-------------SPFMSANKLKKPILLV 836 (958)
Q Consensus 801 ---~~~~---------------~~---~~~----~~---~~~---~~~~~~-------------sp~~~~~~~~~P~Lii 836 (958)
+.+. .. ... .+ ..+ ..+... .....+.++++|+|++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 219 (282)
T 1iup_A 140 NAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLII 219 (282)
T ss_dssp HHHHTCCSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEE
T ss_pred HHHhcCCCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEE
Confidence 0000 00 000 00 000 001000 0113567889999999
Q ss_pred eeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 837 HGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 837 ~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
+|++|..+| +..+.++.+.+. ..+++++|++||... .+....+.+.+.+||.+
T Consensus 220 ~G~~D~~~p--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 220 HGREDQVVP--LSSSLRLGELID----RAQLHVFGRCGHWTQ-IEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp EETTCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHT
T ss_pred ecCCCCCCC--HHHHHHHHHhCC----CCeEEEECCCCCCcc-ccCHHHHHHHHHHHHhc
Confidence 999999998 888888877654 369999999999863 45677888889999876
No 257
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.53 E-value=2e-13 Score=146.27 Aligned_cols=213 Identities=14% Similarity=0.150 Sum_probs=133.3
Q ss_pred eCCC-eEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCC
Q 002164 646 RKDG-VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (958)
Q Consensus 646 ~~dg-~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~ 724 (958)
..+| .+++....- .++.|.||++||......+ ...|. .....|+++ |.|++ .|.+
T Consensus 19 ~~~g~~~l~y~~~G--------~g~~~~vvllHG~~pg~~~--------~~~w~----~~~~~L~~~-~~via---~Dl~ 74 (291)
T 2wue_A 19 DVDGPLKLHYHEAG--------VGNDQTVVLLHGGGPGAAS--------WTNFS----RNIAVLARH-FHVLA---VDQP 74 (291)
T ss_dssp ESSSEEEEEEEEEC--------TTCSSEEEEECCCCTTCCH--------HHHTT----TTHHHHTTT-SEEEE---ECCT
T ss_pred EeCCcEEEEEEecC--------CCCCCcEEEECCCCCccch--------HHHHH----HHHHHHHhc-CEEEE---ECCC
Confidence 3488 888766542 1224689999995210000 00111 123355554 99999 6667
Q ss_pred CCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCC--CC
Q 002164 725 GEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT--LT 799 (958)
Q Consensus 725 G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~--~~ 799 (958)
|+|.+.... .......+|+.+.++.+ + .+++.|+||||||.+++.+|.++|++++++|++++..... ..
T Consensus 75 G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~ 148 (291)
T 2wue_A 75 GYGHSDKRAEHGQFNRYAAMALKGLFDQL---G---LGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFA 148 (291)
T ss_dssp TSTTSCCCSCCSSHHHHHHHHHHHHHHHH---T---CCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSS
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHh---C---CCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccc
Confidence 888875532 22445566666665554 2 3589999999999999999999999999999998754211 00
Q ss_pred C--C-------Cc-----------------cccc---ch----hh---hcHHHH----H---h-cC-----cc--cccCC
Q 002164 800 P--F-------GF-----------------QNED---RT----LW---EATSTY----V---E-MS-----PF--MSANK 828 (958)
Q Consensus 800 ~--~-------~~-----------------~~~~---~~----~~---~~~~~~----~---~-~s-----p~--~~~~~ 828 (958)
. . .+ .... .. .+ ..+..+ . . .+ .. ..+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (291)
T 2wue_A 149 PDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYR 228 (291)
T ss_dssp CSSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGG
T ss_pred cccchhhHHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhh
Confidence 0 0 00 0000 00 00 001000 0 0 00 11 45667
Q ss_pred CCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 829 LKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 829 ~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
+++|+|+++|++|..+| +..++++.+.+. ..++++++++||... .+....+.+.+.+||.
T Consensus 229 i~~P~lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 288 (291)
T 2wue_A 229 LRQPVLLIWGREDRVNP--LDGALVALKTIP----RAQLHVFGQCGHWVQ-VEKFDEFNKLTIEFLG 288 (291)
T ss_dssp CCSCEEEEEETTCSSSC--GGGGHHHHHHST----TEEEEEESSCCSCHH-HHTHHHHHHHHHHHTT
T ss_pred CCCCeEEEecCCCCCCC--HHHHHHHHHHCC----CCeEEEeCCCCCChh-hhCHHHHHHHHHHHHh
Confidence 89999999999999998 888887776654 369999999999863 4556677778888874
No 258
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.53 E-value=4.3e-12 Score=143.76 Aligned_cols=252 Identities=15% Similarity=0.124 Sum_probs=159.2
Q ss_pred eceeEEEccCCCCCCceee-eccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcc
Q 002164 163 TGIGIHQLFPDGKLGQEIE-IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY 241 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~-lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~ 241 (958)
+.|+||++.+ ++... +....++..+..++|||||++||... ....|.+|++.+++..+........
T Consensus 125 ~tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs---------~Dg~v~iWd~~~~~~~~~~~~h~~~ 191 (420)
T 4gga_A 125 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---------SSAEVQLWDVQQQKRLRNMTSHSAR 191 (420)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEE---------CCCeEEEEEcCCCcEEEEEeCCCCc
Confidence 3899999865 44333 33222334789999999999998855 2567889999988765544433322
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc
Q 002164 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (958)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 321 (958)
+. +++.|++.|+... ....++.++.
T Consensus 192 ----v~--~~s~~~~~l~sgs-------------------------------------------------~d~~i~~~d~ 216 (420)
T 4gga_A 192 ----VG--SLSWNSYILSSGS-------------------------------------------------RSGHIHHHDV 216 (420)
T ss_dssp ----EE--EEEEETTEEEEEE-------------------------------------------------TTSEEEEEET
T ss_pred ----eE--EEeeCCCEEEEEe-------------------------------------------------CCCceeEeee
Confidence 33 3455677777551 1234556665
Q ss_pred -CC--eeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEE--eccCCccccCccccc
Q 002164 322 -DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE--LCDLPLAEDIPIAFN 395 (958)
Q Consensus 322 -~g--~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~--l~~~~~~~~~p~~~~ 395 (958)
.. ....+... ..+....|+|+|+.++....+ +.+.+|+...+.... +.. ..
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D-------------~~v~i~~~~~~~~~~~~~~~----------~~ 273 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQT----------FT 273 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCCSSCSCCSEE----------EC
T ss_pred cccceeeEEecccccceeeeeecCCCCeeeeeecc-------------ccceEEeeccccccceeeee----------ec
Confidence 32 23333333 567788999999999888743 478999987543211 110 01
Q ss_pred ccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEe
Q 002164 396 SVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESW 475 (958)
Q Consensus 396 ~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~ 475 (958)
.....+..+.|+|++..+++.... +..+.|.+|++ ..++..........+....|+|+++.|+.+..
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~g----------s~D~~I~iwd~---~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg 340 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHG 340 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEEC----------TTTCEEEEEET---TTTEEEEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred ccCCceeeeeeCCCcccEEEEEee----------cCCCEEEEEeC---CccccceeeccccceeeeeecCCCCeEEEEEe
Confidence 112345778999999988774221 33557899996 44443333344556677899999999998765
Q ss_pred ccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 476 YKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 476 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
...+ .|++++..++ +.......+...+.. ++|||||++|+...
T Consensus 341 ~~d~--~I~iwd~~~~--~~v~~l~gH~~~V~~------l~~spdg~~l~S~s 383 (420)
T 4gga_A 341 FAQN--QLVIWKYPTM--AKVAELKGHTSRVLS------LTMSPDGATVASAA 383 (420)
T ss_dssp TTTC--CEEEEETTTC--CEEEEECCCSSCEEE------EEECTTSSCEEEEE
T ss_pred cCCC--EEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEe
Confidence 4332 3555666653 344444444444544 78999999998776
No 259
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.53 E-value=3.5e-13 Score=144.72 Aligned_cols=215 Identities=13% Similarity=0.118 Sum_probs=132.8
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++.... + . .|.||++||........ ..|. .....|++ +|.|++ .|.+|+
T Consensus 23 ~~g~~l~y~~~---g-----~--g~~vvllHG~~~~~~~~--------~~~~----~~~~~L~~-~~~vi~---~Dl~G~ 76 (296)
T 1j1i_A 23 AGGVETRYLEA---G-----K--GQPVILIHGGGAGAESE--------GNWR----NVIPILAR-HYRVIA---MDMLGF 76 (296)
T ss_dssp ETTEEEEEEEE---C-----C--SSEEEEECCCSTTCCHH--------HHHT----TTHHHHTT-TSEEEE---ECCTTS
T ss_pred ECCEEEEEEec---C-----C--CCeEEEECCCCCCcchH--------HHHH----HHHHHHhh-cCEEEE---ECCCCC
Confidence 47888875543 1 1 35688999953110000 0011 12334544 499999 666788
Q ss_pred CCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC-----
Q 002164 727 GDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT----- 799 (958)
Q Consensus 727 G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~----- 799 (958)
|.+... ........+|+.+.++.+ + + .+++.|+||||||.+++.+|.++|++++++|++++.......
T Consensus 77 G~S~~~~~~~~~~~~~~dl~~~l~~l---~-~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 151 (296)
T 1j1i_A 77 GKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLR 151 (296)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc---C-C-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHH
Confidence 877521 112445566655555432 2 2 158999999999999999999999999999998875421100
Q ss_pred -CCCccc---------------cc-------chhhh---cH---HHHHh-----------cCcccccCCCCCCEEEEeeC
Q 002164 800 -PFGFQN---------------ED-------RTLWE---AT---STYVE-----------MSPFMSANKLKKPILLVHGE 839 (958)
Q Consensus 800 -~~~~~~---------------~~-------~~~~~---~~---~~~~~-----------~sp~~~~~~~~~P~Lii~G~ 839 (958)
.+.+.. .. ...+. .+ ..+.. ......+.++++|+|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~ 231 (296)
T 1j1i_A 152 PIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 231 (296)
T ss_dssp ----CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEET
T ss_pred HHhcccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEEC
Confidence 000000 00 00000 00 00100 01223467889999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
+|..+| +..+.++.+.+. ..++++++++||... .+....+.+.+.+||.+.+.
T Consensus 232 ~D~~~~--~~~~~~~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 284 (296)
T 1j1i_A 232 DDKVVP--VETAYKFLDLID----DSWGYIIPHCGHWAM-IEHPEDFANATLSFLSLRVD 284 (296)
T ss_dssp TCSSSC--HHHHHHHHHHCT----TEEEEEESSCCSCHH-HHSHHHHHHHHHHHHHHC--
T ss_pred CCcccC--HHHHHHHHHHCC----CCEEEEECCCCCCch-hcCHHHHHHHHHHHHhccCC
Confidence 999998 888888877654 368999999999864 45677888999999988763
No 260
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.53 E-value=3.4e-12 Score=138.15 Aligned_cols=254 Identities=15% Similarity=0.093 Sum_probs=158.0
Q ss_pred eceeEEEccCCCCCCc-eeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcc
Q 002164 163 TGIGIHQLFPDGKLGQ-EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY 241 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~-~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~ 241 (958)
+.|+||++.+ ++ .+.++...+...+...+|+|||++|+... ....|.+|++++++..+.......
T Consensus 45 ~tV~iWd~~t----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs---------~Dg~v~iw~~~~~~~~~~~~~h~~- 110 (318)
T 4ggc_A 45 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---------SSAEVQLWDVQQQKRLRNMTSHSA- 110 (318)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTTEEEEEEECCSS-
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCeEEEEEECCCCCEEEEEE---------CCCcEEEeecCCceeEEEecCccc-
Confidence 3799999865 43 33333222334688999999999998754 256889999998876554433332
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc
Q 002164 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (958)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 321 (958)
....++++++.|+... ....+...+.
T Consensus 111 -----~~~~~~~~~~~l~s~~-------------------------------------------------~~~~~~~~~~ 136 (318)
T 4ggc_A 111 -----RVGSLSWNSYILSSGS-------------------------------------------------RSGHIHHHDV 136 (318)
T ss_dssp -----CEEEEEEETTEEEEEE-------------------------------------------------TTSEEEEEET
T ss_pred -----eEEEeecCCCEEEEEe-------------------------------------------------cCCceEeeec
Confidence 2445677787777651 1122334444
Q ss_pred -CC--eeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCccccccc
Q 002164 322 -DG--TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSV 397 (958)
Q Consensus 322 -~g--~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~ 397 (958)
.+ ....+... ..+....|+++|+.|+....+ +.+.+||+..++........ ....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~--------~~~~ 195 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQT--------FTQH 195 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCBTTBSCCSEE--------ECCC
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-------------cceeEEECCCCcccccceee--------eccc
Confidence 32 22233333 566788899999999877633 48999999754321100000 0011
Q ss_pred ccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEecc
Q 002164 398 RKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYK 477 (958)
Q Consensus 398 ~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~ 477 (958)
...+..+.|+|++..++..... +....|.+|+. ..............+....|+|+++.++..+...
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~----------~~~~~i~lwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~ 262 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHGFA 262 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEEC----------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT
T ss_pred CCceEEEEecCCCCcEEEEEec----------CCCCEEEEEec---ccccccccccceeeeeeeeecccccceEEEEEcC
Confidence 1344678899999888764221 33456888885 4444444445555677789999999998876433
Q ss_pred ccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 478 TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 478 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
. ..|+++++.++ +.......+...+.. ++|||||++|+...
T Consensus 263 d--~~i~iwd~~~~--~~~~~l~gH~~~V~~------l~~spdg~~l~S~s 303 (318)
T 4ggc_A 263 Q--NQLVIWKYPTM--AKVAELKGHTSRVLS------LTMSPDGATVASAA 303 (318)
T ss_dssp T--CCEEEEETTTC--CEEEEECCCSSCEEE------EEECTTSSCEEEEE
T ss_pred C--CEEEEEECCCC--cEEEEEcCCCCCEEE------EEEcCCCCEEEEEe
Confidence 3 23556666664 344444444555554 78999999988776
No 261
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.52 E-value=5.6e-12 Score=156.27 Aligned_cols=190 Identities=8% Similarity=0.020 Sum_probs=118.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhccc--------ccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceee
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELAR--------PEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIE 181 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~ 181 (958)
.+..++|||||++||....+....++.... ....+..+.+.+ +......+.++.|.+|++.. + .....
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~-~--~~~~~ 94 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS-Q--KVLTT 94 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT-C--SEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC-C--cEEEE
Confidence 467889999999999988764333332222 223445666777 44344455557899999954 2 12233
Q ss_pred eccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccC-------CCCccccccccceEEecC
Q 002164 182 IQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQ-------SPDIYLNAIFDNFVWVNN 254 (958)
Q Consensus 182 lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~-------~~~~~~~~~~~~~~wspD 254 (958)
+. ....+....|+|||++|+... ....|.+||+++++...... .........+..++|+|+
T Consensus 95 ~~---~~~~V~~v~~sp~g~~l~sgs---------~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 95 VF---VPGKITSIDTDASLDWMLIGL---------QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp EE---CSSCEEEEECCTTCSEEEEEE---------TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred Ec---CCCCEEEEEECCCCCEEEEEc---------CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 32 224688999999999998854 35688999998876531110 000001122779999997
Q ss_pred C-eEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCC-
Q 002164 255 S-TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGP- 330 (958)
Q Consensus 255 G-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~- 330 (958)
+ ..|+... ....+ ++|+ +++.. .+..
T Consensus 163 ~~~~l~~g~-------------------------------------------------~dg~v-lWd~~~~~~~~~~~~~ 192 (902)
T 2oaj_A 163 DIGTVLISY-------------------------------------------------EYVTL-TYSLVENEIKQSFIYE 192 (902)
T ss_dssp EEEEEEEEC-------------------------------------------------SSCEE-EEETTTTEEEEEECCC
T ss_pred CCCEEEEEe-------------------------------------------------CCCcE-EEECCCCceEEEEecc
Confidence 5 5565441 12345 6666 55322 2211
Q ss_pred -----------------C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE
Q 002164 331 -----------------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV 378 (958)
Q Consensus 331 -----------------~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~ 378 (958)
. ..+..++|||||++|+..+.+ +.|.+||+.+++.
T Consensus 193 ~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D-------------g~i~lWd~~~g~~ 245 (902)
T 2oaj_A 193 LPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED-------------NSLVFWDANSGHM 245 (902)
T ss_dssp BCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT-------------CCEEEEETTTCCE
T ss_pred cCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC-------------CeEEEEECCCCcE
Confidence 1 347889999999999888743 4899999986544
No 262
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.52 E-value=6.1e-14 Score=139.97 Aligned_cols=183 Identities=13% Similarity=-0.057 Sum_probs=115.1
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (958)
.|+||++||..... . ..+.......|+++||.|+.++++ ..+ .+ ......+|+.+.++.
T Consensus 4 ~p~vv~~HG~~~~~-----------~--~~~~~~~~~~l~~~g~~v~~~d~~---~~~---~~--~~~~~~~~~~~~~~~ 62 (192)
T 1uxo_A 4 TKQVYIIHGYRASS-----------T--NHWFPWLKKRLLADGVQADILNMP---NPL---QP--RLEDWLDTLSLYQHT 62 (192)
T ss_dssp CCEEEEECCTTCCT-----------T--STTHHHHHHHHHHTTCEEEEECCS---CTT---SC--CHHHHHHHHHTTGGG
T ss_pred CCEEEEEcCCCCCc-----------c--hhHHHHHHHHHHhCCcEEEEecCC---CCC---CC--CHHHHHHHHHHHHHh
Confidence 58899999964211 1 011122233577899999997775 111 11 223444444443332
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC--ceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccC
Q 002164 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH--LFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSAN 827 (958)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~--~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 827 (958)
. .+++.++|||+||.+++.++.++|+ +++++|+++|....... +. ....+...+ .....+.
T Consensus 63 ------~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~---~~-~~~~~~~~~------~~~~~~~ 125 (192)
T 1uxo_A 63 ------L-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT---LQ-MLDEFTQGS------FDHQKII 125 (192)
T ss_dssp ------C-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT---CG-GGGGGTCSC------CCHHHHH
T ss_pred ------c-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc---ch-hhhhhhhcC------CCHHHHH
Confidence 2 4689999999999999999999998 99999999986542110 00 000000000 0012234
Q ss_pred CCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 828 KLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 828 ~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
++++|+|+++|++|..+| ++.+.++.+.+ ..+++++++++|.+.... . ..+..+.+||.+++.
T Consensus 126 ~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~-~-~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 126 ESAKHRAVIASKDDQIVP--FSFSKDLAQQI-----DAALYEVQHGGHFLEDEG-F-TSLPIVYDVLTSYFS 188 (192)
T ss_dssp HHEEEEEEEEETTCSSSC--HHHHHHHHHHT-----TCEEEEETTCTTSCGGGT-C-SCCHHHHHHHHHHHH
T ss_pred hhcCCEEEEecCCCCcCC--HHHHHHHHHhc-----CceEEEeCCCcCcccccc-c-ccHHHHHHHHHHHHH
Confidence 456899999999999998 88888888877 258899999999874221 1 112345677776664
No 263
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.52 E-value=7e-14 Score=148.13 Aligned_cols=196 Identities=12% Similarity=0.147 Sum_probs=126.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch------hhHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND------RFVEQLVACA 743 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~------~~~~~~~~D~ 743 (958)
.|.||++||...... .|.. ....|+ .+|.|++ .|.+|+|.+.... .......+|+
T Consensus 20 ~~~vvllHG~~~~~~-----------~w~~----~~~~L~-~~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl 80 (271)
T 1wom_A 20 KASIMFAPGFGCDQS-----------VWNA----VAPAFE-EDHRVIL---FDYVGSGHSDLRAYDLNRYQTLDGYAQDV 80 (271)
T ss_dssp SSEEEEECCTTCCGG-----------GGTT----TGGGGT-TTSEEEE---CCCSCCSSSCCTTCCTTGGGSHHHHHHHH
T ss_pred CCcEEEEcCCCCchh-----------hHHH----HHHHHH-hcCeEEE---ECCCCCCCCCCCcccccccccHHHHHHHH
Confidence 377999999642211 1111 122344 4799999 6667888775321 1245666777
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC--C--Ccccc-----------cc
Q 002164 744 EAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--F--GFQNE-----------DR 808 (958)
Q Consensus 744 ~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~--~--~~~~~-----------~~ 808 (958)
.+.++.+ +.+++.++||||||.+++.+|.++|++++++|++++........ + .+... ..
T Consensus 81 ~~~l~~l------~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T 1wom_A 81 LDVCEAL------DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNY 154 (271)
T ss_dssp HHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHc------CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhH
Confidence 7666543 23689999999999999999999999999999988642110000 0 00000 00
Q ss_pred hhh------------hcH---HH----HH---------------hcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHH
Q 002164 809 TLW------------EAT---ST----YV---------------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (958)
Q Consensus 809 ~~~------------~~~---~~----~~---------------~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (958)
..| ..+ +. +. ..+....+.++++|+|+++|++|..+| +..++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~--~~~~~~~ 232 (271)
T 1wom_A 155 IGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAP--ATVGKYM 232 (271)
T ss_dssp HHHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSC--HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCC--HHHHHHH
Confidence 000 000 00 00 011223457889999999999999998 7777777
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 855 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
.+.+. ..++++++++||... .+....+.+.+.+||.++
T Consensus 233 ~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 233 HQHLP----YSSLKQMEARGHCPH-MSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp HHHSS----SEEEEEEEEESSCHH-HHCHHHHHHHHHHHHHHH
T ss_pred HHHCC----CCEEEEeCCCCcCcc-ccCHHHHHHHHHHHHHhc
Confidence 66553 379999999999863 456778889999999876
No 264
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.52 E-value=1.4e-13 Score=144.30 Aligned_cols=196 Identities=14% Similarity=0.102 Sum_probs=124.7
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch-hhHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND-RFVEQLVACAEAAVE 748 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~-~~~~~~~~D~~~av~ 748 (958)
.|.||++||.+... ..| ......|+++ |.|++ .|.+|+|.+.... ..+....+|+.+.++
T Consensus 16 ~~~vvllHG~~~~~-----------~~w----~~~~~~L~~~-~~via---~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~ 76 (255)
T 3bf7_A 16 NSPIVLVHGLFGSL-----------DNL----GVLARDLVND-HNIIQ---VDVRNHGLSPREPVMNYPAMAQDLVDTLD 76 (255)
T ss_dssp CCCEEEECCTTCCT-----------TTT----HHHHHHHTTT-SCEEE---ECCTTSTTSCCCSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCcccH-----------hHH----HHHHHHHHhh-CcEEE---ecCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46789999964211 112 1234455554 99999 6667888775432 224566677777766
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCC-CCCCCCC-------------Cccccc------c
Q 002164 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY-NRTLTPF-------------GFQNED------R 808 (958)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~-~~~~~~~-------------~~~~~~------~ 808 (958)
.+ + .+++.|+||||||.+++.+|.++|++++++|++++.. ......+ ...... .
T Consensus 77 ~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T 3bf7_A 77 AL---Q---IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMR 150 (255)
T ss_dssp HH---T---CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHT
T ss_pred Hc---C---CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHh
Confidence 54 2 2589999999999999999999999999999875321 1000000 000000 0
Q ss_pred hh------------------hh-cHHH----HHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcE
Q 002164 809 TL------------------WE-ATST----YVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALC 865 (958)
Q Consensus 809 ~~------------------~~-~~~~----~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 865 (958)
.. |. .... +........+.++++|+|+++|++|..++ +..++++.+.+. ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~----~~ 224 (255)
T 3bf7_A 151 QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS--EQYRDDLLAQFP----QA 224 (255)
T ss_dssp TTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTC--GGGHHHHHHHCT----TE
T ss_pred hhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCC--HHHHHHHHHHCC----CC
Confidence 00 00 0000 00000001245789999999999999998 787777766543 37
Q ss_pred EEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 866 RLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 866 ~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
+++++|++||.+. .+....+.+.+.+||.+|
T Consensus 225 ~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 225 RAHVIAGAGHWVH-AEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp EECCBTTCCSCHH-HHCHHHHHHHHHHHHHTC
T ss_pred eEEEeCCCCCccc-cCCHHHHHHHHHHHHhcC
Confidence 9999999999874 455678888899998754
No 265
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.52 E-value=2.3e-12 Score=140.06 Aligned_cols=284 Identities=8% Similarity=0.053 Sum_probs=168.7
Q ss_pred CcccceeecCCC-CeEEEEEeeccccCCCCCceEEEEEcCCCc-----e-eeccCCCCccccccccceEEecCCeEEEEE
Q 002164 189 AKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGK-----A-RPLFQSPDIYLNAIFDNFVWVNNSTLLVCT 261 (958)
Q Consensus 189 ~~~~~~~wSPDG-~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~-----~-~~lt~~~~~~~~~~~~~~~wspDG~~l~~~ 261 (958)
..+...+|+|++ +.|+... ....|.+|++.+.. . +.+..+.. .+..++|+|||++|+..
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s---------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSAS---------RDKTLISWKLTGDDQKFGVPVRSFKGHSH-----IVQDCTLTADGAYALSA 83 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEE---------TTSEEEEEEEEEETTEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEE
T ss_pred ceEEEEEccCCCccEEEEec---------CCccEEEecCCCCCccccccceEEeCCcc-----cEEEEEECCCCCEEEEE
Confidence 568889999977 4555533 24466666655422 1 12222222 26789999999999876
Q ss_pred ecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccc
Q 002164 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLD 338 (958)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~ 338 (958)
. ....|.++|+ +|+. +.+... ..+..++
T Consensus 84 s-------------------------------------------------~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~ 114 (319)
T 3frx_A 84 S-------------------------------------------------WDKTLRLWDVATGETYQRFVGHKSDVMSVD 114 (319)
T ss_dssp E-------------------------------------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred e-------------------------------------------------CCCEEEEEECCCCCeeEEEccCCCcEEEEE
Confidence 2 2345778888 7754 344444 6788999
Q ss_pred cCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCC------C
Q 002164 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP------S 412 (958)
Q Consensus 339 ~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~------~ 412 (958)
|+|||+.|+..+.+ +.+.+||+++.....+..+. ..+..+.|+|+++ .
T Consensus 115 ~~~~~~~l~s~s~D-------------~~i~vwd~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 115 IDKKASMIISGSRD-------------KTIKVWTIKGQCLATLLGHN-------------DWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp ECTTSCEEEEEETT-------------SCEEEEETTSCEEEEECCCS-------------SCEEEEEECCC------CCE
T ss_pred EcCCCCEEEEEeCC-------------CeEEEEECCCCeEEEEeccC-------------CcEEEEEEccCCCCCCCccE
Confidence 99999999887743 48999999877665554322 3345678888543 3
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCC
Q 002164 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKD 492 (958)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~ 492 (958)
++. .+..+.|.+|++ ..+.....+..+...+..++|+|||+.|+..+.++ .|.++++.++
T Consensus 169 l~s-------------~~~d~~i~~wd~--~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg----~i~iwd~~~~- 228 (319)
T 3frx_A 169 IIS-------------AGNDKMVKAWNL--NQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG----EIMLWNLAAK- 228 (319)
T ss_dssp EEE-------------EETTSCEEEEET--TTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC----EEEEEETTTT-
T ss_pred EEE-------------EeCCCEEEEEEC--CcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEECCCC-
Confidence 332 144567889996 22222233445566778899999999988776443 3555566553
Q ss_pred CCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCc
Q 002164 493 VAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDK 572 (958)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~ 572 (958)
+....... ...+.. ++|+|||.+|+.... ..+.+|+++.+..........
T Consensus 229 -~~~~~~~~-~~~v~~------~~~sp~~~~la~~~~----------------------~~i~v~~~~~~~~~~~~~~~~ 278 (319)
T 3frx_A 229 -KAMYTLSA-QDEVFS------LAFSPNRYWLAAATA----------------------TGIKVFSLDPQYLVDDLRPEF 278 (319)
T ss_dssp -EEEEEEEC-CSCEEE------EEECSSSSEEEEEET----------------------TEEEEEEETTEEEEEEECCCC
T ss_pred -cEEEEecC-CCcEEE------EEEcCCCCEEEEEcC----------------------CCcEEEEeCcCeeeeccCccc
Confidence 22222222 122333 789999998877652 137777776654433322211
Q ss_pred ccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002164 573 EKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (958)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~ 618 (958)
..+..... ......+|+|||+.++.-... ..++++++.+
T Consensus 279 ~~~~~~~~---~~v~~~~~spdg~~l~sg~~D----g~i~vWd~~t 317 (319)
T 3frx_A 279 AGYSKAAE---PHAVSLAWSADGQTLFAGYTD----NVIRVWQVMT 317 (319)
T ss_dssp TTCCGGGC---CCEEEEEECTTSSEEEEEETT----SCEEEEEEEE
T ss_pred cccccCcC---cceeEEEECCCCCEEEEeecC----ceEEEEEEee
Confidence 00000000 000135799999987654432 3477777644
No 266
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.52 E-value=8.9e-14 Score=147.09 Aligned_cols=194 Identities=11% Similarity=0.136 Sum_probs=124.0
Q ss_pred eEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchh---hHHHHHHHHHHHH
Q 002164 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR---FVEQLVACAEAAV 747 (958)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~---~~~~~~~D~~~av 747 (958)
|.||++||.+.... .|. ..+..|++ +|.|++ .|.+|+|.+..... ......+|+.+.+
T Consensus 17 ~~vvllHG~~~~~~-----------~~~----~~~~~L~~-~~~vi~---~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l 77 (269)
T 2xmz_A 17 QVLVFLHGFLSDSR-----------TYH----NHIEKFTD-NYHVIT---IDLPGHGEDQSSMDETWNFDYITTLLDRIL 77 (269)
T ss_dssp EEEEEECCTTCCGG-----------GGT----TTHHHHHT-TSEEEE---ECCTTSTTCCCCTTSCCCHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHH-----------HHH----HHHHHHhh-cCeEEE---ecCCCCCCCCCCCCCccCHHHHHHHHHHHH
Confidence 45999999653221 121 12445655 499999 66678888765422 3455666666665
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC---------------------------
Q 002164 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP--------------------------- 800 (958)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~--------------------------- 800 (958)
+.+ +.+++.++||||||.+|+.+|.++|++++++|++++........
T Consensus 78 ~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T 2xmz_A 78 DKY------KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVND 151 (269)
T ss_dssp GGG------TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHc------CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHH
Confidence 543 33689999999999999999999999999999998754321100
Q ss_pred CC----cccc---cc----hhhh-----cHH----HHHh------cCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHH
Q 002164 801 FG----FQNE---DR----TLWE-----ATS----TYVE------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRF 854 (958)
Q Consensus 801 ~~----~~~~---~~----~~~~-----~~~----~~~~------~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (958)
+. +... .. ..+. .+. .+.. .+....+.++++|+|+++|++|..++ +... ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~-~~ 228 (269)
T 2xmz_A 152 WEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV--QIAK-KM 228 (269)
T ss_dssp HTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHH--HHHH-HH
T ss_pred HHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccC--HHHH-HH
Confidence 00 0000 00 0000 000 0000 01123466789999999999999886 5543 35
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 855 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
.+.+ ..+++++++++||... .+....+.+.+.+||.+.
T Consensus 229 ~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 229 ANLI----PNSKCKLISATGHTIH-VEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHS----TTEEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred HhhC----CCcEEEEeCCCCCChh-hcCHHHHHHHHHHHHHHh
Confidence 4443 2479999999999874 456778888999999764
No 267
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.52 E-value=3.5e-14 Score=151.23 Aligned_cols=193 Identities=13% Similarity=0.047 Sum_probs=127.6
Q ss_pred CCCCCCcEEEEEeChHHHHHHHHHHhCCCcee-EEEEeccCCCCCCCC-CCc--ccc---cchhhhcHHHHHhcCccccc
Q 002164 754 GVAHPSKIAVGGHSYGAFMTANLLAHAPHLFC-CGIARSGAYNRTLTP-FGF--QNE---DRTLWEATSTYVEMSPFMSA 826 (958)
Q Consensus 754 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~-a~v~~~~~~~~~~~~-~~~--~~~---~~~~~~~~~~~~~~sp~~~~ 826 (958)
..+|++||+|+|+|+||+||+.++..+|++|+ +++++++........ ... ... ....++........+++..+
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCChh
Confidence 45899999999999999999999999999999 887776632111100 000 000 00111111111111455555
Q ss_pred CCCC-CCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCC--cEEEEEeCCCCccCCCccc------------------HHH
Q 002164 827 NKLK-KPILLVHGEEDNNSGTLTMQSDRFFNALKGHGA--LCRLVILPFESHGYAARES------------------IMH 885 (958)
Q Consensus 827 ~~~~-~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~--~~~~~~~p~~~H~~~~~~~------------------~~~ 885 (958)
.+++ .|+||+||++|.+|| +.++++++++|+..+. +++++.+++++|.+..... ..+
T Consensus 86 ~~l~~~Pvli~HG~~D~vVP--~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d 163 (318)
T 2d81_A 86 ANLGQRKIYMWTGSSDTTVG--PNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD 163 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSC--HHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred HcCCCCcEEEEeCCCCCCcC--HHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCCh
Confidence 5554 599999999999999 9999999999998873 7999999999998632221 245
Q ss_pred HHHHHHHHHHHhhccCCC-CCCcc---cccC-cccccCCCCCCCccEEEecCCCCc-cc-cceeeeecccccc
Q 002164 886 VLWETDRWLQKYCVSNTA-DRSTD---LKVS-KDDESKGAPHLQNKTVAASGGGGT-EA-DFEHDGCHLAPRS 951 (958)
Q Consensus 886 ~~~~i~~fl~~~l~~~~~-~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 951 (958)
...+|++||...+..... ..+.. ++|. .+ ..........++++.++.. .. |..|+.+|=|.-+
T Consensus 164 ~~~~i~~ff~g~~~~~~~~~~~~~~~~~~q~~~f---~~~~~~~~~~~yvP~~~~~~~~~~~l~v~lHGc~~~ 233 (318)
T 2d81_A 164 GAGAALKWIYGSLNARNTGTLSGSVLSFAQSGSY---GANGMDTTGYLYVPQSCASGATVCSLHVALHGCLQS 233 (318)
T ss_dssp HHHHHHHHHHSSCCCCCCSSCSSEEEEEECCGGG---CCTTBCSEEEEEECHHHHSSSSCEEEEEEECCTTCS
T ss_pred HHHHHHHHHhccCCCCccccccccccccccccCc---CCCCCCcceEEEecCCCCCCCCCCCEEEEecCCCCC
Confidence 678899999887653322 11111 2232 11 1123445566888888864 34 8899999988764
No 268
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=2.9e-12 Score=141.84 Aligned_cols=262 Identities=10% Similarity=0.015 Sum_probs=150.6
Q ss_pred CCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCC-
Q 002164 108 APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP- 186 (958)
Q Consensus 108 ~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~- 186 (958)
......++|||||++|++...+ .... +.+.+|++..++ +..+.+....
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~---------------------~~~~--------~~v~~~~~~~~~--g~~~~~~~~~~ 97 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEF---------------------SKDQ--------AAVSAFAFDKEK--GTLHLLNTQKT 97 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECC---------------------SSTT--------CEEEEEEEETTT--TEEEEEEEEEC
T ss_pred CCCCceEEECCCCCEEEEEEcc---------------------CCCC--------CcEEEEEEeCCC--CcEEEeeEecc
Confidence 3456788999999999887753 0000 256777775432 3334443222
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCC-CceeeccC---CCCcc------ccccccceEEecCCe
Q 002164 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKARPLFQ---SPDIY------LNAIFDNFVWVNNST 256 (958)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~-g~~~~lt~---~~~~~------~~~~~~~~~wspDG~ 256 (958)
.+......++ ||++|+++.. ....|.+++++. +....+.. ..... ....+..++|+|||+
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~--------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANY--------SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEET--------TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred CCCCcEEEEE--CCCEEEEEEC--------CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 2223444555 8998877542 245677788763 33322211 01000 001134689999999
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc---CC----e-e---
Q 002164 257 LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL---DG----T-V--- 325 (958)
Q Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~---~g----~-~--- 325 (958)
+|+++.. ....++++++ ++ + .
T Consensus 168 ~l~~~~~------------------------------------------------~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 168 YLLADDL------------------------------------------------GTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp EEEEEET------------------------------------------------TTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred EEEEEeC------------------------------------------------CCCEEEEEEEcCCCCcccccceeec
Confidence 8887610 1223445544 32 2 1
Q ss_pred ----e-ecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccC
Q 002164 326 ----K-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (958)
Q Consensus 326 ----~-~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (958)
. .+..+.....++|||||++|++.... .+.|.+|+++++..+.+....... ....+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~------------~~~v~v~~~~~g~~~~~~~~~~~~-------~~~~~ 260 (361)
T 3scy_A 200 GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI------------GGTVIAFRYADGMLDEIQTVAADT-------VNAQG 260 (361)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TCEEEEEEEETTEEEEEEEEESCS-------SCCCC
T ss_pred ccccceecCCCCCCeEEEEcCCCCEEEEEcCC------------CCeEEEEEecCCceEEeEEEecCC-------CCCCC
Confidence 1 12222456788999999999887632 348999999877655443322110 00023
Q ss_pred cceeeeecCCCCceEEEEeccCCCccccccc-CCeEEEEeCCCCCCCCceEEEee--ccccCceeeecCCceEEEEEecc
Q 002164 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTP-RDIIYTQQAEPVQGEGPEILHKL--DLRYGGISWCDDSLALVYESWYK 477 (958)
Q Consensus 401 ~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~g~~~~~l~~~--~~~~~~~~~spDg~~l~~~~~~~ 477 (958)
...+.|||||+.|++. . .. .+.+.+|++++ .+++.+.+... ......++|||||++|+++...+
T Consensus 261 ~~~i~~spdg~~l~v~-~-----------~~~~~~i~v~~~~~-~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 261 SGDIHLSPDGKYLYAS-N-----------RLKADGVAIFKVDE-TNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp EEEEEECTTSSEEEEE-E-----------CSSSCEEEEEEECT-TTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTT
T ss_pred cccEEECCCCCEEEEE-C-----------CCCCCEEEEEEEcC-CCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCC
Confidence 4589999999988763 1 12 34567766521 34454444322 23456789999999988775443
Q ss_pred ccceEEEEEcCCCC
Q 002164 478 TRRTRTWVISPGSK 491 (958)
Q Consensus 478 ~~~~~l~~~~~~~~ 491 (958)
+...+|.+++.++
T Consensus 328 -~~v~v~~~d~~~g 340 (361)
T 3scy_A 328 -NVIQIFERDQATG 340 (361)
T ss_dssp -TEEEEEEECTTTC
T ss_pred -CCEEEEEEECCCC
Confidence 3377888988775
No 269
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.51 E-value=4.2e-12 Score=138.89 Aligned_cols=283 Identities=12% Similarity=0.067 Sum_probs=170.7
Q ss_pred CCCCceecCC-CCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCC--ceeeeccCC
Q 002164 110 PLPALSFSPQ-RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLG--QEIEIQGFP 186 (958)
Q Consensus 110 ~~~~~~~SPD-G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~--~~~~lt~~~ 186 (958)
.+..++|||| |++||..+.+ +.|.||++....... ..+.+.+
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D---------------------------------~~i~vWd~~~~~~~~~~~~~~l~~-- 84 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRD---------------------------------KTIIMWKLTRDETNYGIPQRALRG-- 84 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETT---------------------------------SCEEEEEECCSSSCSEEEEEEECC--
T ss_pred CEEEEEEeCCCCCEEEEEcCC---------------------------------CeEEEEECCCCCcccceeeEEEeC--
Confidence 5678899998 5778777765 478999986422111 1233433
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCC
Q 002164 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (958)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (958)
+...+....|+|||+.|+.... ...|++++...+............ .....++++++.|+...
T Consensus 85 h~~~V~~~~~s~dg~~l~s~~~---------d~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~s~s---- 147 (340)
T 4aow_A 85 HSHFVSDVVISSDGQFALSGSW---------DGTLRLWDLTTGTTTRRFVGHTKD----VLSVAFSSDNRQIVSGS---- 147 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSSCEEEEE----
T ss_pred CCCCEEEEEECCCCCEEEEEcc---------cccceEEeecccceeeeecCCCCc----eeEEEEeecCccceeec----
Confidence 2347889999999999987552 557888888876655443333222 45677889998888662
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecC--CC-ccccccccCCC
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG--PP-AVYTSLDPSPD 342 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~--~~-~~~~~~~~SpD 342 (958)
....+.++++ ......+. .. ..+....|+++
T Consensus 148 ---------------------------------------------~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 148 ---------------------------------------------RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp ---------------------------------------------TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred ---------------------------------------------CCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 1133555666 33222221 12 55677788888
Q ss_pred CcEEEEEeecCCccccccCCCCCceeEEEeccCceEEE-eccCCccccCcccccccccCcceeeeecCCCCceEEEEecc
Q 002164 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (958)
Q Consensus 343 Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 421 (958)
+...++.+.. .++.+.+||+..+.... +..+ ...+..+.|+|||+.|+..
T Consensus 183 ~~~~~~~s~~-----------~d~~i~i~d~~~~~~~~~~~~h-------------~~~v~~~~~s~~~~~l~s~----- 233 (340)
T 4aow_A 183 SSNPIIVSCG-----------WDKLVKVWNLANCKLKTNHIGH-------------TGYLNTVTVSPDGSLCASG----- 233 (340)
T ss_dssp SSSCEEEEEE-----------TTSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTSSEEEEE-----
T ss_pred CCCcEEEEEc-----------CCCEEEEEECCCCceeeEecCC-------------CCcEEEEEECCCCCEEEEE-----
Confidence 7654333321 13479999998665433 2221 1345789999999977662
Q ss_pred CCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEec-
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD- 500 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 500 (958)
+..+.|.+|++ ...+..........+..+.|+|++..++.. ..+ .|.++++.++ .......
T Consensus 234 --------s~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~d~----~i~iwd~~~~--~~~~~~~~ 295 (340)
T 4aow_A 234 --------GKDGQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAA-TGP----SIKIWDLEGK--IIVDELKQ 295 (340)
T ss_dssp --------ETTCEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEE-ETT----EEEEEETTTT--EEEEEECC
T ss_pred --------eCCCeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeecc-CCC----EEEEEECCCC--eEEEeccc
Confidence 44567899996 333332223344456778999998765544 222 3555565553 1111111
Q ss_pred --------cCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc
Q 002164 501 --------RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (958)
Q Consensus 501 --------~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~ 563 (958)
.....+.. ++|+|||++|+....+ ..|++||+++|+
T Consensus 296 ~~~~~~~~~h~~~v~~------l~~s~dg~~l~sgs~D---------------------g~v~iW~~~tGt 339 (340)
T 4aow_A 296 EVISTSSKAEPPQCTS------LAWSADGQTLFAGYTD---------------------NLVRVWQVTIGT 339 (340)
T ss_dssp C-------CCCCCEEE------EEECTTSSEEEEEETT---------------------SCEEEEEEEC--
T ss_pred cceeeeccCCCCCEEE------EEECCCCCEEEEEeCC---------------------CEEEEEeCCCcC
Confidence 11112222 7899999998876521 259999998885
No 270
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.51 E-value=2.5e-12 Score=141.31 Aligned_cols=305 Identities=10% Similarity=-0.024 Sum_probs=163.9
Q ss_pred CceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCce-eeeccCCCCCcc
Q 002164 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQGFPDGAKL 191 (958)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~-~~lt~~~~~~~~ 191 (958)
.++++++++.++....+ +.|++|++.+ ++. +.+. .......
T Consensus 4 g~~~~~~~~~~v~~~~~---------------------------------~~v~~~d~~~----~~~~~~~~-~~~~~~~ 45 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYP---------------------------------NNLHVVDVAS----DTVYKSCV-MPDKFGP 45 (349)
T ss_dssp CCCCCTTCEEEEEEETT---------------------------------TEEEEEETTT----TEEEEEEE-CSSCCSS
T ss_pred cccccCCCEEEEEeCCC---------------------------------CeEEEEECCC----CcEEEEEe-cCCCCCC
Confidence 56788888877666543 4789999854 332 2332 2221146
Q ss_pred cceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcc--ccccccceEEecCCeEEEEEecCCCCCC
Q 002164 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIY--LNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 192 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~--~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
..++|||||++++++.. ....|+++++++++.......+... ....+..++|+|||+.|++........
T Consensus 46 ~~~~~s~dg~~~~v~~~--------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~- 116 (349)
T 1jmx_B 46 GTAMMAPDNRTAYVLNN--------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL- 116 (349)
T ss_dssp CEEEECTTSSEEEEEET--------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEEC-
T ss_pred ceeEECCCCCEEEEEeC--------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccc-
Confidence 78999999998877542 3568999999988765443322100 000145789999999999872110000
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeee----cCCCccccccccCCCCc
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE----IGPPAVYTSLDPSPDEK 344 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~----l~~~~~~~~~~~SpDGk 344 (958)
....+ .....|+++++ +|+... +.....+..++|||||+
T Consensus 117 ------------------------------~~~~~------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 117 ------------------------------NDHYV------VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp ------------------------------SSCEE------ECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred ------------------------------ccccc------cCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 00000 01356899998 754322 11224456677999999
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCccc---------ccccc----cCcceeeeecCCC
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIA---------FNSVR----KGMRSINWRSDKP 411 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~---------~~~~~----~~~~~~~~spDG~ 411 (958)
|++.. .++++||+++++.......... ..+.. ..... ..+..+.+++|++
T Consensus 161 -l~~~~---------------~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 223 (349)
T 1jmx_B 161 -LYVAG---------------PDIYKMDVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 223 (349)
T ss_dssp -EEEES---------------SSEEEECTTTCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC----
T ss_pred -EEEcc---------------CcEEEEeCCCCceecccccccc-CCccccCccceeeecCCCcceeEEeeeeeeecCCCc
Confidence 65532 2599999986654332221110 00000 00000 0111233343332
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe--eccccCceeeec-CCceEEEEEeccccceEEEEEcC
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCD-DSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~--~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
..... ......++.++. .+++.+.+.. .......+.||| ||+.|+.. . ..|+++|+
T Consensus 224 ~~~~~------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~---~~v~~~d~ 282 (349)
T 1jmx_B 224 QDPAT------------ADLLYGYLSVDL---KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---L---NRLAKYDL 282 (349)
T ss_dssp ---CC------------CEEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---E---SEEEEEET
T ss_pred CCccc------------cccceeEEEEec---cCCcEEecccccCCCcceeeEecCCCCCEEEEE---c---CeEEEEEC
Confidence 21110 011112334664 4555554432 223455689999 99988776 2 36889998
Q ss_pred CCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEe
Q 002164 489 GSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (958)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~ 568 (958)
.++ +........ ..... ++|+|||++|+.... ...|++||+++++.....
T Consensus 283 ~~~--~~~~~~~~~-~~~~~------~~~s~dg~~l~~~~~---------------------~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 283 KQR--KLIKAANLD-HTYYC------VAFDKKGDKLYLGGT---------------------FNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp TTT--EEEEEEECS-SCCCE------EEECSSSSCEEEESB---------------------SSEEEEEETTTTEEEEEE
T ss_pred ccC--eEEEEEcCC-CCccc------eEECCCCCEEEEecC---------------------CCeEEEEeccccceeeee
Confidence 874 222222211 11122 789999998877431 126999999888755443
No 271
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.51 E-value=3e-13 Score=143.30 Aligned_cols=199 Identities=9% Similarity=0.007 Sum_probs=126.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~a 746 (958)
.|.||++||.+.... .| ......|+++||.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 4 ~~~vvllHG~~~~~~-----------~w----~~~~~~L~~~g~rVia---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 65 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW-----------SW----YKLKPLLEAAGHKVTA---LDLAASGTDLRKIEELRTLYDYTLPLMEL 65 (273)
T ss_dssp CCEEEEECCTTCCGG-----------GG----TTHHHHHHHTTCEEEE---CCCTTSTTCCCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCcc-----------hH----HHHHHHHHhCCCEEEE---ecCCCCCCCccCcccccCHHHHHHHHHHH
Confidence 367899999642211 11 1245577889999999 6677888875421 1345556666555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC-CC---------------CC------cc
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL-TP---------------FG------FQ 804 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~-~~---------------~~------~~ 804 (958)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++...... .. +. +.
T Consensus 66 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
T 1xkl_A 66 MESL---SA--DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYG 140 (273)
T ss_dssp HHTS---CS--SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECS
T ss_pred HHHh---cc--CCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhcc
Confidence 4432 21 25899999999999999999999999999999876421100 00 00 00
Q ss_pred ---cccchhhhcHH---------------HHH--hcCcc----------ccc---CCCCCCEEEEeeCCCCCCCCChHHH
Q 002164 805 ---NEDRTLWEATS---------------TYV--EMSPF----------MSA---NKLKKPILLVHGEEDNNSGTLTMQS 851 (958)
Q Consensus 805 ---~~~~~~~~~~~---------------~~~--~~sp~----------~~~---~~~~~P~Lii~G~~D~~v~~~~~~~ 851 (958)
........... .+. ...+. ..+ ...++|+|+++|++|..+| +..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~ 218 (273)
T 1xkl_A 141 SPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIP--EEFQ 218 (273)
T ss_dssp CTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTT--HHHH
T ss_pred CCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCC--HHHH
Confidence 00000000000 000 00010 001 1136899999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 852 DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
+++.+.+.. .+++++|++||... .+....+.+.+.+|+.+..
T Consensus 219 ~~~~~~~p~----~~~~~i~~aGH~~~-~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 219 RWQIDNIGV----TEAIEIKGADHMAM-LCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp HHHHHHHCC----SEEEEETTCCSCHH-HHSHHHHHHHHHHHHHHCC
T ss_pred HHHHHhCCC----CeEEEeCCCCCCch-hcCHHHHHHHHHHHHHHhc
Confidence 888777753 48899999999873 5667788899999998754
No 272
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.51 E-value=3.5e-13 Score=144.77 Aligned_cols=208 Identities=10% Similarity=0.049 Sum_probs=130.9
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCc
Q 002164 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDE 729 (958)
Q Consensus 650 ~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~ 729 (958)
.+++....-|.+ ..|.||++||.+.... .|. .....|+++||.|++ .|.+|+|.+
T Consensus 33 ~~l~y~~~G~~~-------~g~~vvllHG~~~~~~-----------~w~----~~~~~L~~~g~rvia---~Dl~G~G~S 87 (297)
T 2xt0_A 33 LRMHYVDEGPRD-------AEHTFLCLHGEPSWSF-----------LYR----KMLPVFTAAGGRVVA---PDLFGFGRS 87 (297)
T ss_dssp CCEEEEEESCTT-------CSCEEEEECCTTCCGG-----------GGT----TTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEccCCC-------CCCeEEEECCCCCcce-----------eHH----HHHHHHHhCCcEEEE---eCCCCCCCC
Confidence 788776654321 0367889999653221 111 234578889999999 667788888
Q ss_pred ccch---h-hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC-CCC--
Q 002164 730 EAND---R-FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-PFG-- 802 (958)
Q Consensus 730 ~~~~---~-~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-~~~-- 802 (958)
..+. . ......+|+.+.++.+ + .+++.|+||||||.+++.+|.++|++++++|++++....... ...
T Consensus 88 ~~~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 161 (297)
T 2xt0_A 88 DKPTDDAVYTFGFHRRSLLAFLDAL---Q---LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFE 161 (297)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHH---T---CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHh---C---CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHH
Confidence 6432 1 2456677777776665 2 258999999999999999999999999999998874311100 000
Q ss_pred -c------cccc----------ch-------h----hhcH------HHHHhcC--------------cccccC-CCCCCE
Q 002164 803 -F------QNED----------RT-------L----WEAT------STYVEMS--------------PFMSAN-KLKKPI 833 (958)
Q Consensus 803 -~------~~~~----------~~-------~----~~~~------~~~~~~s--------------p~~~~~-~~~~P~ 833 (958)
+ .... .. . +... ..+.... ....+. ++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~ 241 (297)
T 2xt0_A 162 SWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPT 241 (297)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCE
T ss_pred HHHHHhhcccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCe
Confidence 0 0000 00 0 0000 0000000 011345 889999
Q ss_pred EEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 834 LLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 834 Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
|+++|++|..+| ..+.++.+.+... ....+.++++||... . ....+.+.+.+||.
T Consensus 242 Lvi~G~~D~~~~---~~~~~~~~~~p~~--~~~~~~~~~~GH~~~-~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 242 FMAVGAQDPVLG---PEVMGMLRQAIRG--CPEPMIVEAGGHFVQ-E-HGEPIARAALAAFG 296 (297)
T ss_dssp EEEEETTCSSSS---HHHHHHHHHHSTT--CCCCEEETTCCSSGG-G-GCHHHHHHHHHHTT
T ss_pred EEEEeCCCcccC---hHHHHHHHhCCCC--eeEEeccCCCCcCcc-c-CHHHHHHHHHHHHh
Confidence 999999999875 5677777766543 233334799999975 4 66778888888874
No 273
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.51 E-value=1.5e-12 Score=142.64 Aligned_cols=267 Identities=6% Similarity=-0.012 Sum_probs=169.4
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++|+....+ +.|++|++.........+.+.. ...
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d---------------------------------~~v~iw~~~~~~~~~~~~~~~~--~~~ 57 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWD---------------------------------GSLTVYKFDIQAKNVDLLQSLR--YKH 57 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETT---------------------------------SEEEEEEEETTTTEEEEEEEEE--CSS
T ss_pred cEEEEEEcCCCCEEEEEcCC---------------------------------CeEEEEEeCCCCccccceeeee--cCC
Confidence 46688999999999988765 4789999865110001333433 335
Q ss_pred cccceeecCCCC-eEEEEEeeccccCCCCCceEEEEEc-CCCceeeccC--CCCccccccccceEEecCCeEEEEEecCC
Q 002164 190 KLNFVTWSQDGK-HLAFSIRIDAEDSSSSKLRVWVADV-DTGKARPLFQ--SPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (958)
Q Consensus 190 ~~~~~~wSPDG~-~iaf~~~~~~~~~~~~~~~l~~~~~-~~g~~~~lt~--~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (958)
.+..+.|+|||+ .|+... ....|++|++ .+++...+.. .... +..++|+| ++.|+...
T Consensus 58 ~v~~~~~~~~~~~~l~~~~---------~dg~i~~wd~~~~~~~~~~~~~~~~~~-----v~~l~~~~-~~~l~s~~--- 119 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGT---------VQGEILKVDLIGSPSFQALTNNEANLG-----ICRICKYG-DDKLIAAS--- 119 (342)
T ss_dssp CEEEEEEEESSSEEEEEEE---------TTSCEEEECSSSSSSEEECBSCCCCSC-----EEEEEEET-TTEEEEEE---
T ss_pred ceEEEEECCCCCcEEEEEc---------CCCeEEEEEeccCCceEeccccCCCCc-----eEEEEeCC-CCEEEEEc---
Confidence 789999999999 888754 2568999999 8888877655 3332 77899999 88888661
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C---------Ceee-ecCCCccc
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D---------GTVK-EIGPPAVY 334 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~---------g~~~-~l~~~~~~ 334 (958)
....|.++++ + ++.. .+.....+
T Consensus 120 ----------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 153 (342)
T 1yfq_A 120 ----------------------------------------------WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKI 153 (342)
T ss_dssp ----------------------------------------------TTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCE
T ss_pred ----------------------------------------------CCCeEEEEcccccccccccccCCeeeEEeeCCce
Confidence 1234666666 4 4322 22222677
Q ss_pred cccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC-ceE--EEeccCCccccCcccccccccCcceeeeec-CC
Q 002164 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFV--RELCDLPLAEDIPIAFNSVRKGMRSINWRS-DK 410 (958)
Q Consensus 335 ~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~-~~~--~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp-DG 410 (958)
..++|+||+ |+.... ++.+.+||+.+ ... ..... . ....+..+.|+| ||
T Consensus 154 ~~~~~~~~~--l~~~~~-------------d~~i~i~d~~~~~~~~~~~~~~-~-----------~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 154 FTMDTNSSR--LIVGMN-------------NSQVQWFRLPLCEDDNGTIEES-G-----------LKYQIRDVALLPKEQ 206 (342)
T ss_dssp EEEEECSSE--EEEEES-------------TTEEEEEESSCCTTCCCEEEEC-S-----------CSSCEEEEEECSGGG
T ss_pred EEEEecCCc--EEEEeC-------------CCeEEEEECCccccccceeeec-C-----------CCCceeEEEECCCCC
Confidence 889999998 555542 34899999986 321 11111 0 113457899999 99
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEeCCCCC-----CCCceEEEeecc---------ccCceeeecCCceEEEEEec
Q 002164 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-----GEGPEILHKLDL---------RYGGISWCDDSLALVYESWY 476 (958)
Q Consensus 411 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----g~~~~~l~~~~~---------~~~~~~~spDg~~l~~~~~~ 476 (958)
+.++.. +..+.+.+|+.+. . ......+..... .+..+.|+|||+.|+.....
T Consensus 207 ~~l~~~-------------~~dg~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 272 (342)
T 1yfq_A 207 EGYACS-------------SIDGRVAVEFFDD-QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272 (342)
T ss_dssp CEEEEE-------------ETTSEEEEEECCT-TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT
T ss_pred CEEEEE-------------ecCCcEEEEEEcC-CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC
Confidence 887763 3455677777521 2 133344443322 67789999999998876543
Q ss_pred cccceEEEEEcCCCCCCCcEEEeccC-CccccCCCCCCceEeccCCceEEEEeee
Q 002164 477 KTRRTRTWVISPGSKDVAPRILFDRS-SEDVYSDPGSPMMRRTSTGTYVIAKIKK 530 (958)
Q Consensus 477 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdG~~l~~~~~~ 530 (958)
+ .|+++++.++ +........ ...+.. ++ |||++|+....+
T Consensus 273 g----~i~vwd~~~~--~~~~~~~~~h~~~v~~------~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 273 G----IISCWNLQTR--KKIKNFAKFNEDSVVK------IA--CSDNILCLATSD 313 (342)
T ss_dssp S----CEEEEETTTT--EEEEECCCCSSSEEEE------EE--ECSSEEEEEEEC
T ss_pred c----eEEEEcCccH--hHhhhhhcccCCCceE------ec--CCCCeEEEEecC
Confidence 3 3666676653 222233222 222222 33 999999888743
No 274
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.51 E-value=2.7e-13 Score=146.66 Aligned_cols=207 Identities=14% Similarity=0.055 Sum_probs=132.9
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCc
Q 002164 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDE 729 (958)
Q Consensus 650 ~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~ 729 (958)
.+++....-|.+ +.|.||++||.+.... .|. .....|+++||.|++ .|.+|+|.+
T Consensus 34 ~~l~y~~~G~~~-------~g~~vvllHG~~~~~~-----------~w~----~~~~~L~~~g~rvia---~Dl~G~G~S 88 (310)
T 1b6g_A 34 LRAHYLDEGNSD-------AEDVFLCLHGEPTWSY-----------LYR----KMIPVFAESGARVIA---PDFFGFGKS 88 (310)
T ss_dssp CEEEEEEEECTT-------CSCEEEECCCTTCCGG-----------GGT----TTHHHHHHTTCEEEE---ECCTTSTTS
T ss_pred eEEEEEEeCCCC-------CCCEEEEECCCCCchh-----------hHH----HHHHHHHhCCCeEEE---eCCCCCCCC
Confidence 888877664421 0367899999753221 111 234578889999999 667788888
Q ss_pred ccch---h-hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCC--CC------
Q 002164 730 EAND---R-FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN--RT------ 797 (958)
Q Consensus 730 ~~~~---~-~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~--~~------ 797 (958)
..+. . ......+|+.+.++.| + -+++.|+||||||.+|+.+|.++|++++++|++++... ..
T Consensus 89 ~~~~~~~~y~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~ 162 (310)
T 1b6g_A 89 DKPVDEEDYTFEFHRNFLLALIERL---D---LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFS 162 (310)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHH---T---CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHH
T ss_pred CCCCCcCCcCHHHHHHHHHHHHHHc---C---CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchh
Confidence 6532 2 2456677777777665 2 25899999999999999999999999999999886432 10
Q ss_pred ----CCCCC---c------cccc----------chhhh-cHHHHH----------------h--cC-----------ccc
Q 002164 798 ----LTPFG---F------QNED----------RTLWE-ATSTYV----------------E--MS-----------PFM 824 (958)
Q Consensus 798 ----~~~~~---~------~~~~----------~~~~~-~~~~~~----------------~--~s-----------p~~ 824 (958)
..... + .... ...-. ....|. . .. ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 1b6g_A 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAIS 242 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred hhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhh
Confidence 00000 0 0000 00000 000000 0 00 012
Q ss_pred ccC-CCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEe--CCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 825 SAN-KLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVIL--PFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 825 ~~~-~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~--p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
.+. ++++|+|+++|++|..+| ..+.++.+.+... +++++ |++||... . ....+.+.+.+||.+
T Consensus 243 ~l~~~i~~P~Lvi~G~~D~~~~---~~~~~~~~~ip~~----~~~~i~~~~~GH~~~-~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 243 FWQNDWNGQTFMAIGMKDKLLG---PDVMYPMKALING----CPEPLEIADAGHFVQ-E-FGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHTCCSEEEEEEETTCSSSS---HHHHHHHHHHSTT----CCCCEEETTCCSCGG-G-GHHHHHHHHHHHHHH
T ss_pred hhhccccCceEEEeccCcchhh---hHHHHHHHhcccc----cceeeecCCcccchh-h-ChHHHHHHHHHHHhc
Confidence 345 899999999999999874 5667777766543 44444 99999975 4 778888999999875
No 275
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.51 E-value=5.9e-14 Score=153.44 Aligned_cols=205 Identities=15% Similarity=0.117 Sum_probs=128.9
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCC
Q 002164 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGD 728 (958)
Q Consensus 649 g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~ 728 (958)
+..++...+-+. .|+||++||.+.... .+...+...||.|++ .|.+|+|.
T Consensus 69 ~~~~~~~~~g~~---------~~~vv~~hG~~~~~~------------------~~~~~~~~lg~~Vi~---~D~~G~G~ 118 (330)
T 3p2m_A 69 AGAISALRWGGS---------APRVIFLHGGGQNAH------------------TWDTVIVGLGEPALA---VDLPGHGH 118 (330)
T ss_dssp ETTEEEEEESSS---------CCSEEEECCTTCCGG------------------GGHHHHHHSCCCEEE---ECCTTSTT
T ss_pred CceEEEEEeCCC---------CCeEEEECCCCCccc------------------hHHHHHHHcCCeEEE---EcCCCCCC
Confidence 445666655321 467999999642210 112233445999999 55567777
Q ss_pred cccc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC---------
Q 002164 729 EEAN---DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR--------- 796 (958)
Q Consensus 729 ~~~~---~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~--------- 796 (958)
+... ........+|+.++++.+ +.+++.|+|||+||.+++.+|.++|++++++|++++....
T Consensus 119 S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 192 (330)
T 3p2m_A 119 SAWREDGNYSPQLNSETLAPVLREL------APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTA 192 (330)
T ss_dssp SCCCSSCBCCHHHHHHHHHHHHHHS------STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhh
Confidence 7532 122455566666666553 3468999999999999999999999999999999864210
Q ss_pred CC---C-----CCCcccccc--------hhhhcHHHHHh-----------------cC----------cccccCCCCCCE
Q 002164 797 TL---T-----PFGFQNEDR--------TLWEATSTYVE-----------------MS----------PFMSANKLKKPI 833 (958)
Q Consensus 797 ~~---~-----~~~~~~~~~--------~~~~~~~~~~~-----------------~s----------p~~~~~~~~~P~ 833 (958)
.. . ...+..... ........+.. .. ....+.++++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 272 (330)
T 3p2m_A 193 EQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPI 272 (330)
T ss_dssp C-----------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCE
T ss_pred hhhhhhhhhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCE
Confidence 00 0 000000000 00000000000 00 012345678999
Q ss_pred EEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEE-EEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 834 LLVHGEEDNNSGTLTMQSDRFFNALKGHGALCR-LVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 834 Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~-~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
|+++|++|..+| ++.++++.+.+.. .+ +++++++||.+. .+....+.+.|.+||.+
T Consensus 273 Lii~G~~D~~v~--~~~~~~l~~~~~~----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 273 TLVRGGSSGFVT--DQDTAELHRRATH----FRGVHIVEKSGHSVQ-SDQPRALIEIVRGVLDT 329 (330)
T ss_dssp EEEEETTCCSSC--HHHHHHHHHHCSS----EEEEEEETTCCSCHH-HHCHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCCCC--HHHHHHHHHhCCC----CeeEEEeCCCCCCcc-hhCHHHHHHHHHHHHhc
Confidence 999999999998 8888888776643 56 999999999873 45667777888888754
No 276
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.51 E-value=1.5e-13 Score=147.29 Aligned_cols=209 Identities=8% Similarity=-0.077 Sum_probs=133.2
Q ss_pred eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCC
Q 002164 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (958)
Q Consensus 646 ~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G 725 (958)
..+|.+++...+- +.|+||++||.+.... .|. ..+..|+ .+|.|++ .+.+|
T Consensus 14 ~~~g~~l~~~~~g----------~~~~vv~lHG~~~~~~-----------~~~----~~~~~l~-~~~~vi~---~D~~G 64 (297)
T 2qvb_A 14 EIAGKRMAYIDEG----------KGDAIVFQHGNPTSSY-----------LWR----NIMPHLE-GLGRLVA---CDLIG 64 (297)
T ss_dssp EETTEEEEEEEES----------SSSEEEEECCTTCCGG-----------GGT----TTGGGGT-TSSEEEE---ECCTT
T ss_pred EECCEEEEEEecC----------CCCeEEEECCCCchHH-----------HHH----HHHHHHh-hcCeEEE---EcCCC
Confidence 3478888766552 1478999999753221 111 1122344 4599999 55667
Q ss_pred CCCcccch------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC
Q 002164 726 EGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (958)
Q Consensus 726 ~G~~~~~~------~~~~~~~~D~~~av~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~ 798 (958)
+|.+.... .......+|+.++++.+ +. +++.++|||+||.+++.++.++|++++++|++++......
T Consensus 65 ~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 138 (297)
T 2qvb_A 65 MGASDKLSPSGPDRYSYGEQRDFLFALWDAL------DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMT 138 (297)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBC
T ss_pred CCCCCCCCCccccCcCHHHHHHHHHHHHHHc------CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCcc
Confidence 77765432 23456667777766553 33 6899999999999999999999999999999998653110
Q ss_pred C-CCC-----------cc----------------------cccc---------------hhhhcH-HHHHhc--------
Q 002164 799 T-PFG-----------FQ----------------------NEDR---------------TLWEAT-STYVEM-------- 820 (958)
Q Consensus 799 ~-~~~-----------~~----------------------~~~~---------------~~~~~~-~~~~~~-------- 820 (958)
. ... .. .... ...... ..+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (297)
T 2qvb_A 139 WADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAE 218 (297)
T ss_dssp GGGSCGGGHHHHHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHH
T ss_pred CCCCChHHHHHHHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchh
Confidence 0 000 00 0000 000000 000000
Q ss_pred ------CcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 821 ------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 821 ------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
+....+.++++|+|+++|++|..+| ++...++.+.+ .. +++++ ++||... .++...+.+.+.+||
T Consensus 219 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~~~p~~~~~~i~~fl 289 (297)
T 2qvb_A 219 VVALVNEYRSWLEETDMPKLFINAEPGAIIT--GRIRDYVRSWP----NQ-TEITV-PGVHFVQ-EDSPEEIGAAIAQFV 289 (297)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHTSS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhcccccccEEEEecCCCCcCC--HHHHHHHHHHc----CC-eEEEe-cCccchh-hhCHHHHHHHHHHHH
Confidence 1123345688999999999999998 77776665543 23 88888 9999864 566778889999999
Q ss_pred HHhh
Q 002164 895 QKYC 898 (958)
Q Consensus 895 ~~~l 898 (958)
++..
T Consensus 290 ~~~~ 293 (297)
T 2qvb_A 290 RRLR 293 (297)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 277
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.51 E-value=2.1e-13 Score=146.74 Aligned_cols=210 Identities=12% Similarity=0.065 Sum_probs=126.0
Q ss_pred eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCC
Q 002164 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (958)
Q Consensus 646 ~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G 725 (958)
..+|.+++....- + .|.||++||.+.... .| ...+..|++ ||.|++ .+.+|
T Consensus 19 ~~~g~~l~~~~~g-------~---~~~vv~lHG~~~~~~-----------~~----~~~~~~l~~-~~~v~~---~D~~G 69 (306)
T 3r40_A 19 NTSSGRIFARVGG-------D---GPPLLLLHGFPQTHV-----------MW----HRVAPKLAE-RFKVIV---ADLPG 69 (306)
T ss_dssp CCTTCCEEEEEEE-------C---SSEEEEECCTTCCGG-----------GG----GGTHHHHHT-TSEEEE---ECCTT
T ss_pred EeCCEEEEEEEcC-------C---CCeEEEECCCCCCHH-----------HH----HHHHHHhcc-CCeEEE---eCCCC
Confidence 3488888766642 1 478999999642211 11 123445666 999999 56667
Q ss_pred CCCcccchh-------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCC
Q 002164 726 EGDEEANDR-------FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTL 798 (958)
Q Consensus 726 ~G~~~~~~~-------~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~ 798 (958)
+|.+..... ......+|+.+.++.+ +.+++.++|||+||.+++.+|.++|++++++|++++......
T Consensus 70 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 143 (306)
T 3r40_A 70 YGWSDMPESDEQHTPYTKRAMAKQLIEAMEQL------GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEY 143 (306)
T ss_dssp STTSCCCCCCTTCGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHH
T ss_pred CCCCCCCCCCcccCCCCHHHHHHHHHHHHHHh------CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccc
Confidence 777754322 2455566666665543 345899999999999999999999999999999986421000
Q ss_pred -------------------CC----------------------CC----cccccch-------hhhcH-------HHHHh
Q 002164 799 -------------------TP----------------------FG----FQNEDRT-------LWEAT-------STYVE 819 (958)
Q Consensus 799 -------------------~~----------------------~~----~~~~~~~-------~~~~~-------~~~~~ 819 (958)
.. +. ....... .+..+ ..+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (306)
T 3r40_A 144 WQRMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRA 223 (306)
T ss_dssp HHHCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHh
Confidence 00 00 0000000 00000 00000
Q ss_pred c---------CcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHH
Q 002164 820 M---------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWET 890 (958)
Q Consensus 820 ~---------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i 890 (958)
. .....+.++++|+|+++|++|..++ +....+.++.+.. .++++++ ++||... .++...+.+.|
T Consensus 224 ~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~--~~~~~~~~~~~~~---~~~~~~~-~~gH~~~-~e~p~~~~~~i 296 (306)
T 3r40_A 224 GAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQS--AATPLDVWRKWAS---DVQGAPI-ESGHFLP-EEAPDQTAEAL 296 (306)
T ss_dssp HHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC--------CHHHHHHHBS---SEEEEEE-SSCSCHH-HHSHHHHHHHH
T ss_pred cccccchhhhhhhhhccCCCcceEEEEecCCcccC--chhHHHHHHhhcC---CCeEEEe-cCCcCch-hhChHHHHHHH
Confidence 0 0001357889999999999999987 5665555555432 4677777 6799863 56677788889
Q ss_pred HHHHHHh
Q 002164 891 DRWLQKY 897 (958)
Q Consensus 891 ~~fl~~~ 897 (958)
.+||.+.
T Consensus 297 ~~fl~~~ 303 (306)
T 3r40_A 297 VRFFSAA 303 (306)
T ss_dssp HHHHHC-
T ss_pred HHHHHhc
Confidence 9998764
No 278
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.50 E-value=2.4e-12 Score=153.56 Aligned_cols=297 Identities=10% Similarity=0.026 Sum_probs=179.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCC-CceeeeccCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL-GQEIEIQGFPDG 188 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~-~~~~~lt~~~~~ 188 (958)
.+..++|||||++||+.... .+.+|++.+.... ...+.+.+ +.
T Consensus 20 ~v~~~~~spdg~~l~~~~~~----------------------------------~v~v~~~~~~~~~~~~~~~~~~--h~ 63 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCGK----------------------------------SAFVRCLDDGDSKVPPVVQFTG--HG 63 (615)
T ss_dssp CCCCCEEETTTTEEEEEETT----------------------------------EEEEEECCSSCCSSCSEEEECT--TT
T ss_pred ceeEEEECCCCCEEEEecCC----------------------------------eEEEEECCCCCCccccceEEec--CC
Confidence 57789999999999998853 7899998641100 13444543 33
Q ss_pred Cc-ccceeecC--CCCeEEEEEeeccccCCCCCceEEEEEcCCC------ceeec--cCCCCccccccccceEEecCCeE
Q 002164 189 AK-LNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTG------KARPL--FQSPDIYLNAIFDNFVWVNNSTL 257 (958)
Q Consensus 189 ~~-~~~~~wSP--DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g------~~~~l--t~~~~~~~~~~~~~~~wspDG~~ 257 (958)
.. +...+||| ||++|+.... ...|.+|++.++ +...+ ...... .+..++|+|||+.
T Consensus 64 ~~~v~~~~~sp~~~~~~l~s~~~---------dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~ 130 (615)
T 1pgu_A 64 SSVVTTVKFSPIKGSQYLCSGDE---------SGKVIVWGWTFDKESNSVEVNVKSEFQVLAG----PISDISWDFEGRR 130 (615)
T ss_dssp TSCEEEEEECSSTTCCEEEEEET---------TSEEEEEEEEEEGGGTEEEEEEEEEEECCSS----CEEEEEECTTSSE
T ss_pred CceEEEEEECcCCCCCEEEEecC---------CCEEEEEeCCCCcccccccccccchhhcccc----cEEEEEEeCCCCE
Confidence 46 89999999 9999998652 456777787654 22222 111122 2778999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCCC-ccccc
Q 002164 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTS 336 (958)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~ 336 (958)
|++...+.. ....|++++.......+... ..+..
T Consensus 131 l~~~~~~~~---------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 131 LCVVGEGRD---------------------------------------------NFGVFISWDSGNSLGEVSGHSQRINA 165 (615)
T ss_dssp EEEEECCSS---------------------------------------------CSEEEEETTTCCEEEECCSCSSCEEE
T ss_pred EEEeccCCC---------------------------------------------CccEEEEEECCCcceeeecCCccEEE
Confidence 997721100 12346666643344445444 67889
Q ss_pred cccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcccccccccCcceeeeecC-CCCce
Q 002164 337 LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSD-KPSTL 414 (958)
Q Consensus 337 ~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~~spD-G~~l~ 414 (958)
++|+|||+.++++... ++.+.+||+...+.. .+..+... ...+..+.|+|| |+.++
T Consensus 166 ~~~~~~~~~~l~~~~~------------d~~v~vwd~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~ 223 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGD------------DGSVVFYQGPPFKFSASDRTHHKQ----------GSFVRDVEFSPDSGEFVI 223 (615)
T ss_dssp EEECSSSSCEEEEEET------------TTEEEEEETTTBEEEEEECSSSCT----------TCCEEEEEECSTTCCEEE
T ss_pred EEECCCCCcEEEEEeC------------CCcEEEEeCCCcceeeeecccCCC----------CceEEEEEECCCCCCEEE
Confidence 9999999954444422 348999999865543 33222110 014578999999 88777
Q ss_pred EEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEE-E---eeccccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL-H---KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l-~---~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
.. +..+.|++|++ ..+.....+ . .....+..+.|+ +++.|+.....+ .|.++++..
T Consensus 224 ~~-------------~~dg~i~vwd~--~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~----~i~~wd~~~ 283 (615)
T 1pgu_A 224 TV-------------GSDRKISCFDG--KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADA----TIRVWDVTT 283 (615)
T ss_dssp EE-------------ETTCCEEEEET--TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTS----EEEEEETTT
T ss_pred EE-------------eCCCeEEEEEC--CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCC----cEEEEECCC
Confidence 63 44567899996 233333334 2 456667889999 999888775433 355566665
Q ss_pred CCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEe
Q 002164 491 KDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (958)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~ 568 (958)
+ +.............. ....+.|+ ++++++....+ ..|++||+.+++.....
T Consensus 284 ~--~~~~~~~~~~~~~~~--~~~~~~~~-~~~~l~~~~~~---------------------g~i~~~d~~~~~~~~~~ 335 (615)
T 1pgu_A 284 S--KCVQKWTLDKQQLGN--QQVGVVAT-GNGRIISLSLD---------------------GTLNFYELGHDEVLKTI 335 (615)
T ss_dssp T--EEEEEEECCTTCGGG--CEEEEEEE-ETTEEEEEETT---------------------SCEEEEETTEEEEEEEE
T ss_pred C--cEEEEEcCCCCcccC--ceeEEEeC-CCCeEEEEECC---------------------CCEEEEECCCCcEEEEE
Confidence 3 222222222100000 00014454 77777766521 25888888776554443
No 279
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.50 E-value=4.3e-12 Score=139.40 Aligned_cols=291 Identities=13% Similarity=0.066 Sum_probs=169.1
Q ss_pred Ccccceee-----cC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCc-------ee-eccCCCCccccccccceEEecC
Q 002164 189 AKLNFVTW-----SQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------AR-PLFQSPDIYLNAIFDNFVWVNN 254 (958)
Q Consensus 189 ~~~~~~~w-----SP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~-------~~-~lt~~~~~~~~~~~~~~~wspD 254 (958)
..+....| +| ||+.|+.... ...|.+|++..++ .. .+..+.. .+..++|+||
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~---------D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~-----~V~~~~~~~~ 87 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSR---------DKTVMIWKLYEEEQNGYFGIPHKALTGHNH-----FVSDLALSQE 87 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEET---------TSCEEEEEECSSCCSSBSEEEEEEECCCSS-----CEEEEEECSS
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcC---------CCEEEEEECCcCCcccccccccchhccCCC-----ceEEEEECCC
Confidence 46788888 77 9988887552 4467777765432 11 2222222 2778999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-
Q 002164 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP- 331 (958)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~- 331 (958)
+++|+... ....|.++++ +|+. ..+...
T Consensus 88 ~~~l~s~s-------------------------------------------------~D~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 88 NCFAISSS-------------------------------------------------WDKTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp TTEEEEEE-------------------------------------------------TTSEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEc-------------------------------------------------CCCcEEEEECCCCcEEEEEcCCC
Confidence 99888661 2245777888 6643 344444
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~ 411 (958)
..+..++|||||++|+..+. ++.|.+||+.+.....+.... .....+..+.|+|+++
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~-------------d~~i~~wd~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGA-------------EREIKLWNILGECKFSSAEKE----------NHSDWVSCVRYSPIMK 175 (343)
T ss_dssp SCEEEEEECSSTTEEEEEET-------------TSCEEEEESSSCEEEECCTTT----------SCSSCEEEEEECCCCC
T ss_pred CcEEEEEECCCCCEEEEEcC-------------CCEEEEEeccCCceeeeeccc----------CCCceeeeeeeccccc
Confidence 67889999999999987763 348999999865443332211 1113456788999884
Q ss_pred C----------ceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccce
Q 002164 412 S----------TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRT 481 (958)
Q Consensus 412 ~----------l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~ 481 (958)
. ++. .+..+.|.+|+. .+.....+..+...+..++|+|||++|+..+.++
T Consensus 176 ~~~~~~~~~~~l~s-------------~~~d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg---- 235 (343)
T 2xzm_R 176 SANKVQPFAPYFAS-------------VGWDGRLKVWNT---NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDK---- 235 (343)
T ss_dssp SCSCCCSSCCEEEE-------------EETTSEEEEEET---TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTC----
T ss_pred cccccCCCCCEEEE-------------EcCCCEEEEEcC---CCceeEEEcCccccceEEEECCCCCEEEEEcCCC----
Confidence 2 222 244567889984 4433344455666788899999999998776443
Q ss_pred EEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCC
Q 002164 482 RTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (958)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~ 561 (958)
.|.++++... .......... ..+.. ++|+|++++++.... ..+.+||+.+
T Consensus 236 ~v~iwd~~~~-~~~~~~~~~~-~~v~~------v~~sp~~~~la~~~d----------------------~~v~iw~~~~ 285 (343)
T 2xzm_R 236 KLLIWDILNL-TYPQREFDAG-STINQ------IAFNPKLQWVAVGTD----------------------QGVKIFNLMT 285 (343)
T ss_dssp EEEEEESSCC-SSCSEEEECS-SCEEE------EEECSSSCEEEEEES----------------------SCEEEEESSS
T ss_pred eEEEEECCCC-cccceeecCC-CcEEE------EEECCCCCEEEEECC----------------------CCEEEEEeCC
Confidence 2444454222 1122222111 11222 789999987765431 1388899877
Q ss_pred CceEEEecCCccccc--ceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002164 562 GSKERIWESDKEKYY--ETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (958)
Q Consensus 562 g~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g 619 (958)
++...+..-...... .........-...+|+|||+.++.-.. ...+.++++.+|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~----Dg~v~~w~~~~g 341 (343)
T 2xzm_R 286 QSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT----DGVIRTFSFETS 341 (343)
T ss_dssp CCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET----TSEEEEEEEEEE
T ss_pred CCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC----CceEEEEEEEcc
Confidence 654332111100000 000000000123679999987765433 245777765443
No 280
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.50 E-value=3.4e-13 Score=142.20 Aligned_cols=196 Identities=9% Similarity=-0.005 Sum_probs=123.9
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~a 746 (958)
.|.||++||.+.... .| ......|+++||.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 10 g~~vvllHG~~~~~~-----------~w----~~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 71 (264)
T 2wfl_A 10 QKHFVLVHGGCLGAW-----------IW----YKLKPLLESAGHKVTA---VDLSAAGINPRRLDEIHTFRDYSEPLMEV 71 (264)
T ss_dssp CCEEEEECCTTCCGG-----------GG----TTHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCccccc-----------hH----HHHHHHHHhCCCEEEE---eecCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 577999999642211 11 1245577889999999 6667888875421 2345666676666
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC-CCCCC----------C---ccc-------
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR-TLTPF----------G---FQN------- 805 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~-~~~~~----------~---~~~------- 805 (958)
++.+ +. .+++.|+||||||.+++.++.++|++++++|++++.... ..... . +..
T Consensus 72 l~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (264)
T 2wfl_A 72 MASI---PP--DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYG 146 (264)
T ss_dssp HHHS---CT--TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEES
T ss_pred HHHh---CC--CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhcc
Confidence 6553 21 258999999999999999999999999999998764211 00000 0 000
Q ss_pred ---c------cc-hh-----hh--cHH--HHH--hcCcc----------ccc--C-CCCCCEEEEeeCCCCCCCCChHHH
Q 002164 806 ---E------DR-TL-----WE--ATS--TYV--EMSPF----------MSA--N-KLKKPILLVHGEEDNNSGTLTMQS 851 (958)
Q Consensus 806 ---~------~~-~~-----~~--~~~--~~~--~~sp~----------~~~--~-~~~~P~Lii~G~~D~~v~~~~~~~ 851 (958)
. .. .. +. ..+ .+. ...+. ... . ..++|+|+++|++|..+| +..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~ 224 (264)
T 2wfl_A 147 NPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFP--VEFQ 224 (264)
T ss_dssp CTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSC--HHHH
T ss_pred CCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCC--HHHH
Confidence 0 00 00 00 000 000 00010 001 1 135799999999999998 8888
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 852 DRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 852 ~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
+++.+.+.. .+++++|++||... .+....+.+.+.+|+.
T Consensus 225 ~~~~~~~p~----~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 225 KWFVESVGA----DKVKEIKEADHMGM-LSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHCC----SEEEEETTCCSCHH-HHSHHHHHHHHHHHHC
T ss_pred HHHHHhCCC----ceEEEeCCCCCchh-hcCHHHHHHHHHHHhh
Confidence 888777753 48899999999873 5666777888888864
No 281
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.50 E-value=1.7e-12 Score=143.61 Aligned_cols=260 Identities=12% Similarity=0.093 Sum_probs=154.1
Q ss_pred ceeEEEccCCCCCCceeeeccCC---CCCcccceeecCC----CCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccC
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFP---DGAKLNFVTWSQD----GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQ 236 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~---~~~~~~~~~wSPD----G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~ 236 (958)
.|.+|++... ...+.+..+. ....+...+|+|| |+.|+... ....|.+|++.+++......
T Consensus 45 ~v~vw~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~---------~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 45 RVTLYECHSQ---GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG---------SRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp EEEEEEECGG---GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE---------TTCEEEEECTTTCCEEEEEE
T ss_pred EEEEEEcCCC---cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec---------CCCEEEEEEchhceEeeeec
Confidence 6889998642 2233333221 2246888999999 55677644 25689999999887655444
Q ss_pred CCCccccccccceEEec-CCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcce
Q 002164 237 SPDIYLNAIFDNFVWVN-NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQ 315 (958)
Q Consensus 237 ~~~~~~~~~~~~~~wsp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~ 315 (958)
..... +..++|+| |++.|+... ....
T Consensus 113 ~~~~~----i~~~~~~~~~~~~l~s~~-------------------------------------------------~dg~ 139 (366)
T 3k26_A 113 GHGNA----INELKFHPRDPNLLLSVS-------------------------------------------------KDHA 139 (366)
T ss_dssp SCCSC----EEEEEECSSCTTEEEEEE-------------------------------------------------TTSC
T ss_pred CCCCc----EEEEEECCCCCCEEEEEe-------------------------------------------------CCCe
Confidence 33322 77999999 888888761 2245
Q ss_pred EEEEEc-CCeeeecC----CC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEE-ecc----C
Q 002164 316 LVLVSL-DGTVKEIG----PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCD----L 384 (958)
Q Consensus 316 l~~~~~-~g~~~~l~----~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~-l~~----~ 384 (958)
|.++++ +++..... .. ..+..++|+|||+.|+....+ +.+.+||+.++.... +.. .
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~~~ 206 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------------HSLKLWRINSKRMMNAIKESYDYN 206 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESCSHHHHHHHHHHHTCC
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-------------CCEEEEECCCCccccccceeEEec
Confidence 788888 66544332 23 778899999999999887733 489999998643211 110 0
Q ss_pred CccccC---------cc--cccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC------
Q 002164 385 PLAEDI---------PI--AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG------ 447 (958)
Q Consensus 385 ~~~~~~---------p~--~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~------ 447 (958)
+..... +. ........+..+.|+ |+.++.. +..+.|.+|++ ..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-------------~~d~~i~~wd~--~~~~~~~~~~~ 269 (366)
T 3k26_A 207 PNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK-------------SCENAIVCWKP--GKMEDDIDKIK 269 (366)
T ss_dssp GGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE-------------CSSSEEEEEEE--SSTTCCGGGCC
T ss_pred CCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE-------------ecCCEEEEEeC--CCccccccccc
Confidence 000000 00 001122445677887 5544442 44567888886 12211
Q ss_pred --------ceEEEeeccccCceeeecC--CceEEEEEeccccceEEEEEcCCCCCCCc--EEEeccC--CccccCCCCCC
Q 002164 448 --------PEILHKLDLRYGGISWCDD--SLALVYESWYKTRRTRTWVISPGSKDVAP--RILFDRS--SEDVYSDPGSP 513 (958)
Q Consensus 448 --------~~~l~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~ 513 (958)
...+......+..+.|+|| |+.|+.....+ .|+++++.++.... ....... ...+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~----- 340 (366)
T 3k26_A 270 PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG----KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQ----- 340 (366)
T ss_dssp TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS----CEEEEECCSSSGGGCEEEEECCTTCCSCEEE-----
T ss_pred cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC----cEEEEECCCCCCccccceEEcccccCCceEE-----
Confidence 2222334556778999999 99888775433 25555555532111 1122222 223333
Q ss_pred ceEeccCCceEEEEe
Q 002164 514 MMRRTSTGTYVIAKI 528 (958)
Q Consensus 514 ~~~~spdG~~l~~~~ 528 (958)
+.|+|||++|+...
T Consensus 341 -~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 341 -TSFSRDSSILIAVC 354 (366)
T ss_dssp -EEECTTSSEEEEEE
T ss_pred -EEeCCCCCeEEEEe
Confidence 78999999988776
No 282
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.50 E-value=2.3e-12 Score=145.11 Aligned_cols=271 Identities=14% Similarity=0.048 Sum_probs=164.1
Q ss_pred eceeEEEccCCCCCC-ceeeeccCCCCCcccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCc-------e-e
Q 002164 163 TGIGIHQLFPDGKLG-QEIEIQGFPDGAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------A-R 232 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~-~~~~lt~~~~~~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~-------~-~ 232 (958)
+.|.+|++...+... ....+.+ +...+....|+| |++.|+... ....|.+|++.++. . .
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s---------~dg~v~vw~~~~~~~~~~~~~~~~ 125 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCG--HTAPVLDIAWCPHNDNVIASGS---------EDCTVMVWEIPDGGLVLPLREPVI 125 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCC--CSSCEEEEEECTTCTTEEEEEE---------TTSEEEEEECCTTCCSSCBCSCSE
T ss_pred CEEEEEECccCCCCCCCCceEec--CCCCEEEEEeCCCCCCEEEEEe---------CCCeEEEEEccCCCCccccCCceE
Confidence 478999985533221 1222333 334789999999 888888754 25578888888763 2 2
Q ss_pred eccCCCCccccccccceEEecCC-eEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHh
Q 002164 233 PLFQSPDIYLNAIFDNFVWVNNS-TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYY 311 (958)
Q Consensus 233 ~lt~~~~~~~~~~~~~~~wspDG-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~ 311 (958)
.+..... .+..++|+|+| ..|+...
T Consensus 126 ~~~~h~~-----~v~~~~~~p~~~~~l~s~~------------------------------------------------- 151 (402)
T 2aq5_A 126 TLEGHTK-----RVGIVAWHPTAQNVLLSAG------------------------------------------------- 151 (402)
T ss_dssp EEECCSS-----CEEEEEECSSBTTEEEEEE-------------------------------------------------
T ss_pred EecCCCC-----eEEEEEECcCCCCEEEEEc-------------------------------------------------
Confidence 2222222 27789999998 4666541
Q ss_pred hcceEEEEEc-CCeee-ec--CCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE-Ee-ccC
Q 002164 312 ATTQLVLVSL-DGTVK-EI--GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-EL-CDL 384 (958)
Q Consensus 312 ~~~~l~~~~~-~g~~~-~l--~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l-~~~ 384 (958)
....|.++++ +++.. .+ ... ..+..++|+|||+.|+..+.+ +.|.+||+..+... .+ ..+
T Consensus 152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~ 218 (402)
T 2aq5_A 152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------------KRVRVIEPRKGTVVAEKDRPH 218 (402)
T ss_dssp TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------------SEEEEEETTTTEEEEEEECSS
T ss_pred CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------------CcEEEEeCCCCceeeeeccCC
Confidence 2245778888 66543 44 233 678899999999999988733 48999999865543 33 111
Q ss_pred CccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE--eeccccCcee
Q 002164 385 PLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH--KLDLRYGGIS 462 (958)
Q Consensus 385 ~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~--~~~~~~~~~~ 462 (958)
.. ..+..+.|+|||+.++.... ....+.|.+|++ ..+.....+. .....+..+.
T Consensus 219 ~~------------~~~~~~~~~~~~~~l~~g~~----------~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 219 EG------------TRPVHAVFVSEGKILTTGFS----------RMSERQVALWDT--KHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp CS------------SSCCEEEECSTTEEEEEEEC----------TTCCEEEEEEET--TBCSSCSEEEECCCCSSCEEEE
T ss_pred CC------------CcceEEEEcCCCcEEEEecc----------CCCCceEEEEcC--ccccCCceEEeccCCCceeEEE
Confidence 10 12467899999986665210 024567899996 2333322222 2344567799
Q ss_pred eecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecc-CCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEc
Q 002164 463 WCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR-SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLN 541 (958)
Q Consensus 463 ~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~ 541 (958)
|+|||+.|+.+...++ ..++|.+. ++..-...+... ....+.. +.|+|||..++...
T Consensus 275 ~s~~~~~l~~~g~~dg-~i~i~d~~--~~~~~~~~l~~~~~~~~v~~------~~~sp~~~~~~s~~------------- 332 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDS-SIRYFEIT--SEAPFLHYLSMFSSKESQRG------MGYMPKRGLEVNKC------------- 332 (402)
T ss_dssp EETTTTEEEEEETTCS-CEEEEEEC--SSTTCEEEEEEECCSSCCSE------EEECCGGGSCGGGT-------------
T ss_pred EcCCCCEEEEEEcCCC-eEEEEEec--CCCcceEeecccccCCcccc------eEEecccccceecc-------------
Confidence 9999999887764443 25555554 431112222221 1222233 88999998765321
Q ss_pred cCCCCCCCCCCeEEEEECCCCceEEE
Q 002164 542 GNGATPEGNIPFLDLFDINTGSKERI 567 (958)
Q Consensus 542 ~~~~~~~~~~~~L~~~dl~~g~~~~l 567 (958)
..+.+|++.+++.+.+
T Consensus 333 ----------~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 333 ----------EIARFYKLHERKCEPI 348 (402)
T ss_dssp ----------EEEEEEEEETTEEEEE
T ss_pred ----------eeEEEEEcCCCcEEEE
Confidence 1477777777766554
No 283
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.50 E-value=5.7e-13 Score=142.18 Aligned_cols=216 Identities=18% Similarity=0.195 Sum_probs=131.8
Q ss_pred EEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcC
Q 002164 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (958)
Q Consensus 640 ~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~ 719 (958)
+...+...+|.+++...+-+.+ +.|.||++||.+... ..| ...+..|++ ||.|++
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~~-------~~~~vvllHG~~~~~-----------~~~----~~~~~~L~~-~~~vi~-- 60 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGDI-------SRPPVLCLPGLTRNA-----------RDF----EDLATRLAG-DWRVLC-- 60 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBCT-------TSCCEEEECCTTCCG-----------GGG----HHHHHHHBB-TBCEEE--
T ss_pred ccCeeecCCCceEEEEEcCCCC-------CCCcEEEECCCCcch-----------hhH----HHHHHHhhc-CCEEEe--
Confidence 4556777899999888775432 136688999964211 111 123444544 999999
Q ss_pred CCCCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCC
Q 002164 720 TTPIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN 795 (958)
Q Consensus 720 ~~~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~ 795 (958)
.|.+|+|.+.... .......+|+.+.++.+ ..+++.|+||||||.+|+.+|.++|++++++|+.++...
T Consensus 61 -~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 133 (285)
T 3bwx_A 61 -PEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQE------GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPE 133 (285)
T ss_dssp -ECCTTBTTSCCCSSGGGCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSS
T ss_pred -ecCCCCCCCCCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcc
Confidence 6667888875421 12456677777777665 225899999999999999999999999999998653111
Q ss_pred CC-------------CC---CC-------------CcccccchhhhcH-H-HHHh---------cCc-----cc------
Q 002164 796 RT-------------LT---PF-------------GFQNEDRTLWEAT-S-TYVE---------MSP-----FM------ 824 (958)
Q Consensus 796 ~~-------------~~---~~-------------~~~~~~~~~~~~~-~-~~~~---------~sp-----~~------ 824 (958)
.. .. .+ .+.......|... . .+.. .++ +.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (285)
T 3bwx_A 134 VSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGAT 213 (285)
T ss_dssp CCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCC
T ss_pred cCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhcc
Confidence 00 00 00 0000000001000 0 0000 000 00
Q ss_pred -------ccCCC-CCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 825 -------SANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 825 -------~~~~~-~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
.+.++ ++|+|+++|++|..++ +..+.++.+ . ...++++++++||... .+.... +..|.+||.+
T Consensus 214 ~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~~----~-~~~~~~~i~~~gH~~~-~e~p~~-~~~i~~fl~~ 284 (285)
T 3bwx_A 214 PQVDMWPLFDALATRPLLVLRGETSDILS--AQTAAKMAS----R-PGVELVTLPRIGHAPT-LDEPES-IAAIGRLLER 284 (285)
T ss_dssp CSSCCHHHHHHHTTSCEEEEEETTCSSSC--HHHHHHHHT----S-TTEEEEEETTCCSCCC-SCSHHH-HHHHHHHHTT
T ss_pred ccchhhHHHHHccCCCeEEEEeCCCCccC--HHHHHHHHh----C-CCcEEEEeCCCCccch-hhCchH-HHHHHHHHHh
Confidence 01123 7999999999999988 776655544 3 4589999999999864 333443 4678888753
No 284
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.49 E-value=3.8e-13 Score=143.93 Aligned_cols=173 Identities=16% Similarity=0.117 Sum_probs=112.2
Q ss_pred HHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 002164 706 LLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (958)
Q Consensus 706 ~~la~~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 782 (958)
..|+ ++|.|++ .|.+|+|.+.... .......+|+.+.++.+ +.+++.|+||||||.+++.+|.++|+
T Consensus 61 ~~l~-~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~GG~ia~~~a~~~p~ 130 (289)
T 1u2e_A 61 PLVE-AGYRVIL---LDCPGWGKSDSVVNSGSRSDLNARILKSVVDQL------DIAKIHLLGNSMGGHSSVAFTLKWPE 130 (289)
T ss_dssp HHHH-TTCEEEE---ECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGG
T ss_pred HHHh-cCCeEEE---EcCCCCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHCHH
Confidence 3444 4599999 6667888775432 12334455555544432 33689999999999999999999999
Q ss_pred ceeEEEEeccCCCCC--CCCCC---------------------------ccccc--ch----hh----hcHHHHH-----
Q 002164 783 LFCCGIARSGAYNRT--LTPFG---------------------------FQNED--RT----LW----EATSTYV----- 818 (958)
Q Consensus 783 ~~~a~v~~~~~~~~~--~~~~~---------------------------~~~~~--~~----~~----~~~~~~~----- 818 (958)
+++++|++++..... ..... +.... .. .+ ..+..+.
T Consensus 131 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (289)
T 1u2e_A 131 RVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKS 210 (289)
T ss_dssp GEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHH
Confidence 999999988754211 00000 00000 00 00 0011110
Q ss_pred -------hcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHH
Q 002164 819 -------EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETD 891 (958)
Q Consensus 819 -------~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~ 891 (958)
..+....+.++++|+|+++|++|..+| +..+.++.+.+.. .+++++|++||... .++...+.+.+.
T Consensus 211 ~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~----~~~~~i~~~gH~~~-~e~p~~~~~~i~ 283 (289)
T 1u2e_A 211 LEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVP--MDAGLRLLSGIAG----SELHIFRDCGHWAQ-WEHADAFNQLVL 283 (289)
T ss_dssp HHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSC--THHHHHHHHHSTT----CEEEEESSCCSCHH-HHTHHHHHHHHH
T ss_pred HHhccccccchhhHHhhcCCCeEEEeeCCCCccC--HHHHHHHHhhCCC----cEEEEeCCCCCchh-hcCHHHHHHHHH
Confidence 011223567789999999999999998 8888888777653 58899999999863 455667777788
Q ss_pred HHHH
Q 002164 892 RWLQ 895 (958)
Q Consensus 892 ~fl~ 895 (958)
+||.
T Consensus 284 ~fl~ 287 (289)
T 1u2e_A 284 NFLA 287 (289)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8874
No 285
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.49 E-value=9.9e-14 Score=149.69 Aligned_cols=222 Identities=14% Similarity=0.136 Sum_probs=138.8
Q ss_pred CcEEEEEEEeC-CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-----
Q 002164 637 LQKELIKYQRK-DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA----- 710 (958)
Q Consensus 637 ~~~~~~~~~~~-dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~----- 710 (958)
.+.+.+++.+. -|.....++|+|++|++. ..++|+|+++||... |.. .......++.
T Consensus 10 ~~v~~~~~~S~~l~~~r~~~VylP~~y~~~-~~~yPVlylldG~~~---------------f~~-~~~~~~~l~~~~~~~ 72 (331)
T 3gff_A 10 VEYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLDGEDQ---------------FDH-MASLLQFLSQGTMPQ 72 (331)
T ss_dssp -CEEEEEEEETTTTEEEEEEEECCTTGGGS-CCCEEEEEESSHHHH---------------HHH-HHHHHHHHTCSSSCS
T ss_pred ceEEEEEEEecCCCCeEEEEEEeCCCCCCC-CCCccEEEEecChhh---------------hHH-HHHHHHHHHhhhhcC
Confidence 34567777776 478899999999998753 235999999999420 100 0112233332
Q ss_pred -CCcEEEEcCCCC-------------CCCCCCc--c----cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHH
Q 002164 711 -RGFAILGGPTTP-------------IIGEGDE--E----ANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGA 770 (958)
Q Consensus 711 -~G~~vl~~~~~~-------------~~G~G~~--~----~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG 770 (958)
.+++||.++..+ ..|.... . ....+..... .+.+.++.++..+++.+ +|+|+||||
T Consensus 73 ~~~~IvV~i~~~~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~---~el~p~i~~~~~~~~~r-~i~G~S~GG 148 (331)
T 3gff_A 73 IPKVIIVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIE---KELAPSIESQLRTNGIN-VLVGHSFGG 148 (331)
T ss_dssp SCCCEEEEECCSSHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHH---HTHHHHHHHHSCEEEEE-EEEEETHHH
T ss_pred CCCEEEEEECCCCcccccCCCccccccccccccccCCCCCcHHHHHHHHH---HHHHHHHHHHCCCCCCe-EEEEECHHH
Confidence 357888744310 0011000 0 0112222222 24566666776677655 899999999
Q ss_pred HHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCC-------C
Q 002164 771 FMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDN-------N 843 (958)
Q Consensus 771 ~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~-------~ 843 (958)
++|++++.++|++|+++++.+|.+.+. ...+......+ +......+.|+++.||+.|. .
T Consensus 149 ~~al~~~~~~p~~F~~~~~~S~~~w~~---------~~~~~~~~~~~-----~~~~~~~~~~l~l~~G~~d~~~~~~~~~ 214 (331)
T 3gff_A 149 LVAMEALRTDRPLFSAYLALDTSLWFD---------SPHYLTLLEER-----VVKGDFKQKQLFMAIANNPLSPGFGVSS 214 (331)
T ss_dssp HHHHHHHHTTCSSCSEEEEESCCTTTT---------TTHHHHHHHHH-----HHHCCCSSEEEEEEECCCSEETTTEECC
T ss_pred HHHHHHHHhCchhhheeeEeCchhcCC---------hHHHHHHHHHH-----hhcccCCCCeEEEEeCCCCCCCccchHH
Confidence 999999999999999999999864211 00111111111 11111245799999999998 4
Q ss_pred CCCChHHHHHHHHHHHhC---CCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 844 SGTLTMQSDRFFNALKGH---GALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 844 v~~~~~~~~~~~~~l~~~---g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
++ ...+++++++|+.. |+++++.+||+++|.... ...+...++||-....
T Consensus 215 ~~--~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 215 YH--KDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp HH--HHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHHHGGGC
T ss_pred HH--HHHHHHHHHHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHHHhhcC
Confidence 55 67789999999986 778999999999998632 2334555666655443
No 286
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.49 E-value=2.6e-14 Score=148.68 Aligned_cols=208 Identities=12% Similarity=0.035 Sum_probs=123.1
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCC------------------CCCCccc
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII------------------GEGDEEA 731 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~------------------G~G~~~~ 731 (958)
.|.||++||..... ..|......+...|.++||.|+.++..... |+|.+..
T Consensus 5 ~~~vl~lHG~g~~~-----------~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 73 (243)
T 1ycd_A 5 IPKLLFLHGFLQNG-----------KVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRA 73 (243)
T ss_dssp CCEEEEECCTTCCH-----------HHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEE
T ss_pred CceEEEeCCCCccH-----------HHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcc
Confidence 68999999953211 111101112344566679999996664110 2222210
Q ss_pred c-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC------CceeEEEEeccCCCCCCCCCCcc
Q 002164 732 N-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP------HLFCCGIARSGAYNRTLTPFGFQ 804 (958)
Q Consensus 732 ~-~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p------~~~~a~v~~~~~~~~~~~~~~~~ 804 (958)
- .........|+.+++++|.+....+..+++|+|||+||.+|+.++.+.+ ..+++++..++........ .+.
T Consensus 74 w~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-~~~ 152 (243)
T 1ycd_A 74 WFYHSEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-EHP 152 (243)
T ss_dssp SSCCCSSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-TST
T ss_pred cccCCCCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-ccc
Confidence 0 0000012456666777766643233468999999999999999998642 2577888877754311000 000
Q ss_pred cccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCC---CcEEEEEeCCCCccCCCcc
Q 002164 805 NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHG---ALCRLVILPFESHGYAARE 881 (958)
Q Consensus 805 ~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g---~~~~~~~~p~~~H~~~~~~ 881 (958)
....+.. .+ ......+.++++|+|++||++|..|| +.+++++++.++..+ .....++++++||.+...
T Consensus 153 --~~~~~~~--~~--~~~~~~~~~~~~P~l~i~G~~D~~vp--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~- 223 (243)
T 1ycd_A 153 --GELRITE--KF--RDSFAVKPDMKTKMIFIYGASDQAVP--SVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK- 223 (243)
T ss_dssp --TCEEECG--GG--TTTTCCCTTCCCEEEEEEETTCSSSC--HHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC-
T ss_pred --cccccch--hH--HHhccCcccCCCCEEEEEeCCCCccC--HHHHHHHHHHhhhhccccccccEEEecCCCCcCCch-
Confidence 0000000 01 11223456688999999999999999 999999999998641 112344566779987533
Q ss_pred cHHHHHHHHHHHHHHhhcc
Q 002164 882 SIMHVLWETDRWLQKYCVS 900 (958)
Q Consensus 882 ~~~~~~~~i~~fl~~~l~~ 900 (958)
..+.+.+.+||++++..
T Consensus 224 --~~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 224 --KDIIRPIVEQITSSLQE 240 (243)
T ss_dssp --HHHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHHHHHhhhh
Confidence 35788999999998753
No 287
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.49 E-value=3e-13 Score=147.70 Aligned_cols=221 Identities=12% Similarity=0.084 Sum_probs=131.1
Q ss_pred EEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcC
Q 002164 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGP 719 (958)
Q Consensus 640 ~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~ 719 (958)
+.+.+.. + ..+....+-|.+ . ..|+||++||.... ...+. +....+..| ++||.|++++
T Consensus 16 ~~~~~~~-~-~~~~y~~~g~~~---~---~~~~vvllHG~~~~-----------~~~~~-~~~~l~~~L-~~g~~Vi~~D 74 (335)
T 2q0x_A 16 HLFTYYK-D-PYCKIPVFMMNM---D---ARRCVLWVGGQTES-----------LLSFD-YFTNLAEEL-QGDWAFVQVE 74 (335)
T ss_dssp EEEEEEE-E-TTEEEEEEEECT---T---SSSEEEEECCTTCC-----------TTCST-THHHHHHHH-TTTCEEEEEC
T ss_pred EEEecCC-C-CceeEEEeccCC---C---CCcEEEEECCCCcc-----------ccchh-HHHHHHHHH-HCCcEEEEEe
Confidence 3444444 3 445555554321 1 25788899995311 01111 011234444 7899999965
Q ss_pred CC-CCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHH--hCCCceeEEEEeccCCCC
Q 002164 720 TT-PIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLA--HAPHLFCCGIARSGAYNR 796 (958)
Q Consensus 720 ~~-~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~--~~p~~~~a~v~~~~~~~~ 796 (958)
.+ +.+|+|.+.. .....|+.++++++.+. .+.+++.|+||||||.+++.++. .+|++++++|+.++..+.
T Consensus 75 l~~D~~G~G~S~~-----~~~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~ 147 (335)
T 2q0x_A 75 VPSGKIGSGPQDH-----AHDAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDP 147 (335)
T ss_dssp CGGGBTTSCSCCH-----HHHHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCT
T ss_pred ccCCCCCCCCccc-----cCcHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccc
Confidence 43 5678888732 34567888888888875 34579999999999999999999 478999999999886542
Q ss_pred CCCCCCc----------------------------ccc-c-chhhhc------HHH-HH------hcCcccccCCCCCCE
Q 002164 797 TLTPFGF----------------------------QNE-D-RTLWEA------TST-YV------EMSPFMSANKLKKPI 833 (958)
Q Consensus 797 ~~~~~~~----------------------------~~~-~-~~~~~~------~~~-~~------~~sp~~~~~~~~~P~ 833 (958)
....+.. ... . ...+.. ... +. ..+....+.++++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pt 227 (335)
T 2q0x_A 148 ENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPL 227 (335)
T ss_dssp TSTTTSHHHHHHHHHHHHHHHHHTCTTCGGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCE
T ss_pred hhcccCHHHHHHHHHHHHHHhhccCccccccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCe
Confidence 2000000 000 0 000000 000 00 001123466789999
Q ss_pred EEEeeCCCCCCCCChHH-HHHHHHHHHhCCCcEE--------E-----EEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 834 LLVHGEEDNNSGTLTMQ-SDRFFNALKGHGALCR--------L-----VILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 834 Lii~G~~D~~v~~~~~~-~~~~~~~l~~~g~~~~--------~-----~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
||+||++|..+| +.. ...+.+.+...-...+ + +++|++|| +..+.+.+||.+...
T Consensus 228 Lvi~G~~D~~vp--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~~~ 296 (335)
T 2q0x_A 228 LLMLAHNVQYKP--SDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADEDE 296 (335)
T ss_dssp EEEEECCTTCCC--CHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCC--hhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhhhh
Confidence 999999999998 664 2233333333211122 5 78999999 237888999987653
No 288
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.49 E-value=3e-13 Score=145.33 Aligned_cols=211 Identities=10% Similarity=-0.014 Sum_probs=133.7
Q ss_pred EeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCC
Q 002164 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPII 724 (958)
Q Consensus 645 ~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~ 724 (958)
...+|.+++...+-+ .|+||++||.+.... .|. .....|++ +|.|++ .+.+
T Consensus 14 ~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~~~-----------~~~----~~~~~L~~-~~~vi~---~D~~ 64 (302)
T 1mj5_A 14 IEIKGRRMAYIDEGT----------GDPILFQHGNPTSSY-----------LWR----NIMPHCAG-LGRLIA---CDLI 64 (302)
T ss_dssp EEETTEEEEEEEESC----------SSEEEEECCTTCCGG-----------GGT----TTGGGGTT-SSEEEE---ECCT
T ss_pred EEECCEEEEEEEcCC----------CCEEEEECCCCCchh-----------hhH----HHHHHhcc-CCeEEE---EcCC
Confidence 344888887665421 478999999653221 111 11223444 489999 5566
Q ss_pred CCCCcccch------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCC
Q 002164 725 GEGDEEAND------RFVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT 797 (958)
Q Consensus 725 G~G~~~~~~------~~~~~~~~D~~~av~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~ 797 (958)
|+|.+.... .......+|+.++++.+ +. +++.++|||+||.+++.++.++|++++++|++++.....
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 138 (302)
T 1mj5_A 65 GMGDSDKLDPSGPERYAYAEHRDYLDALWEAL------DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPI 138 (302)
T ss_dssp TSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCB
T ss_pred CCCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCch
Confidence 777775432 23455666666666553 33 689999999999999999999999999999998865311
Q ss_pred CC-CCC--c-------ccc--------cchh----h------------------------hcHHHH----Hhc-------
Q 002164 798 LT-PFG--F-------QNE--------DRTL----W------------------------EATSTY----VEM------- 820 (958)
Q Consensus 798 ~~-~~~--~-------~~~--------~~~~----~------------------------~~~~~~----~~~------- 820 (958)
.. .+. . ... .... + .....+ ...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (302)
T 1mj5_A 139 EWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPA 218 (302)
T ss_dssp CGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSH
T ss_pred hhhhhhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccch
Confidence 00 000 0 000 0000 0 000000 000
Q ss_pred -------CcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHH
Q 002164 821 -------SPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRW 893 (958)
Q Consensus 821 -------sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~f 893 (958)
+....+.++++|+|+++|++|..+| +..++++.+.+ .. +++++ ++||.+. .++...+.+.+.+|
T Consensus 219 ~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~----~~-~~~~~-~~gH~~~-~e~p~~~~~~i~~f 289 (302)
T 1mj5_A 219 DVVAIARDYAGWLSESPIPKLFINAEPGALTT--GRMRDFCRTWP----NQ-TEITV-AGAHFIQ-EDSPDEIGAAIAAF 289 (302)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS--HHHHHHHTTCS----SE-EEEEE-EESSCGG-GTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhhhccCCCeEEEEeCCCCCCC--hHHHHHHHHhc----CC-ceEEe-cCcCccc-ccCHHHHHHHHHHH
Confidence 1123456789999999999999998 77766665443 23 88888 9999864 56678889999999
Q ss_pred HHHhhc
Q 002164 894 LQKYCV 899 (958)
Q Consensus 894 l~~~l~ 899 (958)
+.+...
T Consensus 290 l~~~~~ 295 (302)
T 1mj5_A 290 VRRLRP 295 (302)
T ss_dssp HHHHSC
T ss_pred HHhhcc
Confidence 988654
No 289
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.49 E-value=3e-12 Score=145.71 Aligned_cols=304 Identities=10% Similarity=0.065 Sum_probs=172.8
Q ss_pred CcccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEec-CCeEEEEEecCCC
Q 002164 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPLLR 266 (958)
Q Consensus 189 ~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wsp-DG~~l~~~~~~~~ 266 (958)
..+...+|+| +++.||... ....|.+||+++++...+....+ ....+..++|+| |++.|+...
T Consensus 120 ~~V~~l~~~P~~~~~lasGs---------~dg~i~lWd~~~~~~~~~~~~~g--H~~~V~~l~f~p~~~~~l~s~s---- 184 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGS---------KGGDIMLWNFGIKDKPTFIKGIG--AGGSITGLKFNPLNTNQFYASS---- 184 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEE---------TTSCEEEECSSCCSCCEEECCCS--SSCCCCEEEECSSCTTEEEEEC----
T ss_pred CCEEEEEEeCCCCCEEEEEe---------CCCEEEEEECCCCCceeEEEccC--CCCCEEEEEEeCCCCCEEEEEe----
Confidence 4688899999 455666643 35678888988776443322111 111278999998 688887651
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC----ccccccccCC
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP----AVYTSLDPSP 341 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~----~~~~~~~~Sp 341 (958)
....|.++|+ ++..+.+... ..+..++|+|
T Consensus 185 ---------------------------------------------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 185 ---------------------------------------------MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp ---------------------------------------------SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET
T ss_pred ---------------------------------------------CCCEEEEeeccCCceeEEeccCCCCccEEEEEECC
Confidence 1234666777 5544444332 3456789999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEecc
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQD 421 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~ 421 (958)
||+.|+.... ++.|.+||++++....+..+ ...+..+.|+|+++.+++..
T Consensus 220 ~~~~l~~g~~-------------dg~i~~wd~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~~~s~---- 269 (435)
T 4e54_B 220 SSRMVVTGDN-------------VGNVILLNMDGKELWNLRMH-------------KKKVTHVALNPCCDWFLATA---- 269 (435)
T ss_dssp TTTEEEEECS-------------SSBEEEEESSSCBCCCSBCC-------------SSCEEEEEECTTCSSEEEEE----
T ss_pred CCCEEEEEeC-------------CCcEeeeccCcceeEEEecc-------------cceEEeeeecCCCceEEEEe----
Confidence 9999987763 34899999987654433322 14567899999999876641
Q ss_pred CCCcccccccCCeEEEEeCCCCCCCCceEE---EeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEIL---HKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l---~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 498 (958)
+..+.|.+||+ ..+.....+ ..+...+..++|+|||++|+..+.++. |.++++..+. ....+
T Consensus 270 --------s~d~~v~iwd~--~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~----i~iwd~~~~~-~~~~~ 334 (435)
T 4e54_B 270 --------SVDQTVKIWDL--RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE----IRVYSASQWD-CPLGL 334 (435)
T ss_dssp --------ETTSBCCEEET--TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC----EEEEESSSSS-SEEEE
T ss_pred --------cCcceeeEEec--ccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE----EEEEECCCCc-cceEE
Confidence 33456778886 222222222 234556778999999999987765443 4444555432 11222
Q ss_pred eccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEe-cCCcccccc
Q 002164 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIW-ESDKEKYYE 577 (958)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~-~~~~~~~~~ 577 (958)
. ................|+|++..++...... +..+++.. .+...|++||..+|+..... .....
T Consensus 335 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~------~~~~~i~iwd~~~g~~~~~l~~~~~~---- 400 (435)
T 4e54_B 335 I-PHPHRHFQHLTPIKAAWHPRYNLIVVGRYPD---PNFKSCTP------YELRTIDVFDGNSGKMMCQLYDPESS---- 400 (435)
T ss_dssp C-CCCCCCCSSSCCCBCEECSSSSCEEEECCCC---TTSCCSST------TCCCCEEEECSSSCCEEEEECCSSCC----
T ss_pred e-cccccccccceeEEEEEcCCCCEEEEEEcCC---CCeEEEEe------cCCCEEEEEECCCCcEEEEEeCCCCC----
Confidence 1 1111100000111246889998877665321 11111111 11235899999888765443 22211
Q ss_pred eeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002164 578 TTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (958)
Q Consensus 578 ~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~ 622 (958)
.+.. -.+|+|||+.|+. .. ...|++|++.+|+.+
T Consensus 401 ~v~s------~~~fspdg~~las-g~----d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 401 GISS------LNEFNPMGDTLAS-AM----GYHILIWSQQEARTR 434 (435)
T ss_dssp CCCC------EEEECTTSSCEEE-EC----SSEEEECCCC-----
T ss_pred cEEE------EEEECCCCCEEEE-Ec----CCcEEEEECCcCeee
Confidence 0111 1258999986653 22 236899998887654
No 290
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.48 E-value=1.5e-11 Score=140.32 Aligned_cols=176 Identities=9% Similarity=0.118 Sum_probs=103.3
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc-CceEEEeccCCccccCcccccccccCcceeeeecCC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~-~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG 410 (958)
..+..++|+|||+.|+.. . ++.|.+||+. ++....+... .+..+......+..+.|+|||
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~-------------d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-D-------------DLRINLWHLEITDRSFNIVDI-----KPANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-C-------------SSEEEEEETTEEEEEEEEEEC-----CCSSGGGCCCCEEEEEECSSC
T ss_pred cceEEEEEcCCCCEEEEe-C-------------CCeEEEEECCCCCceeeeeec-----ccccccccCcceEEEEECCCC
Confidence 678899999999999875 2 2489999998 3333222110 011112223456789999999
Q ss_pred -CCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC-----ceEEEeecc------------ccCceeeecCCceEEE
Q 002164 411 -PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-----PEILHKLDL------------RYGGISWCDDSLALVY 472 (958)
Q Consensus 411 -~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-----~~~l~~~~~------------~~~~~~~spDg~~l~~ 472 (958)
+.++.. +..+.|.+||+ ..++ ...+..... .+..+.|+|||+.|+.
T Consensus 239 ~~~l~s~-------------~~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 239 CNTFVYS-------------SSKGTIRLCDM---RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp TTEEEEE-------------ETTSCEEEEET---TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred CcEEEEE-------------eCCCeEEEEEC---cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE
Confidence 555542 34567899996 3333 344443332 6778999999999987
Q ss_pred EEeccccceEEEEEcCCCCCCCcEEEeccCCcccc------CCC---CCCceEeccCCceEEEEeeeccCCCcEEEEccC
Q 002164 473 ESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVY------SDP---GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGN 543 (958)
Q Consensus 473 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~ 543 (958)
... + .|.++++... ......+........ ... ....++|+|||++|+....
T Consensus 303 ~~~-~----~v~iwd~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~-------------- 362 (447)
T 3dw8_B 303 RDY-L----SVKVWDLNME-NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSY-------------- 362 (447)
T ss_dssp EES-S----EEEEEETTCC-SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECS--------------
T ss_pred eeC-C----eEEEEeCCCC-ccccceeeccccccccccccccccccccceEEEECCCCCEEEEecc--------------
Confidence 654 2 2444454431 112222222111000 000 0011689999999876652
Q ss_pred CCCCCCCCCeEEEEECCCCceEEEec
Q 002164 544 GATPEGNIPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 544 ~~~~~~~~~~L~~~dl~~g~~~~l~~ 569 (958)
...|++||+.+++...+..
T Consensus 363 -------dg~v~iwd~~~~~~~~~~~ 381 (447)
T 3dw8_B 363 -------NNFFRMFDRNTKRDITLEA 381 (447)
T ss_dssp -------TTEEEEEETTTCCEEEEEC
T ss_pred -------CCEEEEEEcCCCcceeeee
Confidence 1269999999988766543
No 291
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.48 E-value=1.6e-13 Score=144.02 Aligned_cols=190 Identities=10% Similarity=0.016 Sum_probs=116.3
Q ss_pred EEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHH
Q 002164 672 CLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVV 751 (958)
Q Consensus 672 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~ 751 (958)
.||++||.+.... .|. .....| +.+|.|++ .|.+|+|.+.....+ ++.+.++.+.
T Consensus 15 ~vvllHG~~~~~~-----------~w~----~~~~~L-~~~~~vi~---~Dl~G~G~S~~~~~~------~~~~~~~~l~ 69 (258)
T 1m33_A 15 HLVLLHGWGLNAE-----------VWR----CIDEEL-SSHFTLHL---VDLPGFGRSRGFGAL------SLADMAEAVL 69 (258)
T ss_dssp EEEEECCTTCCGG-----------GGG----GTHHHH-HTTSEEEE---ECCTTSTTCCSCCCC------CHHHHHHHHH
T ss_pred eEEEECCCCCChH-----------HHH----HHHHHh-hcCcEEEE---eeCCCCCCCCCCCCc------CHHHHHHHHH
Confidence 7889999642211 111 123345 46899999 666788887544211 1112233343
Q ss_pred HcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC-CCC-cccc--------c--------chhh--
Q 002164 752 RRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT-PFG-FQNE--------D--------RTLW-- 811 (958)
Q Consensus 752 ~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~-~~~-~~~~--------~--------~~~~-- 811 (958)
+. ++ +++.|+||||||.+|+.+|.++|++++++|++++....... .+. .... . ....
T Consensus 70 ~~--l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (258)
T 1m33_A 70 QQ--AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLAL 146 (258)
T ss_dssp TT--SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HH--hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33 34 78999999999999999999999999999998764211100 000 0000 0 0000
Q ss_pred ---------hcHH----------------------HHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHh
Q 002164 812 ---------EATS----------------------TYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKG 860 (958)
Q Consensus 812 ---------~~~~----------------------~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~ 860 (958)
...+ .+...+....+.++++|+|+++|++|..+| +..++++.+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~- 223 (258)
T 1m33_A 147 QTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKLWP- 223 (258)
T ss_dssp TSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSC--GGGCC-CTTTCT-
T ss_pred HhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCC--HHHHHHHHHhCc-
Confidence 0000 001112223456789999999999999998 776665554432
Q ss_pred CCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 861 HGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 861 ~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
..+++++|++||... .+....+.+.+.+|+.+
T Consensus 224 ---~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 224 ---HSESYIFAKAAHAPF-ISHPAEFCHLLVALKQR 255 (258)
T ss_dssp ---TCEEEEETTCCSCHH-HHSHHHHHHHHHHHHTT
T ss_pred ---cceEEEeCCCCCCcc-ccCHHHHHHHHHHHHHh
Confidence 358899999999864 45567788888888854
No 292
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.48 E-value=1.3e-12 Score=137.91 Aligned_cols=213 Identities=13% Similarity=0.128 Sum_probs=130.7
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCC--------C
Q 002164 650 VQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT--------T 721 (958)
Q Consensus 650 ~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~--------~ 721 (958)
..+.+.+|+|.+. ++|.|+||.+||+. + ...+||+++.+++ +
T Consensus 90 ~~~~~~i~lP~~~----~~p~Pvii~i~~~~----------------~----------~~~~G~a~~~~~~~~v~~~~~~ 139 (375)
T 3pic_A 90 ISFTVTITYPSSG----TAPYPAIIGYGGGS----------------L----------PAPAGVAMINFNNDNIAAQVNT 139 (375)
T ss_dssp EEEEEEEECCSSS----CSSEEEEEEETTCS----------------S----------CCCTTCEEEEECHHHHSCCSSG
T ss_pred eEEEEEEECCCCC----CCCccEEEEECCCc----------------c----------ccCCCeEEEEecccccccccCC
Confidence 4588999999752 35799999999841 1 1357899988543 2
Q ss_pred CCCCCCCccc---c----hhhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEecc
Q 002164 722 PIIGEGDEEA---N----DRFVEQLVACAEAAVEEVVRRG--VAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSG 792 (958)
Q Consensus 722 ~~~G~G~~~~---~----~~~~~~~~~D~~~av~~l~~~~--~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~ 792 (958)
+++|+|. +. + .........|+..++|||..++ .||++||+|+|||+||.+|+++++.+ ++|+++|..++
T Consensus 140 gs~g~g~-f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~ 217 (375)
T 3pic_A 140 GSRGQGK-FYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQES 217 (375)
T ss_dssp GGTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESC
T ss_pred CCcccee-cccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccC
Confidence 2344442 11 0 0112344679999999999998 99999999999999999999999999 68999999876
Q ss_pred CCCCCCC-C-------CCcccc------cchhhhcHHHHHhcC------ccc---ccCC-CCCCEEEEeeCCCCCCCCCh
Q 002164 793 AYNRTLT-P-------FGFQNE------DRTLWEATSTYVEMS------PFM---SANK-LKKPILLVHGEEDNNSGTLT 848 (958)
Q Consensus 793 ~~~~~~~-~-------~~~~~~------~~~~~~~~~~~~~~s------p~~---~~~~-~~~P~Lii~G~~D~~v~~~~ 848 (958)
..+.... . ++-... ....|-.+. |..+. |++ .+.- ...|+||+.| +|..++ +
T Consensus 218 g~~G~~~~R~~~~~~~~Ge~v~~~~~~~~e~~Wf~~~-~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~--~ 293 (375)
T 3pic_A 218 GAGGSACWRISDYLKSQGANIQTASEIIGEDPWFSTT-FNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLG--P 293 (375)
T ss_dssp CTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCSCSCGG-GGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGC--H
T ss_pred CCCchhhhhhhhhhcccCccccccccccCcccccccc-hhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccC--c
Confidence 4332110 0 000000 001221111 11111 111 1111 2479999999 888877 6
Q ss_pred HHHHHHHHHH----HhCCC--cEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhccCC
Q 002164 849 MQSDRFFNAL----KGHGA--LCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNT 902 (958)
Q Consensus 849 ~~~~~~~~~l----~~~g~--~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~ 902 (958)
......+.++ +..|. .+.+.+..+.+|.....+ ..+.+.+||++||++..
T Consensus 294 ~g~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~fp~~----~~~~~~~F~~k~L~~~~ 349 (375)
T 3pic_A 294 QSCFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAFPSN----QQSQLTAFVQKFLLGQS 349 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCCCGG----GHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHcCCccceEEEeeCCCccccCCHH----HHHHHHHHHHHHhCCCC
Confidence 6554333333 33443 566654344456322222 24678999999998753
No 293
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.48 E-value=4.5e-12 Score=153.61 Aligned_cols=217 Identities=13% Similarity=0.080 Sum_probs=137.7
Q ss_pred eceeEEEccCCCCC-C-ceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCc
Q 002164 163 TGIGIHQLFPDGKL-G-QEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDI 240 (958)
Q Consensus 163 ~~l~i~~~~~dg~~-~-~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~ 240 (958)
+.|.+|++..+... + ..+.++++. ..+....|||||++|+.... ...|.+||+.+++..+.......
T Consensus 405 ~~i~~W~~~~~~~~~~~~~~~~~~h~--~~v~~v~~s~~g~~l~sgs~---------Dg~v~vwd~~~~~~~~~~~~h~~ 473 (694)
T 3dm0_A 405 KSIILWKLTKDDKAYGVAQRRLTGHS--HFVEDVVLSSDGQFALSGSW---------DGELRLWDLAAGVSTRRFVGHTK 473 (694)
T ss_dssp SEEEEEECCCSTTCSCEEEEEEECCS--SCEEEEEECTTSSEEEEEET---------TSEEEEEETTTTEEEEEEECCSS
T ss_pred CcEEEEEccCCCcccccccceecCCC--CcEEEEEECCCCCEEEEEeC---------CCcEEEEECCCCcceeEEeCCCC
Confidence 57899998653211 1 134555533 56889999999999988652 56899999998876544333332
Q ss_pred cccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEE
Q 002164 241 YLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVS 320 (958)
Q Consensus 241 ~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~ 320 (958)
. +..++|+|||+.|+..+ ....|.+++
T Consensus 474 ~----v~~~~~s~~~~~l~s~s-------------------------------------------------~D~~i~iwd 500 (694)
T 3dm0_A 474 D----VLSVAFSLDNRQIVSAS-------------------------------------------------RDRTIKLWN 500 (694)
T ss_dssp C----EEEEEECTTSSCEEEEE-------------------------------------------------TTSCEEEEC
T ss_pred C----EEEEEEeCCCCEEEEEe-------------------------------------------------CCCEEEEEE
Confidence 2 77899999999998762 123355556
Q ss_pred c-CCeeeecCC----C-ccccccccCCCCc--EEEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCc
Q 002164 321 L-DGTVKEIGP----P-AVYTSLDPSPDEK--YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIP 391 (958)
Q Consensus 321 ~-~g~~~~l~~----~-~~~~~~~~SpDGk--~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p 391 (958)
. +.....+.. . ..+..++|+|++. .|+..+. ++.|.+||+.+.... .+..+
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~-------------d~~v~vwd~~~~~~~~~~~~h------- 560 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW-------------DKTVKVWNLSNCKLRSTLAGH------- 560 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET-------------TSCEEEEETTTCCEEEEECCC-------
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC-------------CCeEEEEECCCCcEEEEEcCC-------
Confidence 5 333333321 1 4577889999984 4554442 348999999865443 33222
Q ss_pred ccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEE
Q 002164 392 IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALV 471 (958)
Q Consensus 392 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~ 471 (958)
...+..+.|+|||+.|+.. +..+.|.+||+ ..++..........+..++|||++..|+
T Consensus 561 ------~~~v~~v~~spdg~~l~sg-------------~~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 561 ------TGYVSTVAVSPDGSLCASG-------------GKDGVVLLWDL---AEGKKLYSLEANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp ------SSCEEEEEECTTSSEEEEE-------------ETTSBCEEEET---TTTEEEECCBCSSCEEEEEECSSSSEEE
T ss_pred ------CCCEEEEEEeCCCCEEEEE-------------eCCCeEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcEEE
Confidence 1345789999999987763 44667889996 3332211122344567789999998777
Q ss_pred EEEeccccceEEEEEcCCC
Q 002164 472 YESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 472 ~~~~~~~~~~~l~~~~~~~ 490 (958)
.... + .|.++++.+
T Consensus 619 ~~~~-~----~i~iwd~~~ 632 (694)
T 3dm0_A 619 AATE-H----GIKIWDLES 632 (694)
T ss_dssp EEET-T----EEEEEETTT
T ss_pred EEcC-C----CEEEEECCC
Confidence 6532 2 255555555
No 294
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.48 E-value=4.2e-13 Score=141.37 Aligned_cols=198 Identities=12% Similarity=0.081 Sum_probs=121.1
Q ss_pred CceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHH
Q 002164 669 PLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (958)
Q Consensus 669 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~a 746 (958)
+.|+||++||..... ..| ...+..|+ .+|.|++ .+.+|+|.+.... .......+|+.++
T Consensus 19 ~~~~vv~~HG~~~~~-----------~~~----~~~~~~l~-~~~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 79 (267)
T 3fla_A 19 ARARLVCLPHAGGSA-----------SFF----FPLAKALA-PAVEVLA---VQYPGRQDRRHEPPVDSIGGLTNRLLEV 79 (267)
T ss_dssp CSEEEEEECCTTCCG-----------GGG----HHHHHHHT-TTEEEEE---ECCTTSGGGTTSCCCCSHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCc-----------hhH----HHHHHHhc-cCcEEEE---ecCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 479999999964211 111 13344444 4599999 5556777664322 2344555555555
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCc----eeEEEEeccCCCCCCCCCCccccc---------------
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHL----FCCGIARSGAYNRTLTPFGFQNED--------------- 807 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~~~~~~~~~~~~~~~~~--------------- 807 (958)
++.+ +.+++.|+|||+||.+++.++.+.|++ ++++++.++...............
T Consensus 80 l~~~------~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (267)
T 3fla_A 80 LRPF------GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSD 153 (267)
T ss_dssp TGGG------TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHH
T ss_pred HHhc------CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcc
Confidence 5443 346899999999999999999999886 888888876532211100000000
Q ss_pred chhhhcH--------------HHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCC
Q 002164 808 RTLWEAT--------------STYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFE 873 (958)
Q Consensus 808 ~~~~~~~--------------~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~ 873 (958)
.....++ ..+..+..... .++++|+|+++|++|..+| +....++.+.+.. +++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~g- 226 (267)
T 3fla_A 154 AAMLADPELLAMVLPAIRSDYRAVETYRHEPG-RRVDCPVTVFTGDHDPRVS--VGEARAWEEHTTG---PADLRVLPG- 226 (267)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHCCCCTT-CCBSSCEEEEEETTCTTCC--HHHHHGGGGGBSS---CEEEEEESS-
T ss_pred hhhccCHHHHHHHHHHHHHHHHhhhccccccc-CcCCCCEEEEecCCCCCCC--HHHHHHHHHhcCC---CceEEEecC-
Confidence 0000000 11111221111 5688999999999999998 7777776655432 589999999
Q ss_pred CccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 874 SHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 874 ~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
||.+. .++...+.+.+.+||.+...
T Consensus 227 gH~~~-~~~~~~~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 227 GHFFL-VDQAAPMIATMTEKLAGPAL 251 (267)
T ss_dssp STTHH-HHTHHHHHHHHHHHTC----
T ss_pred Cceee-ccCHHHHHHHHHHHhccccc
Confidence 99864 45566777778888776543
No 295
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.48 E-value=2.7e-13 Score=142.31 Aligned_cols=197 Identities=9% Similarity=-0.042 Sum_probs=124.7
Q ss_pred eEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHHHH
Q 002164 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEAAV 747 (958)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~av 747 (958)
|.||++||...... .| ......|+++||.|++ .|.+|+|.+.... .......+|+.+.+
T Consensus 4 ~~vvllHG~~~~~~-----------~w----~~~~~~L~~~g~~via---~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l 65 (257)
T 3c6x_A 4 AHFVLIHTICHGAW-----------IW----HKLKPLLEALGHKVTA---LDLAASGVDPRQIEEIGSFDEYSEPLLTFL 65 (257)
T ss_dssp CEEEEECCTTCCGG-----------GG----TTHHHHHHHTTCEEEE---ECCTTSTTCSCCGGGCCSHHHHTHHHHHHH
T ss_pred CcEEEEcCCccCcC-----------CH----HHHHHHHHhCCCEEEE---eCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 56889999642211 11 1345578889999999 6667888875421 12455566666555
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCC-CCCCCC-----------Ccccc---------
Q 002164 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN-RTLTPF-----------GFQNE--------- 806 (958)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~-~~~~~~-----------~~~~~--------- 806 (958)
+.+ +. .+++.|+||||||.+++.++.++|++++++|.+++... ...... .+...
T Consensus 66 ~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T 3c6x_A 66 EAL---PP--GEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDG 140 (257)
T ss_dssp HTS---CT--TCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETT
T ss_pred Hhc---cc--cCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCC
Confidence 443 11 25899999999999999999999999999998876421 000000 00000
Q ss_pred -------cch------hhh--cHH--HHH--hcCcc----------ccc--CC-CCCCEEEEeeCCCCCCCCChHHHHHH
Q 002164 807 -------DRT------LWE--ATS--TYV--EMSPF----------MSA--NK-LKKPILLVHGEEDNNSGTLTMQSDRF 854 (958)
Q Consensus 807 -------~~~------~~~--~~~--~~~--~~sp~----------~~~--~~-~~~P~Lii~G~~D~~v~~~~~~~~~~ 854 (958)
... .+. ... .+. ...+. ... .. .++|+|+++|++|..+| +..++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p--~~~~~~~ 218 (257)
T 3c6x_A 141 KEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFL--PEFQLWQ 218 (257)
T ss_dssp EEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSC--HHHHHHH
T ss_pred CccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccC--HHHHHHH
Confidence 000 000 000 000 00110 000 11 26799999999999998 8888888
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 855 FNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 855 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
.+.+.. .+++++|++||... .+....+.+.+.+|++.+
T Consensus 219 ~~~~~~----~~~~~i~~~gH~~~-~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 219 IENYKP----DKVYKVEGGDHKLQ-LTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHSCC----SEEEECCSCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred HHHCCC----CeEEEeCCCCCCcc-cCCHHHHHHHHHHHHHhc
Confidence 776643 48899999999873 566788888899998754
No 296
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.48 E-value=2.1e-12 Score=137.54 Aligned_cols=212 Identities=11% Similarity=0.108 Sum_probs=130.3
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCC--------CC
Q 002164 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPT--------TP 722 (958)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~--------~~ 722 (958)
.+.+.+|+|.+ ++|.|+||.+||+. . ...+||+++.+++ .+
T Consensus 124 sf~~~i~lP~g-----~~P~Pvii~~~~~~----------------~----------~~~~G~A~i~f~~~~va~d~~~g 172 (433)
T 4g4g_A 124 SFSASIRKPSG-----AGPFPAIIGIGGAS----------------I----------PIPSNVATITFNNDEFGAQMGSG 172 (433)
T ss_dssp EEEEEEECCSS-----SCCEEEEEEESCCC----------------S----------CCCTTSEEEEECHHHHSCCSSGG
T ss_pred EEEEEEECCCC-----CCCccEEEEECCCc----------------c----------ccCCCeEEEEeCCcccccccCCC
Confidence 46999999975 35799999999741 0 1356999988544 22
Q ss_pred CCCCCCcccc-----hhh--HHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEec
Q 002164 723 IIGEGDEEAN-----DRF--VEQLVACAEAAVEEVVR----RGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARS 791 (958)
Q Consensus 723 ~~G~G~~~~~-----~~~--~~~~~~D~~~av~~l~~----~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 791 (958)
++|+|. +.. ..+ ......++..++|||.. ++.||++||+|+|+|+||..|+++++.+ ++|+++|+.+
T Consensus 173 srG~g~-f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~ 250 (433)
T 4g4g_A 173 SRGQGK-FYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQE 250 (433)
T ss_dssp GTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEES
T ss_pred cCCccc-cccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEec
Confidence 344443 110 111 23346799999999999 8899999999999999999999999999 6899999987
Q ss_pred cCCCCCCC-C-------CCcc--c----ccchhhhcHHHHHhcC------cccc---cCC-CCCCEEEEeeCCCCCCCCC
Q 002164 792 GAYNRTLT-P-------FGFQ--N----EDRTLWEATSTYVEMS------PFMS---ANK-LKKPILLVHGEEDNNSGTL 847 (958)
Q Consensus 792 ~~~~~~~~-~-------~~~~--~----~~~~~~~~~~~~~~~s------p~~~---~~~-~~~P~Lii~G~~D~~v~~~ 847 (958)
+..+.... . ++.. . .....|-.+. |..+. |+++ +.- ...|+|++.| +|..++
T Consensus 251 sg~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~-f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~-- 326 (433)
T 4g4g_A 251 SGAGGAACWRISDQQKAAGANIQTAAQIITENPWFSRN-FDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLG-- 326 (433)
T ss_dssp CCTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCTT-TGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTC--
T ss_pred CCCCchhhhhhchhhcccCcchhhhhcccCCccccchh-hHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCC--
Confidence 64331110 0 0000 0 0001121110 11110 1111 011 1479999999 888776
Q ss_pred hHHHHHHHHHHH------hCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhccCCC
Q 002164 848 TMQSDRFFNALK------GHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYCVSNTA 903 (958)
Q Consensus 848 ~~~~~~~~~~l~------~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~~ 903 (958)
+......+.+++ .......+.+.++.+|.....+ ....+.+||++||++...
T Consensus 327 p~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~----~r~~~~~F~~k~Lkg~~~ 384 (433)
T 4g4g_A 327 PVSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSS----QNQDLNSYINYFLLGQGS 384 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGG----GHHHHHHHHHHHTTCCSC
T ss_pred cHHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHH----HHHHHHHHHHHHhCCCCC
Confidence 665443333332 2334677766555566532222 246679999999987643
No 297
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.48 E-value=5.6e-13 Score=132.80 Aligned_cols=128 Identities=14% Similarity=0.114 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHH
Q 002164 736 VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATS 815 (958)
Q Consensus 736 ~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (958)
.....+|+.++++. .+ +++.++|||+||.+++.++.++|++++++|+++|...... .
T Consensus 58 ~~~~~~~~~~~~~~------~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~---~------------- 114 (191)
T 3bdv_A 58 LDRWVLAIRRELSV------CT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF---E------------- 114 (191)
T ss_dssp HHHHHHHHHHHHHT------CS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG---T-------------
T ss_pred HHHHHHHHHHHHHh------cC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc---c-------------
Confidence 34555565555543 23 6899999999999999999999999999999998643210 0
Q ss_pred HHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc--cHHHHHHHHHHH
Q 002164 816 TYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARE--SIMHVLWETDRW 893 (958)
Q Consensus 816 ~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~--~~~~~~~~i~~f 893 (958)
..+...+.++++|+|+++|++|..+| ++.++++.+.+ .++++++++++|...... ...+..+.+.+|
T Consensus 115 ----~~~~~~~~~~~~P~lii~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~f 183 (191)
T 3bdv_A 115 ----IDDRIQASPLSVPTLTFASHNDPLMS--FTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEF 183 (191)
T ss_dssp ----CTTTSCSSCCSSCEEEEECSSBTTBC--HHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHH
T ss_pred ----CccccccccCCCCEEEEecCCCCcCC--HHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHH
Confidence 00113456788999999999999998 88888888876 258999999999974321 334455778888
Q ss_pred HHHh
Q 002164 894 LQKY 897 (958)
Q Consensus 894 l~~~ 897 (958)
|.+.
T Consensus 184 l~~~ 187 (191)
T 3bdv_A 184 SEIL 187 (191)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 8764
No 298
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.47 E-value=3.8e-13 Score=153.57 Aligned_cols=68 Identities=13% Similarity=0.124 Sum_probs=54.8
Q ss_pred cccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeC-CCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 824 MSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILP-FESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 824 ~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p-~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
..+.++++|+|+++|++|..+| ++.++++.+.+. ..++++++ ++||... .+....+.+.|.+||.+++
T Consensus 375 ~~l~~i~~PvLvi~G~~D~~~p--~~~~~~l~~~~p----~~~~~~i~~~~GH~~~-~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 375 EALAMITQPALIICARSDGLYS--FDEHVEMGRSIP----NSRLCVVDTNEGHDFF-VMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHTTCCSCEEEEECTTCSSSC--HHHHHHHHHHST----TEEEEECCCSCGGGHH-HHTHHHHHHHHHHHHTC--
T ss_pred HHhhcCCCCEEEEEeCCCCCCC--HHHHHHHHHHCC----CcEEEEeCCCCCcchH-HhCHHHHHHHHHHHHHHhc
Confidence 4467889999999999999998 888888887765 36999999 8999864 4556778888889987654
No 299
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.46 E-value=2e-11 Score=136.87 Aligned_cols=251 Identities=8% Similarity=-0.031 Sum_probs=156.1
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc-------eeeccCCCCccccccccceEEecC----C--
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK-------ARPLFQSPDIYLNAIFDNFVWVNN----S-- 255 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~-------~~~lt~~~~~~~~~~~~~~~wspD----G-- 255 (958)
..+...+|+| +.|+... ....|++|++++++ ...+...... +..++|+|+ |
T Consensus 17 ~~i~~~~~~~--~~l~s~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCS---------GDGYLKVWDNKLLDNENPKDKSYSHFVHKSG-----LHHVDVLQAIERDAFE 80 (397)
T ss_dssp SCEEEEEECS--SEEEEEE---------TTSEEEEEESBCCTTCCGGGGEEEEECCTTC-----EEEEEEEEEEETTTEE
T ss_pred cCeEEEEecC--CeEEEEc---------CCCEEEEEECCCcccccCCCcceEEecCCCc-----EEEEEEecccccCCcc
Confidence 4788999998 6676654 25689999999877 4444332222 778999999 9
Q ss_pred -eEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe------eee
Q 002164 256 -TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT------VKE 327 (958)
Q Consensus 256 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~------~~~ 327 (958)
+.|+... ....|.++++ +++ ...
T Consensus 81 ~~~l~s~~-------------------------------------------------~dg~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 81 LCLVATTS-------------------------------------------------FSGDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EEEEEEEE-------------------------------------------------TTSCEEEEEEEECTTTCCEEEEE
T ss_pred ccEEEEEc-------------------------------------------------CCCCEEEEEccCCccccccccee
Confidence 8888762 1234666666 554 455
Q ss_pred cCCC------ccccccccC----CCCcE-EEEEeecCCccccccCCCCCceeEEEeccC------ceE-E-----EeccC
Q 002164 328 IGPP------AVYTSLDPS----PDEKY-ILISSIHRPYSFIVPCGRFPRQVGVWTTDG------IFV-R-----ELCDL 384 (958)
Q Consensus 328 l~~~------~~~~~~~~S----pDGk~-l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~------~~~-~-----~l~~~ 384 (958)
+... ..+..++|+ |||+. |+..+. ++.+.+||+.. +.. + .+...
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV-------------KGTTYIWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEET-------------TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeC-------------CCcEEEEeCCccccccccceeeccCcceeeee
Confidence 5433 567889999 99999 777663 34899999876 321 1 11100
Q ss_pred CccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe---e---cccc
Q 002164 385 PLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK---L---DLRY 458 (958)
Q Consensus 385 ~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~---~---~~~~ 458 (958)
. .........+..+.|+||| .++.. ...+.|++|++ ..+.....+.. . ...+
T Consensus 179 ~------~~~~~~~~~i~~~~~~~~~-~l~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 179 V------ESPMTPSQFATSVDISERG-LIATG-------------FNNGTVQISEL--STLRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp E------CCSSSSCCCCCEEEECTTS-EEEEE-------------CTTSEEEEEET--TTTEEEEEEECCC---CCCCCE
T ss_pred e------ccccCCCCCceEEEECCCc-eEEEE-------------eCCCcEEEEEC--CCCceeEEEeccccccccCCcc
Confidence 0 0000112456789999999 55542 44567999996 22322333343 3 6677
Q ss_pred CceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecc-------------CCccccCCCCCCceEeccCCceEE
Q 002164 459 GGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR-------------SSEDVYSDPGSPMMRRTSTGTYVI 525 (958)
Q Consensus 459 ~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~spdG~~l~ 525 (958)
..+.|+|+|+.|+.....+. ...|.++++..+ +....... ....+.. +.|+|||++|+
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~-~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~l~ 307 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNS-FGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMS------LSFNDSGETLC 307 (397)
T ss_dssp EEEEECSSTTEEEEEEEETT-EEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEE------EEECSSSSEEE
T ss_pred ceEEECCCCCEEEEEecCCC-CceEEEEECCCC--cccceeccCcccccccccccccCCcEEE------EEECCCCCEEE
Confidence 88999999999987765411 134777777664 33333332 2223333 78999999888
Q ss_pred EEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEec
Q 002164 526 AKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~ 569 (958)
....+ ..|++||+.+++......
T Consensus 308 ~~~~d---------------------g~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 308 SAGWD---------------------GKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEETT---------------------SEEEEEETTTTEEEEEEE
T ss_pred EEeCC---------------------CeEEEEEcCCCceeEEEe
Confidence 76521 269999998887766555
No 300
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.46 E-value=1.3e-12 Score=128.93 Aligned_cols=169 Identities=13% Similarity=-0.045 Sum_probs=110.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCc---EEEEcCCCCCCCCCCcccchhhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF---AILGGPTTPIIGEGDEEANDRFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~---~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~a 746 (958)
.|+||++||..... ..| ......|+++|| .|+. .+.+|+|.+.. ....++.+.
T Consensus 3 ~~~vv~~HG~~~~~-----------~~~----~~~~~~l~~~G~~~~~v~~---~d~~g~g~s~~------~~~~~~~~~ 58 (181)
T 1isp_A 3 HNPVVMVHGIGGAS-----------FNF----AGIKSYLVSQGWSRDKLYA---VDFWDKTGTNY------NNGPVLSRF 58 (181)
T ss_dssp CCCEEEECCTTCCG-----------GGG----HHHHHHHHHTTCCGGGEEE---CCCSCTTCCHH------HHHHHHHHH
T ss_pred CCeEEEECCcCCCH-----------hHH----HHHHHHHHHcCCCCccEEE---EecCCCCCchh------hhHHHHHHH
Confidence 47799999964211 111 245667889998 5888 45556665532 122333333
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCccc
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFM 824 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 824 (958)
++.+.+. .+.+++.++||||||.+++.++.+. |++++++|++++......... +...
T Consensus 59 ~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~---------------~~~~---- 117 (181)
T 1isp_A 59 VQKVLDE--TGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKA---------------LPGT---- 117 (181)
T ss_dssp HHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBC---------------CCCS----
T ss_pred HHHHHHH--cCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccccc---------------CCCC----
Confidence 3333333 2446899999999999999999987 889999999998643211100 0000
Q ss_pred ccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 825 SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 825 ~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
....++|+|++||++|..+| +..++ -...+++++++++|.+... + ..+.+.+.+||.+.
T Consensus 118 -~~~~~~p~l~i~G~~D~~v~--~~~~~---------~~~~~~~~~~~~gH~~~~~-~-~~~~~~i~~fl~~~ 176 (181)
T 1isp_A 118 -DPNQKILYTSIYSSADMIVM--NYLSR---------LDGARNVQIHGVGHIGLLY-S-SQVNSLIKEGLNGG 176 (181)
T ss_dssp -CTTCCCEEEEEEETTCSSSC--HHHHC---------CBTSEEEEESSCCTGGGGG-C-HHHHHHHHHHHTTT
T ss_pred -CCccCCcEEEEecCCCcccc--ccccc---------CCCCcceeeccCchHhhcc-C-HHHHHHHHHHHhcc
Confidence 01235799999999999998 66321 2235888999999997533 3 36778888888654
No 301
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.46 E-value=3.8e-11 Score=135.00 Aligned_cols=282 Identities=11% Similarity=0.110 Sum_probs=177.9
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
......|++ +.++.... ...|++|++++|+...+...... ..+..++|+|||+.|++..
T Consensus 95 ~~~~~~~s~--~~l~~~~~---------d~~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~------- 153 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVAL---------ERNVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGL------- 153 (401)
T ss_dssp TCBCEEECT--TSEEEEEE---------TTEEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEE-------
T ss_pred eEEEEeecC--CCEEEEEC---------CCeEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEEC-------
Confidence 455677875 44555442 56899999999987766554221 1277999999999998772
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCCC-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~~~~~~~~SpDGk~l 346 (958)
..+.|.++++ +++ .+.+... ..+..+.| +++.|
T Consensus 154 ------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 189 (401)
T 4aez_A 154 ------------------------------------------GNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVL 189 (401)
T ss_dssp ------------------------------------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEE
T ss_pred ------------------------------------------CCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEE
Confidence 1245777887 654 4444444 66777888 56777
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccC-c-eEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDG-I-FVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~-~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
+..+. ++.+.+||+.. + ....+..+ ...+..+.|+|||+.++..
T Consensus 190 ~~~~~-------------dg~i~i~d~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~s~-------- 235 (401)
T 4aez_A 190 SSGSR-------------SGAIHHHDVRIANHQIGTLQGH-------------SSEVCGLAWRSDGLQLASG-------- 235 (401)
T ss_dssp EEEET-------------TSEEEEEETTSSSCEEEEEECC-------------SSCEEEEEECTTSSEEEEE--------
T ss_pred EEEcC-------------CCCEEEEecccCcceeeEEcCC-------------CCCeeEEEEcCCCCEEEEE--------
Confidence 76663 34899999983 2 23333322 1455789999999987773
Q ss_pred cccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEe--ccccceEEEEEcCCCCCCCcEEEeccC
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESW--YKTRRTRTWVISPGSKDVAPRILFDRS 502 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~ 502 (958)
+..+.|.+||+ ..+.....+......+..+.|+|++..++.... .+ ..|.++++.++ +........
T Consensus 236 -----~~d~~v~iwd~--~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d---~~i~i~d~~~~--~~~~~~~~~ 303 (401)
T 4aez_A 236 -----GNDNVVQIWDA--RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMD---KQIHFWNAATG--ARVNTVDAG 303 (401)
T ss_dssp -----ETTSCEEEEET--TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTT---CEEEEEETTTC--CEEEEEECS
T ss_pred -----eCCCeEEEccC--CCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCC---CEEEEEECCCC--CEEEEEeCC
Confidence 44567999996 223333344456667888999999988887754 22 35777777664 333333222
Q ss_pred CccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEee
Q 002164 503 SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVAL 582 (958)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~ 582 (958)
..+.. +.|+|+|+.++..... ....|++||+.+++...+..-.+.
T Consensus 304 -~~v~~------~~~s~~~~~l~~~~g~-------------------~dg~i~v~~~~~~~~~~~~~~~~h--------- 348 (401)
T 4aez_A 304 -SQVTS------LIWSPHSKEIMSTHGF-------------------PDNNLSIWSYSSSGLTKQVDIPAH--------- 348 (401)
T ss_dssp -SCEEE------EEECSSSSEEEEEECT-------------------TTCEEEEEEEETTEEEEEEEEECC---------
T ss_pred -CcEEE------EEECCCCCeEEEEeec-------------------CCCcEEEEecCCccceeEEEecCC---------
Confidence 22232 7899999998875410 123699999988766555331111
Q ss_pred cCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002164 583 MSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (958)
Q Consensus 583 ~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~ 621 (958)
...-...+|++||+.++.... ...+.++++.+++.
T Consensus 349 ~~~v~~~~~s~dg~~l~s~~~----dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 349 DTRVLYSALSPDGRILSTAAS----DENLKFWRVYDGDH 383 (401)
T ss_dssp SSCCCEEEECTTSSEEEEECT----TSEEEEEECCC---
T ss_pred CCCEEEEEECCCCCEEEEEeC----CCcEEEEECCCCcc
Confidence 011123578999987765433 35688999887753
No 302
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.46 E-value=1.5e-12 Score=137.99 Aligned_cols=245 Identities=14% Similarity=0.156 Sum_probs=145.7
Q ss_pred cEEEEEEEeC-CCeEEEEEEEecCCCCCC---CCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCc
Q 002164 638 QKELIKYQRK-DGVQLSATLYLPPGYDPS---KDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF 713 (958)
Q Consensus 638 ~~~~~~~~~~-dg~~l~~~l~~P~~~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~ 713 (958)
+...+++.+. -|.++...+|+|++|... +++++|||.++||..... ..|...+ ...+..++.|.
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~-----------~~w~~~~-~~~~~~~~~~~ 80 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTP-----------DNASEKA-FWQFQADKYGF 80 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCH-----------HHHHHHS-CHHHHHHHHTC
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCCh-----------HHHHHhc-hHhHHHHHcCc
Confidence 4456666654 577899999999987532 234699999999964211 1111111 12334456789
Q ss_pred EEEEcCCCCC----C---------CCCCccc----------chhhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEe
Q 002164 714 AILGGPTTPI----I---------GEGDEEA----------NDRFVEQLVACAEAAVEEVVR----RGVAHPSKIAVGGH 766 (958)
Q Consensus 714 ~vl~~~~~~~----~---------G~G~~~~----------~~~~~~~~~~D~~~av~~l~~----~~~~d~~~i~l~G~ 766 (958)
+++.++.... . |.+..+. ...+....++++...|+.--. +...+.++.+|+|+
T Consensus 81 ~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~ 160 (299)
T 4fol_A 81 AIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGI 160 (299)
T ss_dssp EEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEB
T ss_pred hhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEec
Confidence 8887543111 0 1111110 112334455555555543221 11234578999999
Q ss_pred ChHHHHHHHHHHhC--CCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccC---CC-CCCEEEEeeCC
Q 002164 767 SYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSAN---KL-KKPILLVHGEE 840 (958)
Q Consensus 767 S~GG~~a~~~a~~~--p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~---~~-~~P~Lii~G~~ 840 (958)
||||+-|+.++.++ |.++.++.+.+|+.+....++...........+...+..+++...+. +. ..++||.+|++
T Consensus 161 SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~ 240 (299)
T 4fol_A 161 SMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDS 240 (299)
T ss_dssp THHHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETT
T ss_pred CchHHHHHHHHHhCCCCCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCC
Confidence 99999999999985 67899999999987754433322211112222233344445443333 22 35799999999
Q ss_pred CCCCCCChH-HHHHHHHHHHhCCCc--EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhhc
Q 002164 841 DNNSGTLTM-QSDRFFNALKGHGAL--CRLVILPFESHGYAARESIMHVLWETDRWLQKYCV 899 (958)
Q Consensus 841 D~~v~~~~~-~~~~~~~~l~~~g~~--~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 899 (958)
|.... .. ..+.|.++++.+|.+ +++...||.+|.+. -....++..++|..++|+
T Consensus 241 D~f~~--~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~---f~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 241 DPFLE--EHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYY---FVSTFVPEHAEFHARNLG 297 (299)
T ss_dssp CTTHH--HHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHTT
T ss_pred Ccchh--hhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHH---HHHHHHHHHHHHHHHhcC
Confidence 98742 11 236799999998876 78888999899863 234456677888888874
No 303
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.46 E-value=5.7e-13 Score=143.12 Aligned_cols=208 Identities=14% Similarity=0.084 Sum_probs=130.3
Q ss_pred eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCC
Q 002164 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIG 725 (958)
Q Consensus 646 ~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G 725 (958)
..+|..++...+- + .|.||++||.+.... .|. .....|+++ |.|++ .+.+|
T Consensus 16 ~~~g~~l~~~~~g-------~---~~~vv~lHG~~~~~~-----------~~~----~~~~~L~~~-~~vi~---~D~~G 66 (301)
T 3kda_A 16 EVDGVKLHYVKGG-------Q---GPLVMLVHGFGQTWY-----------EWH----QLMPELAKR-FTVIA---PDLPG 66 (301)
T ss_dssp EETTEEEEEEEEE-------S---SSEEEEECCTTCCGG-----------GGT----TTHHHHTTT-SEEEE---ECCTT
T ss_pred eeCCeEEEEEEcC-------C---CCEEEEECCCCcchh-----------HHH----HHHHHHHhc-CeEEE---EcCCC
Confidence 3488888876653 1 478999999753211 121 234567777 99999 56668
Q ss_pred CCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC---
Q 002164 726 EGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSK-IAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT--- 799 (958)
Q Consensus 726 ~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~-i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~--- 799 (958)
+|.+... ........+|+.++++.+ +.++ +.++||||||.+++.++.++|++++++|++++.......
T Consensus 67 ~G~S~~~~~~~~~~~~~~~l~~~l~~l------~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 140 (301)
T 3kda_A 67 LGQSEPPKTGYSGEQVAVYLHKLARQF------SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRF 140 (301)
T ss_dssp STTCCCCSSCSSHHHHHHHHHHHHHHH------CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGS
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHc------CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccch
Confidence 8877543 223456677777777665 2346 999999999999999999999999999999975321100
Q ss_pred ----------CCCc--c---cc-c------------chh---------hhcH---HHH-----------------H----
Q 002164 800 ----------PFGF--Q---NE-D------------RTL---------WEAT---STY-----------------V---- 818 (958)
Q Consensus 800 ----------~~~~--~---~~-~------------~~~---------~~~~---~~~-----------------~---- 818 (958)
.|.+ . .. . ... +... ..+ .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (301)
T 3kda_A 141 PAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNE 220 (301)
T ss_dssp BSEETTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHH
T ss_pred hhhcchhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhcc
Confidence 0000 0 00 0 000 0000 000 0
Q ss_pred ----hcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 819 ----EMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 819 ----~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
.......+.++++|+|+++|++| ++ +.....+.+ ....+++++++++||... .++...+.+.|.+|+
T Consensus 221 ~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~--~~~~~~~~~----~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~~l 291 (301)
T 3kda_A 221 SVRQNAELAKTRLQMPTMTLAGGGAGG--MG--TFQLEQMKA----YAEDVEGHVLPGCGHWLP-EECAAPMNRLVIDFL 291 (301)
T ss_dssp HHHHHHHHTTSCBCSCEEEEEECSTTS--CT--THHHHHHHT----TBSSEEEEEETTCCSCHH-HHTHHHHHHHHHHHH
T ss_pred chhhcccchhhccccCcceEEEecCCC--CC--hhHHHHHHh----hcccCeEEEcCCCCcCch-hhCHHHHHHHHHHHH
Confidence 00011122378999999999999 54 555555433 334589999999999873 556677777777777
Q ss_pred HHh
Q 002164 895 QKY 897 (958)
Q Consensus 895 ~~~ 897 (958)
.+.
T Consensus 292 ~~~ 294 (301)
T 3kda_A 292 SRG 294 (301)
T ss_dssp TTS
T ss_pred hhC
Confidence 663
No 304
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.45 E-value=7.1e-13 Score=142.74 Aligned_cols=196 Identities=14% Similarity=0.025 Sum_probs=123.7
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC--CcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR--GFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAV 747 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~--G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av 747 (958)
.|.||++||..... ..| ......|+++ ||.|++ .|.+|+|.+.... ...++|+.+.+
T Consensus 36 ~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~~~g~~vi~---~D~~G~G~s~~~~---~~~~~~~~~~l 94 (302)
T 1pja_A 36 YKPVIVVHGLFDSS-----------YSF----RHLLEYINETHPGTVVTV---LDLFDGRESLRPL---WEQVQGFREAV 94 (302)
T ss_dssp CCCEEEECCTTCCG-----------GGG----HHHHHHHHHHSTTCCEEE---CCSSCSGGGGSCH---HHHHHHHHHHH
T ss_pred CCeEEEECCCCCCh-----------hHH----HHHHHHHHhcCCCcEEEE---eccCCCccchhhH---HHHHHHHHHHH
Confidence 57889999953211 111 2346678888 999999 5666777765432 23455555666
Q ss_pred HHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-ceeEEEEeccCCCCCCCCCCc-----cc----------------
Q 002164 748 EEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-LFCCGIARSGAYNRTLTPFGF-----QN---------------- 805 (958)
Q Consensus 748 ~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~~~~~~~~~~~~~-----~~---------------- 805 (958)
..+.+.. .+++.++||||||.+++.++.++|+ +++++|++++..........+ ..
T Consensus 95 ~~~~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (302)
T 1pja_A 95 VPIMAKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQ 171 (302)
T ss_dssp HHHHHHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGG
T ss_pred HHHhhcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHH
Confidence 6665543 3689999999999999999999998 799999998765322110000 00
Q ss_pred --ccchhhhcH---HHHHhcC-----------------cccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHH------
Q 002164 806 --EDRTLWEAT---STYVEMS-----------------PFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNA------ 857 (958)
Q Consensus 806 --~~~~~~~~~---~~~~~~s-----------------p~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~------ 857 (958)
.....|.++ ..+.... ....+.+++ |+|+++|++|..+| +..+.++.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~--~~~~~~~~~~~~~~~~ 248 (302)
T 1pja_A 172 EFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVIT--PWQSSFFGFYDANETV 248 (302)
T ss_dssp GSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSS--SGGGGGTCEECTTCCE
T ss_pred HhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccc--hhHhhHhhhcCCcccc
Confidence 000001111 1110000 023456788 99999999999998 7777665321
Q ss_pred ------------------HHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 858 ------------------LKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 858 ------------------l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
+... ..++++++|++||... .+....+.+.+.+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 249 LEMEEQLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTAW-HSNRTLYETCIEPWL 301 (302)
T ss_dssp ECGGGSHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTTT-TSCHHHHHHHTGGGC
T ss_pred cchhhhhhhhhhhhchhhHhhc-CCeEEEEecCcccccc-ccCHHHHHHHHHHhc
Confidence 2222 2489999999999864 455666666666664
No 305
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.45 E-value=1.1e-11 Score=137.34 Aligned_cols=275 Identities=9% Similarity=-0.027 Sum_probs=140.9
Q ss_pred ceeEEEccCCCCCCceeeeccC--CCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcC-CCceeeccCCCCc
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGF--PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD-TGKARPLFQSPDI 240 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~--~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~-~g~~~~lt~~~~~ 240 (958)
.|+++.+..+. +..+.+... .........+|||||++|+.+.. . .|.+++++ +|+..++...+..
T Consensus 15 ~i~~~~~d~~~--g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~---------~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 15 AIFTVQFDDEK--LTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM---------K-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEEEETTT--TEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB---------T-EEEEEEEEETTEEEEEEEEECC
T ss_pred cEEEEEEECCC--CCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc---------c-eEEEEEECCCCCEEEeeEeecC
Confidence 47777663322 343333221 11125678899999998876542 2 67788876 6766554322110
Q ss_pred cccccccceEEecCCeEEE-EEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 241 YLNAIFDNFVWVNNSTLLV-CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 241 ~~~~~~~~~~wspDG~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
. ....++|+|||+.|+ ++... +. ...+.++ ....+ +...+|.+
T Consensus 83 g---~~~~~~~spdg~~l~~~~~~~--~~----------~~~~~~~--------------~~~~~-------g~v~v~~~ 126 (365)
T 1jof_A 83 G---HPRANDADTNTRAIFLLAAKQ--PP----------YAVYANP--------------FYKFA-------GYGNVFSV 126 (365)
T ss_dssp S---SGGGGCTTSCCEEEEEEECSS--TT----------CCEEEEE--------------ESSSC-------CEEEEEEE
T ss_pred C---CCccEEECCCCCEEEEEEecC--Cc----------ceeccce--------------eecCC-------ceEEEEcc
Confidence 1 034688999999643 33110 00 0000000 00000 11224434
Q ss_pred EcCCeee-ecC-----CCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc-CceEEEeccCCccccCcc
Q 002164 320 SLDGTVK-EIG-----PPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDIPI 392 (958)
Q Consensus 320 ~~~g~~~-~l~-----~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~-~~~~~~l~~~~~~~~~p~ 392 (958)
+.+|+.. .+. .......++|||||++|++.... ...|++|+++ +++.+.+.......
T Consensus 127 ~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~~---- 190 (365)
T 1jof_A 127 SETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT------------ANKLWTHRKLASGEVELVGSVDAPD---- 190 (365)
T ss_dssp CTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTSCEEEEEEEECSS----
T ss_pred CCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC------------CCEEEEEEECCCCCEEEeeeEecCC----
Confidence 3345432 222 12456788999999998766422 2489999998 56554432211000
Q ss_pred cccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCce----EEEeec------c------
Q 002164 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE----ILHKLD------L------ 456 (958)
Q Consensus 393 ~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~----~l~~~~------~------ 456 (958)
...+++.+.|||||+.+++.. ...+.+.+++.+. +.++.. .+.... .
T Consensus 191 ----~g~~p~~~~~spdg~~l~v~~------------~~~~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 253 (365)
T 1jof_A 191 ----PGDHPRWVAMHPTGNYLYALM------------EAGNRICEYVIDP-ATHMPVYTHHSFPLIPPGIPDRDPETGKG 253 (365)
T ss_dssp ----TTCCEEEEEECTTSSEEEEEE------------TTTTEEEEEEECT-TTCCEEEEEEEEESSCTTCCCBCTTTSSB
T ss_pred ----CCCCCCEeEECCCCCEEEEEE------------CCCCeEEEEEEeC-CCCcEEEccceEEcCCCCcCCcccccccc
Confidence 013467899999999887631 1133555554311 233332 121111 1
Q ss_pred -ccCcee-eecCCceEEEEEeccc----cceEEEEEcCCCCCCCcEEE---eccCCccccCCCCCCceEecc---CCceE
Q 002164 457 -RYGGIS-WCDDSLALVYESWYKT----RRTRTWVISPGSKDVAPRIL---FDRSSEDVYSDPGSPMMRRTS---TGTYV 524 (958)
Q Consensus 457 -~~~~~~-~spDg~~l~~~~~~~~----~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~sp---dG~~l 524 (958)
....++ |||||++|+.+..... ....+|.++. ++ +...+ .......... ++||| ||++|
T Consensus 254 ~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~g--~~~~~~~~~~~~~~~~~~------~a~sp~~~dg~~l 324 (365)
T 1jof_A 254 LYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CG--SIEKQLFLSPTPTSGGHS------NAVSPCPWSDEWM 324 (365)
T ss_dssp SEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TS--CEEEEEEEEECSSCCTTC------CCEEECTTCTTEE
T ss_pred cccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-CC--CEEEeeeeeecCCCCccc------ceecCCCcCCCEE
Confidence 245688 9999999865543221 0355666653 22 22221 1111111111 67899 89998
Q ss_pred EEEe
Q 002164 525 IAKI 528 (958)
Q Consensus 525 ~~~~ 528 (958)
+...
T Consensus 325 ~v~~ 328 (365)
T 1jof_A 325 AITD 328 (365)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8765
No 306
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.45 E-value=2e-12 Score=140.22 Aligned_cols=212 Identities=15% Similarity=0.113 Sum_probs=134.1
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G 727 (958)
+|.+++....-+ ++.|.||++||.+.... .|. .....|+ .+|.|++ .|.+|+|
T Consensus 15 ~g~~l~y~~~G~--------g~~~pvvllHG~~~~~~-----------~w~----~~~~~L~-~~~~via---~Dl~G~G 67 (316)
T 3afi_E 15 LGSSMAYRETGA--------QDAPVVLFLHGNPTSSH-----------IWR----NILPLVS-PVAHCIA---PDLIGFG 67 (316)
T ss_dssp TTEEEEEEEESC--------TTSCEEEEECCTTCCGG-----------GGT----TTHHHHT-TTSEEEE---ECCTTST
T ss_pred CCEEEEEEEeCC--------CCCCeEEEECCCCCchH-----------HHH----HHHHHHh-hCCEEEE---ECCCCCC
Confidence 788887665421 22457999999753221 111 1233454 4599999 6667888
Q ss_pred Ccccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC---CCCC--
Q 002164 728 DEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR---TLTP-- 800 (958)
Q Consensus 728 ~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~---~~~~-- 800 (958)
.+.... .......+|+.+.++.+ +-+++.|+||||||.+++.+|.++|++++++|++++.... ....
T Consensus 68 ~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 141 (316)
T 3afi_E 68 QSGKPDIAYRFFDHVRYLDAFIEQR------GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHT 141 (316)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc------CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccch
Confidence 875432 22456666666666543 2358999999999999999999999999999998763210 0000
Q ss_pred -----------CC-----ccccc----------------------chhhh-cHHHHHh-----------------cCc--
Q 002164 801 -----------FG-----FQNED----------------------RTLWE-ATSTYVE-----------------MSP-- 822 (958)
Q Consensus 801 -----------~~-----~~~~~----------------------~~~~~-~~~~~~~-----------------~sp-- 822 (958)
.. +.... ..... ..+.|.. ...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (316)
T 3afi_E 142 EVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAG 221 (316)
T ss_dssp CCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTT
T ss_pred hhccccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccc
Confidence 00 00000 00000 0000100 000
Q ss_pred ------------ccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHH
Q 002164 823 ------------FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWET 890 (958)
Q Consensus 823 ------------~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i 890 (958)
...+.++++|+|+++|++|..+| +..++++.+.+. ..+++++|++||... .+....+.+.|
T Consensus 222 ~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~p----~~~~~~i~~~GH~~~-~e~p~~~~~~i 294 (316)
T 3afi_E 222 EPADVYEALQSAHAALAASSYPKLLFTGEPGALVS--PEFAERFAASLT----RCALIRLGAGLHYLQ-EDHADAIGRSV 294 (316)
T ss_dssp BSHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSC--HHHHHHHHHHSS----SEEEEEEEEECSCHH-HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHhhhccCCCeEEEecCCCCccC--HHHHHHHHHhCC----CCeEEEcCCCCCCch-hhCHHHHHHHH
Confidence 01123578999999999999988 777777776654 368999999999864 56677888999
Q ss_pred HHHHHHhhc
Q 002164 891 DRWLQKYCV 899 (958)
Q Consensus 891 ~~fl~~~l~ 899 (958)
.+||.+...
T Consensus 295 ~~fl~~~~~ 303 (316)
T 3afi_E 295 AGWIAGIEA 303 (316)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhhcCC
Confidence 999987653
No 307
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.45 E-value=5e-12 Score=139.30 Aligned_cols=302 Identities=8% Similarity=-0.005 Sum_probs=173.6
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecC---CeEEEEEecCC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN---STLLVCTIPLL 265 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspD---G~~l~~~~~~~ 265 (958)
..+....|+|||+.++.+... ..+...|.+|++.+++...+..... ...+..++|+|+ |+.|+...
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~-----~~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~--- 87 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNF-----ARGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGD--- 87 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC-------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEE---
T ss_pred CceEEEEEcCCCceEEEecCc-----cCCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEec---
Confidence 468899999999888876521 1136688999998887654432111 112778999998 68888662
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--eeecCCC-cccccc----
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--VKEIGPP-AVYTSL---- 337 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--~~~l~~~-~~~~~~---- 337 (958)
....|.++++ +++ ...+... ..+..+
T Consensus 88 ----------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 88 ----------------------------------------------FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp ----------------------------------------------TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred ----------------------------------------------CCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 1234667777 543 3444433 445544
Q ss_pred --ccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCce--EEEeccCCccccCcccccccccCcceee----eecC
Q 002164 338 --DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSIN----WRSD 409 (958)
Q Consensus 338 --~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~--~~~l~~~~~~~~~p~~~~~~~~~~~~~~----~spD 409 (958)
+|+|||+.|+..+.+ +.+.+||+..+. ...+........ ..+..+. |+||
T Consensus 122 ~~~~s~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRD-------------GTVKVWDPRQKDDPVANMEPVQGENK---------RDCWTVAFGNAYNQE 179 (357)
T ss_dssp GGGCC-CCCEEEEEETT-------------SCEEEECTTSCSSCSEEECCCTTSCC---------CCEEEEEEECCCC-C
T ss_pred ccccCCCccEEEEEeCC-------------CeEEEEeCCCCCCcceeccccCCCCC---------CceEEEEEEeccCCC
Confidence 789999999887733 489999998543 333332221110 1233444 8899
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeec---CCceEEEEEeccccceEEEEE
Q 002164 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCD---DSLALVYESWYKTRRTRTWVI 486 (958)
Q Consensus 410 G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~sp---Dg~~l~~~~~~~~~~~~l~~~ 486 (958)
|+.++.. ...+.|++|++ ..++..........+..+.|+| +++.|+.....+. ..+|.+
T Consensus 180 ~~~l~~~-------------~~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~--i~i~d~ 241 (357)
T 3i2n_A 180 ERVVCAG-------------YDNGDIKLFDL---RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK--FHVFDM 241 (357)
T ss_dssp CCEEEEE-------------ETTSEEEEEET---TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE--EEEEEE
T ss_pred CCEEEEE-------------ccCCeEEEEEC---ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe--EEEEeC
Confidence 9987773 44568999996 5555555555667788899999 9998888754432 445544
Q ss_pred cCCCCCCCcEEE---eccCCccccCCCCCCceEeccCCc-eEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCC
Q 002164 487 SPGSKDVAPRIL---FDRSSEDVYSDPGSPMMRRTSTGT-YVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (958)
Q Consensus 487 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g 562 (958)
.... ...... .......+.. +.|+|+|+ .++.... ...|++||+..+
T Consensus 242 ~~~~--~~~~~~~~~~~~~~~~v~~------~~~~~~~~~~l~~~~~---------------------dg~i~iwd~~~~ 292 (357)
T 3i2n_A 242 RTQH--PTKGFASVSEKAHKSTVWQ------VRHLPQNRELFLTAGG---------------------AGGLHLWKYEYP 292 (357)
T ss_dssp EEEE--TTTEEEEEEEECCSSCEEE------EEEETTEEEEEEEEET---------------------TSEEEEEEEECC
T ss_pred cCCC--cccceeeeccCCCcCCEEE------EEECCCCCcEEEEEeC---------------------CCcEEEeecCCC
Confidence 3222 111111 1123333333 78999998 4544431 125888888765
Q ss_pred ceEEEecCCccccc-----ceeEee---cCCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002164 563 SKERIWESDKEKYY-----ETTVAL---MSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (958)
Q Consensus 563 ~~~~l~~~~~~~~~-----~~~~~~---~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g 619 (958)
.........+.... ..+..+ ...-...+|++||+.++++... ...++++++.+.
T Consensus 293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~---d~~i~iw~~~~~ 354 (357)
T 3i2n_A 293 IQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF---DQTVRVLIVTKL 354 (357)
T ss_dssp SCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET---TSEEEEEEECC-
T ss_pred cccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC---CCcEEEEECCCc
Confidence 44322221111000 000000 0111236789999888765543 245778876554
No 308
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=3e-11 Score=138.16 Aligned_cols=214 Identities=7% Similarity=0.005 Sum_probs=124.2
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEE--eccCCccccCcccccccccCcceeeeecC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE--LCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~--l~~~~~~~~~p~~~~~~~~~~~~~~~spD 409 (958)
..+..++|+|||++|++... .+.+++|++....... +... .+....+..+.|+||
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~-------------~g~v~~~~~~~~~~~~~~~~~~----------~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADK-------------FGDVYSIDINSIPEEKFTQEPI----------LGHVSMLTDVHLIKD 206 (450)
T ss_dssp SCEEEEEECTTSSEEEEEET-------------TSEEEEEETTSCCCSSCCCCCS----------EECSSCEEEEEEEEC
T ss_pred CCceEEEEcCCCCEEEEEeC-------------CCcEEEEecCCcccccccceee----------ecccCceEEEEEcCC
Confidence 56788999999999998863 3489999987543221 1011 112245678999999
Q ss_pred ---CCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE-EEeeccccCceeeecCCceEEEEEeccccceEEEE
Q 002164 410 ---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI-LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWV 485 (958)
Q Consensus 410 ---G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~-l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~ 485 (958)
|+.|+.. +..+.|++|++ ..+..... +..+...+..+.|+ ||+.|+..+.++ .|.+
T Consensus 207 ~~~~~~l~s~-------------~~d~~i~vwd~--~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~----~v~v 266 (450)
T 2vdu_B 207 SDGHQFIITS-------------DRDEHIKISHY--PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDD----KIFA 266 (450)
T ss_dssp TTSCEEEEEE-------------ETTSCEEEEEE--SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSS----EEEE
T ss_pred CCCCcEEEEE-------------cCCCcEEEEEC--CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCC----eEEE
Confidence 7766652 34567889986 23333333 23456677889999 999988776333 4666
Q ss_pred EcCCCCCCCcEEEeccCC--ccc-----------------cCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCC
Q 002164 486 ISPGSKDVAPRILFDRSS--EDV-----------------YSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (958)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (958)
+++.++ +......... ... ......-.+.|+|||++|+....
T Consensus 267 wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~----------------- 327 (450)
T 2vdu_B 267 WDWKTG--KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE----------------- 327 (450)
T ss_dssp EETTTC--CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET-----------------
T ss_pred EECCCC--cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC-----------------
Confidence 676664 2222221100 000 00000112678999998887751
Q ss_pred CCCCCCeEEEEEC--CCC---ceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCc------eEEEEE
Q 002164 547 PEGNIPFLDLFDI--NTG---SKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENT------QYYIQS 615 (958)
Q Consensus 547 ~~~~~~~L~~~dl--~~g---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~------~~~~~d 615 (958)
....|++|++ .++ +.......... +. .++|+++ .+++...+...|. .+|.++
T Consensus 328 ---~d~~i~iw~~~~~~~~~l~~~~~~~~~~~-----v~-------~~~~~~~--~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 328 ---ATKCIIILEMSEKQKGDLALKQIITFPYN-----VI-------SLSAHND--EFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp ---TCSEEEEEEECSSSTTCEEEEEEEECSSC-----EE-------EEEEETT--EEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred ---CCCeEEEEEeccCCCCceeeccEeccCCc-----eE-------EEEecCC--cEEEEEecccCCCCCCcceEEEEEE
Confidence 1125888998 443 22222222211 12 2457773 4666666655453 788888
Q ss_pred CCCCCeeEee
Q 002164 616 WPDKKSCQIT 625 (958)
Q Consensus 616 ~~~g~~~~Lt 625 (958)
..+++.+ ++
T Consensus 391 ~~~~~~~-~~ 399 (450)
T 2vdu_B 391 LNENSFV-VN 399 (450)
T ss_dssp TTTTEEE-EC
T ss_pred cCCCeEE-Ec
Confidence 7777654 56
No 309
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.44 E-value=1.8e-11 Score=133.99 Aligned_cols=245 Identities=8% Similarity=0.042 Sum_probs=156.9
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc----eeeccCCCCccccccccceEEecCCe-EEEEEec
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----ARPLFQSPDIYLNAIFDNFVWVNNST-LLVCTIP 263 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~----~~~lt~~~~~~~~~~~~~~~wspDG~-~l~~~~~ 263 (958)
..+...+|+|||+.|+.... ...|++|++.+++ .+.+...... +..++|+|||+ .|++..
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~---------d~~v~iw~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~- 76 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSW---------DGSLTVYKFDIQAKNVDLLQSLRYKHP-----LLCCNFIDNTDLQIYVGT- 76 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEET---------TSEEEEEEEETTTTEEEEEEEEECSSC-----EEEEEEEESSSEEEEEEE-
T ss_pred CcEEEEEEcCCCCEEEEEcC---------CCeEEEEEeCCCCccccceeeeecCCc-----eEEEEECCCCCcEEEEEc-
Confidence 46889999999999988652 5678888887776 4444433222 77899999999 888762
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc--CCeeeecCC--C-ccccccc
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIGP--P-AVYTSLD 338 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~~l~~--~-~~~~~~~ 338 (958)
....|.++++ +++...+.. . ..+..+.
T Consensus 77 ------------------------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 77 ------------------------------------------------VQGEILKVDLIGSPSFQALTNNEANLGICRIC 108 (342)
T ss_dssp ------------------------------------------------TTSCEEEECSSSSSSEEECBSCCCCSCEEEEE
T ss_pred ------------------------------------------------CCCeEEEEEeccCCceEeccccCCCCceEEEE
Confidence 1234667776 345556655 5 6788999
Q ss_pred cCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC---------ceEEEeccCCccccCcccccccccCcceeeeecC
Q 002164 339 PSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG---------IFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (958)
Q Consensus 339 ~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~---------~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spD 409 (958)
|+| ++.|+..+. ++.|.+||+.+ +.. +.... ....+..+.|+|+
T Consensus 109 ~~~-~~~l~s~~~-------------d~~i~iwd~~~~~~~~~~~~~~~--~~~~~-----------~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 109 KYG-DDKLIAASW-------------DGLIEVIDPRNYGDGVIAVKNLN--SNNTK-----------VKNKIFTMDTNSS 161 (342)
T ss_dssp EET-TTEEEEEET-------------TSEEEEECHHHHTTBCEEEEESC--SSSSS-----------SCCCEEEEEECSS
T ss_pred eCC-CCEEEEEcC-------------CCeEEEEcccccccccccccCCe--eeEEe-----------eCCceEEEEecCC
Confidence 999 888887763 34899999874 221 11111 1144578999999
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEeCCCCC-CCC-ceEE-EeeccccCceeeec-CCceEEEEEeccccceEEEE
Q 002164 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEG-PEIL-HKLDLRYGGISWCD-DSLALVYESWYKTRRTRTWV 485 (958)
Q Consensus 410 G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~-~~~l-~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~l~~ 485 (958)
+ ++.. ...+.|++|++ .. +.. .... ......+..+.|+| +|+.|+.....+. ..+|.
T Consensus 162 ~--l~~~-------------~~d~~i~i~d~--~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~--i~i~~ 222 (342)
T 1yfq_A 162 R--LIVG-------------MNNSQVQWFRL--PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR--VAVEF 222 (342)
T ss_dssp E--EEEE-------------ESTTEEEEEES--SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE--EEEEE
T ss_pred c--EEEE-------------eCCCeEEEEEC--CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc--EEEEE
Confidence 8 4432 34567999996 22 222 2222 33455677899999 9998887765432 66777
Q ss_pred EcCCCCC--CCcEEEeccCCc---------cccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeE
Q 002164 486 ISPGSKD--VAPRILFDRSSE---------DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFL 554 (958)
Q Consensus 486 ~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 554 (958)
++..+.. ......+..... .+.. ++|+|||++|+....+ ..|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~s~~~~~l~~~~~d---------------------g~i 275 (342)
T 1yfq_A 223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS------IEFSPRHKFLYTAGSD---------------------GII 275 (342)
T ss_dssp CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE------EEECTTTCCEEEEETT---------------------SCE
T ss_pred EcCCCcccccccceeeecccccccccccceeEEE------EEEcCCCCEEEEecCC---------------------ceE
Confidence 7665100 122223322211 2222 7899999988876521 259
Q ss_pred EEEECCCCceEEEec
Q 002164 555 DLFDINTGSKERIWE 569 (958)
Q Consensus 555 ~~~dl~~g~~~~l~~ 569 (958)
++||+.+++......
T Consensus 276 ~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 276 SCWNLQTRKKIKNFA 290 (342)
T ss_dssp EEEETTTTEEEEECC
T ss_pred EEEcCccHhHhhhhh
Confidence 999999887655443
No 310
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.44 E-value=7e-13 Score=147.75 Aligned_cols=229 Identities=14% Similarity=0.070 Sum_probs=136.1
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc--eeeccCCCCccccccccceEEecCCeEEEEEecCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK--ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRG 267 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~--~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~ 267 (958)
.+...+|||||++|+... ....|.+|++.++. .......... .+..++|+|||++|+...
T Consensus 13 ~v~~~~~s~~g~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s----- 74 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTT---------ATNQVELYEQDGNGWKHARTFSDHDK----IVTCVDWAPKSNRIVTCS----- 74 (377)
T ss_dssp CCSCCEECSSSSEEECCC---------SSSCBCEEEEETTEEEECCCBCCCSS----CEEEEEECTTTCCEEEEE-----
T ss_pred cEEEEEECCCCCEEEEec---------CCCEEEEEEccCCceEEEEEEecCCc----eEEEEEEeCCCCEEEEEe-----
Confidence 588899999999988743 35567777777763 3222222222 277899999999998762
Q ss_pred CCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe----eeecCCC-ccccccccCC
Q 002164 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----VKEIGPP-AVYTSLDPSP 341 (958)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~----~~~l~~~-~~~~~~~~Sp 341 (958)
....|.++++ +++ ...+... ..+..++|+|
T Consensus 75 --------------------------------------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 110 (377)
T 3dwl_C 75 --------------------------------------------QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP 110 (377)
T ss_dssp --------------------------------------------TTSSEEEC------CCCCEEECCCCSSCEEEEECCT
T ss_pred --------------------------------------------CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC
Confidence 1234666666 554 3334344 6788999999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCce----EEEeccCCccccCcccccccccCcceeeeecCCCCceEEE
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~----~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~ 417 (958)
||+.|+..+.+ +.+.+||++++. .+.+... ....+..+.|+|||+.++..
T Consensus 111 ~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~~l~~~- 164 (377)
T 3dwl_C 111 NEDKFAVGSGA-------------RVISVCYFEQENDWWVSKHLKRP------------LRSTILSLDWHPNNVLLAAG- 164 (377)
T ss_dssp TSSCCEEEESS-------------SCEEECCC-----CCCCEEECSS------------CCSCEEEEEECTTSSEEEEE-
T ss_pred CCCEEEEEecC-------------CeEEEEEECCcccceeeeEeecc------------cCCCeEEEEEcCCCCEEEEE-
Confidence 99999988743 489999998654 2333320 11456789999999977763
Q ss_pred EeccCCCcccccccCCeEEEEeCCCCC--C--------C--CceEE-E--eeccccCceeeecCCceEEEEEeccccceE
Q 002164 418 ETQDGGDAKVEVTPRDIIYTQQAEPVQ--G--------E--GPEIL-H--KLDLRYGGISWCDDSLALVYESWYKTRRTR 482 (958)
Q Consensus 418 ~~~~~~~~~~~~~~~~~l~~~~~~~~~--g--------~--~~~~l-~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 482 (958)
+..+.|.+|++.... . . ....+ . .+...+..+.|+|||+.|+..+.++. .+
T Consensus 165 ------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~--i~ 230 (377)
T 3dwl_C 165 ------------CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSS--VT 230 (377)
T ss_dssp ------------ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTE--EC
T ss_pred ------------eCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCc--EE
Confidence 345568888851000 0 0 00111 1 33445677999999999988765433 44
Q ss_pred EEEEcCCCCCCCc--EEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 483 TWVISPGSKDVAP--RILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 483 l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
+|.+. ++.... ..........+.. +.|+|||++|+...
T Consensus 231 iwd~~--~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 231 IAYPS--APEQPPRALITVKLSQLPLRS------LLWANESAIVAAGY 270 (377)
T ss_dssp -CEEC--STTSCEEECCCEECSSSCEEE------EEEEETTEEEEEES
T ss_pred EEECC--CCCCcceeeEeecCCCCceEE------EEEcCCCCEEEEEc
Confidence 55544 431111 1112222222333 78999999887654
No 311
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.44 E-value=5.2e-12 Score=140.13 Aligned_cols=226 Identities=13% Similarity=0.091 Sum_probs=146.5
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc---eeeccCCCCccccccccceEEecCCeEEEEEecCC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK---ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLL 265 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~---~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~ 265 (958)
..+...+|+|||+.|++.. ....|++|++++++ ...+..... . +..++|+|||+.|+...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~h~~-~----v~~~~~~~~~~~l~~~~--- 71 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICP---------NNHEVHIYEKSGNKWVQVHELKEHNG-Q----VTGVDWAPDSNRIVTCG--- 71 (372)
T ss_dssp SCCCEEEECTTSSEEEEEC---------SSSEEEEEEEETTEEEEEEEEECCSS-C----EEEEEEETTTTEEEEEE---
T ss_pred CCeEEEEECCCCCEEEEEe---------CCCEEEEEeCCCCcEEeeeeecCCCC-c----ccEEEEeCCCCEEEEEc---
Confidence 4688899999999998853 25688999988885 333332222 2 77899999999998762
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee---ecCCC-ccccccccC
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK---EIGPP-AVYTSLDPS 340 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~---~l~~~-~~~~~~~~S 340 (958)
....|.++++ +++.. .+... ..+..+.|+
T Consensus 72 ----------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 72 ----------------------------------------------TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp ----------------------------------------------TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred ----------------------------------------------CCCeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 1234667777 66422 22333 678899999
Q ss_pred CCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE----EEeccCCccccCcccccccccCcceeeeecCCCCceEE
Q 002164 341 PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV----RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYW 416 (958)
Q Consensus 341 pDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~----~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~ 416 (958)
|||+.|+....+ +.+.+|+++.+.. +.+.. .....+..+.|+|||+.++..
T Consensus 106 ~~~~~l~~~~~d-------------~~v~i~d~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 106 PNEKKFAVGSGS-------------RVISICYFEQENDWWVCKHIKK------------PIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp TTSSEEEEEETT-------------SSEEEEEEETTTTEEEEEEECT------------TCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEeCC-------------CEEEEEEecCCCcceeeeeeec------------ccCCCeeEEEEcCCCCEEEEE
Confidence 999999988733 4899999985541 22211 111345789999999977763
Q ss_pred EEeccCCCcccccccCCeEEEEeCCC----------------CCCCCceEEEeeccccCceeeecCCceEEEEEeccccc
Q 002164 417 AETQDGGDAKVEVTPRDIIYTQQAEP----------------VQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (958)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~~~~~----------------~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (958)
+..+.+++|++.. ..+.....+......+..+.|+|||+.|+.....+
T Consensus 161 -------------~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--- 224 (372)
T 1k8k_C 161 -------------SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS--- 224 (372)
T ss_dssp -------------ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT---
T ss_pred -------------cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC---
Confidence 3456788888410 01222233334455677899999999888776433
Q ss_pred eEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEE
Q 002164 481 TRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAK 527 (958)
Q Consensus 481 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 527 (958)
.|.++++..+ +...........+.. +.|+|||+.|+..
T Consensus 225 -~i~i~d~~~~--~~~~~~~~~~~~v~~------~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 225 -TVCLADADKK--MAVATLASETLPLLA------VTFITESSLVAAG 262 (372)
T ss_dssp -EEEEEEGGGT--TEEEEEECSSCCEEE------EEEEETTEEEEEE
T ss_pred -EEEEEECCCC--ceeEEEccCCCCeEE------EEEecCCCEEEEE
Confidence 3555666553 333333333333333 7899999877655
No 312
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.44 E-value=5e-12 Score=135.51 Aligned_cols=206 Identities=12% Similarity=0.018 Sum_probs=125.5
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++....- + .|.||++||.+.... .| ......|+++ |.|++ .|.+|+
T Consensus 16 ~~g~~l~y~~~G--------~--g~~lvllHG~~~~~~-----------~w----~~~~~~L~~~-~~via---~Dl~G~ 66 (294)
T 1ehy_A 16 LPDVKIHYVREG--------A--GPTLLLLHGWPGFWW-----------EW----SKVIGPLAEH-YDVIV---PDLRGF 66 (294)
T ss_dssp CSSCEEEEEEEE--------C--SSEEEEECCSSCCGG-----------GG----HHHHHHHHTT-SEEEE---ECCTTS
T ss_pred ECCEEEEEEEcC--------C--CCEEEEECCCCcchh-----------hH----HHHHHHHhhc-CEEEe---cCCCCC
Confidence 478888765542 1 367899999652211 11 1234455555 99999 666788
Q ss_pred CCcccch------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCC-
Q 002164 727 GDEEAND------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLT- 799 (958)
Q Consensus 727 G~~~~~~------~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~- 799 (958)
|.+..+. -......+|+.+.++.+ .-+++.|+||||||.+++.+|.++|++++++|++++.......
T Consensus 67 G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~ 140 (294)
T 1ehy_A 67 GDSEKPDLNDLSKYSLDKAADDQAALLDAL------GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPV 140 (294)
T ss_dssp TTSCCCCTTCGGGGCHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC---
T ss_pred CCCCCCccccccCcCHHHHHHHHHHHHHHc------CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchh
Confidence 8876542 12445566666665543 2358999999999999999999999999999999863211000
Q ss_pred ---------CCC--cc----------ccc---c--------------hhh-hc-HHHHH-----------------hc--
Q 002164 800 ---------PFG--FQ----------NED---R--------------TLW-EA-TSTYV-----------------EM-- 820 (958)
Q Consensus 800 ---------~~~--~~----------~~~---~--------------~~~-~~-~~~~~-----------------~~-- 820 (958)
.|. +. ... . ..+ +. .+.+. ..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (294)
T 1ehy_A 141 YFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIR 220 (294)
T ss_dssp --------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSS
T ss_pred hccchhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHh
Confidence 000 00 000 0 000 00 00010 00
Q ss_pred Cccc-----ccCCCCCCEEEEeeCCCCCCCCCh-HHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 821 SPFM-----SANKLKKPILLVHGEEDNNSGTLT-MQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 821 sp~~-----~~~~~~~P~Lii~G~~D~~v~~~~-~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
.... .+.++++|+|+++|++|..+| . .....+.+.+ ...+++++|++||... .++...+.+.+.+||
T Consensus 221 ~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 221 PDAALWTDLDHTMSDLPVTMIWGLGDTCVP--YAPLIEFVPKYY----SNYTMETIEDCGHFLM-VEKPEIAIDRIKTAF 293 (294)
T ss_dssp SSCCCCCTGGGSCBCSCEEEEEECCSSCCT--THHHHHHHHHHB----SSEEEEEETTCCSCHH-HHCHHHHHHHHHHHC
T ss_pred hhhhhcCCcccCcCCCCEEEEEeCCCCCcc--hHHHHHHHHHHc----CCCceEEeCCCCCChh-hhCHHHHHHHHHHHh
Confidence 0001 122788999999999999876 4 3444444332 2479999999999863 556677778888875
No 313
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.44 E-value=1.5e-11 Score=132.02 Aligned_cols=247 Identities=12% Similarity=0.113 Sum_probs=151.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++||..+.+ +.|.||++... +......+.++ ..
T Consensus 11 ~V~~~~~s~~g~~las~s~D---------------------------------~~v~iw~~~~~-~~~~~~~l~gH--~~ 54 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSD---------------------------------KTIKIFEVEGE-THKLIDTLTGH--EG 54 (297)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEEBCSS-CBCCCEEECCC--SS
T ss_pred ceEEEEECCCCCEEEEEeCC---------------------------------CEEEEEecCCC-CcEEEEEEccc--cC
Confidence 45678999999999998875 47899998531 11223455543 35
Q ss_pred cccceeecCC--CCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecC--CeEEEEEecCC
Q 002164 190 KLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPLL 265 (958)
Q Consensus 190 ~~~~~~wSPD--G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspD--G~~l~~~~~~~ 265 (958)
.+....|+|+ |+.|+... ....|.+|++.+++...+..... ....+..++|+|+ |..|+...
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s---------~D~~v~iWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~g~~l~s~s--- 120 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCS---------YDGKVMIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPMLLVAS--- 120 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEE---------TTTEEEEEEBSSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEE---
T ss_pred CeEEEEecCCCcCCEEEEEc---------CCCEEEEEEcCCCceEEEEEeec--CCCceeEEEeCcCCCCcEEEEEE---
Confidence 7889999874 88887755 25688889988775332221111 0112778999998 88888662
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe---eeecCCC-ccccccccC
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDPS 340 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~S 340 (958)
....|.++++ ++. ...+... ..+...+|+
T Consensus 121 ----------------------------------------------~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 121 ----------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp ----------------------------------------------TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred ----------------------------------------------CCCcEEEEEecCCCceeeeeeecccCccceEeec
Confidence 1234666666 442 2223233 567788999
Q ss_pred CC-------------CcEEEEEeecCCccccccCCCCCceeEEEeccCce--EEEeccCCccccCcccccccccCcceee
Q 002164 341 PD-------------EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (958)
Q Consensus 341 pD-------------Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~--~~~l~~~~~~~~~p~~~~~~~~~~~~~~ 405 (958)
|+ ++.|+..+. ++.|.+||+..+. ...+.... ++...+..++
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~-------------D~~v~lwd~~~~~~~~~~~~~l~----------~H~~~V~~v~ 211 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGA-------------DNLVKIWKYNSDAQTYVLESTLE----------GHSDWVRDVA 211 (297)
T ss_dssp CCC------------CCEEEEEET-------------TSCEEEEEEETTTTEEEEEEEEC----------CCSSCEEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcC-------------CCcEEEEEEcCCCceEEEEEEec----------CCCCceEEEE
Confidence 97 467776653 3489999987532 11111111 1224567899
Q ss_pred eecCC---CCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE---eeccccCceeeecCCceEEEEEecccc
Q 002164 406 WRSDK---PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH---KLDLRYGGISWCDDSLALVYESWYKTR 479 (958)
Q Consensus 406 ~spDG---~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~---~~~~~~~~~~~spDg~~l~~~~~~~~~ 479 (958)
|+||+ +.|+.. +..+.|.+|+++...+.....+. .....+..++|+|||+.|+....++.
T Consensus 212 ~sp~~~~~~~las~-------------s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~- 277 (297)
T 2pm7_B 212 WSPTVLLRSYMASV-------------SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK- 277 (297)
T ss_dssp ECCCCSSSEEEEEE-------------ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC-
T ss_pred ECCCCCCceEEEEE-------------ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc-
Confidence 99996 334331 44567888886211111111221 23345667899999999988765543
Q ss_pred ceEEEEEcCCC
Q 002164 480 RTRTWVISPGS 490 (958)
Q Consensus 480 ~~~l~~~~~~~ 490 (958)
.+||..+..+
T Consensus 278 -v~lw~~~~~g 287 (297)
T 2pm7_B 278 -VTLWKENLEG 287 (297)
T ss_dssp -EEEEEECTTS
T ss_pred -EEEEEECCCC
Confidence 7888876553
No 314
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.2e-11 Score=134.87 Aligned_cols=271 Identities=9% Similarity=0.019 Sum_probs=148.6
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||| .||..+.+ +.|.+|++..+. ......+....+..
T Consensus 16 ~v~~~~~s~~--~las~~~D---------------------------------~~i~lw~~~~~~-~~~~~~~~~~~h~~ 59 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTD---------------------------------RKIKLVSVKYDD-FTLIDVLDETAHKK 59 (330)
T ss_dssp CEEEEEEETT--EEEEEESS---------------------------------SCEEEEECSSSC-CEEEEEECTTCCCS
T ss_pred ceeeeccCCC--EEEEEcCC---------------------------------CEEEEEEecCCC-eEEEEEEecCCccC
Confidence 4567888888 67766654 478999985411 11122221111234
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCC-------ceeeccCCCCccccccccceEEecCCeEEEEEe
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-------KARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g-------~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~ 262 (958)
.+...+|+|||+.|+.... ...|.+|+++.+ +.......... .+..++|+|||++|+...
T Consensus 60 ~v~~v~~sp~~~~las~s~---------D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~----~V~~v~~sp~g~~las~s 126 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSF---------DSTVSIWAKEESADRTFEMDLLAIIEGHEN----EVKGVAWSNDGYYLATCS 126 (330)
T ss_dssp CEEEEEECTTSSEEEEEET---------TSCEEEEEC-------CCCEEEEEEC--------CEEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeC---------CCcEEEEEcccCcCccccceeEEEEcCCCC----cEEEEEECCCCCEEEEEe
Confidence 6889999999998887552 456777776432 11111111222 277899999999998762
Q ss_pred cCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C-C---e-eeecCCC-cccc
Q 002164 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D-G---T-VKEIGPP-AVYT 335 (958)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~-g---~-~~~l~~~-~~~~ 335 (958)
. ...|.++++ . + + ...+... ..+.
T Consensus 127 ~-------------------------------------------------D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 127 R-------------------------------------------------DKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp T-------------------------------------------------TSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred C-------------------------------------------------CCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 1 123555555 2 2 1 2234434 6788
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCC--CCc
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK--PST 413 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG--~~l 413 (958)
.++|+|||+.|+..+.+ +.|.+|++..+..+.+.... +....+..+.|+|++ ..|
T Consensus 158 ~v~~~p~~~~l~s~s~D-------------~~i~iW~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 158 HVIWHPSEALLASSSYD-------------DTVRIWKDYDDDWECVAVLN----------GHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp EEEECSSSSEEEEEETT-------------SCEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECCSSSSCEE
T ss_pred EEEECCCCCEEEEEcCC-------------CeEEEEECCCCCeeEEEEcc----------CCCCcEEEEEecCCCCeeEE
Confidence 99999999999877733 48999998765333322221 111345678999994 333
Q ss_pred eEEEEeccCCCcccccccCCeEEEEeCCCCCCCC---c---eEE---Ee-eccccCceeeecCCceEEEEEeccccceEE
Q 002164 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---P---EIL---HK-LDLRYGGISWCDDSLALVYESWYKTRRTRT 483 (958)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~---~---~~l---~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l 483 (958)
+.. +..+.|.+|++ .++. . ..+ .. +...+..++|++++ .|+....++. .+|
T Consensus 215 ~s~-------------s~D~~v~iw~~---~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~--v~i 275 (330)
T 2hes_X 215 CSG-------------SDDSTVRVWKY---MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV--LAV 275 (330)
T ss_dssp EEE-------------ETTSCEEEEEE---EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC--EEE
T ss_pred EEE-------------eCCCeEEEEEe---cCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE--EEE
Confidence 331 33456777774 2111 0 111 11 34456778999766 5655543332 667
Q ss_pred EEEcCCCCCCCcEE-EeccCCc-cccCCCCCCceEecc--CCceEEEEe
Q 002164 484 WVISPGSKDVAPRI-LFDRSSE-DVYSDPGSPMMRRTS--TGTYVIAKI 528 (958)
Q Consensus 484 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~sp--dG~~l~~~~ 528 (958)
|... ++..+... ....... .+.. ++|+| ||+.|+...
T Consensus 276 w~~~--~~~~~~~~~~~~~h~~~~v~~------v~~~~~~~~~~las~s 316 (330)
T 2hes_X 276 YEEV--DGEWKVFAKRALCHGVYEINV------VKWLELNGKTILATGG 316 (330)
T ss_dssp EEEE--TTEEEEEEEESCTTTTSCEEE------EEEC-----CCEEEEE
T ss_pred EEcC--CCceEEEeccccccccceEEE------EEEecCCCceEEEEec
Confidence 7654 21001111 1111111 2222 67999 788887766
No 315
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.43 E-value=7.4e-11 Score=128.87 Aligned_cols=298 Identities=8% Similarity=0.022 Sum_probs=169.9
Q ss_pred eeccCCCCCcccceeecCCC-CeEEEEEeeccccCCCCCceEEEEEcCCCce-----eeccCCCCccccccccceEEecC
Q 002164 181 EIQGFPDGAKLNFVTWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-----RPLFQSPDIYLNAIFDNFVWVNN 254 (958)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG-~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~-----~~lt~~~~~~~~~~~~~~~wspD 254 (958)
.|.++. +.+...+|+||+ +.|+... ....|.+|++..++. .+....... .+..++|+||
T Consensus 33 tL~GH~--~~V~~v~~sp~~~~~l~S~s---------~D~~i~vWd~~~~~~~~~~~~~~l~~h~~----~V~~~~~s~d 97 (340)
T 4aow_A 33 TLKGHN--GWVTQIATTPQFPDMILSAS---------RDKTIIMWKLTRDETNYGIPQRALRGHSH----FVSDVVISSD 97 (340)
T ss_dssp EECCCS--SCEEEEEECTTCTTEEEEEE---------TTSCEEEEEECCSSSCSEEEEEEECCCSS----CEEEEEECTT
T ss_pred EECCcc--CCEEEEEEeCCCCCEEEEEc---------CCCeEEEEECCCCCcccceeeEEEeCCCC----CEEEEEECCC
Confidence 355543 579999999985 5555543 234677777765432 111111122 2778999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-
Q 002164 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP- 331 (958)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~- 331 (958)
|+.|+... ....|..++. .+... .....
T Consensus 98 g~~l~s~~-------------------------------------------------~d~~i~~~~~~~~~~~~~~~~~~ 128 (340)
T 4aow_A 98 GQFALSGS-------------------------------------------------WDGTLRLWDLTTGTTTRRFVGHT 128 (340)
T ss_dssp SSEEEEEE-------------------------------------------------TTSEEEEEETTTTEEEEEEECCS
T ss_pred CCEEEEEc-------------------------------------------------ccccceEEeecccceeeeecCCC
Confidence 99998762 1234556666 44322 22222
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~ 411 (958)
.......++++++.|+..+.+ +.+.+||+.+.....+.... ....+..+.|++++.
T Consensus 129 ~~~~~~~~~~~~~~l~s~s~d-------------~~~~~~d~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 129 KDVLSVAFSSDNRQIVSGSRD-------------KTIKLWNTLGVCKYTVQDES-----------HSEWVSCVRFSPNSS 184 (340)
T ss_dssp SCEEEEEECTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSS-----------CSSCEEEEEECSCSS
T ss_pred CceeEEEEeecCccceeecCC-------------CeEEEEEeCCCceEEEEecc-----------ccCcccceEEccCCC
Confidence 455677899999999877633 47889998865543332211 113446688999887
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
..++.+. +....|.+|+. ..+.....+......+..++|+|||+.|+....++ .|.++++...
T Consensus 185 ~~~~~s~-----------~~d~~i~i~d~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg----~i~iwd~~~~ 247 (340)
T 4aow_A 185 NPIIVSC-----------GWDKLVKVWNL--ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG----QAMLWDLNEG 247 (340)
T ss_dssp SCEEEEE-----------ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC----EEEEEETTTT
T ss_pred CcEEEEE-----------cCCCEEEEEEC--CCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC----eEEEEEeccC
Confidence 7655322 33456888885 22323333444566678899999999888765433 3555566553
Q ss_pred CCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCC
Q 002164 492 DVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (958)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~ 571 (958)
+........ ..+.. +.|+|++..++... ...|++||++++.........
T Consensus 248 --~~~~~~~~~-~~v~~------~~~~~~~~~~~~~~----------------------d~~i~iwd~~~~~~~~~~~~~ 296 (340)
T 4aow_A 248 --KHLYTLDGG-DIINA------LCFSPNRYWLCAAT----------------------GPSIKIWDLEGKIIVDELKQE 296 (340)
T ss_dssp --EEEEEEECS-SCEEE------EEECSSSSEEEEEE----------------------TTEEEEEETTTTEEEEEECCC
T ss_pred --ceeeeecCC-ceEEe------eecCCCCceeeccC----------------------CCEEEEEECCCCeEEEecccc
Confidence 222222221 11222 67899987655443 125899999877654433322
Q ss_pred cccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002164 572 KEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (958)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~ 620 (958)
.. ..........-...+|+|||+.|+.... ...|++|++.+|+
T Consensus 297 ~~--~~~~~~h~~~v~~l~~s~dg~~l~sgs~----Dg~v~iW~~~tGt 339 (340)
T 4aow_A 297 VI--STSSKAEPPQCTSLAWSADGQTLFAGYT----DNLVRVWQVTIGT 339 (340)
T ss_dssp ---------CCCCCEEEEEECTTSSEEEEEET----TSCEEEEEEEC--
T ss_pred ce--eeeccCCCCCEEEEEECCCCCEEEEEeC----CCEEEEEeCCCcC
Confidence 11 0000000001123579999987664333 2458899988875
No 316
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=4.7e-11 Score=130.99 Aligned_cols=289 Identities=10% Similarity=-0.034 Sum_probs=157.3
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002164 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (958)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (958)
.++++++++.++... ....|+++|+++++..+....+... ....++|+|||+.++++..
T Consensus 4 g~~~~~~~~~~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~~~v~~~--------- 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN---------YPNNLHVVDVASDTVYKSCVMPDKF---GPGTAMMAPDNRTAYVLNN--------- 62 (349)
T ss_dssp CCCCCTTCEEEEEEE---------TTTEEEEEETTTTEEEEEEECSSCC---SSCEEEECTTSSEEEEEET---------
T ss_pred cccccCCCEEEEEeC---------CCCeEEEEECCCCcEEEEEecCCCC---CCceeEECCCCCEEEEEeC---------
Confidence 456787776555433 2668999999998876554433300 1458899999998876610
Q ss_pred CCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeee-cCCC-------ccccccccCCCC
Q 002164 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGPP-------AVYTSLDPSPDE 343 (958)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~-l~~~-------~~~~~~~~SpDG 343 (958)
...+|+++++ +++... +... ..+..++|||||
T Consensus 63 ---------------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg 103 (349)
T 1jmx_B 63 ---------------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG 103 (349)
T ss_dssp ---------------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS
T ss_pred ---------------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC
Confidence 2346889998 775442 3221 125678999999
Q ss_pred cEEEEEeecCCccccccCCCCCceeEEEeccCceEEE-eccCCccccCcccccccccCcceeeeecCCCCceEEEEeccC
Q 002164 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDG 422 (958)
Q Consensus 344 k~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~ 422 (958)
++|++......... ..+....+.+++||+++++... +..... ...+..++|+|||+ +++.
T Consensus 104 ~~l~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~~s~dg~-l~~~------ 164 (349)
T 1jmx_B 104 KEVYATVNPTQRLN-DHYVVKPPRLEVFSTADGLEAKPVRTFPM-----------PRQVYLMRAADDGS-LYVA------ 164 (349)
T ss_dssp SEEEEEEEEEEECS-SCEEECCCEEEEEEGGGGGGBCCSEEEEC-----------CSSCCCEEECTTSC-EEEE------
T ss_pred CEEEEEcccccccc-cccccCCCeEEEEECCCccccceeeeccC-----------CCcccceeECCCCc-EEEc------
Confidence 99998874300000 0000012489999998643211 111110 12345678999999 5542
Q ss_pred CCcccccccCCeEEEEeCCCCCCCCceEEEeecc-------------------------ccCceeeecCCceEEEEEecc
Q 002164 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL-------------------------RYGGISWCDDSLALVYESWYK 477 (958)
Q Consensus 423 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~-------------------------~~~~~~~spDg~~l~~~~~~~ 477 (958)
...|+++++ .+++......... ....+.+++|+........
T Consensus 165 ---------~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-- 230 (349)
T 1jmx_B 165 ---------GPDIYKMDV---KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD-- 230 (349)
T ss_dssp ---------SSSEEEECT---TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE--
T ss_pred ---------cCcEEEEeC---CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc--
Confidence 123888885 4444332221111 0011233333221111000
Q ss_pred ccceEEEEEcCCCCCCCcEEE-eccCCccccCCCCCCceEecc-CCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEE
Q 002164 478 TRRTRTWVISPGSKDVAPRIL-FDRSSEDVYSDPGSPMMRRTS-TGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLD 555 (958)
Q Consensus 478 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 555 (958)
....++.++..++. ...+ .......... +.||| ||++++.. . ..|+
T Consensus 231 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~sp~dg~~l~~~-~----------------------~~v~ 278 (349)
T 1jmx_B 231 -LLYGYLSVDLKTGK--THTQEFADLTELYFT------GLRSPKDPNQIYGV-L----------------------NRLA 278 (349)
T ss_dssp -EEEEEEEEETTTCC--EEEEEEEECSSCEEE------EEECSSCTTEEEEE-E----------------------SEEE
T ss_pred -cceeEEEEeccCCc--EEecccccCCCccee------eEecCCCCCEEEEE-c----------------------CeEE
Confidence 11234446666542 1211 1111111111 67899 99987765 1 1599
Q ss_pred EEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002164 556 LFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (958)
Q Consensus 556 ~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~ 622 (958)
+||+++++.......... + ...+|++||+.+++.. ....++++++.+++..
T Consensus 279 ~~d~~~~~~~~~~~~~~~-----~-------~~~~~s~dg~~l~~~~----~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 279 KYDLKQRKLIKAANLDHT-----Y-------YCVAFDKKGDKLYLGG----TFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEETTTTEEEEEEECSSC-----C-------CEEEECSSSSCEEEES----BSSEEEEEETTTTEEE
T ss_pred EEECccCeEEEEEcCCCC-----c-------cceEECCCCCEEEEec----CCCeEEEEecccccee
Confidence 999999887655543321 1 1357899999887732 2267999998887643
No 317
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.43 E-value=1.4e-12 Score=137.07 Aligned_cols=209 Identities=16% Similarity=0.115 Sum_probs=126.9
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEG 727 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G 727 (958)
+|.+++...+-+++ .|+||++||.+.... .|. .....| +++|.|++ .|.+|+|
T Consensus 7 ~g~~l~~~~~g~~~--------~~~vv~lHG~~~~~~-----------~~~----~~~~~L-~~~~~v~~---~D~~G~G 59 (264)
T 3ibt_A 7 NGTLMTYSESGDPH--------APTLFLLSGWCQDHR-----------LFK----NLAPLL-ARDFHVIC---PDWRGHD 59 (264)
T ss_dssp TTEECCEEEESCSS--------SCEEEEECCTTCCGG-----------GGT----THHHHH-TTTSEEEE---ECCTTCS
T ss_pred CCeEEEEEEeCCCC--------CCeEEEEcCCCCcHh-----------HHH----HHHHHH-HhcCcEEE---EccccCC
Confidence 77787766654321 578999999643211 111 234455 45699999 5666788
Q ss_pred Ccccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEeccCCCCCCCCC---
Q 002164 728 DEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTLTPF--- 801 (958)
Q Consensus 728 ~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~~~~--- 801 (958)
.+... ........+|+.++++.+ +.+++.++|||+||.+++.+|.++ |++++++|++++... ....+
T Consensus 60 ~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~-~~~~~~~~ 132 (264)
T 3ibt_A 60 AKQTDSGDFDSQTLAQDLLAFIDAK------GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQ-PHPGFWQQ 132 (264)
T ss_dssp TTCCCCSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSS-CCHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCC-cChhhcch
Confidence 77542 223456677777666653 335899999999999999999999 999999999987651 10000
Q ss_pred --------Ccc------------cccc-h----h-----hhcHHHHH------------hcCcccccCCCCCCEEEEeeC
Q 002164 802 --------GFQ------------NEDR-T----L-----WEATSTYV------------EMSPFMSANKLKKPILLVHGE 839 (958)
Q Consensus 802 --------~~~------------~~~~-~----~-----~~~~~~~~------------~~sp~~~~~~~~~P~Lii~G~ 839 (958)
.+. .... . . ......+. ..++...+.++++|+|++||.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~ 212 (264)
T 3ibt_A 133 LAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIY 212 (264)
T ss_dssp HHHTTCTTTHHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEE
T ss_pred hhcccChhhHHHHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEec
Confidence 000 0000 0 0 00000000 011225567889999999875
Q ss_pred CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 840 EDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 840 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
.|...+..+....++.+.+ ...++++++++||... .++...+.+.+.+||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 213 SQPLSQDYRQLQLEFAAGH----SWFHPRHIPGRTHFPS-LENPVAVAQAIREFLQ 263 (264)
T ss_dssp CCSCCHHHHHHHHHHHHHC----TTEEEEECCCSSSCHH-HHCHHHHHHHHHHHTC
T ss_pred CCccchhhHHHHHHHHHhC----CCceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 5544321133334443332 3479999999999863 4566777777888764
No 318
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.43 E-value=2.7e-11 Score=136.11 Aligned_cols=298 Identities=12% Similarity=0.032 Sum_probs=175.5
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeecc----
Q 002164 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQG---- 184 (958)
Q Consensus 110 ~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~---- 184 (958)
.+..++||| ||++|+....+ +.|.+|++.... .........
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~d---------------------------------g~i~iw~~~~~~-~~~~~~~~~~~~~ 90 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSD---------------------------------GVIVLYDLENSS-RQSYYTCKAVCSI 90 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETT---------------------------------SCEEEEECCCCS-SSSCEEECEEEEE
T ss_pred cEEEEEEecCCCCEEEEEcCC---------------------------------CeEEEEECCCCc-ccceEeccccccc
Confidence 566889999 99999988765 478999985421 111111000
Q ss_pred -----CCCCCcccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecC---C
Q 002164 185 -----FPDGAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN---S 255 (958)
Q Consensus 185 -----~~~~~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspD---G 255 (958)
......+....|+| +++.|+... ....|.+|++.+++.......... +..+.|+|+ +
T Consensus 91 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 156 (408)
T 4a11_B 91 GRDHPDVHRYSVETVQWYPHDTGMFTSSS---------FDKTLKVWDTNTLQTADVFNFEET-----VYSHHMSPVSTKH 156 (408)
T ss_dssp CTTCTTCCSSCEEEEEECTTCTTCEEEEE---------TTSEEEEEETTTTEEEEEEECSSC-----EEEEEECSSCSSC
T ss_pred cccccccCCCcEEEEEEccCCCcEEEEEe---------CCCeEEEeeCCCCccceeccCCCc-----eeeeEeecCCCCC
Confidence 01234788999999 666666644 256899999998887666544332 567788874 4
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCCC-c
Q 002164 256 TLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP-A 332 (958)
Q Consensus 256 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~~-~ 332 (958)
..|+... ....|.++++ +++ ...+... .
T Consensus 157 ~~~~~~~-------------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~ 187 (408)
T 4a11_B 157 CLVAVGT-------------------------------------------------RGPKVQLCDLKSGSCSHILQGHRQ 187 (408)
T ss_dssp CEEEEEE-------------------------------------------------SSSSEEEEESSSSCCCEEECCCCS
T ss_pred cEEEEEc-------------------------------------------------CCCeEEEEeCCCcceeeeecCCCC
Confidence 4777651 2345788888 664 3444444 6
Q ss_pred cccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCce--EEEeccCCccc--cCcccccccccCcceeeeec
Q 002164 333 VYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAE--DIPIAFNSVRKGMRSINWRS 408 (958)
Q Consensus 333 ~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~--~~~l~~~~~~~--~~p~~~~~~~~~~~~~~~sp 408 (958)
.+..++|+|||++++++... ++.+.+||+..+. ...+....... ............+..+.|+|
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASA------------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp CEEEEEECSSCTTEEEEEET------------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cEEEEEECCCCCcEEEEEcC------------CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 78899999999975555433 3489999997543 22221111100 00111122334567899999
Q ss_pred CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCce-EEEee----ccccCceee-ecCCceEEEEEeccccceE
Q 002164 409 DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE-ILHKL----DLRYGGISW-CDDSLALVYESWYKTRRTR 482 (958)
Q Consensus 409 DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~-~l~~~----~~~~~~~~~-spDg~~l~~~~~~~~~~~~ 482 (958)
||+.++.. +..+.|.+|++ ..++.. ..... ........+ ...+..+++....+ .
T Consensus 256 ~~~~l~~~-------------~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 315 (408)
T 4a11_B 256 DGLHLLTV-------------GTDNRMRLWNS---SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS----T 315 (408)
T ss_dssp TSSEEEEE-------------ETTSCEEEEET---TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT----E
T ss_pred CCCEEEEe-------------cCCCeEEEEEC---CCCccceeccccccccccccceeEEecCCCceEEEEecCC----E
Confidence 99988763 44567899996 333321 11111 111111222 23345566654432 4
Q ss_pred EEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCC
Q 002164 483 TWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (958)
Q Consensus 483 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g 562 (958)
|.++++.++ +...........+.. +.|+|||++|+....+ ..|.+||++++
T Consensus 316 i~v~d~~~~--~~~~~~~~~~~~v~~------~~~s~~~~~l~s~~~d---------------------g~i~iw~~~~~ 366 (408)
T 4a11_B 316 IAVYTVYSG--EQITMLKGHYKTVDC------CVFQSNFQELYSGSRD---------------------CNILAWVPSLY 366 (408)
T ss_dssp EEEEETTTC--CEEEEECCCSSCEEE------EEEETTTTEEEEEETT---------------------SCEEEEEECC-
T ss_pred EEEEECcCC--cceeeeccCCCeEEE------EEEcCCCCEEEEECCC---------------------CeEEEEeCCCC
Confidence 666777664 334444444444443 7899999998877521 25999999877
Q ss_pred ceE
Q 002164 563 SKE 565 (958)
Q Consensus 563 ~~~ 565 (958)
+..
T Consensus 367 ~~~ 369 (408)
T 4a11_B 367 EPV 369 (408)
T ss_dssp ---
T ss_pred Ccc
Confidence 643
No 319
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.41 E-value=3.6e-11 Score=129.60 Aligned_cols=274 Identities=9% Similarity=0.065 Sum_probs=169.1
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCc-eeeeccCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQ-EIEIQGFPDG 188 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~-~~~lt~~~~~ 188 (958)
.+..++| |||++|+....+ +.|.+|++.. +. ...+.. ..
T Consensus 20 ~v~~~~~-~~~~~l~s~~~d---------------------------------g~v~vw~~~~----~~~~~~~~~--~~ 59 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRD---------------------------------GTVRLWSKDD----QWLGTVVYT--GQ 59 (313)
T ss_dssp CEEEEEE-EETTEEEEEETT---------------------------------SEEEEEEESS----SEEEEEEEE--CS
T ss_pred CcEEEEe-cCCCEEEEEEcC---------------------------------CcEEEEECCC----CEEEEEeec--CC
Confidence 4667888 999999888765 4789999854 32 333333 23
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc----eeeccCCCCccccccccceEEecCCeEEEEEecC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----ARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL 264 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~----~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~ 264 (958)
..+....|+|||+.|+.... ...|.+|++.... ...+.. ... .+..+.| +++.|+...
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~---------dg~i~~~~~~~~~~~~~~~~~~~-~~~----~i~~~~~--~~~~l~~~~-- 121 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGK---------DTMINGVPLFATSGEDPLYTLIG-HQG----NVCSLSF--QDGVVISGS-- 121 (313)
T ss_dssp SCEEEEEEETTTTEEEEEET---------TSCEEEEETTCCTTSCC-CEECC-CSS----CEEEEEE--ETTEEEEEE--
T ss_pred ccEEEEEECCCCCEEEEecC---------CCeEEEEEeeecCCCCcccchhh-ccc----CEEEEEe--cCCEEEEEe--
Confidence 47889999999999988652 4567777766532 122211 111 2556777 566676551
Q ss_pred CCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCCC-ccccccccCC-C
Q 002164 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSP-D 342 (958)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~Sp-D 342 (958)
....|.+++.......+... ..+....|+| +
T Consensus 122 -----------------------------------------------~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~ 154 (313)
T 3odt_A 122 -----------------------------------------------WDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFS 154 (313)
T ss_dssp -----------------------------------------------TTSEEEEEETTEEEEEEECCSSCEEEEEEEETT
T ss_pred -----------------------------------------------CCCCEEEEcCCcEEEecccCCCceeEEEEccCC
Confidence 12345555632233333333 6677788888 8
Q ss_pred CcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccC
Q 002164 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDG 422 (958)
Q Consensus 343 Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~ 422 (958)
++.|+..+.+ +.+.+||.. ...+.+... ....+..+.|+|+|+ ++..
T Consensus 155 ~~~l~~~~~d-------------~~i~i~d~~-~~~~~~~~~------------~~~~i~~~~~~~~~~-~~~~------ 201 (313)
T 3odt_A 155 ENKFLTASAD-------------KTIKLWQND-KVIKTFSGI------------HNDVVRHLAVVDDGH-FISC------ 201 (313)
T ss_dssp TTEEEEEETT-------------SCEEEEETT-EEEEEECSS------------CSSCEEEEEEEETTE-EEEE------
T ss_pred CCEEEEEECC-------------CCEEEEecC-ceEEEEecc------------CcccEEEEEEcCCCe-EEEc------
Confidence 9988877633 489999933 222332220 113457899999998 4432
Q ss_pred CCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccC
Q 002164 423 GDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (958)
Q Consensus 423 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 502 (958)
+..+.|++|++ ..+.....+......+..+.|+|+| .|+.... + ..|+++++..+ +........
T Consensus 202 -------~~dg~i~i~d~--~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~-d---g~v~iwd~~~~--~~~~~~~~~ 265 (313)
T 3odt_A 202 -------SNDGLIKLVDM--HTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGE-D---RTVRIWSKENG--SLKQVITLP 265 (313)
T ss_dssp -------ETTSEEEEEET--TTCCEEEEEECCSSCEEEEEECTTS-CEEEEET-T---SEEEEECTTTC--CEEEEEECS
T ss_pred -------cCCCeEEEEEC--CchhhhhhhhcCCceEEEEEEecCC-CEEEEec-C---CEEEEEECCCC--ceeEEEecc
Confidence 44567999996 2344444555566778889999999 4554433 2 34777787774 334444444
Q ss_pred CccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceE
Q 002164 503 SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (958)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~ 565 (958)
...+.. +.|+|||+.++ ... ...|++||+++++..
T Consensus 266 ~~~i~~------~~~~~~~~~~~-~~~---------------------dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 266 AISIWS------VDCMSNGDIIV-GSS---------------------DNLVRIFSQEKSRWA 300 (313)
T ss_dssp SSCEEE------EEECTTSCEEE-EET---------------------TSCEEEEESCGGGCC
T ss_pred CceEEE------EEEccCCCEEE-EeC---------------------CCcEEEEeCCCCcee
Confidence 333333 78999998443 331 125999999876543
No 320
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.41 E-value=2.2e-11 Score=134.99 Aligned_cols=262 Identities=9% Similarity=-0.020 Sum_probs=141.0
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
....++|||||++|+....+ .+.+|++..+| ....+...+.++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~----------------------------------~v~~~~~~~~g---~~~~~~~~~~~g 83 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK----------------------------------KWSSFAVKSPT---EIVHEASHPIGG 83 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT----------------------------------EEEEEEEEETT---EEEEEEEEECCS
T ss_pred CCcEEEECCCCCEEEEEccc----------------------------------eEEEEEECCCC---CEEEeeEeecCC
Confidence 45678999999988655542 46778774223 322222111112
Q ss_pred cccceeecCCCCeE-EEEEeecccc-CCC----CCceEEEEEcC-CCcee-eccC---CCCccccccccceEEecCCeEE
Q 002164 190 KLNFVTWSQDGKHL-AFSIRIDAED-SSS----SKLRVWVADVD-TGKAR-PLFQ---SPDIYLNAIFDNFVWVNNSTLL 258 (958)
Q Consensus 190 ~~~~~~wSPDG~~i-af~~~~~~~~-~~~----~~~~l~~~~~~-~g~~~-~lt~---~~~~~~~~~~~~~~wspDG~~l 258 (958)
....++|||||++| +++.+..... ..+ ....+.+++++ .|+.. .+.. ..... +..++|+|||++|
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~spdG~~l 159 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTG----IHGMVFDPTETYL 159 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCC----EEEEEECTTSSEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCc----ceEEEECCCCCEE
Confidence 35668999999973 4543200000 000 13345666654 34433 2221 01111 5689999999988
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc--CCeeeec---C--C-
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEI---G--P- 330 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~~l---~--~- 330 (958)
+++.. +...|+++++ +|+...+ . .
T Consensus 160 ~~~~~------------------------------------------------~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 160 YSADL------------------------------------------------TANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp EEEET------------------------------------------------TTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred EEEcC------------------------------------------------CCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 76510 1235777776 3654322 1 1
Q ss_pred CccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc--CceEE----EeccCCccccCccccccccc-----
Q 002164 331 PAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD--GIFVR----ELCDLPLAEDIPIAFNSVRK----- 399 (958)
Q Consensus 331 ~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~--~~~~~----~l~~~~~~~~~p~~~~~~~~----- 399 (958)
+.....++|||||++|++.... .+.+.+|+++ ++... .+...+.. +.+...
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~------------~~~v~v~~~~~~~g~~~~~~~~~~~~~~~------~~g~~~~~~~~ 253 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEA------------GNRICEYVIDPATHMPVYTHHSFPLIPPG------IPDRDPETGKG 253 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTTCCEEEEEEEEESSCTT------CCCBCTTTSSB
T ss_pred CCCCCEeEECCCCCEEEEEECC------------CCeEEEEEEeCCCCcEEEccceEEcCCCC------cCCcccccccc
Confidence 2446778999999999887632 2377777665 34322 23222211 000000
Q ss_pred -Ccceee-eecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE---e-eccccCceeeec---CCceE
Q 002164 400 -GMRSIN-WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH---K-LDLRYGGISWCD---DSLAL 470 (958)
Q Consensus 400 -~~~~~~-~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~---~-~~~~~~~~~~sp---Dg~~l 470 (958)
.+..+. |||||+.|+.. +...+. ...+.|.+|+++ ..++.+.+. . .......++||| ||++|
T Consensus 254 ~~~~~i~~~spdG~~l~v~-~~~~~~------~~~~~i~v~~~~--~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 254 LYRADVCALTFSGKYMFAS-SRANKF------ELQGYIAGFKLR--DCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp SEEEEEEEECTTSSEEEEE-EEESST------TSCCEEEEEEEC--TTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred cccccEEEECCCCCEEEEE-CCCCCC------CCCCeEEEEEEC--CCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 245789 99999988653 221100 012267777752 234554422 1 223456789999 89998
Q ss_pred EEEEeccccceEEEEEcC
Q 002164 471 VYESWYKTRRTRTWVISP 488 (958)
Q Consensus 471 ~~~~~~~~~~~~l~~~~~ 488 (958)
+++...+ +...+|.++.
T Consensus 325 ~v~~~~~-~~v~v~~~~~ 341 (365)
T 1jof_A 325 AITDDQE-GWLEIYRWKD 341 (365)
T ss_dssp EEECSSS-CEEEEEEEET
T ss_pred EEEEcCC-CeEEEEEEch
Confidence 8764432 2356666654
No 321
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.40 E-value=3.3e-12 Score=136.24 Aligned_cols=214 Identities=14% Similarity=0.085 Sum_probs=127.7
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCC-cCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPR-IGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
+|.+++...+-++. ...|+||++||.+..... .|.. +....+..|+ ++|.|++ .+.+|+
T Consensus 19 ~~~~l~y~~~G~~~------~~~p~vvllHG~~~~~~~----------~~~~~~~~~~~~~L~-~~~~vi~---~D~~G~ 78 (286)
T 2qmq_A 19 PYGSVTFTVYGTPK------PKRPAIFTYHDVGLNYKS----------CFQPLFRFGDMQEII-QNFVRVH---VDAPGM 78 (286)
T ss_dssp TTEEEEEEEESCCC------TTCCEEEEECCTTCCHHH----------HHHHHHTSHHHHHHH-TTSCEEE---EECTTT
T ss_pred CCeEEEEEeccCCC------CCCCeEEEeCCCCCCchh----------hhhhhhhhchhHHHh-cCCCEEE---ecCCCC
Confidence 78888877664321 125889999996421100 0000 0001233444 4799999 455566
Q ss_pred CCccc--chh----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC
Q 002164 727 GDEEA--NDR----FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP 800 (958)
Q Consensus 727 G~~~~--~~~----~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~ 800 (958)
|.+.. ... ......+|+.++++.+ +.+++.|+|||+||.+++.++.++|++++++|++++........
T Consensus 79 G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 152 (286)
T 2qmq_A 79 EEGAPVFPLGYQYPSLDQLADMIPCILQYL------NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM 152 (286)
T ss_dssp STTCCCCCTTCCCCCHHHHHHTHHHHHHHH------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH
T ss_pred CCCCCCCCCCCCccCHHHHHHHHHHHHHHh------CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh
Confidence 55422 222 3566677777777665 23589999999999999999999999999999999864321100
Q ss_pred -C----------C---------ccccc----chhhhc-------------HHHHH----hcCc----ccccCCCCCCEEE
Q 002164 801 -F----------G---------FQNED----RTLWEA-------------TSTYV----EMSP----FMSANKLKKPILL 835 (958)
Q Consensus 801 -~----------~---------~~~~~----~~~~~~-------------~~~~~----~~sp----~~~~~~~~~P~Li 835 (958)
+ . +.... ....+. ...+. .... ...+.++++|+|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 232 (286)
T 2qmq_A 153 DWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVML 232 (286)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEE
T ss_pred hhhhhhhccccccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEE
Confidence 0 0 00000 000000 00000 0011 1245678899999
Q ss_pred EeeCCCCCCCCChHHHHHHHHHHHhCCC-cEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 836 VHGEEDNNSGTLTMQSDRFFNALKGHGA-LCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 836 i~G~~D~~v~~~~~~~~~~~~~l~~~g~-~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
++|++|..+| .. .+.++.... .+++++++++||.+. .++...+.+.+.+||.
T Consensus 233 i~G~~D~~~~---~~----~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 233 VVGDQAPHED---AV----VECNSKLDPTQTSFLKMADSGGQPQ-LTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp EEETTSTTHH---HH----HHHHHHSCGGGEEEEEETTCTTCHH-HHCHHHHHHHHHHHHC
T ss_pred EecCCCcccc---HH----HHHHHHhcCCCceEEEeCCCCCccc-ccChHHHHHHHHHHhc
Confidence 9999998864 22 233333333 589999999999874 4556777788888874
No 322
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.40 E-value=7.4e-11 Score=140.58 Aligned_cols=285 Identities=8% Similarity=0.050 Sum_probs=174.4
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCC----ce-eeccCCCCcccccc-ccceEEec--CCeEEEE
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG----KA-RPLFQSPDIYLNAI-FDNFVWVN--NSTLLVC 260 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g----~~-~~lt~~~~~~~~~~-~~~~~wsp--DG~~l~~ 260 (958)
..+...+|||||++|++.. ...|.+|+++++ +. ..+..... . +..++|+| ||++|+.
T Consensus 19 ~~v~~~~~spdg~~l~~~~----------~~~v~v~~~~~~~~~~~~~~~~~~h~~-----~~v~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC----------GKSAFVRCLDDGDSKVPPVVQFTGHGS-----SVVTTVKFSPIKGSQYLCS 83 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE----------TTEEEEEECCSSCCSSCSEEEECTTTT-----SCEEEEEECSSTTCCEEEE
T ss_pred CceeEEEECCCCCEEEEec----------CCeEEEEECCCCCCccccceEEecCCC-----ceEEEEEECcCCCCCEEEE
Confidence 4688899999999999965 347899999877 44 33332222 2 56899999 9999997
Q ss_pred EecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC------e---eeecCC
Q 002164 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG------T---VKEIGP 330 (958)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g------~---~~~l~~ 330 (958)
.. ....|.++++ +| + ...+..
T Consensus 84 ~~-------------------------------------------------~dg~v~vw~~~~~~~~~~~~~~~~~~~~~ 114 (615)
T 1pgu_A 84 GD-------------------------------------------------ESGKVIVWGWTFDKESNSVEVNVKSEFQV 114 (615)
T ss_dssp EE-------------------------------------------------TTSEEEEEEEEEEGGGTEEEEEEEEEEEC
T ss_pred ec-------------------------------------------------CCCEEEEEeCCCCcccccccccccchhhc
Confidence 62 1133555555 44 2 222322
Q ss_pred C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecC
Q 002164 331 P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSD 409 (958)
Q Consensus 331 ~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spD 409 (958)
. ..+..++|||||++|+....... ..+.+++|+ .++....+..+ ...+..+.|+||
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~---------~~~~v~~~d-~~~~~~~~~~~-------------~~~v~~~~~~~~ 171 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRD---------NFGVFISWD-SGNSLGEVSGH-------------SQRINACHLKQS 171 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSS---------CSEEEEETT-TCCEEEECCSC-------------SSCEEEEEECSS
T ss_pred ccccEEEEEEeCCCCEEEEeccCCC---------CccEEEEEE-CCCcceeeecC-------------CccEEEEEECCC
Confidence 3 67889999999999998874421 124788887 33333333322 134578999999
Q ss_pred CCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeecc---ccCceeeecC-CceEEEEEeccccceEEEE
Q 002164 410 KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL---RYGGISWCDD-SLALVYESWYKTRRTRTWV 485 (958)
Q Consensus 410 G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~---~~~~~~~spD-g~~l~~~~~~~~~~~~l~~ 485 (958)
|+.+++. .+..+.+.+|+. ..+.....+..... .+..+.|+|| |+.|+.....+ .|++
T Consensus 172 ~~~~l~~------------~~~d~~v~vwd~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~v 233 (615)
T 1pgu_A 172 RPMRSMT------------VGDDGSVVFYQG--PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR----KISC 233 (615)
T ss_dssp SSCEEEE------------EETTTEEEEEET--TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC----CEEE
T ss_pred CCcEEEE------------EeCCCcEEEEeC--CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC----eEEE
Confidence 9865543 134567899995 22222333344444 6778999999 98888775433 3666
Q ss_pred EcCCCCCCCcEEEe-c---cCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCC
Q 002164 486 ISPGSKDVAPRILF-D---RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (958)
Q Consensus 486 ~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~ 561 (958)
+++..+ +..... . .....+.. +.|+ +|++|+....+ ..|.+||+.+
T Consensus 234 wd~~~~--~~~~~~~~~~~~~~~~v~~------~~~~-~~~~l~~~~~d---------------------~~i~~wd~~~ 283 (615)
T 1pgu_A 234 FDGKSG--EFLKYIEDDQEPVQGGIFA------LSWL-DSQKFATVGAD---------------------ATIRVWDVTT 283 (615)
T ss_dssp EETTTC--CEEEECCBTTBCCCSCEEE------EEES-SSSEEEEEETT---------------------SEEEEEETTT
T ss_pred EECCCC--CEeEEecccccccCCceEE------EEEc-CCCEEEEEcCC---------------------CcEEEEECCC
Confidence 666654 223333 2 23333333 7889 99988877521 2599999998
Q ss_pred CceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002164 562 GSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (958)
Q Consensus 562 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~ 620 (958)
++.................. ..++ +++.++.... ...++++++.+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~l~~~~~----~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 284 SKCVQKWTLDKQQLGNQQVG-------VVAT-GNGRIISLSL----DGTLNFYELGHDE 330 (615)
T ss_dssp TEEEEEEECCTTCGGGCEEE-------EEEE-ETTEEEEEET----TSCEEEEETTEEE
T ss_pred CcEEEEEcCCCCcccCceeE-------EEeC-CCCeEEEEEC----CCCEEEEECCCCc
Confidence 87665554431100011111 2233 6666654443 2457888876654
No 323
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1e-12 Score=148.21 Aligned_cols=233 Identities=9% Similarity=0.040 Sum_probs=137.8
Q ss_pred CCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCC-
Q 002164 109 PPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD- 187 (958)
Q Consensus 109 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~- 187 (958)
+.+..++|||||++||..+.+ +.+.+|+.. +....+. ...
T Consensus 86 ~~V~~vawSPdG~~LAs~s~d---------------------------------g~V~iwd~~-----~~l~~l~-~~~~ 126 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNN---------------------------------GNVSVFKDN-----KMLTNLD-SKGN 126 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETT---------------------------------SCEEEEETT-----EEEEECC-CSSC
T ss_pred CcEEEEEECCCCCEEEEEeCC---------------------------------CcEEEEeCC-----ceeeecc-CCCc
Confidence 456678888888888877765 578899852 1111121 110
Q ss_pred --CCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCce--------eeccCCCCccccccccceEEecCCeE
Q 002164 188 --GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--------RPLFQSPDIYLNAIFDNFVWVNNSTL 257 (958)
Q Consensus 188 --~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~lt~~~~~~~~~~~~~~~wspDG~~ 257 (958)
...+...+|||||+.||.... ...|.+|++.++.. ..+.....+ ....+..++||||| .
T Consensus 127 ~~~~sv~svafSPDG~~LAsgs~---------DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg-L 195 (588)
T 2j04_A 127 LSSRTYHCFEWNPIESSIVVGNE---------DGELQFFSIRKNSENTPEFYFESSIRLSDAG-SKDWVTHIVWYEDV-L 195 (588)
T ss_dssp STTTCEEEEEECSSSSCEEEEET---------TSEEEEEECCCCTTTCCCCEEEEEEECSCTT-CCCCEEEEEEETTE-E
T ss_pred cccccEEEEEEcCCCCEEEEEcC---------CCEEEEEECCCCccccccceeeeeeeccccc-ccccEEEEEEcCCc-E
Confidence 114788999999999999653 66788889888753 222111110 11127799999999 4
Q ss_pred EEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee----eecC-CC
Q 002164 258 LVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV----KEIG-PP 331 (958)
Q Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~----~~l~-~~ 331 (958)
++.. ....++++++ ++.. +.+. ..
T Consensus 196 aass--------------------------------------------------~D~tVrlWd~~~~~~~~~~~tL~~~h 225 (588)
T 2j04_A 196 VAAL--------------------------------------------------SNNSVFSMTVSASSHQPVSRMIQNAS 225 (588)
T ss_dssp EEEE--------------------------------------------------TTCCEEEECCCSSSSCCCEEEEECCC
T ss_pred EEEe--------------------------------------------------CCCeEEEEECCCCccccceeeecccc
Confidence 4433 1234667777 4442 2342 23
Q ss_pred -ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeee--ec
Q 002164 332 -AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINW--RS 408 (958)
Q Consensus 332 -~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~--sp 408 (958)
..+..++|| |+.|+.+.. +.|.+|+++++....+... ....+.++.| ||
T Consensus 226 ~~~V~svaFs--g~~LASa~~--------------~tIkLWd~~~~~~~~~~~g------------h~~~V~~va~~~s~ 277 (588)
T 2j04_A 226 RRKITDLKIV--DYKVVLTCP--------------GYVHKIDLKNYSISSLKTG------------SLENFHIIPLNHEK 277 (588)
T ss_dssp SSCCCCEEEE--TTEEEEECS--------------SEEEEEETTTTEEEEEECS------------CCSCCCEEEETTCS
T ss_pred cCcEEEEEEE--CCEEEEEeC--------------CeEEEEECCCCeEEEEEcC------------CCceEEEEEeeeCC
Confidence 678899999 688887752 3899999998877544321 1134567888 88
Q ss_pred CCCCceEEEEeccCC------------CcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEe
Q 002164 409 DKPSTLYWAETQDGG------------DAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESW 475 (958)
Q Consensus 409 DG~~l~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~ 475 (958)
||+.|+... .+|. +..........+++|+. .++....+.. ...+.+++|||||+.|+....
T Consensus 278 d~~~La~a~--edG~klw~~d~~~~spd~~l~a~~d~~v~lW~~---~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 278 ESTILLMSN--KTSYKVLLEDELHVTADNIIAPYLEKKFKKWST---IWNEFNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SCEEEEECS--SCEEEEEESSSEEEECCCSSHHHHHHHHHHTTT---TTTSSSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred CCCEEEEEc--CCCCEEEeeccEEECCCceEEEEcCCEEEEEEC---CCCceeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 887666531 1111 00000011223444442 3333332222 444677899999999887653
No 324
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.39 E-value=3.6e-11 Score=135.17 Aligned_cols=291 Identities=11% Similarity=0.027 Sum_probs=165.9
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCC-ce---eeccCCCCccccccccceEEec-CCeEEEEEecCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-KA---RPLFQSPDIYLNAIFDNFVWVN-NSTLLVCTIPLL 265 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g-~~---~~lt~~~~~~~~~~~~~~~wsp-DG~~l~~~~~~~ 265 (958)
....+++|+...+++. ..+...|.+|++... +. ........ ..+..++|+| |++.|+...
T Consensus 37 ~~~~~~~~~~~~~~~~--------~~~~g~i~v~~~~~~~~~~~~~~~~~~h~----~~V~~~~~~p~~~~~l~s~s--- 101 (402)
T 2aq5_A 37 SGFCAVNPKFMALICE--------ASGGGAFLVLPLGKTGRVDKNVPLVCGHT----APVLDIAWCPHNDNVIASGS--- 101 (402)
T ss_dssp SCSEEECSSEEEEEBC--------CSSSCCEEEEETTCCEECCTTCCCBCCCS----SCEEEEEECTTCTTEEEEEE---
T ss_pred CCcEEECCCeEEEEEE--------EcCCCEEEEEECccCCCCCCCCceEecCC----CCEEEEEeCCCCCCEEEEEe---
Confidence 3457788766544442 234668888887543 21 11111112 2277999999 888888762
Q ss_pred CCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--------eeecCCC-cccc
Q 002164 266 RGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--------VKEIGPP-AVYT 335 (958)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--------~~~l~~~-~~~~ 335 (958)
....|.++++ ++. ...+... ..+.
T Consensus 102 ----------------------------------------------~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~ 135 (402)
T 2aq5_A 102 ----------------------------------------------EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG 135 (402)
T ss_dssp ----------------------------------------------TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE
T ss_pred ----------------------------------------------CCCeEEEEEccCCCCccccCCceEEecCCCCeEE
Confidence 1234666676 442 3334434 6788
Q ss_pred ccccCCCCc-EEEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcccccccccCcceeeeecCCCCc
Q 002164 336 SLDPSPDEK-YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (958)
Q Consensus 336 ~~~~SpDGk-~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l 413 (958)
.++|+|||+ .|+..+ . ++.|.+||+.+++.. .+.. . .....+..+.|+|||+.|
T Consensus 136 ~~~~~p~~~~~l~s~~-~------------dg~i~iwd~~~~~~~~~~~~-~----------~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 136 IVAWHPTAQNVLLSAG-C------------DNVILVWDVGTGAAVLTLGP-D----------VHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp EEEECSSBTTEEEEEE-T------------TSCEEEEETTTTEEEEEECT-T----------TCCSCEEEEEECTTSSCE
T ss_pred EEEECcCCCCEEEEEc-C------------CCEEEEEECCCCCccEEEec-C----------CCCCceEEEEECCCCCEE
Confidence 999999996 555444 2 348999999866543 3310 0 111345789999999988
Q ss_pred eEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEE-Eeecc-ccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 414 LYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL-HKLDL-RYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l-~~~~~-~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
+.. +..+.|++||+ ..+.....+ ..... .+..+.|+|||+.|+...... ....|.++++...
T Consensus 192 ~~~-------------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~-~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 192 CTS-------------CRDKRVRVIEP--RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM-SERQVALWDTKHL 255 (402)
T ss_dssp EEE-------------ETTSEEEEEET--TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT-CCEEEEEEETTBC
T ss_pred EEE-------------ecCCcEEEEeC--CCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC-CCceEEEEcCccc
Confidence 773 44668999996 233223333 22222 257789999998777663211 1245777777764
Q ss_pred CCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc--eEEEec
Q 002164 492 DVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS--KERIWE 569 (958)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~--~~~l~~ 569 (958)
..............+.. +.|+|||+.|+..... ...|.+||+.+++ ...+..
T Consensus 256 ~~~~~~~~~~~~~~v~~------~~~s~~~~~l~~~g~~--------------------dg~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 256 EEPLSLQELDTSSGVLL------PFFDPDTNIVYLCGKG--------------------DSSIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp SSCSEEEECCCCSSCEE------EEEETTTTEEEEEETT--------------------CSCEEEEEECSSTTCEEEEEE
T ss_pred cCCceEEeccCCCceeE------EEEcCCCCEEEEEEcC--------------------CCeEEEEEecCCCcceEeecc
Confidence 22112221111122222 7899999988765411 1258999998877 444432
Q ss_pred CCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEe
Q 002164 570 SDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQI 624 (958)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~L 624 (958)
.... ......+|+||+..++. ....+.++++.+++.+.+
T Consensus 310 ~~~~----------~~v~~~~~sp~~~~~~s------~~~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 310 FSSK----------ESQRGMGYMPKRGLEVN------KCEIARFYKLHERKCEPI 348 (402)
T ss_dssp ECCS----------SCCSEEEECCGGGSCGG------GTEEEEEEEEETTEEEEE
T ss_pred cccC----------CcccceEEeccccccee------cceeEEEEEcCCCcEEEE
Confidence 2110 11123567787765431 112455666666655544
No 325
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.39 E-value=1.8e-13 Score=156.20 Aligned_cols=211 Identities=17% Similarity=0.061 Sum_probs=135.4
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCC-cEEEEcCCC-CCCCCCC
Q 002164 651 QLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG-FAILGGPTT-PIIGEGD 728 (958)
Q Consensus 651 ~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G-~~vl~~~~~-~~~G~G~ 728 (958)
-+...+|.|+.. . .++|+||++|||++..+.... +. .....|+++| ++|+.++|+ +..|++.
T Consensus 82 cL~l~v~~P~~~--~--~~~PviV~iHGGg~~~g~~~~--------~~----~~~~~la~~g~~vvv~~nYRlg~~Gf~~ 145 (489)
T 1qe3_A 82 CLYVNVFAPDTP--S--QNLPVMVWIHGGAFYLGAGSE--------PL----YDGSKLAAQGEVIVVTLNYRLGPFGFLH 145 (489)
T ss_dssp CCEEEEEEECSS--C--CSEEEEEEECCSTTTSCCTTS--------GG----GCCHHHHHHHTCEEEEECCCCHHHHSCC
T ss_pred CCEEEEEeCCCC--C--CCCCEEEEECCCccccCCCCC--------cc----cCHHHHHhcCCEEEEecCccCcccccCc
Confidence 356678889752 1 238999999999765433211 10 1134667765 999998887 3334433
Q ss_pred ccc--chhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEeccCCCCCCCCC
Q 002164 729 EEA--NDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYNRTLTPF 801 (958)
Q Consensus 729 ~~~--~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~~~~~~~~ 801 (958)
... ........+.|+.++++|+.++- .+|++||+|+|+|+||++++.++... +++|+++|+.+|..++.....
T Consensus 146 ~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~ 225 (489)
T 1qe3_A 146 LSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQ 225 (489)
T ss_dssp CTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHH
T ss_pred cccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHH
Confidence 211 11223456789999999998862 36999999999999999999887753 578999999999763211000
Q ss_pred C------cccccchhhhcHHHH---------HhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEE
Q 002164 802 G------FQNEDRTLWEATSTY---------VEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCR 866 (958)
Q Consensus 802 ~------~~~~~~~~~~~~~~~---------~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 866 (958)
. +....+-..+..+.+ ...+++........|.+++++..|..+. +.+..+++++.+..++++.
T Consensus 226 ~~~~~~~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~--~~~~~~~~~~~~~~~vp~~ 303 (489)
T 1qe3_A 226 AASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTL--PEEPEKSIAEGAASGIPLL 303 (489)
T ss_dssp HHHHHHHHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTB--CSCHHHHHHTTTTTTCCEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeec--CcCHHHHHhcCCCCCCCEE
Confidence 0 000000000011111 1111111111234567889999999987 8899999998888899999
Q ss_pred EEEeCCCCccCCC
Q 002164 867 LVILPFESHGYAA 879 (958)
Q Consensus 867 ~~~~p~~~H~~~~ 879 (958)
+-..++++|.+..
T Consensus 304 ~g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 304 IGTTRDEGYLFFT 316 (489)
T ss_dssp EEEETTGGGGTCC
T ss_pred EeeecchhHhhcc
Confidence 9999999998753
No 326
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.38 E-value=3.7e-13 Score=143.28 Aligned_cols=192 Identities=14% Similarity=-0.011 Sum_probs=111.8
Q ss_pred eEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHHHH
Q 002164 671 PCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAAVE 748 (958)
Q Consensus 671 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~av~ 748 (958)
|.||++||..... ..| ...+..|++ ||.|++ .+.+|+|.+.... .......+|+.+.++
T Consensus 52 ~~lvllHG~~~~~-----------~~~----~~l~~~L~~-~~~v~~---~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~ 112 (280)
T 3qmv_A 52 LRLVCFPYAGGTV-----------SAF----RGWQERLGD-EVAVVP---VQLPGRGLRLRERPYDTMEPLAEAVADALE 112 (280)
T ss_dssp EEEEEECCTTCCG-----------GGG----TTHHHHHCT-TEEEEE---CCCTTSGGGTTSCCCCSHHHHHHHHHHHHH
T ss_pred ceEEEECCCCCCh-----------HHH----HHHHHhcCC-CceEEE---EeCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 8899999964211 111 133445555 999999 6667787764322 224555666655554
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCcee----EEEEeccCCCCCCCCCCccc-cc----------------
Q 002164 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFC----CGIARSGAYNRTLTPFGFQN-ED---------------- 807 (958)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~----a~v~~~~~~~~~~~~~~~~~-~~---------------- 807 (958)
.+. ..+++.|+||||||.+|+.+|.+.|+++. .++..+.............. ..
T Consensus 113 ~~~-----~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (280)
T 3qmv_A 113 EHR-----LTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDA 187 (280)
T ss_dssp HTT-----CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC--
T ss_pred HhC-----CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChh
Confidence 431 33689999999999999999999877665 55555432110000000000 00
Q ss_pred --------c----hhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCc
Q 002164 808 --------R----TLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESH 875 (958)
Q Consensus 808 --------~----~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H 875 (958)
. ...........+.+ ..+.++++|+|+++|++|..++ +....++.+.+. ..++++++++ ||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~G~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~g-gH 260 (280)
T 3qmv_A 188 DTLGAAYFDRRLPVLRADLRACERYDW-HPRPPLDCPTTAFSAAADPIAT--PEMVEAWRPYTT---GSFLRRHLPG-NH 260 (280)
T ss_dssp -------CCTTHHHHHHHHHHHHTCCC-CCCCCBCSCEEEEEEEECSSSC--HHHHHTTGGGBS---SCEEEEEEEE-ET
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHhccc-cCCCceecCeEEEEecCCCCcC--hHHHHHHHHhcC---CceEEEEecC-CC
Confidence 0 00000011111111 2246788999999999999998 777766655442 3478888886 99
Q ss_pred cCCC-cccHHHHHHHHHHH
Q 002164 876 GYAA-RESIMHVLWETDRW 893 (958)
Q Consensus 876 ~~~~-~~~~~~~~~~i~~f 893 (958)
.... .++...+.+.|.+|
T Consensus 261 ~~~~~~~~~~~~~~~i~~~ 279 (280)
T 3qmv_A 261 FFLNGGPSRDRLLAHLGTE 279 (280)
T ss_dssp TGGGSSHHHHHHHHHHHTT
T ss_pred eEEcCchhHHHHHHHHHhh
Confidence 8643 24455555555544
No 327
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=2.9e-11 Score=134.21 Aligned_cols=243 Identities=12% Similarity=0.129 Sum_probs=154.9
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++||....+ +.|.+|++.. ++....+.+.. +..
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d---------------------------------g~i~iw~~~~-~~~~~~~~~~~--h~~ 56 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSD---------------------------------KTIKIFEVEG-ETHKLIDTLTG--HEG 56 (379)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SCEEEEEEET-TEEEEEEEECC--CSS
T ss_pred cEEEEEEcCCCCEEEEEECC---------------------------------CcEEEEecCC-CcceeeeEecC--CCC
Confidence 56788999999999988765 4789999853 11112233433 334
Q ss_pred cccceeecCC--CCeEEEEEeeccccCCCCCceEEEEEcCCCce--eeccCCCCccccccccceEEecC--CeEEEEEec
Q 002164 190 KLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--RPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIP 263 (958)
Q Consensus 190 ~~~~~~wSPD--G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~--~~lt~~~~~~~~~~~~~~~wspD--G~~l~~~~~ 263 (958)
.+..+.|+|+ |+.|+.... ...|.+|++.+++. ......... .+..++|+|+ |+.|++..
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~~~~- 122 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSY---------DGKVLIWKEENGRWSQIAVHAVHSA----SVNSVQWAPHEYGPLLLVAS- 122 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEET---------TSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCGGGCSEEEEEE-
T ss_pred cEEEEEeCCCCCCCEEEEecc---------CCEEEEEEcCCCceeEeeeecCCCc----ceEEEEeCCCCCCCEEEEec-
Confidence 7889999988 888887552 45788888888752 222221222 2778999999 88888762
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC---eeeecCCC-ccccccc
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TVKEIGPP-AVYTSLD 338 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g---~~~~l~~~-~~~~~~~ 338 (958)
....|.++++ ++ ....+... ..+..+.
T Consensus 123 ------------------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 123 ------------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp ------------------------------------------------TTSEEEEEECCTTSCCCEEEEECCTTCEEEEE
T ss_pred ------------------------------------------------CCCcEEEEecCCCCceeeEEecCCCCceEEEE
Confidence 2245777777 44 12233333 6778899
Q ss_pred cCC-------------CCcEEEEEeecCCccccccCCCCCceeEEEeccCce--EEEeccCCccccCcccccccccCcce
Q 002164 339 PSP-------------DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRS 403 (958)
Q Consensus 339 ~Sp-------------DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~--~~~l~~~~~~~~~p~~~~~~~~~~~~ 403 (958)
|+| |++.|+..+.+ +.|.+||+.++. ...+.... .....+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~----------~h~~~v~~ 211 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGAD-------------NLVKIWKYNSDAQTYVLESTLE----------GHSDWVRD 211 (379)
T ss_dssp ECCCC----------CTTCEEEEEETT-------------SCEEEEEEETTTTEEEEEEEEC----------CCSSCEEE
T ss_pred EcCccccccccccCCCCCCEEEEEeCC-------------CeEEEEEecCCCcceeeEEEEe----------cccCcEeE
Confidence 999 79988887743 489999997432 11211111 11134578
Q ss_pred eeeecC---CCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC--ceEEE---eeccccCceeeecCCceEEEEEe
Q 002164 404 INWRSD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG--PEILH---KLDLRYGGISWCDDSLALVYESW 475 (958)
Q Consensus 404 ~~~spD---G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~--~~~l~---~~~~~~~~~~~spDg~~l~~~~~ 475 (958)
+.|+|| |+.++.. +..+.|.+|++ ..+.. ...+. .....+..+.|+|||+.|+....
T Consensus 212 ~~~sp~~~~~~~l~s~-------------~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 212 VAWSPTVLLRSYLASV-------------SQDRTCIIWTQ--DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 276 (379)
T ss_dssp EEECCCCSSSEEEEEE-------------ETTSCEEEEEE--SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES
T ss_pred EEECCCCCCCCeEEEE-------------eCCCEEEEEeC--CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC
Confidence 999999 6666552 44567888886 12221 22221 13445677899999999988766
Q ss_pred ccccceEEEEEcCCC
Q 002164 476 YKTRRTRTWVISPGS 490 (958)
Q Consensus 476 ~~~~~~~l~~~~~~~ 490 (958)
.+. .++|.++..+
T Consensus 277 dg~--i~iw~~~~~~ 289 (379)
T 3jrp_A 277 DNK--VTLWKENLEG 289 (379)
T ss_dssp SSS--EEEEEEEETT
T ss_pred CCc--EEEEeCCCCC
Confidence 433 6777776443
No 328
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.38 E-value=3.8e-12 Score=138.17 Aligned_cols=209 Identities=11% Similarity=-0.009 Sum_probs=123.9
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|..++.... + .++.|.||++||.+..... |.. ....|+ ..|.|++ .|.+|+
T Consensus 28 ~~g~~l~y~~~---G-----~g~~~~vvllHG~~~~~~~-----------w~~----~~~~L~-~~~~via---~Dl~Gh 80 (318)
T 2psd_A 28 VLDSFINYYDS---E-----KHAENAVIFLHGNATSSYL-----------WRH----VVPHIE-PVARCII---PDLIGM 80 (318)
T ss_dssp ETTEEEEEEEC---C-----SCTTSEEEEECCTTCCGGG-----------GTT----TGGGTT-TTSEEEE---ECCTTS
T ss_pred eCCeEEEEEEc---C-----CCCCCeEEEECCCCCcHHH-----------HHH----HHHHhh-hcCeEEE---EeCCCC
Confidence 37887765442 1 1224689999997532211 111 122344 4478999 667788
Q ss_pred CCcccch--h-hHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCC--CCC
Q 002164 727 GDEEAND--R-FVEQLVACAEAAVEEVVRRGVAHP-SKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRT--LTP 800 (958)
Q Consensus 727 G~~~~~~--~-~~~~~~~D~~~av~~l~~~~~~d~-~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~--~~~ 800 (958)
|.+.... . ......+|+.+.++. .+. +++.|+||||||.+++.+|.++|++++++|++++..... ...
T Consensus 81 G~S~~~~~~~~~~~~~a~dl~~ll~~------l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 154 (318)
T 2psd_A 81 GKSGKSGNGSYRLLDHYKYLTAWFEL------LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDE 154 (318)
T ss_dssp TTCCCCTTSCCSHHHHHHHHHHHHTT------SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTT
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHh------cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhh
Confidence 8875431 1 234445555554433 233 689999999999999999999999999999976432110 000
Q ss_pred CCc--------ccc--------c-------------chhhh-cHHHHH-----------------hcCc-----------
Q 002164 801 FGF--------QNE--------D-------------RTLWE-ATSTYV-----------------EMSP----------- 822 (958)
Q Consensus 801 ~~~--------~~~--------~-------------~~~~~-~~~~~~-----------------~~sp----------- 822 (958)
+.. ... . ..... ....|. ..-+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (318)
T 2psd_A 155 WPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQ 234 (318)
T ss_dssp SCSCHHHHHHHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHH
T ss_pred hhhHHHHHHHHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHH
Confidence 000 000 0 00000 000000 0000
Q ss_pred -----ccccCCC-CCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 823 -----FMSANKL-KKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 823 -----~~~~~~~-~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
...+.++ ++|+|+++|++| .++ + .+.++.+.+. ..+++++ ++||... .+....+.+.|.+||.+
T Consensus 235 ~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~--~-~~~~~~~~~~----~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~ 304 (318)
T 2psd_A 235 IVRNYNAYLRASDDLPKLFIESDPG-FFS--N-AIVEGAKKFP----NTEFVKV-KGLHFLQ-EDAPDEMGKYIKSFVER 304 (318)
T ss_dssp HHHHHHHHHHTCTTSCEEEEEEEEC-SSH--H-HHHHHHTTSS----SEEEEEE-EESSSGG-GTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCeEEEEeccc-cCc--H-HHHHHHHhCC----CcEEEEe-cCCCCCH-hhCHHHHHHHHHHHHHH
Confidence 0123456 899999999999 876 5 5555554432 3577777 6799764 56778899999999987
Q ss_pred hh
Q 002164 897 YC 898 (958)
Q Consensus 897 ~l 898 (958)
..
T Consensus 305 ~~ 306 (318)
T 2psd_A 305 VL 306 (318)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 329
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.38 E-value=5.4e-11 Score=137.54 Aligned_cols=248 Identities=9% Similarity=0.031 Sum_probs=144.5
Q ss_pred CCCCCceecCCC---------CEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCc-
Q 002164 109 PPLPALSFSPQR---------DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQ- 178 (958)
Q Consensus 109 ~~~~~~~~SPDG---------~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~- 178 (958)
..+..++|+|++ ++||........ ...+++.......+.++.|.||++.+ +....
T Consensus 134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~--------------~~~~~~~~~laS~s~D~tI~iWd~~~-~~~~~~ 198 (524)
T 2j04_B 134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD--------------EPLNEHLEMFDKEKHSSCIQIFKMNT-STLHCV 198 (524)
T ss_dssp C--CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------------------CEEEEEEEEET-TTCCEE
T ss_pred CceeEEEecccCCCCccCcCCeEEEEEEecccC--------------CccchhhhhhccCCCCceEEEEEccC-CCCCce
Confidence 357889999998 788877653110 00122222233344557899999854 21111
Q ss_pred -eeeeccCCCCCcccceeecCC------CCeEEEEEeeccccCCCCCceEEEEEcCCCcee------------eccCCCC
Q 002164 179 -EIEIQGFPDGAKLNFVTWSQD------GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR------------PLFQSPD 239 (958)
Q Consensus 179 -~~~lt~~~~~~~~~~~~wSPD------G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~------------~lt~~~~ 239 (958)
...+.. ....+...+|+|+ |+.||.... ...|.+|++.+++.. .+.. ..
T Consensus 199 ~~~~l~~--~~~~V~~v~wsp~~~~~~~~~~LAs~s~---------DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~-h~ 266 (524)
T 2j04_B 199 KVQTIVH--SFGEVWDLKWHEGCHAPHLVGCLSFVSQ---------EGTINFLEIIDNATDVHVFKMCEKPSLTLSL-AD 266 (524)
T ss_dssp EEEEEEE--CCCSEEEEEECSSCCCSSSSCEEEEEET---------TSCEEEEECCCCSSSSSEEECCCSCSEEECC-TT
T ss_pred EEEEEEe--cCCcEEEEEECCCCCCCCCCceEEEEec---------CCeEEEEEcCCCccccccceeecCceEEEEc-CC
Confidence 112332 2245888999997 567776542 456777888765421 1111 11
Q ss_pred ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 240 ~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
..+..++|+|++ .|+... ..+.|.++
T Consensus 267 ----~~v~sv~~s~~~-~lasgs-------------------------------------------------~DgtV~lW 292 (524)
T 2j04_B 267 ----SLITTFDFLSPT-TVVCGF-------------------------------------------------KNGFVAEF 292 (524)
T ss_dssp ----TCEEEEEESSSS-EEEEEE-------------------------------------------------TTSEEEEE
T ss_pred ----CCEEEEEecCCC-eEEEEe-------------------------------------------------CCCEEEEE
Confidence 126789999876 566541 23457778
Q ss_pred Ec-CCe-e-eecCCC-cccccc--ccCCCC-cEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCc
Q 002164 320 SL-DGT-V-KEIGPP-AVYTSL--DPSPDE-KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIP 391 (958)
Q Consensus 320 ~~-~g~-~-~~l~~~-~~~~~~--~~SpDG-k~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p 391 (958)
|+ ++. . ..+... ..+.++ .|+||| +.|+..+. ++.+.+||+..... +.+......
T Consensus 293 D~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~-------------D~tvklWD~~~~~~~~~~~~~~~~---- 355 (524)
T 2j04_B 293 DLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV-------------DGYFYIFNPKDIATTKTTVSRFRG---- 355 (524)
T ss_dssp ETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET-------------TSEEEEECGGGHHHHCEEEEECSC----
T ss_pred ECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc-------------CCeEEEEECCCCCccccccccccc----
Confidence 88 553 2 223333 667777 689999 66666653 34899999975432 222111000
Q ss_pred ccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEE
Q 002164 392 IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALV 471 (958)
Q Consensus 392 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~ 471 (958)
..+..++|+|||+.++.. +..+.|.+|++ ..+.....+..+...+..++|||||+.|+
T Consensus 356 -------~~v~~v~fsp~~~~l~s~-------------~~d~tv~lwd~--~~~~~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 356 -------SNLVPVVYCPQIYSYIYS-------------DGASSLRAVPS--RAAFAVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp -------CSCCCEEEETTTTEEEEE-------------CSSSEEEEEET--TCTTCCEEEEECSSCEEEEECCSSCCBCE
T ss_pred -------CcccceEeCCCcCeEEEe-------------CCCCcEEEEEC--cccccceeeecCCCceEEEEeCCCCCeEE
Confidence 124578999999986652 34557889996 34445567777788889999999999988
Q ss_pred EEEec
Q 002164 472 YESWY 476 (958)
Q Consensus 472 ~~~~~ 476 (958)
..+.+
T Consensus 414 Sgs~D 418 (524)
T 2j04_B 414 AGSAD 418 (524)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 76643
No 330
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.37 E-value=4.3e-11 Score=132.05 Aligned_cols=241 Identities=11% Similarity=0.041 Sum_probs=143.2
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++||....+ .+.+|++.. ......... .
T Consensus 21 ~V~~v~fs~dg~~la~g~~~----------------------------------~~~iw~~~~----~~~~~~~~~---~ 59 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLK----------------------------------SFEIYNVHP----VAHIMSQEM---R 59 (355)
T ss_dssp CCCEEEECTTSSEEEEECSS----------------------------------EEEEEEETT----EEEEEEEEC---S
T ss_pred ceEEEEECCCCCEEEEEcCC----------------------------------EEEEEecCC----cceeeeeec---C
Confidence 68899999999999977653 567888743 222211111 1
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+....|+++++.++++.. +...|.+||..+++.......... +..+.|++++. ++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~--------~d~~v~iWd~~~~~~~~~~~~~~~-----v~~v~~~~~~~--~~~-------- 116 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTG--------VKEVVHIWDDVKKQDVSRIKVDAP-----VKDLFLSREFI--VVS-------- 116 (355)
T ss_dssp CCCEEEECTTSSEEEEECS--------STTEEEEEETTTTEEEEEEECSSC-----EEEEEECSSEE--EEE--------
T ss_pred CeEEEEEcCCCCEEEEEEC--------CccEEEEEECCCCcEEEEEECCCc-----eEEEEEcCCEE--EEE--------
Confidence 3677889999999887642 235899999988876544333332 66788887753 322
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC-e-eeecCCCccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-T-VKEIGPPAVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g-~-~~~l~~~~~~~~~~~SpDGk~l 346 (958)
....++++++ ++ + ...+. ......++++ +.+
T Consensus 117 ------------------------------------------~~~~i~i~d~~~~~~~~~~~~--~~~~~~~~s~--~~l 150 (355)
T 3vu4_A 117 ------------------------------------------YGDVISVFKFGNPWKRITDDI--RFGGVCEFSN--GLL 150 (355)
T ss_dssp ------------------------------------------ETTEEEEEESSTTCCBSSCCE--EEEEEEEEET--TEE
T ss_pred ------------------------------------------EcCEEEEEECCCCceeeEEec--cCCceEEEEc--cEE
Confidence 1234777887 54 2 22221 1223345666 777
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEEEeccCC--ccccCc--ccccccccCcceeeeecCCCCceEEEEeccC
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP--LAEDIP--IAFNSVRKGMRSINWRSDKPSTLYWAETQDG 422 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~--~~~~~p--~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~ 422 (958)
++.+.. .++.|.+||+.++......... .....| ..+.++...+..++|+|||+.|+..
T Consensus 151 a~~sg~-----------~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~------ 213 (355)
T 3vu4_A 151 VYSNEF-----------NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC------ 213 (355)
T ss_dssp EEEESS-----------CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE------
T ss_pred EEeCCC-----------cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE------
Confidence 776311 2458999999864310000000 000000 1112233556789999999987763
Q ss_pred CCcccccccCCe-EEEEeCCCCCCCCceEEE-e-eccccCceeeecCCceEEEEEeccccceEEEEEcC
Q 002164 423 GDAKVEVTPRDI-IYTQQAEPVQGEGPEILH-K-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 423 ~~~~~~~~~~~~-l~~~~~~~~~g~~~~~l~-~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
+..+. |.+||+ .++.....+. . +...+..++|||||+.|+..+.++. .+||.+..
T Consensus 214 -------s~d~~~v~iwd~--~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~--v~iw~~~~ 271 (355)
T 3vu4_A 214 -------SQDGTIIRVFKT--EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT--LHVFEIFN 271 (355)
T ss_dssp -------ETTCSEEEEEET--TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE--EEEEESSC
T ss_pred -------eCCCCEEEEEEC--CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE--EEEEEccC
Confidence 44565 899996 3344444554 2 5667888999999999988765543 55665543
No 331
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.37 E-value=2.3e-11 Score=131.88 Aligned_cols=245 Identities=13% Similarity=0.189 Sum_probs=151.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++||..+.+ +.|.+|++.. +.......+.++ ..
T Consensus 15 ~V~~v~~s~~g~~lasgs~D---------------------------------~~v~lwd~~~-~~~~~~~~l~gH--~~ 58 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSD---------------------------------RSVKIFDVRN-GGQILIADLRGH--EG 58 (316)
T ss_dssp CEEEEEECGGGCEEEEEETT---------------------------------TEEEEEEEET-TEEEEEEEEECC--SS
T ss_pred eEEEeeEcCCCCEEEEEeCC---------------------------------CeEEEEEecC-CCcEEEEEEcCC--Cc
Confidence 56788999999999998875 4789999854 100012334443 35
Q ss_pred cccceeecC--CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeecc--CCCCccccccccceEEecC--CeEEEEEec
Q 002164 190 KLNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLF--QSPDIYLNAIFDNFVWVNN--STLLVCTIP 263 (958)
Q Consensus 190 ~~~~~~wSP--DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt--~~~~~~~~~~~~~~~wspD--G~~l~~~~~ 263 (958)
.+...+|+| +|+.|+.... ...|.+|++.+++...+. ..... .+..++|+|| |..|+...
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~---------D~~v~iWd~~~~~~~~~~~~~~h~~----~V~~v~~~p~~~g~~lasgs- 124 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSY---------DRKVIIWREENGTWEKSHEHAGHDS----SVNSVCWAPHDYGLILACGS- 124 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEET---------TSCEEEECCSSSCCCEEEEECCCSS----CCCEEEECCTTTCSCEEEEC-
T ss_pred cEEEEEeCCCCCCCEEEEEEC---------CCEEEEEECCCCcceEEEEccCCCC----ceEEEEECCCCCCcEEEEEc-
Confidence 788999987 4888887552 557888888876432221 11221 2778999998 77777661
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC-ee---eecCCC-cccccc
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TV---KEIGPP-AVYTSL 337 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g-~~---~~l~~~-~~~~~~ 337 (958)
....|.++++ ++ .. ..+... ..+..+
T Consensus 125 ------------------------------------------------~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 125 ------------------------------------------------SDGAISLLTYTGEGQWEVKKINNAHTIGCNAV 156 (316)
T ss_dssp ------------------------------------------------SSSCEEEEEECSSSCEEECCBTTSSSSCBCCC
T ss_pred ------------------------------------------------CCCCEEEEecCCCCCcceeeeeccccCCcceE
Confidence 1233555666 33 21 112222 567788
Q ss_pred ccCCCC-----------------cEEEEEeecCCccccccCCCCCceeEEEeccCc-eEEEeccCCccccCccccccccc
Q 002164 338 DPSPDE-----------------KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRK 399 (958)
Q Consensus 338 ~~SpDG-----------------k~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~-~~~~l~~~~~~~~~p~~~~~~~~ 399 (958)
.|+|++ ++|+..+ .++.|.+||+.++ ..+.+.... ++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-------------~D~~v~lWd~~~~~~~~~~~~l~----------~h~~ 213 (316)
T 3bg1_A 157 SWAPAVVPGSLIDHPSGQKPNYIKRFASGG-------------CDNLIKLWKEEEDGQWKEEQKLE----------AHSD 213 (316)
T ss_dssp EECCCCCC------CCSCCCCCCCBEECCB-------------TTSBCCEEEECTTSCEEEEECCB----------CCSS
T ss_pred EEccccCCccccccccccCccccceEEEec-------------CCCeEEEEEeCCCCccceeeecc----------cCCC
Confidence 999983 4554433 2458999999743 222222221 1224
Q ss_pred CcceeeeecCC----CCceEEEEeccCCCcccccccCCeEEEEeCCCCCCC--CceEEEeeccccCceeeecCCceEEEE
Q 002164 400 GMRSINWRSDK----PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE--GPEILHKLDLRYGGISWCDDSLALVYE 473 (958)
Q Consensus 400 ~~~~~~~spDG----~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~--~~~~l~~~~~~~~~~~~spDg~~l~~~ 473 (958)
.+..++|+||+ +.|+.. +..+.|.+|+++....+ ..+.+......+..++|+|||+.|+..
T Consensus 214 ~V~~v~~sp~~~~~~~~las~-------------s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTSTIASC-------------SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp CEEEEECCCCSSCSCCEEEEE-------------ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred ceEEEEecCCCCCCCceEEEE-------------cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 56789999997 444431 44667889986221111 123455556677889999999999887
Q ss_pred EeccccceEEEEEcCCC
Q 002164 474 SWYKTRRTRTWVISPGS 490 (958)
Q Consensus 474 ~~~~~~~~~l~~~~~~~ 490 (958)
..++. .+||..+..+
T Consensus 281 ~~D~~--v~lw~~~~~g 295 (316)
T 3bg1_A 281 GGDNK--VTLWKESVDG 295 (316)
T ss_dssp ESSSC--EEEEEECTTS
T ss_pred cCCCe--EEEEEECCCC
Confidence 65544 7788776543
No 332
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.37 E-value=4.8e-12 Score=133.30 Aligned_cols=193 Identities=13% Similarity=0.113 Sum_probs=112.5
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchh-hHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDR-FVEQLVACAEAAVE 748 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~-~~~~~~~D~~~av~ 748 (958)
.|.||++||...... .| ......|+++||.|++ .|.+|+|.+..... .+....+|+.+
T Consensus 16 ~~~vvllHG~~~~~~-----------~w----~~~~~~L~~~~~~vi~---~Dl~GhG~S~~~~~~~~~~~a~~l~~--- 74 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA-----------DW----QPVLSHLARTQCAALT---LDLPGHGTNPERHCDNFAEAVEMIEQ--- 74 (264)
T ss_dssp BCEEEEECCTTCCGG-----------GG----HHHHHHHTTSSCEEEE---ECCTTCSSCC-------CHHHHHHHH---
T ss_pred CCcEEEEcCCCCCHH-----------HH----HHHHHHhcccCceEEE---ecCCCCCCCCCCCccCHHHHHHHHHH---
Confidence 478999999642211 11 1344556658999999 66678888754221 12233333333
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHH---HHHhCCCceeEEEEeccCCCCCCCC-----------CC--cc-c---c--
Q 002164 749 EVVRRGVAHPSKIAVGGHSYGAFMTAN---LLAHAPHLFCCGIARSGAYNRTLTP-----------FG--FQ-N---E-- 806 (958)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~---~a~~~p~~~~a~v~~~~~~~~~~~~-----------~~--~~-~---~-- 806 (958)
+.+.-.++..++.|+||||||.+++. +|.++|++++++|+.++........ +. +. . .
T Consensus 75 -~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
T 1r3d_A 75 -TVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVL 153 (264)
T ss_dssp -HHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred -HHHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHH
Confidence 33332232224999999999999999 7788999999999987643211000 00 00 0 0
Q ss_pred ----cchhhh-----------------cH----HHHHh------cCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHH
Q 002164 807 ----DRTLWE-----------------AT----STYVE------MSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFF 855 (958)
Q Consensus 807 ----~~~~~~-----------------~~----~~~~~------~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~ 855 (958)
....+. .. ..+.. .+....+.++++|+|+++|++|..++ ++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-------~~~ 226 (264)
T 1r3d_A 154 SDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-------QLA 226 (264)
T ss_dssp HHHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-------HHH
T ss_pred HHHhhhhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-------HHH
Confidence 000000 00 00000 01112345788999999999996431 233
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 856 NALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 856 ~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
+.+. .+++++|++||... .+....+.+.+.+|+.++
T Consensus 227 ~~~~-----~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 227 ESSG-----LSYSQVAQAGHNVH-HEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HHHC-----SEEEEETTCCSCHH-HHCHHHHHHHHHHHHHHH
T ss_pred HHhC-----CcEEEcCCCCCchh-hcCHHHHHHHHHHHHHHh
Confidence 3331 46889999999873 456778889999999875
No 333
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.37 E-value=7.1e-11 Score=130.40 Aligned_cols=266 Identities=12% Similarity=0.056 Sum_probs=162.8
Q ss_pred CCCCceecCC---CCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCce-eeeccC
Q 002164 110 PLPALSFSPQ---RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQE-IEIQGF 185 (958)
Q Consensus 110 ~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~-~~lt~~ 185 (958)
.+..++|||| |++|+....+ +.|.+|++...+ ... ..+..
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~d---------------------------------g~i~iw~~~~~~--~~~~~~~~~- 84 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWA---------------------------------NDVRCWEVQDSG--QTIPKAQQM- 84 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETT---------------------------------SEEEEEEECTTS--CEEEEEEEE-
T ss_pred ceEEEEEcCCCCCceEEEEECCC---------------------------------CcEEEEEcCCCC--ceeEEEecc-
Confidence 5778999999 6888887765 478999996422 222 34443
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEE--ecCCeEEEEEec
Q 002164 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW--VNNSTLLVCTIP 263 (958)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~w--spDG~~l~~~~~ 263 (958)
+...+....|+|||++|+... ....|.+|++.+++...+...... +..++| +||++.|+...
T Consensus 85 -h~~~v~~~~~~~~~~~l~s~~---------~dg~v~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~l~~~~- 148 (368)
T 3mmy_A 85 -HTGPVLDVCWSDDGSKVFTAS---------CDKTAKMWDLSSNQAIQIAQHDAP-----VKTIHWIKAPNYSCVMTGS- 148 (368)
T ss_dssp -CSSCEEEEEECTTSSEEEEEE---------TTSEEEEEETTTTEEEEEEECSSC-----EEEEEEEECSSCEEEEEEE-
T ss_pred -ccCCEEEEEECcCCCEEEEEc---------CCCcEEEEEcCCCCceeeccccCc-----eEEEEEEeCCCCCEEEEcc-
Confidence 235789999999999999755 256899999999887776544432 778999 89999888761
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCCccccccccCC
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLDPSP 341 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~~~~~~~~~Sp 341 (958)
....|.++++ +++. ..+..........++
T Consensus 149 ------------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~- 179 (368)
T 3mmy_A 149 ------------------------------------------------WDKTLKFWDTRSSNPMMVLQLPERCYCADVI- 179 (368)
T ss_dssp ------------------------------------------------TTSEEEEECSSCSSCSEEEECSSCEEEEEEE-
T ss_pred ------------------------------------------------CCCcEEEEECCCCcEEEEEecCCCceEEEec-
Confidence 2245778887 6643 233222333344444
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEe-ccCCccccCcccccccccCcceeeeecCCCC----ceEE
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVREL-CDLPLAEDIPIAFNSVRKGMRSINWRSDKPS----TLYW 416 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l-~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~----l~~~ 416 (958)
+..++..... +.+.+|++........ ...... .....+.+.+++.. ++..
T Consensus 180 -~~~~~~~~~~-------------~~i~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
T 3mmy_A 180 -YPMAVVATAE-------------RGLIVYQLENQPSEFRRIESPLK-----------HQHRCVAIFKDKQNKPTGFALG 234 (368)
T ss_dssp -TTEEEEEEGG-------------GCEEEEECSSSCEEEEECCCSCS-----------SCEEEEEEEECTTSCEEEEEEE
T ss_pred -CCeeEEEeCC-------------CcEEEEEeccccchhhhcccccc-----------CCCceEEEcccCCCCCCeEEEe
Confidence 3455555432 3788999885432211 111100 12233445554443 3331
Q ss_pred EEeccCCCcccccccCCeEEEEeCCCCCCCC----ceEEEeecc------------ccCceeeecCCceEEEEEeccccc
Q 002164 417 AETQDGGDAKVEVTPRDIIYTQQAEPVQGEG----PEILHKLDL------------RYGGISWCDDSLALVYESWYKTRR 480 (958)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~----~~~l~~~~~------------~~~~~~~spDg~~l~~~~~~~~~~ 480 (958)
+..+.+.+|+. .... ...+..... .+..++|+|||+.|+....++.
T Consensus 235 -------------~~dg~i~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-- 296 (368)
T 3mmy_A 235 -------------SIEGRVAIHYI---NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-- 296 (368)
T ss_dssp -------------ETTSEEEEEES---SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC--
T ss_pred -------------cCCCcEEEEec---CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe--
Confidence 44567888886 3221 223322222 4778999999999887764432
Q ss_pred eEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEee
Q 002164 481 TRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIK 529 (958)
Q Consensus 481 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 529 (958)
|.++++.++ +...........+.. ++|+|||++|+....
T Consensus 297 --i~iwd~~~~--~~~~~~~~~~~~v~~------~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 297 --FSFWDKDAR--TKLKTSEQLDQPISA------CCFNHNGNIFAYASS 335 (368)
T ss_dssp --EEEEETTTT--EEEEECCCCSSCEEE------EEECTTSSCEEEEEC
T ss_pred --EEEEECCCC--cEEEEecCCCCCceE------EEECCCCCeEEEEec
Confidence 555566653 333333333333333 889999999998873
No 334
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.8e-10 Score=124.11 Aligned_cols=273 Identities=13% Similarity=0.062 Sum_probs=168.9
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
..+....| |||++|+... ....|.+|++.+++........... +..++|+|||+.|+...
T Consensus 19 ~~v~~~~~-~~~~~l~s~~---------~dg~v~vw~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~------ 78 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVS---------RDGTVRLWSKDDQWLGTVVYTGQGF----LNSVCYDSEKELLLFGG------ 78 (313)
T ss_dssp SCEEEEEE-EETTEEEEEE---------TTSEEEEEEESSSEEEEEEEECSSC----EEEEEEETTTTEEEEEE------
T ss_pred CCcEEEEe-cCCCEEEEEE---------cCCcEEEEECCCCEEEEEeecCCcc----EEEEEECCCCCEEEEec------
Confidence 46888899 9999988755 2568888998887765544433322 77899999999999772
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC---e-eeecCCC-ccccccccCCC
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---T-VKEIGPP-AVYTSLDPSPD 342 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g---~-~~~l~~~-~~~~~~~~SpD 342 (958)
....+.++++ +. + ...+... ..+..+.| +
T Consensus 79 -------------------------------------------~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 113 (313)
T 3odt_A 79 -------------------------------------------KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--Q 113 (313)
T ss_dssp -------------------------------------------TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--E
T ss_pred -------------------------------------------CCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--c
Confidence 1233555555 32 1 2333333 55667777 6
Q ss_pred CcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeec-CCCCceEEEEecc
Q 002164 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS-DKPSTLYWAETQD 421 (958)
Q Consensus 343 Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp-DG~~l~~~~~~~~ 421 (958)
++.|+..+. ++.+.+|| .+.....+..+. ..+..+.|+| +++.++..
T Consensus 114 ~~~l~~~~~-------------d~~i~~~d-~~~~~~~~~~~~-------------~~v~~~~~~~~~~~~l~~~----- 161 (313)
T 3odt_A 114 DGVVISGSW-------------DKTAKVWK-EGSLVYNLQAHN-------------ASVWDAKVVSFSENKFLTA----- 161 (313)
T ss_dssp TTEEEEEET-------------TSEEEEEE-TTEEEEEEECCS-------------SCEEEEEEEETTTTEEEEE-----
T ss_pred CCEEEEEeC-------------CCCEEEEc-CCcEEEecccCC-------------CceeEEEEccCCCCEEEEE-----
Confidence 788877763 34899999 333333333221 3346788888 78776653
Q ss_pred CCCcccccccCCeEEEEeCCCCCCCCceEEEe-eccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEec
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD 500 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 500 (958)
+..+.+.+|+. +.....+.. ....+..+.|+|+++ |+.... + ..|.++++..+ +......
T Consensus 162 --------~~d~~i~i~d~----~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-d---g~i~i~d~~~~--~~~~~~~ 222 (313)
T 3odt_A 162 --------SADKTIKLWQN----DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSN-D---GLIKLVDMHTG--DVLRTYE 222 (313)
T ss_dssp --------ETTSCEEEEET----TEEEEEECSSCSSCEEEEEEEETTE-EEEEET-T---SEEEEEETTTC--CEEEEEE
T ss_pred --------ECCCCEEEEec----CceEEEEeccCcccEEEEEEcCCCe-EEEccC-C---CeEEEEECCch--hhhhhhh
Confidence 34567888883 223333333 455677899999998 554433 2 24667777664 3343444
Q ss_pred cCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeE
Q 002164 501 RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTV 580 (958)
Q Consensus 501 ~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~ 580 (958)
.....+.. +.|+|+|+ |+.... ...|++||+.+++.......... .+.
T Consensus 223 ~~~~~i~~------~~~~~~~~-l~~~~~---------------------dg~v~iwd~~~~~~~~~~~~~~~----~i~ 270 (313)
T 3odt_A 223 GHESFVYC------IKLLPNGD-IVSCGE---------------------DRTVRIWSKENGSLKQVITLPAI----SIW 270 (313)
T ss_dssp CCSSCEEE------EEECTTSC-EEEEET---------------------TSEEEEECTTTCCEEEEEECSSS----CEE
T ss_pred cCCceEEE------EEEecCCC-EEEEec---------------------CCEEEEEECCCCceeEEEeccCc----eEE
Confidence 33333333 78999994 554441 12699999998887665544322 122
Q ss_pred eecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002164 581 ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (958)
Q Consensus 581 ~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~ 621 (958)
...|++|++ ++. .. ....++++++.+++.
T Consensus 271 -------~~~~~~~~~-~~~-~~---~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 271 -------SVDCMSNGD-IIV-GS---SDNLVRIFSQEKSRW 299 (313)
T ss_dssp -------EEEECTTSC-EEE-EE---TTSCEEEEESCGGGC
T ss_pred -------EEEEccCCC-EEE-Ee---CCCcEEEEeCCCCce
Confidence 246889987 333 22 235688998877654
No 335
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.36 E-value=1.9e-10 Score=139.28 Aligned_cols=298 Identities=10% Similarity=0.055 Sum_probs=176.1
Q ss_pred eeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc------eeeccCCCCccccccccceEEecC
Q 002164 181 EIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK------ARPLFQSPDIYLNAIFDNFVWVNN 254 (958)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~------~~~lt~~~~~~~~~~~~~~~wspD 254 (958)
.+.+++ ..+...+|+||+..++.+.. ....|.+|++..+. .+.+..+... +..++|+||
T Consensus 377 ~l~~H~--~~V~~v~~~~~~~~~l~s~s--------~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~-----v~~v~~s~~ 441 (694)
T 3dm0_A 377 TMRAHT--DMVTAIATPIDNADIIVSAS--------RDKSIILWKLTKDDKAYGVAQRRLTGHSHF-----VEDVVLSSD 441 (694)
T ss_dssp EEECCS--SCEEEEECCTTCCSEEEEEE--------TTSEEEEEECCCSTTCSCEEEEEEECCSSC-----EEEEEECTT
T ss_pred hcccCC--ceeEEEEecCCCCCEEEEEe--------CCCcEEEEEccCCCcccccccceecCCCCc-----EEEEEECCC
Confidence 344433 56889999998755554432 24567777776532 1233333322 778999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCCC-
Q 002164 255 STLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPP- 331 (958)
Q Consensus 255 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~~- 331 (958)
|++|+... ....|.++++ ++. .+.+..+
T Consensus 442 g~~l~sgs-------------------------------------------------~Dg~v~vwd~~~~~~~~~~~~h~ 472 (694)
T 3dm0_A 442 GQFALSGS-------------------------------------------------WDGELRLWDLAAGVSTRRFVGHT 472 (694)
T ss_dssp SSEEEEEE-------------------------------------------------TTSEEEEEETTTTEEEEEEECCS
T ss_pred CCEEEEEe-------------------------------------------------CCCcEEEEECCCCcceeEEeCCC
Confidence 99998761 2345778888 774 3444444
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~ 411 (958)
..+..++|||||++|+..+.+ +.|.+||+.+.....+..... ++...+..+.|+|++.
T Consensus 473 ~~v~~~~~s~~~~~l~s~s~D-------------~~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 473 KDVLSVAFSLDNRQIVSASRD-------------RTIKLWNTLGECKYTISEGGE---------GHRDWVSCVRFSPNTL 530 (694)
T ss_dssp SCEEEEEECTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSTT---------SCSSCEEEEEECSCSS
T ss_pred CCEEEEEEeCCCCEEEEEeCC-------------CEEEEEECCCCcceeeccCCC---------CCCCcEEEEEEeCCCC
Confidence 778899999999999887743 489999987665444432110 1123457789999985
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
.-.+.+ .+..+.|.+|++ ..+.....+..+...+..++|+|||+.|+..+.++. .+|| |+.++
T Consensus 531 ~~~l~s-----------~s~d~~v~vwd~--~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~--i~iw--d~~~~ 593 (694)
T 3dm0_A 531 QPTIVS-----------ASWDKTVKVWNL--SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV--VLLW--DLAEG 593 (694)
T ss_dssp SCEEEE-----------EETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB--CEEE--ETTTT
T ss_pred cceEEE-----------EeCCCeEEEEEC--CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe--EEEE--ECCCC
Confidence 422221 134567899996 233333445556677888999999999887765443 4454 55543
Q ss_pred CCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCC
Q 002164 492 DVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESD 571 (958)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~ 571 (958)
+....... ...+.. ++|+||+.+|+.... ..|.+||+.+++........
T Consensus 594 --~~~~~~~~-~~~v~~------~~~sp~~~~l~~~~~----------------------~~i~iwd~~~~~~~~~~~~~ 642 (694)
T 3dm0_A 594 --KKLYSLEA-NSVIHA------LCFSPNRYWLCAATE----------------------HGIKIWDLESKSIVEDLKVD 642 (694)
T ss_dssp --EEEECCBC-SSCEEE------EEECSSSSEEEEEET----------------------TEEEEEETTTTEEEEEECCC
T ss_pred --ceEEEecC-CCcEEE------EEEcCCCcEEEEEcC----------------------CCEEEEECCCCCChhhhccc
Confidence 21211111 111222 789999988766541 14899999888765443322
Q ss_pred cccccce-----eEe---ecCCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002164 572 KEKYYET-----TVA---LMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (958)
Q Consensus 572 ~~~~~~~-----~~~---~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~ 616 (958)
...-.+. ... ....-...+|||||+.|+.-.. ...+.++++
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~----Dg~i~iW~i 691 (694)
T 3dm0_A 643 LKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT----DGVIRVWGI 691 (694)
T ss_dssp CC----------------CCCCEEEEEECTTSSEEEEEET----TSEEEEEEC
T ss_pred cccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC----CCeEEEEec
Confidence 1100000 000 0000123578999987764333 245777775
No 336
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.03 E-value=8.2e-14 Score=149.76 Aligned_cols=197 Identities=10% Similarity=0.027 Sum_probs=118.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccch-------hhHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEAND-------RFVEQLVAC 742 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~-------~~~~~~~~D 742 (958)
.|+||++||.+... ..|. ..+..|+ +||.|++ .+.+|+|.+.... .......+|
T Consensus 25 ~p~vv~lHG~~~~~-----------~~~~----~~~~~l~-~g~~v~~---~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (304)
T 3b12_A 25 GPALLLLHGFPQNL-----------HMWA----RVAPLLA-NEYTVVC---ADLRGYGGSSKPVGAPDHANYSFRAMASD 85 (304)
Confidence 57899999964221 1121 2234555 8999999 6667888775431 112344555
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCC----------CC---------c
Q 002164 743 AEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTP----------FG---------F 803 (958)
Q Consensus 743 ~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~----------~~---------~ 803 (958)
+.++++.+ +.+++.++|||+||.+++.+|.++|++++++|++++........ +. .
T Consensus 86 l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
T 3b12_A 86 QRELMRTL------GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPY 159 (304)
Confidence 55555543 33589999999999999999999999999999998754311000 00 0
Q ss_pred cc---------ccch-hhh---------cH---HHH-----------------Hhc---Cc----ccccCCCCCCEEEEe
Q 002164 804 QN---------EDRT-LWE---------AT---STY-----------------VEM---SP----FMSANKLKKPILLVH 837 (958)
Q Consensus 804 ~~---------~~~~-~~~---------~~---~~~-----------------~~~---sp----~~~~~~~~~P~Lii~ 837 (958)
.. .... ... .. ..+ ... +. ...+.++++|+|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 239 (304)
T 3b12_A 160 PEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFS 239 (304)
Confidence 00 0000 000 00 000 000 00 011567899999999
Q ss_pred eCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
|++|..++ +......+.+.+. .+++.++ ++||.+. .++...+.+.|.+||.+..
T Consensus 240 G~~D~~~~-~~~~~~~~~~~~~----~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~~ 293 (304)
T 3b12_A 240 GSAGLMHS-LFEMQVVWAPRLA----NMRFASL-PGGHFFV-DRFPDDTARILREFLSDAR 293 (304)
Confidence 99996553 0333333333332 3577778 9999874 4566778888999998764
No 337
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.34 E-value=9.4e-11 Score=130.08 Aligned_cols=231 Identities=12% Similarity=0.106 Sum_probs=141.0
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCC--ceeeccCCCCccccccccceEEecC--CeEEEEEecC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG--KARPLFQSPDIYLNAIFDNFVWVNN--STLLVCTIPL 264 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g--~~~~lt~~~~~~~~~~~~~~~wspD--G~~l~~~~~~ 264 (958)
..+...+|||||++|+.... ...|.+|++.++ +.......... .+..++|+++ ++.|+...
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~l~s~~-- 76 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSS---------DKTIKIFEVEGETHKLIDTLTGHEG----PVWRVDWAHPKFGTILASCS-- 76 (379)
T ss_dssp CCEEEEEECSSSSEEEEEET---------TSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCGGGCSEEEEEE--
T ss_pred ccEEEEEEcCCCCEEEEEEC---------CCcEEEEecCCCcceeeeEecCCCC----cEEEEEeCCCCCCCEEEEec--
Confidence 46889999999999988652 445666776633 33222222222 2778999977 88888762
Q ss_pred CCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe---eeecCCC-cccccccc
Q 002164 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDP 339 (958)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~ 339 (958)
....|.++++ +++ ...+... ..+..++|
T Consensus 77 -----------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 109 (379)
T 3jrp_A 77 -----------------------------------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 109 (379)
T ss_dssp -----------------------------------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred -----------------------------------------------cCCEEEEEEcCCCceeEeeeecCCCcceEEEEe
Confidence 1234667777 663 3344433 67889999
Q ss_pred CCC--CcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeec---------
Q 002164 340 SPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS--------- 408 (958)
Q Consensus 340 SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp--------- 408 (958)
+|+ |+.|+....+ +.+.+||+........... ......+..+.|+|
T Consensus 110 ~~~~~~~~l~~~~~d-------------~~i~v~d~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 110 APHEYGPLLLVASSD-------------GKVSVVEFKENGTTSPIII----------DAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp CCGGGCSEEEEEETT-------------SEEEEEECCTTSCCCEEEE----------ECCTTCEEEEEECCCC-------
T ss_pred CCCCCCCEEEEecCC-------------CcEEEEecCCCCceeeEEe----------cCCCCceEEEEEcCccccccccc
Confidence 999 8988888743 4899999985421111000 01113457889999
Q ss_pred ----CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCce----EEEeeccccCceeeecC---CceEEEEEecc
Q 002164 409 ----DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE----ILHKLDLRYGGISWCDD---SLALVYESWYK 477 (958)
Q Consensus 409 ----DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~----~l~~~~~~~~~~~~spD---g~~l~~~~~~~ 477 (958)
|++.++.. +..+.|++|++ ..+.... .+..+...+..+.|+|+ ++.|+....++
T Consensus 167 ~~~~~~~~l~~~-------------~~dg~i~i~d~--~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 167 NGTKESRKFVTG-------------GADNLVKIWKY--NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp ---CTTCEEEEE-------------ETTSCEEEEEE--ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred cCCCCCCEEEEE-------------eCCCeEEEEEe--cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 67776663 34567888885 2232222 22334556778999999 77777665443
Q ss_pred ccceEEEEEcCCCCCCCcEEEecc--CCccccCCCCCCceEeccCCceEEEEe
Q 002164 478 TRRTRTWVISPGSKDVAPRILFDR--SSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 478 ~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
. .++|.+...... ....+... ....+.. ++|+|||++|+...
T Consensus 232 ~--i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~------~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 232 T--CIIWTQDNEQGP-WKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 275 (379)
T ss_dssp C--EEEEEESSTTSC-CEEEESSSSCCSSCEEE------EEECSSSCCEEEEE
T ss_pred E--EEEEeCCCCCcc-ceeeeeccccCCCcEEE------EEEcCCCCEEEEec
Confidence 3 667766543321 11222211 1222222 78999999988876
No 338
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.34 E-value=1.2e-10 Score=124.99 Aligned_cols=227 Identities=11% Similarity=0.105 Sum_probs=137.7
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc--e-eeccCCCCccccccccceEEec--CCeEEEEEec
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK--A-RPLFQSPDIYLNAIFDNFVWVN--NSTLLVCTIP 263 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~--~-~~lt~~~~~~~~~~~~~~~wsp--DG~~l~~~~~ 263 (958)
..+...+|||||++||.... ...|.+|+++++. . ..+..+.. .+..++|+| +|+.|+...
T Consensus 10 ~~V~~~~~s~~g~~las~s~---------D~~v~iw~~~~~~~~~~~~l~gH~~-----~V~~v~~s~~~~g~~l~s~s- 74 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSS---------DKTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCS- 74 (297)
T ss_dssp SCEEEEEECTTSSEEEEEET---------TSCEEEEEBCSSCBCCCEEECCCSS-----CEEEEEECCGGGCSEEEEEE-
T ss_pred CceEEEEECCCCCEEEEEeC---------CCEEEEEecCCCCcEEEEEEccccC-----CeEEEEecCCCcCCEEEEEc-
Confidence 46888999999999988652 5567778876542 2 23332222 277899986 488888662
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe---eeecCCC-ccccccc
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLD 338 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~ 338 (958)
....|.++++ +|+ ...+... ..+..++
T Consensus 75 ------------------------------------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~ 106 (297)
T 2pm7_B 75 ------------------------------------------------YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQ 106 (297)
T ss_dssp ------------------------------------------------TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEE
T ss_pred ------------------------------------------------CCCEEEEEEcCCCceEEEEEeecCCCceeEEE
Confidence 1234667777 653 2233333 6688999
Q ss_pred cCCC--CcEEEEEeecCCccccccCCCCCceeEEEeccCce-E--EEeccCCccccCcccccccccCcceeeeecCC---
Q 002164 339 PSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-V--RELCDLPLAEDIPIAFNSVRKGMRSINWRSDK--- 410 (958)
Q Consensus 339 ~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~--~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG--- 410 (958)
|+|| |+.|+..+. ++.+.+||+..+. . ..+. +....+..+.|+|++
T Consensus 107 ~~p~~~g~~l~s~s~-------------d~~v~~wd~~~~~~~~~~~~~-------------~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 107 WAPHEYGPMLLVASS-------------DGKVSVVEFKENGTTSPIIID-------------AHAIGVNSASWAPATIEE 160 (297)
T ss_dssp ECCGGGCSEEEEEET-------------TSEEEEEEBCSSSCBCCEEEE-------------CCSSCEEEEEECCCC---
T ss_pred eCcCCCCcEEEEEEC-------------CCcEEEEEecCCCceeeeeee-------------cccCccceEeecCCcccc
Confidence 9998 888887763 3489999987542 1 1111 122455788999974
Q ss_pred ----------CCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCc----eEEEeeccccCceeeecCC---ceEEEE
Q 002164 411 ----------PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP----EILHKLDLRYGGISWCDDS---LALVYE 473 (958)
Q Consensus 411 ----------~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~----~~l~~~~~~~~~~~~spDg---~~l~~~ 473 (958)
+.|+. .+..+.|.+|++ ..+... ..+..+...+..++|+|++ +.|+..
T Consensus 161 ~~~~~~~~~~~~l~s-------------gs~D~~v~lwd~--~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 161 DGEHNGTKESRKFVT-------------GGADNLVKIWKY--NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp ---------CCEEEE-------------EETTSCEEEEEE--ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred cccCCCCCCcceEEE-------------EcCCCcEEEEEE--cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 33333 144557888885 122221 2333455667889999996 666665
Q ss_pred EeccccceEEEEEcCCCCCCCcEEEe--ccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 474 SWYKTRRTRTWVISPGSKDVAPRILF--DRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 474 ~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
+.++. .+||.++...... ...+. ......++. ++|+|||++|+...
T Consensus 226 s~D~~--v~iWd~~~~~~~~-~~~~~~~~~~~~~v~~------~~~s~~g~~las~~ 273 (297)
T 2pm7_B 226 SQDRT--CIIWTQDNEQGPW-KKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 273 (297)
T ss_dssp ETTSC--EEEEEESSTTSCC-EEEESSSSCCSSCEEE------EEECSSSCCEEEEE
T ss_pred ECCCc--EEEEEeCCCCCcc-ceeeeecccCCCcEEE------EEECCCCCEEEEEc
Confidence 54443 6788776432211 11122 112222333 78999999998776
No 339
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.33 E-value=5.4e-11 Score=130.03 Aligned_cols=103 Identities=12% Similarity=0.113 Sum_probs=69.7
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCC-CceeeeccCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKL-GQEIEIQGFPDG 188 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~-~~~~~lt~~~~~ 188 (958)
.+..++|||||++||....+ +.|.+|++...... .....+.. ..
T Consensus 13 ~v~~~~~~~~~~~l~~~~~d---------------------------------g~i~iw~~~~~~~~~~~~~~~~~--~~ 57 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSD---------------------------------QHIKVFKLDKDTSNWELSDSWRA--HD 57 (351)
T ss_dssp CEEEEEECSSSSEEEEEETT---------------------------------SEEEEEEECSSSCCEEEEEEEEC--CS
T ss_pred ceeEEEEcCCCCEEEEeeCC---------------------------------CeEEEEECCCCCCcceecceecc--CC
Confidence 46788999999999988765 47899998642210 01222333 33
Q ss_pred CcccceeecC--CCCeEEEEEeeccccCCCCCceEEEEEcCCCce----------eeccCCCCccccccccceEEecC--
Q 002164 189 AKLNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA----------RPLFQSPDIYLNAIFDNFVWVNN-- 254 (958)
Q Consensus 189 ~~~~~~~wSP--DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~----------~~lt~~~~~~~~~~~~~~~wspD-- 254 (958)
..+....|+| ||+.|+.... ...|.+|++.+++. ..+..... .+..++|+|+
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~---------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~ 123 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASY---------DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG-----SLYSVKFAPAHL 123 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEET---------TSCEEEEEECTTSCTTSSCSEEEEEEECCCSS-----CEEEEEECCGGG
T ss_pred CcEEEEEEcCCCCCCEEEEEcC---------CCeEEEEecCCCcccccccCcceeeeecccCC-----ceeEEEEcCCCC
Confidence 4789999999 6998888652 45778888877632 22222222 2778999999
Q ss_pred CeEEEEE
Q 002164 255 STLLVCT 261 (958)
Q Consensus 255 G~~l~~~ 261 (958)
++.|+..
T Consensus 124 ~~~l~~~ 130 (351)
T 3f3f_A 124 GLKLACL 130 (351)
T ss_dssp CSEEEEE
T ss_pred CcEEEEe
Confidence 9988876
No 340
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.33 E-value=1.3e-12 Score=139.90 Aligned_cols=168 Identities=12% Similarity=0.065 Sum_probs=105.6
Q ss_pred HCCcEEEEcCCCCCCCCCCcc-cc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeE
Q 002164 710 ARGFAILGGPTTPIIGEGDEE-AN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCC 786 (958)
Q Consensus 710 ~~G~~vl~~~~~~~~G~G~~~-~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a 786 (958)
++||.|++ .+.+|+|.+. .. ........+|+.++++.+ ..+++.|+|||+||.+++.+|.++|+++++
T Consensus 67 ~~~~~vi~---~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 137 (292)
T 3l80_A 67 PDSIGILT---IDAPNSGYSPVSNQANVGLRDWVNAILMIFEHF------KFQSYLLCVHSIGGFAALQIMNQSSKACLG 137 (292)
T ss_dssp CTTSEEEE---ECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHS------CCSEEEEEEETTHHHHHHHHHHHCSSEEEE
T ss_pred hhcCeEEE---EcCCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEEchhHHHHHHHHHhCchheee
Confidence 37999999 5666888776 22 122455566665555443 335899999999999999999999999999
Q ss_pred EEEeccC---------CCCCCCC----CCcccc----------cchhh----------h----cHHHHHhcCc-------
Q 002164 787 GIARSGA---------YNRTLTP----FGFQNE----------DRTLW----------E----ATSTYVEMSP------- 822 (958)
Q Consensus 787 ~v~~~~~---------~~~~~~~----~~~~~~----------~~~~~----------~----~~~~~~~~sp------- 822 (958)
+|++++. ....... ...... ....| . ....+....+
T Consensus 138 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (292)
T 3l80_A 138 FIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIR 217 (292)
T ss_dssp EEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSS
T ss_pred EEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchh
Confidence 9999843 2100000 000000 00000 0 0011111222
Q ss_pred --------ccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 002164 823 --------FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWL 894 (958)
Q Consensus 823 --------~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl 894 (958)
...+.+ ++|+|+++|++|..++ +. + ++.+.+. ..+ +++++++|.+. .++...+.+.+.+||
T Consensus 218 ~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~--~~-~-~~~~~~~----~~~-~~~~~~gH~~~-~e~p~~~~~~i~~fl 286 (292)
T 3l80_A 218 LALGEEDFKTGISE-KIPSIVFSESFREKEY--LE-S-EYLNKHT----QTK-LILCGQHHYLH-WSETNSILEKVEQLL 286 (292)
T ss_dssp CCCCGGGGCCCCCT-TSCEEEEECGGGHHHH--HT-S-TTCCCCT----TCE-EEECCSSSCHH-HHCHHHHHHHHHHHH
T ss_pred hhhcchhhhhccCC-CCCEEEEEccCccccc--hH-H-HHhccCC----Cce-eeeCCCCCcch-hhCHHHHHHHHHHHH
Confidence 123445 7999999999999886 55 4 4443332 245 88999999864 456778888999999
Q ss_pred HHh
Q 002164 895 QKY 897 (958)
Q Consensus 895 ~~~ 897 (958)
+++
T Consensus 287 ~~~ 289 (292)
T 3l80_A 287 SNH 289 (292)
T ss_dssp HTC
T ss_pred Hhc
Confidence 875
No 341
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.33 E-value=3.6e-10 Score=140.03 Aligned_cols=169 Identities=7% Similarity=0.014 Sum_probs=99.6
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~ 411 (958)
..+..++|||||+.|+..+.+ +.|.+||+.++..+........ .......+....+..++|||||+
T Consensus 436 ~~v~sv~~spdg~~laSgs~D-------------gtVrlWd~~~g~~~~~~~~~~~-l~~~~~~~h~~~V~svafspdg~ 501 (902)
T 2oaj_A 436 RTKRQKLPAEYGTAFITGHSN-------------GSVRIYDASHGDIQDNASFEVN-LSRTLNKAKELAVDKISFAAETL 501 (902)
T ss_dssp CCCCCCCCCSEEEEEEEEETT-------------SEEEEEESSCCTTTTTBCEEEE-HHHHTTCSSSCCEEEEEEETTTT
T ss_pred CCCCcccccccCcEEEEecCC-------------CcEEEEECCCccccCCceEEee-chhhcCCCCCCceeEEEecCCCC
Confidence 445678999999999887743 4899999986632110000000 00000002224568899999999
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC--------------------------------------------
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-------------------------------------------- 447 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-------------------------------------------- 447 (958)
.|+.- +..+.|.+|++ ++++
T Consensus 502 ~LAsg-------------s~DgtV~lwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 502 ELAVS-------------IETGDVVLFKY---EVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp EEEEE-------------ETTSCEEEEEE---EECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred eEEEE-------------ecCcEEEEEEe---cCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 88873 34556777765 2221
Q ss_pred --ceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEe--c------cCCccccCCCCCCceEe
Q 002164 448 --PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILF--D------RSSEDVYSDPGSPMMRR 517 (958)
Q Consensus 448 --~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~ 517 (958)
...+..+...+..++||||| .|+..+.++. |.++|+.++ ..+. . .....+.+ +.|
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~t----v~lwd~~~~----~~~~~~~~~~~~~gh~~~V~s------v~F 630 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGS----LMLIDRRGP----AIIYMENIREISGAQSACVTC------IEF 630 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS-EEEEEETTSE----EEEEETTTT----EEEEEEEGGGTCSSCCCCEEE------EEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCc----EEEEECCCC----eEEEEeehhHhccccccceEE------EEE
Confidence 12233456678889999999 8887765433 444555553 2221 1 22233343 789
Q ss_pred c-----cCC---ceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEEC---CCCceEE
Q 002164 518 T-----STG---TYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDI---NTGSKER 566 (958)
Q Consensus 518 s-----pdG---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl---~~g~~~~ 566 (958)
| ||| ++|+....+ ..|.+||+ .+|+...
T Consensus 631 s~~~~~~Dg~~~~~l~sgs~D---------------------~tv~~wd~~p~~~g~~~~ 669 (902)
T 2oaj_A 631 VIMEYGDDGYSSILMVCGTDM---------------------GEVITYKILPASGGKFDV 669 (902)
T ss_dssp EEEECTTSSSEEEEEEEEETT---------------------SEEEEEEEEECGGGCEEE
T ss_pred EEEecCCCCCcceEEEEEecC---------------------CcEEEEEEecCCCCcEEE
Confidence 9 886 777776632 25888888 6666543
No 342
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.32 E-value=9e-10 Score=124.54 Aligned_cols=281 Identities=13% Similarity=0.136 Sum_probs=171.2
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
+.+...||+++ .||... ...|++||+.+|+..++...... ...+..++|+|||++|+...
T Consensus 107 y~~~l~wS~~n-~lAvgl----------d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasgs------- 166 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVAL----------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGT------- 166 (420)
T ss_dssp TCBCEEECTTS-EEEEEE----------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEE-------
T ss_pred cceeEEECCCC-EEEEEe----------CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEEE-------
Confidence 56678999864 666643 45899999999988766543221 11277999999999999762
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDGk~l 346 (958)
....|.++++ +++. +.+... ..+.. +++|++.|
T Consensus 167 ------------------------------------------~Dg~v~iWd~~~~~~~~~~~~h~~~v~~--~s~~~~~l 202 (420)
T 4gga_A 167 ------------------------------------------SSAEVQLWDVQQQKRLRNMTSHSARVGS--LSWNSYIL 202 (420)
T ss_dssp ------------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEE--EEEETTEE
T ss_pred ------------------------------------------CCCeEEEEEcCCCcEEEEEeCCCCceEE--EeeCCCEE
Confidence 2234777787 6654 333333 44444 45577877
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCce--EEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~--~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
+..+. ++.+.+|+..... ...+..+. ..+..+.|+|+|+.++..
T Consensus 203 ~sgs~-------------d~~i~~~d~~~~~~~~~~~~~h~-------------~~~~~~~~~~~g~~l~s~-------- 248 (420)
T 4gga_A 203 SSGSR-------------SGHIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRHLASG-------- 248 (420)
T ss_dssp EEEET-------------TSEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSEEEEE--------
T ss_pred EEEeC-------------CCceeEeeecccceeeEEecccc-------------cceeeeeecCCCCeeeee--------
Confidence 76653 3478899887432 22222221 344678899999987763
Q ss_pred cccccccCCeEEEEeCCCCCCCC----ceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEec
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEG----PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFD 500 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~----~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 500 (958)
...+.+.+++. ..+.. ..........+..+.|+|++..+++....... ..|.++++.++ .......
T Consensus 249 -----~~D~~v~i~~~--~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D-~~I~iwd~~t~--~~~~~~~ 318 (420)
T 4gga_A 249 -----GNDNLVNVWPS--APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD-RHIRIWNVCSG--ACLSAVD 318 (420)
T ss_dssp -----ETTSCEEEEES--SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT-CEEEEEETTTT--EEEEEEE
T ss_pred -----eccccceEEee--ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC-CEEEEEeCCcc--ccceeec
Confidence 44567888885 22221 22334455667789999998887765432211 34566666664 2222222
Q ss_pred cCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeE
Q 002164 501 RSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTV 580 (958)
Q Consensus 501 ~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~ 580 (958)
... .+.. ..|+|+++.++..... ....|++||+.+++......+... .+.
T Consensus 319 ~~~-~v~~------~~~~~~~~~lv~~sg~-------------------~d~~I~iwd~~~~~~v~~l~gH~~----~V~ 368 (420)
T 4gga_A 319 AHS-QVCS------ILWSPHYKELISGHGF-------------------AQNQLVIWKYPTMAKVAELKGHTS----RVL 368 (420)
T ss_dssp CSS-CEEE------EEEETTTTEEEEEECT-------------------TTCCEEEEETTTCCEEEEECCCSS----CEE
T ss_pred ccc-ceee------eeecCCCCeEEEEEec-------------------CCCEEEEEECCCCcEEEEEcCCCC----CEE
Confidence 221 1222 6799999988876511 112599999998876655443221 122
Q ss_pred eecCCCccccccccCCEEEEEEecCCCCceEEEEECCCC
Q 002164 581 ALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDK 619 (958)
Q Consensus 581 ~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g 619 (958)
..+|+|||+.|+.... ...|.+|++.+.
T Consensus 369 -------~l~~spdg~~l~S~s~----D~tvriWdv~~~ 396 (420)
T 4gga_A 369 -------SLTMSPDGATVASAAA----DETLRLWRCFEL 396 (420)
T ss_dssp -------EEEECTTSSCEEEEET----TTEEEEECCSCS
T ss_pred -------EEEEcCCCCEEEEEec----CCeEEEEECCCC
Confidence 2478999987654322 245888887543
No 343
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.30 E-value=1.8e-10 Score=127.07 Aligned_cols=289 Identities=12% Similarity=0.090 Sum_probs=166.8
Q ss_pred CcccceeecCC---CCeEEEEEeeccccCCCCCceEEEEEcCCCcee-eccCCCCccccccccceEEecC----CeEEEE
Q 002164 189 AKLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR-PLFQSPDIYLNAIFDNFVWVNN----STLLVC 260 (958)
Q Consensus 189 ~~~~~~~wSPD---G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspD----G~~l~~ 260 (958)
..+...+|+|+ ++.++++... ...|.+|+..+++.. .+...........+..++|+|+ |++|+.
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~--------~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVG--------SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEE--------TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCCCceEEEECC--------CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 46888999985 6655555431 337888888865543 3321111101122678999999 677876
Q ss_pred EecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-cccccc
Q 002164 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSL 337 (958)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~ 337 (958)
.. ..+.|.++++ +++. ..+... ..+..+
T Consensus 91 ~~-------------------------------------------------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 91 AG-------------------------------------------------SRGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EE-------------------------------------------------TTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred ec-------------------------------------------------CCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 61 2345778888 6643 344433 778899
Q ss_pred ccCC-CCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEE-eccCCccccCcccccccccCcceeeeecCCCCceE
Q 002164 338 DPSP-DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 338 ~~Sp-DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
.|+| |++.|+..+. ++.|.+||+..++... +.... .....+..+.|+|||+.++.
T Consensus 122 ~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~ 178 (366)
T 3k26_A 122 KFHPRDPNLLLSVSK-------------DHALRLWNIQTDTLVAIFGGVE----------GHRDEVLSADYDLLGEKIMS 178 (366)
T ss_dssp EECSSCTTEEEEEET-------------TSCEEEEETTTTEEEEEECSTT----------SCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCCCEEEEEeC-------------CCeEEEEEeecCeEEEEecccc----------cccCceeEEEECCCCCEEEE
Confidence 9999 8998887763 3489999998655433 32111 11145678999999998776
Q ss_pred EEEeccCCCcccccccCCeEEEEeCCCCCCCCc-eEE----------------------------EeeccccCceeeecC
Q 002164 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EIL----------------------------HKLDLRYGGISWCDD 466 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l----------------------------~~~~~~~~~~~~spD 466 (958)
. +..+.|.+|++ ..++. ..+ ......+..+.|+
T Consensus 179 ~-------------~~dg~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 179 C-------------GMDHSLKLWRI---NSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp E-------------ETTSCEEEEES---CSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred e-------------cCCCCEEEEEC---CCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 3 34567888885 32211 111 0144556778888
Q ss_pred CceEEEEEeccccceEEEEEcCCCCC--------C--CcEEEeccCCccccCCCCCCceEeccC--CceEEEEeeeccCC
Q 002164 467 SLALVYESWYKTRRTRTWVISPGSKD--------V--APRILFDRSSEDVYSDPGSPMMRRTST--GTYVIAKIKKENDE 534 (958)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~spd--G~~l~~~~~~~~~~ 534 (958)
++.|+.....+. ..+|.+...... . ............+.. +.|+|| |++|+....+
T Consensus 241 ~~~l~~~~~d~~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~s~~~~~~~l~~~~~d---- 308 (366)
T 3k26_A 241 GDLILSKSCENA--IVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWY------MRFSMDFWQKMLALGNQV---- 308 (366)
T ss_dssp TTEEEEECSSSE--EEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSC------CCCEECTTSSEEEEECTT----
T ss_pred CCEEEEEecCCE--EEEEeCCCccccccccccCCcchheeccccccCCcEEE------EEEcCCCCCcEEEEEecC----
Confidence 666666544322 555555432210 0 011222222223333 678999 9988877521
Q ss_pred CcEEEEccCCCCCCCCCCeEEEEECCCCceEE----EecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCce
Q 002164 535 GTYILLNGNGATPEGNIPFLDLFDINTGSKER----IWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQ 610 (958)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~ 610 (958)
..|++||+.+++... ....... ...+. ..+|++|++.++.... ...
T Consensus 309 -----------------g~i~vwd~~~~~~~~~~~~~~~~~~~--~~~v~-------~~~~s~~~~~l~s~~~----dg~ 358 (366)
T 3k26_A 309 -----------------GKLYVWDLEVEDPHKAKCTTLTHHKC--GAAIR-------QTSFSRDSSILIAVCD----DAS 358 (366)
T ss_dssp -----------------SCEEEEECCSSSGGGCEEEEECCTTC--CSCEE-------EEEECTTSSEEEEEET----TSE
T ss_pred -----------------CcEEEEECCCCCCccccceEEccccc--CCceE-------EEEeCCCCCeEEEEeC----CCE
Confidence 259999998875321 1211100 00112 2578999987765443 245
Q ss_pred EEEEECC
Q 002164 611 YYIQSWP 617 (958)
Q Consensus 611 ~~~~d~~ 617 (958)
+++|++.
T Consensus 359 i~iwd~~ 365 (366)
T 3k26_A 359 IWRWDRL 365 (366)
T ss_dssp EEEEEC-
T ss_pred EEEEEec
Confidence 7787753
No 344
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.30 E-value=1.2e-09 Score=122.50 Aligned_cols=292 Identities=8% Similarity=0.039 Sum_probs=166.3
Q ss_pred CCcccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCC---------CccccccccceEEec-CCe
Q 002164 188 GAKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSP---------DIYLNAIFDNFVWVN-NST 256 (958)
Q Consensus 188 ~~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~---------~~~~~~~~~~~~wsp-DG~ 256 (958)
...+...+|+| ||+.|+.... ...|.+|++.+++........ .......+..++|+| +++
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGS---------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEET---------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred CCcEEEEEEecCCCCEEEEEcC---------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 35789999999 9999988652 557888898877654332100 000112277899999 666
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccc
Q 002164 257 LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVY 334 (958)
Q Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~ 334 (958)
.|+... ....|.++++ +++....... ..+
T Consensus 114 ~l~s~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (408)
T 4a11_B 114 MFTSSS-------------------------------------------------FDKTLKVWDTNTLQTADVFNFEETV 144 (408)
T ss_dssp CEEEEE-------------------------------------------------TTSEEEEEETTTTEEEEEEECSSCE
T ss_pred EEEEEe-------------------------------------------------CCCeEEEeeCCCCccceeccCCCce
Confidence 777551 2345778888 6654433322 455
Q ss_pred cccccCC---CCcEEEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccccCcccccccccCcceeeeecCC
Q 002164 335 TSLDPSP---DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (958)
Q Consensus 335 ~~~~~Sp---DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG 410 (958)
....|+| +++.|+.... .+.+.+||+..+. ...+..+ ...+..+.|+|||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~ 198 (408)
T 4a11_B 145 YSHHMSPVSTKHCLVAVGTR-------------GPKVQLCDLKSGSCSHILQGH-------------RQEILAVSWSPRY 198 (408)
T ss_dssp EEEEECSSCSSCCEEEEEES-------------SSSEEEEESSSSCCCEEECCC-------------CSCEEEEEECSSC
T ss_pred eeeEeecCCCCCcEEEEEcC-------------CCeEEEEeCCCcceeeeecCC-------------CCcEEEEEECCCC
Confidence 6667777 4447776663 3489999998543 3333221 1345789999999
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEeCCCCCCC-CceEE---------------EeeccccCceeeecCCceEEEEE
Q 002164 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE-GPEIL---------------HKLDLRYGGISWCDDSLALVYES 474 (958)
Q Consensus 411 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~l---------------~~~~~~~~~~~~spDg~~l~~~~ 474 (958)
+.+++.. +..+.|.+|++ ..+. ....+ ......+..+.|+|||+.|+...
T Consensus 199 ~~ll~~~------------~~dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 199 DYILATA------------SADSRVKLWDV--RRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp TTEEEEE------------ETTSCEEEEET--TCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEE------------cCCCcEEEEEC--CCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 9855531 34557888886 2222 22222 23344567789999999988776
Q ss_pred eccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEe-ccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCe
Q 002164 475 WYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPF 553 (958)
Q Consensus 475 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (958)
..+. |.++++.++.. ............. ....+.+ ...+..+++... ...
T Consensus 265 ~dg~----i~vwd~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---------------------~~~ 315 (408)
T 4a11_B 265 TDNR----MRLWNSSNGEN--TLVNYGKVCNNSK--KGLKFTVSCGCSSEFVFVPY---------------------GST 315 (408)
T ss_dssp TTSC----EEEEETTTCCB--CCCCCCCCCCCCS--SCCCCEECCSSSSCEEEEEE---------------------TTE
T ss_pred CCCe----EEEEECCCCcc--ceecccccccccc--ccceeEEecCCCceEEEEec---------------------CCE
Confidence 4432 55556555421 1111110000000 0001112 222333444331 126
Q ss_pred EEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002164 554 LDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (958)
Q Consensus 554 L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~ 621 (958)
|++||+.+++.......... .+. ..+|++|++.++.... ...+.++++.+++.
T Consensus 316 i~v~d~~~~~~~~~~~~~~~----~v~-------~~~~s~~~~~l~s~~~----dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 316 IAVYTVYSGEQITMLKGHYK----TVD-------CCVFQSNFQELYSGSR----DCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTTCCEEEEECCCSS----CEE-------EEEEETTTTEEEEEET----TSCEEEEEECC---
T ss_pred EEEEECcCCcceeeeccCCC----eEE-------EEEEcCCCCEEEEECC----CCeEEEEeCCCCCc
Confidence 99999998887666543322 122 2578999987765443 24588888877653
No 345
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.28 E-value=1.5e-09 Score=124.43 Aligned_cols=256 Identities=12% Similarity=0.091 Sum_probs=154.4
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~ 242 (958)
+.|.+|++.+ + .....+.+ +...+....|+||+ .|+... ....|.+|++.+++...........
T Consensus 142 g~i~vwd~~~-~--~~~~~~~~--h~~~V~~l~~~~~~-~l~s~s---------~dg~i~vwd~~~~~~~~~~~~h~~~- 205 (464)
T 3v7d_B 142 KMIRVYDSIN-K--KFLLQLSG--HDGGVWALKYAHGG-ILVSGS---------TDRTVRVWDIKKGCCTHVFEGHNST- 205 (464)
T ss_dssp SCEEEEETTT-T--EEEEEECC--CSSCEEEEEECSTT-EEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC-
T ss_pred CcEEEEECCC-C--cEEEEEeC--CCcCEEEEEEcCCC-EEEEEe---------CCCCEEEEECCCCcEEEEECCCCCc-
Confidence 5799999854 2 23344443 33578999999998 555533 2567899999988766554433322
Q ss_pred cccccceEEe--cCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEE
Q 002164 243 NAIFDNFVWV--NNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVS 320 (958)
Q Consensus 243 ~~~~~~~~ws--pDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~ 320 (958)
+..++|+ ++++.|+....+. .|.+++
T Consensus 206 ---v~~l~~~~~~~~~~l~s~s~d~-------------------------------------------------~i~vwd 233 (464)
T 3v7d_B 206 ---VRCLDIVEYKNIKYIVTGSRDN-------------------------------------------------TLHVWK 233 (464)
T ss_dssp ---EEEEEEEESSSCEEEEEEETTS-------------------------------------------------CEEEEE
T ss_pred ---cEEEEEecCCCCCEEEEEcCCC-------------------------------------------------cEEEee
Confidence 6677888 6888888763221 122222
Q ss_pred c-CCe------------------------eeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc
Q 002164 321 L-DGT------------------------VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (958)
Q Consensus 321 ~-~g~------------------------~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~ 374 (958)
+ ++. ...+... ..+ .+++++|+.|+..+.+ +.|.+||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d-------------~~i~vwd~~ 298 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYD-------------NTLIVWDVA 298 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE--EEEEEETTEEEEEETT-------------SCEEEEETT
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE--EEEcCCCCEEEEEeCC-------------CeEEEEECC
Confidence 2 111 1111111 222 2457899999888743 489999998
Q ss_pred CceEE-EeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe
Q 002164 375 GIFVR-ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK 453 (958)
Q Consensus 375 ~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~ 453 (958)
++... .+..+ ...+..+.|+|||+.++.. +..+.|++|++ ..+.....+..
T Consensus 299 ~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~sg-------------~~dg~i~vwd~--~~~~~~~~~~~ 350 (464)
T 3v7d_B 299 QMKCLYILSGH-------------TDRIYSTIYDHERKRCISA-------------SMDTTIRIWDL--ENGELMYTLQG 350 (464)
T ss_dssp TTEEEEEECCC-------------SSCEEEEEEETTTTEEEEE-------------ETTSCEEEEET--TTTEEEEEECC
T ss_pred CCcEEEEecCC-------------CCCEEEEEEcCCCCEEEEE-------------eCCCcEEEEEC--CCCcEEEEEeC
Confidence 65433 33221 1445789999999987763 44567999996 23333344445
Q ss_pred eccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccC
Q 002164 454 LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKEND 533 (958)
Q Consensus 454 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~ 533 (958)
+...+..+.|+ ++.|+..+.++ .|.++++.++ ........ ... .....|+++|+.|+....
T Consensus 351 h~~~v~~~~~~--~~~l~s~s~dg----~v~vwd~~~~--~~~~~~~~-~~~------~~~~~~~~~~~~l~~~~d---- 411 (464)
T 3v7d_B 351 HTALVGLLRLS--DKFLVSAAADG----SIRGWDANDY--SRKFSYHH-TNL------SAITTFYVSDNILVSGSE---- 411 (464)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTS----EEEEEETTTC--CEEEEEEC-TTC------CCEEEEEECSSEEEEEET----
T ss_pred CCCcEEEEEEc--CCEEEEEeCCC----cEEEEECCCC--ceeeeecC-CCC------ccEEEEEeCCCEEEEecC----
Confidence 55566777776 56666655433 3555666653 22222211 111 112678999998876641
Q ss_pred CCcEEEEccCCCCCCCCCCeEEEEECCCCceEE
Q 002164 534 EGTYILLNGNGATPEGNIPFLDLFDINTGSKER 566 (958)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~ 566 (958)
..|.+||+.+|+..+
T Consensus 412 ------------------g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 412 ------------------NQFNIYNLRSGKLVH 426 (464)
T ss_dssp ------------------TEEEEEETTTCCEEE
T ss_pred ------------------CeEEEEECCCCcEEe
Confidence 259999999988765
No 346
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.27 E-value=6.1e-09 Score=120.98 Aligned_cols=324 Identities=9% Similarity=0.001 Sum_probs=178.9
Q ss_pred eceeEEEccCCCCCCc-eeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcC--CCceeeccCCCC
Q 002164 163 TGIGIHQLFPDGKLGQ-EIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD--TGKARPLFQSPD 239 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~-~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~--~g~~~~lt~~~~ 239 (958)
+.|+++|..+ ++ ..++ +.+.....+.+||||++++.... ...|+++|+. +++...-.....
T Consensus 177 ~~V~viD~~t----~~v~~~i---~~g~~p~~v~~SpDGr~lyv~~~---------dg~V~viD~~~~t~~~v~~i~~G~ 240 (567)
T 1qks_A 177 GQIALIDGST----YEIKTVL---DTGYAVHISRLSASGRYLFVIGR---------DGKVNMIDLWMKEPTTVAEIKIGS 240 (567)
T ss_dssp TEEEEEETTT----CCEEEEE---ECSSCEEEEEECTTSCEEEEEET---------TSEEEEEETTSSSCCEEEEEECCS
T ss_pred CeEEEEECCC----CeEEEEE---eCCCCccceEECCCCCEEEEEcC---------CCeEEEEECCCCCCcEeEEEecCC
Confidence 3688888744 32 2233 23344568899999998776541 3479999995 554432222122
Q ss_pred ccccccccceEEe----cCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcce
Q 002164 240 IYLNAIFDNFVWV----NNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQ 315 (958)
Q Consensus 240 ~~~~~~~~~~~ws----pDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~ 315 (958)
. ...+++| |||++++++.. ...+
T Consensus 241 ~-----P~~ia~s~~~~pDGk~l~v~n~------------------------------------------------~~~~ 267 (567)
T 1qks_A 241 E-----ARSIETSKMEGWEDKYAIAGAY------------------------------------------------WPPQ 267 (567)
T ss_dssp E-----EEEEEECCSTTCTTTEEEEEEE------------------------------------------------ETTE
T ss_pred C-----CceeEEccccCCCCCEEEEEEc------------------------------------------------cCCe
Confidence 1 4478999 79999997710 1244
Q ss_pred EEEEEc-CCeeee-cCCC------------ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEe
Q 002164 316 LVLVSL-DGTVKE-IGPP------------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVREL 381 (958)
Q Consensus 316 l~~~~~-~g~~~~-l~~~------------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l 381 (958)
+.++|. +.+... +... ..+..+..|+++..+++.... .++|+++|........+
T Consensus 268 v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~------------~g~v~~vd~~~~~~~~v 335 (567)
T 1qks_A 268 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE------------TGKILLVDYTDLNNLKT 335 (567)
T ss_dssp EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEETTCSSEEEE
T ss_pred EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC------------CCeEEEEecCCCcccee
Confidence 666676 553322 2111 123456678888776665522 45899998874322222
Q ss_pred ccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee--ccc--
Q 002164 382 CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLR-- 457 (958)
Q Consensus 382 ~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~-- 457 (958)
+..+.. .....+.|+|||++++... ...+.|.++|. ..++....... ...
T Consensus 336 ~~i~~~-----------~~~~d~~~~pdgr~~~va~------------~~sn~V~ViD~---~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 336 TEISAE-----------RFLHDGGLDGSHRYFITAA------------NARNKLVVIDT---KEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp EEEECC-----------SSEEEEEECTTSCEEEEEE------------GGGTEEEEEET---TTTEEEEEEECSSSSBCC
T ss_pred eeeecc-----------ccccCceECCCCCEEEEEe------------CCCCeEEEEEC---CCCcEEEEEeccCcCCCC
Confidence 221111 2235678999999877741 23567889996 44443333222 111
Q ss_pred cCcee-eecCCceEEEEEeccccceEEEEEcCCCCCC-----CcEEEeccCCccccCCCCCCceEeccCCceEEEEeeec
Q 002164 458 YGGIS-WCDDSLALVYESWYKTRRTRTWVISPGSKDV-----APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKE 531 (958)
Q Consensus 458 ~~~~~-~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~ 531 (958)
.+.+. +.|++..++++.+.+. ..|.+++.+.... +.......... +...+..+|||++|+.....
T Consensus 390 g~g~~~~~p~~g~v~~t~~~g~--~~Vsvid~~~~~~~~~~~kvv~~i~~~g~------g~~~i~~~p~~~~l~v~~~~- 460 (567)
T 1qks_A 390 GRGANFVHPTFGPVWATSHMGD--DSVALIGTDPEGHPDNAWKILDSFPALGG------GSLFIKTHPNSQYLYVDATL- 460 (567)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS--SEEEEEECCTTTCTTTBTSEEEEEECSCS------CCCCEECCTTCSEEEEECTT-
T ss_pred ccceeeECCCCCcEEEeCCCCC--CeEEEecCCCCCCccccCEEEEEEecCCC------CCEEEEeCCCCCeEEEecCC-
Confidence 13444 4788888776665443 3477777765311 11111111111 12226679999987765410
Q ss_pred cCCCcEEEEccCCCCCCC-CCCeEEEEECCCC-----ce--EEEecCCcccc---cceeEeecCCCccccccccCCEEEE
Q 002164 532 NDEGTYILLNGNGATPEG-NIPFLDLFDINTG-----SK--ERIWESDKEKY---YETTVALMSDQTEGDLYLNQLKILT 600 (958)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~-~~~~L~~~dl~~g-----~~--~~l~~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~ 600 (958)
.++. ....|.++|+++. .. +.+.-.++... -..+. .+.|++||+++++
T Consensus 461 --------------~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~G~~~~~ 519 (567)
T 1qks_A 461 --------------NPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV-------QGEFNKDGTEVWF 519 (567)
T ss_dssp --------------CSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE-------EEEECTTSSEEEE
T ss_pred --------------CCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE-------eeeECCCCCEEEE
Confidence 0000 0235889998765 11 22311100000 00111 2579999999999
Q ss_pred EEecC-CCCceEEEEECCCCCeeE
Q 002164 601 SKESK-TENTQYYIQSWPDKKSCQ 623 (958)
Q Consensus 601 ~~~s~-~~p~~~~~~d~~~g~~~~ 623 (958)
+..+. .....|.++|..+++.+.
T Consensus 520 s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 520 SVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp EEECCTTSCCEEEEEETTTTEEEE
T ss_pred EeecCCCCCCcEEEEECCCceEEE
Confidence 87643 356789999988876543
No 347
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.25 E-value=3.3e-10 Score=128.58 Aligned_cols=243 Identities=11% Similarity=0.230 Sum_probs=147.7
Q ss_pred CCCCCceecCCC-CEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCC-------CCCCcee
Q 002164 109 PPLPALSFSPQR-DKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPD-------GKLGQEI 180 (958)
Q Consensus 109 ~~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~d-------g~~~~~~ 180 (958)
..+..++|+|++ +.||....+ +.|.+|++... +......
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~d---------------------------------g~V~vwd~~~~~~~~~~~~~~~~~~ 175 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPS---------------------------------SDVLVFDYTKHPSKPEPSGECQPDL 175 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSS---------------------------------SCEEEEEGGGSCSSCCTTCCCCCSE
T ss_pred CcEEEEEECCCCCcEEEEECCC---------------------------------CcEEEEECCCcccccCccccCCCcE
Confidence 367889999984 455544433 47899998541 2123334
Q ss_pred eeccCCCCCcccceeecCCCC-eEEEEEeeccccCCCCCceEEEEEcCCCce--------eeccCCCCccccccccceEE
Q 002164 181 EIQGFPDGAKLNFVTWSQDGK-HLAFSIRIDAEDSSSSKLRVWVADVDTGKA--------RPLFQSPDIYLNAIFDNFVW 251 (958)
Q Consensus 181 ~lt~~~~~~~~~~~~wSPDG~-~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~--------~~lt~~~~~~~~~~~~~~~w 251 (958)
.+.. +...+....|+|+++ .|+... ....|.+|++..+.. ..+..... .+..++|
T Consensus 176 ~~~~--h~~~v~~l~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~-----~v~~v~~ 239 (430)
T 2xyi_A 176 RLRG--HQKEGYGLSWNPNLNGYLLSAS---------DDHTICLWDINATPKEHRVIDAKNIFTGHTA-----VVEDVAW 239 (430)
T ss_dssp EEEC--CSSCCCCEEECTTSTTEEEEEC---------TTSCEEEEETTSCCBGGGEEECSEEECCCSS-----CEEEEEE
T ss_pred EecC--CCCCeEEEEeCCCCCCeEEEEe---------CCCeEEEEeCCCCCCCCceeccceeecCCCC-----CEeeeEE
Confidence 4443 334689999999999 555532 356788888876321 11222121 2778999
Q ss_pred ec-CCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC----ee
Q 002164 252 VN-NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG----TV 325 (958)
Q Consensus 252 sp-DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g----~~ 325 (958)
+| ++..|+... ....|.++++ ++ ..
T Consensus 240 ~p~~~~~l~s~~-------------------------------------------------~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 240 HLLHESLFGSVA-------------------------------------------------DDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp CSSCTTEEEEEE-------------------------------------------------TTSEEEEEETTCSCSSSCS
T ss_pred eCCCCCEEEEEe-------------------------------------------------CCCeEEEEECCCCCCCcce
Confidence 99 455555441 2345778887 54 22
Q ss_pred eecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC-ce-EEEeccCCccccCcccccccccCcc
Q 002164 326 KEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IF-VRELCDLPLAEDIPIAFNSVRKGMR 402 (958)
Q Consensus 326 ~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~-~~-~~~l~~~~~~~~~p~~~~~~~~~~~ 402 (958)
..+... ..+..++|+|+|++++++... ++.|.+||+.. +. ...+..+ ...+.
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~------------dg~v~vwd~~~~~~~~~~~~~h-------------~~~v~ 325 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSA------------DKTVALWDLRNLKLKLHSFESH-------------KDEIF 325 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEET------------TSEEEEEETTCTTSCSEEEECC-------------SSCEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeC------------CCeEEEEeCCCCCCCeEEeecC-------------CCCEE
Confidence 333333 678899999999976655533 34899999985 22 2222221 14567
Q ss_pred eeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCC---------CceEE---EeeccccCceeeecCCceE
Q 002164 403 SINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE---------GPEIL---HKLDLRYGGISWCDDSLAL 470 (958)
Q Consensus 403 ~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~---------~~~~l---~~~~~~~~~~~~spDg~~l 470 (958)
.+.|+|+|+.+++.. +..+.|.+|++...... ....+ ..+...+..+.|+|+++++
T Consensus 326 ~i~~sp~~~~~l~s~------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 393 (430)
T 2xyi_A 326 QVQWSPHNETILASS------------GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWI 393 (430)
T ss_dssp EEEECSSCTTEEEEE------------ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTE
T ss_pred EEEECCCCCCEEEEE------------eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCE
Confidence 899999998866641 33557888886211100 01223 2234457789999999966
Q ss_pred EEEEeccccceEEEEEc
Q 002164 471 VYESWYKTRRTRTWVIS 487 (958)
Q Consensus 471 ~~~~~~~~~~~~l~~~~ 487 (958)
+++...++ ..++|.++
T Consensus 394 l~s~s~dg-~i~iw~~~ 409 (430)
T 2xyi_A 394 ICSVSEDN-IMQVWQMA 409 (430)
T ss_dssp EEEEETTS-EEEEEEEC
T ss_pred EEEEECCC-CEEEeEcc
Confidence 65555443 25677664
No 348
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.25 E-value=2.1e-10 Score=124.26 Aligned_cols=242 Identities=13% Similarity=0.088 Sum_probs=135.9
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCcee---eccCCCCccccccccceEEec--CCeEEEEEec
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR---PLFQSPDIYLNAIFDNFVWVN--NSTLLVCTIP 263 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~---~lt~~~~~~~~~~~~~~~wsp--DG~~l~~~~~ 263 (958)
..+...+|+|||++||.... ...|.+|++.++... .+..+.. .+..++|+| +|+.|+...
T Consensus 14 ~~V~~v~~s~~g~~lasgs~---------D~~v~lwd~~~~~~~~~~~l~gH~~-----~V~~v~~~~~~~~~~l~s~s- 78 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSS---------DRSVKIFDVRNGGQILIADLRGHEG-----PVWQVAWAHPMYGNILASCS- 78 (316)
T ss_dssp CCEEEEEECGGGCEEEEEET---------TTEEEEEEEETTEEEEEEEEECCSS-----CEEEEEECCGGGSSCEEEEE-
T ss_pred CeEEEeeEcCCCCEEEEEeC---------CCeEEEEEecCCCcEEEEEEcCCCc-----cEEEEEeCCCCCCCEEEEEE-
Confidence 46888999999999988652 557788888776432 2222222 277899985 488888662
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe---eeecCCC-ccccccc
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLD 338 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~ 338 (958)
....|.++++ +++ ...+... ..+..++
T Consensus 79 ------------------------------------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~ 110 (316)
T 3bg1_A 79 ------------------------------------------------YDRKVIIWREENGTWEKSHEHAGHDSSVNSVC 110 (316)
T ss_dssp ------------------------------------------------TTSCEEEECCSSSCCCEEEEECCCSSCCCEEE
T ss_pred ------------------------------------------------CCCEEEEEECCCCcceEEEEccCCCCceEEEE
Confidence 1234666676 553 2233333 6788999
Q ss_pred cCCC--CcEEEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccccCcccccccccCcceeeeecCCCCceE
Q 002164 339 PSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 339 ~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
|+|| |+.|+..+. ++.+.+|++.++. ...+.... .....+..+.|+|++..--+
T Consensus 111 ~~p~~~g~~lasgs~-------------D~~i~lwd~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 111 WAPHDYGLILACGSS-------------DGAISLLTYTGEGQWEVKKINN----------AHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp ECCTTTCSCEEEECS-------------SSCEEEEEECSSSCEEECCBTT----------SSSSCBCCCEECCCCCC---
T ss_pred ECCCCCCcEEEEEcC-------------CCCEEEEecCCCCCcceeeeec----------cccCCcceEEEccccCCccc
Confidence 9998 777777663 3489999988542 22111111 11234567889998421000
Q ss_pred EEEeccC-----CCcccccccCCeEEEEeCCCCCCCCceE---EEeeccccCceeeecCC----ceEEEEEeccccceEE
Q 002164 416 WAETQDG-----GDAKVEVTPRDIIYTQQAEPVQGEGPEI---LHKLDLRYGGISWCDDS----LALVYESWYKTRRTRT 483 (958)
Q Consensus 416 ~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~g~~~~~---l~~~~~~~~~~~~spDg----~~l~~~~~~~~~~~~l 483 (958)
.. ...+ +...+..+..+.|.+|+. ..++..+. +..+...+..++|+|++ +.|+..+.++. .+|
T Consensus 168 ~~-~~~~~~~~~~~~l~sgs~D~~v~lWd~--~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~--v~i 242 (316)
T 3bg1_A 168 ID-HPSGQKPNYIKRFASGGCDNLIKLWKE--EEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR--VFI 242 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEE--CTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE--EEE
T ss_pred cc-cccccCccccceEEEecCCCeEEEEEe--CCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe--EEE
Confidence 00 0000 000111234556778885 12222222 23445567889999997 56666554433 556
Q ss_pred EEEcCCC-CCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 484 WVISPGS-KDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 484 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
|.++... +......+ ......++. ++|+|||++|+...
T Consensus 243 w~~~~~~~~~~~~~~~-~~~~~~v~~------v~~sp~g~~las~~ 281 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLL-HKFNDVVWH------VSWSITANILAVSG 281 (316)
T ss_dssp EECSSTTCCCCBCCEE-EECSSCEEE------EEECTTTCCEEEEE
T ss_pred EEccCccccchhhhhh-hcCCCcEEE------EEEcCCCCEEEEEc
Confidence 6554311 11111222 222233343 88999999998776
No 349
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.25 E-value=1.1e-10 Score=129.68 Aligned_cols=117 Identities=13% Similarity=0.012 Sum_probs=80.2
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC---------CcEEEE
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR---------GFAILG 717 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~---------G~~vl~ 717 (958)
.+|..++...+.+.+ +..|.||++||.+.... .| ......|++. ||.|++
T Consensus 75 i~g~~i~~~~~~~~~------~~~~plll~HG~~~s~~-----------~~----~~~~~~L~~~~~~~~~~~~~~~vi~ 133 (388)
T 4i19_A 75 IDGATIHFLHVRSPE------PDATPMVITHGWPGTPV-----------EF----LDIIGPLTDPRAHGGDPADAFHLVI 133 (388)
T ss_dssp ETTEEEEEEEECCSS------TTCEEEEEECCTTCCGG-----------GG----HHHHHHHHCGGGGTSCGGGCEEEEE
T ss_pred ECCeEEEEEEccCCC------CCCCeEEEECCCCCCHH-----------HH----HHHHHHHhCcccccCCCCCCeEEEE
Confidence 389999987776542 12577999999753211 11 1334456655 999999
Q ss_pred cCCCCCCCCCCcccchh---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 718 GPTTPIIGEGDEEANDR---FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 718 ~~~~~~~G~G~~~~~~~---~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
.+.+|+|.+..... ......+|+.+.++. . ..++++++||||||.+++.++.++|++++++++.++.
T Consensus 134 ---~dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~---l---g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 134 ---PSLPGFGLSGPLKSAGWELGRIAMAWSKLMAS---L---GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp ---ECCTTSGGGCCCSSCCCCHHHHHHHHHHHHHH---T---TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred ---EcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---c---CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 56667887754322 233444444444333 2 3358999999999999999999999999999999864
No 350
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.25 E-value=1.1e-10 Score=123.52 Aligned_cols=214 Identities=14% Similarity=0.056 Sum_probs=126.9
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++.... +.+ .. .|.||++||.+.... .| ......| +.+|.|++ .|.+|+
T Consensus 11 ~~g~~l~y~~~-~~G----~~--~p~vvllHG~~~~~~-----------~w----~~~~~~L-~~~~rvia---~DlrGh 64 (276)
T 2wj6_A 11 VFDNKLSYIDN-QRD----TD--GPAILLLPGWCHDHR-----------VY----KYLIQEL-DADFRVIV---PNWRGH 64 (276)
T ss_dssp ETTEEEEEEEC-CCC----CS--SCEEEEECCTTCCGG-----------GG----HHHHHHH-TTTSCEEE---ECCTTC
T ss_pred eCCeEEEEEEe-cCC----CC--CCeEEEECCCCCcHH-----------HH----HHHHHHH-hcCCEEEE---eCCCCC
Confidence 47888865543 112 11 378999999642211 11 1223344 46799999 666788
Q ss_pred CCcccch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-CCceeEEEEeccCCCCCCCC---
Q 002164 727 GDEEAND--RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-PHLFCCGIARSGAYNRTLTP--- 800 (958)
Q Consensus 727 G~~~~~~--~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~~~~~~~~~~--- 800 (958)
|.+.... -......+|+.+.++.+ +-+++.|+||||||.+++.+|.++ |++++++|++++........
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~ 138 (276)
T 2wj6_A 65 GLSPSEVPDFGYQEQVKDALEILDQL------GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAK 138 (276)
T ss_dssp SSSCCCCCCCCHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHH
Confidence 8875432 22566777777777765 225899999999999999999999 99999999987542110000
Q ss_pred --------CCcc------------cccc-h---------------hhhcH-----HHHHh-cCcccccCCCCCCEEEEee
Q 002164 801 --------FGFQ------------NEDR-T---------------LWEAT-----STYVE-MSPFMSANKLKKPILLVHG 838 (958)
Q Consensus 801 --------~~~~------------~~~~-~---------------~~~~~-----~~~~~-~sp~~~~~~~~~P~Lii~G 838 (958)
..+. .... . .|... ..+.. .++...+.++++|+|+++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~ 218 (276)
T 2wj6_A 139 SLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHI 218 (276)
T ss_dssp HHHHHHCTTTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEE
T ss_pred HhhhccCcchHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEE
Confidence 0000 0000 0 00000 00000 0122345678899999987
Q ss_pred CCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 839 EEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 839 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
..|...+.......++.+.+ ...+++++|++||... .+....+.+.+.+||.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~----p~a~~~~i~~~gH~~~-~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 219 FSQPTEPEYEKINSDFAEQH----PWFSYAKLGGPTHFPA-IDVPDRAAVHIREFATAI 272 (276)
T ss_dssp ECCSCSHHHHHHHHHHHHHC----TTEEEEECCCSSSCHH-HHSHHHHHHHHHHHHHHH
T ss_pred ecCccchhHHHHHHHHHhhC----CCeEEEEeCCCCCccc-ccCHHHHHHHHHHHHhhc
Confidence 54433220012223333332 2479999999999863 566788889999999764
No 351
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.24 E-value=6.4e-10 Score=121.23 Aligned_cols=238 Identities=15% Similarity=0.175 Sum_probs=137.5
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCC----CCceeeeccC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGK----LGQEIEIQGF 185 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~----~~~~~~lt~~ 185 (958)
.+..++|||||++||..+.+ +.|.+|++..... ......+.++
T Consensus 60 ~v~~v~~sp~~~~las~s~D---------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~~h 106 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFD---------------------------------STVSIWAKEESADRTFEMDLLAIIEGH 106 (330)
T ss_dssp CEEEEEECTTSSEEEEEETT---------------------------------SCEEEEEC-------CCCEEEEEEC--
T ss_pred CEEEEEECCCCCEEEEEeCC---------------------------------CcEEEEEcccCcCccccceeEEEEcCC
Confidence 46789999999999988765 4788998743110 0112233332
Q ss_pred CCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcC-CCc---ee-eccCCCCccccccccceEEecCCeEEEE
Q 002164 186 PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD-TGK---AR-PLFQSPDIYLNAIFDNFVWVNNSTLLVC 260 (958)
Q Consensus 186 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~-~g~---~~-~lt~~~~~~~~~~~~~~~wspDG~~l~~ 260 (958)
...+...+|||||++|+.... ...|.+|++. ++. .. .+..... .+..++|+|||+.|+.
T Consensus 107 --~~~V~~v~~sp~g~~las~s~---------D~~v~iwd~~~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 107 --ENEVKGVAWSNDGYYLATCSR---------DKSVWIWETDESGEEYECISVLQEHSQ-----DVKHVIWHPSEALLAS 170 (330)
T ss_dssp ----CEEEEEECTTSCEEEEEET---------TSCEEEEECCTTCCCCEEEEEECCCSS-----CEEEEEECSSSSEEEE
T ss_pred --CCcEEEEEECCCCCEEEEEeC---------CCEEEEEeccCCCCCeEEEEEeccCCC-----ceEEEEECCCCCEEEE
Confidence 246889999999999988652 5578888874 332 11 2222222 2778999999999887
Q ss_pred EecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC---eeeecCCC-cccc
Q 002164 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TVKEIGPP-AVYT 335 (958)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g---~~~~l~~~-~~~~ 335 (958)
... ...|.+++. ++ ....+... ..+.
T Consensus 171 ~s~-------------------------------------------------D~~i~iW~~~~~~~~~~~~~~~h~~~v~ 201 (330)
T 2hes_X 171 SSY-------------------------------------------------DDTVRIWKDYDDDWECVAVLNGHEGTVW 201 (330)
T ss_dssp EET-------------------------------------------------TSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred EcC-------------------------------------------------CCeEEEEECCCCCeeEEEEccCCCCcEE
Confidence 621 123444554 44 23344444 6778
Q ss_pred ccccCCC--CcEEEEEeecCCccccccCCCCCceeEEEeccCce------EEEeccCCccccCcccccccccCcceeeee
Q 002164 336 SLDPSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF------VRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (958)
Q Consensus 336 ~~~~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~------~~~l~~~~~~~~~p~~~~~~~~~~~~~~~s 407 (958)
.++|+|| +..|+..+. ++.|.+|++.++. .+.+...+. .....+..++|+
T Consensus 202 ~~~~~~~~~~~~l~s~s~-------------D~~v~iw~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~v~~s 259 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGSD-------------DSTVRVWKYMGDDEDDQQEWVCEAILPD---------VHKRQVYNVAWG 259 (330)
T ss_dssp EEEECCSSSSCEEEEEET-------------TSCEEEEEEEEECTTSCEEEEEEEECCS---------CCSSCEEEEEEC
T ss_pred EEEecCCCCeeEEEEEeC-------------CCeEEEEEecCCCccccceeEEeeeccc---------ccccceEEEEEc
Confidence 8999999 667766653 3489999987431 011111110 011345788999
Q ss_pred cCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE----eecc-ccCceeeec--CCceEEEEEeccccc
Q 002164 408 SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH----KLDL-RYGGISWCD--DSLALVYESWYKTRR 480 (958)
Q Consensus 408 pDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~----~~~~-~~~~~~~sp--Dg~~l~~~~~~~~~~ 480 (958)
+++ .|+.. +..+.|.+|+. ..++.+.+. .+.. .+..++|+| |++.|+..+.++.
T Consensus 260 ~~~-~l~s~-------------~~dg~v~iw~~---~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~-- 320 (330)
T 2hes_X 260 FNG-LIASV-------------GADGVLAVYEE---VDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGI-- 320 (330)
T ss_dssp TTS-CEEEE-------------ETTSCEEEEEE---ETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSE--
T ss_pred CCC-EEEEE-------------eCCCEEEEEEc---CCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCc--
Confidence 766 44331 34567888885 333222221 1222 566789999 6888877665443
Q ss_pred eEEEEE
Q 002164 481 TRTWVI 486 (958)
Q Consensus 481 ~~l~~~ 486 (958)
.+||.+
T Consensus 321 v~~W~~ 326 (330)
T 2hes_X 321 VNFWSL 326 (330)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 556643
No 352
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.23 E-value=1.2e-09 Score=120.47 Aligned_cols=131 Identities=13% Similarity=-0.004 Sum_probs=71.7
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceE
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
...++|||+.+++.+. .+.++++|+.+...+.+...+..............+.+.++++|||+++++
T Consensus 204 ~~~~~~~g~~~~~~~~-------------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 204 FIAPALDKDKAHFVSY-------------YGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp CSCCEECSSEEEEEBT-------------TSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred EEEecccCCEEEEEeC-------------CCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 4456889998888762 237999998755433222111000000000001123445889999998877
Q ss_pred EEEeccCCCcccccccCCeEEEEeCCCCCCCC-ceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
.... ++.... .......|+++|+ +.++ ...+... . ...++|||||++|+. ++. ..|.++|+.++
T Consensus 271 ~~~~-~~~~~~-~~~~~~~v~viD~---~t~~~v~~i~~~-~-p~~ia~spdg~~l~v-~n~----~~v~v~D~~t~ 335 (361)
T 2oiz_A 271 FMHP-DGKEGT-HKFPAAEIWVMDT---KTKQRVARIPGR-D-ALSMTIDQQRNLMLT-LDG----GNVNVYDISQP 335 (361)
T ss_dssp EEES-SCCTTC-TTCCCSEEEEEET---TTTEEEEEEECT-T-CCEEEEETTTTEEEE-ECS----SCEEEEECSSS
T ss_pred EEcc-CCCccc-ccCCCceEEEEEC---CCCcEEEEEecC-C-eeEEEECCCCCEEEE-eCC----CeEEEEECCCC
Confidence 4331 111000 0112457999996 3333 3333333 3 788999999996654 443 24777788774
No 353
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=1.1e-08 Score=112.80 Aligned_cols=283 Identities=10% Similarity=-0.002 Sum_probs=147.6
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccC-CCCCceEEEEEcCCCceeeccCCC-Ccc
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDS-SSSKLRVWVADVDTGKARPLFQSP-DIY 241 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~-~~~~~~l~~~~~~~g~~~~lt~~~-~~~ 241 (958)
.+.++|..+ ++. +..++.+... .+.+||||++|+++........ +.....|.++|+++++...-...+ ...
T Consensus 48 ~v~v~D~~t----~~~--~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGS----GSI--LGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECCC----CeE--EEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 467777643 221 2223333334 8999999999998763211111 112456889999887654432222 000
Q ss_pred c--cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 242 ~--~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
. ......++|||||++|+++... ...+|+++
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~-----------------------------------------------~~~~v~vi 153 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFA-----------------------------------------------AGPAVGLV 153 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecC-----------------------------------------------CCCeEEEE
Confidence 0 0013478999999999987100 01346677
Q ss_pred EcCCee-ee-cCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCc-cccCcccccc
Q 002164 320 SLDGTV-KE-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPL-AEDIPIAFNS 396 (958)
Q Consensus 320 ~~~g~~-~~-l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~-~~~~p~~~~~ 396 (958)
|.+++. .. +.-++. +.+.|+|++.++.... ++++.+++..++....+...+. ....|
T Consensus 154 D~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~------------dg~~~~vd~~g~~~~~~~~~~~~~~~~p----- 213 (373)
T 2mad_H 154 VQGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCA------------QGGLAKTDHAGGAAGAGLVGAMLTAAQN----- 213 (373)
T ss_pred ECCCCEEeEEcCCCce---EEEEeCCCceEEEEcC------------CCCEEEEECCCcEEEEEeccccccCCcc-----
Confidence 722232 22 221121 3455677665544322 2356666662222211110000 00001
Q ss_pred cccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee----------ccc---cCceee
Q 002164 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL----------DLR---YGGISW 463 (958)
Q Consensus 397 ~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~----------~~~---~~~~~~ 463 (958)
-...+.+++|+..++|. ...+.++++|. .++..+.+... .+. ...+.+
T Consensus 214 ---~~~~~~~~~~~~~~~~~-------------~~~~~v~vid~---~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~ 274 (373)
T 2mad_H 214 ---LLTQPAQANKSGRIVWP-------------VYSGKILQADI---SAAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred ---eeecceeEecCCEEEEE-------------cCCceEEEEec---cCCcceEeeeeeecCCcccccceecCceEeEEE
Confidence 01235678888777764 23447888885 44333222110 111 122678
Q ss_pred ecCCceEEEEEeccc------cceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcE
Q 002164 464 CDDSLALVYESWYKT------RRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTY 537 (958)
Q Consensus 464 spDg~~l~~~~~~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~ 537 (958)
+|||++|+....... ....|+++|+.+.+ ........ ...++ +.|||||++++|..+.
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~--vv~~i~~g-~~p~~------i~~s~Dg~~~l~v~~~------- 338 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ--TSSQISLG-HDVDA------ISVAQDGGPDLYALSA------- 338 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE--EEEEEECC-CCcCe------EEECCCCCeEEEEEcC-------
Confidence 999998877653211 12579999998852 21111111 11122 7899999976666531
Q ss_pred EEEccCCCCCCCCCCeEEEEECCCCceEEE
Q 002164 538 ILLNGNGATPEGNIPFLDLFDINTGSKERI 567 (958)
Q Consensus 538 ~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l 567 (958)
....|.++|+++++....
T Consensus 339 ------------~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 339 ------------GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ------------CCCeEEEEECCCCCEEee
Confidence 113699999999887765
No 354
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.23 E-value=5.7e-10 Score=126.85 Aligned_cols=244 Identities=10% Similarity=0.072 Sum_probs=143.3
Q ss_pred CCCCceecC-CCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCC--CCCCceeeeccCC
Q 002164 110 PLPALSFSP-QRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPD--GKLGQEIEIQGFP 186 (958)
Q Consensus 110 ~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~d--g~~~~~~~lt~~~ 186 (958)
.+..++||| ||++||..+.+ +.|.+|++... +.. ....++ ..
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~d---------------------------------g~v~vwd~~~~~~~~~-~~~~~~-~~ 109 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQ---------------------------------GVIKIWNLKEIIVGEV-YSSSLT-YD 109 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETT---------------------------------SEEEEEEHHHHHTTCC-CSCSEE-EE
T ss_pred ceEEEEECCCCCCEEEEecCC---------------------------------ceEEEeECcccccCcc-cceeee-cc
Confidence 577899999 99999988875 57899998431 110 111122 11
Q ss_pred CCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcC---CCceeeccCCCCcc--------ccccccceE--Eec
Q 002164 187 DGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVD---TGKARPLFQSPDIY--------LNAIFDNFV--WVN 253 (958)
Q Consensus 187 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~---~g~~~~lt~~~~~~--------~~~~~~~~~--wsp 253 (958)
....+...+|+||++.|+.... ...|.+|+++ .++..+........ ....+..+. |++
T Consensus 110 h~~~v~~~~~~~~~~~l~s~s~---------dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 110 CSSTVTQITMIPNFDAFAVSSK---------DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp CSSCEEEEEECTTSSEEEEEET---------TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred CCCCEEEEEEeCCCCEEEEEeC---------CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 3357899999999999888652 4466666663 34333221100000 000022233 667
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCC-
Q 002164 254 NSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGP- 330 (958)
Q Consensus 254 DG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~- 330 (958)
|++.|+... ....|.++|+ +++ ...+..
T Consensus 181 ~~~~l~~~~-------------------------------------------------~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 181 EKSLLVALT-------------------------------------------------NLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp SCEEEEEEE-------------------------------------------------TTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEe-------------------------------------------------CCCeEEEEeCCCCeeeEEEccC
Confidence 888888661 2346888888 664 344443
Q ss_pred -C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCccccCcccccccccCccee---
Q 002164 331 -P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAEDIPIAFNSVRKGMRSI--- 404 (958)
Q Consensus 331 -~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~~p~~~~~~~~~~~~~--- 404 (958)
. ..+..++|+|||++|+..+.+ +.|.+||+..+... .+.. ... ..+..+
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~-~~~-----------~~v~~~~~~ 266 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTR-------------GIIDIWDIRFNVLIRSWSF-GDH-----------APITHVEVC 266 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETT-------------SCEEEEETTTTEEEEEEBC-TTC-----------EEEEEEEEC
T ss_pred CCCCceEEEEECCCCCEEEEEcCC-------------CeEEEEEcCCccEEEEEec-CCC-----------CceEEEEec
Confidence 3 678899999999999988743 48999999865543 3221 110 233456
Q ss_pred -eeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee--------------------------ccc
Q 002164 405 -NWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--------------------------DLR 457 (958)
Q Consensus 405 -~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--------------------------~~~ 457 (958)
.|+|||+.++.. +..+.|.+|++ ..+.....+... ...
T Consensus 267 ~~~s~~~~~l~s~-------------~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 331 (437)
T 3gre_A 267 QFYGKNSVIVVGG-------------SSKTFLTIWNF--VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNA 331 (437)
T ss_dssp TTTCTTEEEEEEE-------------STTEEEEEEET--TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGG
T ss_pred cccCCCccEEEEE-------------cCCCcEEEEEc--CCCcEEEEEEcCCCCCccceecccccccccceecccccCCc
Confidence 456677766652 44567899996 223333333322 223
Q ss_pred cCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 458 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
+..++|+ +++.|+....++ .|.++++..+
T Consensus 332 v~~l~~~-~~~~l~s~~~d~----~i~~wd~~~~ 360 (437)
T 3gre_A 332 LSTISVS-NDKILLTDEATS----SIVMFSLNEL 360 (437)
T ss_dssp GCCEEEE-TTEEEEEEGGGT----EEEEEETTCG
T ss_pred eEEEEEC-CceEEEecCCCC----eEEEEECCCc
Confidence 5567788 666666554332 3666666654
No 355
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=1.8e-09 Score=119.20 Aligned_cols=135 Identities=9% Similarity=-0.038 Sum_probs=79.1
Q ss_pred cccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCce
Q 002164 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (958)
Q Consensus 335 ~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~ 414 (958)
..+.+++|+..++|.+. .+.++++|+.+...+.+...+..............+...+.++|||++++
T Consensus 216 ~~~~~~~~~~~~~~~~~-------------~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 216 TQPAQANKSGRIVWPVY-------------SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred ecceeEecCCEEEEEcC-------------CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 34677888888888762 23788999876544433322111100000000112334478999999888
Q ss_pred EEEEeccCCCcccccccCCeEEEEeCCCCCCCCc-eEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
+.......+ ......+.|+++|. ++.+. ..+ ........+.|||||++++|..+... ..|+++|+.++
T Consensus 283 V~~~~~~~~---~~~~~~~~V~VID~---~t~~vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~--~~V~ViD~~t~ 351 (373)
T 2mad_H 283 LLTSEQSAW---KLHAAAKEVTSVTG---LVGQTSSQI-SLGHDVDAISVAQDGGPDLYALSAGT--EVLHIYDAGAG 351 (373)
T ss_pred EEeccCCcc---cccCCCCeEEEEEC---CCCEEEEEE-ECCCCcCeEEECCCCCeEEEEEcCCC--CeEEEEECCCC
Confidence 854321100 00012457999995 44433 444 33345678999999997778876543 46999998885
No 356
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.20 E-value=2.6e-10 Score=123.23 Aligned_cols=179 Identities=13% Similarity=0.025 Sum_probs=111.5
Q ss_pred HHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---
Q 002164 704 SVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA--- 780 (958)
Q Consensus 704 ~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--- 780 (958)
++..| +.||.|+. .+.+|+|.+............|+.+.++.+.. .+++.|+||||||.++..+|.+.
T Consensus 102 ~~~~L-~~~~~v~~---~d~~G~G~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~lvGhS~Gg~vA~~~A~~~~~~ 172 (319)
T 3lcr_A 102 LAEEL-DAGRRVSA---LVPPGFHGGQALPATLTVLVRSLADVVQAEVA-----DGEFALAGHSSGGVVAYEVARELEAR 172 (319)
T ss_dssp HHHHH-CTTSEEEE---EECTTSSTTCCEESSHHHHHHHHHHHHHHHHT-----TSCEEEEEETHHHHHHHHHHHHHHHT
T ss_pred HHHHh-CCCceEEE---eeCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHHHHHHHHHHHhc
Confidence 34444 78999999 55667776655444456666666666554422 25899999999999999999887
Q ss_pred CCceeEEEEeccCCCCCCC-CC-Cccc-ccchhhhc----------------HHHHHhcCcccccCCCCCCEEEEeeCCC
Q 002164 781 PHLFCCGIARSGAYNRTLT-PF-GFQN-EDRTLWEA----------------TSTYVEMSPFMSANKLKKPILLVHGEED 841 (958)
Q Consensus 781 p~~~~a~v~~~~~~~~~~~-~~-~~~~-~~~~~~~~----------------~~~~~~~sp~~~~~~~~~P~Lii~G~~D 841 (958)
|++++++|++++....... .. .+.. ........ ...+...-.......+++|+|+++|++
T Consensus 173 ~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~- 251 (319)
T 3lcr_A 173 GLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQ- 251 (319)
T ss_dssp TCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESS-
T ss_pred CCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-
Confidence 7889999998765321110 00 0000 00000000 000111111112357889999999998
Q ss_pred CCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCC-CcccHHHHHHHHHHHHHHhh
Q 002164 842 NNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYA-ARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 842 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~-~~~~~~~~~~~i~~fl~~~l 898 (958)
..++ +.....+.+.+.. ..+++++++ +|... ..++...+.+.|.+||.+..
T Consensus 252 ~~~~--~~~~~~~~~~~~~---~~~~~~~~g-~H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 252 PLVE--QEKPEWRGDVLAA---MGQVVEAPG-DHFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp CSSS--CCCTHHHHHHHHT---CSEEEEESS-CTTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred CCCC--cccchhhhhcCCC---CceEEEeCC-CcHHhhCcccHHHHHHHHHHHHHhcc
Confidence 4555 5666777776654 367888887 56543 33578889999999998864
No 357
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.20 E-value=7.9e-10 Score=118.02 Aligned_cols=208 Identities=16% Similarity=0.136 Sum_probs=120.6
Q ss_pred CCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCC
Q 002164 647 KDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGE 726 (958)
Q Consensus 647 ~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~ 726 (958)
.+|.+++.... + . .|.||++||.+.... .|. ..... .+.+|.|++ .|.+|+
T Consensus 12 ~~~~~~~~~~~---g----~---g~~~vllHG~~~~~~-----------~w~----~~~~~-l~~~~~vi~---~Dl~G~ 62 (291)
T 3qyj_A 12 TTEARINLVKA---G----H---GAPLLLLHGYPQTHV-----------MWH----KIAPL-LANNFTVVA---TDLRGY 62 (291)
T ss_dssp CSSCEEEEEEE---C----C---SSEEEEECCTTCCGG-----------GGT----TTHHH-HTTTSEEEE---ECCTTS
T ss_pred cCCeEEEEEEc---C----C---CCeEEEECCCCCCHH-----------HHH----HHHHH-HhCCCEEEE---EcCCCC
Confidence 47888876543 1 1 356888999753221 111 11223 457899999 566688
Q ss_pred CCcccch-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCC----
Q 002164 727 GDEEAND-------RFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYN---- 795 (958)
Q Consensus 727 G~~~~~~-------~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~---- 795 (958)
|.+.... .......+|+.+.++.+ + .+++.++||||||.+++.++.++|++++++|++++...
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~ 136 (291)
T 3qyj_A 63 GDSSRPASVPHHINYSKRVMAQDQVEVMSKL---G---YEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMY 136 (291)
T ss_dssp TTSCCCCCCGGGGGGSHHHHHHHHHHHHHHT---T---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHH
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHc---C---CCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhh
Confidence 8775432 12344455655554432 2 35899999999999999999999999999998864210
Q ss_pred -CCC--------------CCCCccc----cc--------------c-hh------------hhcH-------HHHHhcC-
Q 002164 796 -RTL--------------TPFGFQN----ED--------------R-TL------------WEAT-------STYVEMS- 821 (958)
Q Consensus 796 -~~~--------------~~~~~~~----~~--------------~-~~------------~~~~-------~~~~~~s- 821 (958)
... .+..... .. . .. +..+ ..|....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (291)
T 3qyj_A 137 RTTDQEFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAAT 216 (291)
T ss_dssp HTCCHHHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTT
T ss_pred hcchhhhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccc
Confidence 000 0000000 00 0 00 0000 0011100
Q ss_pred ------cccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 002164 822 ------PFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQ 895 (958)
Q Consensus 822 ------p~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~ 895 (958)
......++++|+|+++|++|...+ .... .+..+.....++..+++ +||.+ ..++...+.+.|.+||.
T Consensus 217 ~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~--~~~~---~~~~~~~~~~~~~~~~~-~GH~~-~~E~P~~v~~~i~~fL~ 289 (291)
T 3qyj_A 217 IDLEHDELDMKQKISCPVLVLWGEKGIIGR--KYDV---LATWRERAIDVSGQSLP-CGHFL-PEEAPEETYQAIYNFLT 289 (291)
T ss_dssp HHHHHHHTTTTCCBCSCEEEEEETTSSHHH--HSCH---HHHHHTTBSSEEEEEES-SSSCH-HHHSHHHHHHHHHHHHH
T ss_pred cchhhcchhcCCccccceEEEecccccccc--hhhH---HHHHHhhcCCcceeecc-CCCCc-hhhCHHHHHHHHHHHHh
Confidence 011346789999999999996432 1111 12223333456777787 79976 46778888899999986
Q ss_pred H
Q 002164 896 K 896 (958)
Q Consensus 896 ~ 896 (958)
+
T Consensus 290 ~ 290 (291)
T 3qyj_A 290 H 290 (291)
T ss_dssp C
T ss_pred c
Confidence 4
No 358
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.19 E-value=2.1e-10 Score=139.92 Aligned_cols=239 Identities=12% Similarity=0.139 Sum_probs=152.3
Q ss_pred CCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCC
Q 002164 110 PLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGA 189 (958)
Q Consensus 110 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~ 189 (958)
.+..++|||||++|+....+ +.|.+|++.. ++......+.+ +..
T Consensus 11 ~V~~l~~s~dg~~latg~~d---------------------------------g~I~vwd~~~-~~~~~~~~l~~--h~~ 54 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSD---------------------------------KTIKIFEVEG-ETHKLIDTLTG--HEG 54 (753)
T ss_dssp CEEEECCCSSSCCEEEEETT---------------------------------TEEEEEEEET-TEEEEEEEECC--CSS
T ss_pred eeEEEEECCCCCeEEEEECC---------------------------------CcEEEEecCC-CCCccceeccC--CcC
Confidence 56788999999999988765 4789999853 11112233333 334
Q ss_pred cccceeecCC--CCeEEEEEeeccccCCCCCceEEEEEcCCCceeec--cCCCCccccccccceEEecC--CeEEEEEec
Q 002164 190 KLNFVTWSQD--GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNN--STLLVCTIP 263 (958)
Q Consensus 190 ~~~~~~wSPD--G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~l--t~~~~~~~~~~~~~~~wspD--G~~l~~~~~ 263 (958)
.+....|+|+ |+.|+.... ...|.+|++.+++...+ ...... .+..++|+|+ |+.|++..
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~---------Dg~I~vwd~~~~~~~~~~~~~~h~~----~V~~v~~sp~~~~~~l~sgs- 120 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSY---------DGKVLIWKEENGRWSQIAVHAVHSA----SVNSVQWAPHEYGPLLLVAS- 120 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEET---------TSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCGGGCSEEEEEE-
T ss_pred ceEEEEecCCCCCCEEEEEeC---------CCeEEEEECCCCcccccccccCCCC----CeEEEEECCCCCCCEEEEEe-
Confidence 7899999998 988888652 55788888888752222 221222 2779999999 88888762
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC---eeeecCCC-ccccccc
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG---TVKEIGPP-AVYTSLD 338 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g---~~~~l~~~-~~~~~~~ 338 (958)
..+.|.++++ ++ ....+... ..+..+.
T Consensus 121 ------------------------------------------------~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~ 152 (753)
T 3jro_A 121 ------------------------------------------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 152 (753)
T ss_dssp ------------------------------------------------TTSEEEEEECCSSSCCCCEEEECCSSCEEEEE
T ss_pred ------------------------------------------------CCCcEEEEEeecCCCcceeEeecCCCceEEEE
Confidence 2245777777 44 22233333 6778899
Q ss_pred cCC-------------CCcEEEEEeecCCccccccCCCCCceeEEEeccCce--EEEeccCCccccCcccccccccCcce
Q 002164 339 PSP-------------DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRS 403 (958)
Q Consensus 339 ~Sp-------------DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~--~~~l~~~~~~~~~p~~~~~~~~~~~~ 403 (958)
|+| ||+.|+..+.+ +.|.+||+.++. ...+.... .....+..
T Consensus 153 ~~p~~~~~~~~~~~~~d~~~l~sgs~d-------------g~I~iwd~~~~~~~~~~~~~~~----------~h~~~V~~ 209 (753)
T 3jro_A 153 WAPATIEEDGEHNGTKESRKFVTGGAD-------------NLVKIWKYNSDAQTYVLESTLE----------GHSDWVRD 209 (753)
T ss_dssp ECCCC---------CGGGCCEEEEETT-------------SCEEEEEEETTTTEEEEEEEEC----------CCSSCEEE
T ss_pred ecCcccccccccccCCCCCEEEEEECC-------------CeEEEEeccCCcccceeeeeec----------CCCCcEEE
Confidence 999 68888887743 489999997542 12221111 11245678
Q ss_pred eeeecC---CCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC---ceEE---EeeccccCceeeecCCceEEEEE
Q 002164 404 INWRSD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG---PEIL---HKLDLRYGGISWCDDSLALVYES 474 (958)
Q Consensus 404 ~~~spD---G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~---~~~l---~~~~~~~~~~~~spDg~~l~~~~ 474 (958)
+.|+|| |+.++.. +..+.|.+|++ ..+. ...+ ......+..++|+|||+.|+..+
T Consensus 210 l~~sp~~~~~~~l~s~-------------s~Dg~I~iwd~---~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 210 VAWSPTVLLRSYLASV-------------SQDRTCIIWTQ---DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp EEECCCCSSSEEEEEE-------------ESSSCEEEEEE---SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred EEeccCCCCCCEEEEE-------------ecCCEEEEecC---CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 999999 6766652 44567888886 2221 1111 22445677899999999988775
Q ss_pred eccccceEEEEEc
Q 002164 475 WYKTRRTRTWVIS 487 (958)
Q Consensus 475 ~~~~~~~~l~~~~ 487 (958)
..+. ..+|.++
T Consensus 274 ~Dg~--I~vwd~~ 284 (753)
T 3jro_A 274 GDNK--VTLWKEN 284 (753)
T ss_dssp SSSC--EECCBCC
T ss_pred CCCE--EEEEecC
Confidence 4332 4455443
No 359
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.19 E-value=1.1e-08 Score=110.27 Aligned_cols=280 Identities=12% Similarity=0.119 Sum_probs=163.3
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (958)
.+...||+++ .||... ...|++||+++|+..++...... ...+..++|+|||+.|+...
T Consensus 28 ~~~l~WS~~~-~lAvg~----------D~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~~~l~sgs-------- 86 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL----------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGT-------- 86 (318)
T ss_dssp CBCEEECTTS-EEEEEE----------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEE--------
T ss_pred ceEEEECCCC-EEEEEe----------CCEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCCCEEEEEE--------
Confidence 4568999987 666643 45799999999987665432221 11267899999999998762
Q ss_pred CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCCccccccccCCCCcEEEE
Q 002164 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPAVYTSLDPSPDEKYILI 348 (958)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~~~~~~~~~SpDGk~l~~ 348 (958)
....|.++++ +++.. .+... ......++++++.++.
T Consensus 87 -----------------------------------------~Dg~v~iw~~~~~~~~~~~~~h-~~~~~~~~~~~~~l~s 124 (318)
T 4ggc_A 87 -----------------------------------------SSAEVQLWDVQQQKRLRNMTSH-SARVGSLSWNSYILSS 124 (318)
T ss_dssp -----------------------------------------TTSEEEEEETTTTEEEEEEECC-SSCEEEEEEETTEEEE
T ss_pred -----------------------------------------CCCcEEEeecCCceeEEEecCc-cceEEEeecCCCEEEE
Confidence 2245777787 66543 33322 1223456777887776
Q ss_pred EeecCCccccccCCCCCceeEEEeccCce--EEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIF--VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~l~d~~~~~--~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
.+.. +.+.+|+..... ...+..+. .......|+++|+.++..
T Consensus 125 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~s~---------- 168 (318)
T 4ggc_A 125 GSRS-------------GHIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRHLASG---------- 168 (318)
T ss_dssp EETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSEEEEE----------
T ss_pred EecC-------------CceEeeecCCCceeEEEEcCcc-------------CceEEEEEcCCCCEEEEE----------
Confidence 6533 366677766432 22222211 334578899999877652
Q ss_pred cccccCCeEEEEeCCCCCCCC----ceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEG----PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRS 502 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~----~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 502 (958)
+..+.|.+|++ ..+.. ..........+..+.|+|++..+++....... ..+.+.+.... ...... ..
T Consensus 169 ---~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~i~lwd~~~~--~~~~~~-~~ 239 (318)
T 4ggc_A 169 ---GNDNLVNVWPS--APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD-RHIRIWNVCSG--ACLSAV-DA 239 (318)
T ss_dssp ---ETTSCEEEEES--SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT-CEEEEEETTTC--CEEEEE-EC
T ss_pred ---ecCcceeEEEC--CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC-CEEEEEecccc--cccccc-cc
Confidence 44567888986 22221 12223334456678999998877665432221 23444555543 112221 11
Q ss_pred CccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEee
Q 002164 503 SEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVAL 582 (958)
Q Consensus 503 ~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~ 582 (958)
...+.. ..|+|+++.++..... ....|++||+.+++......+... .+.
T Consensus 240 ~~~v~~------~~~~~~~~~~~~~sg~-------------------~d~~i~iwd~~~~~~~~~l~gH~~----~V~-- 288 (318)
T 4ggc_A 240 HSQVCS------ILWSPHYKELISGHGF-------------------AQNQLVIWKYPTMAKVAELKGHTS----RVL-- 288 (318)
T ss_dssp SSCEEE------EEEETTTTEEEEEECT-------------------TTCCEEEEETTTCCEEEEECCCSS----CEE--
T ss_pred eeeeee------eeecccccceEEEEEc-------------------CCCEEEEEECCCCcEEEEEcCCCC----CEE--
Confidence 122222 6789999988766411 112599999998887665543321 122
Q ss_pred cCCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002164 583 MSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (958)
Q Consensus 583 ~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~ 618 (958)
..+|+|||+.|+.... ...+.+|++.+
T Consensus 289 -----~l~~spdg~~l~S~s~----D~~v~iWd~~~ 315 (318)
T 4ggc_A 289 -----SLTMSPDGATVASAAA----DETLRLWRCFE 315 (318)
T ss_dssp -----EEEECTTSSCEEEEET----TTEEEEECCSC
T ss_pred -----EEEEcCCCCEEEEEec----CCeEEEEECCC
Confidence 2478999986653322 24577877644
No 360
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.19 E-value=6.5e-10 Score=120.35 Aligned_cols=196 Identities=14% Similarity=0.127 Sum_probs=117.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCCCCCCCcccch---hhHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAND---RFVEQLVACAEA 745 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~~G~G~~~~~~---~~~~~~~~D~~~ 745 (958)
.|.||++||++.... .| ......|++ .+|.|++ .|.+|+|.+.... .......+|+.+
T Consensus 38 ~p~lvllHG~~~~~~-----------~w----~~~~~~L~~~~~~~via---~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ 99 (316)
T 3c5v_A 38 GPVLLLLHGGGHSAL-----------SW----AVFTAAIISRVQCRIVA---LDLRSHGETKVKNPEDLSAETMAKDVGN 99 (316)
T ss_dssp SCEEEEECCTTCCGG-----------GG----HHHHHHHHTTBCCEEEE---ECCTTSTTCBCSCTTCCCHHHHHHHHHH
T ss_pred CcEEEEECCCCcccc-----------cH----HHHHHHHhhcCCeEEEE---ecCCCCCCCCCCCccccCHHHHHHHHHH
Confidence 478999999642211 11 123445555 3899999 6667888875431 235677888888
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEeccCCCCC------------CCCCCcccc-----
Q 002164 746 AVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAYNRT------------LTPFGFQNE----- 806 (958)
Q Consensus 746 av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~~~~------------~~~~~~~~~----- 806 (958)
.++.+... + ++++.|+||||||.+|+.+|.+ .|+ ++++|++++..... ..+..+...
T Consensus 100 ~l~~l~~~--~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3c5v_A 100 VVEAMYGD--L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIE 175 (316)
T ss_dssp HHHHHHTT--C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHH
T ss_pred HHHHHhcc--C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHH
Confidence 88887432 1 2589999999999999999996 466 89998876421000 000000000
Q ss_pred -------cchhh----hcHHHHHh-------------------cCc--------------ccccCCCCCCEEEEeeCCCC
Q 002164 807 -------DRTLW----EATSTYVE-------------------MSP--------------FMSANKLKKPILLVHGEEDN 842 (958)
Q Consensus 807 -------~~~~~----~~~~~~~~-------------------~sp--------------~~~~~~~~~P~Lii~G~~D~ 842 (958)
..... ..+..+.. ... ...+.++++|+|+++|++|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~ 255 (316)
T 3c5v_A 176 WSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDR 255 (316)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEEESSCCC
T ss_pred HhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEEEecccc
Confidence 00000 00000000 000 00112578999999999997
Q ss_pred CCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 843 NSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 843 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
..+ .... +.+. ...+++++|++||... .+..+.+.+.|.+||.+.
T Consensus 256 ~~~--~~~~----~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 300 (316)
T 3c5v_A 256 LDK--DLTI----GQMQ---GKFQMQVLPQCGHAVH-EDAPDKVAEAVATFLIRH 300 (316)
T ss_dssp CCH--HHHH----HHHT---TCSEEEECCCCSSCHH-HHSHHHHHHHHHHHHHHT
T ss_pred ccc--HHHH----HhhC---CceeEEEcCCCCCccc-ccCHHHHHHHHHHHHHhc
Confidence 643 2111 2222 2358999999999874 456778889999999764
No 361
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.19 E-value=5.1e-10 Score=115.15 Aligned_cols=153 Identities=14% Similarity=0.127 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----ceeEEEEeccCCCCCCCCC---C--cccc
Q 002164 737 EQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-----LFCCGIARSGAYNRTLTPF---G--FQNE 806 (958)
Q Consensus 737 ~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~~~~~~~~~~~---~--~~~~ 806 (958)
....+++.++++++.++..+ +++.++||||||.+++.++.++|. +++.+|++++.++...... . ....
T Consensus 77 ~~~~~~l~~~i~~l~~~~~~--~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~ 154 (249)
T 3fle_A 77 KENAYWIKEVLSQLKSQFGI--QQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDK 154 (249)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--CEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCT
T ss_pred HHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcc
Confidence 45677888889999877433 589999999999999999998763 7999999998776432100 0 0001
Q ss_pred cchhhhcHHHHHhc-CcccccCCCCCCEEEEeeC------CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC--CCccC
Q 002164 807 DRTLWEATSTYVEM-SPFMSANKLKKPILLVHGE------EDNNSGTLTMQSDRFFNALKGHGALCRLVILPF--ESHGY 877 (958)
Q Consensus 807 ~~~~~~~~~~~~~~-sp~~~~~~~~~P~Lii~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~--~~H~~ 877 (958)
.+.+......|... .-...+.+.++|+|.|+|+ .|..|| ...++.+...++......+.+.+.| +.|..
T Consensus 155 ~g~p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~--~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~ 232 (249)
T 3fle_A 155 QGKPSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVS--NSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQ 232 (249)
T ss_dssp TCCBSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSB--HHHHHTHHHHSTTCSSEEEEEEEESGGGSTGG
T ss_pred cCCCcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCccc--HHHHHHHHHHHhhCCCceEEEEEeCCCCchhc
Confidence 11111111122221 1112233356899999998 799999 8888888777777777777788876 88987
Q ss_pred CCcccHHHHHHHHHHHHH
Q 002164 878 AARESIMHVLWETDRWLQ 895 (958)
Q Consensus 878 ~~~~~~~~~~~~i~~fl~ 895 (958)
.. ++ ..+.+.|.+||.
T Consensus 233 l~-~n-~~V~~~I~~FLw 248 (249)
T 3fle_A 233 LH-EN-KDVANEIIQFLW 248 (249)
T ss_dssp GG-GC-HHHHHHHHHHHT
T ss_pred cc-cC-HHHHHHHHHHhc
Confidence 43 33 477888888873
No 362
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.18 E-value=1.3e-08 Score=118.17 Aligned_cols=317 Identities=12% Similarity=0.032 Sum_probs=169.4
Q ss_pred CCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCcc
Q 002164 112 PALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKL 191 (958)
Q Consensus 112 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~ 191 (958)
..+.|||||+++.....+ +.|.++|+.. .+.....++. .+...
T Consensus 200 ~~v~~SpDGr~lyv~~~d---------------------------------g~V~viD~~~-~t~~~v~~i~---~G~~P 242 (567)
T 1qks_A 200 HISRLSASGRYLFVIGRD---------------------------------GKVNMIDLWM-KEPTTVAEIK---IGSEA 242 (567)
T ss_dssp EEEEECTTSCEEEEEETT---------------------------------SEEEEEETTS-SSCCEEEEEE---CCSEE
T ss_pred cceEECCCCCEEEEEcCC---------------------------------CeEEEEECCC-CCCcEeEEEe---cCCCC
Confidence 357788888887655432 3688888731 1112233332 33456
Q ss_pred cceeec----CCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc-------cccccceEEecCCeEEEE
Q 002164 192 NFVTWS----QDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL-------NAIFDNFVWVNNSTLLVC 260 (958)
Q Consensus 192 ~~~~wS----PDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~-------~~~~~~~~wspDG~~l~~ 260 (958)
...++| |||++++.+.. ....|.++|..+.+..+......... ...+..+..|+++..+++
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~--------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAY--------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEE--------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred ceeEEccccCCCCCEEEEEEc--------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 778999 79999887653 24678889988877765432211000 001335566777665554
Q ss_pred EecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe---eeecCCCccccc
Q 002164 261 TIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPPAVYTS 336 (958)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~---~~~l~~~~~~~~ 336 (958)
... ..++|++++. +.+ ...+........
T Consensus 315 ~~~------------------------------------------------~~g~v~~vd~~~~~~~~v~~i~~~~~~~d 346 (567)
T 1qks_A 315 NVK------------------------------------------------ETGKILLVDYTDLNNLKTTEISAERFLHD 346 (567)
T ss_dssp EET------------------------------------------------TTTEEEEEETTCSSEEEEEEEECCSSEEE
T ss_pred Eec------------------------------------------------CCCeEEEEecCCCccceeeeeeccccccC
Confidence 410 2456888887 432 222222233446
Q ss_pred cccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceee-eecCCCCceE
Q 002164 337 LDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN-WRSDKPSTLY 415 (958)
Q Consensus 337 ~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~-~spDG~~l~~ 415 (958)
..|+|||+++++.... .++|.++|+++++........ . ..|. -.+.+. ++||+..+++
T Consensus 347 ~~~~pdgr~~~va~~~------------sn~V~ViD~~t~kl~~~i~vg-g-~~Ph-------pg~g~~~~~p~~g~v~~ 405 (567)
T 1qks_A 347 GGLDGSHRYFITAANA------------RNKLVVIDTKEGKLVAIEDTG-G-QTPH-------PGRGANFVHPTFGPVWA 405 (567)
T ss_dssp EEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEECS-S-SSBC-------CTTCEEEEETTTEEEEE
T ss_pred ceECCCCCEEEEEeCC------------CCeEEEEECCCCcEEEEEecc-C-cCCC-------CccceeeECCCCCcEEE
Confidence 7899999999888754 248999999977654432210 0 0111 113344 4788776655
Q ss_pred EEEeccCCCcccccccCCeEEEEeCCCCC-----CCCceEEEeeccccCceeeecCCceEEEEEecccc---ceEEEEEc
Q 002164 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQ-----GEGPEILHKLDLRYGGISWCDDSLALVYESWYKTR---RTRTWVIS 487 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~---~~~l~~~~ 487 (958)
..+ -..+.|.+++.++.. -+..+.+......-..+..+|||++|+.....+.. ...|.++|
T Consensus 406 t~~-----------~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 406 TSH-----------MGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp EEB-----------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred eCC-----------CCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 311 123568888862211 01122232221122346789999998876422211 13577777
Q ss_pred CCCC-----CCCcEEEeccCCcccc-CCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCC
Q 002164 488 PGSK-----DVAPRILFDRSSEDVY-SDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINT 561 (958)
Q Consensus 488 ~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~ 561 (958)
..+. ......+.-.....+- +....-++.|+|||+++++..-.. ......|.++|.++
T Consensus 475 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~----------------~~~~~~i~v~D~~t 538 (567)
T 1qks_A 475 IKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNG----------------KDQESALVVVDDKT 538 (567)
T ss_dssp GGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECC----------------TTSCCEEEEEETTT
T ss_pred CCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecC----------------CCCCCcEEEEECCC
Confidence 6543 1111222100000000 000011267999999998875211 00123688999999
Q ss_pred CceEEEec
Q 002164 562 GSKERIWE 569 (958)
Q Consensus 562 g~~~~l~~ 569 (958)
++......
T Consensus 539 ~~~~~~i~ 546 (567)
T 1qks_A 539 LELKHVIK 546 (567)
T ss_dssp TEEEEEEC
T ss_pred ceEEEEeC
Confidence 88766554
No 363
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.17 E-value=2.3e-09 Score=118.21 Aligned_cols=268 Identities=12% Similarity=0.073 Sum_probs=151.2
Q ss_pred CcccceeecCC---CCeEEEEEeeccccCCCCCceEEEEEcCC-Ccee-eccCCCCccccccccceEEecCCeEEEEEec
Q 002164 189 AKLNFVTWSQD---GKHLAFSIRIDAEDSSSSKLRVWVADVDT-GKAR-PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIP 263 (958)
Q Consensus 189 ~~~~~~~wSPD---G~~iaf~~~~~~~~~~~~~~~l~~~~~~~-g~~~-~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~ 263 (958)
..+...+|+|| |+.|+... ....|.+|++.+ +... ......... +..++|+|||+.|+...
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~- 105 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGS---------WANDVRCWEVQDSGQTIPKAQQMHTGP----VLDVCWSDDGSKVFTAS- 105 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEE---------TTSEEEEEEECTTSCEEEEEEEECSSC----EEEEEECTTSSEEEEEE-
T ss_pred CceEEEEEcCCCCCceEEEEEC---------CCCcEEEEEcCCCCceeEEEeccccCC----EEEEEECcCCCEEEEEc-
Confidence 47999999999 58887754 245788888876 4432 222222222 77999999999998761
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-cccccccc--
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDP-- 339 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~-- 339 (958)
....|.++++ +++...+... ..+..+.|
T Consensus 106 ------------------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 106 ------------------------------------------------CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIK 137 (368)
T ss_dssp ------------------------------------------------TTSEEEEEETTTTEEEEEEECSSCEEEEEEEE
T ss_pred ------------------------------------------------CCCcEEEEEcCCCCceeeccccCceEEEEEEe
Confidence 2245778888 7765555444 67888999
Q ss_pred CCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEE
Q 002164 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (958)
Q Consensus 340 SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~ 418 (958)
+|||+.|+..+.+ +.|.+||+..+.. ..+... . ....+.+.+..++..
T Consensus 138 ~~~~~~l~~~~~d-------------g~i~vwd~~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~~-- 186 (368)
T 3mmy_A 138 APNYSCVMTGSWD-------------KTLKFWDTRSSNPMMVLQLP--------------E--RCYCADVIYPMAVVA-- 186 (368)
T ss_dssp CSSCEEEEEEETT-------------SEEEEECSSCSSCSEEEECS--------------S--CEEEEEEETTEEEEE--
T ss_pred CCCCCEEEEccCC-------------CcEEEEECCCCcEEEEEecC--------------C--CceEEEecCCeeEEE--
Confidence 9999998887733 4899999985432 222211 1 122233333333332
Q ss_pred eccCCCcccccccCCeEEEEeCCCCCCCCceEE--E-eeccccCceeeecCCce----EEEEEeccccceEEEEEcCCCC
Q 002164 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL--H-KLDLRYGGISWCDDSLA----LVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l--~-~~~~~~~~~~~spDg~~----l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
...+.+.+|+. ........ . ........+.+.+++.. ++.....+. ..+|.++....
T Consensus 187 -----------~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~--i~i~~~~~~~~ 250 (368)
T 3mmy_A 187 -----------TAERGLIVYQL---ENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR--VAIHYINPPNP 250 (368)
T ss_dssp -----------EGGGCEEEEEC---SSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE--EEEEESSCSCH
T ss_pred -----------eCCCcEEEEEe---ccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc--EEEEecCCCCc
Confidence 23445777775 22221111 1 11122223444444433 554433322 44554443221
Q ss_pred CCCcEEEeccCCc------------cccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEEC
Q 002164 492 DVAPRILFDRSSE------------DVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDI 559 (958)
Q Consensus 492 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl 559 (958)
............ .+.. +.|+|||++|+....+ ..|++||+
T Consensus 251 -~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~sp~~~~l~s~~~d---------------------g~i~iwd~ 302 (368)
T 3mmy_A 251 -AKDNFTFKCHRSNGTNTSAPQDIYAVNG------IAFHPVHGTLATVGSD---------------------GRFSFWDK 302 (368)
T ss_dssp -HHHSEEEECSEEC----CCCEEECCEEE------EEECTTTCCEEEEETT---------------------SCEEEEET
T ss_pred -cccceeeeeeecccccccccccccceEE------EEEecCCCEEEEEccC---------------------CeEEEEEC
Confidence 011122222111 1222 7899999998877621 25999999
Q ss_pred CCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEec
Q 002164 560 NTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKES 604 (958)
Q Consensus 560 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s 604 (958)
.+++.......... .+. ..+|+|||+.++.....
T Consensus 303 ~~~~~~~~~~~~~~----~v~-------~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 303 DARTKLKTSEQLDQ----PIS-------ACCFNHNGNIFAYASSY 336 (368)
T ss_dssp TTTEEEEECCCCSS----CEE-------EEEECTTSSCEEEEECC
T ss_pred CCCcEEEEecCCCC----Cce-------EEEECCCCCeEEEEecc
Confidence 98876655443221 122 25789999887776553
No 364
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.17 E-value=4.1e-09 Score=119.44 Aligned_cols=233 Identities=9% Similarity=0.073 Sum_probs=137.7
Q ss_pred CCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCC----------Cce-eeccCCCCccccccccceEEecCCe
Q 002164 188 GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDT----------GKA-RPLFQSPDIYLNAIFDNFVWVNNST 256 (958)
Q Consensus 188 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~----------g~~-~~lt~~~~~~~~~~~~~~~wspDG~ 256 (958)
...+...+|+|++..++++.. ....|++|++.. ... ..+..... .+..++|+|+++
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~--------~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~ 194 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKT--------PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-----EGYGLSWNPNLN 194 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEEC--------SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-----CCCCEEECTTST
T ss_pred CCcEEEEEECCCCCcEEEEEC--------CCCcEEEEECCCcccccCccccCCCcEEecCCCC-----CeEEEEeCCCCC
Confidence 357899999998555555432 245688888875 122 22222222 266899999998
Q ss_pred -EEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe--------ee
Q 002164 257 -LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT--------VK 326 (958)
Q Consensus 257 -~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~--------~~ 326 (958)
.|+... ..+.|.++++ ++. ..
T Consensus 195 ~~l~s~~-------------------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~ 225 (430)
T 2xyi_A 195 GYLLSAS-------------------------------------------------DDHTICLWDINATPKEHRVIDAKN 225 (430)
T ss_dssp TEEEEEC-------------------------------------------------TTSCEEEEETTSCCBGGGEEECSE
T ss_pred CeEEEEe-------------------------------------------------CCCeEEEEeCCCCCCCCceeccce
Confidence 777551 1234667776 421 22
Q ss_pred ecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCce----EEEeccCCccccCcccccccccCc
Q 002164 327 EIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF----VRELCDLPLAEDIPIAFNSVRKGM 401 (958)
Q Consensus 327 ~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~----~~~l~~~~~~~~~p~~~~~~~~~~ 401 (958)
.+... ..+..++|+|++..++++... ++.|.+||+..+. ...+.. ....+
T Consensus 226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~------------dg~i~i~d~~~~~~~~~~~~~~~-------------~~~~v 280 (430)
T 2xyi_A 226 IFTGHTAVVEDVAWHLLHESLFGSVAD------------DQKLMIWDTRNNNTSKPSHTVDA-------------HTAEV 280 (430)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEET------------TSEEEEEETTCSCSSSCSEEEEC-------------CSSCE
T ss_pred eecCCCCCEeeeEEeCCCCCEEEEEeC------------CCeEEEEECCCCCCCcceeEeec-------------CCCCe
Confidence 33333 668889999955544444322 3489999998542 122211 12456
Q ss_pred ceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCC-CCCceEEEeeccccCceeeecCCceEEEEEeccccc
Q 002164 402 RSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRR 480 (958)
Q Consensus 402 ~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 480 (958)
..+.|+|+|+.+++.. +..+.|.+|++ .. +.....+..+...+..+.|+|+++.++++...++.
T Consensus 281 ~~i~~~p~~~~~l~tg------------~~dg~v~vwd~--~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~- 345 (430)
T 2xyi_A 281 NCLSFNPYSEFILATG------------SADKTVALWDL--RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR- 345 (430)
T ss_dssp EEEEECSSCTTEEEEE------------ETTSEEEEEET--TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-
T ss_pred EEEEeCCCCCCEEEEE------------eCCCeEEEEeC--CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-
Confidence 7899999999866641 34567899996 22 23345556667778889999999886666554432
Q ss_pred eEEEEEcCCCCCC----------CcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 481 TRTWVISPGSKDV----------APRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 481 ~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
..||.+...+... ............+.. ++|+|+|++++...
T Consensus 346 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~------~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 346 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD------FSWNPNEPWIICSV 397 (430)
T ss_dssp CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE------EEECSSSTTEEEEE
T ss_pred EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE------EEECCCCCCEEEEE
Confidence 5666655422100 111222222222333 88999999554443
No 365
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.16 E-value=5.1e-10 Score=136.50 Aligned_cols=232 Identities=12% Similarity=0.116 Sum_probs=142.1
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeec--cCCCCccccccccceEEecC--CeEEEEEecC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL--FQSPDIYLNAIFDNFVWVNN--STLLVCTIPL 264 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~l--t~~~~~~~~~~~~~~~wspD--G~~l~~~~~~ 264 (958)
..+..++|||||++|+.... ...|.+|++.++....+ ...... .+..++|+|+ |+.|+...
T Consensus 10 ~~V~~l~~s~dg~~latg~~---------dg~I~vwd~~~~~~~~~~~l~~h~~----~V~~l~~s~~~~~~~l~s~s-- 74 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSS---------DKTIKIFEVEGETHKLIDTLTGHEG----PVWRVDWAHPKFGTILASCS-- 74 (753)
T ss_dssp CCEEEECCCSSSCCEEEEET---------TTEEEEEEEETTEEEEEEEECCCSS----CEEEEEECCTTSCSEEEEEE--
T ss_pred ceeEEEEECCCCCeEEEEEC---------CCcEEEEecCCCCCccceeccCCcC----ceEEEEecCCCCCCEEEEEe--
Confidence 46889999999999988652 45677777764433222 222222 2778999988 88888762
Q ss_pred CCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe---eeecCCC-cccccccc
Q 002164 265 LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT---VKEIGPP-AVYTSLDP 339 (958)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~---~~~l~~~-~~~~~~~~ 339 (958)
..+.|.++++ +++ ...+... ..+..++|
T Consensus 75 -----------------------------------------------~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~ 107 (753)
T 3jro_A 75 -----------------------------------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQW 107 (753)
T ss_dssp -----------------------------------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred -----------------------------------------------CCCeEEEEECCCCcccccccccCCCCCeEEEEE
Confidence 1234667777 663 3344434 77889999
Q ss_pred CCC--CcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeec---------
Q 002164 340 SPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRS--------- 408 (958)
Q Consensus 340 SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~sp--------- 408 (958)
+|+ |+.|+..+.+ +.|.+||+.++........ ......+..+.|+|
T Consensus 108 sp~~~~~~l~sgs~d-------------g~I~vwdl~~~~~~~~~~~----------~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 108 APHEYGPLLLVASSD-------------GKVSVVEFKENGTTSPIII----------DAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp CCGGGCSEEEEEETT-------------SEEEEEECCSSSCCCCEEE----------ECCSSCEEEEEECCCC-------
T ss_pred CCCCCCCEEEEEeCC-------------CcEEEEEeecCCCcceeEe----------ecCCCceEEEEecCccccccccc
Confidence 999 8988888733 4899999985522111110 11124557888999
Q ss_pred ----CCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCc----eEEEeeccccCceeeecC---CceEEEEEecc
Q 002164 409 ----DKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP----EILHKLDLRYGGISWCDD---SLALVYESWYK 477 (958)
Q Consensus 409 ----DG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~----~~l~~~~~~~~~~~~spD---g~~l~~~~~~~ 477 (958)
||+.++.. +..+.|.+|++ ..+... ..+..+...+..++|+|+ |+.|+....++
T Consensus 165 ~~~~d~~~l~sg-------------s~dg~I~iwd~--~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 165 NGTKESRKFVTG-------------GADNLVKIWKY--NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp --CGGGCCEEEE-------------ETTSCEEEEEE--ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred ccCCCCCEEEEE-------------ECCCeEEEEec--cCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 57776663 44567888885 222222 122334566788999999 78777765444
Q ss_pred ccceEEEEEcCCCCCCCcEEE-eccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 478 TRRTRTWVISPGSKDVAPRIL-FDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 478 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
. .++|.+............ .......+.. ++|+|||++|+...
T Consensus 230 ~--I~iwd~~~~~~~~~~~~~~~~~~~~~v~~------l~~spdg~~l~s~s 273 (753)
T 3jro_A 230 T--CIIWTQDNEQGPWKKTLLKEEKFPDVLWR------ASWSLSGNVLALSG 273 (753)
T ss_dssp C--EEEEEESSSSSCCBCCBSSSSCCSSCCCC------EEECTTTCCEEEEC
T ss_pred E--EEEecCCCCCCcceeEEeccCCCCCceEE------EEEcCCCCEEEEEc
Confidence 3 566666543211010111 1111222222 78999999888765
No 366
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.16 E-value=2.8e-09 Score=116.14 Aligned_cols=238 Identities=12% Similarity=0.033 Sum_probs=137.3
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCcccc
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLN 243 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~ 243 (958)
.|++++..+ +..+.+.. .....+..++|+|||+.++.... .......|++++.+++..+.+...... .
T Consensus 67 ~i~~~d~~~----~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~-----~~~~~~~i~~~d~~~~~~~~~~~~~~~--~ 134 (333)
T 2dg1_A 67 NIFKINPET----KEIKRPFV-SHKANPAAIKIHKDGRLFVCYLG-----DFKSTGGIFAATENGDNLQDIIEDLST--A 134 (333)
T ss_dssp EEEEECTTT----CCEEEEEE-CSSSSEEEEEECTTSCEEEEECT-----TSSSCCEEEEECTTSCSCEEEECSSSS--C
T ss_pred EEEEEeCCC----CcEEEEee-CCCCCcceEEECCCCcEEEEeCC-----CCCCCceEEEEeCCCCEEEEEEccCcc--C
Confidence 688888743 44444431 12235788999999975544321 111235899999998877643221110 0
Q ss_pred ccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-C
Q 002164 244 AIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-D 322 (958)
Q Consensus 244 ~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~ 322 (958)
..+..++++|||++++....... .+ ....||+++. +
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~------------------------------------~~-------~~~~l~~~~~~~ 171 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYS------------------------------------TN-------PLGGVYYVSPDF 171 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBT------------------------------------TB-------CCEEEEEECTTS
T ss_pred CcccceEECCCCCEEEEeccccc------------------------------------cC-------CCceEEEEeCCC
Confidence 11567899999975553310000 00 2356899988 5
Q ss_pred CeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc--CceEEEeccCCccccCccccccccc
Q 002164 323 GTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD--GIFVRELCDLPLAEDIPIAFNSVRK 399 (958)
Q Consensus 323 g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~--~~~~~~l~~~~~~~~~p~~~~~~~~ 399 (958)
++.+.+... .....++|+|||+.|++.... .+.|++|+++ ++....+....... +.+ ..
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~------------~~~i~~~d~~~~g~~~~~~~~~~~~~-----~~~-~~ 233 (333)
T 2dg1_A 172 RTVTPIIQNISVANGIALSTDEKVLWVTETT------------ANRLHRIALEDDGVTIQPFGATIPYY-----FTG-HE 233 (333)
T ss_dssp CCEEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEEECTTSSSEEEEEEEEEEE-----CCS-SS
T ss_pred CEEEEeecCCCcccceEECCCCCEEEEEeCC------------CCeEEEEEecCCCcCcccccceEEEe-----cCC-CC
Confidence 666655433 445678999999988887633 2379999985 33332211000000 000 01
Q ss_pred CcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeecc------ccCceeeecCCceEEEE
Q 002164 400 GMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL------RYGGISWCDDSLALVYE 473 (958)
Q Consensus 400 ~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~------~~~~~~~spDg~~l~~~ 473 (958)
.+..+.+++||+ +++. . ...+.|++++. +++....+..... ....++|+|||+.|+++
T Consensus 234 ~~~~i~~d~~G~-l~v~-~-----------~~~~~v~~~d~---~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~ 297 (333)
T 2dg1_A 234 GPDSCCIDSDDN-LYVA-M-----------YGQGRVLVFNK---RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIIC 297 (333)
T ss_dssp EEEEEEEBTTCC-EEEE-E-----------ETTTEEEEECT---TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred CCCceEECCCCC-EEEE-E-----------cCCCEEEEECC---CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEE
Confidence 345688999997 3331 1 12457888884 5544444433222 46778999999888887
Q ss_pred Eeccc--cceEEEEEcCCC
Q 002164 474 SWYKT--RRTRTWVISPGS 490 (958)
Q Consensus 474 ~~~~~--~~~~l~~~~~~~ 490 (958)
...+. ....||.+++..
T Consensus 298 ~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 298 SNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EECGGGTCCEEEEEEECSS
T ss_pred eCccCCCCCceEEEEeccc
Confidence 65532 236788888654
No 367
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.16 E-value=6.2e-10 Score=116.02 Aligned_cols=154 Identities=15% Similarity=0.079 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC-----ceeEEEEeccCCCCCCCC-----CCcc
Q 002164 735 FVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH-----LFCCGIARSGAYNRTLTP-----FGFQ 804 (958)
Q Consensus 735 ~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~~~~~~~~~~-----~~~~ 804 (958)
......+|+.++++.+.++..+ +++.++||||||.+++.++.++|+ +++++|++++.++..... +...
T Consensus 72 ~~~~~a~~l~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~ 149 (254)
T 3ds8_A 72 TPDDWSKWLKIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFK 149 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCS
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccc
Confidence 3567788888888998886433 599999999999999999999987 899999999876643210 0000
Q ss_pred cccchhhhcHHHHHhcCcccccCCCCCCEEEEeeC------CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCC--CCcc
Q 002164 805 NEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGE------EDNNSGTLTMQSDRFFNALKGHGALCRLVILPF--ESHG 876 (958)
Q Consensus 805 ~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~--~~H~ 876 (958)
. ..........+... ...+.+ ++|+|.|||+ .|..|| ...++.+...++.....++...+.+ ++|.
T Consensus 150 ~-~p~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp--~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs 223 (254)
T 3ds8_A 150 K-LPNSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVP--TISSLATRLFMPGSAKAYIEDIQVGEDAVHQ 223 (254)
T ss_dssp S-CSSCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSB--HHHHTGGGGTSBTTBSEEEEEEEESGGGCGG
T ss_pred c-CCcchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEee--HHHHHHHHHHhhccCcceEEEEEeCCCCchh
Confidence 0 00000111111111 111222 6899999999 999999 8888887777766545566667766 6698
Q ss_pred CCCcccHHHHHHHHHHHHHHhh
Q 002164 877 YAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 877 ~~~~~~~~~~~~~i~~fl~~~l 898 (958)
.. .++ .++.+.+..||.++.
T Consensus 224 ~l-~~~-~~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 224 TL-HET-PKSIEKTYWFLEKFK 243 (254)
T ss_dssp GG-GGS-HHHHHHHHHHHHTCC
T ss_pred cc-cCC-HHHHHHHHHHHHHhc
Confidence 64 233 358888999998874
No 368
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.16 E-value=2.6e-09 Score=114.29 Aligned_cols=251 Identities=10% Similarity=0.019 Sum_probs=150.5
Q ss_pred CCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCcc
Q 002164 112 PALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKL 191 (958)
Q Consensus 112 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~ 191 (958)
..+.|+|||+.|+++... . ..|++++..+ + .+.+.. ....+
T Consensus 31 eg~~~d~~g~~l~~~~~~----------------------~----------~~i~~~~~~~----~-~~~~~~--~~~~~ 71 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVR----------------------Q----------NRTWAWSDDG----Q-LSPEMH--PSHHQ 71 (296)
T ss_dssp EEEEEEGGGTEEEEEEGG----------------------G----------TEEEEEETTS----C-EEEEES--SCSSE
T ss_pred cCCeEeCCCCEEEEEeCC----------------------C----------CEEEEEECCC----C-eEEEEC--CCCCc
Confidence 478999999977776642 0 3678888743 3 444432 22356
Q ss_pred cceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCC
Q 002164 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (958)
Q Consensus 192 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~ 271 (958)
..++++|||+.++.. .+...|++++.++|+.+.+...........+..++++|||++++.........
T Consensus 72 ~~l~~~~dg~l~v~~---------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~--- 139 (296)
T 3e5z_A 72 NGHCLNKQGHLIACS---------HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDK--- 139 (296)
T ss_dssp EEEEECTTCCEEEEE---------TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHC---
T ss_pred ceeeECCCCcEEEEe---------cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccc---
Confidence 788999999854442 12468999999888876664321111001145789999998555320000000
Q ss_pred CCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCCC-ccccccccCCCCcEEEEEe
Q 002164 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISS 350 (958)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~ 350 (958)
..+. .....+ .....||.++.+|+.+.+... .....++|||||+.| ++.
T Consensus 140 -----------~~~~------------~~~~~~------~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~l-v~~ 189 (296)
T 3e5z_A 140 -----------PEEG------------YGGEME------LPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLL-VSD 189 (296)
T ss_dssp -----------GGGS------------SCCCCC------SSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEE-EEE
T ss_pred -----------cccc------------cccccc------CCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEE-EEe
Confidence 0000 000000 013468888876766665544 555788999999998 554
Q ss_pred ecCCccccccCCCCCceeEEEecc-CceE---EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 351 IHRPYSFIVPCGRFPRQVGVWTTD-GIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 351 ~~~~~~~~~~~~~~~~~i~l~d~~-~~~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
.. .+.|++|+++ .+.. ..+... . ...+..+.+++||+ |++.
T Consensus 190 ~~------------~~~i~~~~~~~~g~~~~~~~~~~~--~----------~~~p~~i~~d~~G~-l~v~---------- 234 (296)
T 3e5z_A 190 TG------------DNATHRYCLNARGETEYQGVHFTV--E----------PGKTDGLRVDAGGL-IWAS---------- 234 (296)
T ss_dssp TT------------TTEEEEEEECSSSCEEEEEEEECC--S----------SSCCCSEEEBTTSC-EEEE----------
T ss_pred CC------------CCeEEEEEECCCCcCcCCCeEeeC--C----------CCCCCeEEECCCCC-EEEE----------
Confidence 22 3489999986 3333 122111 1 13446789999997 4442
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEeeccccCceee-ecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISW-CDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~-spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
. .+.|++++. +|.....+..... ...++| +||++.|+.++. ..||++++.+.
T Consensus 235 ---~-~~~v~~~~~---~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~~ 287 (296)
T 3e5z_A 235 ---A-GDGVHVLTP---DGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS-----TEFWSIETNVR 287 (296)
T ss_dssp ---E-TTEEEEECT---TSCEEEEEECSSC-CCEEEEESTTSCEEEEEET-----TEEEEEECSCC
T ss_pred ---c-CCeEEEECC---CCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-----CeEEEEEcccc
Confidence 1 456888984 5555555554444 777889 589998888753 25999998774
No 369
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.15 E-value=2.9e-08 Score=109.30 Aligned_cols=282 Identities=13% Similarity=0.067 Sum_probs=146.8
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccc-cCCCCCceEEEEEcCCCceeeccCCCCcc
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAE-DSSSSKLRVWVADVDTGKARPLFQSPDIY 241 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~-~~~~~~~~l~~~~~~~g~~~~lt~~~~~~ 241 (958)
+.++++|..+ + .....+ +.+... .++|||||++|+.+...... ..+.....|.++|+++++...-.......
T Consensus 31 ~~v~v~D~~t-~--~~~~~i---~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 31 SRVHVYDYTN-G--KFLGMV---PTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR 103 (361)
T ss_dssp CEEEEEETTT-C--CEEEEE---ECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB
T ss_pred CeEEEEECCC-C--eEEEEe---cCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc
Confidence 3688988743 2 112223 233334 88999999998886532100 01122456999999887764332211100
Q ss_pred c--cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 242 ~--~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
. ......++++|||++|+++... ....|.++
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~-----------------------------------------------~~~~v~v~ 136 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNAS-----------------------------------------------PATSIGIV 136 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEES-----------------------------------------------SSEEEEEE
T ss_pred cccCCCcceEEECCCCCEEEEECCC-----------------------------------------------CCCeEEEE
Confidence 0 0014578999999999976100 12457788
Q ss_pred Ec-CCeee-e-cCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC-ceEE-EeccCCccccCcccc
Q 002164 320 SL-DGTVK-E-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFVR-ELCDLPLAEDIPIAF 394 (958)
Q Consensus 320 ~~-~g~~~-~-l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~-~~~~-~l~~~~~~~~~p~~~ 394 (958)
|+ +++.. . +..++ ...+.+.|+|+..++.... ++.+.+++.+. +... ........+
T Consensus 137 d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~------------dg~~~~v~~~~~g~~~~~~~~~~~~~------ 197 (361)
T 2oiz_A 137 DVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICG------------DGGLLTINLGEDGKVASQSRSKQMFS------ 197 (361)
T ss_dssp ETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEET------------TSSEEEEEECTTSSEEEEEECCCCSC------
T ss_pred ECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECC------------CCcEEEEEECCCCcEeeeccccceEc------
Confidence 88 66433 3 32111 1113356666433333222 12454555532 2221 111000000
Q ss_pred cccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee-------------ccccCce
Q 002164 395 NSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-------------DLRYGGI 461 (958)
Q Consensus 395 ~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-------------~~~~~~~ 461 (958)
.......+.++|||..+++. ...+.+++++. .++....+... ......+
T Consensus 198 --~~~~~~~~~~~~~g~~~~~~-------------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 198 --VKDDPIFIAPALDKDKAHFV-------------SYYGNVYSADF---SGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp --TTTSCBCSCCEECSSEEEEE-------------BTTSEEEEEEC---SSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred --CCCCceEEEecccCCEEEEE-------------eCCCeEEEEEe---cCCCceecccccccCccccccccccCCeeEE
Confidence 00112234568888777663 33457889985 44443332210 0111237
Q ss_pred eeecCCceEEEEEeccc-------cceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCC
Q 002164 462 SWCDDSLALVYESWYKT-------RRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDE 534 (958)
Q Consensus 462 ~~spDg~~l~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~ 534 (958)
+++|||++++.....++ ....|+++|+.+. +......... .++ +.|||||++|+...
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--~~v~~i~~~~--p~~------ia~spdg~~l~v~n------ 323 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--QRVARIPGRD--ALS------MTIDQQRNLMLTLD------ 323 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--EEEEEEECTT--CCE------EEEETTTTEEEEEC------
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--cEEEEEecCC--eeE------EEECCCCCEEEEeC------
Confidence 89999998876643111 1247999999885 2222221111 232 88999999765432
Q ss_pred CcEEEEccCCCCCCCCCCeEEEEECCCC--ceEEE
Q 002164 535 GTYILLNGNGATPEGNIPFLDLFDINTG--SKERI 567 (958)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~L~~~dl~~g--~~~~l 567 (958)
. ..|.+||++++ +....
T Consensus 324 ---------------~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 324 ---------------G-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp ---------------S-SCEEEEECSSSSCEEEEE
T ss_pred ---------------C-CeEEEEECCCCcceeeEE
Confidence 0 25999999998 55433
No 370
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=2.3e-08 Score=108.80 Aligned_cols=282 Identities=12% Similarity=0.009 Sum_probs=150.6
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccc-cCCCCCceEEEEEcCCCceeeccCCCC-c
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAE-DSSSSKLRVWVADVDTGKARPLFQSPD-I 240 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~-~~~~~~~~l~~~~~~~g~~~~lt~~~~-~ 240 (958)
+.+++.|..+ + ....++ +.+... .+.+||||++|+.+...... ..+.....|.++|+++++...-...+. .
T Consensus 59 ~~V~ViD~~t-~--~v~~~I---~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~ 131 (386)
T 3sjl_D 59 TQQFVIDGEA-G--RVIGMI---DGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 131 (386)
T ss_dssp EEEEEEETTT-T--EEEEEE---EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CEEEEEECCC-C--eEEEEE---ECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc
Confidence 3788888743 1 122233 223333 49999999998886531100 001124569999999987654332221 0
Q ss_pred c--ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEE
Q 002164 241 Y--LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVL 318 (958)
Q Consensus 241 ~--~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~ 318 (958)
. .......++++|||++++++... ....+.+
T Consensus 132 r~~~g~~P~~~a~spDGk~lyVan~~-----------------------------------------------~~~~VsV 164 (386)
T 3sjl_D 132 RFLVGTYPWMTSLTPDGKTLLFYQFS-----------------------------------------------PAPAVGV 164 (386)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEECS-----------------------------------------------SSCEEEE
T ss_pred ccccCCCCceEEEcCCCCEEEEEEcC-----------------------------------------------CCCeEEE
Confidence 0 00014478999999999976100 1235778
Q ss_pred EEc-CCee-eecCCC--------ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccc
Q 002164 319 VSL-DGTV-KEIGPP--------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE 388 (958)
Q Consensus 319 ~~~-~g~~-~~l~~~--------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~ 388 (958)
+|+ +++. ..+.-+ +.-..++.++||+.+++..... +++ + +... .+.. .+
T Consensus 165 ID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~------------g~v-~-~~~~----~~~~---~~ 223 (386)
T 3sjl_D 165 VDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTE------------GTP-E-ITHT----EVFH---PE 223 (386)
T ss_dssp EETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSS------------SCC-E-EEEC----CCCS---CT
T ss_pred EECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCC------------CeE-E-Eeec----ceec---cc
Confidence 888 6643 233211 1111236678887766654221 122 1 1000 0000 00
Q ss_pred cCcccccccccCcceeeee-cCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee-------------
Q 002164 389 DIPIAFNSVRKGMRSINWR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL------------- 454 (958)
Q Consensus 389 ~~p~~~~~~~~~~~~~~~s-pDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~------------- 454 (958)
..|. ...+.|. +||+ ++|. +..+.+|++|. .++..+.+...
T Consensus 224 ~~~~--------~~~~~~~~~dG~-~~~v-------------s~~g~V~v~d~---~~~~~~v~~~~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 224 DEFL--------INHPAYSQKAGR-LVWP-------------TYTGKIHQIDL---SSGDAKFLPAVEALTEAERADGWR 278 (386)
T ss_dssp TSCB--------CSCCEEETTTTE-EEEE-------------BTTSEEEEEEC---TTSSCEECCCEESSCHHHHHTTEE
T ss_pred cccc--------cccceeEcCCCc-EEEE-------------eCCCEEEEEEC---CCCcceeecceecccccccccccc
Confidence 0111 1124564 6775 3442 33567999995 55544333111
Q ss_pred ccccCceeeecCCceEEEEEecc------ccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 455 DLRYGGISWCDDSLALVYESWYK------TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 455 ~~~~~~~~~spDg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
......+++++|+++|+.....+ ....+||++|+.+.+......... ..++ +.+|+||+.++|..
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~---~~~~------lavs~D~~~~ly~t 349 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EIDS------INVSQDEKPLLYAL 349 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECE------EEECSSSSCEEEEE
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC---Ccce------EEECCCCCeEEEEE
Confidence 11233478899999998875421 123689999999863222222221 1222 78999998666665
Q ss_pred eeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCc
Q 002164 529 KKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDK 572 (958)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~ 572 (958)
+. ....|.++|..+++..+-....+
T Consensus 350 n~-------------------~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 350 ST-------------------GDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp ET-------------------TTTEEEEEETTTCCEEEEECCCC
T ss_pred cC-------------------CCCeEEEEECCCCcEEEEecCCC
Confidence 31 11259999999998776655443
No 371
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=7.4e-09 Score=114.82 Aligned_cols=134 Identities=9% Similarity=0.013 Sum_probs=80.3
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceE
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
.+.+++||+.++|... .+.++++|..++..+.+...+..............+...+.++|||+++++
T Consensus 269 ~~~~~~dg~~~~~~s~-------------~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyV 335 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTY-------------TGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYL 335 (426)
T ss_dssp CCEECTTTCEEEEEBT-------------TSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEE
T ss_pred EeeecCCCCEEEEEeC-------------CCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEE
Confidence 4567999999999873 238999999876554433222110000000111133345789999999888
Q ss_pred EEEec-cCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 416 WAETQ-DGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 416 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
..... ++.. ....+.|.++|. ...+....+. .......+.|+|||+.++|..+... ..|.++|+.+.
T Consensus 336 a~~~~~~gth----k~~s~~VsVID~--~T~kvv~~I~-vg~~P~gia~spDg~~~lyv~n~~s--~~VsVID~~t~ 403 (426)
T 3c75_H 336 LVDQRDEWKH----KAASRFVVVLNA--ETGERINKIE-LGHEIDSINVSQDAEPLLYALSAGT--QTLHIYDAATG 403 (426)
T ss_dssp EEEECCTTCT----TSCEEEEEEEET--TTCCEEEEEE-EEEEECEEEECCSSSCEEEEEETTT--TEEEEEETTTC
T ss_pred Eecccccccc----cCCCCEEEEEEC--CCCeEEEEEE-CCCCcCeEEEccCCCEEEEEEcCCC--CeEEEEECCCC
Confidence 64321 1100 012357999996 2333334443 2234667899999996777777543 46999999885
No 372
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=7.4e-09 Score=112.64 Aligned_cols=270 Identities=12% Similarity=0.079 Sum_probs=142.3
Q ss_pred CceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCC-----
Q 002164 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPD----- 187 (958)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~----- 187 (958)
.+.+||||+++...... .+.. .++.....|.++|..+ + .....+. .+.
T Consensus 82 ~va~spDG~~lyVan~~--------------------~~r~---~~G~~~~~VsviD~~t-~--~v~~~I~-v~~g~r~~ 134 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTV--------------------FSRI---ARGERTDYVEVFDPVT-L--LPTADIE-LPDAPRFL 134 (386)
T ss_dssp EEEECTTSSCEEEEEEE--------------------EEET---TEEEEEEEEEEECTTT-C--CEEEEEE-ETTCCCCC
T ss_pred cEEECCCCCEEEEEccc--------------------cccc---ccCCCCCEEEEEECCC-C--eEEEEEE-CCCccccc
Confidence 48999999998776531 0000 0111124678888744 1 2223332 111
Q ss_pred -CCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccc--cc-cceEEecCCeEEEEEec
Q 002164 188 -GAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNA--IF-DNFVWVNNSTLLVCTIP 263 (958)
Q Consensus 188 -~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~--~~-~~~~wspDG~~l~~~~~ 263 (958)
+.......+||||++|+.... .....|.++|+++++...-...+...... .. ..++.++||+++++...
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~-------~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQF-------SPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEEC-------SSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred cCCCCceEEEcCCCCEEEEEEc-------CCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECC
Confidence 224667899999999887642 12568999999998765443322210000 00 12356677776665511
Q ss_pred CCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCCC--cccccccc-C
Q 002164 264 LLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP--AVYTSLDP-S 340 (958)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~~--~~~~~~~~-S 340 (958)
.. ..+ ....+ ..+... .....+.| .
T Consensus 208 ~~------------------------------------------------g~v-~~~~~---~~~~~~~~~~~~~~~~~~ 235 (386)
T 3sjl_D 208 TE------------------------------------------------GTP-EITHT---EVFHPEDEFLINHPAYSQ 235 (386)
T ss_dssp SS------------------------------------------------SCC-EEEEC---CCCSCTTSCBCSCCEEET
T ss_pred CC------------------------------------------------CeE-EEeec---ceeccccccccccceeEc
Confidence 00 001 00001 011111 11223456 4
Q ss_pred CCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEec
Q 002164 341 PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (958)
Q Consensus 341 pDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~ 420 (958)
+||+ ++|.+. .++++++|+.+...+.+..................+...+.++||++++++.....
T Consensus 236 ~dG~-~~~vs~-------------~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~ 301 (386)
T 3sjl_D 236 KAGR-LVWPTY-------------TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 301 (386)
T ss_dssp TTTE-EEEEBT-------------TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred CCCc-EEEEeC-------------CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccc
Confidence 7885 445552 34899999987654443322110000000001113445688899999988864322
Q ss_pred cCCCcccccccCCeEEEEeCCCCCCCCc-eEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 421 DGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 421 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
..+. .....+.|+++|+ .+++. +.+. ......++.+|+||+.++|..+... ..|.++|..++
T Consensus 302 ~~~~---hk~~~~~V~viD~---~t~kv~~~i~-vg~~~~~lavs~D~~~~ly~tn~~~--~~VsViD~~t~ 364 (386)
T 3sjl_D 302 DEWR---HKTASRFVVVLDA---KTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGD--KTLYIHDAESG 364 (386)
T ss_dssp CTTC---TTSCEEEEEEEET---TTCCEEEEEE-EEEEECEEEECSSSSCEEEEEETTT--TEEEEEETTTC
T ss_pred cccc---cCCCCCEEEEEEC---CCCeEEEEEE-CCCCcceEEECCCCCeEEEEEcCCC--CeEEEEECCCC
Confidence 1100 0122357999996 44443 3443 3335678999999987777776544 46899999885
No 373
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.13 E-value=3.7e-10 Score=121.20 Aligned_cols=199 Identities=19% Similarity=0.113 Sum_probs=114.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (958)
.|.||++||..... ++..| ......| ..+|.|+. ++.+|+|.+...........+|+.+.
T Consensus 67 ~~~lvllhG~~~~~---------~~~~~----~~~~~~l-~~~~~v~~---~d~~G~G~s~~~~~~~~~~a~~~~~~--- 126 (300)
T 1kez_A 67 EVTVICCAGTAAIS---------GPHEF----TRLAGAL-RGIAPVRA---VPQPGYEEGEPLPSSMAAVAAVQADA--- 126 (300)
T ss_dssp SSEEEECCCSSTTC---------STTTT----HHHHHHT-SSSCCBCC---CCCTTSSTTCCBCSSHHHHHHHHHHH---
T ss_pred CCeEEEECCCcccC---------cHHHH----HHHHHhc-CCCceEEE---ecCCCCCCCCCCCCCHHHHHHHHHHH---
Confidence 68899999964211 00111 1222223 35799998 56677777654433344555554433
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEeccCCCCCCCC---C-------Cccccc----chhhh
Q 002164 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGAYNRTLTP---F-------GFQNED----RTLWE 812 (958)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~~~~~~~~---~-------~~~~~~----~~~~~ 812 (958)
+.+. .+.+++.++|||+||.+++.++.+.| ++++++|++++........ + .+.... .....
T Consensus 127 l~~~--~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (300)
T 1kez_A 127 VIRT--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLT 204 (300)
T ss_dssp HHHH--CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHH
T ss_pred HHHh--cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHH
Confidence 3332 23468999999999999999999987 4899999988754321100 0 000000 00000
Q ss_pred cHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHH
Q 002164 813 ATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDR 892 (958)
Q Consensus 813 ~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~ 892 (958)
....+...-......++++|+|+++|+ |..++ +.. ..+.+ .....++++++|+ +|.....+....+.+.|.+
T Consensus 205 ~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~--~~~-~~~~~---~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~ 276 (300)
T 1kez_A 205 ALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGP--WPD-DSWKP---TWPFEHDTVAVPG-DHFTMVQEHADAIARHIDA 276 (300)
T ss_dssp HHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSC--CCS-SCCSC---CCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCC--Ccc-cchhh---hcCCCCeEEEecC-CChhhccccHHHHHHHHHH
Confidence 001111111112346789999999995 66665 433 22211 1123578999999 9987533666778888888
Q ss_pred HHHHhh
Q 002164 893 WLQKYC 898 (958)
Q Consensus 893 fl~~~l 898 (958)
||.+..
T Consensus 277 fl~~~~ 282 (300)
T 1kez_A 277 WLGGGN 282 (300)
T ss_dssp HHTCC-
T ss_pred HHHhcc
Confidence 887654
No 374
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.13 E-value=5.3e-09 Score=113.96 Aligned_cols=236 Identities=11% Similarity=-0.004 Sum_probs=135.8
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
....++|+|||+ |+++.. ....|++++.++++.+.+....... +..++|+|||++++..... .
T Consensus 46 ~~~~~~~~~~g~-l~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~----~~~i~~~~dg~l~v~~~~~--~-- 108 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDV--------FEGNIFKINPETKEIKRPFVSHKAN----PAAIKIHKDGRLFVCYLGD--F-- 108 (333)
T ss_dssp CEEEEEECTTSC-EEEEET--------TTCEEEEECTTTCCEEEEEECSSSS----EEEEEECTTSCEEEEECTT--S--
T ss_pred cccCcEECCCCC-EEEEEC--------CCCEEEEEeCCCCcEEEEeeCCCCC----cceEEECCCCcEEEEeCCC--C--
Confidence 457899999998 555431 2458999999998887765222221 6689999999866654100 0
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeee-cCC--C-ccccccccCCCCc
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKE-IGP--P-AVYTSLDPSPDEK 344 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~-l~~--~-~~~~~~~~SpDGk 344 (958)
. ....|++++. ++..+. +.. . ..+..+.++|||+
T Consensus 109 ----------------------------------~-------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 109 ----------------------------------K-------STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp ----------------------------------S-------SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred ----------------------------------C-------CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC
Confidence 0 1235888988 665542 221 1 4466789999997
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
.++....... ......|+.++.+++..+.+.... ..+..+.|+|||+.+++..
T Consensus 148 l~v~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~i~~~~dg~~l~v~~------- 200 (333)
T 2dg1_A 148 FYFTDFRGYS-------TNPLGGVYYVSPDFRTVTPIIQNI-------------SVANGIALSTDEKVLWVTE------- 200 (333)
T ss_dssp EEEEECCCBT-------TBCCEEEEEECTTSCCEEEEEEEE-------------SSEEEEEECTTSSEEEEEE-------
T ss_pred EEEEeccccc-------cCCCceEEEEeCCCCEEEEeecCC-------------CcccceEECCCCCEEEEEe-------
Confidence 5443321100 011246888887766555543210 1235789999999877631
Q ss_pred cccccccCCeEEEEeCCCCCCCCceEEE-----eec--cccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEGPEILH-----KLD--LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~-----~~~--~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 497 (958)
...+.|++++.. .++.....+. ... .....+++++||+ |+++...+ ..|+++++++. ...
T Consensus 201 -----~~~~~i~~~d~~-~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~---~~v~~~d~~g~---~~~ 267 (333)
T 2dg1_A 201 -----TTANRLHRIALE-DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQ---GRVLVFNKRGY---PIG 267 (333)
T ss_dssp -----GGGTEEEEEEEC-TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEETT---TEEEEECTTSC---EEE
T ss_pred -----CCCCeEEEEEec-CCCcCcccccceEEEecCCCCCCCceEECCCCC-EEEEEcCC---CEEEEECCCCC---EEE
Confidence 224578888851 1233332221 111 2345588999997 33333222 35888888542 222
Q ss_pred EeccCCc------cccCCCCCCceEeccCCceEEEEee
Q 002164 498 LFDRSSE------DVYSDPGSPMMRRTSTGTYVIAKIK 529 (958)
Q Consensus 498 ~~~~~~~------~~~~~~~~~~~~~spdG~~l~~~~~ 529 (958)
....... .... +.|+|||+.|++...
T Consensus 268 ~~~~~~~~~g~~~~~~~------~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 268 QILIPGRDEGHMLRSTH------PQFIPGTNQLIICSN 299 (333)
T ss_dssp EEECTTGGGTCSCBCCE------EEECTTSCEEEEEEE
T ss_pred EEEcCCCccccccCcce------EEECCCCCEEEEEeC
Confidence 2222111 1111 778999988877764
No 375
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.11 E-value=2.1e-09 Score=122.14 Aligned_cols=199 Identities=9% Similarity=-0.036 Sum_probs=116.6
Q ss_pred CcccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCC---Ccee--eccCCCCccccccccceEEecCCeEEEEEe
Q 002164 189 AKLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDT---GKAR--PLFQSPDIYLNAIFDNFVWVNNSTLLVCTI 262 (958)
Q Consensus 189 ~~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~---g~~~--~lt~~~~~~~~~~~~~~~wspDG~~l~~~~ 262 (958)
..+...+|+| ||+.|+... ....|.+|++.+ +... .++..... .+..++|+||++.|+...
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s---------~dg~v~vwd~~~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGS---------DQGVIKIWNLKEIIVGEVYSSSLTYDCSS----TVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEE---------TTSEEEEEEHHHHHTTCCCSCSEEEECSS----CEEEEEECTTSSEEEEEE
T ss_pred CceEEEEECCCCCCEEEEec---------CCceEEEeECcccccCcccceeeeccCCC----CEEEEEEeCCCCEEEEEe
Confidence 4689999999 999998865 256788888876 4321 11111121 277999999999998762
Q ss_pred cCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc--CCeeeecC-----------
Q 002164 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTVKEIG----------- 329 (958)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~~l~----------- 329 (958)
.+ +.-.||.++. +|+.....
T Consensus 131 ~d-----------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~ 163 (437)
T 3gre_A 131 KD-----------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRKINLK 163 (437)
T ss_dssp TT-----------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEEEEGG
T ss_pred CC-----------------------------------------------CEEEEEEeccccCCceeeccccceeEEEEcc
Confidence 11 1112333321 22111110
Q ss_pred ---CCcccccc--ccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcce
Q 002164 330 ---PPAVYTSL--DPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRS 403 (958)
Q Consensus 330 ---~~~~~~~~--~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~ 403 (958)
....+..+ .++|||+.|+..+.+ +.|.+||+.++.. ..+...+ ....+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~-----------h~~~v~~ 219 (437)
T 3gre_A 164 NFGKNEYAVRMRAFVNEEKSLLVALTNL-------------SRVIIFDIRTLERLQIIENSP-----------RHGAVSS 219 (437)
T ss_dssp GGSSCCCEEEEEEEECSSCEEEEEEETT-------------SEEEEEETTTCCEEEEEECCG-----------GGCCEEE
T ss_pred CcccccCceEEEEEEcCCCCEEEEEeCC-------------CeEEEEeCCCCeeeEEEccCC-----------CCCceEE
Confidence 11122222 277899988888743 4899999986543 3333211 1135678
Q ss_pred eeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCc-eEEE-eeccccCce----eeecCCceEEEEEecc
Q 002164 404 INWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGP-EILH-KLDLRYGGI----SWCDDSLALVYESWYK 477 (958)
Q Consensus 404 ~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~-~~l~-~~~~~~~~~----~~spDg~~l~~~~~~~ 477 (958)
+.|+|||+.++.. +..+.|.+||+ ..++. ..+. .....+..+ .|+||++.|+....+
T Consensus 220 ~~~s~~~~~l~s~-------------~~dg~i~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d- 282 (437)
T 3gre_A 220 ICIDEECCVLILG-------------TTRGIIDIWDI---RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK- 282 (437)
T ss_dssp EEECTTSCEEEEE-------------ETTSCEEEEET---TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-
T ss_pred EEECCCCCEEEEE-------------cCCCeEEEEEc---CCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC-
Confidence 9999999988763 44567899996 33322 2222 233355666 556677777765433
Q ss_pred ccceEEEEEcCCCC
Q 002164 478 TRRTRTWVISPGSK 491 (958)
Q Consensus 478 ~~~~~l~~~~~~~~ 491 (958)
..|.++++.++
T Consensus 283 ---g~i~iwd~~~~ 293 (437)
T 3gre_A 283 ---TFLTIWNFVKG 293 (437)
T ss_dssp ---EEEEEEETTTT
T ss_pred ---CcEEEEEcCCC
Confidence 34666676654
No 376
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.11 E-value=1.1e-09 Score=112.55 Aligned_cols=145 Identities=10% Similarity=0.075 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC-----CCceeEEEEeccCCCCCCCCCCcccccchh
Q 002164 736 VEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA-----PHLFCCGIARSGAYNRTLTPFGFQNEDRTL 810 (958)
Q Consensus 736 ~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~ 810 (958)
+....+++.++++++.++..+ +++.++||||||.++..++.++ |++++.+|++++.++...... . .....
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~~--~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~--~-~~~~~ 151 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYHF--NHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST--T-AKTSM 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSCC--SEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS--S-CCCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCC--CCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc--c-ccCHH
Confidence 456688899999999887433 6899999999999999999876 678999999988765432110 0 00111
Q ss_pred hhcHHHHHhcCcccccCCCCCCEEEEeeC----CCCCCCCChHHHHHHHHHHHhCCCcEEEEEeC--CCCccCCCcccHH
Q 002164 811 WEATSTYVEMSPFMSANKLKKPILLVHGE----EDNNSGTLTMQSDRFFNALKGHGALCRLVILP--FESHGYAARESIM 884 (958)
Q Consensus 811 ~~~~~~~~~~sp~~~~~~~~~P~Lii~G~----~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p--~~~H~~~~~~~~~ 884 (958)
+ ..+... ...+.+ ++|+|+|+|+ .|..|| ...++.+...++......+.+.+. +++|... .++ .
T Consensus 152 ~---~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp--~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l-~e~-~ 221 (250)
T 3lp5_A 152 F---KELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVP--YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDL-PQN-K 221 (250)
T ss_dssp H---HHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCC--HHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCH-HHH-H
T ss_pred H---HHHHhc--cccCCC-CceEEEEEecCCCCCCceee--HHHHHHHHHHhcccccceEEEEEeCCCCchhcc-hhC-H
Confidence 1 112111 112222 6899999999 999998 777777766666544445555555 4669874 233 2
Q ss_pred HHHHHHHHHHH
Q 002164 885 HVLWETDRWLQ 895 (958)
Q Consensus 885 ~~~~~i~~fl~ 895 (958)
.+.+.|.+||.
T Consensus 222 ~v~~~I~~FL~ 232 (250)
T 3lp5_A 222 QIVSLIRQYLL 232 (250)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHh
Confidence 56666666654
No 377
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.11 E-value=2e-10 Score=132.74 Aligned_cols=274 Identities=8% Similarity=-0.031 Sum_probs=152.6
Q ss_pred CCCCceecCC------CCEEEEEecCCCCCchhcc--------------------cccceeeceeecCCCCCccceeeEe
Q 002164 110 PLPALSFSPQ------RDKILFLKRRALPPLEELA--------------------RPEEKLAGLRIDGKCNTRSRMSFYT 163 (958)
Q Consensus 110 ~~~~~~~SPD------G~~laf~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (958)
.+..++|||+ |+.||..+.+....++++. .+...+..+.+.+.. ....++.++
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCC
Confidence 4567889987 6789888776444444332 222334455555532 344455568
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccce--eecCCC-CeEEEEEeeccccCCCCCceEEEEEcCCCceee-ccCCCC
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFV--TWSQDG-KHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP-LFQSPD 239 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~--~wSPDG-~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~-lt~~~~ 239 (958)
.|.+|++.+ +. .....+..+ ...+..+ .|+||| +.||..+ ....|.+||+.+++... +.....
T Consensus 288 tV~lWD~~~-~~-~~~~~~~~H--~~~V~sv~~~~s~~g~~~laS~S---------~D~tvklWD~~~~~~~~~~~~~~~ 354 (524)
T 2j04_B 288 FVAEFDLTD-PE-VPSFYDQVH--DSYILSVSTAYSDFEDTVVSTVA---------VDGYFYIFNPKDIATTKTTVSRFR 354 (524)
T ss_dssp EEEEEETTB-CS-SCSEEEECS--SSCEEEEEEECCTTSCCEEEEEE---------TTSEEEEECGGGHHHHCEEEEECS
T ss_pred EEEEEECCC-CC-CceEEeecc--cccEEEEEEEcCCCCCeEEEEec---------cCCeEEEEECCCCCcccccccccc
Confidence 899999964 11 122234443 2467777 689998 6666654 25688888987765322 111111
Q ss_pred ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 240 IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 240 ~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
.. .+..++|+|||+.|+.+. ....+.++
T Consensus 355 ~~---~v~~v~fsp~~~~l~s~~-------------------------------------------------~d~tv~lw 382 (524)
T 2j04_B 355 GS---NLVPVVYCPQIYSYIYSD-------------------------------------------------GASSLRAV 382 (524)
T ss_dssp CC---SCCCEEEETTTTEEEEEC-------------------------------------------------SSSEEEEE
T ss_pred cC---cccceEeCCCcCeEEEeC-------------------------------------------------CCCcEEEE
Confidence 00 145789999999887651 12246677
Q ss_pred Ec-CCe-eeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccc
Q 002164 320 SL-DGT-VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNS 396 (958)
Q Consensus 320 ~~-~g~-~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~ 396 (958)
++ ++. ...+... ..+..++|||||+.|+..+. ++.+.+|++.++. +..+..... + .
T Consensus 383 d~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~-------------Dgtv~lwd~~~~~---~~~~~~~~~---~--~ 441 (524)
T 2j04_B 383 PSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSA-------------DGSLIITNAARRL---LHGIKNSSA---T--Q 441 (524)
T ss_dssp ETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEET-------------TTEEECCBSCSST---TTCC-----------C
T ss_pred ECcccccceeeecCCCceEEEEeCCCCCeEEEEEC-------------CCEEEEEechHhh---ccccccCcc---c--e
Confidence 77 654 2444444 67889999999999887763 3489999986532 111100000 0 0
Q ss_pred cccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCc---eEEEE
Q 002164 397 VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSL---ALVYE 473 (958)
Q Consensus 397 ~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~---~l~~~ 473 (958)
....+..++|||||+.+.++ ....++.+.. +|.....+..+...+..++|+|++. .|+..
T Consensus 442 ~~~~v~~v~~sp~g~~~~~~--------------~~~~~~~~~~---~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg 504 (524)
T 2j04_B 442 KSLRLWKWDYSIKDDKYRID--------------SSYEVYPLTV---NDVSKAKIDAHGINITCTKWNETSAGGKCYAFS 504 (524)
T ss_dssp CCCEEEECBCCSSSCEEEEC--------------CCCCCCC----------------CCCSCCCEEECCSTTTTTEEEEE
T ss_pred eeeEEEEeccCCCCCeEEcc--------------CCceeccccc---CCcceeeecCCCceEEEEECCCCCCccHHHHhh
Confidence 00123467899999844331 1111222221 3445556666777899999999965 66665
Q ss_pred EeccccceEEEEEcCC
Q 002164 474 SWYKTRRTRTWVISPG 489 (958)
Q Consensus 474 ~~~~~~~~~l~~~~~~ 489 (958)
...+. .+||.++..
T Consensus 505 ~~~g~--vrlw~l~~~ 518 (524)
T 2j04_B 505 NSAGL--LTLEYLSLE 518 (524)
T ss_dssp CTTSE--EEEEECSCC
T ss_pred ccCce--EEEEEcccc
Confidence 43333 667766543
No 378
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.11 E-value=2.6e-08 Score=113.99 Aligned_cols=284 Identities=11% Similarity=0.044 Sum_probs=165.5
Q ss_pred eecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002164 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (958)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (958)
.+++|+++|+... ....|.+|++.+++........... +..++|+|++ .|+...
T Consensus 127 ~~~~~~~~l~sgs---------~dg~i~vwd~~~~~~~~~~~~h~~~----V~~l~~~~~~-~l~s~s------------ 180 (464)
T 3v7d_B 127 CLQFEDNYVITGA---------DDKMIRVYDSINKKFLLQLSGHDGG----VWALKYAHGG-ILVSGS------------ 180 (464)
T ss_dssp EEEEETTEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEECSTT-EEEEEE------------
T ss_pred EEEECCCEEEEEc---------CCCcEEEEECCCCcEEEEEeCCCcC----EEEEEEcCCC-EEEEEe------------
Confidence 4555788887754 2568999999988765544333322 7789999999 555441
Q ss_pred CCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-ccccccccC--CCCcEEEEE
Q 002164 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPS--PDEKYILIS 349 (958)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~S--pDGk~l~~~ 349 (958)
..+.|.++++ +|+.. .+... ..+..++|+ +|++.|+..
T Consensus 181 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~ 223 (464)
T 3v7d_B 181 -------------------------------------TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 223 (464)
T ss_dssp -------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEE
T ss_pred -------------------------------------CCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEE
Confidence 2345778888 77543 34333 667777777 688888877
Q ss_pred eecCCccccccCCCCCceeEEEeccCceEEEeccCCcc--------ccCcc---cccccccCcceeeeecCCCCceEEEE
Q 002164 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLA--------EDIPI---AFNSVRKGMRSINWRSDKPSTLYWAE 418 (958)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~--------~~~p~---~~~~~~~~~~~~~~spDG~~l~~~~~ 418 (958)
+.+ +.+.+||+.+............ ...+. ...+ ....-..++++|+.++..
T Consensus 224 s~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~-- 286 (464)
T 3v7d_B 224 SRD-------------NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG--HMASVRTVSGHGNIVVSG-- 286 (464)
T ss_dssp ETT-------------SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC--CSSCEEEEEEETTEEEEE--
T ss_pred cCC-------------CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC--ccceEEEEcCCCCEEEEE--
Confidence 633 4899999985432211000000 00000 0001 011223457888777663
Q ss_pred eccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEE
Q 002164 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRIL 498 (958)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 498 (958)
+..+.|.+||+ ..+.....+..+...+..+.|+|+|+.|+..+.++. |.++++.++ +....
T Consensus 287 -----------~~d~~i~vwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~----i~vwd~~~~--~~~~~ 347 (464)
T 3v7d_B 287 -----------SYDNTLIVWDV--AQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT----IRIWDLENG--ELMYT 347 (464)
T ss_dssp -----------ETTSCEEEEET--TTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC----EEEEETTTT--EEEEE
T ss_pred -----------eCCCeEEEEEC--CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc----EEEEECCCC--cEEEE
Confidence 44667999996 233333344445666788999999999887754432 555666653 33333
Q ss_pred eccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccce
Q 002164 499 FDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYET 578 (958)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~ 578 (958)
.......+.. +.|+ +++|+.... ...|.+||+.+++..........
T Consensus 348 ~~~h~~~v~~------~~~~--~~~l~s~s~---------------------dg~v~vwd~~~~~~~~~~~~~~~----- 393 (464)
T 3v7d_B 348 LQGHTALVGL------LRLS--DKFLVSAAA---------------------DGSIRGWDANDYSRKFSYHHTNL----- 393 (464)
T ss_dssp ECCCSSCEEE------EEEC--SSEEEEEET---------------------TSEEEEEETTTCCEEEEEECTTC-----
T ss_pred EeCCCCcEEE------EEEc--CCEEEEEeC---------------------CCcEEEEECCCCceeeeecCCCC-----
Confidence 3333333222 4454 566666552 12599999988765444332211
Q ss_pred eEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeE
Q 002164 579 TVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQ 623 (958)
Q Consensus 579 ~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~ 623 (958)
.....|+++++.++... ...+.++++.+++...
T Consensus 394 -------~~~~~~~~~~~~l~~~~-----dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 394 -------SAITTFYVSDNILVSGS-----ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp -------CCEEEEEECSSEEEEEE-----TTEEEEEETTTCCEEE
T ss_pred -------ccEEEEEeCCCEEEEec-----CCeEEEEECCCCcEEe
Confidence 11246788888665533 2579999998887543
No 379
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=6.2e-09 Score=113.98 Aligned_cols=239 Identities=9% Similarity=-0.037 Sum_probs=137.9
Q ss_pred ceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCcccc
Q 002164 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNF 193 (958)
Q Consensus 114 ~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~ 193 (958)
.++++|++.++....+ +.|++|++.. + .....+. ...+..
T Consensus 42 ~~~~~d~~~l~sg~~D---------------------------------g~v~iwd~~~-~--~~~~~~~----~~~v~~ 81 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCED---------------------------------GALHFTQLKD-S--KTITTIT----TPNPRT 81 (343)
T ss_dssp SSSSEEEEEEEEEEET---------------------------------TEEEEEEESS-S--SCEEEEE----EECCCT
T ss_pred hhhcCCCCEEEEECCC---------------------------------CcEEEEECCC-C--cEEEEEe----cCCcee
Confidence 4567888888887765 5899999964 2 2222332 123555
Q ss_pred eeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCce-eeccCCCCccccccccceEEec--CCeEEEEEecCCCCCCC
Q 002164 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPLFQSPDIYLNAIFDNFVWVN--NSTLLVCTIPLLRGDPP 270 (958)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~-~~lt~~~~~~~~~~~~~~~wsp--DG~~l~~~~~~~~~~~~ 270 (958)
..|+|+ ++.........--+....+.+++..+++. +........ .+..++|+| +|+.|+...
T Consensus 82 ~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~s~s-------- 146 (343)
T 3lrv_A 82 GGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN----EIIYMYGHNEVNTEYFIWAD-------- 146 (343)
T ss_dssp TCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSS----CEEEEECCC---CCEEEEEE--------
T ss_pred eeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCC----CEEEEEcCCCCCCCEEEEEe--------
Confidence 566665 33221100000000122344556666652 222211111 267899999 999988662
Q ss_pred CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecC-CC--ccccccccCCCCcEE
Q 002164 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG-PP--AVYTSLDPSPDEKYI 346 (958)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~-~~--~~~~~~~~SpDGk~l 346 (958)
....|.++++ +++...+. .. ..+..++|+|||+.|
T Consensus 147 -----------------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~l 185 (343)
T 3lrv_A 147 -----------------------------------------NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLL 185 (343)
T ss_dssp -----------------------------------------TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEE
T ss_pred -----------------------------------------CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEE
Confidence 2245778888 77654433 22 467889999999999
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEE--EeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR--ELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~--~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
+..+. ++.|.+||+.++... .+.. .+...+..+.|+|||+.|+..
T Consensus 186 asg~~-------------dg~i~iwd~~~~~~~~~~~~~------------~h~~~v~~l~fs~~g~~l~s~-------- 232 (343)
T 3lrv_A 186 ALYSP-------------DGILDVYNLSSPDQASSRFPV------------DEEAKIKEVKFADNGYWMVVE-------- 232 (343)
T ss_dssp EEECT-------------TSCEEEEESSCTTSCCEECCC------------CTTSCEEEEEECTTSSEEEEE--------
T ss_pred EEEcC-------------CCEEEEEECCCCCCCccEEec------------cCCCCEEEEEEeCCCCEEEEE--------
Confidence 87763 348999999865432 2222 012456789999999988773
Q ss_pred cccccccCCeEEEEeCCCCCCCCceEEEe---eccccC--ceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHK---LDLRYG--GISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~---~~~~~~--~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
+ .+.|.+||+ ..+.....+.. ....+. .++|+|+|++|+..+..++ ..+||.++...
T Consensus 233 -----~-~~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~-~i~v~~~~~~~ 294 (343)
T 3lrv_A 233 -----C-DQTVVCFDL--RKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN-SLTIYKFDKKT 294 (343)
T ss_dssp -----E-SSBEEEEET--TSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT-EEEEEEECTTT
T ss_pred -----e-CCeEEEEEc--CCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC-cEEEEEEcccc
Confidence 2 347899996 23332222221 223333 3999999999988765232 26777776443
No 380
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.11 E-value=1.8e-10 Score=132.42 Aligned_cols=208 Identities=16% Similarity=0.046 Sum_probs=128.2
Q ss_pred EEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCC-CCCCCCcc
Q 002164 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTP-IIGEGDEE 730 (958)
Q Consensus 652 l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~-~~G~G~~~ 730 (958)
+...+|.|.+.... .++|+||++|||++..+. ...+.. ........+|++|+.++|+- ..|++...
T Consensus 86 l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~--------~~~~~~---~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~ 152 (522)
T 1ukc_A 86 LFINVFKPSTATSQ--SKLPVWLFIQGGGYAENS--------NANYNG---TQVIQASDDVIVFVTFNYRVGALGFLASE 152 (522)
T ss_dssp CEEEEEEETTCCTT--CCEEEEEEECCSTTTSCC--------SCSCCC---HHHHHHTTSCCEEEEECCCCHHHHHCCCH
T ss_pred CEEEEEECCCCCCC--CCCCEEEEECCCccccCC--------ccccCc---HHHHHhcCCcEEEEEecccccccccccch
Confidence 55578899764322 348999999999765432 112211 11111125699999988873 23444332
Q ss_pred cch--hhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC----CCceeEEEEeccCCCCCCCCC
Q 002164 731 AND--RFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA----PHLFCCGIARSGAYNRTLTPF 801 (958)
Q Consensus 731 ~~~--~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~~~~~~~~~~~ 801 (958)
... ..+...+.|+.+|++|++++- ..|++||.|+|+|+||.++..++... +.+|+++|+.+|.+......
T Consensus 153 ~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~- 231 (522)
T 1ukc_A 153 KVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTV- 231 (522)
T ss_dssp HHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCS-
T ss_pred hccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCH-
Confidence 111 123567899999999999862 36999999999999999887776653 57899999999975422211
Q ss_pred Ccccccchhhh-------------cHHHHHhcCccc---------ccCCCCCC--EEEEeeCCCCCCCCChHHHHHHHHH
Q 002164 802 GFQNEDRTLWE-------------ATSTYVEMSPFM---------SANKLKKP--ILLVHGEEDNNSGTLTMQSDRFFNA 857 (958)
Q Consensus 802 ~~~~~~~~~~~-------------~~~~~~~~sp~~---------~~~~~~~P--~Lii~G~~D~~v~~~~~~~~~~~~~ 857 (958)
......+. ..+.+...++.. .......| .+.++...|..+. +++..+++++
T Consensus 232 ---~~~~~~~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l--~~~p~~~~~~ 306 (522)
T 1ukc_A 232 ---SEMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLV--PDELYNAFDA 306 (522)
T ss_dssp ---GGGHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSS--CSCHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCccc--CCCHHHHHhc
Confidence 00000000 011122211111 11112234 5566777787765 6778888777
Q ss_pred HHhCCCcEEEEEeCCCCccCC
Q 002164 858 LKGHGALCRLVILPFESHGYA 878 (958)
Q Consensus 858 l~~~g~~~~~~~~p~~~H~~~ 878 (958)
-+..++++-+-...+++|.+.
T Consensus 307 g~~~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 307 GNFIKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp TCSCCCCEEEEEETBGGGGTS
T ss_pred CCCCCCCEEEEeecchhHHhh
Confidence 666778888888899999875
No 381
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.10 E-value=8.3e-09 Score=112.01 Aligned_cols=233 Identities=13% Similarity=0.040 Sum_probs=142.5
Q ss_pred CceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCccc
Q 002164 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLN 192 (958)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~ 192 (958)
.+.|+||++.++++... . ..|++++..+ +..+.+. .+ ..+.
T Consensus 53 gp~~~~~~~~l~~~d~~----------------------~----------~~i~~~d~~~----~~~~~~~-~~--~~v~ 93 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNIL----------------------E----------RELHELHLAS----GRKTVHA-LP--FMGS 93 (326)
T ss_dssp EEEEETTTTEEEEEEGG----------------------G----------TEEEEEETTT----TEEEEEE-CS--SCEE
T ss_pred CCeEeCCCCEEEEEECC----------------------C----------CEEEEEECCC----CcEEEEE-CC--Ccce
Confidence 67899999888887642 0 3688888743 4444343 22 3577
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002164 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (958)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (958)
.+.|+|||+.++.+ ...|++++.++|+.+.+...........+..++++|||++.+.......
T Consensus 94 ~i~~~~dg~l~v~~-----------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~------ 156 (326)
T 2ghs_A 94 ALAKISDSKQLIAS-----------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA------ 156 (326)
T ss_dssp EEEEEETTEEEEEE-----------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC------
T ss_pred EEEEeCCCeEEEEE-----------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC------
Confidence 88999999866653 2259999999988876654322110112567889999985442210000
Q ss_pred CCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCCC-ccccccccCCCCcEEEEEee
Q 002164 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISSI 351 (958)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~ 351 (958)
. .....||+++ +|+.+.+... .....++|||||+.|++...
T Consensus 157 -----------------------------~--------~~~~~l~~~~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 157 -----------------------------E--------TGAGSIYHVA-KGKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp -----------------------------C--------TTCEEEEEEE-TTEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred -----------------------------C--------CCceEEEEEe-CCcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 0 0235689998 7876665443 44567899999999988753
Q ss_pred cCCccccccCCCCCceeEEEecc--Cc-eE---EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCc
Q 002164 352 HRPYSFIVPCGRFPRQVGVWTTD--GI-FV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (958)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~l~d~~--~~-~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 425 (958)
. .+.|++++++ ++ .. +.+...... ...+..+.+++||. +++. .
T Consensus 199 ~------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~----------~~~p~gi~~d~~G~-lwva-~------- 247 (326)
T 2ghs_A 199 K------------VNRLMRVPLDARTGLPTGKAEVFIDSTGI----------KGGMDGSVCDAEGH-IWNA-R------- 247 (326)
T ss_dssp T------------TCEEEEEEBCTTTCCBSSCCEEEEECTTS----------SSEEEEEEECTTSC-EEEE-E-------
T ss_pred C------------CCEEEEEEcccccCCcccCceEEEECCCC----------CCCCCeeEECCCCC-EEEE-E-------
Confidence 2 2489999985 33 21 122111100 02235688889985 3331 1
Q ss_pred ccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeee-cCCceEEEEEecc
Q 002164 426 KVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWC-DDSLALVYESWYK 477 (958)
Q Consensus 426 ~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~s-pDg~~l~~~~~~~ 477 (958)
...+.|++++. ++.....+......+..++|+ ||++.|+++....
T Consensus 248 ----~~~~~v~~~d~---~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 248 ----WGEGAVDRYDT---DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ----ETTTEEEEECT---TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred ----eCCCEEEEECC---CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 12346888884 554444554344456778998 8998888776543
No 382
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.09 E-value=1.2e-07 Score=107.69 Aligned_cols=311 Identities=11% Similarity=0.020 Sum_probs=178.6
Q ss_pred eecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCcccce
Q 002164 115 SFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFV 194 (958)
Q Consensus 115 ~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~ 194 (958)
.+++||++|+..+.+ +.|.+|++.+ + .....+.+ +...+...
T Consensus 124 ~~~~~g~~l~sg~~d---------------------------------g~i~vwd~~~-~--~~~~~~~~--h~~~v~~~ 165 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDD---------------------------------NTLKVWSAVT-G--KCLRTLVG--HTGGVWSS 165 (445)
T ss_dssp EEEEETTEEEEEETT---------------------------------SCEEEEETTT-C--CEEEECCC--CSSCEEEE
T ss_pred EEEEcCCEEEEEECC---------------------------------CcEEEEECCC-C--cEEEEEcC--CCCCEEEE
Confidence 578889998887765 5799999854 2 23344443 23467788
Q ss_pred eecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002164 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (958)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (958)
.|+ ++.|+... ....|.+|++.+++........... +..+.|+ ++.|+...
T Consensus 166 ~~~--~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~--~~~l~s~s------------ 216 (445)
T 2ovr_B 166 QMR--DNIIISGS---------TDRTLKVWNAETGECIHTLYGHTST----VRCMHLH--EKRVVSGS------------ 216 (445)
T ss_dssp EEE--TTEEEEEE---------TTSCEEEEETTTTEEEEEECCCSSC----EEEEEEE--TTEEEEEE------------
T ss_pred Eec--CCEEEEEe---------CCCeEEEEECCcCcEEEEECCCCCc----EEEEEec--CCEEEEEe------------
Confidence 887 55666644 2568899999988765544333322 5566774 45566541
Q ss_pred CCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccccCCCCcEEEEEee
Q 002164 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYILISSI 351 (958)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDGk~l~~~~~ 351 (958)
..+.|.++++ +++. ..+... ..+..+.| ||+.|+..+.
T Consensus 217 -------------------------------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 217 -------------------------------------RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp -------------------------------------TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET
T ss_pred -------------------------------------CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC
Confidence 2345778888 6643 333333 55666666 8888887763
Q ss_pred cCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccc
Q 002164 352 HRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (958)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~ 430 (958)
+ +.+.+||+.++.. ..+..+. ..+..+.| ||+.++.. +
T Consensus 258 d-------------g~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~~-------------~ 296 (445)
T 2ovr_B 258 D-------------FMVKVWDPETETCLHTLQGHT-------------NRVYSLQF--DGIHVVSG-------------S 296 (445)
T ss_dssp T-------------SCEEEEEGGGTEEEEEECCCS-------------SCEEEEEE--CSSEEEEE-------------E
T ss_pred C-------------CEEEEEECCCCcEeEEecCCC-------------CceEEEEE--CCCEEEEE-------------e
Confidence 3 4899999986543 3332211 23345566 77776652 4
Q ss_pred cCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecc---CCcccc
Q 002164 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR---SSEDVY 507 (958)
Q Consensus 431 ~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~ 507 (958)
..+.|.+|++ ..+.....+......+. .++++++.|+.....+ .|.++++..+ +....... ....+
T Consensus 297 ~d~~i~i~d~--~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~dg----~i~vwd~~~~--~~~~~~~~~~~~~~~v- 365 (445)
T 2ovr_B 297 LDTSIRVWDV--ETGNCIHTLTGHQSLTS--GMELKDNILVSGNADS----TVKIWDIKTG--QCLQTLQGPNKHQSAV- 365 (445)
T ss_dssp TTSCEEEEET--TTCCEEEEECCCCSCEE--EEEEETTEEEEEETTS----CEEEEETTTC--CEEEEECSTTSCSSCE-
T ss_pred CCCeEEEEEC--CCCCEEEEEcCCcccEE--EEEEeCCEEEEEeCCC----eEEEEECCCC--cEEEEEccCCCCCCCE-
Confidence 4567899996 23333333333333333 3445677776665333 2555566553 22332222 11111
Q ss_pred CCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEec-CCcccccceeEeecCCC
Q 002164 508 SDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWE-SDKEKYYETTVALMSDQ 586 (958)
Q Consensus 508 ~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~-~~~~~~~~~~~~~~~~~ 586 (958)
.+...++++|+.... ...|.+||+.+++..+... .........+.
T Consensus 366 -------~~~~~~~~~l~s~~~---------------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~------ 411 (445)
T 2ovr_B 366 -------TCLQFNKNFVITSSD---------------------DGTVKLWDLKTGEFIRNLVTLESGGSGGVVW------ 411 (445)
T ss_dssp -------EEEEECSSEEEEEET---------------------TSEEEEEETTTCCEEEEEEECTTGGGTCEEE------
T ss_pred -------EEEEECCCEEEEEeC---------------------CCeEEEEECCCCceeeeeeccccCCCCceEE------
Confidence 223335666666552 1269999999887655431 11000000112
Q ss_pred ccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002164 587 TEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (958)
Q Consensus 587 ~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~ 618 (958)
..+|++++..++...........++++|...
T Consensus 412 -~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 412 -RIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp -EEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred -EEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 2468888876666666555567788888654
No 383
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.09 E-value=2.1e-08 Score=111.24 Aligned_cols=283 Identities=11% Similarity=0.006 Sum_probs=147.0
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccc-cCCCCCceEEEEEcCCCceeeccCCC-Ccc
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAE-DSSSSKLRVWVADVDTGKARPLFQSP-DIY 241 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~-~~~~~~~~l~~~~~~~g~~~~lt~~~-~~~ 241 (958)
.|.++|+.+ + ....++ +-+... .+.+||||++|+.+...... ..+.....|.++|+.+++...-...+ ..+
T Consensus 100 ~VsVID~~t-~--~vv~~I---~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r 172 (426)
T 3c75_H 100 QQFVIDGST-G--RILGMT---DGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR 172 (426)
T ss_dssp EEEEEETTT-T--EEEEEE---EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC
T ss_pred eEEEEECCC-C--EEEEEE---ECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc
Confidence 678888744 1 122233 223334 89999999999887531100 00112457999999998765432222 000
Q ss_pred c--cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEE
Q 002164 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLV 319 (958)
Q Consensus 242 ~--~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~ 319 (958)
. ......++++|||++|+++... ....|.++
T Consensus 173 ~~~g~~P~~~~~spDGk~lyV~n~~-----------------------------------------------~~~~VsVI 205 (426)
T 3c75_H 173 FLVGTYQWMNALTPDNKNLLFYQFS-----------------------------------------------PAPAVGVV 205 (426)
T ss_dssp CCBSCCGGGSEECTTSSEEEEEECS-----------------------------------------------SSCEEEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEecC-----------------------------------------------CCCeEEEE
Confidence 0 0014578999999999987100 12458888
Q ss_pred Ec-CCeee-ecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE-Eec-cCCccccCccccc
Q 002164 320 SL-DGTVK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELC-DLPLAEDIPIAFN 395 (958)
Q Consensus 320 ~~-~g~~~-~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~-~~~~~~~~p~~~~ 395 (958)
|+ +++.. .+.-++. ....|+|++.++.... ++++.++++..+... ..+ .... ...|.
T Consensus 206 D~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~------------dG~~~~V~~~~~~v~~~~~~~~~v-~~~p~--- 266 (426)
T 3c75_H 206 DLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCR------------DGSLARVDFADGETKVTNTEVFHT-EDELL--- 266 (426)
T ss_dssp ETTTTEEEEEEECCSE---EEEEEEETTEEEEEET------------TSSEEEEECCTTCCEEEECCCCSC-TTSCB---
T ss_pred ECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcC------------CCCEEEEECCCCcEEEEeeeeecc-CCCce---
Confidence 88 66432 3322211 1223333332222211 112333333222111 110 0000 00010
Q ss_pred ccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe-------------eccccCcee
Q 002164 396 SVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-------------LDLRYGGIS 462 (958)
Q Consensus 396 ~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~-------------~~~~~~~~~ 462 (958)
...+.+++||+.+++. ...+.++++|. .++....+.. .......++
T Consensus 267 -----~~~~~~~~dg~~~~~~-------------s~~g~V~ViD~---~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va 325 (426)
T 3c75_H 267 -----INHPAFSLRSGRLVWP-------------TYTGKIFQADL---TAEGATFRAPIEALTEAERADDWRPGGWQQTA 325 (426)
T ss_dssp -----CSCCEECTTTCEEEEE-------------BTTSEEEEEEE---CSSCEEECCCEESSCTTTGGGTEEECSSSCEE
T ss_pred -----eeEeeecCCCCEEEEE-------------eCCCcEEEEec---cCCceEEeeeeeeccccccccccccCCceeeE
Confidence 1235689999988884 23457888885 4433322211 011123478
Q ss_pred eecCCceEEEEEecc------ccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCc
Q 002164 463 WCDDSLALVYESWYK------TRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGT 536 (958)
Q Consensus 463 ~spDg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~ 536 (958)
++|||++|+...... .....|+++|+.+.+.......... ..+ +.|+|||+.++|..+.
T Consensus 326 ~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~---P~g------ia~spDg~~~lyv~n~------ 390 (426)
T 3c75_H 326 YHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE---IDS------INVSQDAEPLLYALSA------ 390 (426)
T ss_dssp EEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE---ECE------EEECCSSSCEEEEEET------
T ss_pred EcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC---cCe------EEEccCCCEEEEEEcC------
Confidence 999999888764321 1125799999988632111111111 112 7899999955555531
Q ss_pred EEEEccCCCCCCCCCCeEEEEECCCCceEEEe
Q 002164 537 YILLNGNGATPEGNIPFLDLFDINTGSKERIW 568 (958)
Q Consensus 537 ~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~ 568 (958)
....|.++|+.+++..+-.
T Consensus 391 -------------~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 391 -------------GTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp -------------TTTEEEEEETTTCCEEEEE
T ss_pred -------------CCCeEEEEECCCCCEEEEe
Confidence 1236999999999876554
No 384
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.08 E-value=2.7e-08 Score=106.34 Aligned_cols=246 Identities=10% Similarity=-0.007 Sum_probs=144.3
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
....|+|+|||+.|+++.. ....|++++.+++ .+.+...... +..++++|||++++...
T Consensus 29 ~~eg~~~d~~g~~l~~~~~--------~~~~i~~~~~~~~-~~~~~~~~~~-----~~~l~~~~dg~l~v~~~------- 87 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDV--------RQNRTWAWSDDGQ-LSPEMHPSHH-----QNGHCLNKQGHLIACSH------- 87 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEG--------GGTEEEEEETTSC-EEEEESSCSS-----EEEEEECTTCCEEEEET-------
T ss_pred cccCCeEeCCCCEEEEEeC--------CCCEEEEEECCCC-eEEEECCCCC-----cceeeECCCCcEEEEec-------
Confidence 4577999999998888653 2458999999988 6555432221 56889999998665430
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC------ccccccccCCC
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------AVYTSLDPSPD 342 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~------~~~~~~~~SpD 342 (958)
....|++++. +|+.+.+... ..+..++++||
T Consensus 88 ------------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 125 (296)
T 3e5z_A 88 ------------------------------------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD 125 (296)
T ss_dssp ------------------------------------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT
T ss_pred ------------------------------------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC
Confidence 2245888888 8876655432 23457899999
Q ss_pred CcEEEEEeecCCcc----ccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEE
Q 002164 343 EKYILISSIHRPYS----FIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (958)
Q Consensus 343 Gk~l~~~~~~~~~~----~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~ 418 (958)
|+.++..+...... .........+.|+.++.+ +..+.+.... ..+..++|+|||+.+ +. +
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~gi~~s~dg~~l-v~-~ 189 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------VKPNGLAFLPSGNLL-VS-D 189 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------SSEEEEEECTTSCEE-EE-E
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------CCCccEEECCCCCEE-EE-e
Confidence 98444321000000 000000112367777776 4444432211 233578999999987 42 1
Q ss_pred eccCCCcccccccCCeEEEEeCCCCCCCCc---eEEEe-eccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCC
Q 002164 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEGP---EILHK-LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVA 494 (958)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~-~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~ 494 (958)
...+.|++++. ...++. ..+.. .......+++++||+ |+++. + ..|+++++++.
T Consensus 190 -----------~~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~---~~v~~~~~~g~--- 247 (296)
T 3e5z_A 190 -----------TGDNATHRYCL--NARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--G---DGVHVLTPDGD--- 247 (296)
T ss_dssp -----------TTTTEEEEEEE--CSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--T---TEEEEECTTSC---
T ss_pred -----------CCCCeEEEEEE--CCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--C---CeEEEECCCCC---
Confidence 23457888886 112333 12221 223345789999997 44443 2 35899998752
Q ss_pred cEEEeccCCccccCCCCCCceEe-ccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceE
Q 002164 495 PRILFDRSSEDVYSDPGSPMMRR-TSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKE 565 (958)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~ 565 (958)
.......... +.. +.| +|||+.|+.... ..|+.+++++++.+
T Consensus 248 ~~~~~~~~~~-~~~------~~f~~~d~~~L~v~t~----------------------~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 248 ELGRVLTPQT-TSN------LCFGGPEGRTLYMTVS----------------------TEFWSIETNVRGLE 290 (296)
T ss_dssp EEEEEECSSC-CCE------EEEESTTSCEEEEEET----------------------TEEEEEECSCCBCC
T ss_pred EEEEEECCCC-cee------EEEECCCCCEEEEEcC----------------------CeEEEEEccccccc
Confidence 2222222211 221 667 689988877652 15889998877654
No 385
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.06 E-value=1e-08 Score=110.24 Aligned_cols=252 Identities=10% Similarity=0.050 Sum_probs=145.8
Q ss_pred CCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCcc
Q 002164 112 PALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKL 191 (958)
Q Consensus 112 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~ 191 (958)
..+.|+|||+.|+|+... . +.|+.++. +| ..+.+.. .....
T Consensus 48 egp~~~~~g~~l~~~d~~----------------------~----------~~i~~~~~--~g---~~~~~~~--~~~~~ 88 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLV----------------------G----------RRVLGWRE--DG---TVDVLLD--ATAFT 88 (305)
T ss_dssp EEEEEEGGGTEEEEEETT----------------------T----------TEEEEEET--TS---CEEEEEE--SCSCE
T ss_pred cCCeEeCCCCEEEEEECC----------------------C----------CEEEEEeC--CC---CEEEEeC--CCCcc
Confidence 368999999999888653 1 25777775 23 3334432 12356
Q ss_pred cceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCC
Q 002164 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (958)
Q Consensus 192 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~ 271 (958)
....|+|||+.++.. .+...|++++.+ |+.+.+...........+..+++.|||++. ++.+.- +..
T Consensus 89 ~gl~~d~dG~l~v~~---------~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~-~td~~~-g~~-- 154 (305)
T 3dr2_A 89 NGNAVDAQQRLVHCE---------HGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIW-FTDPPF-GLR-- 154 (305)
T ss_dssp EEEEECTTSCEEEEE---------TTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEE-EECCSG-GGS--
T ss_pred ceeeECCCCCEEEEE---------CCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEE-EeCcCC-Ccc--
Confidence 778999999854442 124579999987 565555432211101114578999999744 431000 000
Q ss_pred CCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEE
Q 002164 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILIS 349 (958)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~ 349 (958)
...++. ....+ .....||+++. +|+.+.+. . .....++|||||+.|++.
T Consensus 155 ----------~~~~~~----------~~~~~--------~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~ 205 (305)
T 3dr2_A 155 ----------KPSQGC----------PADPE--------LAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVS 205 (305)
T ss_dssp ----------CGGGSC----------CCCCS--------SSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEE
T ss_pred ----------cccccc----------ccccc--------cCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEE
Confidence 000000 00000 02356999998 78777665 4 445678999999999887
Q ss_pred eecCCccccccCCCCCceeEEEeccCceE---EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~l~d~~~~~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
..... ......|++++++++.. +.+.... ...+..+.+++||+ |++
T Consensus 206 ~~~~~-------~~~~~~i~~~~~~~~~l~~~~~~~~~~------------~~~pdgi~~d~~G~-lwv----------- 254 (305)
T 3dr2_A 206 QTPEQ-------GHGSVEITAFAWRDGALHDRRHFASVP------------DGLPDGFCVDRGGW-LWS----------- 254 (305)
T ss_dssp ECCC----------CCCEEEEEEEETTEEEEEEEEECCS------------SSCCCSEEECTTSC-EEE-----------
T ss_pred ecCCc-------CCCCCEEEEEEecCCCccCCeEEEECC------------CCCCCeEEECCCCC-EEE-----------
Confidence 63310 00124799999885432 1111110 12345788999998 443
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
...+.|++++. +|+....+.... ....++|+||++.|++++.. .||.+++
T Consensus 255 ---~~~~gv~~~~~---~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 255 ---SSGTGVCVFDS---DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp ---CCSSEEEEECT---TSCEEEEEECSS-CCCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred ---ecCCcEEEECC---CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 22345888884 555555554333 46788999999998887642 4777654
No 386
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.05 E-value=1.4e-09 Score=114.24 Aligned_cols=197 Identities=12% Similarity=0.091 Sum_probs=111.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (958)
.|.||++||++.... .|.. +.. ...+|.|+.++. +|++.+...........+|+.+.++.
T Consensus 21 ~~~lv~lhg~~~~~~-----------~~~~----~~~--l~~~~~v~~~d~---~G~~~~~~~~~~~~~~~~~~~~~i~~ 80 (265)
T 3ils_A 21 RKTLFMLPDGGGSAF-----------SYAS----LPR--LKSDTAVVGLNC---PYARDPENMNCTHGAMIESFCNEIRR 80 (265)
T ss_dssp SEEEEEECCTTCCGG-----------GGTT----SCC--CSSSEEEEEEEC---TTTTCGGGCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHH-----------HHHH----HHh--cCCCCEEEEEEC---CCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 678899999643211 1211 122 367899999554 45554443333455666666666554
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHH---hCCCceeEEEEeccCCCCCCCCC--------------Cc-------cc
Q 002164 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLA---HAPHLFCCGIARSGAYNRTLTPF--------------GF-------QN 805 (958)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~~~~~~~~~~~--------------~~-------~~ 805 (958)
+. ...++.++||||||.++..++. ..|++++++|..++......... +. ..
T Consensus 81 ~~-----~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
T 3ils_A 81 RQ-----PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGS 155 (265)
T ss_dssp HC-----SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSC
T ss_pred hC-----CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCC
Confidence 41 1248999999999999999998 67788999998876432111110 00 00
Q ss_pred ccchhh------hcHHHHHhcCcccccCCCCCCEE-EEeeCC---CCCCCC------------ChHHHHHHHHHHHhCCC
Q 002164 806 EDRTLW------EATSTYVEMSPFMSANKLKKPIL-LVHGEE---DNNSGT------------LTMQSDRFFNALKGHGA 863 (958)
Q Consensus 806 ~~~~~~------~~~~~~~~~sp~~~~~~~~~P~L-ii~G~~---D~~v~~------------~~~~~~~~~~~l~~~g~ 863 (958)
.....+ .+......+.+ ....++++|++ +++|++ |..++. .......+.+.+. +.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~~ 232 (265)
T 3ils_A 156 TEPPSYLIPHFTAVVDVMLDYKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP--GA 232 (265)
T ss_dssp SCCCTTHHHHHHHHHHHTTTCCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHST--TC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCC--cc
Confidence 000000 00111111111 12346789987 999999 987720 0222233322221 13
Q ss_pred cEEEEEeCCCCccCC-CcccHHHHHHHHHHHH
Q 002164 864 LCRLVILPFESHGYA-ARESIMHVLWETDRWL 894 (958)
Q Consensus 864 ~~~~~~~p~~~H~~~-~~~~~~~~~~~i~~fl 894 (958)
.++++++||+||.+. ..+....+.+.|.+||
T Consensus 233 ~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 233 SFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp CEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred ceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 689999999999864 1345555555565554
No 387
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.04 E-value=1.1e-08 Score=112.72 Aligned_cols=231 Identities=13% Similarity=0.016 Sum_probs=139.2
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
..+...+|||||+.|+... ...+.+|++++++......... +....|+++++.++++..
T Consensus 20 ~~V~~v~fs~dg~~la~g~----------~~~~~iw~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~----- 78 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILST----------LKSFEIYNVHPVAHIMSQEMRH------LSKVRMLHRTNYVAFVTG----- 78 (355)
T ss_dssp CCCCEEEECTTSSEEEEEC----------SSEEEEEEETTEEEEEEEECSC------CCEEEECTTSSEEEEECS-----
T ss_pred CceEEEEECCCCCEEEEEc----------CCEEEEEecCCcceeeeeecCC------eEEEEEcCCCCEEEEEEC-----
Confidence 4688999999999888743 1235677777665443222222 457889999988876610
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCCccccccccCCCCcEE
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPAVYTSLDPSPDEKYI 346 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~~~~~~~~~SpDGk~l 346 (958)
....|.++|+ +|+.. .+.....+..+.|++++ +
T Consensus 79 -------------------------------------------~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~ 113 (355)
T 3vu4_A 79 -------------------------------------------VKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--I 113 (355)
T ss_dssp -------------------------------------------STTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--E
T ss_pred -------------------------------------------CccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--E
Confidence 1235777887 66433 33333567788888875 4
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCc-e-EEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGI-F-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~-~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
++.. .+.+++||+.+. . ...+.. + .....+++ +.+++..
T Consensus 114 ~~~~--------------~~~i~i~d~~~~~~~~~~~~~-------~---------~~~~~~s~--~~la~~s------- 154 (355)
T 3vu4_A 114 VVSY--------------GDVISVFKFGNPWKRITDDIR-------F---------GGVCEFSN--GLLVYSN------- 154 (355)
T ss_dssp EEEE--------------TTEEEEEESSTTCCBSSCCEE-------E---------EEEEEEET--TEEEEEE-------
T ss_pred EEEE--------------cCEEEEEECCCCceeeEEecc-------C---------CceEEEEc--cEEEEeC-------
Confidence 4333 238999999864 2 111111 0 12345566 4444410
Q ss_pred cccccccCCeEEEEeCCCCCCCC-----------------ceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEc
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEG-----------------PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~-----------------~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~ 487 (958)
....+.|.+|++ ..+. ...+..+...+..++|+|||+.|+..+.++. .+.++|
T Consensus 155 ----g~~~g~v~iwd~---~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~---~v~iwd 224 (355)
T 3vu4_A 155 ----EFNLGQIHITKL---QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT---IIRVFK 224 (355)
T ss_dssp ----SSCTTCEEEEEC---CC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS---EEEEEE
T ss_pred ----CCcCcEEEEEEC---CCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC---EEEEEE
Confidence 023457888886 3322 4555666777889999999999887754431 145556
Q ss_pred CCCCCCCcEEEec-c-CCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCc
Q 002164 488 PGSKDVAPRILFD-R-SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGS 563 (958)
Q Consensus 488 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~ 563 (958)
+.++ +....+. . ....+.. ++|+|||++|+....+ ..|.+||+..+.
T Consensus 225 ~~~~--~~~~~~~~g~h~~~v~~------~~~s~~~~~l~s~s~d---------------------~~v~iw~~~~~~ 273 (355)
T 3vu4_A 225 TEDG--VLVREFRRGLDRADVVD------MKWSTDGSKLAVVSDK---------------------WTLHVFEIFNDQ 273 (355)
T ss_dssp TTTC--CEEEEEECTTCCSCEEE------EEECTTSCEEEEEETT---------------------CEEEEEESSCCS
T ss_pred CCCC--cEEEEEEcCCCCCcEEE------EEECCCCCEEEEEECC---------------------CEEEEEEccCCC
Confidence 6553 3333333 2 3344444 8899999998887621 258899987653
No 388
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.03 E-value=1.8e-08 Score=109.72 Aligned_cols=206 Identities=10% Similarity=0.049 Sum_probs=120.3
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCc----ee-eccCCCCccccccccceEEec--CCeEEEEE
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGK----AR-PLFQSPDIYLNAIFDNFVWVN--NSTLLVCT 261 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~----~~-~lt~~~~~~~~~~~~~~~wsp--DG~~l~~~ 261 (958)
..+....|+|||++|+.... ...|.+|++.++. .. .+..... .+..++|+| |++.|+..
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSS---------DQHIKVFKLDKDTSNWELSDSWRAHDS-----SIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp SCEEEEEECSSSSEEEEEET---------TSEEEEEEECSSSCCEEEEEEEECCSS-----CEEEEEECCGGGCSEEEEE
T ss_pred cceeEEEEcCCCCEEEEeeC---------CCeEEEEECCCCCCcceecceeccCCC-----cEEEEEEcCCCCCCEEEEE
Confidence 46899999999999988652 4577888877653 11 1222222 277899998 68888876
Q ss_pred ecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe----------eeecCC
Q 002164 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT----------VKEIGP 330 (958)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~----------~~~l~~ 330 (958)
. ....|.++++ +++ ...+..
T Consensus 78 ~-------------------------------------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 108 (351)
T 3f3f_A 78 S-------------------------------------------------YDKTVKLWEEDPDQEECSGRRWNKLCTLND 108 (351)
T ss_dssp E-------------------------------------------------TTSCEEEEEECTTSCTTSSCSEEEEEEECC
T ss_pred c-------------------------------------------------CCCeEEEEecCCCcccccccCcceeeeecc
Confidence 2 1233556665 431 333433
Q ss_pred C-ccccccccCCC--CcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeee
Q 002164 331 P-AVYTSLDPSPD--EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINW 406 (958)
Q Consensus 331 ~-~~~~~~~~SpD--Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~ 406 (958)
. ..+..++|+|+ |+.|+..+.+ +.+.+||+..+.. +.+...................+..+.|
T Consensus 109 ~~~~v~~~~~~~~~~~~~l~~~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 109 SKGSLYSVKFAPAHLGLKLACLGND-------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETT-------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cCCceeEEEEcCCCCCcEEEEecCC-------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 3 67889999999 9999887733 4899999875431 1111000000000011122245678999
Q ss_pred ecC---CCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEE---EeeccccCceeeecCC----ceEEEEEec
Q 002164 407 RSD---KPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEIL---HKLDLRYGGISWCDDS----LALVYESWY 476 (958)
Q Consensus 407 spD---G~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l---~~~~~~~~~~~~spDg----~~l~~~~~~ 476 (958)
+|+ ++.++.. +..+.+..++. ..+....+ ..+...+..+.|+|+| +.|+....+
T Consensus 176 ~p~~~~~~~l~~~-------------~~~~~~~~~~~---~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 176 CPSRFSPEKLAVS-------------ALEQAIIYQRG---KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CCCSSSCCEEEEE-------------ETTEEEEEEEC---TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred ccCCCCCcEEEEe-------------cCCCcEEEEcc---CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 998 6666552 22334444442 33443323 3345567789999998 556555433
Q ss_pred cccceEEEEEcC
Q 002164 477 KTRRTRTWVISP 488 (958)
Q Consensus 477 ~~~~~~l~~~~~ 488 (958)
+. .++|.+..
T Consensus 240 g~--i~iwd~~~ 249 (351)
T 3f3f_A 240 GR--IRIFKITE 249 (351)
T ss_dssp SC--EEEEEEEE
T ss_pred Ce--EEEEeCCC
Confidence 32 66776653
No 389
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=2.3e-08 Score=106.98 Aligned_cols=233 Identities=9% Similarity=0.022 Sum_probs=136.4
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (958)
...|.|+|+++.|+|+.. ....|++++.++++.+.+.. +.. +..++++|||++++..
T Consensus 15 ~Egp~w~~~~~~l~~~d~--------~~~~i~~~d~~~~~~~~~~~-~~~-----~~~i~~~~dG~l~v~~--------- 71 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDI--------PAKKVCRWDSFTKQVQRVTM-DAP-----VSSVALRQSGGYVATI--------- 71 (297)
T ss_dssp EEEEEEETTTTEEEEEET--------TTTEEEEEETTTCCEEEEEC-SSC-----EEEEEEBTTSSEEEEE---------
T ss_pred ccCCeEECCCCEEEEEEC--------CCCEEEEEECCCCcEEEEeC-CCc-----eEEEEECCCCCEEEEE---------
Confidence 456999999999998642 35689999999887654432 221 6688999999944432
Q ss_pred CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC------ccccccccCCCC
Q 002164 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------AVYTSLDPSPDE 343 (958)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~------~~~~~~~~SpDG 343 (958)
...|++++. +|+.+.+... .....+.++|||
T Consensus 72 ------------------------------------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG 109 (297)
T 3g4e_A 72 ------------------------------------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG 109 (297)
T ss_dssp ------------------------------------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS
T ss_pred ------------------------------------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC
Confidence 134888888 7766554321 235678899999
Q ss_pred cEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCC
Q 002164 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (958)
Q Consensus 344 k~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~ 423 (958)
+ |++.......... ......+.++.++.++......... .....++|+|||+.+++. +
T Consensus 110 ~-l~~~~~~~~~~~~-~~~~~~~~l~~~d~~g~~~~~~~~~--------------~~pngi~~spdg~~lyv~-~----- 167 (297)
T 3g4e_A 110 R-YFAGTMAEETAPA-VLERHQGALYSLFPDHHVKKYFDQV--------------DISNGLDWSLDHKIFYYI-D----- 167 (297)
T ss_dssp C-EEEEEEECCSBTT-BCCTTCEEEEEECTTSCEEEEEEEE--------------SBEEEEEECTTSCEEEEE-E-----
T ss_pred C-EEEecCCcccccc-cccCCCcEEEEEECCCCEEEEeecc--------------ccccceEEcCCCCEEEEe-c-----
Confidence 9 4554422110000 0001224677776654432222111 123578999999988763 1
Q ss_pred CcccccccCCeEEEEeCCCCCCCCc---eEEEe---eccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002164 424 DAKVEVTPRDIIYTQQAEPVQGEGP---EILHK---LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (958)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g~~~---~~l~~---~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 497 (958)
...+.|++++.++ .++.. +.+.. .......++++++|+ |+.+.+.+ ..|++++++++ +...
T Consensus 168 ------~~~~~i~~~~~d~-~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~---~~v~~~d~~tG--~~~~ 234 (297)
T 3g4e_A 168 ------SLSYSVDAFDYDL-QTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNG---GRVIRLDPVTG--KRLQ 234 (297)
T ss_dssp ------GGGTEEEEEEECT-TTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETT---TEEEEECTTTC--CEEE
T ss_pred ------CCCCcEEEEeccC-CCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCC---CEEEEEcCCCc--eEEE
Confidence 2345788887522 22332 12221 123345688999995 55554433 36999999864 2222
Q ss_pred EeccCCccccCCCCCCceEec-cCCceEEEEee
Q 002164 498 LFDRSSEDVYSDPGSPMMRRT-STGTYVIAKIK 529 (958)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~s-pdG~~l~~~~~ 529 (958)
....+...+.. +.|+ ||+++|+....
T Consensus 235 ~i~~p~~~~t~------~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 235 TVKLPVDKTTS------CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEECSSSBEEE------EEEESGGGCEEEEEEB
T ss_pred EEECCCCCceE------EEEeCCCCCEEEEEcC
Confidence 22222222222 6787 88888877763
No 390
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=3e-08 Score=106.08 Aligned_cols=239 Identities=13% Similarity=0.027 Sum_probs=142.5
Q ss_pred CceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCccc
Q 002164 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLN 192 (958)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~ 192 (958)
.+.|+|+++.|.++... . ..|+.++..+ +..+.+. . ...+.
T Consensus 17 gp~w~~~~~~l~~~d~~----------------------~----------~~i~~~d~~~----~~~~~~~-~--~~~~~ 57 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIP----------------------A----------KKVCRWDSFT----KQVQRVT-M--DAPVS 57 (297)
T ss_dssp EEEEETTTTEEEEEETT----------------------T----------TEEEEEETTT----CCEEEEE-C--SSCEE
T ss_pred CCeEECCCCEEEEEECC----------------------C----------CEEEEEECCC----CcEEEEe-C--CCceE
Confidence 68899998888887642 1 2678888743 3333332 2 23577
Q ss_pred ceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCC
Q 002164 193 FVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKK 272 (958)
Q Consensus 193 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~ 272 (958)
.++++|||+ |+... ...|++++.++++.+.+...........+..++++|||++.+.........
T Consensus 58 ~i~~~~dG~-l~v~~----------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~---- 122 (297)
T 3g4e_A 58 SVALRQSGG-YVATI----------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP---- 122 (297)
T ss_dssp EEEEBTTSS-EEEEE----------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT----
T ss_pred EEEECCCCC-EEEEE----------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccc----
Confidence 889999999 43332 347999999988877665432211111255788999998444331110000
Q ss_pred CCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCCC-ccccccccCCCCcEEEEEee
Q 002164 273 PLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISSI 351 (958)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~ 351 (958)
. ... .....||+++.+|+...+... .....++|||||+.|++...
T Consensus 123 ------------------~--------~~~--------~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 123 ------------------A--------VLE--------RHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp ------------------T--------BCC--------TTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred ------------------c--------ccc--------CCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecC
Confidence 0 000 023568888876655554443 44567899999999988764
Q ss_pred cCCccccccCCCCCceeEEEecc--CceE---EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 352 HRPYSFIVPCGRFPRQVGVWTTD--GIFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~l~d~~--~~~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
. .+.|++++++ ++.. +.+...+.. ...+..+.+++||+ |++. .
T Consensus 169 ~------------~~~i~~~~~d~~~G~~~~~~~~~~~~~~----------~~~p~g~~~d~~G~-lwva-~-------- 216 (297)
T 3g4e_A 169 L------------SYSVDAFDYDLQTGQISNRRSVYKLEKE----------EQIPDGMCIDAEGK-LWVA-C-------- 216 (297)
T ss_dssp G------------GTEEEEEEECTTTCCEEEEEEEEECCGG----------GCEEEEEEEBTTSC-EEEE-E--------
T ss_pred C------------CCcEEEEeccCCCCcccCcEEEEECCCC----------CCCCCeeEECCCCC-EEEE-E--------
Confidence 3 2378899874 3322 222222111 12346788999995 4432 1
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEeeccccCceeee-cCCceEEEEEec
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWC-DDSLALVYESWY 476 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~s-pDg~~l~~~~~~ 476 (958)
...+.|++++. .+|.....+......+..++|+ ||++.|+.++..
T Consensus 217 ---~~~~~v~~~d~--~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 217 ---YNGGRVIRLDP--VTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp ---ETTTEEEEECT--TTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred ---cCCCEEEEEcC--CCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 12346888884 2244344444333456778998 899988887653
No 391
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.02 E-value=8.8e-09 Score=115.13 Aligned_cols=273 Identities=8% Similarity=-0.077 Sum_probs=130.6
Q ss_pred CceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCC-CCCcc
Q 002164 113 ALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP-DGAKL 191 (958)
Q Consensus 113 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~-~~~~~ 191 (958)
...++|+++.||..+.+ ..|.||++.. ++......+..+. +...+
T Consensus 94 ~~~~~~~~~~las~~~d---------------------------------~~v~lw~~~~-~~~~~~~~~~~~~gH~~~v 139 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQD---------------------------------NTVRLIITKN-ETIITQHVLGGKSGHHNFV 139 (393)
T ss_dssp ---CCEEEEEEEEEETT---------------------------------SCEEEEEEET-TEEEEEEEECTTTSCSSCE
T ss_pred eeecCCCCCEEEEEeCC---------------------------------CcEEEEECCC-CccceeeeecccCCCCCce
Confidence 44567888888877765 4789999854 1111112222122 23479
Q ss_pred cceeecC--------CCCeEEEEEeeccccCCCCCceEEEEEcCCCcee-eccCCCCccccccccceEEecCCeE-EEEE
Q 002164 192 NFVTWSQ--------DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKAR-PLFQSPDIYLNAIFDNFVWVNNSTL-LVCT 261 (958)
Q Consensus 192 ~~~~wSP--------DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~-~lt~~~~~~~~~~~~~~~wspDG~~-l~~~ 261 (958)
..+.|+| ||+.||-... ...|.+||+.++... .+...... +..++|+|++.. |+..
T Consensus 140 ~~v~~~p~~~~~~~~d~~~las~s~---------D~tv~~Wd~~~~~~~~~~~~~~~~-----v~~v~~~p~~~~~l~~~ 205 (393)
T 4gq1_A 140 NDIDIADVYSADNRLAEQVIASVGD---------DCTLIIWRLTDEGPILAGYPLSSP-----GISVQFRPSNPNQLIVG 205 (393)
T ss_dssp EEEEEEEEECTTCSEEEEEEEEEET---------TSEEEEEEEETTEEEEEEEECSSC-----EEEEEEETTEEEEEEEE
T ss_pred EEEEEccccccccCCCCCEEEEEEC---------CCeEEEEECCCCceeeeecCCCCC-----cEEEEECCCCCceEEec
Confidence 9999998 9999988653 567888887665443 33333332 668999999864 5544
Q ss_pred ecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCC--eeeecCCC-ccccccc
Q 002164 262 IPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG--TVKEIGPP-AVYTSLD 338 (958)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~~l~~~-~~~~~~~ 338 (958)
..+... .+++...+....... ... . .....++..+... ........ ..+..+.
T Consensus 206 ~~d~~v------------~~wd~~t~~~~~~~~-----~~~-~------~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 206 ERNGNI------------RIFDWTLNLSAEENS-----QTE-L------VKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp ETTSEE------------EEEETTCCC----------------------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred CCCCEE------------EEEECCCCccccccc-----ccC-C------cccceEEecccccceeeeecccccccceeee
Confidence 221110 011111000000000 000 0 0000011111100 00011111 3455666
Q ss_pred cC-CCCcEEEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccc----cCccc-ccccccCcceeeeecCCC
Q 002164 339 PS-PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAE----DIPIA-FNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 339 ~S-pDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~----~~p~~-~~~~~~~~~~~~~spDG~ 411 (958)
|+ |||+.|+..+. ++.+.+||+..+. ...+....... ..|.. ............|+|...
T Consensus 262 ~~~~dg~~l~s~s~-------------d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (393)
T 4gq1_A 262 WIGSDGSGILAMCK-------------SGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYM 328 (393)
T ss_dssp EETTTTCEEEEECT-------------TSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCT
T ss_pred eecCCCCEEEEEeC-------------CCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCC
Confidence 65 89999987763 3489999987443 22222211110 00100 000001112233444332
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEE
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (958)
.+++.+ .+..+.|++|+. ..+.....+......+..++|||||+.|+..++.+ ..||++
T Consensus 329 ~~~~~s-----------gs~Dg~V~lwd~--~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G---v~lvrL 387 (393)
T 4gq1_A 329 DYFATA-----------HSQHGLIQLINT--YEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS---VLLTRL 387 (393)
T ss_dssp TEEEEE-----------ETTTTEEEEEET--TCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE---EEEEEE
T ss_pred CEEEEE-----------ECCCCEEEEEEC--CCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC---eEEEEE
Confidence 222211 134668999996 34555555666677889999999999999886433 445544
No 392
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.00 E-value=5.2e-09 Score=116.50 Aligned_cols=212 Identities=12% Similarity=0.026 Sum_probs=125.8
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH------CCcEEEEcCCC
Q 002164 648 DGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA------RGFAILGGPTT 721 (958)
Q Consensus 648 dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~------~G~~vl~~~~~ 721 (958)
+|..|+...+.+.. ...|.||++||++.... .| ......|++ .||.|++ .
T Consensus 93 ~g~~i~~~~~~~~~------~~~~pllllHG~~~s~~-----------~~----~~~~~~L~~~~~~~~~gf~vv~---~ 148 (408)
T 3g02_A 93 EGLTIHFAALFSER------EDAVPIALLHGWPGSFV-----------EF----YPILQLFREEYTPETLPFHLVV---P 148 (408)
T ss_dssp TTEEEEEEEECCSC------TTCEEEEEECCSSCCGG-----------GG----HHHHHHHHHHCCTTTCCEEEEE---E
T ss_pred CCEEEEEEEecCCC------CCCCeEEEECCCCCcHH-----------HH----HHHHHHHhcccccccCceEEEE---E
Confidence 89999988876532 12567889999753211 11 133446666 5999999 6
Q ss_pred CCCCCCCcccch----hhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCC
Q 002164 722 PIIGEGDEEAND----RFVEQLVACAEAAVEEVVRRGVAHPS-KIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNR 796 (958)
Q Consensus 722 ~~~G~G~~~~~~----~~~~~~~~D~~~av~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~ 796 (958)
+.+|+|.+.... .......+|+.+.++. .+ .+ ++.++|||+||.+++.+|.++|+++..++..+++...
T Consensus 149 DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~---lg---~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~ 222 (408)
T 3g02_A 149 SLPGYTFSSGPPLDKDFGLMDNARVVDQLMKD---LG---FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAP 222 (408)
T ss_dssp CCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHH---TT---CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC---CCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCC
Confidence 667888775532 1234444444444433 22 23 8999999999999999999997766555555443321
Q ss_pred CCCCC--Ccccc---------------cc----------h---------------------hhhc-----H---------
Q 002164 797 TLTPF--GFQNE---------------DR----------T---------------------LWEA-----T--------- 814 (958)
Q Consensus 797 ~~~~~--~~~~~---------------~~----------~---------------------~~~~-----~--------- 814 (958)
..... .+... .. + .|.+ .
T Consensus 223 ~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y 302 (408)
T 3g02_A 223 PEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLY 302 (408)
T ss_dssp TTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHH
T ss_pred cccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHH
Confidence 10000 00000 00 0 0000 0
Q ss_pred ----------HHHHhcC-c-cc--------ccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 002164 815 ----------STYVEMS-P-FM--------SANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFES 874 (958)
Q Consensus 815 ----------~~~~~~s-p-~~--------~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~ 874 (958)
..|.+.. . .. .+.++++|+++++|.+|...+ +.. +.+.. ...+.+..++++|
T Consensus 303 ~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~--p~~---~~~~~---~~~~~~~~~~~gG 374 (408)
T 3g02_A 303 WLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPV--PRS---WIATT---GNLVFFRDHAEGG 374 (408)
T ss_dssp HHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCC--CHH---HHGGG---EEEEEEEECSSCB
T ss_pred HhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccC--cHH---HHHhc---CCeeEEEECCCCc
Confidence 0000000 0 00 235578999999999997655 432 22222 2237788999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHhh
Q 002164 875 HGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 875 H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
|.. ..+..+.+.+.|.+||.+.-
T Consensus 375 Hf~-~lE~Pe~~~~~l~~fl~~~~ 397 (408)
T 3g02_A 375 HFA-ALERPRELKTDLTAFVEQVW 397 (408)
T ss_dssp SCH-HHHCHHHHHHHHHHHHHHHC
T ss_pred Cch-hhhCHHHHHHHHHHHHHHHH
Confidence 986 36778889999999998764
No 393
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.00 E-value=4.3e-08 Score=107.23 Aligned_cols=187 Identities=6% Similarity=-0.019 Sum_probs=117.8
Q ss_pred CcccceeecC--CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCC
Q 002164 189 AKLNFVTWSQ--DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLR 266 (958)
Q Consensus 189 ~~~~~~~wSP--DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~ 266 (958)
..+....|+| +|+.|+.... ...|.+||+.+++...+...... ..+..++|+|||++|+...
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~---------dg~i~~wd~~~~~~~~~~~~~~~---~~i~~~~~~pdg~~lasg~---- 189 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADN---------RGTIGFQSYEDDSQYIVHSAKSD---VEYSSGVLHKDSLLLALYS---- 189 (343)
T ss_dssp SCEEEEECCC---CCEEEEEET---------TCCEEEEESSSSCEEEEECCCSS---CCCCEEEECTTSCEEEEEC----
T ss_pred CCEEEEEcCCCCCCCEEEEEeC---------CCcEEEEECCCCcEEEEEecCCC---CceEEEEECCCCCEEEEEc----
Confidence 4688899999 9999887652 56889999998887654422221 1167899999999998761
Q ss_pred CCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee--eecCC-C-ccccccccCC
Q 002164 267 GDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV--KEIGP-P-AVYTSLDPSP 341 (958)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~--~~l~~-~-~~~~~~~~Sp 341 (958)
..+.|.++|+ +++. ..+.. . ..+..++|||
T Consensus 190 ---------------------------------------------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 190 ---------------------------------------------PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp ---------------------------------------------TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT
T ss_pred ---------------------------------------------CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC
Confidence 2345778888 6643 35555 3 7788999999
Q ss_pred CCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEec
Q 002164 342 DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ 420 (958)
Q Consensus 342 DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~ 420 (958)
||++|+..+.+ .|.+||+..... ..+....... .+ .....+.|+|||+.|+..
T Consensus 225 ~g~~l~s~~~~--------------~v~iwd~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~g~~l~~~---- 278 (343)
T 3lrv_A 225 NGYWMVVECDQ--------------TVVCFDLRKDVGTLAYPTYTIPE-FK-------TGTVTYDIDDSGKNMIAY---- 278 (343)
T ss_dssp TSSEEEEEESS--------------BEEEEETTSSTTCBSSCCCBC-------------CCEEEEECTTSSEEEEE----
T ss_pred CCCEEEEEeCC--------------eEEEEEcCCCCcceeeccccccc-cc-------ccceEEEECCCCCEEEEe----
Confidence 99999988722 799999985432 2222111000 00 011359999999988763
Q ss_pred cCCCccccccc-CCeEEEEeCCCCCCCCceEEEeeccccCceeeec---CCceEEEEEecc
Q 002164 421 DGGDAKVEVTP-RDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCD---DSLALVYESWYK 477 (958)
Q Consensus 421 ~~~~~~~~~~~-~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~sp---Dg~~l~~~~~~~ 477 (958)
+. .+.+.+|+. ..+.+.... ..+..+.|++ +++.|++....+
T Consensus 279 ---------s~~d~~i~v~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~ 324 (343)
T 3lrv_A 279 ---------SNESNSLTIYKF--DKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDG 324 (343)
T ss_dssp ---------ETTTTEEEEEEE--CTTTCSEEE----EEEEECCC----CCCCEEEEEEETT
T ss_pred ---------cCCCCcEEEEEE--cccccceEe----cCceeEecCccccccceeEEEecCC
Confidence 22 456777764 122222222 2234567777 788887776544
No 394
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.98 E-value=1.4e-09 Score=116.79 Aligned_cols=210 Identities=13% Similarity=-0.056 Sum_probs=119.6
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCC
Q 002164 649 GVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGD 728 (958)
Q Consensus 649 g~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~ 728 (958)
+..+...++.|+++..+. .+.||++||...... . .+.......|+++||.|+.++ .+|+|.
T Consensus 13 ~~~l~~~i~~p~~~~~~~---~~~VvllHG~~~~~~-----------~--~~~~~l~~~L~~~G~~v~~~d---~~g~g~ 73 (317)
T 1tca_A 13 KSVLDAGLTCQGASPSSV---SKPILLVPGTGTTGP-----------Q--SFDSNWIPLSTQLGYTPCWIS---PPPFML 73 (317)
T ss_dssp HHHHHHTEEETTBCTTSC---SSEEEEECCTTCCHH-----------H--HHTTTHHHHHHTTTCEEEEEC---CTTTTC
T ss_pred HHHHhheeeCCCCCCCCC---CCeEEEECCCCCCcc-----------h--hhHHHHHHHHHhCCCEEEEEC---CCCCCC
Confidence 344556678887764322 456888999632110 0 011134567788999999954 456654
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEeccCCCCCCCC-----
Q 002164 729 EEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGAYNRTLTP----- 800 (958)
Q Consensus 729 ~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~~~~~~~~----- 800 (958)
+. ......++.+.++++.++. ..+++.++||||||.++.+++.+.| ++++++|++++........
T Consensus 74 ~~-----~~~~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~ 146 (317)
T 1tca_A 74 ND-----TQVNTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDA 146 (317)
T ss_dssp SC-----HHHHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHH
T ss_pred Cc-----HHHHHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhh
Confidence 32 2334567778888887753 2368999999999999999988765 7899999999865422100
Q ss_pred CCcccc--cch-hhhc-HHHHHhcCcccccCCCCCCEEEEeeCCCCCCCCChHH--HHHHHHHHHhCCCcEEEEEe----
Q 002164 801 FGFQNE--DRT-LWEA-TSTYVEMSPFMSANKLKKPILLVHGEEDNNSGTLTMQ--SDRFFNALKGHGALCRLVIL---- 870 (958)
Q Consensus 801 ~~~~~~--~~~-~~~~-~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~~~~~--~~~~~~~l~~~g~~~~~~~~---- 870 (958)
+..... ... .... ...+.... ....++|+++++|+.|..|+ +.. +.+....+.. . +.+..
T Consensus 147 ~~~~~~~~~~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~--p~~~~g~~~~~~l~~--a--~~~~~~~~~ 216 (317)
T 1tca_A 147 LAVSAPSVWQQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQ--PQVSNSPLDSSYLFN--G--KNVQAQAVC 216 (317)
T ss_dssp TTCBCHHHHHTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSC--CCCSSSTTSTTCCBT--S--EEEEHHHHH
T ss_pred hhhcCchHHhhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeEC--CccccccchhhhccC--C--ccEEeeecc
Confidence 000000 000 0000 01111100 01246899999999999997 554 2111111211 1 22222
Q ss_pred ---CCCCccCCCcccHHHHHHHHHHHHHH
Q 002164 871 ---PFESHGYAARESIMHVLWETDRWLQK 896 (958)
Q Consensus 871 ---p~~~H~~~~~~~~~~~~~~i~~fl~~ 896 (958)
++.+|... ..+ ..++..+.+||+.
T Consensus 217 ~~~~~~gH~~~-l~~-p~~~~~v~~~L~~ 243 (317)
T 1tca_A 217 GPLFVIDHAGS-LTS-QFSYVVGRSALRS 243 (317)
T ss_dssp CTTCCCCTTHH-HHB-HHHHHHHHHHHHC
T ss_pred CCCCccCcccc-cCC-HHHHHHHHHHhcC
Confidence 57899752 222 2346677888765
No 395
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=98.98 E-value=7.8e-10 Score=127.90 Aligned_cols=132 Identities=18% Similarity=0.172 Sum_probs=91.5
Q ss_pred eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-HCCcEEEEcCCC-CC
Q 002164 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTT-PI 723 (958)
Q Consensus 646 ~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~vl~~~~~-~~ 723 (958)
+.|... ..+|.|.+.... .++|+||++|||++..+.. ..+. . . .|+ .+|++|+.++|+ +.
T Consensus 95 ~edcl~--lnv~~P~~~~~~--~~~Pv~v~iHGG~~~~g~~--------~~~~---~--~-~la~~~g~vvv~~nYRlg~ 156 (542)
T 2h7c_A 95 SEDCLY--LNIYTPADLTKK--NRLPVMVWIHGGGLMVGAA--------STYD---G--L-ALAAHENVVVVTIQYRLGI 156 (542)
T ss_dssp ESCCCE--EEEEECSCTTSC--CCEEEEEEECCSTTTSCCS--------TTSC---C--H-HHHHHHTCEEEEECCCCHH
T ss_pred CCCCcE--EEEEECCCCCCC--CCCCEEEEECCCcccCCCc--------cccC---H--H-HHHhcCCEEEEecCCCCcc
Confidence 346544 468899865332 3499999999997654332 1121 1 1 345 489999998887 32
Q ss_pred CCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEeccCCC
Q 002164 724 IGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAYN 795 (958)
Q Consensus 724 ~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~~ 795 (958)
.|++............+.|+.++++|+.++ ...|+++|.|+|+|+||.++..++.. .+.+|+++|+.+|...
T Consensus 157 ~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 157 WGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred ccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 343322111112234578999999999886 24799999999999999999998886 3578999999998754
No 396
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.93 E-value=8.6e-08 Score=103.93 Aligned_cols=226 Identities=9% Similarity=0.018 Sum_probs=133.9
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (958)
...|.|+||++.|+++.. ....|++++.++++.+.+.. +.. +..++|+|||++++..
T Consensus 51 ~egp~~~~~~~~l~~~d~--------~~~~i~~~d~~~~~~~~~~~-~~~-----v~~i~~~~dg~l~v~~--------- 107 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNI--------LERELHELHLASGRKTVHAL-PFM-----GSALAKISDSKQLIAS--------- 107 (326)
T ss_dssp EEEEEEETTTTEEEEEEG--------GGTEEEEEETTTTEEEEEEC-SSC-----EEEEEEEETTEEEEEE---------
T ss_pred CcCCeEeCCCCEEEEEEC--------CCCEEEEEECCCCcEEEEEC-CCc-----ceEEEEeCCCeEEEEE---------
Confidence 356899999999988742 24589999999887765532 221 6688999999877644
Q ss_pred CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC------ccccccccCCCC
Q 002164 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP------AVYTSLDPSPDE 343 (958)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~------~~~~~~~~SpDG 343 (958)
...|++++. +|+.+.+... ..+..+.++|||
T Consensus 108 ------------------------------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G 145 (326)
T 2ghs_A 108 ------------------------------------------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG 145 (326)
T ss_dssp ------------------------------------------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS
T ss_pred ------------------------------------------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC
Confidence 123888898 7776655331 245678899999
Q ss_pred cEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCC
Q 002164 344 KYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGG 423 (958)
Q Consensus 344 k~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~ 423 (958)
+. ++...... .....+.|+.++ + +..+.+.... .....+.|+|||+.+++. +
T Consensus 146 ~l-~v~~~~~~------~~~~~~~l~~~~-~-g~~~~~~~~~-------------~~~~~i~~s~dg~~lyv~-~----- 197 (326)
T 2ghs_A 146 AL-WIGTMGRK------AETGAGSIYHVA-K-GKVTKLFADI-------------SIPNSICFSPDGTTGYFV-D----- 197 (326)
T ss_dssp CE-EEEEEETT------CCTTCEEEEEEE-T-TEEEEEEEEE-------------SSEEEEEECTTSCEEEEE-E-----
T ss_pred CE-EEEeCCCc------CCCCceEEEEEe-C-CcEEEeeCCC-------------cccCCeEEcCCCCEEEEE-E-----
Confidence 84 44432210 001134677777 4 4444432210 123578999999988774 1
Q ss_pred CcccccccCCeEEEEeCCCCCC-C--CceEEEee---ccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEE
Q 002164 424 DAKVEVTPRDIIYTQQAEPVQG-E--GPEILHKL---DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRI 497 (958)
Q Consensus 424 ~~~~~~~~~~~l~~~~~~~~~g-~--~~~~l~~~---~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 497 (958)
...+.|++++.++.+| . ..+.+... ......+.++++|+ |+++...+ ..|+++++++ +...
T Consensus 198 ------~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~---~~v~~~d~~g---~~~~ 264 (326)
T 2ghs_A 198 ------TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGE---GAVDRYDTDG---NHIA 264 (326)
T ss_dssp ------TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETT---TEEEEECTTC---CEEE
T ss_pred ------CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCC---CEEEEECCCC---CEEE
Confidence 2245788988521122 1 11223221 23345678889986 44443322 3589998854 2222
Q ss_pred EeccCCccccCCCCCCceEec-cCCceEEEEe
Q 002164 498 LFDRSSEDVYSDPGSPMMRRT-STGTYVIAKI 528 (958)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~s-pdG~~l~~~~ 528 (958)
........+.+ ++|+ +|++.|+...
T Consensus 265 ~i~~~~~~~~~------~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 265 RYEVPGKQTTC------PAFIGPDASRLLVTS 290 (326)
T ss_dssp EEECSCSBEEE------EEEESTTSCEEEEEE
T ss_pred EEECCCCCcEE------EEEecCCCCEEEEEe
Confidence 22222222222 6787 8888777665
No 397
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=98.91 E-value=2.1e-09 Score=122.86 Aligned_cols=132 Identities=20% Similarity=0.204 Sum_probs=91.4
Q ss_pred eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCC-cEEEEcCCCCC-
Q 002164 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARG-FAILGGPTTPI- 723 (958)
Q Consensus 646 ~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G-~~vl~~~~~~~- 723 (958)
+.|... ..+|.|.. . ..++|+||++|||++..+...... + ....|+++| ++|+.++|+-.
T Consensus 81 ~edcl~--l~v~~P~~--~--~~~~Pviv~iHGGg~~~g~~~~~~------~------~~~~la~~~~~vvv~~nYRlg~ 142 (498)
T 2ogt_A 81 SEDGLY--LNIWSPAA--D--GKKRPVLFWIHGGAFLFGSGSSPW------Y------DGTAFAKHGDVVVVTINYRMNV 142 (498)
T ss_dssp BSCCCE--EEEEESCS--S--SCCEEEEEEECCSTTTSCCTTCGG------G------CCHHHHHHHTCEEEEECCCCHH
T ss_pred CCCCcE--EEEEecCC--C--CCCCcEEEEEcCCccCCCCCCCCc------C------CHHHHHhCCCEEEEeCCCcCch
Confidence 345544 46778863 2 234899999999976543321110 1 134677776 99999888721
Q ss_pred CCCCCccc-----chhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEeccC
Q 002164 724 IGEGDEEA-----NDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGA 793 (958)
Q Consensus 724 ~G~G~~~~-----~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~ 793 (958)
.|++.... ....+...+.|+.+|++|++++- ..|+++|.|+|+|+||.+++.++... ..+|+++|+.+|.
T Consensus 143 ~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 222 (498)
T 2ogt_A 143 FGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGS 222 (498)
T ss_dssp HHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCC
T ss_pred hhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCC
Confidence 24433221 12234567899999999999862 36999999999999999999888753 4689999999997
Q ss_pred CC
Q 002164 794 YN 795 (958)
Q Consensus 794 ~~ 795 (958)
..
T Consensus 223 ~~ 224 (498)
T 2ogt_A 223 GS 224 (498)
T ss_dssp TT
T ss_pred cc
Confidence 65
No 398
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.89 E-value=1.4e-09 Score=125.80 Aligned_cols=132 Identities=20% Similarity=0.210 Sum_probs=90.2
Q ss_pred eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCC-C
Q 002164 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTP-I 723 (958)
Q Consensus 646 ~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~-~ 723 (958)
+.|...+ .+|.|... + +.++|+||++|||++..+..... .+ ....|++ +|++|+.++|+- .
T Consensus 93 ~edcl~l--~v~~P~~~-~--~~~~Pviv~iHGGg~~~g~~~~~------~~------~~~~la~~~g~vvv~~nYRlg~ 155 (543)
T 2ha2_A 93 SEDCLYL--NVWTPYPR-P--ASPTPVLIWIYGGGFYSGAASLD------VY------DGRFLAQVEGAVLVSMNYRVGT 155 (543)
T ss_dssp ESCCCEE--EEEEESSC-C--SSCEEEEEEECCSTTTCCCTTSG------GG------CTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcCCeE--EEeecCCC-C--CCCCeEEEEECCCccccCCCCCC------cC------ChHHHHhcCCEEEEEecccccc
Confidence 4466544 67788652 2 23489999999997654432111 11 1235665 799999988872 2
Q ss_pred CCCCCcc-cchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEeccCC
Q 002164 724 IGEGDEE-ANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAY 794 (958)
Q Consensus 724 ~G~G~~~-~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~ 794 (958)
.|++... .....+...+.|+.+|++|++++- ..|++||.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 156 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 156 FGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 3443321 111223456899999999999862 37999999999999999998887653 46899999999854
No 399
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.87 E-value=6.4e-08 Score=108.12 Aligned_cols=237 Identities=11% Similarity=0.054 Sum_probs=118.6
Q ss_pred cceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceee---c--cCCCCccccccccceEEec--------CCeEE
Q 002164 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP---L--FQSPDIYLNAIFDNFVWVN--------NSTLL 258 (958)
Q Consensus 192 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~---l--t~~~~~~~~~~~~~~~wsp--------DG~~l 258 (958)
....++++++.|+... ....|.+|++++++... + ..... ..+..++|+| ||++|
T Consensus 93 ~~~~~~~~~~~las~~---------~d~~v~lw~~~~~~~~~~~~~~~~~gH~----~~v~~v~~~p~~~~~~~~d~~~l 159 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVC---------QDNTVRLIITKNETIITQHVLGGKSGHH----NFVNDIDIADVYSADNRLAEQVI 159 (393)
T ss_dssp ----CCEEEEEEEEEE---------TTSCEEEEEEETTEEEEEEEECTTTSCS----SCEEEEEEEEEECTTCSEEEEEE
T ss_pred ceeecCCCCCEEEEEe---------CCCcEEEEECCCCccceeeeecccCCCC----CceEEEEEccccccccCCCCCEE
Confidence 3345667777777754 24567777777775432 1 11122 2278999998 89999
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CC-eeeecCCC-cccc
Q 002164 259 VCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DG-TVKEIGPP-AVYT 335 (958)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g-~~~~l~~~-~~~~ 335 (958)
+... ....+.++|+ ++ ....+... ..+.
T Consensus 160 as~s-------------------------------------------------~D~tv~~Wd~~~~~~~~~~~~~~~~v~ 190 (393)
T 4gq1_A 160 ASVG-------------------------------------------------DDCTLIIWRLTDEGPILAGYPLSSPGI 190 (393)
T ss_dssp EEEE-------------------------------------------------TTSEEEEEEEETTEEEEEEEECSSCEE
T ss_pred EEEE-------------------------------------------------CCCeEEEEECCCCceeeeecCCCCCcE
Confidence 9762 1233555565 44 33333333 6678
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEE-EeccCCcccc--------Ccc----cccccccCcc
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVR-ELCDLPLAED--------IPI----AFNSVRKGMR 402 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~-~l~~~~~~~~--------~p~----~~~~~~~~~~ 402 (958)
.++|+|++..++++... ++.|.+||+.++... .+...+.... .+. ...+....+.
T Consensus 191 ~v~~~p~~~~~l~~~~~------------d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 191 SVQFRPSNPNQLIVGER------------NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEETTEEEEEEEEET------------TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred EEEECCCCCceEEecCC------------CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 89999999765544432 348999999854321 1111110000 000 0112223456
Q ss_pred eeeee-cCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeecccc------------------Cceee
Q 002164 403 SINWR-SDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRY------------------GGISW 463 (958)
Q Consensus 403 ~~~~s-pDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~------------------~~~~~ 463 (958)
.+.|+ |||+.|+.. ...+.+.+|++ ..+.....+......+ ....|
T Consensus 259 ~v~~~~~dg~~l~s~-------------s~d~~i~vwd~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
T 4gq1_A 259 NVRWIGSDGSGILAM-------------CKSGAWLRWNL--FANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACP 323 (393)
T ss_dssp EEEEETTTTCEEEEE-------------CTTSEEEEEEC---------------------CCSCSEEEECSSCCSSCCEE
T ss_pred eeeeecCCCCEEEEE-------------eCCCCEEEEEC--ccCCCCceEeeecCccccEEEccccccccccCcceeEEE
Confidence 67776 899887653 34556777775 2222222221111111 12334
Q ss_pred ecC-CceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 464 CDD-SLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 464 spD-g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
+|. ++.++.+...+ ..|++++...+. ...........+.+ ++|||||++|+...
T Consensus 324 ~~~~~~~~~~sgs~D---g~V~lwd~~~~~--~~~~~~~~~~~V~s------vafspdG~~LA~as 378 (393)
T 4gq1_A 324 HPRYMDYFATAHSQH---GLIQLINTYEKD--SNSIPIQLGMPIVD------FCWHQDGSHLAIAT 378 (393)
T ss_dssp CSSCTTEEEEEETTT---TEEEEEETTCTT--CCEEEEECSSCEEE------EEECTTSSEEEEEE
T ss_pred ccCCCCEEEEEECCC---CEEEEEECCCCc--EEEEecCCCCcEEE------EEEcCCCCEEEEEe
Confidence 443 34444433333 246666666642 22222222233444 89999999999886
No 400
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.87 E-value=3.4e-07 Score=98.13 Aligned_cols=228 Identities=10% Similarity=0.010 Sum_probs=121.6
Q ss_pred ceEEEEEcCCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcc
Q 002164 314 TQLVLVSLDGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPI 392 (958)
Q Consensus 314 ~~l~~~~~~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~ 392 (958)
..|++++.+|+.+.+... .....++++|||+.++... . ...|.+++.++ ..+.+..... ..+
T Consensus 67 ~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~-~------------~~~v~~~~~~g-~~~~~~~~~~--~~~- 129 (305)
T 3dr2_A 67 RRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEH-G------------RRAITRSDADG-QAHLLVGRYA--GKR- 129 (305)
T ss_dssp TEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEET-T------------TTEEEEECTTS-CEEEEECEET--TEE-
T ss_pred CEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEEC-C------------CCEEEEECCCC-CEEEEEeccC--CCc-
Confidence 458888876655555444 5567889999999554432 1 23788888874 3444432110 000
Q ss_pred cccccccCcceeeeecCCCCceEEEEeccCCC------cccccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecC
Q 002164 393 AFNSVRKGMRSINWRSDKPSTLYWAETQDGGD------AKVEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDD 466 (958)
Q Consensus 393 ~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spD 466 (958)
...+..+.++|||+ +++ ++..-|.. ..........||+++. ++++.+.+. .......++|+||
T Consensus 130 -----~~~~~~i~~d~dG~-l~~-td~~~g~~~~~~~~~~~~~~~~~~v~~~d~---~~g~~~~~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 130 -----LNSPNDLIVARDGA-IWF-TDPPFGLRKPSQGCPADPELAHHSVYRLPP---DGSPLQRMA-DLDHPNGLAFSPD 198 (305)
T ss_dssp -----CSCCCCEEECTTSC-EEE-ECCSGGGSCGGGSCCCCCSSSCEEEEEECS---SSCCCEEEE-EESSEEEEEECTT
T ss_pred -----cCCCCCEEECCCCC-EEE-eCcCCCccccccccccccccCCCeEEEEcC---CCCcEEEEe-cCCCCcceEEcCC
Confidence 02345789999997 333 22110100 0000012356899884 556666665 4344467899999
Q ss_pred CceEEEEEeccc--cceEEEEEcCCCCCCC-cEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccC
Q 002164 467 SLALVYESWYKT--RRTRTWVISPGSKDVA-PRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGN 543 (958)
Q Consensus 467 g~~l~~~~~~~~--~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~ 543 (958)
|+.|++...... ....|++++++++... .....+.......+ +.++++|+ |+...
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg------i~~d~~G~-lwv~~--------------- 256 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG------FCVDRGGW-LWSSS--------------- 256 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS------EEECTTSC-EEECC---------------
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe------EEECCCCC-EEEec---------------
Confidence 999887754320 1246888887653101 11111111111011 55677776 32221
Q ss_pred CCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEEC
Q 002164 544 GATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSW 616 (958)
Q Consensus 544 ~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~ 616 (958)
...|++|+.++.....+..... +. ...|++|++.|++.... .+|.+++
T Consensus 257 -------~~gv~~~~~~g~~~~~~~~~~~------~~-------~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 257 -------GTGVCVFDSDGQLLGHIPTPGT------AS-------NCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp -------SSEEEEECTTSCEEEEEECSSC------CC-------EEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred -------CCcEEEECCCCCEEEEEECCCc------ee-------EEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 1148899986554444433221 11 24677888887776642 5777654
No 401
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.86 E-value=3.7e-07 Score=103.43 Aligned_cols=220 Identities=17% Similarity=0.185 Sum_probs=133.8
Q ss_pred ceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCCCCCcccc
Q 002164 114 LSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFPDGAKLNF 193 (958)
Q Consensus 114 ~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~ 193 (958)
..+++||++|+....+ +.|.+|++.+ + .....+.+ +...+..
T Consensus 137 ~~~~~d~~~l~~g~~d---------------------------------g~i~iwd~~~-~--~~~~~~~~--h~~~v~~ 178 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRD---------------------------------NTIKIWDKNT-L--ECKRILTG--HTGSVLC 178 (435)
T ss_dssp EEEECCSSEEEEEESS---------------------------------SCEEEEESSS-C--CEEEEECC--CSSCEEE
T ss_pred EEEEECCCEEEEEeCC---------------------------------CeEEEEeCCC-C--eEEEEEcC--CCCcEEE
Confidence 3677899999888765 5799999854 2 23344443 2345777
Q ss_pred eeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCC
Q 002164 194 VTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKP 273 (958)
Q Consensus 194 ~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~ 273 (958)
..| ||+.|+... ....|.+|++.+++........... +..++|++ ..|+...
T Consensus 179 l~~--~~~~l~sg~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~l~~~~--~~l~s~s----------- 230 (435)
T 1p22_A 179 LQY--DERVIITGS---------SDSTVRVWDVNTGEMLNTLIHHCEA----VLHLRFNN--GMMVTCS----------- 230 (435)
T ss_dssp EEC--CSSEEEEEE---------TTSCEEEEESSSCCEEEEECCCCSC----EEEEECCT--TEEEEEE-----------
T ss_pred EEE--CCCEEEEEc---------CCCeEEEEECCCCcEEEEEcCCCCc----EEEEEEcC--CEEEEee-----------
Confidence 777 788887754 2568899999988765544333322 66777864 3555441
Q ss_pred CCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee----eecCCC-ccccccccCCCCcEEE
Q 002164 274 LVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV----KEIGPP-AVYTSLDPSPDEKYIL 347 (958)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~----~~l~~~-~~~~~~~~SpDGk~l~ 347 (958)
..+.|.++++ ++.. ..+... ..+..+.| ||+.|+
T Consensus 231 --------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 270 (435)
T 1p22_A 231 --------------------------------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIV 270 (435)
T ss_dssp --------------------------------------TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEE
T ss_pred --------------------------------------CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEE
Confidence 2234677777 5532 233333 55666666 888888
Q ss_pred EEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 348 ISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
..+.+ +.+.+||+.++.. ..+..+. ..+..+.| +++.++..
T Consensus 271 s~~~d-------------g~i~vwd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~g---------- 312 (435)
T 1p22_A 271 SASGD-------------RTIKVWNTSTCEFVRTLNGHK-------------RGIACLQY--RDRLVVSG---------- 312 (435)
T ss_dssp EEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEE--ETTEEEEE----------
T ss_pred EEeCC-------------CeEEEEECCcCcEEEEEcCCC-------------CcEEEEEe--CCCEEEEE----------
Confidence 87733 4899999986543 3333211 22344555 55555542
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEE
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (958)
+..+.|.+||+ ..+.....+..+...+..+.| |++.|+..+.++. .++|.+
T Consensus 313 ---~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~--i~vwd~ 363 (435)
T 1p22_A 313 ---SSDNTIRLWDI--ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK--IKVWDL 363 (435)
T ss_dssp ---ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC--EEEEEH
T ss_pred ---eCCCeEEEEEC--CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc--EEEEEC
Confidence 44567899996 234334444445555666777 7888777664433 556654
No 402
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.84 E-value=3.1e-08 Score=104.28 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=56.8
Q ss_pred HHHHHHHC--CcEEEEcCCCCCCCCCCcccc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC
Q 002164 704 SVLLWLAR--GFAILGGPTTPIIGEGDEEAN-DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA 780 (958)
Q Consensus 704 ~~~~la~~--G~~vl~~~~~~~~G~G~~~~~-~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 780 (958)
....|+++ ||.|+++ +. |+|.+... ..+......++.++++++...... .+++.++||||||.++..++.++
T Consensus 27 ~~~~L~~~~~g~~v~~~---d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~lvGhSmGG~ia~~~a~~~ 101 (279)
T 1ei9_A 27 IKKMVEKKIPGIHVLSL---EI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL-QQGYNAMGFSQGGQFLRAVAQRC 101 (279)
T ss_dssp HHHHHHHHSTTCCEEEC---CC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG-TTCEEEEEETTHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCcEEEEE---Ee-CCCCccccccccccCHHHHHHHHHHHHHhhhhc-cCCEEEEEECHHHHHHHHHHHHc
Confidence 45566664 8899994 44 77765321 122222334444555555442211 26899999999999999999999
Q ss_pred CCc-eeEEEEeccCC
Q 002164 781 PHL-FCCGIARSGAY 794 (958)
Q Consensus 781 p~~-~~a~v~~~~~~ 794 (958)
|+. ++.+|+.++..
T Consensus 102 ~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 102 PSPPMVNLISVGGQH 116 (279)
T ss_dssp CSSCEEEEEEESCCT
T ss_pred CCcccceEEEecCcc
Confidence 984 99999887654
No 403
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=98.84 E-value=6.6e-09 Score=107.44 Aligned_cols=169 Identities=14% Similarity=0.156 Sum_probs=90.9
Q ss_pred HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeChHHHHHHHHHHh------CCC
Q 002164 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRR-GVAHPSKIAVGGHSYGAFMTANLLAH------APH 782 (958)
Q Consensus 710 ~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~-~~~d~~~i~l~G~S~GG~~a~~~a~~------~p~ 782 (958)
+.+|.|++ .|.+|+|.+... ...|+.+.++.+.+. +....+++.++||||||.+|+.+|.+ .|+
T Consensus 37 ~~~~~vi~---~Dl~GhG~S~~~------~~~~~~~~~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~ 107 (242)
T 2k2q_B 37 QGECEMLA---AEPPGHGTNQTS------AIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQ 107 (242)
T ss_dssp CCSCCCEE---EECCSSCCSCCC------TTTHHHHHHHHTTTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSC
T ss_pred CCCeEEEE---EeCCCCCCCCCC------CcCCHHHHHHHHHHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCC
Confidence 45799999 666788877432 123455555555433 22123589999999999999999986 566
Q ss_pred ceeEEEEeccCCCCCC-CCC----------CcccccchhhhcH-----------HHHH---hcCcccccCCCCCCEEEEe
Q 002164 783 LFCCGIARSGAYNRTL-TPF----------GFQNEDRTLWEAT-----------STYV---EMSPFMSANKLKKPILLVH 837 (958)
Q Consensus 783 ~~~a~v~~~~~~~~~~-~~~----------~~~~~~~~~~~~~-----------~~~~---~~sp~~~~~~~~~P~Lii~ 837 (958)
++-......+...... ... ...........+. ..+. .+.. ..+.++++|+|+++
T Consensus 108 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~ 186 (242)
T 2k2q_B 108 AVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFN 186 (242)
T ss_dssp SEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEE
T ss_pred EEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEe
Confidence 5321111111111000 000 0000000000000 1111 1111 12567899999999
Q ss_pred eCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
|++|..++ .....+ +..-...+++++++ ||... .++...+.+.+.+||.+.
T Consensus 187 G~~D~~~~---~~~~~~----~~~~~~~~~~~~~~-gH~~~-~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 187 GLDDKKCI---RDAEGW----KKWAKDITFHQFDG-GHMFL-LSQTEEVAERIFAILNQH 237 (242)
T ss_dssp ECSSCCHH---HHHHHH----HTTCCCSEEEEEEC-CCSHH-HHHCHHHHHHHHHHHHTT
T ss_pred eCCCCcCH---HHHHHH----HHHhcCCeEEEEeC-CceeE-cCCHHHHHHHHHHHhhcc
Confidence 99998753 333333 22222234777886 99763 455567788888888754
No 404
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.83 E-value=3.9e-09 Score=121.81 Aligned_cols=128 Identities=18% Similarity=0.194 Sum_probs=88.6
Q ss_pred EEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCC-CCCCCc
Q 002164 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPI-IGEGDE 729 (958)
Q Consensus 652 l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~-~G~G~~ 729 (958)
+...+|.|.... .++|+||++|||.+..+...... +. ...|++ .|++|+.++|+-. .|+...
T Consensus 93 l~lnv~~P~~~~----~~~Pv~v~iHGGg~~~g~~~~~~------~~------~~~la~~~~~vvv~~nYRlg~~Gf~~~ 156 (529)
T 1p0i_A 93 LYLNVWIPAPKP----KNATVLIWIYGGGFQTGTSSLHV------YD------GKFLARVERVIVVSMNYRVGALGFLAL 156 (529)
T ss_dssp CEEEEEEESSCC----SSEEEEEEECCSTTTSCCTTCGG------GC------THHHHHHHCCEEEEECCCCHHHHHCCC
T ss_pred CeEEEeeCCCCC----CCCeEEEEECCCccccCCCCccc------cC------hHHHhccCCeEEEEecccccccccccC
Confidence 445678887532 34899999999976544321110 11 235665 7999999888722 233222
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEeccCCC
Q 002164 730 -EANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAYN 795 (958)
Q Consensus 730 -~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~~ 795 (958)
......+...+.|+.+|++|++++ ...|+++|.|+|+|+||.++..++... ..+|+++|+.+|...
T Consensus 157 ~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 157 PGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp TTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred CCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 111122345688999999999986 247999999999999999999888763 468999999998754
No 405
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.82 E-value=2e-09 Score=124.57 Aligned_cols=130 Identities=18% Similarity=0.134 Sum_probs=87.4
Q ss_pred EEEEEEec-----CCCCCCCC--CCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCC-
Q 002164 652 LSATLYLP-----PGYDPSKD--GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPI- 723 (958)
Q Consensus 652 l~~~l~~P-----~~~~~~~~--~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~- 723 (958)
|...+|.| ... ..++ .++|+||++|||.+..+...... +. ...|+++|++|+.++|+..
T Consensus 91 L~lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~------~~------~~~l~~~g~vvv~~nYRl~~ 157 (551)
T 2fj0_A 91 IHANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDL------HG------PEYLVSKDVIVITFNYRLNV 157 (551)
T ss_dssp CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTT------CB------CTTGGGGSCEEEEECCCCHH
T ss_pred eEEEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccc------cC------HHHHHhCCeEEEEeCCcCCc
Confidence 55677888 321 1111 12899999999976544322111 11 2356789999999888732
Q ss_pred CCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEeccCC
Q 002164 724 IGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAY 794 (958)
Q Consensus 724 ~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~ 794 (958)
.|+.........+...+.|+.+|++|+.++ ...|+++|.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 158 ~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 158 YGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 232221111112345689999999999986 23699999999999999999988876 356899999999863
No 406
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.82 E-value=3.4e-09 Score=118.91 Aligned_cols=161 Identities=12% Similarity=-0.034 Sum_probs=103.3
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~a 746 (958)
.|+||++||.... ....+.......|++ .||.|++ .|.+|+|.+.... ........|+.+.
T Consensus 70 ~~~vvllHG~~~s-------------~~~~w~~~~~~~l~~~~~~~Vi~---~D~~g~g~s~~~~~~~~~~~~~~dl~~~ 133 (432)
T 1gpl_A 70 RKTRFIIHGFTDS-------------GENSWLSDMCKNMFQVEKVNCIC---VDWKGGSKAQYSQASQNIRVVGAEVAYL 133 (432)
T ss_dssp SEEEEEECCTTCC-------------TTSHHHHHHHHHHHHHCCEEEEE---EECHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-------------CCchHHHHHHHHHHhcCCcEEEE---EECccccCccchhhHhhHHHHHHHHHHH
Confidence 6899999996321 101111123455665 7999999 4555666653221 1234556889999
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCCCCCCCCCCcccccchhhhcHHHHHhcCccccc
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSA 826 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~ 826 (958)
+++|.++..++.+++.++|||+||.+|+.++.+.|++++.++..+|..-..... . . ..+.++
T Consensus 134 i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~------~-~-------~~~l~~---- 195 (432)
T 1gpl_A 134 VQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDT------P-E-------EVRLDP---- 195 (432)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTC------C-T-------TTSCCG----
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCC------C-h-------hhccCc----
Confidence 999986544567899999999999999999999999999999887753211000 0 0 000111
Q ss_pred CCCCCCEEEEeeCCCCCCCCCh---HHHHHHHHHHHhCCCcEEEEEeCCCCccC
Q 002164 827 NKLKKPILLVHGEEDNNSGTLT---MQSDRFFNALKGHGALCRLVILPFESHGY 877 (958)
Q Consensus 827 ~~~~~P~Lii~G~~D~~v~~~~---~~~~~~~~~l~~~g~~~~~~~~p~~~H~~ 877 (958)
....++.++||..|..|| . .... .. ..+.+||+.||.-
T Consensus 196 -~da~~V~vIHt~~d~lVP--~~~~g~~~-------~l---g~~dfypngg~~q 236 (432)
T 1gpl_A 196 -SDAKFVDVIHTDISPILP--SLGFGMSQ-------KV---GHMDFFPNGGKDM 236 (432)
T ss_dssp -GGSSEEEEECSCCSCHHH--HCCCBCSS-------CC---SSEEEEEGGGSSC
T ss_pred -CCCceEEEEEcCCccccc--cccccccc-------cc---cceEEccCCCCCC
Confidence 123589999999999886 3 1111 11 2455689989953
No 407
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.80 E-value=5.1e-09 Score=120.75 Aligned_cols=132 Identities=17% Similarity=0.173 Sum_probs=89.9
Q ss_pred eCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHH-HCCcEEEEcCCCCC-
Q 002164 646 RKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWL-ARGFAILGGPTTPI- 723 (958)
Q Consensus 646 ~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la-~~G~~vl~~~~~~~- 723 (958)
+.|... ..+|.|... . .++|+||++|||.+..+...... +. ...|+ ++|++|+.++||-.
T Consensus 91 sedcl~--lnv~~P~~~-~---~~~Pv~v~iHGG~~~~g~~~~~~------~~------~~~la~~~~~vvv~~nYRlg~ 152 (537)
T 1ea5_A 91 SEDCLY--LNIWVPSPR-P---KSTTVMVWIYGGGFYSGSSTLDV------YN------GKYLAYTEEVVLVSLSYRVGA 152 (537)
T ss_dssp CSCCCE--EEEEECSSC-C---SSEEEEEEECCSTTTCCCTTCGG------GC------THHHHHHHTCEEEECCCCCHH
T ss_pred CCcCCe--EEEeccCCC-C---CCCeEEEEECCCcccCCCCCCCc------cC------hHHHHhcCCEEEEEeccCccc
Confidence 345544 467888753 1 34899999999976544321110 11 23556 78999999888722
Q ss_pred CCCCCc-ccchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEeccCCC
Q 002164 724 IGEGDE-EANDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGAYN 795 (958)
Q Consensus 724 ~G~G~~-~~~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~~~ 795 (958)
.|+... ......+...+.|+.+|++|++++- ..|+++|.|+|+|+||.++..++.. ...+|+++|+.+|...
T Consensus 153 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 153 FGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 232221 0111223456899999999999862 3799999999999999999888775 2368999999998653
No 408
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.75 E-value=2.9e-06 Score=92.68 Aligned_cols=254 Identities=13% Similarity=0.038 Sum_probs=130.7
Q ss_pred eceeEEEccCCCCCCceeeeccCC-------CCC-cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeec
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFP-------DGA-KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL 234 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~-------~~~-~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~l 234 (958)
+.|++.|+.++- .+.+.++... .+. .......+||| |+.+...+ ..+++...|.++|.++++.+.-
T Consensus 106 ~~I~viD~~t~p--~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~--~~g~~~g~v~vlD~~T~~v~~~ 179 (462)
T 2ece_A 106 SRIYIIDTKPNP--REPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGN--EEGEGPGGILMLDHYSFEPLGK 179 (462)
T ss_dssp CCEEEEECCSCT--TSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEE--TTSCSCCEEEEECTTTCCEEEE
T ss_pred CeEEEEECCCCC--CCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCC--cCCCCCCeEEEEECCCCeEEEE
Confidence 378999986532 2222222110 011 23344689999 43333211 2356678999999998886544
Q ss_pred cCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcc
Q 002164 235 FQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATT 314 (958)
Q Consensus 235 t~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~ 314 (958)
...+... ......+.|+||++.++.+.- ..|.+ -+.+ .+..+ ... ....
T Consensus 180 ~~~~~~~-~~~~Yd~~~~p~~~~mvsS~w----------g~p~~-----~~~g------------~~~~~--~~~-~~~d 228 (462)
T 2ece_A 180 WEIDRGD-QYLAYDFWWNLPNEVLVSSEW----------AVPNT-----IEDG------------LKLEH--LKD-RYGN 228 (462)
T ss_dssp CCSBCTT-CCCCCCEEEETTTTEEEECBC----------CCHHH-----HTTC------------CCTTT--HHH-HSCC
T ss_pred EccCCCC-ccccceEEECCCCCEEEEccC----------cCccc-----cccc------------cchhh--hhh-ccCC
Confidence 3322110 000225788999997775410 00000 0000 00000 000 1346
Q ss_pred eEEEEEc-CCeee-ecCCC---cccc--ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEecc--CC
Q 002164 315 QLVLVSL-DGTVK-EIGPP---AVYT--SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD--LP 385 (958)
Q Consensus 315 ~l~~~~~-~g~~~-~l~~~---~~~~--~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~--~~ 385 (958)
+|.++++ +++.. .+.-+ .... .+.++|||+++++...... ....++|++|..+++..+.+.. .+
T Consensus 229 ~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~-------~~Lss~V~v~~~d~g~~~~~~vIdi~ 301 (462)
T 2ece_A 229 RIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSL-------KDLSSSIWLWFYEDGKWNAEKVIEIP 301 (462)
T ss_dssp EEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEET-------TTCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeec-------cCCCceEEEEEecCCceeEEEEEeCC
Confidence 7999999 66432 33221 2222 2467999999888774100 0123477777666544332221 11
Q ss_pred c---cccCc---ccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe--ecc-
Q 002164 386 L---AEDIP---IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK--LDL- 456 (958)
Q Consensus 386 ~---~~~~p---~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~--~~~- 456 (958)
. ....| ..|.++......+.+||||+.|++. + ...+.|.++++ .+.++.+.+.. ..+
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVS-n-----------rg~d~VavfdV--~d~~~~~lv~~I~tGG~ 367 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLS-L-----------WGIGEVRQYDI--SNPFKPVLTGKVKLGGI 367 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEE-E-----------TTTTEEEEEEC--SSTTSCEEEEEEECBTT
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEE-e-----------CCCCEEEEEEe--cCCCCcEEEEEEEeCCe
Confidence 1 11111 1122222346789999999998884 1 23467888886 23344444421 111
Q ss_pred --------------ccCceeeecCCceEEEEE
Q 002164 457 --------------RYGGISWCDDSLALVYES 474 (958)
Q Consensus 457 --------------~~~~~~~spDg~~l~~~~ 474 (958)
.-..+.+||||++|+.+.
T Consensus 368 ~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 368 FHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 236789999999998875
No 409
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.73 E-value=1.5e-08 Score=116.77 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=87.0
Q ss_pred EEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHH-HHHH-HCCcEEEEcCCCCCC-CCCC
Q 002164 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWL-ARGFAILGGPTTPII-GEGD 728 (958)
Q Consensus 652 l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la-~~G~~vl~~~~~~~~-G~G~ 728 (958)
+...+|.|++.... .++|+||++|||++..+... .+. +...+ ..++ ..|++|+.++||... |+..
T Consensus 98 l~l~v~~P~~~~~~--~~~Pv~v~iHGGg~~~g~~~--------~~~--~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~ 165 (534)
T 1llf_A 98 LTINVVRPPGTKAG--ANLPVMLWIFGGGFEIGSPT--------IFP--PAQMVTKSVLMGKPIIHVAVNYRVASWGFLA 165 (534)
T ss_dssp CEEEEEECTTCCTT--CCEEEEEEECCSTTTSCCGG--------GSC--CHHHHHHHHHTTCCCEEEEECCCCHHHHHCC
T ss_pred eEEEEEECCCCCCC--CCceEEEEEeCCCcccCCCc--------ccC--chHHHHHHHhcCCCEEEEEeCCCCCCCCCCC
Confidence 55578899764332 34899999999976544321 111 11111 1222 368999998886432 2211
Q ss_pred cc--cchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhC--------CCceeEEEEeccC
Q 002164 729 EE--ANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHA--------PHLFCCGIARSGA 793 (958)
Q Consensus 729 ~~--~~~~~~~~~~~D~~~av~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~~~~~ 793 (958)
.. .....+...+.|+.+|++|++++ ...|++||.|+|+|+||.+++.++... +.+|+++|+.+|.
T Consensus 166 ~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 166 GDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp SHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 10 01123346789999999999986 237999999999999999888777653 4689999999984
No 410
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.72 E-value=2.5e-05 Score=85.34 Aligned_cols=119 Identities=12% Similarity=-0.063 Sum_probs=61.0
Q ss_pred cccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEE-eccCCccccCcccccccccCcceeeeecCCCCc
Q 002164 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRE-LCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (958)
Q Consensus 335 ~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l 413 (958)
..+..+||| |+++..... .+..++.+.++|.++.++.. +....... .-...+.|+||++.+
T Consensus 141 h~~~~~pdG--i~Vs~~g~~------~g~~~g~v~vlD~~T~~v~~~~~~~~~~~----------~~~Yd~~~~p~~~~m 202 (462)
T 2ece_A 141 HTVHCGPDA--IYISALGNE------EGEGPGGILMLDHYSFEPLGKWEIDRGDQ----------YLAYDFWWNLPNEVL 202 (462)
T ss_dssp EEEEECSSC--EEEEEEEET------TSCSCCEEEEECTTTCCEEEECCSBCTTC----------CCCCCEEEETTTTEE
T ss_pred cceeECCCe--EEEEcCCCc------CCCCCCeEEEEECCCCeEEEEEccCCCCc----------cccceEEECCCCCEE
Confidence 345689999 555554432 23345789999998665433 32111110 112357889999954
Q ss_pred eEEEEe------ccCCCcc-cccccCCeEEEEeCCCCCCCCc-eEEEee-c-cccCc--eeeecCCceEEEEEe
Q 002164 414 LYWAET------QDGGDAK-VEVTPRDIIYTQQAEPVQGEGP-EILHKL-D-LRYGG--ISWCDDSLALVYESW 475 (958)
Q Consensus 414 ~~~~~~------~~~~~~~-~~~~~~~~l~~~~~~~~~g~~~-~~l~~~-~-~~~~~--~~~spDg~~l~~~~~ 475 (958)
+. ++- ..|-... +.....+.|.+|+. ++++. ..+.-. . ..... ++|+|||++++....
T Consensus 203 vs-S~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~---~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 203 VS-SEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL---RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp EE-CBCCCHHHHTTCCCTTTHHHHSCCEEEEEET---TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred EE-ccCcCccccccccchhhhhhccCCEEEEEEC---CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence 44 221 0110000 00023567999996 43332 223221 1 11122 346999998777665
No 411
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.71 E-value=6.2e-07 Score=97.73 Aligned_cols=251 Identities=10% Similarity=0.012 Sum_probs=132.1
Q ss_pred eEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecC-CCCCCCCCCCCCCCCceeeecCCcccccchhhhh
Q 002164 220 RVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPL-LRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDL 298 (958)
Q Consensus 220 ~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~ 298 (958)
.|+++|.++++...-...+.. - .+++||||+.++++... .++.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-----P-~i~~spDg~~lyVan~~~~r~~------------------------------ 90 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-----S-LAVAGHSGSDFALASTSFARSA------------------------------ 90 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-----C-EEEECTTSSCEEEEEEEETTTT------------------------------
T ss_pred eEEEEECCCCeEEEEEeCCCC-----C-ceEECCCCCEEEEEcccccccc------------------------------
Confidence 899999999887654433332 2 68999999999987210 0000
Q ss_pred ccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC--------ccccccccCCCCcEEEEEeecCCccccccCCCCCcee
Q 002164 299 LKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP--------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQV 368 (958)
Q Consensus 299 ~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~--------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i 368 (958)
..+ ....|.++|+ +++. ..+.-+ .....+.+|||||++++..... ...+
T Consensus 91 -~G~---------~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~-----------~~~v 149 (368)
T 1mda_H 91 -KGK---------RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS-----------SAAA 149 (368)
T ss_dssp -SSS---------EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS-----------SCEE
T ss_pred -cCC---------CCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC-----------CCeE
Confidence 000 2355888998 7643 333211 2356789999999999885321 1256
Q ss_pred EE--EeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEec---cCC--------------------
Q 002164 369 GV--WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQ---DGG-------------------- 423 (958)
Q Consensus 369 ~l--~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~---~~~-------------------- 423 (958)
.+ +|+.+ .+.+.........|. ....-+..++||+.+++..+.. ++.
T Consensus 150 ~V~~iD~~t--v~~i~v~~~~~~~p~------g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~ 221 (368)
T 1mda_H 150 GLSVPGASD--DQLTKSASCFHIHPG------AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp EEEETTTEE--EEEEECSSCCCCEEE------ETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred EEEEEchhh--ceEEECCCceEEccC------CCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcccccc
Confidence 66 67655 333321100000000 1111234556666544432210 000
Q ss_pred -CcccccccCCeEEEEeCCCCCCCCceEEEee----------ccc---cCceeeecCCceEEEEEe-c-c-----ccceE
Q 002164 424 -DAKVEVTPRDIIYTQQAEPVQGEGPEILHKL----------DLR---YGGISWCDDSLALVYESW-Y-K-----TRRTR 482 (958)
Q Consensus 424 -~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~----------~~~---~~~~~~spDg~~l~~~~~-~-~-----~~~~~ 482 (958)
...+..+. +.++++|. .++..+.+... .+. ...+.++|||+++++..+ . . . ..
T Consensus 222 ~~~~~~vs~-~~V~viD~---~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~--~~ 295 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDI---PAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA--EN 295 (368)
T ss_dssp TTEEEECBS-SCCEEEEC---CSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE--EE
T ss_pred CCEEEEEcC-CEEEEEEC---CCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC--CC
Confidence 00011122 56777774 33332222110 011 122689999999888755 2 1 1 23
Q ss_pred EEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCC
Q 002164 483 TWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTG 562 (958)
Q Consensus 483 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g 562 (958)
+.++|+.+.+.......... ..+ +.|+|||+++++.... ....|.++|++++
T Consensus 296 ~~ViD~~t~~vv~~i~vg~~---p~g------i~~s~Dg~~l~va~~~-------------------~~~~VsVID~~t~ 347 (368)
T 1mda_H 296 TSSVTASVGQTSGPISNGHD---SDA------IIAAQDGASDNYANSA-------------------GTEVLDIYDAASD 347 (368)
T ss_dssp EEEEESSSCCEEECCEEEEE---ECE------EEECCSSSCEEEEEET-------------------TTTEEEEEESSSC
T ss_pred EEEEECCCCeEEEEEECCCC---cce------EEECCCCCEEEEEccC-------------------CCCeEEEEECCCC
Confidence 55899888521111111111 112 7899999988877631 0136999999998
Q ss_pred ceEEEec
Q 002164 563 SKERIWE 569 (958)
Q Consensus 563 ~~~~l~~ 569 (958)
+...-..
T Consensus 348 kvv~~I~ 354 (368)
T 1mda_H 348 QDQSSVE 354 (368)
T ss_dssp EEEEECC
T ss_pred cEEEEEE
Confidence 8765554
No 412
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.70 E-value=8.2e-06 Score=92.49 Aligned_cols=268 Identities=11% Similarity=0.044 Sum_probs=153.3
Q ss_pred eecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002164 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (958)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (958)
.+++||++|+... ....|.+|++.+++........... +..+.|+ ++.|+...
T Consensus 124 ~~~~~g~~l~sg~---------~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~--~~~l~s~~------------ 176 (445)
T 2ovr_B 124 CLQFCGNRIVSGS---------DDNTLKVWSAVTGKCLRTLVGHTGG----VWSSQMR--DNIIISGS------------ 176 (445)
T ss_dssp EEEEETTEEEEEE---------TTSCEEEEETTTCCEEEECCCCSSC----EEEEEEE--TTEEEEEE------------
T ss_pred EEEEcCCEEEEEE---------CCCcEEEEECCCCcEEEEEcCCCCC----EEEEEec--CCEEEEEe------------
Confidence 5778899988855 2568999999988766544433322 6677776 44666541
Q ss_pred CCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-ccccccccCCCCcEEEEEee
Q 002164 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AVYTSLDPSPDEKYILISSI 351 (958)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~~~~~~~SpDGk~l~~~~~ 351 (958)
..+.|.++++ +|+.. .+... ..+..+.| +++.|+..+.
T Consensus 177 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s~ 217 (445)
T 2ovr_B 177 -------------------------------------TDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSR 217 (445)
T ss_dssp -------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred -------------------------------------CCCeEEEEECCcCcEEEEECCCCCcEEEEEe--cCCEEEEEeC
Confidence 2245778888 66533 34333 55666667 4667776663
Q ss_pred cCCccccccCCCCCceeEEEeccCceE-EEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccc
Q 002164 352 HRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (958)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~ 430 (958)
++.+.+||+.++.. ..+..+. ..+..+.| ||+.++.. +
T Consensus 218 -------------dg~i~~wd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~l~~~-------------~ 256 (445)
T 2ovr_B 218 -------------DATLRVWDIETGQCLHVLMGHV-------------AAVRCVQY--DGRRVVSG-------------A 256 (445)
T ss_dssp -------------TSEEEEEESSSCCEEEEEECCS-------------SCEEEEEE--CSSCEEEE-------------E
T ss_pred -------------CCEEEEEECCCCcEEEEEcCCc-------------ccEEEEEE--CCCEEEEE-------------c
Confidence 34899999985543 3332211 23345555 77776653 4
Q ss_pred cCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCC
Q 002164 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP 510 (958)
Q Consensus 431 ~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (958)
..+.|.+|++ ..+.....+......+..+.| |++.|+.....+. |.++++.++ +...........
T Consensus 257 ~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~----i~i~d~~~~--~~~~~~~~~~~~----- 321 (445)
T 2ovr_B 257 YDFMVKVWDP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS----IRVWDVETG--NCIHTLTGHQSL----- 321 (445)
T ss_dssp TTSCEEEEEG--GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC----EEEEETTTC--CEEEEECCCCSC-----
T ss_pred CCCEEEEEEC--CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe----EEEEECCCC--CEEEEEcCCccc-----
Confidence 4567889986 223233333334455666677 8888877654432 555666553 222222222111
Q ss_pred CCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCcccc
Q 002164 511 GSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGD 590 (958)
Q Consensus 511 ~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 590 (958)
...++++++.++....+ ..|.+||+.+++.......... ....+. +
T Consensus 322 ---v~~~~~~~~~l~~~~~d---------------------g~i~vwd~~~~~~~~~~~~~~~-~~~~v~---------~ 367 (445)
T 2ovr_B 322 ---TSGMELKDNILVSGNAD---------------------STVKIWDIKTGQCLQTLQGPNK-HQSAVT---------C 367 (445)
T ss_dssp ---EEEEEEETTEEEEEETT---------------------SCEEEEETTTCCEEEEECSTTS-CSSCEE---------E
T ss_pred ---EEEEEEeCCEEEEEeCC---------------------CeEEEEECCCCcEEEEEccCCC-CCCCEE---------E
Confidence 13456677776665421 2599999988876655443211 000111 2
Q ss_pred ccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002164 591 LYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (958)
Q Consensus 591 ~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~ 622 (958)
++.+++.++.... ...+.++++.+++..
T Consensus 368 ~~~~~~~l~s~~~----dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 368 LQFNKNFVITSSD----DGTVKLWDLKTGEFI 395 (445)
T ss_dssp EEECSSEEEEEET----TSEEEEEETTTCCEE
T ss_pred EEECCCEEEEEeC----CCeEEEEECCCCcee
Confidence 3334555444332 356899998887643
No 413
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.70 E-value=1.7e-08 Score=116.42 Aligned_cols=130 Identities=23% Similarity=0.307 Sum_probs=86.4
Q ss_pred EEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHH-HHHH-HCCcEEEEcCCCCCC-CCCC
Q 002164 652 LSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSV-LLWL-ARGFAILGGPTTPII-GEGD 728 (958)
Q Consensus 652 l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la-~~G~~vl~~~~~~~~-G~G~ 728 (958)
+...+|.|.+.... .++|+||++|||++..+.. ..+. +...+ +.++ ..|++|+.++|+... |+..
T Consensus 106 l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~--------~~~~--~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~ 173 (544)
T 1thg_A 106 LYLNVFRPAGTKPD--AKLPVMVWIYGGAFVYGSS--------AAYP--GNSYVKESINMGQPVVFVSINYRTGPFGFLG 173 (544)
T ss_dssp CEEEEEEETTCCTT--CCEEEEEEECCCTTCCSGG--------GGCC--SHHHHHHHHHTTCCCEEEEECCCCHHHHHCC
T ss_pred eEEEEEeCCCCCCC--CCCcEEEEECCCccccCCc--------cccC--chHHHHHHhhcCCCEEEEeCCCCCCcccCCC
Confidence 44578889764322 3599999999997655432 1111 11112 1222 258999998886432 2111
Q ss_pred ccc--chhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--------CCceeEEEEeccC
Q 002164 729 EEA--NDRFVEQLVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--------PHLFCCGIARSGA 793 (958)
Q Consensus 729 ~~~--~~~~~~~~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~~~~~ 793 (958)
... ....+...+.|+.+|++|++++- ..|++||.|+|+|+||.+++.++... ..+|+++|+.+|.
T Consensus 174 ~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 174 GDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp SHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 100 01223456899999999999862 37999999999999999998887752 4689999999985
No 414
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.69 E-value=1.7e-06 Score=90.55 Aligned_cols=190 Identities=16% Similarity=0.126 Sum_probs=120.5
Q ss_pred CCeEEEEEeeccccCCCCCceEEEEEcCCCceeec-----cCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002164 200 GKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL-----FQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (958)
Q Consensus 200 G~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~l-----t~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (958)
|.+|+|+. ...|++++++++..+.+ ...+.. ....++|.++++.|+++..
T Consensus 1 ~~~l~~~~----------~~~I~~~~~~g~~~~~~~~~~~~~~~~~----~~~gi~~d~~~~~ly~~d~----------- 55 (267)
T 1npe_A 1 GTHLLFAQ----------TGKIERLPLERNTMKKTEAKAFLHIPAK----VIIGLAFDCVDKVVYWTDI----------- 55 (267)
T ss_dssp CEEEEEEE----------EEEEEEEEESSSCBCGGGCEEEEEEEEE----EEEEEEEETTTTEEEEEET-----------
T ss_pred CcEEEEEc----------CCeEEEEEecCcccccccceeeecCCCC----cEEEEEEecCCCEEEEEEC-----------
Confidence 56788865 34799999988654321 111111 1458899998888887610
Q ss_pred CCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecC-CC-ccccccccCCCCcEEEEEee
Q 002164 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIG-PP-AVYTSLDPSPDEKYILISSI 351 (958)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~-~~-~~~~~~~~SpDGk~l~~~~~ 351 (958)
....|+++++ ++..+.+. .. .....++++|+++.|+++..
T Consensus 56 -------------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 56 -------------------------------------SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp -------------------------------------TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET
T ss_pred -------------------------------------CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC
Confidence 2346889998 44444333 22 45677889999998888763
Q ss_pred cCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccccccc
Q 002164 352 HRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTP 431 (958)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~ 431 (958)
. .+.|.+++++++..+.+..... ..+..++++|++..|++. +.. ..
T Consensus 99 ~------------~~~I~~~~~~g~~~~~~~~~~~------------~~P~~i~vd~~~g~lyv~-~~~---------~~ 144 (267)
T 1npe_A 99 Q------------LDRIEVAKMDGTQRRVLFDTGL------------VNPRGIVTDPVRGNLYWT-DWN---------RD 144 (267)
T ss_dssp T------------TTEEEEEETTSCSCEEEECSSC------------SSEEEEEEETTTTEEEEE-ECC---------SS
T ss_pred C------------CCEEEEEEcCCCCEEEEEECCC------------CCccEEEEeeCCCEEEEE-ECC---------CC
Confidence 3 2478899998765444432110 234688999988877763 211 11
Q ss_pred CCeEEEEeCCCCCCCCceEEEeec-cccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 432 RDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 432 ~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
...|++++. +|...+.+.... .....+++++|++.|+++.... .+|+++++++.
T Consensus 145 ~~~I~~~~~---dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~---~~I~~~~~~g~ 199 (267)
T 1npe_A 145 NPKIETSHM---DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT---HRAECLNPAQP 199 (267)
T ss_dssp SCEEEEEET---TSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTEE
T ss_pred CcEEEEEec---CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCC---CEEEEEecCCC
Confidence 357888885 665555553222 2345689999999988875433 47999998863
No 415
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.69 E-value=1.5e-08 Score=117.39 Aligned_cols=140 Identities=18% Similarity=0.137 Sum_probs=86.8
Q ss_pred EeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCC
Q 002164 645 QRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPI 723 (958)
Q Consensus 645 ~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~ 723 (958)
.+.|. +...+|.|..... ...++|+||++|||.+..+..... .+..........|+. .|++|+.++||-.
T Consensus 76 ~sedc--l~lnv~~P~~~~~-~~~~~PV~v~iHGGg~~~Gs~~~~------~~~~~~~~~~~~la~~~~vvvV~~nYRLg 146 (579)
T 2bce_A 76 GNEDC--LYLNIWVPQGRKE-VSHDLPVMIWIYGGAFLMGASQGA------NFLSNYLYDGEEIATRGNVIVVTFNYRVG 146 (579)
T ss_dssp SCSCC--CEEEEEEEECSSS-CCCSEEEEEECCCCSEEEC-------------CTTGGGCCHHHHHHHTCEEEEECCCCH
T ss_pred CCCCC--CEEEEEECCCCCC-CCCCCeEEEEECCCcccCCCCCcc------ccccccccChHHHhcCCCEEEEEeCCccc
Confidence 34455 4456788875321 123489999999997654432110 000000000234554 5799999888722
Q ss_pred -CCCCCcccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHh--CCCceeEEEEeccC
Q 002164 724 -IGEGDEEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAH--APHLFCCGIARSGA 793 (958)
Q Consensus 724 -~G~G~~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~~~ 793 (958)
.|+.............+.|+.+|++|++++ ...|+++|.|+|+|+||.++..++.. ...+|+++|+.+|.
T Consensus 147 ~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 147 PLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred cccCCcCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 232221111111123578999999999886 23799999999999999999988775 34689999999875
No 416
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.68 E-value=4.1e-08 Score=114.36 Aligned_cols=115 Identities=18% Similarity=0.159 Sum_probs=79.5
Q ss_pred CCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCC-CCCCCCCc-------ccchhhHHH
Q 002164 668 GPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTT-PIIGEGDE-------EANDRFVEQ 738 (958)
Q Consensus 668 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~-~~~G~G~~-------~~~~~~~~~ 738 (958)
.++|+||++|||++..+...... +. ...|++ .|++|+.++|| +..|+... ......+..
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~~------~~------~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~ 206 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLDI------YN------ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNV 206 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGG------GC------CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCH
T ss_pred CCCCEEEEECCCcccCCCCCCCC------CC------chhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcc
Confidence 35899999999976544321111 11 234554 79999998887 22233211 011112345
Q ss_pred HHHHHHHHHHHHHHcC---CCCCCcEEEEEeChHHHHHHHHHHhC--CCceeEEEEeccCC
Q 002164 739 LVACAEAAVEEVVRRG---VAHPSKIAVGGHSYGAFMTANLLAHA--PHLFCCGIARSGAY 794 (958)
Q Consensus 739 ~~~D~~~av~~l~~~~---~~d~~~i~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~~~~ 794 (958)
.+.|+.+|++|++++- ..|+++|.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 207 gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 207 GLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 6889999999999862 36999999999999999998887753 36899999999864
No 417
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.67 E-value=2.5e-06 Score=91.50 Aligned_cols=240 Identities=9% Similarity=0.052 Sum_probs=130.0
Q ss_pred eceeEEEccCCCCCCceeeeccC---CCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeec-cCCC
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGF---PDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPL-FQSP 238 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~---~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~l-t~~~ 238 (958)
+.|++++..+ +..+.+... .....+....++||+..|+++.. ...|++++.+ |+.+.+ ....
T Consensus 46 ~~i~~~d~~~----g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~d~~-g~~~~~~~~~~ 111 (314)
T 1pjx_A 46 GEILRIDLKT----GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVVQTD-GTFEEIAKKDS 111 (314)
T ss_dssp CEEEEECTTT----CCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEEETT-SCEEECCSBCT
T ss_pred CEEEEEeCCC----CcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEEeCC-CCEEEEEeccC
Confidence 3677877543 333333210 01124667889999334544331 2379999998 777666 4322
Q ss_pred CccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEE
Q 002164 239 DIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVL 318 (958)
Q Consensus 239 ~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~ 318 (958)
.......+..+++++||++.+......... . +...... .....|++
T Consensus 112 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~--~-------------------------~~~~~~~-------~~~~~l~~ 157 (314)
T 1pjx_A 112 EGRRMQGCNDCAFDYEGNLWITAPAGEVAP--A-------------------------DYTRSMQ-------EKFGSIYC 157 (314)
T ss_dssp TSCBCBCCCEEEECTTSCEEEEECBCBCTT--S-------------------------CCCBTTS-------SSCEEEEE
T ss_pred CCccccCCcCEEECCCCCEEEEecCccccc--c-------------------------ccccccc-------CCCCeEEE
Confidence 110011255788999997554331110000 0 0000000 02346888
Q ss_pred EEcCCeeeecCCC-ccccccccC----CCCcEEEEEeecCCccccccCCCCCceeEEEecc-CceEE---EeccCCcccc
Q 002164 319 VSLDGTVKEIGPP-AVYTSLDPS----PDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVR---ELCDLPLAED 389 (958)
Q Consensus 319 ~~~~g~~~~l~~~-~~~~~~~~S----pDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~-~~~~~---~l~~~~~~~~ 389 (958)
++.+|+...+... .....++|+ |||+.|++.... .+.|++|+++ .+... .+...+...
T Consensus 158 ~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~- 224 (314)
T 1pjx_A 158 FTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP------------TKKLWSYDIKGPAKIENKKVWGHIPGTH- 224 (314)
T ss_dssp ECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT------------TTEEEEEEEEETTEEEEEEEEEECCCCS-
T ss_pred ECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECC------------CCeEEEEECCCCCccccceEEEECCCCC-
Confidence 8876655544332 344677899 999988877532 2478999876 33321 111111100
Q ss_pred CcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCC-CCCceEEEeeccccCceeeecCCc
Q 002164 390 IPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQ-GEGPEILHKLDLRYGGISWCDDSL 468 (958)
Q Consensus 390 ~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~~~~l~~~~~~~~~~~~spDg~ 468 (958)
...+..+.+++||+ +++. . ...+.|++++. + +.....+.........++|+|||+
T Consensus 225 --------~~~p~~i~~d~~G~-l~v~-~-----------~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~i~~~~dg~ 280 (314)
T 1pjx_A 225 --------EGGADGMDFDEDNN-LLVA-N-----------WGSSHIEVFGP---DGGQPKMRIRCPFEKPSNLHFKPQTK 280 (314)
T ss_dssp --------SCEEEEEEEBTTCC-EEEE-E-----------ETTTEEEEECT---TCBSCSEEEECSSSCEEEEEECTTSS
T ss_pred --------CCCCCceEECCCCC-EEEE-E-----------cCCCEEEEEcC---CCCcEeEEEeCCCCCceeEEECCCCC
Confidence 01245688999995 3331 1 12457888884 4 444444443334566789999999
Q ss_pred eEEEEEeccccceEEEEEcCCC
Q 002164 469 ALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 469 ~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
.|+++...+ ..|++++++.
T Consensus 281 ~l~v~~~~~---~~l~~~~~~~ 299 (314)
T 1pjx_A 281 TIFVTEHEN---NAVWKFEWQR 299 (314)
T ss_dssp EEEEEETTT---TEEEEEECSS
T ss_pred EEEEEeCCC---CeEEEEeCCC
Confidence 887775433 3588888764
No 418
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.67 E-value=4.4e-06 Score=87.45 Aligned_cols=224 Identities=11% Similarity=0.044 Sum_probs=133.5
Q ss_pred ceEEEEEcCC-eeee------cCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCC
Q 002164 314 TQLVLVSLDG-TVKE------IGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP 385 (958)
Q Consensus 314 ~~l~~~~~~g-~~~~------l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~ 385 (958)
..|++++++| ..+. +... .....++|+|+++.|+++... .+.|++++++++..+.+....
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~------------~~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS------------EPSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT------------TTEEEEEESSSCCCEEEECTT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC------------CCEEEEEecCCCCcEEEEECC
Confidence 4588888844 3221 1111 345688999999999888633 348999999876554433211
Q ss_pred ccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeee
Q 002164 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWC 464 (958)
Q Consensus 386 ~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~s 464 (958)
...+..++++|++..|++. + ...+.|++++. +|...+.+.... .....++++
T Consensus 78 ------------~~~p~~ia~d~~~~~lyv~-d-----------~~~~~I~~~~~---~g~~~~~~~~~~~~~P~~i~vd 130 (267)
T 1npe_A 78 ------------LGSPEGIALDHLGRTIFWT-D-----------SQLDRIEVAKM---DGTQRRVLFDTGLVNPRGIVTD 130 (267)
T ss_dssp ------------CCCEEEEEEETTTTEEEEE-E-----------TTTTEEEEEET---TSCSCEEEECSSCSSEEEEEEE
T ss_pred ------------CCCccEEEEEecCCeEEEE-E-----------CCCCEEEEEEc---CCCCEEEEEECCCCCccEEEEe
Confidence 0245688999998877763 2 23457888885 665555553322 234568999
Q ss_pred cCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCC
Q 002164 465 DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNG 544 (958)
Q Consensus 465 pDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~ 544 (958)
|++..|+++.... ...+|+++++++. ....+.........+ +++++++++|++....
T Consensus 131 ~~~g~lyv~~~~~-~~~~I~~~~~dg~--~~~~~~~~~~~~P~g------ia~d~~~~~lyv~d~~-------------- 187 (267)
T 1npe_A 131 PVRGNLYWTDWNR-DNPKIETSHMDGT--NRRILAQDNLGLPNG------LTFDAFSSQLCWVDAG-------------- 187 (267)
T ss_dssp TTTTEEEEEECCS-SSCEEEEEETTSC--CCEEEECTTCSCEEE------EEEETTTTEEEEEETT--------------
T ss_pred eCCCEEEEEECCC-CCcEEEEEecCCC--CcEEEEECCCCCCcE------EEEcCCCCEEEEEECC--------------
Confidence 9988888875432 1257999988774 223332211111111 6789998888877521
Q ss_pred CCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002164 545 ATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (958)
Q Consensus 545 ~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~ 622 (958)
...|+++|++++..+.+...... . ..+..|++.+++.... ...+++++..+|+..
T Consensus 188 ------~~~I~~~~~~g~~~~~~~~~~~~-----P---------~gi~~d~~~lyva~~~---~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 188 ------THRAECLNPAQPGRRKVLEGLQY-----P---------FAVTSYGKNLYYTDWK---TNSVIAMDLAISKEM 242 (267)
T ss_dssp ------TTEEEEEETTEEEEEEEEECCCS-----E---------EEEEEETTEEEEEETT---TTEEEEEETTTTEEE
T ss_pred ------CCEEEEEecCCCceEEEecCCCC-----c---------eEEEEeCCEEEEEECC---CCeEEEEeCCCCCce
Confidence 23699999976554444321110 1 1234566666664432 246888887776543
No 419
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.66 E-value=7.5e-07 Score=94.35 Aligned_cols=123 Identities=15% Similarity=0.105 Sum_probs=69.3
Q ss_pred CCCCceecCC----CCEEEEEecCCCCCchhcccccceeeceeecCCCCCccc--eeeEeceeEEEccCCCCCCceeeec
Q 002164 110 PLPALSFSPQ----RDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSR--MSFYTGIGIHQLFPDGKLGQEIEIQ 183 (958)
Q Consensus 110 ~~~~~~~SPD----G~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~dg~~~~~~~lt 183 (958)
.+..+++||| |++++..... ..++.+. .+..... .+.+..|.+|++..||. ....++
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~-------------~g~lv~ss~~g~d~~V~~~~~s~dG~--~~~s~~ 175 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNI--KAVLGLT-------------KRRLVSSSGTLSDQQVEVMTFAEDGG--GKENQF 175 (356)
T ss_dssp EEEEECC------CCEEEEEEEEE--EEEEEET-------------TTEEEEEESSSTTCEEEEEEECTTSC--EEEEEE
T ss_pred ceEEEEECCCccccccEEEeCCCe--EEEEecC-------------CCcEEEecccCCCCcEEEEEECCCCc--eeeeec
Confidence 5678899999 9999886542 1111111 1100000 00135788999876662 233333
Q ss_pred cCCCCCcccceeecC---CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEE
Q 002164 184 GFPDGAKLNFVTWSQ---DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVC 260 (958)
Q Consensus 184 ~~~~~~~~~~~~wSP---DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~ 260 (958)
.++ ..+...+||| ||+.|+-.+ ....|.+||+++|+..+........ ...+...+|||||+.++.
T Consensus 176 ~~~--~~v~~l~fs~~~g~~~~LaSgS---------~D~TIkIWDl~TGk~l~tL~g~~~~-v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 176 LMP--PEETILTFAEVQGMQEALLGTT---------IMNNIVIWNLKTGQLLKKMHIDDSY-QASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp ECC--CSSCEEEEEEEETSTTEEEEEE---------TTSEEEEEETTTCCEEEEEECCC----CCCEEEEEEETTEEEEE
T ss_pred cCC--CceeeEEeeccCCCCceEEEec---------CCCcEEEEECCCCcEEEEEcCCCcc-eeeeEEEEECCCCCEEEE
Confidence 333 4567788888 778777754 3678999999998865443222111 011345689999998876
Q ss_pred E
Q 002164 261 T 261 (958)
Q Consensus 261 ~ 261 (958)
.
T Consensus 244 ~ 244 (356)
T 2w18_A 244 L 244 (356)
T ss_dssp E
T ss_pred e
Confidence 5
No 420
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.65 E-value=7.3e-08 Score=104.13 Aligned_cols=174 Identities=13% Similarity=0.089 Sum_probs=102.0
Q ss_pred HCCcEEEEcCCCCCCCCCCc-----ccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC----
Q 002164 710 ARGFAILGGPTTPIIGEGDE-----EANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---- 780 (958)
Q Consensus 710 ~~G~~vl~~~~~~~~G~G~~-----~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---- 780 (958)
..+|.|+. .+.+|+|.+ ...........+|+.+.++.+.. ..++.++|||+||.+|..+|.+.
T Consensus 115 ~~~~~v~~---~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~-----~~p~~l~G~S~GG~vA~~~A~~l~~~~ 186 (319)
T 2hfk_A 115 QEERDFLA---VPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----DAPVVLLGHAGGALLAHELAFRLERAH 186 (319)
T ss_dssp TTTCCEEE---ECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----TSCEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEE---ecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHHHHHHHHHHHHhh
Confidence 37899999 555666665 33333456666666666554421 24799999999999999999875
Q ss_pred CCceeEEEEeccCCCCCCCCC-C-------------cccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCCCCC
Q 002164 781 PHLFCCGIARSGAYNRTLTPF-G-------------FQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNNSGT 846 (958)
Q Consensus 781 p~~~~a~v~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~v~~ 846 (958)
++.+++++++++......... . +.............|...-.......+++|+|+++| .|..++
T Consensus 187 g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~- 264 (319)
T 2hfk_A 187 GAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGD- 264 (319)
T ss_dssp SCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSC-
T ss_pred CCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCC-
Confidence 456899988876422110000 0 000000000000111110001123678899999999 999887
Q ss_pred ChHH-HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHhh
Q 002164 847 LTMQ-SDRFFNALKGHGALCRLVILPFESHGYAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 847 ~~~~-~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~l 898 (958)
... ...+.+. ....++++.+|+ +|.....+....+.+.+.+||.+..
T Consensus 265 -~~~~~~~~~~~---~~~~~~~~~v~g-~H~~~~~e~~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 265 -WQEERGDWRAH---WDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAIE 312 (319)
T ss_dssp -CCGGGCCCSCC---CSSCSEEEEESS-CTTHHHHTCHHHHHHHHHHHHHHHH
T ss_pred -ccccccchhhc---CCCCCEEEEeCC-CcHHHHHHhHHHHHHHHHHHHHhcC
Confidence 544 2222111 123468888995 8974322467788888999998754
No 421
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.63 E-value=2.9e-06 Score=91.87 Aligned_cols=192 Identities=8% Similarity=-0.009 Sum_probs=111.3
Q ss_pred CCCeEEEEEeeccccCCCCCceEEEEEcCCCceee-ccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCC
Q 002164 199 DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP-LFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPL 277 (958)
Q Consensus 199 DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~-lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~ 277 (958)
++++|+.+.. ....|.++|+++++... +..... ...+++++|| .|+++..
T Consensus 52 ~~~~lyv~~~--------~~~~v~viD~~t~~~~~~i~~~~~------p~~i~~~~~g-~lyv~~~-------------- 102 (328)
T 3dsm_A 52 RDGIGWIVVN--------NSHVIFAIDINTFKEVGRITGFTS------PRYIHFLSDE-KAYVTQI-------------- 102 (328)
T ss_dssp ETTEEEEEEG--------GGTEEEEEETTTCCEEEEEECCSS------EEEEEEEETT-EEEEEEB--------------
T ss_pred ECCEEEEEEc--------CCCEEEEEECcccEEEEEcCCCCC------CcEEEEeCCC-eEEEEEC--------------
Confidence 4666666542 24689999999888743 422211 4578899999 5555510
Q ss_pred CCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCCc------cccccccCCCCcEEEEE
Q 002164 278 GPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPPA------VYTSLDPSPDEKYILIS 349 (958)
Q Consensus 278 ~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~~------~~~~~~~SpDGk~l~~~ 349 (958)
....|+++|. +++.. .+..+. ....+++ ++++|++.
T Consensus 103 ----------------------------------~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~ 146 (328)
T 3dsm_A 103 ----------------------------------WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVN 146 (328)
T ss_dssp ----------------------------------SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEE
T ss_pred ----------------------------------CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEE
Confidence 1245888898 77544 332222 4445566 67777766
Q ss_pred eecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccccc
Q 002164 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEV 429 (958)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~ 429 (958)
... ..+.|.++|+++++........ ..+..+.++|||+ +++.. ..+...... .
T Consensus 147 ~~~-----------~~~~v~viD~~t~~~~~~i~~g-------------~~p~~i~~~~dG~-l~v~~-~~~~~~~~~-~ 199 (328)
T 3dsm_A 147 CWS-----------YQNRILKIDTETDKVVDELTIG-------------IQPTSLVMDKYNK-MWTIT-DGGYEGSPY-G 199 (328)
T ss_dssp ECT-----------TCCEEEEEETTTTEEEEEEECS-------------SCBCCCEECTTSE-EEEEB-CCBCTTCSS-C
T ss_pred cCC-----------CCCEEEEEECCCCeEEEEEEcC-------------CCccceEEcCCCC-EEEEE-CCCccCCcc-c
Confidence 421 1348999999876543321111 2345788999998 44421 111000000 0
Q ss_pred ccCCeEEEEeCCCCCCCCce-EEEee-ccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 430 TPRDIIYTQQAEPVQGEGPE-ILHKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 430 ~~~~~l~~~~~~~~~g~~~~-~l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
...+.|+++|. ++++.. .+.-. ......++|+|||+.|++... .++++|++++
T Consensus 200 ~~~~~v~~id~---~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~~t~ 254 (328)
T 3dsm_A 200 YEAPSLYRIDA---ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPVEAD 254 (328)
T ss_dssp BCCCEEEEEET---TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEETTCS
T ss_pred cCCceEEEEEC---CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEECCCC
Confidence 11367999995 444333 33221 124567899999999887632 5899998875
No 422
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.62 E-value=2e-06 Score=97.06 Aligned_cols=151 Identities=13% Similarity=0.139 Sum_probs=93.7
Q ss_pred CcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCC-----ce------eeccCCCCccccccccceEEecC-Ce
Q 002164 189 AKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTG-----KA------RPLFQSPDIYLNAIFDNFVWVNN-ST 256 (958)
Q Consensus 189 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g-----~~------~~lt~~~~~~~~~~~~~~~wspD-G~ 256 (958)
..+...+|||||++|+..... +.....|.+|++.++ +. .++..... ..+..++|+|+ ++
T Consensus 93 ~~v~~l~~spdg~~lav~~~s-----gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~----~~V~~v~~~p~~~~ 163 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMS-----SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG----GMVIDMKWNPTVPS 163 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEE-----TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG----GSEEEEEECSSCTT
T ss_pred CcccEEEEcCCCCEEEEEEec-----cCCCceEEEEEccccccCCcCCcceeeeeeccCCCC----CceEEEEECCCCCC
Confidence 358889999999999863210 334668889988754 11 11111111 22778999998 67
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeee-ecCCC-cc
Q 002164 257 LLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVK-EIGPP-AV 333 (958)
Q Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~-~l~~~-~~ 333 (958)
.|+... ....|.++|+ ++... ..... ..
T Consensus 164 ~las~s-------------------------------------------------~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 164 MVAVCL-------------------------------------------------ADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp EEEEEE-------------------------------------------------TTSCEEEEEESSSEEEEEEECGGGC
T ss_pred EEEEEE-------------------------------------------------CCCeEEEEEcCCCcceeeccCCCCc
Confidence 777651 2244777787 66332 22222 56
Q ss_pred ccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCc
Q 002164 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPST 413 (958)
Q Consensus 334 ~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l 413 (958)
+..++|||||++|+..+.+ +.|.+||+++...+.+........ .....+..+.|++++..+
T Consensus 195 v~~v~wspdg~~lasgs~d-------------g~v~iwd~~~~~~~~~~~~~~~~~------~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQN-------------GTVVQYLPTLQEKKVIPCPPFYES------DHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEEEEECTTSSCEEEEETT-------------SCEEEECTTCCEEEEECCCTTCCT------TSCEEEEEEEEEETTEEE
T ss_pred eeEEEEcCCCCEEEEEcCC-------------CcEEEEccCCcccccccCCcccCC------CCceeEEEEEEecCceEE
Confidence 7899999999999988733 489999998554444433211100 001245679999988766
Q ss_pred eEE
Q 002164 414 LYW 416 (958)
Q Consensus 414 ~~~ 416 (958)
+..
T Consensus 256 ~~~ 258 (434)
T 2oit_A 256 IVY 258 (434)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 423
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.60 E-value=3.9e-06 Score=94.92 Aligned_cols=212 Identities=11% Similarity=0.082 Sum_probs=122.8
Q ss_pred eecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCC
Q 002164 195 TWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPL 274 (958)
Q Consensus 195 ~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~ 274 (958)
.+++||++|+.... ...|.+|++.+++........... +..++| |++.|+...
T Consensus 138 ~~~~d~~~l~~g~~---------dg~i~iwd~~~~~~~~~~~~h~~~----v~~l~~--~~~~l~sg~------------ 190 (435)
T 1p22_A 138 CLQYDDQKIVSGLR---------DNTIKIWDKNTLECKRILTGHTGS----VLCLQY--DERVIITGS------------ 190 (435)
T ss_dssp EEECCSSEEEEEES---------SSCEEEEESSSCCEEEEECCCSSC----EEEEEC--CSSEEEEEE------------
T ss_pred EEEECCCEEEEEeC---------CCeEEEEeCCCCeEEEEEcCCCCc----EEEEEE--CCCEEEEEc------------
Confidence 45669999988653 568899999988876554433332 556666 888888661
Q ss_pred CCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCC-ccccccccCCCCcEEEEEee
Q 002164 275 VPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPP-AVYTSLDPSPDEKYILISSI 351 (958)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~-~~~~~~~~SpDGk~l~~~~~ 351 (958)
..+.|.++++ +|+. ..+... ..+..+.|++ +.|+..+.
T Consensus 191 -------------------------------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~ 231 (435)
T 1p22_A 191 -------------------------------------SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSK 231 (435)
T ss_dssp -------------------------------------TTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEET
T ss_pred -------------------------------------CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeC
Confidence 2245778888 6643 344433 6677888874 46666553
Q ss_pred cCCccccccCCCCCceeEEEeccCceEEEe-ccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccc
Q 002164 352 HRPYSFIVPCGRFPRQVGVWTTDGIFVREL-CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT 430 (958)
Q Consensus 352 ~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l-~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~ 430 (958)
++.|.+||+.++....+ .... +....+..+.| ||+.++.. +
T Consensus 232 -------------dg~i~vwd~~~~~~~~~~~~~~----------~~~~~v~~~~~--~~~~l~s~-------------~ 273 (435)
T 1p22_A 232 -------------DRSIAVWDMASPTDITLRRVLV----------GHRAAVNVVDF--DDKYIVSA-------------S 273 (435)
T ss_dssp -------------TSCEEEEECSSSSCCEEEEEEC----------CCSSCEEEEEE--ETTEEEEE-------------E
T ss_pred -------------CCcEEEEeCCCCCCceeeeEec----------CCCCcEEEEEe--CCCEEEEE-------------e
Confidence 34899999985432211 1110 11123345556 77766652 4
Q ss_pred cCCeEEEEeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCC
Q 002164 431 PRDIIYTQQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDP 510 (958)
Q Consensus 431 ~~~~l~~~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (958)
..+.|.+||+ ..+.....+......+..+.| +++.|+....++ .|.++|+.++ +...........+..
T Consensus 274 ~dg~i~vwd~--~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg----~i~iwd~~~~--~~~~~~~~h~~~v~~-- 341 (435)
T 1p22_A 274 GDRTIKVWNT--STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN----TIRLWDIECG--ACLRVLEGHEELVRC-- 341 (435)
T ss_dssp TTSEEEEEET--TTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTS----CEEEEETTTC--CEEEEECCCSSCEEE--
T ss_pred CCCeEEEEEC--CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCC----eEEEEECCCC--CEEEEEeCCcCcEEE--
Confidence 4667899996 233333444444555555666 566776665433 2555666653 333333333333222
Q ss_pred CCCceEeccCCceEEEEe
Q 002164 511 GSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 511 ~~~~~~~spdG~~l~~~~ 528 (958)
+.| ||++|+...
T Consensus 342 ----~~~--~~~~l~sg~ 353 (435)
T 1p22_A 342 ----IRF--DNKRIVSGA 353 (435)
T ss_dssp ----EEC--CSSEEEEEE
T ss_pred ----EEe--cCCEEEEEe
Confidence 334 788777665
No 424
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.59 E-value=1e-05 Score=90.33 Aligned_cols=222 Identities=8% Similarity=-0.088 Sum_probs=122.0
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCce-eec----cCCC
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA-RPL----FQSP 238 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~-~~l----t~~~ 238 (958)
.|+++++.+ +....+.. ...... ++|+|||+.|+.+.. .+...||+++.+++.. +.+ ....
T Consensus 153 ~I~~id~~~----g~~~~~~~--~~~~~~-ia~~~~g~~l~~~d~-------~~~~~I~~~d~~~~~~~~~~g~~~~~~~ 218 (409)
T 3hrp_A 153 RVRLISVDD----NKVTTVHP--GFKGGK-PAVTKDKQRVYSIGW-------EGTHTVYVYMKASGWAPTRIGQLGSTFS 218 (409)
T ss_dssp EEEEEETTT----TEEEEEEE--TCCBCB-CEECTTSSEEEEEBS-------STTCEEEEEEGGGTTCEEEEEECCTTSC
T ss_pred cEEEEECCC----CEEEEeec--cCCCCc-eeEecCCCcEEEEec-------CCCceEEEEEcCCCceeEEeeeccchhc
Confidence 577877743 44444422 122334 999999998777542 2233899999887654 233 1011
Q ss_pred CccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEE
Q 002164 239 DIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVL 318 (958)
Q Consensus 239 ~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~ 318 (958)
.. ...++++|++..|++.. ...+|++
T Consensus 219 ~~-----p~~iav~p~~g~lyv~d-------------------------------------------------~~~~I~~ 244 (409)
T 3hrp_A 219 GK-----IGAVALDETEEWLYFVD-------------------------------------------------SNKNFGR 244 (409)
T ss_dssp SC-----CCBCEECTTSSEEEEEC-------------------------------------------------TTCEEEE
T ss_pred CC-----cEEEEEeCCCCeEEEEE-------------------------------------------------CCCcEEE
Confidence 11 45789999555566550 1235888
Q ss_pred EEc-CCeeeec----CCC-ccc--c-ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCC---c
Q 002164 319 VSL-DGTVKEI----GPP-AVY--T-SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP---L 386 (958)
Q Consensus 319 ~~~-~g~~~~l----~~~-~~~--~-~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~---~ 386 (958)
++. ++....+ ..+ ... . .++|+|++..|+++... .+.|+.++.++.. ..+.... .
T Consensus 245 ~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~~-~~~~g~~~~~g 311 (409)
T 3hrp_A 245 FNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------------LSSVYKITPDGEC-EWFCGSATQKT 311 (409)
T ss_dssp EETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------------TTEEEEECTTCCE-EEEEECTTCCS
T ss_pred EECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------------CCEEEEEecCCCE-EEEEeCCCCCC
Confidence 888 6654444 222 111 2 78999988888777532 3478899888763 3332211 0
Q ss_pred cccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccc-cCCeEEEEeCCCCCCCCceEEEeec----------
Q 002164 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVT-PRDIIYTQQAEPVQGEGPEILHKLD---------- 455 (958)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~~~~~l~~~~---------- 455 (958)
....+ ........+..++++|||+ |++ ++ . ....|++++. ..+....+....
T Consensus 312 ~~dg~-~~~~~~~~P~gia~d~dG~-lyv-ad-----------~~~~~~I~~~~~---~~G~v~~~~g~~~~~g~~~g~~ 374 (409)
T 3hrp_A 312 VQDGL-REEALFAQPNGMTVDEDGN-FYI-VD-----------GFKGYCLRKLDI---LDGYVSTVAGQVDVASQIDGTP 374 (409)
T ss_dssp CBCEE-GGGCBCSSEEEEEECTTCC-EEE-EE-----------TTTTCEEEEEET---TTTEEEEEEECTTCBSCCCBST
T ss_pred cCCCc-ccccEeCCCeEEEEeCCCC-EEE-Ee-----------CCCCCEEEEEEC---CCCEEEEEeCCCCCCCcCCCCh
Confidence 00000 0000012357899999998 544 22 2 3557888884 334444443320
Q ss_pred -----cccCceeeecCCceEEEEEeccccceEEEEEc
Q 002164 456 -----LRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (958)
Q Consensus 456 -----~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~ 487 (958)
.....+++++|| .|+++. ..+ .+|++++
T Consensus 375 ~~~~~~~P~giavd~~g-~lyVad-~~n--~~Ir~i~ 407 (409)
T 3hrp_A 375 LEATFNYPYDICYDGEG-GYWIAE-AWG--KAIRKYA 407 (409)
T ss_dssp TTCCBSSEEEEEECSSS-EEEEEE-STT--CEEEEEE
T ss_pred hceEeCCceEEEEcCCC-CEEEEE-CCC--CeEEEEE
Confidence 123357888885 444443 222 4566654
No 425
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.59 E-value=4.6e-08 Score=113.63 Aligned_cols=128 Identities=17% Similarity=0.127 Sum_probs=84.3
Q ss_pred EEEEEEecCCCCCC-CCCCceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC-CcEEEEcCCCCCC-CCCC
Q 002164 652 LSATLYLPPGYDPS-KDGPLPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPII-GEGD 728 (958)
Q Consensus 652 l~~~l~~P~~~~~~-~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~vl~~~~~~~~-G~G~ 728 (958)
|...+|.|...... ...++|+||++|||.+..+... .+. ...|+++ |++|+.++||-.. |+..
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~--------~~~------~~~la~~~~~vvv~~~YRl~~~Gfl~ 177 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGN--------LYD------GSVLASYGNVIVITVNYRLGVLGFLS 177 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGG--------GSC------CHHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCC--------ccC------chhhhccCCEEEEEeCCcCcccccCc
Confidence 55578889753211 1234899999999976554321 121 1245654 6999998886321 2211
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEEeccC
Q 002164 729 EEANDRFVEQLVACAEAAVEEVVRR---GVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIARSGA 793 (958)
Q Consensus 729 ~~~~~~~~~~~~~D~~~av~~l~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~~~ 793 (958)
.......+...+.|+.+|++|+.++ -..|+++|.|+|+|+||.++..++.... .+|+.+|+.+|.
T Consensus 178 ~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 178 TGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp CSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 1111112245689999999999986 2379999999999999999998887543 569999998874
No 426
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.55 E-value=5.3e-07 Score=93.08 Aligned_cols=164 Identities=13% Similarity=0.030 Sum_probs=90.5
Q ss_pred HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeE
Q 002164 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFCC 786 (958)
Q Consensus 710 ~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~a 786 (958)
..+|.|+.+++ .|++. ..+++.+.++.+ . ...++.++|||+||.++..++.+. ++++++
T Consensus 46 ~~~~~v~~~d~---~g~~~----------~~~~~~~~i~~~---~--~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~ 107 (244)
T 2cb9_A 46 NHKAAVYGFHF---IEEDS----------RIEQYVSRITEI---Q--PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSD 107 (244)
T ss_dssp TTTSEEEEECC---CCSTT----------HHHHHHHHHHHH---C--SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCceEEEEcC---CCHHH----------HHHHHHHHHHHh---C--CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccE
Confidence 46899999554 45432 233444444332 1 125799999999999999998864 567888
Q ss_pred EEEeccCCCCCC-CCCCccccc----chhh-h----cHHHHHhcCc-ccccCCCCCCEEEEeeC--CCCCCCCChHHHHH
Q 002164 787 GIARSGAYNRTL-TPFGFQNED----RTLW-E----ATSTYVEMSP-FMSANKLKKPILLVHGE--EDNNSGTLTMQSDR 853 (958)
Q Consensus 787 ~v~~~~~~~~~~-~~~~~~~~~----~~~~-~----~~~~~~~~sp-~~~~~~~~~P~Lii~G~--~D~~v~~~~~~~~~ 853 (958)
+|.+++...... ......... .... . ....+..+.. .....++++|+++++|+ +|. ++ +.....
T Consensus 108 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~-~~--~~~~~~ 184 (244)
T 2cb9_A 108 FIIVDAYKKDQSITADTENDDSAAYLPEAVRETVMQKKRCYQEYWAQLINEGRIKSNIHFIEAGIQTET-SG--AMVLQK 184 (244)
T ss_dssp EEEESCCCCCSCCCCC-------CCSCHHHHHHHTHHHHHHHHHHHHCCCCSCBSSEEEEEECSBCSCC-CH--HHHTTS
T ss_pred EEEEcCCCCcccccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCCEEEEEccCcccc-cc--ccchhH
Confidence 888876432100 000000000 0000 0 0011111110 12346688999999999 887 33 333222
Q ss_pred HHHHHHhCCCcEEEEEeCCCCcc-CCCcccHHHHHHHHHHHHHHhh
Q 002164 854 FFNALKGHGALCRLVILPFESHG-YAARESIMHVLWETDRWLQKYC 898 (958)
Q Consensus 854 ~~~~l~~~g~~~~~~~~p~~~H~-~~~~~~~~~~~~~i~~fl~~~l 898 (958)
+.+ .....+++..+|+ +|. +...+....+.+.+.+||.+..
T Consensus 185 w~~---~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 185 WQD---AAEEGYAEYTGYG-AHKDMLEGEFAEKNANIILNILDKIN 226 (244)
T ss_dssp SGG---GBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHHHHHHTC-
T ss_pred HHH---hcCCCCEEEEecC-ChHHHcChHHHHHHHHHHHHHHhcCc
Confidence 221 1123589999997 893 2234556677777888887543
No 427
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.54 E-value=4.4e-06 Score=94.22 Aligned_cols=105 Identities=7% Similarity=0.069 Sum_probs=68.6
Q ss_pred ccccccccCCC-CcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCC
Q 002164 332 AVYTSLDPSPD-EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDK 410 (958)
Q Consensus 332 ~~~~~~~~SpD-Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG 410 (958)
..+..++|+|+ ++.|+..+. ++.+.+||+.++.... ... .....+..++|+|||
T Consensus 150 ~~V~~v~~~p~~~~~las~s~-------------Dg~v~iwD~~~~~~~~-~~~-----------~~~~~v~~v~wspdg 204 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLA-------------DGSIAVLQVTETVKVC-ATL-----------PSTVAVTSVCWSPKG 204 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEET-------------TSCEEEEEESSSEEEE-EEE-----------CGGGCEEEEEECTTS
T ss_pred CceEEEEECCCCCCEEEEEEC-------------CCeEEEEEcCCCccee-ecc-----------CCCCceeEEEEcCCC
Confidence 66889999998 667776653 3489999998663321 111 011356789999999
Q ss_pred CCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee-------ccccCceeeecCCceEEEEEecc
Q 002164 411 PSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-------DLRYGGISWCDDSLALVYESWYK 477 (958)
Q Consensus 411 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-------~~~~~~~~~spDg~~l~~~~~~~ 477 (958)
+.|+.. +..+.|.+|+. .+.....+... ...+..+.|++++..++.....+
T Consensus 205 ~~lasg-------------s~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d 262 (434)
T 2oit_A 205 KQLAVG-------------KQNGTVVQYLP---TLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD 262 (434)
T ss_dssp SCEEEE-------------ETTSCEEEECT---TCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT
T ss_pred CEEEEE-------------cCCCcEEEEcc---CCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC
Confidence 998873 44567889985 43333333221 12567799999998876655443
No 428
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.54 E-value=4.5e-06 Score=90.37 Aligned_cols=231 Identities=11% Similarity=0.049 Sum_probs=129.3
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCC-ccc
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD-IYL 242 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~-~~~ 242 (958)
.|.++|..+ + ....++. ........+++||| +|+.+.. ....|+++|+++++.......+. ...
T Consensus 65 ~v~viD~~t-~--~~~~~i~---~~~~p~~i~~~~~g-~lyv~~~--------~~~~v~~iD~~t~~~~~~i~~g~~~~~ 129 (328)
T 3dsm_A 65 VIFAIDINT-F--KEVGRIT---GFTSPRYIHFLSDE-KAYVTQI--------WDYRIFIINPKTYEITGYIECPDMDME 129 (328)
T ss_dssp EEEEEETTT-C--CEEEEEE---CCSSEEEEEEEETT-EEEEEEB--------SCSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EEEEEECcc-c--EEEEEcC---CCCCCcEEEEeCCC-eEEEEEC--------CCCeEEEEECCCCeEEEEEEcCCcccc
Confidence 688888754 2 2224443 23356778899998 5544321 25689999999987653322222 000
Q ss_pred cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-
Q 002164 243 NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL- 321 (958)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~- 321 (958)
......+++ +++.|+++... ....|+++|+
T Consensus 130 ~~~p~~i~~--~~~~lyv~~~~-----------------------------------------------~~~~v~viD~~ 160 (328)
T 3dsm_A 130 SGSTEQMVQ--YGKYVYVNCWS-----------------------------------------------YQNRILKIDTE 160 (328)
T ss_dssp TCBCCCEEE--ETTEEEEEECT-----------------------------------------------TCCEEEEEETT
T ss_pred CCCcceEEE--ECCEEEEEcCC-----------------------------------------------CCCEEEEEECC
Confidence 001335666 44455554100 1245889998
Q ss_pred CCeee-ecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccC
Q 002164 322 DGTVK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKG 400 (958)
Q Consensus 322 ~g~~~-~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~ 400 (958)
+++.. .+..+.....+.++|||+ ++++....... .+.....+.|+++|.++++.......+.. ..
T Consensus 161 t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~--~~~~~~~~~v~~id~~t~~v~~~~~~~~g-----------~~ 226 (328)
T 3dsm_A 161 TDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEG--SPYGYEAPSLYRIDAETFTVEKQFKFKLG-----------DW 226 (328)
T ss_dssp TTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTT--CSSCBCCCEEEEEETTTTEEEEEEECCTT-----------CC
T ss_pred CCeEEEEEEcCCCccceEEcCCCC-EEEEECCCccC--CccccCCceEEEEECCCCeEEEEEecCCC-----------CC
Confidence 77543 343334456788999998 55554321000 00011135899999987665432222110 23
Q ss_pred cceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCce--E-EEeeccccCceeeecCCceEEEEEecc
Q 002164 401 MRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE--I-LHKLDLRYGGISWCDDSLALVYESWYK 477 (958)
Q Consensus 401 ~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~--~-l~~~~~~~~~~~~spDg~~l~~~~~~~ 477 (958)
+..++|+|||+.+++. . . .++++|. ++++.. . +.........++++|++..|+.+...+
T Consensus 227 p~~la~~~d~~~lyv~-------------~-~-~v~~~d~---~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~ 288 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWI-------------N-N-DIWRMPV---EADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAID 288 (328)
T ss_dssp CEEEEECTTSCEEEEE-------------S-S-SEEEEET---TCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTT
T ss_pred ceeEEEecCCCEEEEE-------------c-c-EEEEEEC---CCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccc
Confidence 5689999999988873 1 2 7889985 443331 1 111123345689999887877764110
Q ss_pred -ccceEEEEEcCCC
Q 002164 478 -TRRTRTWVISPGS 490 (958)
Q Consensus 478 -~~~~~l~~~~~~~ 490 (958)
.....|+++++++
T Consensus 289 y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 289 YQQQGIVYRYSPQG 302 (328)
T ss_dssp SSSEEEEEEECTTC
T ss_pred cccCCEEEEECCCC
Confidence 1125788888874
No 429
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.54 E-value=5.4e-06 Score=87.81 Aligned_cols=158 Identities=8% Similarity=-0.072 Sum_probs=78.1
Q ss_pred ccccccccCC---CCcEEEEEeecCCccccccCCCCCceeEEEeccCc-eEEEeccCCccccCcccccccccCcceeeee
Q 002164 332 AVYTSLDPSP---DEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI-FVRELCDLPLAEDIPIAFNSVRKGMRSINWR 407 (958)
Q Consensus 332 ~~~~~~~~Sp---DGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~s 407 (958)
..+...+||| ||+.|+-.+. ++.|.+||++++ ..+.+....... .....++||
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~-------------D~TIkIWDl~TGk~l~tL~g~~~~v----------~~v~~vafS 235 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTI-------------MNNIVIWNLKTGQLLKKMHIDDSYQ----------ASVCHKAYS 235 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEET-------------TSEEEEEETTTCCEEEEEECCC-------------CCCEEEEEE
T ss_pred CceeeEEeeccCCCCceEEEecC-------------CCcEEEEECCCCcEEEEEcCCCcce----------eeeEEEEEC
Confidence 3456678888 7788887774 349999999955 456654321100 234456899
Q ss_pred cCCCCceEEEEeccCCCc-ccccccCCeEEEEeCCCCCCCCceEEEe---ecccc-CceeeecCCceEEEEEeccccceE
Q 002164 408 SDKPSTLYWAETQDGGDA-KVEVTPRDIIYTQQAEPVQGEGPEILHK---LDLRY-GGISWCDDSLALVYESWYKTRRTR 482 (958)
Q Consensus 408 pDG~~l~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~g~~~~~l~~---~~~~~-~~~~~spDg~~l~~~~~~~~~~~~ 482 (958)
|||+.++..... .+.. ....+....+.+|+. .+++...... .++.. ..+..+.+|..++..+.+++
T Consensus 236 pdG~~lvs~s~~--~~~w~laSGs~D~tIklWd~---~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgT---- 306 (356)
T 2w18_A 236 EMGLLFIVLSHP--CAKESESLRSPVFQLIVINP---KTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGT---- 306 (356)
T ss_dssp ETTEEEEEEC--------------CCEEEEEEET---TTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSC----
T ss_pred CCCCEEEEeccC--CCcceeeccCCCcEEEEEEC---CCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCc----
Confidence 999987664221 0000 011233456777885 3333221110 11111 11111222444554433332
Q ss_pred EEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 483 TWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 483 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
|.++|+.++ +...........+.. .++|||||++|+...
T Consensus 307 IkIWDl~tG--k~l~tL~gH~~~vvs-----~vafSPDG~~LaSGS 345 (356)
T 2w18_A 307 IAIWDLLLG--QCTALLPPVSDQHWS-----FVKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEEEETTTC--SEEEEECCC--CCCC-----EEEECSSSSEEEEEC
T ss_pred EEEEECCCC--cEEEEecCCCCCeEE-----EEEECCCCCEEEEEE
Confidence 455566664 333333322222221 167999999998776
No 430
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.53 E-value=3e-07 Score=99.72 Aligned_cols=170 Identities=11% Similarity=0.020 Sum_probs=94.0
Q ss_pred HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHh---CCCceeE
Q 002164 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAH---APHLFCC 786 (958)
Q Consensus 710 ~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~---~p~~~~a 786 (958)
..+|.|+. .+..|+|.+............++.+.+..+. ...++.++||||||.++..+|.+ .|++++.
T Consensus 125 ~~~~~v~~---~d~~g~~~~~~~~~~~~~~a~~~~~~i~~~~-----~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~ 196 (329)
T 3tej_A 125 DPQWSIIG---IQSPRPNGPMQTAANLDEVCEAHLATLLEQQ-----PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAF 196 (329)
T ss_dssp CTTCEEEE---ECCCTTTSHHHHCSSHHHHHHHHHHHHHHHC-----SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCeEEE---eeCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccE
Confidence 46899999 4556776654333334455555544443321 12589999999999999999998 8999999
Q ss_pred EEEeccCCCCC----CCC-CCccccc--------------------chhhhc-HHHHHhc-C--cccccCCCCCCEEEEe
Q 002164 787 GIARSGAYNRT----LTP-FGFQNED--------------------RTLWEA-TSTYVEM-S--PFMSANKLKKPILLVH 837 (958)
Q Consensus 787 ~v~~~~~~~~~----~~~-~~~~~~~--------------------~~~~~~-~~~~~~~-s--p~~~~~~~~~P~Lii~ 837 (958)
++++.+..... ... ....... ...... ...+... . .......+.+|++++.
T Consensus 197 lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 276 (329)
T 3tej_A 197 LGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFV 276 (329)
T ss_dssp EEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEE
T ss_pred EEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEE
Confidence 99887653210 000 0000000 000000 0001000 0 0011335678999999
Q ss_pred eCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCcc-CCCcccHHHHHHHHHHHH
Q 002164 838 GEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESHG-YAARESIMHVLWETDRWL 894 (958)
Q Consensus 838 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H~-~~~~~~~~~~~~~i~~fl 894 (958)
|+.|..++ ......+ +..-..++++.+++ +|. +...+....+...+.+||
T Consensus 277 ~~~d~~~~--~~~~~~w----~~~~~~~~~~~v~g-~H~~~~~~~~~~~ia~~l~~~L 327 (329)
T 3tej_A 277 AERTLQEG--MSPERAW----SPWIAELDIYRQDC-AHVDIISPGTFEKIGPIIRATL 327 (329)
T ss_dssp EGGGCCTT--CCHHHHH----TTTEEEEEEEEESS-CGGGGGSTTTHHHHHHHHHHHH
T ss_pred eccCCCCC--CCchhhH----HHhcCCcEEEEecC-ChHHhCCChHHHHHHHHHHHHh
Confidence 99998776 4433333 22223588888985 786 333333344444555554
No 431
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.52 E-value=1.8e-05 Score=82.66 Aligned_cols=193 Identities=8% Similarity=-0.051 Sum_probs=113.5
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.....+++|||+ |+++. . ...|++++.+++....+....... ...++++|||+ |+++..
T Consensus 68 ~p~~i~~~~~g~-l~v~~-------~--~~~i~~~d~~~~~~~~~~~~~~~~----p~~i~~~~~g~-l~v~~~------ 126 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VYVTD-------F--NNRVVTLAAGSNNQTVLPFDGLNY----PEGLAVDTQGA-VYVADR------ 126 (270)
T ss_dssp SCCCEEECTTCC-EEEEE-------T--TTEEEEECTTCSCCEECCCCSCSS----EEEEEECTTCC-EEEEEG------
T ss_pred CcceeEECCCCC-EEEEc-------C--CCEEEEEeCCCceEeeeecCCcCC----CcceEECCCCC-EEEEEC------
Confidence 567789999998 55532 1 458999998887655443222111 45788899997 444300
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC--ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~--~~~~~~~~SpDGk~l 346 (958)
....|++++. +......... .....++++|||+ |
T Consensus 127 ------------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 163 (270)
T 1rwi_B 127 ------------------------------------------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-V 163 (270)
T ss_dssp ------------------------------------------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-E
T ss_pred ------------------------------------------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-E
Confidence 2245777766 3333222221 3567789999998 5
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
+++... .+.|++++.+++.......... ..+..+.+++|| .+++. +
T Consensus 164 ~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~------------~~p~~i~~d~~g-~l~v~-~-------- 209 (270)
T 1rwi_B 164 YVTDTD------------NNRVVKLEAESNNQVVLPFTDI------------TAPWGIAVDEAG-TVYVT-E-------- 209 (270)
T ss_dssp EEEEGG------------GTEEEEECTTTCCEEECCCSSC------------CSEEEEEECTTC-CEEEE-E--------
T ss_pred EEEECC------------CCEEEEEecCCCceEeecccCC------------CCceEEEECCCC-CEEEE-E--------
Confidence 555422 2378999988765443221110 234678999999 45442 1
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
...+.|++++. ++.....+.... .....+++++||+ |+++...+ .+|.++++..
T Consensus 210 ---~~~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~---~~v~~~~~~~ 264 (270)
T 1rwi_B 210 ---HNTNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGN---DRVVKLTSLE 264 (270)
T ss_dssp ---TTTSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGG---TEEEEECCCG
T ss_pred ---CCCCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCC-EEEEECCC---CEEEEEcCCC
Confidence 22456888884 554443332211 2356689999996 55554333 4678877665
No 432
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.52 E-value=4.8e-07 Score=100.67 Aligned_cols=87 Identities=17% Similarity=0.077 Sum_probs=67.5
Q ss_pred HHHHH-CCcEEEEcCCCCCCCCCCcccch--h----------hHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeChHHH
Q 002164 706 LLWLA-RGFAILGGPTTPIIGEGDEEAND--R----------FVEQLVACAEAAVEEVVRRG-VAHPSKIAVGGHSYGAF 771 (958)
Q Consensus 706 ~~la~-~G~~vl~~~~~~~~G~G~~~~~~--~----------~~~~~~~D~~~av~~l~~~~-~~d~~~i~l~G~S~GG~ 771 (958)
..+|+ .|+.|+. .+.+|+|++.... . ...+.++|+...++++.... .....++.++||||||.
T Consensus 62 ~~lA~~~~~~Vi~---~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~ 138 (446)
T 3n2z_B 62 WDVAEELKAMLVF---AEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGM 138 (446)
T ss_dssp HHHHHHHTEEEEE---ECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHH
T ss_pred HHHHHHhCCcEEE---EecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHH
Confidence 34554 5889999 6777899884321 1 15678999999999998752 22335899999999999
Q ss_pred HHHHHHHhCCCceeEEEEeccCCC
Q 002164 772 MTANLLAHAPHLFCCGIARSGAYN 795 (958)
Q Consensus 772 ~a~~~a~~~p~~~~a~v~~~~~~~ 795 (958)
+|++++.++|+++.++|+.+++..
T Consensus 139 lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 139 LAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHHhhhccccEEEEeccchh
Confidence 999999999999999998775543
No 433
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.52 E-value=5.4e-07 Score=96.49 Aligned_cols=106 Identities=16% Similarity=0.097 Sum_probs=73.2
Q ss_pred ceEEEEECCCCCcCcccCCcccCCC-CCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSP-NEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVE 748 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~ 748 (958)
.|.||++||....... +.. ..| ......|+++||.|++ .+.+|+|.+...........+++.++++
T Consensus 8 ~~~vVlvHG~~~~~~~------~~~~~~w----~~l~~~L~~~G~~V~~---~d~~g~g~s~~~~~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 8 RYPIILVHGLTGTDKY------AGVLEYW----YGIQEDLQQRGATVYV---ANLSGFQSDDGPNGRGEQLLAYVKTVLA 74 (320)
T ss_dssp SSCEEEECCTTCCSEE------TTTEESS----TTHHHHHHHTTCCEEE---CCCCSSCCSSSTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCccc------cchHHHH----HHHHHHHHhCCCEEEE---EcCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 5778999996422110 000 111 2356788899999999 5556777664433334555555555544
Q ss_pred HHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCC
Q 002164 749 EVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (958)
Q Consensus 749 ~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (958)
.+ +.+++.++||||||.++..++.+.|++++++|.+++..
T Consensus 75 ~~------~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 75 AT------GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp HH------CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred Hh------CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 43 34689999999999999999999999999999998754
No 434
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.51 E-value=1.6e-07 Score=95.94 Aligned_cols=183 Identities=10% Similarity=0.017 Sum_probs=97.1
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (958)
.|.|+++||..... ..| ......|. . |.|+.++ ..|+|. ...|+.+.++.
T Consensus 17 ~~~l~~~hg~~~~~-----------~~~----~~~~~~l~-~-~~v~~~d---~~g~~~----------~~~~~~~~i~~ 66 (230)
T 1jmk_C 17 EQIIFAFPPVLGYG-----------LMY----QNLSSRLP-S-YKLCAFD---FIEEED----------RLDRYADLIQK 66 (230)
T ss_dssp SEEEEEECCTTCCG-----------GGG----HHHHHHCT-T-EEEEEEC---CCCSTT----------HHHHHHHHHHH
T ss_pred CCCEEEECCCCCch-----------HHH----HHHHHhcC-C-CeEEEec---CCCHHH----------HHHHHHHHHHH
Confidence 47788999953111 011 12233343 4 9999844 445543 12344444443
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCceeEEEEeccCCCCCCCCCC---ccc----------ccchhh--
Q 002164 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFCCGIARSGAYNRTLTPFG---FQN----------EDRTLW-- 811 (958)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~~~~~~~~~~~~---~~~----------~~~~~~-- 811 (958)
+ . ...++.++|||+||.++..++.+. ++.++++|.+++........+. ... ......
T Consensus 67 ~---~--~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (230)
T 1jmk_C 67 L---Q--PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSE 141 (230)
T ss_dssp H---C--CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSH
T ss_pred h---C--CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhH
Confidence 3 1 125799999999999999998864 3578888887754321100000 000 000000
Q ss_pred ---hcH----HHHHhcCc-ccccCCCCCCEEEEeeCCCCCCCCChHHHHHHHHHHHhCCCcEEEEEeCCCCc--cCCCcc
Q 002164 812 ---EAT----STYVEMSP-FMSANKLKKPILLVHGEEDNNSGTLTMQSDRFFNALKGHGALCRLVILPFESH--GYAARE 881 (958)
Q Consensus 812 ---~~~----~~~~~~sp-~~~~~~~~~P~Lii~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~p~~~H--~~~~~~ 881 (958)
... ..+..+.. .....++++|+++++|++|..++ . ....+.+ .....++++.+|+ +| .+ ..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~-~~~~w~~---~~~~~~~~~~i~g-~H~~~~-~~~ 213 (230)
T 1jmk_C 142 AVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP--E-WLASWEE---ATTGAYRMKRGFG-THAEML-QGE 213 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC--T-TEECSGG---GBSSCEEEEECSS-CGGGTT-SHH
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc--c-ccchHHH---hcCCCeEEEEecC-ChHHHc-CcH
Confidence 000 00111100 12346788999999999999875 2 2222211 1223589999998 99 55 344
Q ss_pred cHHHHHHHHHHHHH
Q 002164 882 SIMHVLWETDRWLQ 895 (958)
Q Consensus 882 ~~~~~~~~i~~fl~ 895 (958)
+...+...+.+||.
T Consensus 214 ~~~~~~~~i~~~l~ 227 (230)
T 1jmk_C 214 TLDRNAGILLEFLN 227 (230)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHh
Confidence 44455555555553
No 435
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.49 E-value=1.3e-05 Score=85.71 Aligned_cols=246 Identities=14% Similarity=0.108 Sum_probs=127.5
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecC-CeEEEEEecCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNN-STLLVCTIPLLRGD 268 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspD-G~~l~~~~~~~~~~ 268 (958)
....++|++||+ |+++.... ...+.....|++++..+++.+.+...........+..+++++| |++++..
T Consensus 19 ~~~~~~~~~~g~-l~~~~~~~-~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~------- 89 (314)
T 1pjx_A 19 GAEGPVFDKNGD-FYIVAPEV-EVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD------- 89 (314)
T ss_dssp TCEEEEECTTSC-EEEEETTC-EETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-------
T ss_pred CccCceECCCCC-EEEEEecc-ccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-------
Confidence 356789999995 55541000 0001124579999988888766543100000011557889999 7644433
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeec-CCC------ccccccccCC
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEI-GPP------AVYTSLDPSP 341 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l-~~~------~~~~~~~~Sp 341 (958)
....|++++.+|+.+.+ ... ..+..++++|
T Consensus 90 -------------------------------------------~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~ 126 (314)
T 1pjx_A 90 -------------------------------------------MRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDY 126 (314)
T ss_dssp -------------------------------------------TTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECT
T ss_pred -------------------------------------------CCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECC
Confidence 11247788876655555 221 2356788999
Q ss_pred CCcEEEEEeecCCc---cccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeee----cCCCCce
Q 002164 342 DEKYILISSIHRPY---SFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWR----SDKPSTL 414 (958)
Q Consensus 342 DGk~l~~~~~~~~~---~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~s----pDG~~l~ 414 (958)
||+.+ ++...... ..........+.++.++.+ +..+.+.... .....+.|+ |||+.++
T Consensus 127 ~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~~i~~~~~~d~dg~~l~ 191 (314)
T 1pjx_A 127 EGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF-------------QFPNGIAVRHMNDGRPYQLI 191 (314)
T ss_dssp TSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-------------SSEEEEEEEECTTSCEEEEE
T ss_pred CCCEE-EEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-------------CCcceEEEecccCCCCCEEE
Confidence 99754 44322100 0000000112467778776 3333332100 123578899 9998766
Q ss_pred EEEEeccCCCcccccccCCeEEEEeCCCCCCCCce---EEEeec----cccCceeeecCCceEEEEEeccccceEEEEEc
Q 002164 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPE---ILHKLD----LRYGGISWCDDSLALVYESWYKTRRTRTWVIS 487 (958)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~---~l~~~~----~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~ 487 (958)
+. + ...+.|++++. ...++.. .+.... .....+++++||+ |+++...+ ..|++++
T Consensus 192 v~-~-----------~~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~---~~i~~~d 253 (314)
T 1pjx_A 192 VA-E-----------TPTKKLWSYDI--KGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGS---SHIEVFG 253 (314)
T ss_dssp EE-E-----------TTTTEEEEEEE--EETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETT---TEEEEEC
T ss_pred EE-E-----------CCCCeEEEEEC--CCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCC---CEEEEEc
Confidence 63 1 22457888874 1122211 111111 3345688999996 44443222 3688999
Q ss_pred CCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEe
Q 002164 488 PGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKI 528 (958)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 528 (958)
++++ +.............+ +.++|||++|+...
T Consensus 254 ~~~g--~~~~~~~~~~~~~~~------i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 254 PDGG--QPKMRIRCPFEKPSN------LHFKPQTKTIFVTE 286 (314)
T ss_dssp TTCB--SCSEEEECSSSCEEE------EEECTTSSEEEEEE
T ss_pred CCCC--cEeEEEeCCCCCcee------EEECCCCCEEEEEe
Confidence 8753 222222222122222 67899998776654
No 436
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.49 E-value=2.1e-06 Score=93.52 Aligned_cols=282 Identities=9% Similarity=-0.085 Sum_probs=131.4
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeecccc-CCCCCceEEEEEcCCCceeeccCCCC-cc
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAED-SSSSKLRVWVADVDTGKARPLFQSPD-IY 241 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~-~~~~~~~l~~~~~~~g~~~~lt~~~~-~~ 241 (958)
.+.++|..+ + ....++ +.+... .+.+||||++|+.+....... .+.....|.++|+.+++...-...+. .+
T Consensus 47 ~vsvID~~t-~--~v~~~i---~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGC-G--VTLGHS---LGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTT-T--EEEEEE---EECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCC-C--eEEEEE---eCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 577877643 1 122233 223333 799999999998876321110 11235679999999988754433220 00
Q ss_pred c--cccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCce--eeecCCcccccchhhh-hccCchhh-hHHHHhhcce
Q 002164 242 L--NAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKM--QSNEKRDIIQVRTFQD-LLKDEYDE-DLFDYYATTQ 315 (958)
Q Consensus 242 ~--~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~~~d-~~~~~~~~-~~~~~~~~~~ 315 (958)
+ ......+++||||++++++....... ..+ .+... +..+.. .. ....+.+. .++.....+.
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~----------v~V~~iD~~t--v~~i~v-~~~~~~~p~g~~~~~~~~~dg~ 186 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAA----------AGLSVPGASD--DQLTKS-ASCFHIHPGAAATHYLGSCPAS 186 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCE----------EEEEETTTEE--EEEEEC-SSCCCCEEEETTEEECCCCTTS
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCe----------EEEEEEchhh--ceEEEC-CCceEEccCCCeEEEEEcCCCC
Confidence 0 00134889999999999872110000 000 00000 000000 00 00000000 0000012233
Q ss_pred EEEEEc-C-----Ceeee----cCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCC
Q 002164 316 LVLVSL-D-----GTVKE----IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP 385 (958)
Q Consensus 316 l~~~~~-~-----g~~~~----l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~ 385 (958)
+..+++ + |+... ...-+ ..+..++|++.++|.+. +.++++|+.++..+.+...+
T Consensus 187 ~~~vd~~~~~~~~~~v~~~~t~~i~vg--~~P~~~~~~~~~~~vs~--------------~~V~viD~~~~~~~v~~~~~ 250 (368)
T 1mda_H 187 LAASDLAAAPAAAGIVGAQCTGAQNCS--SQAAQANYPGMLVWAVA--------------SSILQGDIPAAGATMKAAID 250 (368)
T ss_dssp CEEEECCSSCCCCEECCCCSCTTSCBC--SCCEEETTTTEEEECBS--------------SCCEEEECCSSCCEEECCCC
T ss_pred EEEEECccccccCCeEEEEeeeeeeCC--CCccccccCCEEEEEcC--------------CEEEEEECCCCcceEEEEEE
Confidence 444554 3 22110 00000 01112667777777663 37888888754433332222
Q ss_pred ccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC-ceEEEeeccccCceeee
Q 002164 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWC 464 (958)
Q Consensus 386 ~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~~~~~~~~~~s 464 (958)
..............+...+.++|||+++++......+ ... ...+.+.++|+ ...+ ...+.-+ .....+.|+
T Consensus 251 ~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~-~~~---~~~~~~~ViD~---~t~~vv~~i~vg-~~p~gi~~s 322 (368)
T 1mda_H 251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSR-SCL---AAAENTSSVTA---SVGQTSGPISNG-HDSDAIIAA 322 (368)
T ss_dssp SSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSS-CTT---SCEEEEEEEES---SSCCEEECCEEE-EEECEEEEC
T ss_pred eccccccccccccCcceeeEEcCCCCEEEEEeccccC-ccc---ccCCCEEEEEC---CCCeEEEEEECC-CCcceEEEC
Confidence 1100000000001223347899999998874321000 000 00123558885 3333 3333322 246779999
Q ss_pred cCCceEEEEEeccccceEEEEEcCCCC
Q 002164 465 DDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 465 pDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
|||++++++.+... ..|.++|+.+.
T Consensus 323 ~Dg~~l~va~~~~~--~~VsVID~~t~ 347 (368)
T 1mda_H 323 QDGASDNYANSAGT--EVLDIYDAASD 347 (368)
T ss_dssp CSSSCEEEEEETTT--TEEEEEESSSC
T ss_pred CCCCEEEEEccCCC--CeEEEEECCCC
Confidence 99999999876222 36999998885
No 437
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.48 E-value=3.4e-05 Score=86.03 Aligned_cols=200 Identities=11% Similarity=0.003 Sum_probs=121.9
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
....++|+|||+ |+++. .....|++++++++....+...... .. ++|+|+|+.|+++..
T Consensus 132 ~P~~la~d~~g~-lyv~d--------~~~~~I~~id~~~g~~~~~~~~~~~-----~~-ia~~~~g~~l~~~d~------ 190 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAYQ--------RDDPRVRLISVDDNKVTTVHPGFKG-----GK-PAVTKDKQRVYSIGW------ 190 (409)
T ss_dssp CEEEEEECSTTE-EEEEE--------TTTTEEEEEETTTTEEEEEEETCCB-----CB-CEECTTSSEEEEEBS------
T ss_pred CceEEEEeCCCC-EEEEe--------cCCCcEEEEECCCCEEEEeeccCCC-----Cc-eeEecCCCcEEEEec------
Confidence 456678999997 55542 1356899999998887766543322 33 899999998887610
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeec----C-CCccccccccCCC
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEI----G-PPAVYTSLDPSPD 342 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l----~-~~~~~~~~~~SpD 342 (958)
. ....|++++. ++. .+.+ . .......++++|+
T Consensus 191 ---------------~--------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 191 ---------------E--------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp ---------------S--------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT
T ss_pred ---------------C--------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC
Confidence 0 1125888887 443 2333 2 2255678899997
Q ss_pred CcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcc-eeeeecCCCCceEEEEecc
Q 002164 343 EKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMR-SINWRSDKPSTLYWAETQD 421 (958)
Q Consensus 343 Gk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~spDG~~l~~~~~~~~ 421 (958)
+.+|++.. . .+.|+.++.+++....+........ ....+. .++|+|++..|++. +
T Consensus 230 ~g~lyv~d-~------------~~~I~~~d~~~~~~~~~~~~~~~g~-------~~~~P~~~ia~~p~~g~lyv~-d--- 285 (409)
T 3hrp_A 230 EEWLYFVD-S------------NKNFGRFNVKTQEVTLIKQLELSGS-------LGTNPGPYLIYYFVDSNFYMS-D--- 285 (409)
T ss_dssp SSEEEEEC-T------------TCEEEEEETTTCCEEEEEECCCCSC-------CCCSSCCEEEEETTTTEEEEE-E---
T ss_pred CCeEEEEE-C------------CCcEEEEECCCCCEEEEecccccCC-------CCCCccccEEEeCCCCEEEEE-e---
Confidence 77777743 2 2479999998766544422111000 001223 89999987777663 1
Q ss_pred CCCcccccccCCeEEEEeCCCCCCCCceEEEeec---------------cccCceeeecCCceEEEEEec-cccceEEEE
Q 002164 422 GGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---------------LRYGGISWCDDSLALVYESWY-KTRRTRTWV 485 (958)
Q Consensus 422 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~---------------~~~~~~~~spDg~~l~~~~~~-~~~~~~l~~ 485 (958)
...+.|++++. ++. ...+.... .....+++++||+ |+++ +. .+ .+|++
T Consensus 286 --------~~~~~I~~~~~---~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyva-d~~~~--~~I~~ 349 (409)
T 3hrp_A 286 --------QNLSSVYKITP---DGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIV-DGFKG--YCLRK 349 (409)
T ss_dssp --------TTTTEEEEECT---TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEE-ETTTT--CEEEE
T ss_pred --------CCCCEEEEEec---CCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEE-eCCCC--CEEEE
Confidence 23557888874 443 33332211 1134589999998 5555 33 33 57999
Q ss_pred EcCCCC
Q 002164 486 ISPGSK 491 (958)
Q Consensus 486 ~~~~~~ 491 (958)
+++.++
T Consensus 350 ~~~~~G 355 (409)
T 3hrp_A 350 LDILDG 355 (409)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 986553
No 438
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.48 E-value=4.1e-05 Score=84.63 Aligned_cols=187 Identities=11% Similarity=0.039 Sum_probs=121.2
Q ss_pred ceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCc
Q 002164 314 TQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIP 391 (958)
Q Consensus 314 ~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p 391 (958)
..|+++++ ++....+... .....++|+++++.|+++... .+.|+.++++++..+.+.....
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~----- 158 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGL----- 158 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCCEEEEECSSC-----
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCC------------CCcEEEEecCCCCcEEEEeCCC-----
Confidence 45888888 5555555544 567788999988889888633 3489999999876655433211
Q ss_pred ccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeecCCceE
Q 002164 392 IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLAL 470 (958)
Q Consensus 392 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~~l 470 (958)
..+..+++++.+..|++. + ...+.|++++. +|...+.+.... .....+++.|++..|
T Consensus 159 -------~~p~glavd~~~g~lY~~-d-----------~~~~~I~~~~~---dg~~~~~l~~~~l~~P~giavdp~~g~l 216 (386)
T 3v65_B 159 -------ESPGGLAVDWVHDKLYWT-D-----------SGTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEGTI 216 (386)
T ss_dssp -------SCCCCEEEETTTTEEEEE-E-----------TTTTEEEECBT---TSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred -------CCccEEEEEeCCCeEEEE-c-----------CCCCeEEEEeC---CCCceEEeecCCCCCCcEEEEEcCCCeE
Confidence 234578888888777663 2 23457888874 666655554332 334568899999999
Q ss_pred EEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCC
Q 002164 471 VYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGN 550 (958)
Q Consensus 471 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (958)
+++.+... .+|+++++++. ....+.........+ ++++|+++.|++... .
T Consensus 217 y~td~~~~--~~I~r~~~dG~--~~~~~~~~~~~~PnG------lavd~~~~~lY~aD~--------------------~ 266 (386)
T 3v65_B 217 YWTDWGNT--PRIEASSMDGS--GRRIIADTHLFWPNG------LTIDYAGRRMYWVDA--------------------K 266 (386)
T ss_dssp EEEECSSS--CEEEEEETTSC--SCEEEECSSCSCEEE------EEEEGGGTEEEEEET--------------------T
T ss_pred EEeccCCC--CEEEEEeCCCC--CcEEEEECCCCCeee------EEEeCCCCEEEEEEC--------------------C
Confidence 88865442 57999999884 333333222111112 778988888888752 1
Q ss_pred CCeEEEEECCCCceEEEec
Q 002164 551 IPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 551 ~~~L~~~dl~~g~~~~l~~ 569 (958)
...|+++|+++...+.+..
T Consensus 267 ~~~I~~~d~dG~~~~~~~~ 285 (386)
T 3v65_B 267 HHVIERANLDGSHRKAVIS 285 (386)
T ss_dssp TTEEEEECTTSCSCEEEEC
T ss_pred CCEEEEEeCCCCeeEEEEE
Confidence 2369999988765555543
No 439
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.47 E-value=2e-05 Score=82.21 Aligned_cols=195 Identities=10% Similarity=-0.025 Sum_probs=108.0
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
....++++|||+ |+++.+ .....|++++..++....+....... ...+++++||+ |+++.
T Consensus 25 ~p~~i~~~~~g~-l~v~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~----p~~i~~~~~g~-l~v~~------- 84 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSE-------GMYGRVVKLATGSTGTTVLPFNGLYQ----PQGLAVDGAGT-VYVTD------- 84 (270)
T ss_dssp CEEEEEECTTCC-EEEEEC-------SSSCEEEEECC-----EECCCCSCCS----CCCEEECTTCC-EEEEE-------
T ss_pred CccceEECCCCC-EEEEcc-------CCCCcEEEecCCCcccceEeeCCcCC----cceeEECCCCC-EEEEc-------
Confidence 356678999997 544131 23568999987776554432222111 45788999998 44441
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC--ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP--AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~--~~~~~~~~SpDGk~l 346 (958)
....|++++. ++....+... .....++++|||+ |
T Consensus 85 ------------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 121 (270)
T 1rwi_B 85 ------------------------------------------FNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-V 121 (270)
T ss_dssp ------------------------------------------TTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-E
T ss_pred ------------------------------------------CCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-E
Confidence 1134788887 4444433322 4566788999997 5
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
+++... .+.|++++..+.......... ...+..+.+++||+ +++. +
T Consensus 122 ~v~~~~------------~~~i~~~~~~~~~~~~~~~~~------------~~~p~~i~~~~~g~-l~v~-~-------- 167 (270)
T 1rwi_B 122 YVADRG------------NNRVVKLAAGSKTQTVLPFTG------------LNDPDGVAVDNSGN-VYVT-D-------- 167 (270)
T ss_dssp EEEEGG------------GTEEEEECTTCCSCEECCCCS------------CCSCCCEEECTTCC-EEEE-E--------
T ss_pred EEEECC------------CCEEEEEECCCceeEeecccc------------CCCceeEEEeCCCC-EEEE-E--------
Confidence 544322 236778865433222111100 02346789999997 4442 2
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
...+.|++++. ++.......... .....++++++| .|+++...+ ..|++++.++.
T Consensus 168 ---~~~~~i~~~~~---~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~---~~v~~~~~~~~ 223 (270)
T 1rwi_B 168 ---TDNNRVVKLEA---ESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNT---NQVVKLLAGST 223 (270)
T ss_dssp ---GGGTEEEEECT---TTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTT---SCEEEECTTCS
T ss_pred ---CCCCEEEEEec---CCCceEeecccCCCCceEEEECCCC-CEEEEECCC---CcEEEEcCCCC
Confidence 22457888884 444433222111 334568899999 555554332 35888988764
No 440
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.47 E-value=8.7e-06 Score=88.13 Aligned_cols=121 Identities=16% Similarity=0.163 Sum_probs=66.0
Q ss_pred ccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc-CceEEEeccCCccccCcccccccccCcceeeeecCCCC
Q 002164 334 YTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPS 412 (958)
Q Consensus 334 ~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~-~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~ 412 (958)
...++++||+..|+++... .+.|.+|+.+ ++..+.+...... ..+..+.|+| .
T Consensus 198 p~gia~d~~~g~l~v~d~~------------~~~I~~~~~~~G~~~~~~~~~~~~-----------~~~~~~~~~p---g 251 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE------------NGRIQCFKTDTKEFVREIKHASFG-----------RNVFAISYIP---G 251 (329)
T ss_dssp EEEEEEETTTTEEEEEETT------------TTEEEEEETTTCCEEEEECCTTTT-----------TCEEEEEEET---T
T ss_pred CcEEEEECCCCEEEEEECC------------CCEEEEEECCCCcEEEEEeccccC-----------CCcceeeecC---C
Confidence 5678999997777777533 3489999998 5555554322111 2345677888 2
Q ss_pred ceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEE---eeccccCceeeecCCceEEEEEeccccceEEEEEcCC
Q 002164 413 TLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILH---KLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPG 489 (958)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~---~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~ 489 (958)
+++..+ +... +.......+++++. .+|+....+. ........++++||| .|+.+.. .. .+|++++++
T Consensus 252 ~~~~~~---g~~~-v~~~~~~~v~~~~~--~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~-~~--~~I~~~~~~ 321 (329)
T 3fvz_A 252 FLFAVN---GKPY-FGDQEPVQGFVMNF--SSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDA-HT--NTVWKFTLT 321 (329)
T ss_dssp EEEEEE---CCCC-TTCSCCCCEEEEET--TTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEES-SS--CCEEEEEEE
T ss_pred EEEEeC---CCEE-eccCCCcEEEEEEc--CCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEEC-CC--CEEEEEeCC
Confidence 333322 1111 11123456888885 2333333321 112234568999999 5555433 32 346666654
Q ss_pred C
Q 002164 490 S 490 (958)
Q Consensus 490 ~ 490 (958)
+
T Consensus 322 ~ 322 (329)
T 3fvz_A 322 E 322 (329)
T ss_dssp E
T ss_pred c
Confidence 4
No 441
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.46 E-value=9.4e-07 Score=92.89 Aligned_cols=82 Identities=12% Similarity=-0.066 Sum_probs=61.2
Q ss_pred HHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---
Q 002164 704 SVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA--- 780 (958)
Q Consensus 704 ~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~--- 780 (958)
....|+++||.|+.++ ..|+|.+. .....+++.+.++++.+.- ..+++.|+||||||.++.+++.+.
T Consensus 86 l~~~L~~~Gy~V~a~D---lpG~G~~~-----~~~~~~~la~~I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~ 155 (316)
T 3icv_A 86 WIPLSAQLGYTPCWIS---PPPFMLND-----TQVNTEYMVNAITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSI 155 (316)
T ss_dssp HHHHHHHTTCEEEEEC---CTTTTCSC-----HHHHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHCCCeEEEec---CCCCCCCc-----HHHHHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhcccc
Confidence 4567888999999944 45666432 2334566777788777653 236899999999999998877764
Q ss_pred CCceeEEEEeccCCC
Q 002164 781 PHLFCCGIARSGAYN 795 (958)
Q Consensus 781 p~~~~a~v~~~~~~~ 795 (958)
+++++.+|++++.+.
T Consensus 156 ~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 156 RSKVDRLMAFAPDYK 170 (316)
T ss_dssp TTTEEEEEEESCCTT
T ss_pred chhhceEEEECCCCC
Confidence 589999999998765
No 442
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.46 E-value=2.8e-05 Score=86.01 Aligned_cols=180 Identities=11% Similarity=0.052 Sum_probs=119.1
Q ss_pred CceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhh
Q 002164 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (958)
Q Consensus 218 ~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (958)
...|+++++++++...+...... ...++|.+++..|+++- .
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~-----~~gl~~d~~~~~ly~~D---------------------~------------- 135 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSD---------------------V------------- 135 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSC-----EEEEEEETTTTEEEEEE---------------------T-------------
T ss_pred CccceeeccCCCcEEEEecCCCc-----cEEEEEecCCCeEEEEe---------------------C-------------
Confidence 45799999988776666543332 55899998777788761 0
Q ss_pred hccCchhhhHHHHhhcceEEEEEc-CCeeeec-CCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc
Q 002164 298 LLKDEYDEDLFDYYATTQLVLVSL-DGTVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (958)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l-~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~ 374 (958)
....|+++++ ++..+.+ ... .....+++++.++.|+++... ...|++++++
T Consensus 136 --------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~------------~~~I~~~~~d 189 (386)
T 3v65_B 136 --------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG------------TSRIEVANLD 189 (386)
T ss_dssp --------------TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT------------TTEEEECBTT
T ss_pred --------------CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC------------CCeEEEEeCC
Confidence 2346889998 4444443 333 445677888888888888633 2378888888
Q ss_pred CceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee
Q 002164 375 GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL 454 (958)
Q Consensus 375 ~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~ 454 (958)
++..+.+..... ..+..++++|++..|++. +. .....|++++. +|...+.+...
T Consensus 190 g~~~~~l~~~~l------------~~P~giavdp~~g~ly~t-d~----------~~~~~I~r~~~---dG~~~~~~~~~ 243 (386)
T 3v65_B 190 GAHRKVLLWQSL------------EKPRAIALHPMEGTIYWT-DW----------GNTPRIEASSM---DGSGRRIIADT 243 (386)
T ss_dssp SCSCEEEECSSC------------SCEEEEEEETTTTEEEEE-EC----------SSSCEEEEEET---TSCSCEEEECS
T ss_pred CCceEEeecCCC------------CCCcEEEEEcCCCeEEEe-cc----------CCCCEEEEEeC---CCCCcEEEEEC
Confidence 766555433111 234678999988776653 22 12357999985 77666666433
Q ss_pred cc-ccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 455 DL-RYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 455 ~~-~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
.. ...+++|+|+++.|+++.... .+|+++++++.
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD~~~---~~I~~~d~dG~ 278 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGS 278 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEETTT---TEEEEECTTSC
T ss_pred CCCCeeeEEEeCCCCEEEEEECCC---CEEEEEeCCCC
Confidence 22 345799999999998885333 57999999874
No 443
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.45 E-value=3.9e-07 Score=102.44 Aligned_cols=108 Identities=11% Similarity=-0.127 Sum_probs=77.5
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~a 746 (958)
.|+||++||++.. ....+.......|++ .||.|++ .|.+|+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~~-------------~~~~w~~~l~~~l~~~~~~~Vi~---~D~~G~G~S~~~~~~~~~~~~~~dl~~l 133 (452)
T 1bu8_A 70 RKTRFIVHGFIDK-------------GEDGWLLDMCKKMFQVEKVNCIC---VDWRRGSRTEYTQASYNTRVVGAEIAFL 133 (452)
T ss_dssp SEEEEEECCSCCT-------------TCTTHHHHHHHHHHTTCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-------------CCchHHHHHHHHHHhhCCCEEEE---EechhcccCchhHhHhhHHHHHHHHHHH
Confidence 6899999996421 101111113445665 4999999 556677766422 11224557788899
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
+++|.++..++.+++.|+|||+||.+|+.++.+.|+++++++..+|.
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1bu8_A 134 VQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPA 180 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCC
Confidence 99987654456789999999999999999999999999999998775
No 444
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.43 E-value=3.5e-05 Score=83.27 Aligned_cols=235 Identities=6% Similarity=-0.020 Sum_probs=122.6
Q ss_pred ceEEEEEc-CCeeeecCC-C--ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCc--eEEEeccCCcc
Q 002164 314 TQLVLVSL-DGTVKEIGP-P--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI--FVRELCDLPLA 387 (958)
Q Consensus 314 ~~l~~~~~-~g~~~~l~~-~--~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~--~~~~l~~~~~~ 387 (958)
..|++++. +|+...... . .....++++|||+ |+++... .+.|++|+.+++ ....+......
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~------------~~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVA------------LHQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEETT------------TTEEEEECTTCSSCCSEEESBTTBC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEECC------------CCEEEEEeCCCCeEEEEEecccCCC
Confidence 56999998 786554332 2 3566789999999 5555422 348999998876 33433221000
Q ss_pred ccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec----------cc
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD----------LR 457 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~----------~~ 457 (958)
. ........+..++++|++..|++. +. .....|++++. +|.....+.... ..
T Consensus 136 g----~~~~~~~~P~~ia~~~~~g~lyv~-d~----------~~~~~I~~~~~---~g~~~~~~~~~g~~~~~~~~~~~~ 197 (329)
T 3fvz_A 136 G----SDQNHFCQPTDVAVEPSTGAVFVS-DG----------YCNSRIVQFSP---SGKFVTQWGEESSGSSPRPGQFSV 197 (329)
T ss_dssp C----CSTTCCSSEEEEEECTTTCCEEEE-EC----------SSCCEEEEECT---TSCEEEEECEECCSSSCCTTEESC
T ss_pred C----CCccccCCCcEEEEeCCCCeEEEE-eC----------CCCCeEEEEcC---CCCEEEEeccCCCCCCCCCcccCC
Confidence 0 000111245689999954455552 10 13557888874 554444442111 11
Q ss_pred cCceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEecc--CCccccCCCCCCceEeccCCceEEEEeeeccCCC
Q 002164 458 YGGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDR--SSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEG 535 (958)
Q Consensus 458 ~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~ 535 (958)
...++++|++..|+++...+ .+|.+++++++ +....... .....+. +.++| |. ++....
T Consensus 198 p~gia~d~~~g~l~v~d~~~---~~I~~~~~~~G--~~~~~~~~~~~~~~~~~------~~~~p-g~--~~~~~g----- 258 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADREN---GRIQCFKTDTK--EFVREIKHASFGRNVFA------ISYIP-GF--LFAVNG----- 258 (329)
T ss_dssp EEEEEEETTTTEEEEEETTT---TEEEEEETTTC--CEEEEECCTTTTTCEEE------EEEET-TE--EEEEEC-----
T ss_pred CcEEEEECCCCEEEEEECCC---CEEEEEECCCC--cEEEEEeccccCCCcce------eeecC-CE--EEEeCC-----
Confidence 45689999966776664333 46888888743 22222211 1111121 56777 42 222211
Q ss_pred cEEEEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEE
Q 002164 536 TYILLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQS 615 (958)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d 615 (958)
.+++. ......+++||+.+|+....+..... -...+. ..++++|| .+++..... ..|++++
T Consensus 259 -~~~v~------~~~~~~v~~~~~~~g~~~~~~~~~~~-~~~~p~-------~ia~~~dG-~lyvad~~~---~~I~~~~ 319 (329)
T 3fvz_A 259 -KPYFG------DQEPVQGFVMNFSSGEIIDVFKPVRK-HFDMPH-------DIVASEDG-TVYIGDAHT---NTVWKFT 319 (329)
T ss_dssp -CCCTT------CSCCCCEEEEETTTCCEEEEECCSSS-CCSSEE-------EEEECTTS-EEEEEESSS---CCEEEEE
T ss_pred -CEEec------cCCCcEEEEEEcCCCeEEEEEcCCCC-ccCCee-------EEEECCCC-CEEEEECCC---CEEEEEe
Confidence 01111 11234699999988887766542211 011111 24678888 454443322 2466666
Q ss_pred CC
Q 002164 616 WP 617 (958)
Q Consensus 616 ~~ 617 (958)
+.
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 445
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.42 E-value=4.4e-05 Score=80.50 Aligned_cols=193 Identities=13% Similarity=0.105 Sum_probs=107.4
Q ss_pred cccceee-cCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002164 190 KLNFVTW-SQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 190 ~~~~~~w-SPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
.....++ .++| .|+++.. .....|++++.++...+.+....... ...++++|||++++...
T Consensus 78 ~p~~i~~~~~~g-~l~v~~~-------~~~~~i~~~d~~g~~~~~~~~~~~~~----~~~i~~~~~g~l~v~~~------ 139 (286)
T 1q7f_A 78 YPNRVAVVRNSG-DIIVTER-------SPTHQIQIYNQYGQFVRKFGATILQH----PRGVTVDNKGRIIVVEC------ 139 (286)
T ss_dssp SEEEEEEETTTT-EEEEEEC-------GGGCEEEEECTTSCEEEEECTTTCSC----EEEEEECTTSCEEEEET------
T ss_pred CceEEEEEcCCC-eEEEEcC-------CCCCEEEEECCCCcEEEEecCccCCC----ceEEEEeCCCCEEEEEC------
Confidence 3456677 4566 4555431 12457899996554444332211111 45788999997444220
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCe-eeecCC--C-ccccccccCCCCc
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIGP--P-AVYTSLDPSPDEK 344 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~l~~--~-~~~~~~~~SpDGk 344 (958)
....|++++.+|+ ...+.. . .....++++|||+
T Consensus 140 -------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 140 -------------------------------------------KVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp -------------------------------------------TTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred -------------------------------------------CCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC
Confidence 1235777777443 333321 2 4467889999998
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
|+++... .+.|++|+.+++....+.... . ...+..+++++||+ +++. +
T Consensus 177 -l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g-~----------~~~p~~i~~d~~G~-l~v~-~------ 224 (286)
T 1q7f_A 177 -IFISDNR------------AHCVKVFNYEGQYLRQIGGEG-I----------TNYPIGVGINSNGE-ILIA-D------ 224 (286)
T ss_dssp -EEEEEGG------------GTEEEEEETTCCEEEEESCTT-T----------SCSEEEEEECTTCC-EEEE-E------
T ss_pred -EEEEECC------------CCEEEEEcCCCCEEEEEccCC-c----------cCCCcEEEECCCCC-EEEE-e------
Confidence 4444322 238999998877655543211 0 02346789999995 3332 1
Q ss_pred cccccccCC-eEEEEeCCCCCCCCceEEEeecc--ccCceeeecCCceEEEEEeccccceEEEEE
Q 002164 425 AKVEVTPRD-IIYTQQAEPVQGEGPEILHKLDL--RYGGISWCDDSLALVYESWYKTRRTRTWVI 486 (958)
Q Consensus 425 ~~~~~~~~~-~l~~~~~~~~~g~~~~~l~~~~~--~~~~~~~spDg~~l~~~~~~~~~~~~l~~~ 486 (958)
...+ .|.+++. ++.....+..... ....++++|||+ |+++ +.+ +...+|.+
T Consensus 225 -----~~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~-~~v~v~~~ 278 (286)
T 1q7f_A 225 -----NHNNFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDDGS-VVLA-SKD-YRLYIYRY 278 (286)
T ss_dssp -----CSSSCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETT-TEEEEEEC
T ss_pred -----CCCCEEEEEECC---CCCEEEEEcccCCCCcceeEEECCCCc-EEEE-CCC-CeEEEEEc
Confidence 2233 7888884 5554555533222 234689999996 5544 333 22445543
No 446
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.41 E-value=0.00011 Score=78.66 Aligned_cols=187 Identities=10% Similarity=0.030 Sum_probs=115.6
Q ss_pred ceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC----ceEEEeccCCcc
Q 002164 314 TQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLPLA 387 (958)
Q Consensus 314 ~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~----~~~~~l~~~~~~ 387 (958)
..|.++++ +++...+... .....++|+++++.|+++... .+.|+.+++++ +..+.+....
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~------------~~~I~~~~~~g~~~~~~~~~~~~~~-- 75 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD-- 75 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECSS--
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC------------CCcEEEEECCCCCCCcccEEEEeCC--
Confidence 45889999 5555444433 566788999999999888633 34888898886 3323322110
Q ss_pred ccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee-ccccCceeeecC
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDD 466 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~spD 466 (958)
...+..+++++.+..|++. + ...+.|.+++. +|...+.+... ......++..|+
T Consensus 76 ----------~~~p~glavd~~~~~ly~~-d-----------~~~~~I~~~~~---~g~~~~~~~~~~~~~P~~iavdp~ 130 (316)
T 1ijq_A 76 ----------IQAPDGLAVDWIHSNIYWT-D-----------SVLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDPV 130 (316)
T ss_dssp ----------CSCCCEEEEETTTTEEEEE-E-----------TTTTEEEEEET---TSSSEEEEEECTTCCEEEEEEETT
T ss_pred ----------CCCcCEEEEeecCCeEEEE-E-----------CCCCEEEEEeC---CCCceEEEEECCCCCcceEEeCCC
Confidence 0234678888877776663 2 23457888885 66665555432 234456889998
Q ss_pred CceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCC
Q 002164 467 SLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (958)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (958)
+..|+++.+.. ..+|+++++++. ....+.........+ ++++++++.|++...
T Consensus 131 ~g~ly~~d~~~--~~~I~~~~~dG~--~~~~~~~~~~~~P~g------la~d~~~~~lY~~D~----------------- 183 (316)
T 1ijq_A 131 HGFMYWTDWGT--PAKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS----------------- 183 (316)
T ss_dssp TTEEEEEECSS--SCEEEEEETTSC--CEEEEECSSCSCEEE------EEEETTTTEEEEEET-----------------
T ss_pred CCEEEEEccCC--CCeEEEEcCCCC--CeEEEEECCCCCceE------EEEeccCCEEEEEEC-----------------
Confidence 88888876432 257999999874 222332221111111 778999888888752
Q ss_pred CCCCCCeEEEEECCCCceEEEec
Q 002164 547 PEGNIPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 547 ~~~~~~~L~~~dl~~g~~~~l~~ 569 (958)
....|+++|+++...+.+..
T Consensus 184 ---~~~~I~~~d~dg~~~~~~~~ 203 (316)
T 1ijq_A 184 ---KLHSISSIDVNGGNRKTILE 203 (316)
T ss_dssp ---TTTEEEEEETTSCSCEEEEE
T ss_pred ---CCCeEEEEecCCCceEEEee
Confidence 12369999998766555543
No 447
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.41 E-value=5.5e-07 Score=101.17 Aligned_cols=108 Identities=11% Similarity=-0.039 Sum_probs=76.7
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHC-CcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLAR-GFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-G~~vl~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~a 746 (958)
.|+||++||.... ....+.......|+++ ||.|++ .|.+|+|.+.... .......+|+.+.
T Consensus 70 ~p~vvliHG~~~~-------------~~~~w~~~~~~~l~~~~~~~Vi~---~D~~g~G~S~~~~~~~~~~~~~~dl~~~ 133 (452)
T 1w52_X 70 RKTHFVIHGFRDR-------------GEDSWPSDMCKKILQVETTNCIS---VDWSSGAKAEYTQAVQNIRIVGAETAYL 133 (452)
T ss_dssp SCEEEEECCTTCC-------------SSSSHHHHHHHHHHTTSCCEEEE---EECHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCC-------------CCchHHHHHHHHHHhhCCCEEEE---EecccccccccHHHHHhHHHHHHHHHHH
Confidence 5889999996421 1011112234456654 999999 5556777664221 1224456788888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
+++|.++..++.+++.|+|||+||.+|+.++.+.|+++++++..+|.
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa 180 (452)
T 1w52_X 134 IQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPA 180 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccc
Confidence 99887653345689999999999999999999999999999998775
No 448
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.39 E-value=3.2e-05 Score=87.63 Aligned_cols=211 Identities=11% Similarity=0.051 Sum_probs=112.5
Q ss_pred cccceeecC-----CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEE-e-cCCeEEEEEe
Q 002164 190 KLNFVTWSQ-----DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW-V-NNSTLLVCTI 262 (958)
Q Consensus 190 ~~~~~~wSP-----DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~w-s-pDG~~l~~~~ 262 (958)
...+|..|. ||++|+. .+ ..+..|.++|+++.+..+++..+... ....+++ + ||++++++..
T Consensus 86 d~hh~~~s~t~g~~DG~~lfV-nd-------~~~~rVavIdl~t~~~~~ii~ip~g~---~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 86 DLHHVHMSFTEGKYDGRFLFM-ND-------KANTRVARVRCDVMKCDAILEIPNAK---GIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp CBCCEEEEEETTEEEEEEEEE-EE-------TTTTEEEEEETTTTEEEEEEECSSCC---SEEEEEECCSSBCSEEEEEE
T ss_pred CCCccccCCCCCCcCCCEEEE-Ec-------CCCCEEEEEECCCceEeeEEeCCCCC---CCcceeeeecCCCcEEEEec
Confidence 345588887 9987766 32 34778999999999877755544321 1456676 5 9999998762
Q ss_pred cCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCCCccccccccC
Q 002164 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPPAVYTSLDPS 340 (958)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~~~~~~~~~~S 340 (958)
.. ... ..++++.+.. .++ ....+..+|. +.+ ..++.-++.....+.|
T Consensus 155 ~~-~~p-------------~~~dg~~l~~--------~~~---------~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~s 203 (595)
T 1fwx_A 155 ED-ETP-------------LVNDGTNMED--------VAN---------YVNVFTAVDADKWEVAWQVLVSGNLDNCDAD 203 (595)
T ss_dssp CS-CEE-------------SSCSSSSTTC--------GGG---------EEEEEEEEETTTTEEEEEEEESSCCCCEEEC
T ss_pred cc-ccc-------------cCCCCccccc--------ccc---------cCceEEEEECCCCeEEEEEEeCCCccceEEC
Confidence 10 000 0011111000 011 2345777887 553 2333322345677899
Q ss_pred CCCcEEEEEeecCCcccccc--CCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEE
Q 002164 341 PDEKYILISSIHRPYSFIVP--CGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAE 418 (958)
Q Consensus 341 pDGk~l~~~~~~~~~~~~~~--~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~ 418 (958)
|||+++++++.......... .......+.+.+.. +...+.+||+...+
T Consensus 204 pdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~---------------------------~~~~~v~~Gk~~~i--- 253 (595)
T 1fwx_A 204 YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA---------------------------EIEKAIAAGDYQEL--- 253 (595)
T ss_dssp SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH---------------------------HHHHHHHHTCSEEE---
T ss_pred CCCCEEEEEecCcccCcchhhccccccceEEEeecc---------------------------ceeEeccCCCeeEE---
Confidence 99999999884432100000 00000112222211 12235667775433
Q ss_pred eccCCCcccccccCCeEEEEeCCCCCCCC-ceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 419 TQDGGDAKVEVTPRDIIYTQQAEPVQGEG-PEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
+.+-++|.....+.. ...+... .....+.+||||++++.+.... ..+.++|.++
T Consensus 254 --------------~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s---~~VsVid~~~ 308 (595)
T 1fwx_A 254 --------------NGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLS---PTVTVLDVTR 308 (595)
T ss_dssp --------------TTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTS---SBEEEEEGGG
T ss_pred --------------CcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCC---CeEEEEECcc
Confidence 237788851101223 2344332 3455789999999987764333 3577777664
No 449
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.39 E-value=5.8e-05 Score=82.16 Aligned_cols=180 Identities=10% Similarity=0.040 Sum_probs=118.2
Q ss_pred CceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhh
Q 002164 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (958)
Q Consensus 218 ~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (958)
...|+++++++.....+...... ...++|.+.+..|+++- .
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~-----~~~l~~d~~~~~ly~~D---------------------~------------- 92 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSD---------------------V------------- 92 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSC-----EEEEEEETTTTEEEEEE---------------------T-------------
T ss_pred ccceEEEeCCCCeeEEeecCCCc-----eEEEEEeccccEEEEEe---------------------c-------------
Confidence 44689999988776665433322 45789998877888761 0
Q ss_pred hccCchhhhHHHHhhcceEEEEEc-CCeeeec-CCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc
Q 002164 298 LLKDEYDEDLFDYYATTQLVLVSL-DGTVKEI-GPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD 374 (958)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l-~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~ 374 (958)
....|+++++ ++..+.+ ... .....+++.+.++.|+++... .+.|++.+++
T Consensus 93 --------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~------------~~~I~~~~~d 146 (349)
T 3v64_C 93 --------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG------------TSRIEVANLD 146 (349)
T ss_dssp --------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETT
T ss_pred --------------cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC------------CCeEEEEcCC
Confidence 2346889998 4444443 222 445677888888888888633 2489999998
Q ss_pred CceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee
Q 002164 375 GIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL 454 (958)
Q Consensus 375 ~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~ 454 (958)
|+..+.+..... ..+..++++|++..|++. +. .....|++++. +|...+.+...
T Consensus 147 G~~~~~l~~~~l------------~~P~~iavdp~~g~ly~t-d~----------~~~~~I~r~~~---dG~~~~~~~~~ 200 (349)
T 3v64_C 147 GAHRKVLLWQSL------------EKPRAIALHPMEGTIYWT-DW----------GNTPRIEASSM---DGSGRRIIADT 200 (349)
T ss_dssp SCSCEEEECTTC------------SCEEEEEEETTTTEEEEE-EC----------SSSCEEEEEET---TSCSCEESCCS
T ss_pred CCceEEEEeCCC------------CCcceEEEecCcCeEEEe-cc----------CCCCEEEEEeC---CCCCcEEEEEC
Confidence 876555432111 234678999988776653 32 12367999985 67665555332
Q ss_pred -ccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 455 -DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 455 -~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
-....+++++|+++.|+++.... .+|+++++++.
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~~~---~~I~~~~~dG~ 235 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDAKH---HVIERANLDGS 235 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred CCCCcceEEEeCCCCEEEEEECCC---CEEEEEeCCCC
Confidence 22345789999999998885433 57999998874
No 450
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.39 E-value=0.00011 Score=80.00 Aligned_cols=187 Identities=11% Similarity=0.039 Sum_probs=119.9
Q ss_pred ceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCc
Q 002164 314 TQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIP 391 (958)
Q Consensus 314 ~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p 391 (958)
..|+++++ +.....+... .....++|+++++.|+++... .+.|+.++++++..+.+.....
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~----- 115 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGL----- 115 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC-----
T ss_pred cceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEecc------------CCceEEEecCCCCceEEEeCCC-----
Confidence 45888888 4455555444 556788999988889888633 3489999998776555432111
Q ss_pred ccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeecCCceE
Q 002164 392 IAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLAL 470 (958)
Q Consensus 392 ~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~~l 470 (958)
..+.++++.+.+..|++. + ...+.|++++. +|...+.+.... .....+++.|++..|
T Consensus 116 -------~~p~glavd~~~g~ly~~-d-----------~~~~~I~~~~~---dG~~~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 116 -------ESPGGLAVDWVHDKLYWT-D-----------SGTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp -------SCCCEEEEETTTTEEEEE-E-----------TTTTEEEEEET---TSCSCEEEECTTCSCEEEEEEETTTTEE
T ss_pred -------CCccEEEEecCCCeEEEE-c-----------CCCCeEEEEcC---CCCceEEEEeCCCCCcceEEEecCcCeE
Confidence 234578888888777663 2 23457888885 666655554322 234568999998899
Q ss_pred EEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCC
Q 002164 471 VYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGN 550 (958)
Q Consensus 471 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (958)
+++.+... .+|+++++++. ....+.........+ ++++|+++.|++... .
T Consensus 174 y~td~~~~--~~I~r~~~dG~--~~~~~~~~~~~~PnG------la~d~~~~~lY~aD~--------------------~ 223 (349)
T 3v64_C 174 YWTDWGNT--PRIEASSMDGS--GRRIIADTHLFWPNG------LTIDYAGRRMYWVDA--------------------K 223 (349)
T ss_dssp EEEECSSS--CEEEEEETTSC--SCEESCCSSCSCEEE------EEEETTTTEEEEEET--------------------T
T ss_pred EEeccCCC--CEEEEEeCCCC--CcEEEEECCCCCcce------EEEeCCCCEEEEEEC--------------------C
Confidence 88865442 57999999874 223332211111111 778998888888752 1
Q ss_pred CCeEEEEECCCCceEEEec
Q 002164 551 IPFLDLFDINTGSKERIWE 569 (958)
Q Consensus 551 ~~~L~~~dl~~g~~~~l~~ 569 (958)
...|+++|+++...+.+..
T Consensus 224 ~~~I~~~~~dG~~~~~~~~ 242 (349)
T 3v64_C 224 HHVIERANLDGSHRKAVIS 242 (349)
T ss_dssp TTEEEEEETTSCSCEEEEC
T ss_pred CCEEEEEeCCCCceEEEEe
Confidence 2369999998765555543
No 451
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.37 E-value=7.7e-05 Score=79.97 Aligned_cols=180 Identities=13% Similarity=-0.048 Sum_probs=115.4
Q ss_pred CceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhh
Q 002164 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (958)
Q Consensus 218 ~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (958)
...|.++++++++...+...... ...++|.++++.|+++-.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~-----p~g~~~d~~~~~ly~~D~---------------------------------- 49 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 49 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSS-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred CCeEEEEECCCcceEehhcCCCc-----eEEEEEEeCCCEEEEEEC----------------------------------
Confidence 45799999998776655432221 558899998878887610
Q ss_pred hccCchhhhHHHHhhcceEEEEEcCC-----eeeecC-CC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEE
Q 002164 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEIG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (958)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~~g-----~~~~l~-~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l 370 (958)
....|++++++| ....+. .. .....+++++.++.|+++... .+.|.+
T Consensus 50 --------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~------------~~~I~~ 103 (316)
T 1ijq_A 50 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 103 (316)
T ss_dssp --------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred --------------CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECC------------CCEEEE
Confidence 234588888733 223332 22 345677888888888887532 348999
Q ss_pred EeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE
Q 002164 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (958)
Q Consensus 371 ~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (958)
++++++..+.+..... ..+..++.+|++..|++ ++. .....|++++. +|...+.
T Consensus 104 ~~~~g~~~~~~~~~~~------------~~P~~iavdp~~g~ly~-~d~----------~~~~~I~~~~~---dG~~~~~ 157 (316)
T 1ijq_A 104 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGFMYW-TDW----------GTPAKIKKGGL---NGVDIYS 157 (316)
T ss_dssp EETTSSSEEEEEECTT------------CCEEEEEEETTTTEEEE-EEC----------SSSCEEEEEET---TSCCEEE
T ss_pred EeCCCCceEEEEECCC------------CCcceEEeCCCCCEEEE-Ecc----------CCCCeEEEEcC---CCCCeEE
Confidence 9998876655543111 24468899998877665 332 12357899885 6666555
Q ss_pred EEeec-cccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 451 LHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 451 l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
+.... ....+++|+++++.|+++.... .+|+++++++.
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~D~~~---~~I~~~d~dg~ 196 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 196 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EEECCCCCceEEEEeccCCEEEEEECCC---CeEEEEecCCC
Confidence 53322 2345789999999998875332 57999999874
No 452
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.37 E-value=5e-05 Score=80.04 Aligned_cols=201 Identities=8% Similarity=0.035 Sum_probs=112.5
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCC-ccccccccceEEe-cCCeEEEEEecCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWV-NNSTLLVCTIPLLRG 267 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~-~~~~~~~~~~~ws-pDG~~l~~~~~~~~~ 267 (958)
....++++|||+ |+++.. ....|++++.++...+.+..... .........++++ ++|++++...
T Consensus 31 ~p~~v~~~~~g~-l~v~~~--------~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~----- 96 (286)
T 1q7f_A 31 EPSGVAVNAQND-IIVADT--------NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER----- 96 (286)
T ss_dssp CEEEEEECTTCC-EEEEEG--------GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC-----
T ss_pred CCceEEECCCCC-EEEEEC--------CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC-----
Confidence 456678999997 444321 25679999988654444422110 0000114467784 6776554320
Q ss_pred CCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCe-eeecCCC--ccccccccCCCCc
Q 002164 268 DPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIGPP--AVYTSLDPSPDEK 344 (958)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~l~~~--~~~~~~~~SpDGk 344 (958)
. ....|++++.+|+ .+.+... .....++++|||+
T Consensus 97 ----------------------------------~---------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~ 133 (286)
T 1q7f_A 97 ----------------------------------S---------PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR 133 (286)
T ss_dssp ----------------------------------G---------GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC
T ss_pred ----------------------------------C---------CCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC
Confidence 0 1245777777553 3334322 4566788999997
Q ss_pred EEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCC
Q 002164 345 YILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGD 424 (958)
Q Consensus 345 ~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~ 424 (958)
|+++... .+.|++|+.+++..+.+..... ...+..++++|||+ +++ ++
T Consensus 134 -l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~~-----------~~~p~~i~~~~~g~-l~v-~~------ 181 (286)
T 1q7f_A 134 -IIVVECK------------VMRVIIFDQNGNVLHKFGCSKH-----------LEFPNGVVVNDKQE-IFI-SD------ 181 (286)
T ss_dssp -EEEEETT------------TTEEEEECTTSCEEEEEECTTT-----------CSSEEEEEECSSSE-EEE-EE------
T ss_pred -EEEEECC------------CCEEEEEcCCCCEEEEeCCCCc-----------cCCcEEEEECCCCC-EEE-EE------
Confidence 5444322 2479999988766555432110 02356899999997 433 22
Q ss_pred cccccccCCeEEEEeCCCCCCCCceEEEeec--cccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 425 AKVEVTPRDIIYTQQAEPVQGEGPEILHKLD--LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 425 ~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~--~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
...+.|++++. ++.....+.... .....+++++||+ |+++...+. ..|.+++.++
T Consensus 182 -----~~~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~--~~i~~~~~~g 238 (286)
T 1q7f_A 182 -----NRAHCVKVFNY---EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNN--FNLTIFTQDG 238 (286)
T ss_dssp -----GGGTEEEEEET---TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSS--CEEEEECTTS
T ss_pred -----CCCCEEEEEcC---CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCC--EEEEEECCCC
Confidence 23457888984 554333332211 2345689999996 444433221 2688888665
No 453
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.36 E-value=1.9e-06 Score=90.98 Aligned_cols=103 Identities=16% Similarity=-0.016 Sum_probs=69.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEE 749 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~ 749 (958)
.|.||++||....... .....| ......|+++||.|+. .+.+|+|.+. .......+|+.++++.
T Consensus 7 ~~~vvlvHG~~~~~~~------~~~~~~----~~~~~~L~~~G~~v~~---~d~~g~g~s~---~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 7 KYPIVLAHGMLGFDNI------LGVDYW----FGIPSALRRDGAQVYV---TEVSQLDTSE---VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp SSCEEEECCTTCCSEE------TTEESS----TTHHHHHHHTTCCEEE---ECCCSSSCHH---HHHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCCccc------cccccH----HHHHHHHHhCCCEEEE---EeCCCCCCch---hhHHHHHHHHHHHHHH
Confidence 5778999996421100 000011 2356678899999999 4555776653 1223444455554443
Q ss_pred HHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccCC
Q 002164 750 VVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAY 794 (958)
Q Consensus 750 l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~~ 794 (958)
+ +.+++.++||||||.++..++.+.|++++++|.++++.
T Consensus 71 ~------~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 S------GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp H------CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred h------CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 3 34689999999999999999999999999999998854
No 454
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.34 E-value=0.00011 Score=81.46 Aligned_cols=180 Identities=13% Similarity=-0.046 Sum_probs=117.6
Q ss_pred CceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhh
Q 002164 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (958)
Q Consensus 218 ~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (958)
...|++++++++....+...... ...++|.+.+..|+++-.
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~-----~~~l~~d~~~~~lywsD~---------------------------------- 131 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 131 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSC-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred cceeEEEccCCcceeEeccccCc-----ceEEeeeeccCceEEEec----------------------------------
Confidence 56899999998776666443322 558899988778887610
Q ss_pred hccCchhhhHHHHhhcceEEEEEcCC-----eeeecCC-C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEE
Q 002164 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEIGP-P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (958)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~~g-----~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l 370 (958)
....|++++++| ....+.. . .....+++.+.++.|+++... .+.|.+
T Consensus 132 --------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~------------~~~I~~ 185 (400)
T 3p5b_L 132 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 185 (400)
T ss_dssp --------------TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred --------------CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC------------CCeEEE
Confidence 224578888743 2233322 3 445567788778888887633 348999
Q ss_pred EeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE
Q 002164 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (958)
Q Consensus 371 ~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (958)
.+++|+..+.+..... ..++.++..|.+..|++ ++. .....|++++. +|...+.
T Consensus 186 ~~~~g~~~~~l~~~~~------------~~P~~iavdp~~g~ly~-td~----------~~~~~I~~~~~---dG~~~~~ 239 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGFMYW-TDW----------GTPAKIKKGGL---NGVDIYS 239 (400)
T ss_dssp ECTTTCSEEEEEECSS------------CCEEEEEEETTTTEEEE-EEC----------SSSCCEEEEET---TSCSCEE
T ss_pred EeCCCCceEEEEeCCC------------CCcceEEEecccCeEEE-EeC----------CCCCEEEEEeC---CCCccEE
Confidence 9999876665543211 23568899998776655 332 22357899885 7766666
Q ss_pred EEeec-cccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 451 LHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 451 l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
+.... ....+++++++++.|+++... ..+|+++++++.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~---~~~I~~~d~dG~ 278 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSK---LHSISSIDVNGG 278 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETT---TTEEEEEETTSC
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECC---CCEEEEEeCCCC
Confidence 64432 334678999999999887433 257999999874
No 455
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.33 E-value=2.3e-05 Score=88.78 Aligned_cols=262 Identities=13% Similarity=-0.003 Sum_probs=128.8
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceee-c-CCCCeEEEEEeec-----c----ccCCCCCceEEEEEcCCCcee
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTW-S-QDGKHLAFSIRID-----A----EDSSSSKLRVWVADVDTGKAR 232 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~w-S-PDG~~iaf~~~~~-----~----~~~~~~~~~l~~~~~~~g~~~ 232 (958)
.|.+.++.+ .+...+..++.+......++ + |||++|+...... + .........+-++|.++.+..
T Consensus 113 rVavIdl~t----~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~ 188 (595)
T 1fwx_A 113 RVARVRCDV----MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 188 (595)
T ss_dssp EEEEEETTT----TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE
T ss_pred EEEEEECCC----ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE
Confidence 577777744 33333324554444556666 5 9999985543210 0 011233557889999987654
Q ss_pred eccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCC--cccccchhhhhccCchhhhHHHH
Q 002164 233 PLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKR--DIIQVRTFQDLLKDEYDEDLFDY 310 (958)
Q Consensus 233 ~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~~d~~~~~~~~~~~~~ 310 (958)
.-...+.. ...++.+|||++++++......... +...... ..+.+-.+......-.++.. .
T Consensus 189 ~qI~Vgg~-----pd~~~~spdGk~~~vt~~~se~~~~----------i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~-~- 251 (595)
T 1fwx_A 189 WQVLVSGN-----LDNCDADYEGKWAFSTSYNSEKGMT----------LPEMTAAEMDHIVVFNIAEIEKAIAAGDY-Q- 251 (595)
T ss_dssp EEEEESSC-----CCCEEECSSSSEEEEEESCTTCCSS----------HHHHTCCSEEEEEEEEHHHHHHHHHHTCS-E-
T ss_pred EEEEeCCC-----ccceEECCCCCEEEEEecCcccCcc----------hhhccccccceEEEeeccceeEeccCCCe-e-
Confidence 32222221 3578899999999988543322100 0000000 00000000000000000000 0
Q ss_pred hhcceEEEEEc-C--Cee--eecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCC
Q 002164 311 YATTQLVLVSL-D--GTV--KEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP 385 (958)
Q Consensus 311 ~~~~~l~~~~~-~--g~~--~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~ 385 (958)
.-..+.++|. + +.. ..+..+.....+.+|||||+++++... ...+.++|+++.+.. ....
T Consensus 252 -~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~------------s~~VsVid~~~~~~~--~~~~ 316 (595)
T 1fwx_A 252 -ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL------------SPTVTVLDVTRFDAV--FYEN 316 (595)
T ss_dssp -EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT------------SSBEEEEEGGGHHHH--HHSC
T ss_pred -EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC------------CCeEEEEECcccccc--cccc
Confidence 0134778887 5 422 334333455678999999999988643 348999998843200 0000
Q ss_pred cc-ccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCC----CCCCC-ceEEEeecc---
Q 002164 386 LA-EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEP----VQGEG-PEILHKLDL--- 456 (958)
Q Consensus 386 ~~-~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~g~~-~~~l~~~~~--- 456 (958)
+. .........+..+++.++|+||| . +|.+.. ..+++..|+++. +.|.+ ...+...+.
T Consensus 317 l~~~~~v~~~v~vG~gP~h~aF~~dG-~-aY~t~~-----------ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 317 ADPRSAVVAEPELGLGPLHTAFDGRG-N-AYTSLF-----------LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp CCGGGGEEECCBCCSCEEEEEECTTS-E-EEEEET-----------TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred cCcccceEEEcCCCCCcceEEECCCC-e-EEEEEe-----------cCCcEEEEEhhHhhhhhcccccceeEEEeecccc
Confidence 00 00000011122567889999999 4 554443 244677777522 01112 122221111
Q ss_pred -----ccCceeeecCCceEEEEE
Q 002164 457 -----RYGGISWCDDSLALVYES 474 (958)
Q Consensus 457 -----~~~~~~~spDg~~l~~~~ 474 (958)
.......+|||++|+...
T Consensus 384 pGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 384 PGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEEEEETTTTSTTCCSSEEEEEE
T ss_pred cccceeccceEeCCCCCEEEEcC
Confidence 124467899999987764
No 456
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.32 E-value=0.00015 Score=80.34 Aligned_cols=225 Identities=10% Similarity=0.035 Sum_probs=133.5
Q ss_pred cceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCc----eEEEeccCCc
Q 002164 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI----FVRELCDLPL 386 (958)
Q Consensus 313 ~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~----~~~~l~~~~~ 386 (958)
...|.++++ ++....+... .....++|+++++.|+++... .+.|+.+++++. ....+....
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~------------~~~I~~~~~~g~~~~~~~~~~~~~~- 157 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD- 157 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEEC------CCCEEEECSS-
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecC------------CCeEEEEEcccCCCCCcceEEEeCC-
Confidence 346888888 4455555444 667788999988999888633 247888888763 222222211
Q ss_pred cccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeec
Q 002164 387 AEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCD 465 (958)
Q Consensus 387 ~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~sp 465 (958)
...+.++++.+.+..|++. + ...+.|+++++ +|+..+.+.... .....++..|
T Consensus 158 -----------~~~p~glavD~~~~~lY~~-d-----------~~~~~I~~~~~---~g~~~~~l~~~~~~~P~~iavdp 211 (400)
T 3p5b_L 158 -----------IQAPDGLAVDWIHSNIYWT-D-----------SVLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 211 (400)
T ss_dssp -----------CSCEEEEEEETTTTEEEEE-E-----------TTTTEEEEECT---TTCSEEEEEECSSCCEEEEEEET
T ss_pred -----------CCCcccEEEEecCCceEEE-E-----------CCCCeEEEEeC---CCCceEEEEeCCCCCcceEEEec
Confidence 0234577888777766653 2 23457888885 776666664432 2345688999
Q ss_pred CCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCC
Q 002164 466 DSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGA 545 (958)
Q Consensus 466 Dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~ 545 (958)
.+..|+++.+... .+|+++++++. ....+.........+ ++++++++.|++...
T Consensus 212 ~~g~ly~td~~~~--~~I~~~~~dG~--~~~~~~~~~l~~P~g------lavd~~~~~lY~aD~---------------- 265 (400)
T 3p5b_L 212 VHGFMYWTDWGTP--AKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS---------------- 265 (400)
T ss_dssp TTTEEEEEECSSS--CCEEEEETTSC--SCEEEECSSCSCEEE------EEEETTTTEEEEEET----------------
T ss_pred ccCeEEEEeCCCC--CEEEEEeCCCC--ccEEEEECCCCceEE------EEEEeCCCEEEEEEC----------------
Confidence 9889988865432 46999999884 333333222111112 778888888888752
Q ss_pred CCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCC
Q 002164 546 TPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKK 620 (958)
Q Consensus 546 ~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~ 620 (958)
....|+++|+++...+.+...... . .....++.++..++++.. ....|++++..+|+
T Consensus 266 ----~~~~I~~~d~dG~~~~~~~~~~~~--l---------~~P~gl~v~~~~lywtd~---~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 266 ----KLHSISSIDVNGGNRKTILEDEKR--L---------AHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 322 (400)
T ss_dssp ----TTTEEEEEETTSCCCEEEEECSST--T---------SSEEEEEEETTEEEEEES---SSCSEEEEESSSCC
T ss_pred ----CCCEEEEEeCCCCccEEEEeCCCC--C---------CCCEEEEEeCCEEEEecC---CCCeEEEEEcCCCC
Confidence 123699999987766666543221 0 001223445556665542 23457777755554
No 457
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.29 E-value=0.00011 Score=78.64 Aligned_cols=224 Identities=7% Similarity=-0.048 Sum_probs=132.1
Q ss_pred cceEEEEEcCCe---eeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCcc
Q 002164 313 TTQLVLVSLDGT---VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLA 387 (958)
Q Consensus 313 ~~~l~~~~~~g~---~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~ 387 (958)
...|.++++++. ...+... .....++|++.++.|+++... .+.|+.++++++.. +.+....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~------------~~~I~r~~~~g~~~~~~~~~~~-- 77 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS------------EEAIKRTEFNKTESVQNVVVSG-- 77 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT------------TTEEEEEETTSSSCCCEEEEEC--
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC------------CCcEEEEEccCCCceEEEEcCC--
Confidence 356888998432 2333222 445678899988888888633 34788888886532 1111100
Q ss_pred ccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe-eccccCceeeecC
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK-LDLRYGGISWCDD 466 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~-~~~~~~~~~~spD 466 (958)
...+.++++.+.+..|++. + ...+.|++++. +|...+.+.. .......++..|+
T Consensus 78 ----------l~~p~glavd~~~g~ly~~-d-----------~~~~~I~~~~~---dG~~~~~l~~~~~~~P~giavdp~ 132 (318)
T 3sov_A 78 ----------LLSPDGLACDWLGEKLYWT-D-----------SETNRIEVSNL---DGSLRKVLFWQELDQPRAIALDPS 132 (318)
T ss_dssp ----------CSCCCEEEEETTTTEEEEE-E-----------TTTTEEEEEET---TSCSCEEEECSSCSSEEEEEEEGG
T ss_pred ----------CCCccEEEEEcCCCeEEEE-E-----------CCCCEEEEEEC---CCCcEEEEEeCCCCCccEEEEeCC
Confidence 0234578888877776663 2 23457888885 6766665542 2233456889998
Q ss_pred CceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCC
Q 002164 467 SLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (958)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (958)
+..|+++.+... .+|+++++++. ....+.........+ ++++|+++.|++...
T Consensus 133 ~g~ly~td~~~~--~~I~r~~~dG~--~~~~~~~~~l~~Png------lavd~~~~~lY~aD~----------------- 185 (318)
T 3sov_A 133 SGFMYWTDWGEV--PKIERAGMDGS--SRFIIINSEIYWPNG------LTLDYEEQKLYWADA----------------- 185 (318)
T ss_dssp GTEEEEEECSSS--CEEEEEETTSC--SCEEEECSSCSCEEE------EEEETTTTEEEEEET-----------------
T ss_pred CCEEEEEecCCC--CEEEEEEcCCC--CeEEEEECCCCCccE------EEEeccCCEEEEEEC-----------------
Confidence 888888765432 67999999874 223332221111111 788998888888752
Q ss_pred CCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002164 547 PEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (958)
Q Consensus 547 ~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~ 621 (958)
....|+++|+++...+.+...... .. ..++.++..++++.. ....|++++..+|+.
T Consensus 186 ---~~~~I~~~d~dG~~~~~~~~~~~~----~P---------~glav~~~~lywtd~---~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 186 ---KLNFIHKSNLDGTNRQAVVKGSLP----HP---------FALTLFEDILYWTDW---STHSILACNKYTGEG 241 (318)
T ss_dssp ---TTTEEEEEETTSCSCEEEECSCCS----CE---------EEEEEETTEEEEEET---TTTEEEEEETTTCCS
T ss_pred ---CCCEEEEEcCCCCceEEEecCCCC----Cc---------eEEEEeCCEEEEEec---CCCeEEEEECCCCCc
Confidence 123699999987666655532211 01 122334556665522 345677777766543
No 458
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.27 E-value=1.9e-06 Score=96.18 Aligned_cols=108 Identities=13% Similarity=-0.102 Sum_probs=73.7
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHH-HHCCcEEEEcCCCCCCCCCCcccch--hhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLW-LARGFAILGGPTTPIIGEGDEEAND--RFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-a~~G~~vl~~~~~~~~G~G~~~~~~--~~~~~~~~D~~~a 746 (958)
.|+||++||.... ....+.......| +..+|.|++ .|.+|+|.+.... .......+++.+.
T Consensus 69 ~p~vvliHG~~~s-------------~~~~w~~~l~~~ll~~~~~~VI~---vD~~g~g~s~y~~~~~~~~~v~~~la~l 132 (449)
T 1hpl_A 69 RKTRFIIHGFIDK-------------GEESWLSTMCQNMFKVESVNCIC---VDWKSGSRTAYSQASQNVRIVGAEVAYL 132 (449)
T ss_dssp SEEEEEECCCCCT-------------TCTTHHHHHHHHHHHHCCEEEEE---EECHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCC-------------CCccHHHHHHHHHHhcCCeEEEE---EeCCcccCCccHHHHHHHHHHHHHHHHH
Confidence 6899999995311 1011111123344 457999999 5555666653211 1123345677888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
+++|.++..++.+++.|+||||||.+|..++.+.|++++.++...|.
T Consensus 133 l~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 133 VGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred HHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 88887543356789999999999999999999999999999988764
No 459
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.27 E-value=2e-06 Score=92.31 Aligned_cols=88 Identities=17% Similarity=0.167 Sum_probs=64.3
Q ss_pred HHHHHHHHCCcE---EEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHH
Q 002164 703 TSVLLWLARGFA---ILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLL 777 (958)
Q Consensus 703 ~~~~~la~~G~~---vl~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a 777 (958)
..+..|+++||. |+. .+..|+|.+... ........+++.+.++.+.++. ..+++.|+||||||.++..++
T Consensus 72 ~l~~~L~~~Gy~~~~V~~---~D~~g~G~S~~~~~~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a 146 (342)
T 2x5x_A 72 SVYAELKARGYNDCEIFG---VTYLSSSEQGSAQYNYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATL 146 (342)
T ss_dssp CHHHHHHHTTCCTTSEEE---ECCSCHHHHTCGGGCCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEE---EeCCCCCccCCccccCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHH
Confidence 356678899998 888 445565544221 1122455677777777777652 236899999999999999999
Q ss_pred HhC--CCceeEEEEeccCCC
Q 002164 778 AHA--PHLFCCGIARSGAYN 795 (958)
Q Consensus 778 ~~~--p~~~~a~v~~~~~~~ 795 (958)
.++ |++++++|++++...
T Consensus 147 ~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 147 QYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHTCGGGEEEEEEESCCTT
T ss_pred HHcCchhhhcEEEEECCCcc
Confidence 987 889999999987643
No 460
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.22 E-value=1.8e-06 Score=95.77 Aligned_cols=167 Identities=14% Similarity=0.151 Sum_probs=104.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHHCCc---EEEEcCCCCCCCCCCcc---------------c
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLARGF---AILGGPTTPIIGEGDEE---------------A 731 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~G~---~vl~~~~~~~~G~G~~~---------------~ 731 (958)
.|.||++||..... ..| ...+..|+++|| .|++ .+..|+|.+. +
T Consensus 22 ~ppVVLlHG~g~s~-----------~~w----~~la~~La~~Gy~~~~Via---~DlpG~G~S~~~~~Dv~~~G~~~~~G 83 (484)
T 2zyr_A 22 FRPVVFVHGLAGSA-----------GQF----ESQGMRFAANGYPAEYVKT---FEYDTISWALVVETDMLFSGLGSEFG 83 (484)
T ss_dssp CCCEEEECCTTCCG-----------GGG----HHHHHHHHHTTCCGGGEEE---ECCCHHHHHHHTTTSTTTTTGGGHHH
T ss_pred CCEEEEECCCCCCH-----------HHH----HHHHHHHHHcCCCcceEEE---EECCCCCccccccccccccccccccc
Confidence 57789999964211 111 245667889999 5888 4555666430 0
Q ss_pred -------------------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCC---CceeEEEE
Q 002164 732 -------------------NDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAP---HLFCCGIA 789 (958)
Q Consensus 732 -------------------~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p---~~~~a~v~ 789 (958)
........+.++.+.++.+.++. +.+++.++||||||.+++.++.++| ++++++|+
T Consensus 84 ~n~~p~id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVl 161 (484)
T 2zyr_A 84 LNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLIL 161 (484)
T ss_dssp HHHGGGSCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEE
T ss_pred cccccccccccccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEE
Confidence 00123345677777787777753 2368999999999999999999987 48999999
Q ss_pred eccCCCCCCCCCCcccccchhhhcHHHHHhcCcccccCCCCCCEEEEeeCCCCC--CCCChHHHHHHHHHHHhCCCcEEE
Q 002164 790 RSGAYNRTLTPFGFQNEDRTLWEATSTYVEMSPFMSANKLKKPILLVHGEEDNN--SGTLTMQSDRFFNALKGHGALCRL 867 (958)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~Lii~G~~D~~--v~~~~~~~~~~~~~l~~~g~~~~~ 867 (958)
+++.++.. + ....++|.+.|..|.. ++. +.. .++. ..+.
T Consensus 162 Iapp~~~d----------------------~-------p~g~~~L~ilG~~d~~p~V~~-pss------~L~~---ga~~ 202 (484)
T 2zyr_A 162 LDGVWGVD----------------------A-------PEGIPTLAVFGNPKALPALGL-PEE------KVVY---NATN 202 (484)
T ss_dssp ESCCCSEE----------------------C-------CTTSCEEEEEECGGGSCCSSC-CSS------CCEE---TSEE
T ss_pred ECCccccc----------------------c-------CcCCHHHHHhCCCCcCCcccC-hhH------hcCC---CceE
Confidence 99875410 0 0235677777766531 110 111 1210 1256
Q ss_pred EEeCCCCccCCCcccHHHHHHHHHHHHHHh
Q 002164 868 VILPFESHGYAARESIMHVLWETDRWLQKY 897 (958)
Q Consensus 868 ~~~p~~~H~~~~~~~~~~~~~~i~~fl~~~ 897 (958)
+++++++|... ..+ ..+.+.+.+||...
T Consensus 203 v~i~~a~H~~l-l~d-p~v~~~Vl~fL~~~ 230 (484)
T 2zyr_A 203 VYFNNMTHVQL-CTS-PETFAVMFEFINGY 230 (484)
T ss_dssp EEETTCCHHHH-HHC-HHHHHHHHHHHHSS
T ss_pred EEECCCCcccc-ccC-HHHHHHHHHHhccc
Confidence 67799999853 222 34566788888753
No 461
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.19 E-value=3.3e-06 Score=94.32 Aligned_cols=107 Identities=11% Similarity=-0.075 Sum_probs=71.4
Q ss_pred ceEEEEECCCCCcCcccCCcccCCCCCCCCcCcHHHHHHHH-CCcEEEEcCCCCCCCCCCcccc--hhhHHHHHHHHHHH
Q 002164 670 LPCLFWSYPGEFKSKDAAGQVRGSPNEFPRIGSTSVLLWLA-RGFAILGGPTTPIIGEGDEEAN--DRFVEQLVACAEAA 746 (958)
Q Consensus 670 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~G~~vl~~~~~~~~G~G~~~~~--~~~~~~~~~D~~~a 746 (958)
.|+||++||.... ....+.......|++ .+|.|+++|. +|+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~s-------------~~~~w~~~l~~~ll~~~~~~VI~vD~---~g~g~s~y~~~~~~~~~~a~~l~~l 133 (450)
T 1rp1_A 70 KKTRFIIHGFIDK-------------GEENWLLDMCKNMFKVEEVNCICVDW---KKGSQTSYTQAANNVRVVGAQVAQM 133 (450)
T ss_dssp SEEEEEECCCCCT-------------TCTTHHHHHHHHHTTTCCEEEEEEEC---HHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEccCCCC-------------CCcchHHHHHHHHHhcCCeEEEEEeC---ccccCCcchHHHHHHHHHHHHHHHH
Confidence 6899999995311 110111122334554 4899999544 455544211 11233456778888
Q ss_pred HHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCCceeEEEEeccC
Q 002164 747 VEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGA 793 (958)
Q Consensus 747 v~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~~~ 793 (958)
+++|.++..++.+++.|+||||||.+|..++.+.|+ ++.++...|.
T Consensus 134 l~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 134 LSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred HHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 888865433566899999999999999999999998 9999988764
No 462
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.18 E-value=0.002 Score=75.53 Aligned_cols=208 Identities=11% Similarity=-0.016 Sum_probs=121.5
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~ 411 (958)
.....++|.+.+..|+++... .+.|+.++++|+..+.+..... ..+.++++.+.+.
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~------------~~~I~r~~~~g~~~~~v~~~~~------------~~p~GlAvD~~~~ 404 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDE------------VRAIRRSFIDGSGSQFVVTAQI------------AHPDGIAVDWVAR 404 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC------------SCCCEEEEETTTT
T ss_pred CccEEEEEEcCCCeEEEEeCC------------CCeEEEEEcCCCccEEEEECCC------------CCcCceEEecccC
Confidence 344567788877788877632 2378888888765444432111 2345788887777
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
.|++. + ...+.|.+.++ +|+..+.+.... .....++..|....|+++.+... .+|+++++++
T Consensus 405 ~lY~t-D-----------~~~~~I~v~~~---~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~--~~I~r~~~dG 467 (619)
T 3s94_A 405 NLYWT-D-----------TGTDRIEVTRL---NGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEI--PKIERAALDG 467 (619)
T ss_dssp EEEEE-E-----------TTTTEEEEEET---TSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSS--CEEEEEETTS
T ss_pred cEEEE-e-----------CCCCcEEEEeC---CCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCC--CEEEEEccCC
Confidence 76653 2 23567888885 776665664322 23456889998778888865442 6799999988
Q ss_pred CCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCCCCCCCeEEEEECCCCceEEEecC
Q 002164 491 KDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATPEGNIPFLDLFDINTGSKERIWES 570 (958)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~ 570 (958)
. ....+.........+ ++.+++++.|++... ...+|..+++++...+.+...
T Consensus 468 ~--~~~~l~~~~l~~P~G------lalD~~~~~LY~aD~--------------------~~~~I~~~~~dG~~~~~~~~~ 519 (619)
T 3s94_A 468 S--DRVVLVNTSLGWPNG------LALDYDEGKIYWGDA--------------------KTDKIEVMNTDGTGRRVLVED 519 (619)
T ss_dssp C--SCEEEECSSCSCEEE------EEEETTTTEEEEEET--------------------TTTEEEEEESSSCCCEEEEEC
T ss_pred C--ccEEEEeCCCCCCee------eEEcccCCEEEEEEC--------------------CCCEEEEEecCCCceEEEecc
Confidence 4 233333222211111 567777777777641 123688899877666555432
Q ss_pred CcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCeeEe
Q 002164 571 DKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSCQI 624 (958)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~~L 624 (958)
... ....+..++..++++-. ....|++++..+|+.+.|
T Consensus 520 ~l~-------------~P~glav~~~~ly~tD~---~~~~I~~~~k~~g~~~~~ 557 (619)
T 3s94_A 520 KIP-------------HIFGFTLLGDYVYWTDW---QRRSIERVHKRSAEREVI 557 (619)
T ss_dssp CCC-------------SSCCEEEETTEEEEECT---TSSCEEEEESSSCCEEEE
T ss_pred CCC-------------CcEEEEEECCEEEEeec---CCCeEEEEEcCCCceEEE
Confidence 211 01123334454444332 234577777777654443
No 463
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.17 E-value=0.00018 Score=76.98 Aligned_cols=137 Identities=9% Similarity=-0.006 Sum_probs=88.3
Q ss_pred ceEEEEEc-CCe--eeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCcccc
Q 002164 314 TQLVLVSL-DGT--VKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAED 389 (958)
Q Consensus 314 ~~l~~~~~-~g~--~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~ 389 (958)
..|+++++ ++. ...+... .....+++.+.++.|+++... .+.|.+++++|...+.+.....
T Consensus 57 ~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~------------~~~I~~~~~dG~~~~~l~~~~~--- 121 (318)
T 3sov_A 57 EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE------------TNRIEVSNLDGSLRKVLFWQEL--- 121 (318)
T ss_dssp TEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC---
T ss_pred CcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC------------CCEEEEEECCCCcEEEEEeCCC---
Confidence 45888888 332 1222222 345567788888888887532 2489999999876555532111
Q ss_pred CcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeecCCc
Q 002164 390 IPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDDSL 468 (958)
Q Consensus 390 ~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spDg~ 468 (958)
..+..+++.|++..|++ ++. .....|++++. +|...+.+.... ..-.+++|+++++
T Consensus 122 ---------~~P~giavdp~~g~ly~-td~----------~~~~~I~r~~~---dG~~~~~~~~~~l~~Pnglavd~~~~ 178 (318)
T 3sov_A 122 ---------DQPRAIALDPSSGFMYW-TDW----------GEVPKIERAGM---DGSSRFIIINSEIYWPNGLTLDYEEQ 178 (318)
T ss_dssp ---------SSEEEEEEEGGGTEEEE-EEC----------SSSCEEEEEET---TSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred ---------CCccEEEEeCCCCEEEE-Eec----------CCCCEEEEEEc---CCCCeEEEEECCCCCccEEEEeccCC
Confidence 23467889998776655 322 22457999985 776665554322 2345789999999
Q ss_pred eEEEEEeccccceEEEEEcCCCC
Q 002164 469 ALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 469 ~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
.|+++.... .+|+++++++.
T Consensus 179 ~lY~aD~~~---~~I~~~d~dG~ 198 (318)
T 3sov_A 179 KLYWADAKL---NFIHKSNLDGT 198 (318)
T ss_dssp EEEEEETTT---TEEEEEETTSC
T ss_pred EEEEEECCC---CEEEEEcCCCC
Confidence 999885332 57999999874
No 464
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.16 E-value=2.7e-05 Score=92.99 Aligned_cols=180 Identities=13% Similarity=-0.063 Sum_probs=112.3
Q ss_pred CceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhh
Q 002164 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (958)
Q Consensus 218 ~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (958)
...|+++++++++...+...... ...++|.+++..|+++-.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~-----p~gla~d~~~~~Ly~sD~---------------------------------- 425 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 425 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTT-----CCCCEEETTTTEEEECCT----------------------------------
T ss_pred ccceEEEeCCCCcceeeeccCcc-----eEEEccccccCeEEEEec----------------------------------
Confidence 34788889888776655433222 457899998888887610
Q ss_pred hccCchhhhHHHHhhcceEEEEEcCC-----eeeecCC-C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEE
Q 002164 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEIGP-P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (958)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~~g-----~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l 370 (958)
....|++++++| ....+.. . .....+++.+.++.|+++... .+.|++
T Consensus 426 --------------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~------------~~~I~v 479 (699)
T 1n7d_A 426 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 479 (699)
T ss_dssp --------------TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTT------------TSCEEE
T ss_pred --------------CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEecc------------CCeEEE
Confidence 123477888733 2222222 2 334567777777777776422 347999
Q ss_pred EeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE
Q 002164 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (958)
Q Consensus 371 ~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (958)
++++++..+.+..... ..+..++++|++..|++. +. .....|+++++ +|...+.
T Consensus 480 ~d~dg~~~~~l~~~~~------------~~P~giavDp~~g~ly~t-d~----------~~~~~I~~~~~---dG~~~~~ 533 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQG------------SKPRAIVVDPVHGFMYWT-DW----------GTPAKIKKGGL---NGVDIYS 533 (699)
T ss_dssp EBSSSCCEEEECCCSS------------CCCCCEECCSSSSCCEEC-CC----------SSSCCEEBCCS---SSCCCCE
T ss_pred EecCCCceEEEEeCCC------------CCcceEEEccCCCcEEEc-cc----------CCCCeEEEEeC---CCCCeeE
Confidence 9999876666543211 234678999988877762 11 12356888874 6655555
Q ss_pred EEee-ccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 451 LHKL-DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 451 l~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
+... -....+++|+|++++|+++.... .+|+++++++.
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~---~~I~~~d~dG~ 572 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKL---HSISSIDVNGG 572 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTT---TEEEEECSSSS
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCC---CeEEEEccCCC
Confidence 5322 22346799999999998875332 57999999874
No 465
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.15 E-value=0.00066 Score=71.57 Aligned_cols=192 Identities=13% Similarity=0.092 Sum_probs=106.3
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.....+++|||+ |+++. .+...|++++.+ ++.+.+...... .....+++.+||++.+...
T Consensus 58 ~~~~i~~~~~g~-l~v~~--------~~~~~i~~~~~~-g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~------- 117 (299)
T 2z2n_A 58 KVMCLTISSDGE-VWFTE--------NAANKIGRITKK-GIIKEYTLPNPD---SAPYGITEGPNGDIWFTEM------- 117 (299)
T ss_dssp CEEEEEECTTSC-EEEEE--------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECTTSCEEEEET-------
T ss_pred ceeeEEECCCCC-EEEeC--------CCCCeEEEECCC-CcEEEEeCCCcC---CCceeeEECCCCCEEEEec-------
Confidence 567788999986 44432 124579999987 444433311111 0155778889886544320
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCC--C-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~--~-~~~~~~~~SpDGk~l 346 (958)
....|++++.+|+...+.. . .....++++|||+ |
T Consensus 118 ------------------------------------------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l 154 (299)
T 2z2n_A 118 ------------------------------------------NGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNA-L 154 (299)
T ss_dssp ------------------------------------------TTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSC-E
T ss_pred ------------------------------------------CCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCC-E
Confidence 1235777777554443321 2 4466788999996 4
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
++.... .+.+++++. ++..+.+.. +.. ...+..+.+++||+ +++. .
T Consensus 155 ~v~~~~------------~~~i~~~~~-~g~~~~~~~-~~~----------~~~~~~i~~~~~g~-l~v~-~-------- 200 (299)
T 2z2n_A 155 WFTENQ------------NNAIGRITE-SGDITEFKI-PTP----------ASGPVGITKGNDDA-LWFV-E-------- 200 (299)
T ss_dssp EEEETT------------TTEEEEECT-TCCEEEEEC-SST----------TCCEEEEEECTTSS-EEEE-E--------
T ss_pred EEEeCC------------CCEEEEEcC-CCcEEEeeC-CCC----------CCcceeEEECCCCC-EEEE-c--------
Confidence 444321 237888888 444433311 100 02345788999987 3332 1
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEee--ccccCceeeecCCceEEEEEeccccceEEEEEcCC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRYGGISWCDDSLALVYESWYKTRRTRTWVISPG 489 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~ 489 (958)
...+.|++++. + ++...+... ......+.++++|+ |+++.... ..|++++++
T Consensus 201 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~---~~i~~~d~~ 254 (299)
T 2z2n_A 201 ---IIGNKIGRITT---S-GEITEFKIPTPNARPHAITAGAGID-LWFTEWGA---NKIGRLTSN 254 (299)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTT---TEEEEEETT
T ss_pred ---cCCceEEEECC---C-CcEEEEECCCCCCCceeEEECCCCC-EEEeccCC---ceEEEECCC
Confidence 12456888873 3 333333211 23345688899987 55443222 458888874
No 466
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.15 E-value=4.6e-05 Score=90.97 Aligned_cols=226 Identities=10% Similarity=0.033 Sum_probs=132.6
Q ss_pred ceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC----ceEEEeccCCcc
Q 002164 314 TQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG----IFVRELCDLPLA 387 (958)
Q Consensus 314 ~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~----~~~~~l~~~~~~ 387 (958)
..|+++++ +++...+... .....++|++++..|+++... .+.|+.+++++ .....+....
T Consensus 386 ~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~------------~~~I~~~~~~g~~~~~~~~~~i~~~-- 451 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD-- 451 (699)
T ss_dssp TC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTT------------TTSBEEEESCCCCC-CCCCCBCCSC--
T ss_pred cceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecC------------CCeEEEEecCCCCCCcceEEEEeCC--
Confidence 46888888 5555555444 566788999998888887532 24788888876 2211111100
Q ss_pred ccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee-ccccCceeeecC
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDD 466 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~spD 466 (958)
...+..+++.+.+..|++. + ...+.|++++. +|...+.+... ......++++|+
T Consensus 452 ----------~~~P~glavD~~~g~LY~t-D-----------~~~~~I~v~d~---dg~~~~~l~~~~~~~P~giavDp~ 506 (699)
T 1n7d_A 452 ----------IQAPDGLAVDWIHSNIYWT-D-----------SVLGTVSVADT---KGVKRKTLFREQGSKPRAIVVDPV 506 (699)
T ss_dssp ----------C--CCCEECCCSSSBCEEC-C-----------TTTSCEEEEBS---SSCCEEEECCCSSCCCCCEECCSS
T ss_pred ----------CCCcceEEEEeeCCcEEEE-e-----------ccCCeEEEEec---CCCceEEEEeCCCCCcceEEEccC
Confidence 0234567888777777662 1 23456888885 66665555332 234567899999
Q ss_pred CceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCC
Q 002164 467 SLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (958)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (958)
+.+|+++.+... .+|+++++++.. .+.+.........+ ++|+|++++|++...
T Consensus 507 ~g~ly~td~~~~--~~I~~~~~dG~~--~~~l~~~~l~~PnG------lavd~~~~~LY~aD~----------------- 559 (699)
T 1n7d_A 507 HGFMYWTDWGTP--AKIKKGGLNGVD--IYSLVTENIQWPNG------ITLDLLSGRLYWVDS----------------- 559 (699)
T ss_dssp SSCCEECCCSSS--CCEEBCCSSSCC--CCEESCSSCSSCCC------EEECTTTCCEEEEET-----------------
T ss_pred CCcEEEcccCCC--CeEEEEeCCCCC--eeEEEeCCCCCccE------EEEeccCCEEEEEec-----------------
Confidence 888888754332 569999988742 22222211111111 789999988888752
Q ss_pred CCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCee
Q 002164 547 PEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKSC 622 (958)
Q Consensus 547 ~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~~ 622 (958)
....|+++++++...+.+...... ......++.|++.++++.. ....|++++..+|+..
T Consensus 560 ---~~~~I~~~d~dG~~~~~~~~~~~~-----------~~~P~glavd~~~lywtd~---~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 560 ---KLHSISSIDVNGGNRKTILEDEKR-----------LAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGSDV 618 (699)
T ss_dssp ---TTTEEEEECSSSSCCEEECCCSSS-----------CSSCCCCEEETTEEEEECS---TTTCEEEEETTTEEEE
T ss_pred ---CCCeEEEEccCCCceEEEEecCCc-----------CCCceEeEEECCEEEEEeC---CCCeEEEEEccCCCce
Confidence 123689999986655555432211 0011234556666665552 2356888887666543
No 467
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.14 E-value=0.00059 Score=71.38 Aligned_cols=182 Identities=12% Similarity=0.026 Sum_probs=107.5
Q ss_pred CCCCceEEEEEcCCCceeeccCCCC-ccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccc
Q 002164 215 SSSKLRVWVADVDTGKARPLFQSPD-IYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVR 293 (958)
Q Consensus 215 ~~~~~~l~~~~~~~g~~~~lt~~~~-~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 293 (958)
+.+...|+++|.++|+...-...+. .. ...+.++|||++|+ +
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~~~----~~~~~~~pdG~ilv-s-------------------------------- 53 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKGWE----CNSVAATKAGEILF-S-------------------------------- 53 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTTCC----CCEEEECTTSCEEE-E--------------------------------
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCccCC----CcCeEECCCCCEEE-e--------------------------------
Confidence 3457789999997887654433322 11 45788999999777 3
Q ss_pred hhhhhccCchhhhHHHHhhcceEEEEEcCCe-eeecCCC--ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEE
Q 002164 294 TFQDLLKDEYDEDLFDYYATTQLVLVSLDGT-VKEIGPP--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (958)
Q Consensus 294 ~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~l~~~--~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l 370 (958)
....++.++.+|+ ...+..+ ..+....++|||+.|+..... ...++.
T Consensus 54 ------------------~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~------------~~~v~~ 103 (276)
T 3no2_A 54 ------------------YSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGH------------PSTILE 103 (276)
T ss_dssp ------------------CBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST------------TEEEEE
T ss_pred ------------------CCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCC------------CCEEEE
Confidence 1123555555442 2333222 345567889999998876631 236777
Q ss_pred EeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE
Q 002164 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (958)
Q Consensus 371 ~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (958)
++.+|+....+....... ......+.+...+||+.++.. ...+.|+.++. +|+...+
T Consensus 104 vd~~Gk~l~~~~~~~~~~-------~~~~~~~~v~~~~~G~~lv~~-------------~~~~~v~~~d~---~G~~~w~ 160 (276)
T 3no2_A 104 VNMKGEVLSKTEFETGIE-------RPHAQFRQINKNKKGNYLVPL-------------FATSEVREIAP---NGQLLNS 160 (276)
T ss_dssp ECTTSCEEEEEEECCSCS-------SGGGSCSCCEECTTSCEEEEE-------------TTTTEEEEECT---TSCEEEE
T ss_pred EeCCCCEEEEEeccCCCC-------cccccccCceECCCCCEEEEe-------------cCCCEEEEECC---CCCEEEE
Confidence 887777665543211100 001233456789999876542 34567888884 5544333
Q ss_pred EEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 451 LHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 451 l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
... ..........++|+.|+.... + .+|+.++++++
T Consensus 161 ~~~-~~~~~~~~~~~~g~~~v~~~~-~---~~v~~~d~~tG 196 (276)
T 3no2_A 161 VKL-SGTPFSSAFLDNGDCLVACGD-A---HCFVQLNLESN 196 (276)
T ss_dssp EEC-SSCCCEEEECTTSCEEEECBT-T---SEEEEECTTTC
T ss_pred EEC-CCCccceeEcCCCCEEEEeCC-C---CeEEEEeCcCC
Confidence 322 233445677889987765432 2 46999998864
No 468
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.13 E-value=0.00032 Score=84.20 Aligned_cols=180 Identities=13% Similarity=-0.046 Sum_probs=117.0
Q ss_pred CceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhh
Q 002164 218 KLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQD 297 (958)
Q Consensus 218 ~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d 297 (958)
...|+.+++++++...+...... ...++|.+.+..||++-.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~-----~~gl~~d~~~~~lY~sD~---------------------------------- 443 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL---------------------------------- 443 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSS-----EEEEEEETTTTEEEEEET----------------------------------
T ss_pred ccceeEeeccCCcceeeecCCCc-----eEEEeecccCCeeEEeec----------------------------------
Confidence 45688888887766665543322 457888887777776610
Q ss_pred hccCchhhhHHHHhhcceEEEEEcCC-----eeeecCC-C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEE
Q 002164 298 LLKDEYDEDLFDYYATTQLVLVSLDG-----TVKEIGP-P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGV 370 (958)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~l~~~~~~g-----~~~~l~~-~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l 370 (958)
....|++++++| ....+.. . .....+++.+.++.|+++... .+.|++
T Consensus 444 --------------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~------------~~~I~v 497 (791)
T 3m0c_C 444 --------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSV 497 (791)
T ss_dssp --------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEE
T ss_pred --------------cceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC------------CCeEEE
Confidence 224577877743 2233332 3 455677888889999888633 348999
Q ss_pred EeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceE
Q 002164 371 WTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEI 450 (958)
Q Consensus 371 ~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 450 (958)
.+++|+..+.|....+ ..++++++.|.+..|++ ++. +....|+++++ +|...+.
T Consensus 498 ~~ldG~~~~~l~~~~l------------~~P~gIaVDp~~g~LYw-tD~----------g~~~~I~~~~~---dG~~~~~ 551 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENG------------SKPRAIVVDPVHGFMYW-TDW----------GTPAKIKKGGL---NGVDIYS 551 (791)
T ss_dssp EETTSSSEEEEEECTT------------CCEEEEEEETTTTEEEE-EEC----------SSSCEEEEEET---TSCCEEE
T ss_pred EeCCCCeEEEEEeCCC------------CCcceEEEecCCCCEEE-ecC----------CCCCeEEEEec---CCCceEE
Confidence 9999887666643211 23568999998776665 332 22357888885 7776666
Q ss_pred EEeec-cccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 451 LHKLD-LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 451 l~~~~-~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
+.... ....+++++++++.|+++... ..+|+++++++.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~---~~~I~~~d~dG~ 590 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSK---LHSISSIDVNGG 590 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETT---TTEEEEEETTSC
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCC---CCcEEEEecCCC
Confidence 64433 334568999999998887432 257999999885
No 469
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.13 E-value=0.0015 Score=68.69 Aligned_cols=191 Identities=16% Similarity=0.120 Sum_probs=106.9
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
.+..+.++|||+ |++.. .....|++++.+ ++...+...... ..+..+++++||++.+.. .
T Consensus 16 ~~~~i~~d~~g~-l~v~~--------~~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-~------ 75 (299)
T 2z2n_A 16 GPYGITVSDKGK-VWITQ--------HKANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEVWFTE-N------ 75 (299)
T ss_dssp CEEEEEECTTSC-EEEEE--------TTTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCEEEEE-T------
T ss_pred CccceEECCCCC-EEEEe--------cCCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCEEEeC-C------
Confidence 467788899997 44432 124579999988 665544321111 115578888999755533 0
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCC--C-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~--~-~~~~~~~~SpDGk~l 346 (958)
....|++++.+|+.+.+.. . .....++++|||+ |
T Consensus 76 ------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~-l 112 (299)
T 2z2n_A 76 ------------------------------------------AANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGD-I 112 (299)
T ss_dssp ------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSC-E
T ss_pred ------------------------------------------CCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCC-E
Confidence 1234777777554443321 2 4566788899986 4
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
++.... .+.+++++.++ ....+.... . ...+..+.+++||+ +++. .
T Consensus 113 ~v~~~~------------~~~i~~~d~~g-~~~~~~~~~-~----------~~~~~~i~~~~~g~-l~v~-~-------- 158 (299)
T 2z2n_A 113 WFTEMN------------GNRIGRITDDG-KIREYELPN-K----------GSYPSFITLGSDNA-LWFT-E-------- 158 (299)
T ss_dssp EEEETT------------TTEEEEECTTC-CEEEEECSS-T----------TCCEEEEEECTTSC-EEEE-E--------
T ss_pred EEEecC------------CceEEEECCCC-CEEEecCCC-C----------CCCCceEEEcCCCC-EEEE-e--------
Confidence 444321 23788888844 333322110 0 02346788999985 4332 1
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEe--eccccCceeeecCCceEEEEEeccccceEEEEEcC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
...+.|++++. + ++...+.. .......++++++|+ |++..... ..|+++++
T Consensus 159 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~---~~i~~~~~ 211 (299)
T 2z2n_A 159 ---NQNNAIGRITE---S-GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIG---NKIGRITT 211 (299)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT---TEEEEECT
T ss_pred ---CCCCEEEEEcC---C-CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCC---ceEEEECC
Confidence 22457888873 3 34433311 122344678899987 44443222 46899998
No 470
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.12 E-value=0.00065 Score=81.56 Aligned_cols=188 Identities=10% Similarity=0.038 Sum_probs=116.6
Q ss_pred ceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCc----eEEEeccCCcc
Q 002164 314 TQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI----FVRELCDLPLA 387 (958)
Q Consensus 314 ~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~----~~~~l~~~~~~ 387 (958)
..|..+++ .+....+... .....++|++.+.+|+++... .+.|+.+++++. ..+.+....
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~------------~~~I~~~~l~g~~~~~~~~~vi~~~-- 469 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD-- 469 (791)
T ss_dssp SSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECSS--
T ss_pred cceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeecc------------ceeEEEEeccCCCCCcceeEEEecC--
Confidence 45778888 4555555444 556678899888888887633 247888888863 222222211
Q ss_pred ccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec-cccCceeeecC
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD-LRYGGISWCDD 466 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~-~~~~~~~~spD 466 (958)
...+.++++.+.++.||+. + ...+.|+++++ +|...+.|.... .....+++.|.
T Consensus 470 ----------l~~P~GLAvD~~~~~LY~t-D-----------~~~~~I~v~~l---dG~~~~~l~~~~l~~P~gIaVDp~ 524 (791)
T 3m0c_C 470 ----------IQAPDGLAVDWIHSNIYWT-D-----------SVLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDPV 524 (791)
T ss_dssp ----------CSCCCEEEEETTTTEEEEE-E-----------TTTTEEEEEET---TSSSEEEEEECTTCCEEEEEEETT
T ss_pred ----------CCCcceeeeeecCCcEEEE-e-----------cCCCeEEEEeC---CCCeEEEEEeCCCCCcceEEEecC
Confidence 1345678898888877663 2 23557899985 777666664432 23567899999
Q ss_pred CceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCC
Q 002164 467 SLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGAT 546 (958)
Q Consensus 467 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~ 546 (958)
+..|+++.+... .+|+++++++. ..+.+.........+ +++.+++.+|++...
T Consensus 525 ~g~LYwtD~g~~--~~I~~~~~dG~--~~~~lv~~~l~~P~G------LavD~~~~~LYwaD~----------------- 577 (791)
T 3m0c_C 525 HGFMYWTDWGTP--AKIKKGGLNGV--DIYSLVTENIQWPNG------ITLDLLSGRLYWVDS----------------- 577 (791)
T ss_dssp TTEEEEEECSSS--CEEEEEETTSC--CEEEEECSSCSCEEE------EEEETTTTEEEEEET-----------------
T ss_pred CCCEEEecCCCC--CeEEEEecCCC--ceEEEEeCCCCCceE------EEEecCCCeEEEEeC-----------------
Confidence 889998865442 57999999884 333333222111111 567777777777641
Q ss_pred CCCCCCeEEEEECCCCceEEEecC
Q 002164 547 PEGNIPFLDLFDINTGSKERIWES 570 (958)
Q Consensus 547 ~~~~~~~L~~~dl~~g~~~~l~~~ 570 (958)
....|+++++++...+.+...
T Consensus 578 ---~~~~I~~~d~dG~~~~~v~~~ 598 (791)
T 3m0c_C 578 ---KLHSISSIDVNGGNRKTILED 598 (791)
T ss_dssp ---TTTEEEEEETTSCSCEEEEEC
T ss_pred ---CCCcEEEEecCCCceEEEecC
Confidence 123699999987777666543
No 471
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.11 E-value=1.1e-05 Score=73.96 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=46.0
Q ss_pred HCCcEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhCCC
Q 002164 710 ARGFAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHAPH 782 (958)
Q Consensus 710 ~~G~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~ 782 (958)
+++|.|+. .+.+|+|.+...........+|+.+.++.+ +.+++.++|||+||.+++.++.++|.
T Consensus 40 ~~~~~v~~---~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 40 PEGYAFYL---LDLPGYGRTEGPRMAPEELAHFVAGFAVMM------NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CTTSEEEE---ECCTTSTTCCCCCCCHHHHHHHHHHHHHHT------TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred hCCcEEEE---ECCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 34599999 566677777544322455556665555543 34589999999999999999999875
No 472
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.09 E-value=0.00045 Score=72.29 Aligned_cols=80 Identities=15% Similarity=0.003 Sum_probs=47.1
Q ss_pred eceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccc
Q 002164 163 TGIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYL 242 (958)
Q Consensus 163 ~~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~ 242 (958)
..|++++.++ | ....++.. ........+.++|||+.|+ +. ...|+.++.++....++.......
T Consensus 15 ~~v~~~d~~t-G--~~~w~~~~-~~~~~~~~~~~~pdG~ilv-s~----------~~~V~~~d~~G~~~W~~~~~~~~~- 78 (276)
T 3no2_A 15 NKIAIINKDT-K--EIVWEYPL-EKGWECNSVAATKAGEILF-SY----------SKGAKMITRDGRELWNIAAPAGCE- 78 (276)
T ss_dssp SEEEEEETTT-T--EEEEEEEC-CTTCCCCEEEECTTSCEEE-EC----------BSEEEEECTTSCEEEEEECCTTCE-
T ss_pred CEEEEEECCC-C--eEEEEeCC-CccCCCcCeEECCCCCEEE-eC----------CCCEEEECCCCCEEEEEcCCCCcc-
Confidence 4678888644 3 22334331 1112467788999998665 22 346888888443334433211111
Q ss_pred cccccceEEecCCeEEEEE
Q 002164 243 NAIFDNFVWVNNSTLLVCT 261 (958)
Q Consensus 243 ~~~~~~~~wspDG~~l~~~ 261 (958)
+..+.+++||+.|+..
T Consensus 79 ---~~~~~~~~dG~~lv~~ 94 (276)
T 3no2_A 79 ---MQTARILPDGNALVAW 94 (276)
T ss_dssp ---EEEEEECTTSCEEEEE
T ss_pred ---ccccEECCCCCEEEEe
Confidence 5577899999988865
No 473
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.07 E-value=0.013 Score=68.62 Aligned_cols=123 Identities=4% Similarity=-0.133 Sum_probs=70.2
Q ss_pred CceeeecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEE
Q 002164 459 GGISWCDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYI 538 (958)
Q Consensus 459 ~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~ 538 (958)
..+.|.+.+..|+++.... .+|+++++++. ....+.........+ +++...++.|++...
T Consensus 352 ~~ld~d~~~~~ly~sD~~~---~~I~r~~~~g~--~~~~v~~~~~~~p~G------lAvD~~~~~lY~tD~--------- 411 (619)
T 3s94_A 352 IAIDYDPVEGYIYWTDDEV---RAIRRSFIDGS--GSQFVVTAQIAHPDG------IAVDWVARNLYWTDT--------- 411 (619)
T ss_dssp EEEEEETTTTEEEEEETTT---TEEEEEETTSC--SCEEEECSSCSCCCE------EEEETTTTEEEEEET---------
T ss_pred EEEEEEcCCCeEEEEeCCC---CeEEEEEcCCC--ccEEEEECCCCCcCc------eEEecccCcEEEEeC---------
Confidence 3467888788888875332 46999998874 223332221111111 455555666666541
Q ss_pred EEccCCCCCCCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCC
Q 002164 539 LLNGNGATPEGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPD 618 (958)
Q Consensus 539 ~~~~~~~~~~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~ 618 (958)
....|.+.++++...+.|....- ..+. ..++.|....++++-.+. .+.|++.++++
T Consensus 412 -----------~~~~I~v~~~~G~~~~~l~~~~l----~~P~-------~iavdp~~G~ly~tD~g~--~~~I~r~~~dG 467 (619)
T 3s94_A 412 -----------GTDRIEVTRLNGTMRKILISEDL----EEPR-------AIVLDPMVGYMYWTDWGE--IPKIERAALDG 467 (619)
T ss_dssp -----------TTTEEEEEETTSCSCEEEECTTC----CSEE-------EEEEETTTTEEEEEECSS--SCEEEEEETTS
T ss_pred -----------CCCcEEEEeCCCCeEEEEEECCC----CCee-------eEEEEcCCCcEEEecCCC--CCEEEEEccCC
Confidence 12368888887766555543221 1112 235666666777766543 56799998877
Q ss_pred CCeeEee
Q 002164 619 KKSCQIT 625 (958)
Q Consensus 619 g~~~~Lt 625 (958)
...+.|.
T Consensus 468 ~~~~~l~ 474 (619)
T 3s94_A 468 SDRVVLV 474 (619)
T ss_dssp CSCEEEE
T ss_pred CccEEEE
Confidence 6655554
No 474
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.02 E-value=0.00084 Score=71.45 Aligned_cols=242 Identities=14% Similarity=0.076 Sum_probs=122.1
Q ss_pred eeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEE
Q 002164 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (958)
Q Consensus 180 ~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~ 259 (958)
+.+..++.+.....++|+|||+ |+++.. ....|++++.+++....+ ..+.. ...+++++||+ |+
T Consensus 23 ~~~~~~p~~~~pegia~~~~g~-lyv~d~--------~~~~I~~~d~~g~~~~~~-~~~~~-----p~gia~~~dG~-l~ 86 (306)
T 2p4o_A 23 KIITSFPVNTFLENLASAPDGT-IFVTNH--------EVGEIVSITPDGNQQIHA-TVEGK-----VSGLAFTSNGD-LV 86 (306)
T ss_dssp EEEEEECTTCCEEEEEECTTSC-EEEEET--------TTTEEEEECTTCCEEEEE-ECSSE-----EEEEEECTTSC-EE
T ss_pred eEeEeCCCCCCcceEEECCCCC-EEEEeC--------CCCeEEEECCCCceEEEE-eCCCC-----ceeEEEcCCCc-EE
Confidence 3333344334566789999987 555431 256899999887543322 22221 55788999998 44
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCeeeecCCC---cccc
Q 002164 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTVKEIGPP---AVYT 335 (958)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~~~l~~~---~~~~ 335 (958)
++.... ...+|+.++. +|+.+.+... ....
T Consensus 87 vad~~~----------------------------------------------~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 120 (306)
T 2p4o_A 87 ATGWNA----------------------------------------------DSIPVVSLVKSDGTVETLLTLPDAIFLN 120 (306)
T ss_dssp EEEECT----------------------------------------------TSCEEEEEECTTSCEEEEEECTTCSCEE
T ss_pred EEeccC----------------------------------------------CcceEEEEcCCCCeEEEEEeCCCccccC
Confidence 441000 1124777776 7766554321 1112
Q ss_pred ccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCC-ccccCcccccccccCcceeeeecCCCCce
Q 002164 336 SLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLP-LAEDIPIAFNSVRKGMRSINWRSDKPSTL 414 (958)
Q Consensus 336 ~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~-~~~~~p~~~~~~~~~~~~~~~spDG~~l~ 414 (958)
.++..+++ .+++.... .+.|+.+|.+++..+.....+ .....+. ........+ +|||+.|+
T Consensus 121 g~~~~~~~-~~~v~d~~------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~---~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 121 GITPLSDT-QYLTADSY------------RGAIWLIDVVQPSGSIWLEHPMLARSNSE---SVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEESSSS-EEEEEETT------------TTEEEEEETTTTEEEEEEECGGGSCSSTT---CCSCSEEEE--EEETTEEE
T ss_pred cccccCCC-cEEEEECC------------CCeEEEEeCCCCcEeEEEECCcccccccc---CCCCcCCCc--CcCCCEEE
Confidence 22333444 44443311 348888888754322211000 0000000 000122334 89998877
Q ss_pred EEEEeccCCCcccccccCCeEEEEeCCCCCCC--CceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCCC
Q 002164 415 YWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE--GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSKD 492 (958)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~--~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~~ 492 (958)
+. + ...+.|++++.+. ++. ..+.+.. ......+++++||+ |+ .++... .+|++++.++
T Consensus 183 v~-d-----------~~~~~I~~~~~~~-~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~-va~~~~--~~V~~~~~~G-- 242 (306)
T 2p4o_A 183 VS-N-----------TEKMLLLRIPVDS-TDKPGEPEIFVE-QTNIDDFAFDVEGN-LY-GATHIY--NSVVRIAPDR-- 242 (306)
T ss_dssp EE-E-----------TTTTEEEEEEBCT-TSCBCCCEEEEE-SCCCSSEEEBTTCC-EE-EECBTT--CCEEEECTTC--
T ss_pred EE-e-----------CCCCEEEEEEeCC-CCCCCccEEEec-cCCCCCeEECCCCC-EE-EEeCCC--CeEEEECCCC--
Confidence 73 1 2356789998621 121 1222222 23456789999995 44 444333 4588898764
Q ss_pred CCcEEEecc--CCccccCCCCCCceEec---cCCceEEEEe
Q 002164 493 VAPRILFDR--SSEDVYSDPGSPMMRRT---STGTYVIAKI 528 (958)
Q Consensus 493 ~~~~~~~~~--~~~~~~~~~~~~~~~~s---pdG~~l~~~~ 528 (958)
+...+... ......+ ++|. ||+++|+...
T Consensus 243 -~~~~~~~~~~~~~~p~~------~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 243 -STTIIAQAEQGVIGSTA------VAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp -CEEEEECGGGTCTTEEE------EEECCSTTTTTEEEEEE
T ss_pred -CEEEEeecccccCCceE------EEEecccCCCCEEEEEC
Confidence 22222111 1111111 5677 7888777665
No 475
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.01 E-value=0.0013 Score=77.08 Aligned_cols=189 Identities=11% Similarity=0.003 Sum_probs=123.8
Q ss_pred CeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCc
Q 002164 201 KHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPK 280 (958)
Q Consensus 201 ~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~ 280 (958)
..|+|+. ...|.++++++.....+....... ....++|.+++..|+++-.
T Consensus 7 ~~Ll~s~----------~~~I~~i~l~~~~~~~~~~~~~~~---~~~~l~~d~~~~~lywtD~----------------- 56 (628)
T 4a0p_A 7 AFLLFSR----------RADIRRISLETNNNNVAIPLTGVK---EASALDFDVTDNRIYWTDI----------------- 56 (628)
T ss_dssp CEEEEEE----------TTEEEEEESSCTTCEEECCCCSCS---CEEEEEEETTTTEEEEEET-----------------
T ss_pred cEEEEEe----------CCcEEEEECCCCCcceEEEcCCCC---ceEEEEEECCCCEEEEEEC-----------------
Confidence 3678864 568999999986544333222210 0457889998888887610
Q ss_pred eeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCC-eeeecC-CC-ccccccccCCCCcEEEEEeecCCccc
Q 002164 281 MQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDG-TVKEIG-PP-AVYTSLDPSPDEKYILISSIHRPYSF 357 (958)
Q Consensus 281 ~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~l~-~~-~~~~~~~~SpDGk~l~~~~~~~~~~~ 357 (958)
....|++++++| ..+.+. .+ .....+++.+.++.|+++...
T Consensus 57 -------------------------------~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~----- 100 (628)
T 4a0p_A 57 -------------------------------SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG----- 100 (628)
T ss_dssp -------------------------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT-----
T ss_pred -------------------------------CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC-----
Confidence 234688888844 333333 23 445667788788888887532
Q ss_pred cccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEE
Q 002164 358 IVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYT 437 (958)
Q Consensus 358 ~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~ 437 (958)
.+.|.+.+++|+..+.|..... ..++.+++.|....|++ ++. +....|++
T Consensus 101 -------~~~I~v~~~dG~~~~~l~~~~l------------~~P~~iavdp~~G~lY~-tD~----------g~~~~I~r 150 (628)
T 4a0p_A 101 -------TNRIEVSKLDGQHRQVLVWKDL------------DSPRALALDPAEGFMYW-TEW----------GGKPKIDR 150 (628)
T ss_dssp -------TTEEEEEETTSTTCEEEECSSC------------CCEEEEEEETTTTEEEE-EEC----------SSSCEEEE
T ss_pred -------CCEEEEEecCCCcEEEEEeCCC------------CCcccEEEccCCCeEEE-eCC----------CCCCEEEE
Confidence 3489999999876665543211 24578999987666554 332 22457899
Q ss_pred EeCCCCCCCCceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCCC
Q 002164 438 QQAEPVQGEGPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGSK 491 (958)
Q Consensus 438 ~~~~~~~g~~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~~ 491 (958)
++. +|...+.+...-....+++++++++.|+++.... ..|+.+++++.
T Consensus 151 ~~~---dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~---~~I~~~d~dG~ 198 (628)
T 4a0p_A 151 AAM---DGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDT---NLIESSNMLGL 198 (628)
T ss_dssp EET---TSCSCEEEECSCSSEEEEEEETTTTEEEEEETTT---TEEEEEETTSC
T ss_pred EeC---CCCceEEEECCCCCcceEEEccccCEEEEEECCC---CEEEEEcCCCC
Confidence 885 7777777654333456789999999998875332 57999999885
No 476
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.97 E-value=0.00052 Score=70.40 Aligned_cols=199 Identities=11% Similarity=0.002 Sum_probs=114.2
Q ss_pred ccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCC
Q 002164 191 LNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPP 270 (958)
Q Consensus 191 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~ 270 (958)
.....|+||| +|+.+.. ..+...|.++|+++|+..+-...+... .....+.+|+.|+.+..
T Consensus 23 ~~Gl~~~~dg-~Lyvstg------~~~~s~v~~iD~~tg~v~~~i~l~~~~-----fgeGi~~~g~~lyv~t~------- 83 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTG------LYGRSSVRQVALQTGKVENIHKMDDSY-----FGEGLTLLNEKLYQVVW------- 83 (266)
T ss_dssp EEEEEECSTT-EEEEEEC------STTTCEEEEEETTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEET-------
T ss_pred cccEEEeCCC-eEEEECC------CCCCCEEEEEECCCCCEEEEEecCCCc-----ceEEEEEeCCEEEEEEe-------
Confidence 3567899996 5555431 234679999999999876654333321 12234445667776610
Q ss_pred CCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCee-eecCCCccccccccCCCCcEEEE
Q 002164 271 KKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGTV-KEIGPPAVYTSLDPSPDEKYILI 348 (958)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~~-~~l~~~~~~~~~~~SpDGk~l~~ 348 (958)
....++++|. +++. ..+.-+ ......+++||+++++
T Consensus 84 -----------------------------------------~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~v 121 (266)
T 2iwa_A 84 -----------------------------------------LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYG 121 (266)
T ss_dssp -----------------------------------------TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEE
T ss_pred -----------------------------------------cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEE
Confidence 2356889998 7643 344322 1223457889999886
Q ss_pred EeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc
Q 002164 349 SSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV 427 (958)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~ 427 (958)
+. . .+.++++|.++.+ .+.+..... ..|. .....+.|. || .++..
T Consensus 122 s~-g------------s~~l~viD~~t~~v~~~I~Vg~~--~~p~------~~~nele~~-dg-~lyvn----------- 167 (266)
T 2iwa_A 122 SD-G------------TSILYEIDPHTFKLIKKHNVKYN--GHRV------IRLNELEYI-NG-EVWAN----------- 167 (266)
T ss_dssp EC-S------------SSEEEEECTTTCCEEEEEECEET--TEEC------CCEEEEEEE-TT-EEEEE-----------
T ss_pred EC-C------------CCeEEEEECCCCcEEEEEEECCC--Cccc------ccceeEEEE-CC-EEEEe-----------
Confidence 53 2 2489999988644 333332110 0111 122356677 66 34331
Q ss_pred ccccCCeEEEEeCCCCCCCCceEEEeec-------------cccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 428 EVTPRDIIYTQQAEPVQGEGPEILHKLD-------------LRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 428 ~~~~~~~l~~~~~~~~~g~~~~~l~~~~-------------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
....+.|.++|. .++.....+.-.. ....+++|+||+++++.+.... .+|+.+++..
T Consensus 168 -~~~~~~V~vID~--~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~---~~v~~i~l~~ 237 (266)
T 2iwa_A 168 -IWQTDCIARISA--KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW---PKLFEIKLHL 237 (266)
T ss_dssp -ETTSSEEEEEET--TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---SEEEEEEEEE
T ss_pred -cCCCCeEEEEEC--CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC---CeEEEEEEec
Confidence 134568999995 3333334443211 1225789999999877764332 4688887655
No 477
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.95 E-value=0.0014 Score=71.01 Aligned_cols=143 Identities=9% Similarity=0.046 Sum_probs=76.6
Q ss_pred eEEEEEcCCeeeecCC-------C-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCC
Q 002164 315 QLVLVSLDGTVKEIGP-------P-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLP 385 (958)
Q Consensus 315 ~l~~~~~~g~~~~l~~-------~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~ 385 (958)
.|+.++ +|+...+.. . ..+..++++|||+ |++...... ......|.+||+++++ .+.+.. +
T Consensus 43 ~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~-------~~~~~~i~~~d~~tg~~~~~~~~-~ 112 (343)
T 2qe8_A 43 QVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQ-------SKSVPKLVAWDTLNNQLSRVIYL-P 112 (343)
T ss_dssp SEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHH-------HTSCCEEEEEETTTTEEEEEEEC-C
T ss_pred EEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCC-------cCCCCeEEEEECCCCeEEEEEEC-C
Confidence 466666 665543321 1 3456788999987 444432200 0012389999998766 344322 1
Q ss_pred ccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee-----------
Q 002164 386 LAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL----------- 454 (958)
Q Consensus 386 ~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~----------- 454 (958)
.....+ ......++++|++..+++ ++... .....|++++. .+++...+...
T Consensus 113 ~~~~~~------~~~~~~v~vd~~~g~~yv-td~~~--------~~~~~i~v~d~---~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 113 PPITLS------NSFVNDLAVDLIHNFVYI-SDPAP--------DDKAALIRVDL---QTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp TTTSCT------TCCCCEEEEETTTTEEEE-EECCS--------GGGCEEEEEET---TTCCEEEECTTCTTTSCCSCCC
T ss_pred hhhccc------ccccceEEEecCCCEEEE-EcCcc--------CCCCeEEEEEC---CCCCEEEEecCCCcccccccce
Confidence 110001 123467899987665555 32210 02346777774 33332222100
Q ss_pred -------------------ccccCceeeecCCceEEEEEeccccceEEEEEcC
Q 002164 455 -------------------DLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 455 -------------------~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
.....+++|||||+.|++..... .+||.++.
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~---~~l~~~~~ 224 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS---TSMYRIKS 224 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC---SEEEEEEH
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC---CeEEEEEH
Confidence 01135689999999998875433 47999875
No 478
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.95 E-value=0.0005 Score=70.57 Aligned_cols=181 Identities=9% Similarity=-0.026 Sum_probs=99.7
Q ss_pred cceEEEEEc-CCeeee-cCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE-EEeccCCcccc
Q 002164 313 TTQLVLVSL-DGTVKE-IGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV-RELCDLPLAED 389 (958)
Q Consensus 313 ~~~l~~~~~-~g~~~~-l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~-~~l~~~~~~~~ 389 (958)
.+.|..+|+ +|+... +.-+.......++++|++|+..... .+.++++|.++.+. ..+...
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~------------~~~v~viD~~t~~v~~~i~~g----- 105 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL------------KNIGFIYDRRTLSNIKNFTHQ----- 105 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT------------CSEEEEEETTTTEEEEEEECC-----
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec------------CCEEEEEECCCCcEEEEEECC-----
Confidence 467999999 886443 2212111222345567888877633 35899999986543 333221
Q ss_pred CcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeecc-----ccCceeee
Q 002164 390 IPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL-----RYGGISWC 464 (958)
Q Consensus 390 ~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~-----~~~~~~~s 464 (958)
.......++||++++.. ...+.|+++|. ...+....+.-... ....+.|.
T Consensus 106 ----------~~~g~glt~Dg~~l~vs-------------~gs~~l~viD~--~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 106 ----------MKDGWGLATDGKILYGS-------------DGTSILYEIDP--HTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp ----------SSSCCEEEECSSSEEEE-------------CSSSEEEEECT--TTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred ----------CCCeEEEEECCCEEEEE-------------CCCCeEEEEEC--CCCcEEEEEEECCCCcccccceeEEEE
Confidence 01245588899998873 23567999985 22233444432211 23356777
Q ss_pred cCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCC---c---cccCCCCCC-ceEeccCCceEEEEeeeccCCCcE
Q 002164 465 DDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS---E---DVYSDPGSP-MMRRTSTGTYVIAKIKKENDEGTY 537 (958)
Q Consensus 465 pDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~-~~~~spdG~~l~~~~~~~~~~~~~ 537 (958)
|| .|+...+.. ..|.++|+.++.. ....+... . ........| -++|+|+|++++...+
T Consensus 161 -dg-~lyvn~~~~---~~V~vID~~tg~V--~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk-------- 225 (266)
T 2iwa_A 161 -NG-EVWANIWQT---DCIARISAKDGTL--LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK-------- 225 (266)
T ss_dssp -TT-EEEEEETTS---SEEEEEETTTCCE--EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET--------
T ss_pred -CC-EEEEecCCC---CeEEEEECCCCcE--EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC--------
Confidence 66 555443333 4799999998632 22222110 0 000000000 1789999988776652
Q ss_pred EEEccCCCCCCCCCCeEEEEECCCC
Q 002164 538 ILLNGNGATPEGNIPFLDLFDINTG 562 (958)
Q Consensus 538 ~~~~~~~~~~~~~~~~L~~~dl~~g 562 (958)
..+.|+++++...
T Consensus 226 ------------~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 226 ------------LWPKLFEIKLHLV 238 (266)
T ss_dssp ------------TCSEEEEEEEEEC
T ss_pred ------------CCCeEEEEEEecc
Confidence 2457888887543
No 479
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.95 E-value=0.0035 Score=65.84 Aligned_cols=193 Identities=13% Similarity=0.061 Sum_probs=107.7
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
......+++||+ |+++. .+...|++++.+ |+.+.+...... .....+++.++|++.+...
T Consensus 63 ~~~~i~~~~~g~-l~v~~--------~~~~~v~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~------- 122 (300)
T 2qc5_A 63 KVMCLIVSSLGD-IWFTE--------NGANKIGKLSKK-GGFTEYPLPQPD---SGPYGITEGLNGDIWFTQL------- 122 (300)
T ss_dssp CEEEEEECTTSC-EEEEE--------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECSTTCEEEEET-------
T ss_pred cceeEEECCCCC-EEEEe--------cCCCeEEEECCC-CCeEEecCCCCC---CCCccceECCCCCEEEEcc-------
Confidence 466778899986 44432 124579999988 555443321111 1155778888887544320
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeec--CCC-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEI--GPP-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l--~~~-~~~~~~~~SpDGk~l 346 (958)
....|++++.+|+...+ ... .....+++++||+ |
T Consensus 123 ------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~-l 159 (300)
T 2qc5_A 123 ------------------------------------------NGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA-L 159 (300)
T ss_dssp ------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-E
T ss_pred ------------------------------------------CCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCC-E
Confidence 12357777775544433 212 4566788999998 5
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
++.... .+.|++++.++. ...+.. +.. ...+..+.+++||+ +++. .
T Consensus 160 ~v~~~~------------~~~i~~~~~~g~-~~~~~~-~~~----------~~~~~~i~~d~~g~-l~v~-~-------- 205 (300)
T 2qc5_A 160 WFTENQ------------NNSIGRITNTGK-LEEYPL-PTN----------AAAPVGITSGNDGA-LWFV-E-------- 205 (300)
T ss_dssp EEEETT------------TTEEEEECTTCC-EEEEEC-SST----------TCCEEEEEECTTSS-EEEE-E--------
T ss_pred EEEecC------------CCeEEEECCCCc-EEEeeC-CCC----------CCCcceEEECCCCC-EEEE-c--------
Confidence 555422 237888888543 333221 110 02346788899884 4442 1
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEe--eccccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
...+.|++++. + ++...... .......++++++|+ |+++.... ..|+++++++
T Consensus 206 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~---~~i~~~~~~g 260 (300)
T 2qc5_A 206 ---IMGNKIGRITT---T-GEISEYDIPTPNARPHAITAGKNSE-IWFTEWGA---NQIGRITNDN 260 (300)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTT---TEEEEECTTS
T ss_pred ---cCCCEEEEEcC---C-CcEEEEECCCCCCCceEEEECCCCC-EEEeccCC---CeEEEECCCC
Confidence 12346888873 3 33333321 122345678899987 55543222 4688998843
No 480
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.90 E-value=0.0039 Score=73.16 Aligned_cols=222 Identities=9% Similarity=0.002 Sum_probs=136.2
Q ss_pred cceEEEEEc-CCeeee-cC-CC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccc
Q 002164 313 TTQLVLVSL-DGTVKE-IG-PP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAE 388 (958)
Q Consensus 313 ~~~l~~~~~-~g~~~~-l~-~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~ 388 (958)
...|..+++ +..... +. .+ .....++|++++..|+++... .+.|+.++++|+..+.+.....
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~------------~~~I~r~~~~g~~~~~v~~~g~-- 79 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS------------LKTISRAFMNGSALEHVVEFGL-- 79 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC--
T ss_pred CCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC------------CCeEEEEECCCCCcEEEEeCCC--
Confidence 356889999 433322 21 12 456678999999999888633 3488899998766555443211
Q ss_pred cCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee-ccccCceeeecCC
Q 002164 389 DIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL-DLRYGGISWCDDS 467 (958)
Q Consensus 389 ~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~-~~~~~~~~~spDg 467 (958)
..+.++++.+.+..|++. + ...+.|.+.++ +|+..+.+... -.....++..|..
T Consensus 80 ----------~~P~GlAvD~~~~~LY~t-D-----------~~~~~I~v~~~---dG~~~~~l~~~~l~~P~~iavdp~~ 134 (628)
T 4a0p_A 80 ----------DYPEGMAVDWLGKNLYWA-D-----------TGTNRIEVSKL---DGQHRQVLVWKDLDSPRALALDPAE 134 (628)
T ss_dssp ----------SCCCEEEEETTTTEEEEE-E-----------TTTTEEEEEET---TSTTCEEEECSSCCCEEEEEEETTT
T ss_pred ----------CCcceEEEEeCCCEEEEE-E-----------CCCCEEEEEec---CCCcEEEEEeCCCCCcccEEEccCC
Confidence 234578888888877663 2 23467889885 77666666432 2234568899988
Q ss_pred ceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCCccccCCCCCCceEeccCCceEEEEeeeccCCCcEEEEccCCCCC
Q 002164 468 LALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSSEDVYSDPGSPMMRRTSTGTYVIAKIKKENDEGTYILLNGNGATP 547 (958)
Q Consensus 468 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~~~~~~~~~~~~~~~ 547 (958)
..|+++.+.. ..+|+++++++. ....+.+. .....+ ++++++++.|++...
T Consensus 135 G~lY~tD~g~--~~~I~r~~~dG~--~~~~l~~~-~~~P~G------lalD~~~~~LY~aD~------------------ 185 (628)
T 4a0p_A 135 GFMYWTEWGG--KPKIDRAAMDGS--ERTTLVPN-VGRANG------LTIDYAKRRLYWTDL------------------ 185 (628)
T ss_dssp TEEEEEECSS--SCEEEEEETTSC--SCEEEECS-CSSEEE------EEEETTTTEEEEEET------------------
T ss_pred CeEEEeCCCC--CCEEEEEeCCCC--ceEEEECC-CCCcce------EEEccccCEEEEEEC------------------
Confidence 8898886543 368999999985 33444321 111111 678888888887752
Q ss_pred CCCCCeEEEEECCCCceEEEecCCcccccceeEeecCCCccccccccCCEEEEEEecCCCCceEEEEECCCCCe
Q 002164 548 EGNIPFLDLFDINTGSKERIWESDKEKYYETTVALMSDQTEGDLYLNQLKILTSKESKTENTQYYIQSWPDKKS 621 (958)
Q Consensus 548 ~~~~~~L~~~dl~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~s~~~p~~~~~~d~~~g~~ 621 (958)
....|+.+|++++..+.+.. ... ....++.++..++++.. ....|++++..+|+.
T Consensus 186 --~~~~I~~~d~dG~~~~v~~~-~l~-------------~P~glav~~~~ly~tD~---~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 186 --DTNLIESSNMLGLNREVIAD-DLP-------------HPFGLTQYQDYIYWTDW---SRRSIERANKTSGQN 240 (628)
T ss_dssp --TTTEEEEEETTSCSCEEEEE-CCS-------------CEEEEEEETTEEEEEET---TTTEEEEEETTTCCS
T ss_pred --CCCEEEEEcCCCCceEEeec-cCC-------------CceEEEEECCEEEEecC---CCCEEEEEECCCCCc
Confidence 12368999998766543322 111 01223444556665542 345688888766653
No 481
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.90 E-value=0.0019 Score=69.95 Aligned_cols=153 Identities=12% Similarity=0.032 Sum_probs=81.7
Q ss_pred cceEEEEEc-CCe-eeecCCC-------ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEecc
Q 002164 313 TTQLVLVSL-DGT-VKEIGPP-------AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD 383 (958)
Q Consensus 313 ~~~l~~~~~-~g~-~~~l~~~-------~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~ 383 (958)
..+|+++|+ +|+ .+.+.-+ .....++++|++..++++..... ....|.+||++++...++..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~---------~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD---------DKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG---------GGCEEEEEETTTCCEEEECT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC---------CCCeEEEEECCCCCEEEEec
Confidence 356999998 786 3333211 23467789988777776643100 12489999998655444322
Q ss_pred C-Ccccc--Ccccccc--------------cccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCC
Q 002164 384 L-PLAED--IPIAFNS--------------VRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE 446 (958)
Q Consensus 384 ~-~~~~~--~p~~~~~--------------~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 446 (958)
. +.... .....++ ...+...++|||||+.|++. + .....+|.++.+.+..+
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~-~-----------~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLS-P-----------MHSTSMYRIKSADLSNL 230 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEE-E-----------SSCSEEEEEEHHHHTCT
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEE-e-----------CCCCeEEEEEHHHhcCC
Confidence 1 11000 0000111 01245679999999988774 1 12347888873111111
Q ss_pred Cc--------eEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 447 GP--------EILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 447 ~~--------~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
.. ...........++++++||+ |+++...+ ..|++++..+
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~---~~V~~~d~~~ 278 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAH---SAIGVITSAD 278 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGG---TEEEEEETTT
T ss_pred CCChhhhhcceEecccCCCCceEEECCCCC-EEEEccCC---CeEEEEECCC
Confidence 10 01112223456789999985 55543332 4688999833
No 482
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.86 E-value=0.0016 Score=66.39 Aligned_cols=211 Identities=14% Similarity=0.166 Sum_probs=116.2
Q ss_pred eeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEE
Q 002164 180 IEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLV 259 (958)
Q Consensus 180 ~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~ 259 (958)
+.|.+.. ...+..+|.||++.|+.+.+ +...|+.+++++...+++.-..... .+.+++.++|.+++
T Consensus 20 ~~l~g~~--~~lSGla~~~~~~~L~aV~d--------~~~~I~~ld~~g~v~~~i~l~g~~D----~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 20 KEIAGIT--NNISSLTWSAQSNTLFSTIN--------KPAAIVEMTTNGDLIRTIPLDFVKD----LETIEYIGDNQFVI 85 (255)
T ss_dssp EECTTCC--SCEEEEEEETTTTEEEEEEE--------TTEEEEEEETTCCEEEEEECSSCSS----EEEEEECSTTEEEE
T ss_pred eECCCcc--cCcceeEEeCCCCEEEEEEC--------CCCeEEEEeCCCCEEEEEecCCCCC----hHHeEEeCCCEEEE
Confidence 4454443 35888999999988887664 3678999999854444442221111 56888999997444
Q ss_pred EEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc--CCe---eeec------
Q 002164 260 CTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGT---VKEI------ 328 (958)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~--~g~---~~~l------ 328 (958)
.. + +..+|+++++ .+. ...+
T Consensus 86 s~-----------------------E--------------------------~~~~l~~~~v~~~~~i~~~~~~~~~~~~ 116 (255)
T 3qqz_A 86 SD-----------------------E--------------------------RDYAIYVISLTPNSEVKILKKIKIPLQE 116 (255)
T ss_dssp EE-----------------------T--------------------------TTTEEEEEEECTTCCEEEEEEEECCCSS
T ss_pred EE-----------------------C--------------------------CCCcEEEEEcCCCCeeeeeeeecccccc
Confidence 22 0 1233555554 221 1111
Q ss_pred CC-CccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEe--ccCceEEEeccCCccccCcccccccccCcceee
Q 002164 329 GP-PAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWT--TDGIFVRELCDLPLAEDIPIAFNSVRKGMRSIN 405 (958)
Q Consensus 329 ~~-~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d--~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~ 405 (958)
.. ..++..++|+|++++|++...+.+ ..++.++ +.+...+.+......... ......+++
T Consensus 117 ~~~N~g~EGLA~d~~~~~L~va~E~~p-----------~~i~~~~g~~~~~~l~i~~~~~~~~~~------~~~d~S~l~ 179 (255)
T 3qqz_A 117 SPTNCGFEGLAYSRQDHTFWFFKEKNP-----------IEVYKVNGLLSSNELHISKDKALQRQF------TLDDVSGAE 179 (255)
T ss_dssp CCCSSCCEEEEEETTTTEEEEEEESSS-----------EEEEEEESTTCSSCCEEEECHHHHHTC------CSSCCCEEE
T ss_pred ccccCCcceEEEeCCCCEEEEEECcCC-----------ceEEEEcccccCCceeeecchhhcccc------ccCCceeEE
Confidence 11 145678999999999998875532 2566665 112222221110000000 012357889
Q ss_pred eecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeecc---------ccCceeeecCCceEEEEEec
Q 002164 406 WRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLDL---------RYGGISWCDDSLALVYESWY 476 (958)
Q Consensus 406 ~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~~---------~~~~~~~spDg~~l~~~~~~ 476 (958)
+.|....+++.. .....|..+|. +|.....+.-..+ ...++++.++|+ |+..+ +
T Consensus 180 ~dp~tg~lliLS------------~~s~~L~~~d~---~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvs-E 242 (255)
T 3qqz_A 180 FNQQKNTLLVLS------------HESRALQEVTL---VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVS-E 242 (255)
T ss_dssp EETTTTEEEEEE------------TTTTEEEEECT---TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEE-T
T ss_pred EcCCCCeEEEEE------------CCCCeEEEEcC---CCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEc-C
Confidence 999877777652 23456777874 5543333321111 235689999996 55553 3
Q ss_pred cccceEEEEEcCCC
Q 002164 477 KTRRTRTWVISPGS 490 (958)
Q Consensus 477 ~~~~~~l~~~~~~~ 490 (958)
. ..+|++...+
T Consensus 243 ~---n~~y~f~~~~ 253 (255)
T 3qqz_A 243 P---NRFYRFTPQS 253 (255)
T ss_dssp T---TEEEEEEC--
T ss_pred C---ceEEEEEecC
Confidence 3 2588886544
No 483
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.86 E-value=1.7e-05 Score=83.62 Aligned_cols=69 Identities=17% Similarity=0.123 Sum_probs=44.5
Q ss_pred cEEEEcCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEeChHHHHHHHHHHhC---CCcee---E
Q 002164 713 FAILGGPTTPIIGEGDEEANDRFVEQLVACAEAAVEEVVRRGVAHPSKIAVGGHSYGAFMTANLLAHA---PHLFC---C 786 (958)
Q Consensus 713 ~~vl~~~~~~~~G~G~~~~~~~~~~~~~~D~~~av~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~---p~~~~---a 786 (958)
+.|+.++.. +. ..........+|+.+.++. . ...+++.++||||||.+|..+|.+. |+++. .
T Consensus 49 ~~v~~~d~~---~~----~~~~~~~~~a~~~~~~i~~---~--~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~ 116 (283)
T 3tjm_A 49 IPTYGLQCT---RA----APLDSIHSLAAYYIDCIRQ---V--QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 116 (283)
T ss_dssp SCEEEECCC---TT----SCCSCHHHHHHHHHHHHTT---T--CCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCE
T ss_pred ceEEEEecC---CC----CCCCCHHHHHHHHHHHHHH---h--CCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccce
Confidence 888885552 21 1112234555555444432 2 1125899999999999999999864 67788 8
Q ss_pred EEEeccC
Q 002164 787 GIARSGA 793 (958)
Q Consensus 787 ~v~~~~~ 793 (958)
++++++.
T Consensus 117 lvlid~~ 123 (283)
T 3tjm_A 117 LFLFDGS 123 (283)
T ss_dssp EEEESCC
T ss_pred EEEEcCC
Confidence 8888764
No 484
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.82 E-value=0.014 Score=61.08 Aligned_cols=193 Identities=16% Similarity=0.093 Sum_probs=106.9
Q ss_pred cccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCC
Q 002164 190 KLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDP 269 (958)
Q Consensus 190 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~ 269 (958)
....+.+++||+ |+++. .....|++++.+ ++...+...... ..+..+++.++|++.+.. .
T Consensus 21 ~p~~i~~d~~g~-l~v~~--------~~~~~v~~~~~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~-~------ 80 (300)
T 2qc5_A 21 GPYGITSSEDGK-VWFTQ--------HKANKISSLDQS-GRIKEFEVPTPD---AKVMCLIVSSLGDIWFTE-N------ 80 (300)
T ss_dssp CEEEEEECTTSC-EEEEE--------TTTTEEEEECTT-SCEEEEECSSTT---CCEEEEEECTTSCEEEEE-T------
T ss_pred CcceeeECCCCC-EEEEc--------CCCCeEEEECCC-CceEEEECCCCC---CcceeEEECCCCCEEEEe-c------
Confidence 456678899987 44432 125688999988 665543221110 115577888998754432 0
Q ss_pred CCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCeeeecCC--C-ccccccccCCCCcEE
Q 002164 270 PKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTVKEIGP--P-AVYTSLDPSPDEKYI 346 (958)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~l~~--~-~~~~~~~~SpDGk~l 346 (958)
....|++++.+|+.+.+.. . .....++++++|+.
T Consensus 81 ------------------------------------------~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l- 117 (300)
T 2qc5_A 81 ------------------------------------------GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDI- 117 (300)
T ss_dssp ------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCE-
T ss_pred ------------------------------------------CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCE-
Confidence 1234777776554443322 1 44567788899874
Q ss_pred EEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcc
Q 002164 347 LISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAK 426 (958)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~ 426 (958)
+++... .+.++.++.++ ..+.+.. +.. ...+..+.+++||+ +++. .
T Consensus 118 ~v~~~~------------~~~i~~~~~~g-~~~~~~~-~~~----------~~~~~~i~~d~~g~-l~v~-~-------- 163 (300)
T 2qc5_A 118 WFTQLN------------GDRIGKLTADG-TIYEYDL-PNK----------GSYPAFITLGSDNA-LWFT-E-------- 163 (300)
T ss_dssp EEEETT------------TTEEEEECTTS-CEEEEEC-SST----------TCCEEEEEECTTSS-EEEE-E--------
T ss_pred EEEccC------------CCeEEEECCCC-CEEEccC-CCC----------CCCceeEEECCCCC-EEEE-e--------
Confidence 444321 23788888873 3333221 100 02346788999998 4442 1
Q ss_pred cccccCCeEEEEeCCCCCCCCceEEEe--eccccCceeeecCCceEEEEEeccccceEEEEEcCCC
Q 002164 427 VEVTPRDIIYTQQAEPVQGEGPEILHK--LDLRYGGISWCDDSLALVYESWYKTRRTRTWVISPGS 490 (958)
Q Consensus 427 ~~~~~~~~l~~~~~~~~~g~~~~~l~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~~~ 490 (958)
...+.|++++. + ++...+.. .......+.++++|+ |+++.... ..|++++.++
T Consensus 164 ---~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~---~~i~~~~~~g 218 (300)
T 2qc5_A 164 ---NQNNSIGRITN---T-GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMG---NKIGRITTTG 218 (300)
T ss_dssp ---TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTT---TEEEEECTTC
T ss_pred ---cCCCeEEEECC---C-CcEEEeeCCCCCCCcceEEECCCCC-EEEEccCC---CEEEEEcCCC
Confidence 12456888873 3 33333321 122345678888885 55443322 3689998843
No 485
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=0.0031 Score=70.55 Aligned_cols=136 Identities=7% Similarity=0.036 Sum_probs=80.0
Q ss_pred ceeEEEccCCCCCCceeeeccCCCCCcccceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCce--eeccCCCCcc
Q 002164 164 GIGIHQLFPDGKLGQEIEIQGFPDGAKLNFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKA--RPLFQSPDIY 241 (958)
Q Consensus 164 ~l~i~~~~~dg~~~~~~~lt~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~--~~lt~~~~~~ 241 (958)
.|+.+++.. +..+.+.. .......++|++||++|+++... .+.....++.++.+++-. +.+.....
T Consensus 160 ~I~~id~~~----~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~----~~~~~~~v~~~~~~g~~~~~~~l~~~~~-- 227 (430)
T 3tc9_A 160 PTRLIDFEK----EYVSTVYS--GLSKVRTICWTHEADSMIITNDQ----NNNDRPNNYILTRESGFKVITELTKGQN-- 227 (430)
T ss_dssp EEEEEETTT----TEEEEEEC--CCSCEEEEEECTTSSEEEEEECC----SCTTSEEEEEEEGGGTSCSEEEEEECSS--
T ss_pred cEEEEECCC----CEEEEEec--CCCCcceEEEeCCCCEEEEEeCC----CCcccceEEEEeCCCceeeeeeeccCCC--
Confidence 566766633 33333321 22356788999999988776531 122234567777665432 22221111
Q ss_pred ccccccceEEecCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc
Q 002164 242 LNAIFDNFVWVNNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL 321 (958)
Q Consensus 242 ~~~~~~~~~wspDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 321 (958)
...+++.|++..|+++.. ...+|++++.
T Consensus 228 ----p~giavdp~~g~lyv~d~------------------------------------------------~~~~V~~~~~ 255 (430)
T 3tc9_A 228 ----CNGAETHPINGELYFNSW------------------------------------------------NAGQVFRYDF 255 (430)
T ss_dssp ----CCCEEECTTTCCEEEEET------------------------------------------------TTTEEEEEET
T ss_pred ----ceEEEEeCCCCEEEEEEC------------------------------------------------CCCEEEEEEC
Confidence 347888995445665510 2346899998
Q ss_pred -CCeeeecC-CC--ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccC
Q 002164 322 -DGTVKEIG-PP--AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG 375 (958)
Q Consensus 322 -~g~~~~l~-~~--~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~ 375 (958)
++....+. .. .....++|+|||++|++.... ...|+.++.++
T Consensus 256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~------------~~~I~~~~~d~ 301 (430)
T 3tc9_A 256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN------------QHYILRSDYDW 301 (430)
T ss_dssp TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT------------TTEEEEEEEET
T ss_pred CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC------------CCEEEEEeCCc
Confidence 55543332 11 345678999999988887633 34788888774
No 486
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.78 E-value=0.0011 Score=70.47 Aligned_cols=93 Identities=6% Similarity=0.045 Sum_probs=54.8
Q ss_pred CCCCcEEEEEeecCCccccccCCCCCceeEEEeccC-ceE---EEeccCCccccCcccccccccCcceeeeecCCCCceE
Q 002164 340 SPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDG-IFV---RELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 340 SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~-~~~---~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
+|||++|+++... .+.|+++++++ +.. +.+... ..+..+++++||+ |++
T Consensus 175 s~dg~~lyv~d~~------------~~~I~~~~~~~~g~~~~~~~~~~~--------------~~P~gi~vd~dG~-l~v 227 (306)
T 2p4o_A 175 KRFGNFLYVSNTE------------KMLLLRIPVDSTDKPGEPEIFVEQ--------------TNIDDFAFDVEGN-LYG 227 (306)
T ss_dssp EEETTEEEEEETT------------TTEEEEEEBCTTSCBCCCEEEEES--------------CCCSSEEEBTTCC-EEE
T ss_pred CcCCCEEEEEeCC------------CCEEEEEEeCCCCCCCccEEEecc--------------CCCCCeEECCCCC-EEE
Confidence 8999999887633 34899999874 221 111110 2356789999995 433
Q ss_pred EEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEeec---cccCceeee---cCCceEEEEEe
Q 002164 416 WAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKLD---LRYGGISWC---DDSLALVYESW 475 (958)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~~---~~~~~~~~s---pDg~~l~~~~~ 475 (958)
++ ...+.|++++. +| +...+.... .....++|+ ||++.|+.+..
T Consensus 228 -a~-----------~~~~~V~~~~~---~G-~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 228 -AT-----------HIYNSVVRIAP---DR-STTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp -EC-----------BTTCCEEEECT---TC-CEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred -Ee-----------CCCCeEEEECC---CC-CEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 21 23456888873 43 333332111 223457888 88888877654
No 487
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.78 E-value=0.006 Score=65.24 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=78.6
Q ss_pred EEEEEc-CCeeeecCCC------ccccccccCC-CCcEEEEEeecCCccc-----cccCCCCCceeEEEeccCceEEEec
Q 002164 316 LVLVSL-DGTVKEIGPP------AVYTSLDPSP-DEKYILISSIHRPYSF-----IVPCGRFPRQVGVWTTDGIFVRELC 382 (958)
Q Consensus 316 l~~~~~-~g~~~~l~~~------~~~~~~~~Sp-DGk~l~~~~~~~~~~~-----~~~~~~~~~~i~l~d~~~~~~~~l~ 382 (958)
|++++. +|..+.+... .....+++.| ||+ |+++........ ........+.++.++.+++..+.+.
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 667776 5554444321 2245678999 885 555542210000 0000112357888988766655432
Q ss_pred cCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCC---CceEEEeeccccC
Q 002164 383 DLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGE---GPEILHKLDLRYG 459 (958)
Q Consensus 383 ~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~---~~~~l~~~~~~~~ 459 (958)
.. ......++|+|||+.|++. + ...+.|++++. ++. ..+.+....+ ..
T Consensus 182 ~~-------------~~~p~gia~~~dg~~lyv~-d-----------~~~~~I~~~~~---~~~~~~~~~~~~~~~g-P~ 232 (322)
T 2fp8_A 182 KE-------------LHVPGGAEVSADSSFVLVA-E-----------FLSHQIVKYWL---EGPKKGTAEVLVKIPN-PG 232 (322)
T ss_dssp EE-------------ESCCCEEEECTTSSEEEEE-E-----------GGGTEEEEEES---SSTTTTCEEEEEECSS-EE
T ss_pred cC-------------CccCcceEECCCCCEEEEE-e-----------CCCCeEEEEEC---CCCcCCccceEEeCCC-CC
Confidence 21 0234578999999987763 1 23457888885 332 2333332223 45
Q ss_pred ceeeecCCceEEEEEecc-------ccceEEEEEcCCC
Q 002164 460 GISWCDDSLALVYESWYK-------TRRTRTWVISPGS 490 (958)
Q Consensus 460 ~~~~spDg~~l~~~~~~~-------~~~~~l~~~~~~~ 490 (958)
.+++.++|+ |+.+.... .....|++++.++
T Consensus 233 gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 233 NIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG 269 (322)
T ss_dssp EEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS
T ss_pred CeEECCCCC-EEEEecCcccccccCCCccEEEEECCCC
Confidence 678899996 55544331 1125789998865
No 488
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.69 E-value=0.0026 Score=68.08 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=48.8
Q ss_pred cceEEEEEc-CCeeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCc---eEEEeccCCcc
Q 002164 313 TTQLVLVSL-DGTVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGI---FVRELCDLPLA 387 (958)
Q Consensus 313 ~~~l~~~~~-~g~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~---~~~~l~~~~~~ 387 (958)
...|++++. +++.+.+... .....++|+|||++|+++... .+.|+++++++. ..+.+...+
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~------------~~~I~~~~~~~~~~~~~~~~~~~~-- 229 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFL------------SHQIVKYWLEGPKKGTAEVLVKIP-- 229 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG------------GTEEEEEESSSTTTTCEEEEEECS--
T ss_pred CceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCC------------CCeEEEEECCCCcCCccceEEeCC--
Confidence 356999998 6766554333 344567999999998887633 237889988752 222222111
Q ss_pred ccCcccccccccCcceeeeecCCCCceE
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLY 415 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~ 415 (958)
. +..+.+++||+ |++
T Consensus 230 -----------g-P~gi~~d~~G~-l~v 244 (322)
T 2fp8_A 230 -----------N-PGNIKRNADGH-FWV 244 (322)
T ss_dssp -----------S-EEEEEECTTSC-EEE
T ss_pred -----------C-CCCeEECCCCC-EEE
Confidence 1 45788999996 444
No 489
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.67 E-value=0.0083 Score=67.01 Aligned_cols=158 Identities=8% Similarity=0.080 Sum_probs=95.7
Q ss_pred cccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCC
Q 002164 190 KLNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGD 268 (958)
Q Consensus 190 ~~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~ 268 (958)
....++|+| ++..|+++.. ...|++++++++....+...... ...++|+++|+.|+++-.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~---------~~~I~~id~~~~~v~~~~~~~~~-----P~~ia~d~~G~~lyvad~~~~~- 202 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE---------QHPTRLIDFEKEYVSTVYSGLSK-----VRTICWTHEADSMIITNDQNNN- 202 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB---------TEEEEEEETTTTEEEEEECCCSC-----EEEEEECTTSSEEEEEECCSCT-
T ss_pred CCCEEEECCCCCCeEEEEeC---------CCcEEEEECCCCEEEEEecCCCC-----cceEEEeCCCCEEEEEeCCCCc-
Confidence 346678999 5667666542 17899999998877766542221 4578999999988877211000
Q ss_pred CCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEcCCee---eecCCCccccccccCCCCcE
Q 002164 269 PPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSLDGTV---KEIGPPAVYTSLDPSPDEKY 345 (958)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~~g~~---~~l~~~~~~~~~~~SpDGk~ 345 (958)
....++.++.+|.. +.+........++++|++.+
T Consensus 203 -------------------------------------------~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~ 239 (430)
T 3tc9_A 203 -------------------------------------------DRPNNYILTRESGFKVITELTKGQNCNGAETHPINGE 239 (430)
T ss_dssp -------------------------------------------TSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCC
T ss_pred -------------------------------------------ccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCE
Confidence 01124444443321 22222234567789996666
Q ss_pred EEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCc
Q 002164 346 ILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDA 425 (958)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~ 425 (958)
|+++... .+.|+.++.+++....+...+.. ..+..++|+|||++|++. +
T Consensus 240 lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~~-----------~~P~gia~~pdG~~lyv~-d------- 288 (430)
T 3tc9_A 240 LYFNSWN------------AGQVFRYDFTTQETTPLFTIQDS-----------GWEFHIQFHPSGNYAYIV-V------- 288 (430)
T ss_dssp EEEEETT------------TTEEEEEETTTTEEEEEEECSSS-----------SCCEEEEECTTSSEEEEE-E-------
T ss_pred EEEEECC------------CCEEEEEECCCCcEEEEEEcCCC-----------CcceeEEEcCCCCEEEEE-E-------
Confidence 7776532 34899999987766444322111 235689999999977763 1
Q ss_pred ccccccCCeEEEEeC
Q 002164 426 KVEVTPRDIIYTQQA 440 (958)
Q Consensus 426 ~~~~~~~~~l~~~~~ 440 (958)
.....|++++.
T Consensus 289 ----~~~~~I~~~~~ 299 (430)
T 3tc9_A 289 ----VNQHYILRSDY 299 (430)
T ss_dssp ----TTTTEEEEEEE
T ss_pred ----CCCCEEEEEeC
Confidence 23456777764
No 490
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=97.51 E-value=0.00027 Score=78.03 Aligned_cols=37 Identities=16% Similarity=0.069 Sum_probs=32.4
Q ss_pred CcEEEEEeChHHHHHHHHHHh--------------------------CCCceeEEEEeccCCC
Q 002164 759 SKIAVGGHSYGAFMTANLLAH--------------------------APHLFCCGIARSGAYN 795 (958)
Q Consensus 759 ~~i~l~G~S~GG~~a~~~a~~--------------------------~p~~~~a~v~~~~~~~ 795 (958)
+++.|+||||||.++..++.. +|++++.+|+++++..
T Consensus 151 ~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~~ 213 (431)
T 2hih_A 151 HPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPHN 213 (431)
T ss_dssp BCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCTT
T ss_pred CCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCCC
Confidence 689999999999999998876 6789999999987643
No 491
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=97.47 E-value=0.00057 Score=74.30 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=31.5
Q ss_pred CCcEEEEEeChHHHHHHHHHHh-------------------CC------CceeEEEEeccCCC
Q 002164 758 PSKIAVGGHSYGAFMTANLLAH-------------------AP------HLFCCGIARSGAYN 795 (958)
Q Consensus 758 ~~~i~l~G~S~GG~~a~~~a~~-------------------~p------~~~~a~v~~~~~~~ 795 (958)
.+++.|+||||||.++..++.+ +| ++++.+|.+++...
T Consensus 103 ~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~~ 165 (387)
T 2dsn_A 103 GGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPHD 165 (387)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCTT
T ss_pred CCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCCC
Confidence 4689999999999999999872 35 68999999987543
No 492
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.46 E-value=0.043 Score=55.74 Aligned_cols=115 Identities=15% Similarity=0.210 Sum_probs=72.5
Q ss_pred ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEeccCCccccCcccccccccCcceeeeecCCC
Q 002164 332 AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKP 411 (958)
Q Consensus 332 ~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~ 411 (958)
..+..++|+||++.|+.+.+. +..|+.+|++++..+.+..... ....++++.+||.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~------------~~~I~~ld~~g~v~~~i~l~g~------------~D~EGIa~~~~g~ 82 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK------------PAAIVEMTTNGDLIRTIPLDFV------------KDLETIEYIGDNQ 82 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET------------TEEEEEEETTCCEEEEEECSSC------------SSEEEEEECSTTE
T ss_pred cCcceeEEeCCCCEEEEEECC------------CCeEEEEeCCCCEEEEEecCCC------------CChHHeEEeCCCE
Confidence 567788999999999888765 2378999998766666532110 1235678888875
Q ss_pred CceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEe---------eccccCceeeecCCceEEEEEeccccceE
Q 002164 412 STLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHK---------LDLRYGGISWCDDSLALVYESWYKTRRTR 482 (958)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~---------~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 482 (958)
+++ ++. ..+.++++++. ..+....+.. .+....+++|+|++++|+.+.+... ..
T Consensus 83 -~~v-s~E-----------~~~~l~~~~v~--~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p--~~ 145 (255)
T 3qqz_A 83 -FVI-SDE-----------RDYAIYVISLT--PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP--IE 145 (255)
T ss_dssp -EEE-EET-----------TTTEEEEEEEC--TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS--EE
T ss_pred -EEE-EEC-----------CCCcEEEEEcC--CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC--ce
Confidence 222 221 23467777651 2222122211 1223467999999999988776664 57
Q ss_pred EEEEc
Q 002164 483 TWVIS 487 (958)
Q Consensus 483 l~~~~ 487 (958)
||.++
T Consensus 146 i~~~~ 150 (255)
T 3qqz_A 146 VYKVN 150 (255)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99887
No 493
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.37 E-value=0.015 Score=58.75 Aligned_cols=167 Identities=10% Similarity=0.060 Sum_probs=90.9
Q ss_pred hcceEEEEEc-CCeee-ecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCce-EEEeccCCccc
Q 002164 312 ATTQLVLVSL-DGTVK-EIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAE 388 (958)
Q Consensus 312 ~~~~l~~~~~-~g~~~-~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~ 388 (958)
+.+.|..+|+ +|+.. .+.-+..+..-..+++|++|+...-. .+.++++|.++.+ ..++.. +
T Consensus 63 g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~------------~~~v~v~D~~t~~~~~ti~~-~--- 126 (262)
T 3nol_A 63 GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK------------NGLGFVWNIRNLRQVRSFNY-D--- 126 (262)
T ss_dssp TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------------SSEEEEEETTTCCEEEEEEC-S---
T ss_pred CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee------------CCEEEEEECccCcEEEEEEC-C---
Confidence 3467999999 88543 33222222222345678888777532 3489999998544 333332 1
Q ss_pred cCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCCceEEEee--ccccC---ceee
Q 002164 389 DIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEGPEILHKL--DLRYG---GISW 463 (958)
Q Consensus 389 ~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~l~~~--~~~~~---~~~~ 463 (958)
......++||+.|+.. ++.+.|+.+|. .+.+....+.-. ...+. .+.|
T Consensus 127 ------------~eG~glt~dg~~L~~S-------------dGs~~i~~iDp--~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 127 ------------GEGWGLTHNDQYLIMS-------------DGTPVLRFLDP--ESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp ------------SCCCCEEECSSCEEEC-------------CSSSEEEEECT--TTCSEEEEEECEETTEECCCEEEEEE
T ss_pred ------------CCceEEecCCCEEEEE-------------CCCCeEEEEcC--CCCeEEEEEEeccCCccccccceeEE
Confidence 1234577899887763 33567999985 333344444322 12222 3577
Q ss_pred ecCCceEEEEEeccccceEEEEEcCCCCCCCcEEEeccCC--ccc---cCCCCCC-ceEeccCCceEEEEe
Q 002164 464 CDDSLALVYESWYKTRRTRTWVISPGSKDVAPRILFDRSS--EDV---YSDPGSP-MMRRTSTGTYVIAKI 528 (958)
Q Consensus 464 spDg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~-~~~~spdG~~l~~~~ 528 (958)
. || .|+...+.. ..|.+||+.++. .....+... ... ......+ -++|+|+++.|+...
T Consensus 180 ~-~G-~lyan~w~~---~~I~vIDp~tG~--V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 180 V-DG-EIFANVWQT---NKIVRIDPETGK--VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp E-TT-EEEEEETTS---SEEEEECTTTCB--EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred E-CC-EEEEEEccC---CeEEEEECCCCc--EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 6 66 465554444 369999999863 332222210 000 0000011 167888888776665
No 494
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.15 E-value=0.12 Score=55.72 Aligned_cols=153 Identities=20% Similarity=0.180 Sum_probs=77.0
Q ss_pred ceEEEEEcCCeeeecC------CC-ccccccccCCC---CcEEEEEeec-CCccccccCCCCCceeEEEeccCc-----e
Q 002164 314 TQLVLVSLDGTVKEIG------PP-AVYTSLDPSPD---EKYILISSIH-RPYSFIVPCGRFPRQVGVWTTDGI-----F 377 (958)
Q Consensus 314 ~~l~~~~~~g~~~~l~------~~-~~~~~~~~SpD---Gk~l~~~~~~-~~~~~~~~~~~~~~~i~l~d~~~~-----~ 377 (958)
..|++++.+|+ +.+. .. .....++++|| +.+|++.... ... ......|..++.+++ .
T Consensus 49 g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~------~~~~~~v~r~~~~~~~~~~~~ 121 (354)
T 3a9g_A 49 GRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG------GHIRNRVIRGRLDGSTFKLKE 121 (354)
T ss_dssp TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG------GCEEEEEEEEEECSSSCCEEE
T ss_pred CEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC------CCcceEEEEEEECCCCcCcCc
Confidence 34677755554 3221 12 44567889998 6677665432 100 000136777777654 1
Q ss_pred EEEe-ccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCccc---ccccCCeEEEEeCCCCCCC-------
Q 002164 378 VREL-CDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKV---EVTPRDIIYTQQAEPVQGE------- 446 (958)
Q Consensus 378 ~~~l-~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~g~------- 446 (958)
.+.| ...+.. .......+.|.|||+ |++. . .+.+.... .....+.|++++. +|.
T Consensus 122 ~~~l~~~~~~~---------~~h~~~~l~~~pDG~-Lyvt-~-G~~~~~~~~~d~~~~~G~I~ri~~---dG~~p~~npf 186 (354)
T 3a9g_A 122 VKTLIDGIPGA---------YIHNGGRIRFGPDGM-LYIT-T-GDAADPRLAQDLSSLAGKILRVDE---EGRPPADNPF 186 (354)
T ss_dssp EEEEEEEEECC---------SSCCCCCEEECTTSC-EEEE-C-CCTTCGGGGTCTTCCSSEEEEECT---TSCCCTTSSS
T ss_pred cEEEEEcCCCC---------CCcCCceEEECCCCc-EEEE-E-CCCCCCccccCCCCCCeEEEEEcC---CCCCCCCCCC
Confidence 2222 212210 012346799999995 5553 1 12211110 0123457888885 554
Q ss_pred -CceEEEeeccccCceeeecCCceEEEEEeccccceEEEEEcC
Q 002164 447 -GPEILHKLDLRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 447 -~~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
..+.+...-.....++|+|+...|+++........+|.++..
T Consensus 187 ~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 187 PNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp TTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred CCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 233444333445678999955556665433322345666654
No 495
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.10 E-value=0.0088 Score=60.32 Aligned_cols=151 Identities=15% Similarity=0.092 Sum_probs=84.1
Q ss_pred EEEEEEeCCCeEEEEEEEecCCCCCCCCCCceEEEEECCCCCcCccc-CCcccCCCCCCCCcC---cHHHHHHHHCCcEE
Q 002164 640 ELIKYQRKDGVQLSATLYLPPGYDPSKDGPLPCLFWSYPGEFKSKDA-AGQVRGSPNEFPRIG---STSVLLWLARGFAI 715 (958)
Q Consensus 640 ~~~~~~~~dg~~l~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~la~~G~~v 715 (958)
-.+.+....|..+..|++.... ++. ..|++|+++|||.++... +.....+|-....-+ ......|.+. ..+
T Consensus 22 Gy~~v~~~~~~~lFywf~es~~-~~~---~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-anv 96 (255)
T 1whs_A 22 GYITVDEGAGRSLFYLLQEAPE-DAQ---PAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKV-ANV 96 (255)
T ss_dssp EEEEEETTTTEEEEEEEECCCG-GGC---SCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGT-SEE
T ss_pred EEEECCCCCCcEEEEEEEEecC-CCC---CCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccccc-CCE
Confidence 3566665567888888775432 222 379999999999887654 222222222211000 0000012222 445
Q ss_pred EEcCCCCCCCCCCcccchh----hHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEEeChHHHHHHHHHHhC-----C-Cce
Q 002164 716 LGGPTTPIIGEGDEEANDR----FVEQLVACAEAAVEEVVR-RGVAHPSKIAVGGHSYGAFMTANLLAHA-----P-HLF 784 (958)
Q Consensus 716 l~~~~~~~~G~G~~~~~~~----~~~~~~~D~~~av~~l~~-~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----p-~~~ 784 (958)
|.+|..-..|+........ -.....+|+..+++...+ .+.....++.|+|.||||..+-.+|..- + =-+
T Consensus 97 lfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inL 176 (255)
T 1whs_A 97 LFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINL 176 (255)
T ss_dssp EEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEE
T ss_pred EEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCccccc
Confidence 5544322334332222111 234556677666664444 4455557899999999999988777531 1 247
Q ss_pred eEEEEeccCCC
Q 002164 785 CCGIARSGAYN 795 (958)
Q Consensus 785 ~a~v~~~~~~~ 795 (958)
+++++.+|..|
T Consensus 177 kGi~ign~~~d 187 (255)
T 1whs_A 177 KGFMVGNGLID 187 (255)
T ss_dssp EEEEEEEECCB
T ss_pred ceEEecCCccC
Confidence 88998888765
No 496
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.09 E-value=0.019 Score=58.08 Aligned_cols=194 Identities=11% Similarity=0.129 Sum_probs=108.5
Q ss_pred cceeecCCCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEEecCCeEEEEEecCCCCCCCC
Q 002164 192 NFVTWSQDGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVWVNNSTLLVCTIPLLRGDPPK 271 (958)
Q Consensus 192 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~wspDG~~l~~~~~~~~~~~~~ 271 (958)
....|+ || .|+.+.. ..+...|.++|+++|+..+-...+.. .-.-..+++|+.|+.+.-
T Consensus 46 qGL~~~-~~-~LyestG------~~g~S~v~~vD~~Tgkv~~~~~l~~~-----~FgeGit~~g~~ly~ltw-------- 104 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTG------LNGRSSIRKVDIESGKTLQQIELGKR-----YFGEGISDWKDKIVGLTW-------- 104 (262)
T ss_dssp EEEEEE-TT-EEEEEEE------ETTEEEEEEECTTTCCEEEEEECCTT-----CCEEEEEEETTEEEEEES--------
T ss_pred ceEEEE-CC-EEEEECC------CCCCceEEEEECCCCcEEEEEecCCc-----cceeEEEEeCCEEEEEEe--------
Confidence 456787 55 5555442 23467899999999987654443332 112224556777776610
Q ss_pred CCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc-CCe-eeecCCCccccccccCCCCcEEEEE
Q 002164 272 KPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL-DGT-VKEIGPPAVYTSLDPSPDEKYILIS 349 (958)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~-~g~-~~~l~~~~~~~~~~~SpDGk~l~~~ 349 (958)
....++++|. +++ ...+.-+. ....+++||++|+.+
T Consensus 105 ----------------------------------------~~~~v~v~D~~t~~~~~ti~~~~--eG~glt~dg~~L~~S 142 (262)
T 3nol_A 105 ----------------------------------------KNGLGFVWNIRNLRQVRSFNYDG--EGWGLTHNDQYLIMS 142 (262)
T ss_dssp ----------------------------------------SSSEEEEEETTTCCEEEEEECSS--CCCCEEECSSCEEEC
T ss_pred ----------------------------------------eCCEEEEEECccCcEEEEEECCC--CceEEecCCCEEEEE
Confidence 2356999998 764 33443321 335667899988776
Q ss_pred eecCCccccccCCCCCceeEEEeccCce-EEEeccCCccccCcccccccccCcceeeeecCCCCceEEEEeccCCCcccc
Q 002164 350 SIHRPYSFIVPCGRFPRQVGVWTTDGIF-VRELCDLPLAEDIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVE 428 (958)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~i~l~d~~~~~-~~~l~~~~~~~~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~ 428 (958)
. . ..+|+++|.++.+ .+.+.... ...|. .....+.|. ||+ |+..
T Consensus 143 d-G------------s~~i~~iDp~T~~v~~~I~V~~--~g~~~------~~lNELe~~-~G~-lyan------------ 187 (262)
T 3nol_A 143 D-G------------TPVLRFLDPESLTPVRTITVTA--HGEEL------PELNELEWV-DGE-IFAN------------ 187 (262)
T ss_dssp C-S------------SSEEEEECTTTCSEEEEEECEE--TTEEC------CCEEEEEEE-TTE-EEEE------------
T ss_pred C-C------------CCeEEEEcCCCCeEEEEEEecc--CCccc------cccceeEEE-CCE-EEEE------------
Confidence 4 2 2379999988543 33333211 11111 112235676 664 3331
Q ss_pred cccCCeEEEEeCCCCCCCCceEEEeec------------cccCceeeecCCceEEEEEeccccceEEEEEcC
Q 002164 429 VTPRDIIYTQQAEPVQGEGPEILHKLD------------LRYGGISWCDDSLALVYESWYKTRRTRTWVISP 488 (958)
Q Consensus 429 ~~~~~~l~~~~~~~~~g~~~~~l~~~~------------~~~~~~~~spDg~~l~~~~~~~~~~~~l~~~~~ 488 (958)
....+.|.++|. .+|.....+.... .-..+++|+|+++.|+.+... ..++|.+.+
T Consensus 188 ~w~~~~I~vIDp--~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~---Wp~~~ev~~ 254 (262)
T 3nol_A 188 VWQTNKIVRIDP--ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL---WPKVFEITL 254 (262)
T ss_dssp ETTSSEEEEECT--TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT---CSEEEEEEE
T ss_pred EccCCeEEEEEC--CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC---CCceEEEEE
Confidence 234668899985 3443334443210 112569999999988877522 245666543
No 497
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.06 E-value=0.029 Score=60.71 Aligned_cols=249 Identities=12% Similarity=-0.029 Sum_probs=0.0
Q ss_pred CCCCCCceecCCCCEEEEEecCCCCCchhcccccceeeceeecCCCCCccceeeEeceeEEEccCCCCCCceeeeccCC-
Q 002164 108 APPLPALSFSPQRDKILFLKRRALPPLEELARPEEKLAGLRIDGKCNTRSRMSFYTGIGIHQLFPDGKLGQEIEIQGFP- 186 (958)
Q Consensus 108 ~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~dg~~~~~~~lt~~~- 186 (958)
......++|+|||+ |.++... +.|++++ + +....+..++
T Consensus 30 l~~P~~ia~~pdG~-l~V~e~~---------------------------------g~I~~i~--~----g~~~~~~~~~v 69 (352)
T 2ism_A 30 LEVPWALAFLPDGG-MLIAERP---------------------------------GRIRLFR--E----GRLSTYAELSV 69 (352)
T ss_dssp CSCEEEEEECTTSC-EEEEETT---------------------------------TEEEEEE--T----TEEEEEEECCC
T ss_pred CCCceEEEEcCCCe-EEEEeCC---------------------------------CeEEEEE--C----CCccEeecceE
Q ss_pred ---CCCcccceeecCC---CCeEEEEEeeccccCCCCC---ceEEEEEcCCC---ceeeccCCCC--ccccccccceEEe
Q 002164 187 ---DGAKLNFVTWSQD---GKHLAFSIRIDAEDSSSSK---LRVWVADVDTG---KARPLFQSPD--IYLNAIFDNFVWV 252 (958)
Q Consensus 187 ---~~~~~~~~~wSPD---G~~iaf~~~~~~~~~~~~~---~~l~~~~~~~g---~~~~lt~~~~--~~~~~~~~~~~ws 252 (958)
........+|+|| +.+|+++.. .... ..|++++.+++ +.+.+...-. .........++|.
T Consensus 70 ~~~g~~~p~gia~~pdf~~~g~lYv~~~------~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~ 143 (352)
T 2ism_A 70 YHRGESGLLGLALHPRFPQEPYVYAYRT------VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFG 143 (352)
T ss_dssp CCSTTCSEEEEEECTTTTTSCEEEEEEE------ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEEC
T ss_pred eecCCCCceeEEECCCCCCCCEEEEEEe------cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEEC
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhc--------------ceEEE
Q 002164 253 NNSTLLVCTIPLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYAT--------------TQLVL 318 (958)
Q Consensus 253 pDG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~--------------~~l~~ 318 (958)
|||.+.+.. +. ..|++
T Consensus 144 pdG~Lyv~~--------------------------------------------------G~~~~~~~~~d~~~~~g~I~r 173 (352)
T 2ism_A 144 PDGMLYVTT--------------------------------------------------GEVYERELAQDLASLGGKILR 173 (352)
T ss_dssp TTSCEEEEC--------------------------------------------------CCTTCGGGGGCTTCSSSEEEE
T ss_pred CCCCEEEEE--------------------------------------------------CCCCCCccccCCCCCceEEEE
Q ss_pred EEcCC--------------eeeecCCC-ccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceEEEecc
Q 002164 319 VSLDG--------------TVKEIGPP-AVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFVRELCD 383 (958)
Q Consensus 319 ~~~~g--------------~~~~l~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~~~l~~ 383 (958)
++.+| ..+.+..+ .....++|+|+...|+++... .-.+.+....+...+..
T Consensus 174 i~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g--------------~~~~~~~~~dei~~i~~ 239 (352)
T 2ism_A 174 LTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHG--------------PSGEQGYGHDEVNLIVP 239 (352)
T ss_dssp ECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEEC--------------C------CCCEEEEECT
T ss_pred EcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcC--------------CCCCCCCCCeEEEEecc
Q ss_pred CCccc-------------cCcccccccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeCCCCCCCC---
Q 002164 384 LPLAE-------------DIPIAFNSVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQAEPVQGEG--- 447 (958)
Q Consensus 384 ~~~~~-------------~~p~~~~~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~--- 447 (958)
..... ..|...-.....+..++| .+|+.++.. .....|+++++ ++..
T Consensus 240 G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~-------------~~~~~v~~v~~---~~~~~~~ 302 (352)
T 2ism_A 240 GGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAG-------------LRGQALLRLVL---EGERGRW 302 (352)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEE-------------TTTTEEEEEEE---EEETTEE
T ss_pred CCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEE-------------CCCCEEEEEEE---CCCCcce
Q ss_pred ----ceEEEeeccccCceeeecCCceEEEEEeccccce---------EEEEE
Q 002164 448 ----PEILHKLDLRYGGISWCDDSLALVYESWYKTRRT---------RTWVI 486 (958)
Q Consensus 448 ----~~~l~~~~~~~~~~~~spDg~~l~~~~~~~~~~~---------~l~~~ 486 (958)
...+.....+...+++.||| .|+++.+... . +||++
T Consensus 303 ~~~~~~~~~~~~~rp~~v~~~pdG-~lyv~~~~~~--g~g~~~~~~~~i~ri 351 (352)
T 2ism_A 303 RVLRVETALSGFGRLREVQVGPDG-ALYVTTSNRD--GRGQVRPGDDRVLRL 351 (352)
T ss_dssp EEEEEEEEEESSCCEEEEEECTTS-CEEEEECSTT--TTSCCCTTCSCEEEE
T ss_pred eecchheecccCCCeeEEEECCCC-cEEEEEeCCC--CCCCCCCCCCEEEEe
No 498
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.02 E-value=0.019 Score=62.51 Aligned_cols=85 Identities=13% Similarity=0.067 Sum_probs=52.7
Q ss_pred hcceEEEEEc-CCeeeecCCCccccccccCCCCcEEEEEeecCCccccccCCCCCceeEEEeccCceE---EEeccCCcc
Q 002164 312 ATTQLVLVSL-DGTVKEIGPPAVYTSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTDGIFV---RELCDLPLA 387 (958)
Q Consensus 312 ~~~~l~~~~~-~g~~~~l~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~~~~~---~~l~~~~~~ 387 (958)
..+.|+++++ ++....+. ..+..++|||+| +++... ++++.+|+.++++. +.|...+..
T Consensus 144 ~dG~L~v~dl~~~~~~~~~--~~Vs~v~WSpkG--~~vg~~-------------dg~i~~~~~~~~~~~~k~~I~~Pp~~ 206 (388)
T 1xip_A 144 SVNDLSALDLRTKSTKQLA--QNVTSFDVTNSQ--LAVLLK-------------DRSFQSFAWRNGEMEKQFEFSLPSEL 206 (388)
T ss_dssp TTSEEEEEETTTCCEEEEE--ESEEEEEECSSE--EEEEET-------------TSCEEEEEEETTEEEEEEEECCCHHH
T ss_pred CCCCEEEEEccCCcccccc--CCceEEEEcCCc--eEEEEc-------------CCcEEEEcCCCccccccceecCCccc
Confidence 3467999999 67655543 468899999999 444432 24788999888774 344221110
Q ss_pred ccCcccccccccCcceeeeecCCCCceEEE
Q 002164 388 EDIPIAFNSVRKGMRSINWRSDKPSTLYWA 417 (958)
Q Consensus 388 ~~~p~~~~~~~~~~~~~~~spDG~~l~~~~ 417 (958)
+.. ......+.++.|.++++.++...
T Consensus 207 ~~~----~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 207 EEL----PVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp HTS----CTTTSEEEEEEESSSSEEEEEEE
T ss_pred ccc----cCCCeeEEEEEEecCCeEEEEEc
Confidence 000 00113457899999998877653
No 499
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.02 E-value=0.033 Score=62.33 Aligned_cols=164 Identities=10% Similarity=0.036 Sum_probs=96.5
Q ss_pred ccceeecC-CCCeEEEEEeeccccCCCCCceEEEEEcCCCceeeccCCCCccccccccceEE-------ecCCeEEEEEe
Q 002164 191 LNFVTWSQ-DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARPLFQSPDIYLNAIFDNFVW-------VNNSTLLVCTI 262 (958)
Q Consensus 191 ~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~lt~~~~~~~~~~~~~~~w-------spDG~~l~~~~ 262 (958)
....+++| ++..|+++.+ ....|+++|++++....+.......++ ....++| +++|+.|+++.
T Consensus 141 p~~la~dp~~~~~Lyv~~~--------~~~~i~~ID~~~~~v~~l~~~~~~~~~-~p~~ia~~~~~~~~d~~G~~lyvad 211 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYD--------GHKAIQLIDLKNRMLSSPLNINTIPTN-RIRSIAFNKKIEGYADEAEYMIVAI 211 (496)
T ss_dssp EEEEEEETTEEEEEEEEEE--------TEEEEEEEETTTTEEEEEECCTTSSCS-BEEEEEECCCBTTTBCTTCEEEEEE
T ss_pred CCEEEEccCCCCEEEEEEC--------CCCeEEEEECCCCEEEEEEccCccccC-CCcEEEEeecccccCCCCCEEEEEe
Confidence 45678899 5667666543 245799999999888777554332211 1457889 99999888772
Q ss_pred cCCCCCCCCCCCCCCCCceeeecCCcccccchhhhhccCchhhhHHHHhhcceEEEEEc--CCee------eecCCCccc
Q 002164 263 PLLRGDPPKKPLVPLGPKMQSNEKRDIIQVRTFQDLLKDEYDEDLFDYYATTQLVLVSL--DGTV------KEIGPPAVY 334 (958)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~l~~~~~--~g~~------~~l~~~~~~ 334 (958)
..... . .....++.++. +|.. +.+......
T Consensus 212 ~~~~~---------------------~---------------------~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p 249 (496)
T 3kya_A 212 DYDGK---------------------G---------------------DESPSVYIIKRNADGTFDDRSDIQLIAAYKQC 249 (496)
T ss_dssp CCCTT---------------------G---------------------GGEEEEEEEECCTTSCCSTTSCEEEEEEESCC
T ss_pred CCCCC---------------------c---------------------ccCceEEEEecCCCCceeecccceeeccCCCc
Confidence 11100 0 01123555544 2332 222211334
Q ss_pred cccccCCCCcEEEEEeecCCccccccCCCCCceeEEEecc-------CceE------------EEeccCCccccCccccc
Q 002164 335 TSLDPSPDEKYILISSIHRPYSFIVPCGRFPRQVGVWTTD-------GIFV------------RELCDLPLAEDIPIAFN 395 (958)
Q Consensus 335 ~~~~~SpDGk~l~~~~~~~~~~~~~~~~~~~~~i~l~d~~-------~~~~------------~~l~~~~~~~~~p~~~~ 395 (958)
..++.+|++++|+++... .+.|+.+|++ ++.. +.+...+
T Consensus 250 ~giavdp~~g~LYvtd~~------------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~---------- 307 (496)
T 3kya_A 250 NGATIHPINGELYFNSYE------------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA---------- 307 (496)
T ss_dssp CCEEECTTTCCEEEEETT------------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS----------
T ss_pred eEEEEcCCCCeEEEEECC------------CCEEEEEecccccccccCceeecccccccccccceeEecC----------
Confidence 567889988888888743 3479999987 4432 1221111
Q ss_pred ccccCcceeeeecCCCCceEEEEeccCCCcccccccCCeEEEEeC
Q 002164 396 SVRKGMRSINWRSDKPSTLYWAETQDGGDAKVEVTPRDIIYTQQA 440 (958)
Q Consensus 396 ~~~~~~~~~~~spDG~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ 440 (958)
.......++|+|||+.|++. + .....|+.++.
T Consensus 308 -~~~~p~~ia~~p~G~~lYva-D-----------~~~h~I~kid~ 339 (496)
T 3kya_A 308 -DPSWEFQIFIHPTGKYAYFG-V-----------INNHYFMRSDY 339 (496)
T ss_dssp -SSSCCEEEEECTTSSEEEEE-E-----------TTTTEEEEEEE
T ss_pred -CCCCceEEEEcCCCCEEEEE-e-----------CCCCEEEEEec
Confidence 01234679999999976663 1 34557888764
No 500
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.99 E-value=0.58 Score=55.33 Aligned_cols=26 Identities=19% Similarity=-0.014 Sum_probs=18.2
Q ss_pred CCCeEEEEEeeccccCCCCCceEEEEEcCCCceee
Q 002164 199 DGKHLAFSIRIDAEDSSSSKLRVWVADVDTGKARP 233 (958)
Q Consensus 199 DG~~iaf~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 233 (958)
++.+|++.. ....|+.+|+++|+..-
T Consensus 127 ~~~~v~v~~---------~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 127 WKGKVYVGA---------WDGRLIALDAATGKEVW 152 (677)
T ss_dssp ETTEEEEEC---------TTSEEEEEETTTCCEEE
T ss_pred ECCEEEEEc---------CCCEEEEEECCCCCEEe
Confidence 456676643 25689999999888753
Done!