BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002165
(957 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22243|C3H31_ARATH Zinc finger CCCH domain-containing protein 31 OS=Arabidopsis
thaliana GN=At2g47680 PE=2 SV=2
Length = 1015
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/935 (65%), Positives = 752/935 (80%), Gaps = 17/935 (1%)
Query: 23 FSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFAVV 82
F+SLP+M+++ +I++K+LENRVTLIVGE GCGKSSQVPQFLL NM PILCTQPRRFAVV
Sbjct: 23 FASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAPILCTQPRRFAVV 82
Query: 83 AVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVII 142
AVAKMVAK RN +LGGE+GYHIGHSK L+E SKI+FKTAGVLLDEM D+GLNALKYKVII
Sbjct: 83 AVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDKGLNALKYKVII 142
Query: 143 LDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAI 202
LDEVHERSVESDLVLVCVKQ L+K NDLRVVLMSATADIT+YRDYF++LGRGERVEV+AI
Sbjct: 143 LDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELGRGERVEVVAI 202
Query: 203 PSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH 262
PS +QRTIFQRRV YLEQV LLGV +S+LS+ YC GPSPS A+ EIKPE+ LIH
Sbjct: 203 PSPDQRTIFQRRVLYLEQVAGLLGV----SSDLSA--YCPGPSPSSADTEIKPELQNLIH 256
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMK 322
DL+L+IH+ E DIEKSILVFLPTYY+LEQQ+H ++P + F+VHILH S+DTEQAL AMK
Sbjct: 257 DLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVHILHRSIDTEQALAAMK 316
Query: 323 ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQR 382
IC+S RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD +RK D+ +LVWVS+SQAEQR
Sbjct: 317 ICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQR 376
Query: 383 RGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQ 442
RGRTGRTCDG+VYRLV +FF LE+HE P+IL+LSLR QVL ICC ES+AI+D LL
Sbjct: 377 RGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLA 436
Query: 443 KALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGE 502
KA+DPP P+VV DAL +L +AL+K SPRGRYEPTFYGRLLASF LSFDAS+LV+KFGE
Sbjct: 437 KAMDPPDPDVVDDALRMLLSIQALRK-SPRGRYEPTFYGRLLASFPLSFDASILVVKFGE 495
Query: 503 IGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNL 562
+GMLR+GILLG+LMDT PLPI HPFGDD+LF EY YFG G+ + GR+EMV+M N
Sbjct: 496 MGMLRQGILLGVLMDTLPLPIHHPFGDDSLFLEYVDHYFG--GSKTISGGRREMVLMANF 553
Query: 563 CAFQFWQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELY 622
CAFQFWQ VFKDK RL++L+Q+L ++ K + P+IE+EWC H + QSS +HVSELY
Sbjct: 554 CAFQFWQRVFKDKHRLENLKQLLSKEKDKDLKLMFPEIEKEWCDFHNIAQSSFYHVSELY 613
Query: 623 EDILNAVHRFRPKFLGTSNGLPTYYDPYEFEHTCLLNCDPPRDMDPLAADNEHLGPSFEA 682
ED L++ HRFRP+F+ +S+ PTYY+PYEF+HTC + C P D + D ++ P E
Sbjct: 614 EDTLSSFHRFRPQFISSSDSQPTYYNPYEFDHTCYIECQPSEDKYLHSEDVDNNQPPPEV 673
Query: 683 KKCVAVPFVAPNQFQSNNVAEKLASIIKEIRVQYVEDVSGNQDKAVNGSE--TPGEAPLC 740
+KCV+VPFV PN FQ+N +AE +ASIIKEIR Q S N A+ + GEAP+C
Sbjct: 674 RKCVSVPFVPPNAFQANAIAENMASIIKEIRTQCTPSESDNGHGALEPEDYVEYGEAPVC 733
Query: 741 VYFINGSCNRGTGCPFSHSLQAKRPACKFFYSLQGCRNGDSCIFSHDLGQ---PVLPSSS 797
VYF+NG CNRG C F+H+LQ+ RPACKFF S QGCRNG+SC+FSH + + LP
Sbjct: 734 VYFLNGYCNRGGQCTFTHTLQSTRPACKFFASSQGCRNGESCLFSHAMRRRTTSYLPPPQ 793
Query: 798 FTCLPEDGVANAASLLRLFPTSSDGSILLLDDTDMHFSANLACLYDPSRIISTTCLSDSA 857
CLPE+ ++ + LL LFPTSS+G IL+ DD+DMHF++++A Y RI+ST+ S++
Sbjct: 794 --CLPEEDGSSTSPLLDLFPTSSEGCILVFDDSDMHFTSSIANRYPSWRILSTSSSSETL 851
Query: 858 ICDTSLAGIRILWGLCHSLKTVISEAG-DNPIPWKEVKCVLWYPSLESYSENLESQKTLM 916
CD+SLA RI WGL H +T+IS+AG +NPIPW EVKCVLW+ + +SY++ E QKT++
Sbjct: 852 FCDSSLADTRIFWGLNHPYQTIISKAGRENPIPWNEVKCVLWFLNPDSYADTPEKQKTIL 911
Query: 917 QNFFEHLAIRMLADALYDTRVIITMNNIKFAQLQV 951
QNFFEH+AIR+L D LY RV++TMNN++F+ LQV
Sbjct: 912 QNFFEHMAIRLLGDKLYKIRVVLTMNNVRFSLLQV 946
>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp.
japonica GN=Os01g0256800 PE=2 SV=1
Length = 1007
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/935 (57%), Positives = 677/935 (72%), Gaps = 23/935 (2%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFAVVAVA 85
L V +LR KIVEKV NRVTLIVG+TGCGKSS VPQFLL ENMEPILCTQPRRFAVVA+A
Sbjct: 18 LAVEALRGKIVEKVKGNRVTLIVGDTGCGKSSMVPQFLLEENMEPILCTQPRRFAVVAIA 77
Query: 86 KMVAKGRNCELGGEVGYHIGHSKHL---SERSKIVFKTAGVLLDEMRDRGLNALKYKVII 142
+M+A+ RNC++G EVGYHIGHS S+RS+IVFKTAGV+L++MRD+G+ AL YKVII
Sbjct: 78 QMIAESRNCQVGEEVGYHIGHSNVSNLNSKRSRIVFKTAGVVLEQMRDKGIAALNYKVII 137
Query: 143 LDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEVLAI 202
LDE+HERSVESDLVL CVKQ ++KKNDLR++LMSATADIT+Y+DYFRDLGRGERVEV+AI
Sbjct: 138 LDEIHERSVESDLVLACVKQFMMKKNDLRLILMSATADITRYKDYFRDLGRGERVEVIAI 197
Query: 203 PSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIH 262
PS+ + +IFQR+V YLEQ+ ++L +D SE S +YCSGP+ + A+A +KP+V++LIH
Sbjct: 198 PSSPRSSIFQRKVLYLEQIVDILKMD----SESLSTKYCSGPN-TAADAGLKPDVYELIH 252
Query: 263 DLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAMK 322
L+LHIH+NE DI KSILVFLPTYYALEQQW + SS FKVHILH S+DT++AL MK
Sbjct: 253 RLLLHIHQNEPDIGKSILVFLPTYYALEQQWIRLLSASSMFKVHILHRSIDTDEALQTMK 312
Query: 323 ICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQR 382
+ KS RKVILATNIAESSVTIP VAYVIDSCRSLQV+WD RK DSAELVWVS+SQAEQR
Sbjct: 313 VSKSCRKVILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRKTDSAELVWVSKSQAEQR 372
Query: 383 RGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQ 442
+GRTGRTCDGQ+YRLVT F+ +L DHE PAILRLSLR QVL+ICCAES+A++DP VLLQ
Sbjct: 373 KGRTGRTCDGQIYRLVTGPFYNSLTDHEYPAILRLSLREQVLMICCAESRAMNDPHVLLQ 432
Query: 443 KALDPPYPEVVGDALDLLDHKRALQK-ISPRGRYEPTFYGRLLASFSLSFDASVLVLKFG 501
K LDPP +VV DAL+ L RAL K SPRGR+EPTFYG LL S LSFDASVL LKFG
Sbjct: 433 KVLDPPDSDVVEDALESLVQIRALDKPTSPRGRHEPTFYGCLLNSLPLSFDASVLALKFG 492
Query: 502 EIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGN 561
+ G + EGIL+ I++D QPLPI+ PFG L Y YF +G L TG+KE ++GN
Sbjct: 493 DTGSICEGILISIMLDIQPLPIVQPFGHQQLCKMYRNNYFEEEG-IDLQTGKKEAALVGN 551
Query: 562 LCAFQFWQHVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSEL 621
LCAFQFWQ +FKDK RLD L V+ E K + + K E+EWC+ H LV ++L+++SE+
Sbjct: 552 LCAFQFWQRMFKDKYRLDCLINVVNTHEPKASNGFVAKPEDEWCAFHNLVPTALNYISEI 611
Query: 622 YEDILNAVHRFRPKFLGTSNGLPTYYDPYEFEHTCL----LNCDPPRDMDPLAADNEHLG 677
Y+DI+ +HRFRP FL N P Y P EF H CL L + + PL A+N HL
Sbjct: 612 YDDIMGTLHRFRPSFLVKINP-PMYLQPSEFHHMCLRHEVLELENVNSL-PLEAENSHLD 669
Query: 678 PSFEAKKCVAVPFVAPNQFQSNNVAEKLASIIKEIRVQYVEDVSGNQDKAVNGSETPG-E 736
++C A P+V+P F + V + L ++IKE++ Q D ++ V+G P E
Sbjct: 670 ---SHRRCAATPYVSPADFGTTTVVKTLKTLIKEMKTQSAADRVTYRE-LVHGYVQPALE 725
Query: 737 APLCVYFINGSCNRGTGCPFSHSLQAKRPACKFFYSLQGCRNGDSCIFSHDLGQPVLPSS 796
+CV+F+NGSCNRG C FSHS +A RP CKFF +LQGCRNG+SC FSHD G V S
Sbjct: 726 NEMCVFFLNGSCNRGDTCHFSHSSRAPRPICKFFLTLQGCRNGNSCSFSHDSGSLVSSSI 785
Query: 797 SFTCLPEDGVANAASLLRLFPTSSDGSILLLDDTDMHFSANLACLYDPSRIISTTCLSDS 856
+ ++ A + RL P + DG IL+++D + F+ L YDP++II+ T S
Sbjct: 786 TSGICSQENRATSVCCKRLLPAAGDGHILVMNDKSLQFACKLCNYYDPTKIIACTPGPHS 845
Query: 857 AICDTSLAGIRILWGLCHSLKTVISEAGDNPIPWKEVKCVLWYPSLESYSENLESQKTLM 916
D+ G++IL L I +PW ++ V W+ ++S +E++ S++ ++
Sbjct: 846 FESDSVTKGLKILQNLADPSYLFIGGEHKLSVPWTKLSRVFWFADIDS-NESI-SEQVVL 903
Query: 917 QNFFEHLAIRMLADALYDTRVIITMNNIKFAQLQV 951
Q FF+H+AI+ L++ + D +VI+ MNN KF QLQV
Sbjct: 904 QKFFQHIAIKTLSEKMSDLQVIVIMNNAKFVQLQV 938
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 294/570 (51%), Gaps = 68/570 (11%)
Query: 22 EFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP--------ILC 73
E LPV R+ IVE + +RV ++ GETG GKS+QVP FLL + + I+C
Sbjct: 567 ERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVC 626
Query: 74 TQPRRFAVVAVAKMVAKGRNCELG-----GEVGYHIGHSKHLSERSKIVFKTAGVLLDEM 128
TQPRR + V++A V + CE G GY I SE +++++ T GVLL ++
Sbjct: 627 TQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 686
Query: 129 RDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYF 188
++ GL A +I+DEVHERSV+SD +LV +K++L K++DL ++LMSAT D K+ YF
Sbjct: 687 QEDGLLA-DVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYF 745
Query: 189 ------RDLGRGERVEVLAIPSTNQRTIF---------QRRVSYLEQVT----------- 222
R GR VEV + + T F Q+ + E++T
Sbjct: 746 THCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGVK 805
Query: 223 ---ELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLH--IHKNES---- 273
E + V G + EL+ A + P HK+ DL+L ++ ++S
Sbjct: 806 KYQEYIPVQSGASPELNPFYQKYSSRTQHAILYMNP--HKINLDLILELLVYLDKSPQFR 863
Query: 274 DIEKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTE-QALMAMKICKSHR 328
+IE ++L+FLP ++Q + L+ F+ +V LHS + T+ QA M R
Sbjct: 864 NIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVR 923
Query: 329 KVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGR 388
K++LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR GR
Sbjct: 924 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 983
Query: 389 TCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPP 448
DG +RL T+ F D+ P ILR+ L L I + + P+ L KALDPP
Sbjct: 984 VRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCD---LGSPEDFLSKALDPP 1040
Query: 449 YPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEI-GMLR 507
+V+ +A++LL A + P+ T G+ LA+ ++ +++ FG I G L
Sbjct: 1041 QLQVISNAMNLLRKIGACEPNEPK----LTPLGQHLAALPVNVKIGKMLI-FGAIFGCLE 1095
Query: 508 EGILLGILMDTQPLPILHPFG--DDALFAE 535
L +M T+ P + P G D+A A+
Sbjct: 1096 PVATLAAVM-TEKSPFITPIGRKDEADLAK 1124
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 226 bits (577), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 293/568 (51%), Gaps = 64/568 (11%)
Query: 22 EFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP--------ILC 73
E LPV R+ IVE + +RV ++ GETG GKS+QVP FLL + + I+C
Sbjct: 568 ERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVC 627
Query: 74 TQPRRFAVVAVAKMVAKGRNCELG-----GEVGYHIGHSKHLSERSKIVFKTAGVLLDEM 128
TQPRR + V++A V CE G GY I E +++++ T GVLL ++
Sbjct: 628 TQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKL 687
Query: 129 RDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYF 188
++ GL + +I+DEVHERSV+SD +L+ +K++L K++DL ++LMSAT D K+ YF
Sbjct: 688 QEDGLLS-NVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYF 746
Query: 189 ------RDLGRGERVEVLAIPSTNQRT--IFQRRVSYLEQ-VTELLGVDHGMTSELSSLR 239
R GR VEV + + T + ++ Y ++ + E V +TS+ ++
Sbjct: 747 THCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINVTSKAGGIK 806
Query: 240 YCSG--PSPSMANAEIKP----------------EVHKLIHDLVLHI--HKNES----DI 275
P + A+A++ P HK+ DL+L + + ++S +I
Sbjct: 807 KYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLAYLDKSPQFRNI 866
Query: 276 EKSILVFLPTYYALEQQWHLMKPLSSFF----KVHILHSSVDTEQALMAMKICKSH-RKV 330
E ++L+FLP ++Q + L+ F+ KV LHS + T+ A + RK+
Sbjct: 867 EGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKI 926
Query: 331 ILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTC 390
+LATNIAE+ +TIP V +VID+ R+ + + + ++ S +VS++ A QR+GR GR
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 391 DGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYP 450
DG +R+ T+ F D+ P ILR+ L L I + P+ L KALDPP
Sbjct: 987 DGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCN---LGSPEDFLSKALDPPQL 1043
Query: 451 EVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEI-GMLREG 509
+V+ +A++LL A + P+ T G+ LA+ ++ +++ FG I G L
Sbjct: 1044 QVISNAMNLLRKIGACELNEPK----LTPLGQHLAALPVNVKIGKMLI-FGAIFGCLDPV 1098
Query: 510 ILLGILMDTQPLPILHPFG--DDALFAE 535
L +M T+ P P G D+A A+
Sbjct: 1099 ATLAAVM-TEKSPFTTPIGRKDEADLAK 1125
>sp|Q3MHU3|TDRD9_RAT Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus
GN=Tdrd9 PE=2 SV=3
Length = 1384
Score = 220 bits (560), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 187/663 (28%), Positives = 313/663 (47%), Gaps = 85/663 (12%)
Query: 2 GPSSPTSSCSSSYSSPFTSPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQ 61
G SP + S+ P T+ ++ LP+ +E+++ + N V +I G TG GKS+Q+PQ
Sbjct: 110 GLRSPLAKISNVACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQ 169
Query: 62 FLLAENME-----PILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKI 116
++L + I+ TQPR+ ++A+ ++K R+ LGG VGY +G K +E +++
Sbjct: 170 YVLDHYTQRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRL 229
Query: 117 VFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKND-LRVVLM 175
++ T GVLL ++ + +++ + +DEVHER+ E D +L+ V++LL + ++V+LM
Sbjct: 230 IYMTTGVLLQKIVS-AKSLMEFTHVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVILM 288
Query: 176 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMT--- 232
SAT + ++ DYF A+P N+ +Y V E+ G H +
Sbjct: 289 SATINCKQFADYF------------AVPVQNKMN-----PAY---VFEVEGKPHTIEQYY 328
Query: 233 -SELSSLRYCSGPSPSMANAEIKPEVH-------KLIHDLVLHIHKNES-------DIEK 277
++L + + P + I +V+ ++ DL + N++
Sbjct: 329 LNDLGHIYHSGLPPYRLEEPVITKDVYEVAVSLIQMFDDLDMKESGNKTWSGAQFVSERS 388
Query: 278 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVD-TEQALMAMKICKSHRKVILATN 335
S+LVFLP + L+ + +V+ LHSSV EQ + + +RK+IL+TN
Sbjct: 389 SVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 448
Query: 336 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 395
IAESSVT+P V YVID C + + D + S L W S++ +QR+GR GR G Y
Sbjct: 449 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCY 508
Query: 396 RLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVG 454
RL+ + F+ + + DH P +LR L VL + + + +P+ LL AL PP +
Sbjct: 509 RLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLD---MGEPRALLATALSPPSLSDIE 565
Query: 455 DALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREG 509
+ LL AL R P TF GR+LA +S L++ G L E
Sbjct: 566 RTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDEC 625
Query: 510 ILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQ 569
+++ + + PF + G N +G + + AF+ WQ
Sbjct: 626 LIIAAALSLKNF-FTMPFRQ----------HLDGYRNKVHFSGSSRSDCLALVEAFRAWQ 674
Query: 570 HVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAV 629
+ + L H PK E +W L+Y+ + V+ELYE++ N +
Sbjct: 675 -ACRQRGELRH-----------------PKDELDWGRLNYIQIKRIREVAELYEELKNRI 716
Query: 630 HRF 632
+F
Sbjct: 717 SQF 719
>sp|Q14BI7|TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9
PE=1 SV=3
Length = 1383
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 195/682 (28%), Positives = 323/682 (47%), Gaps = 87/682 (12%)
Query: 2 GPSSPTSSCSSSYSSPFTSPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQ 61
G SP + S+ P T+ ++ LP+ +E+++ + N V +I G TG GKS+Q+PQ
Sbjct: 110 GLRSPLAKLSNVACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQ 169
Query: 62 FLLAENME-----PILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKI 116
++L + I+ TQPR+ ++A+ ++K R+ LGG VGY +G K +E +++
Sbjct: 170 YVLDHYTQRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRL 229
Query: 117 VFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKND-LRVVLM 175
++ T GVLL ++ + +++ I +DEVHER+ E D +L+ V++LL + ++VVLM
Sbjct: 230 IYMTTGVLLQKIVS-AKSLMEFTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLM 288
Query: 176 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMT--- 232
SAT + ++ DYF A+P N+ +Y V E+ G H +
Sbjct: 289 SATINCKQFADYF------------AVPVQNKMN-----PAY---VFEVEGKPHAIEEYY 328
Query: 233 -SELSSLRYCSGPSPSMANAEIKPEVH-------KLIHDLVLHIHKNES-------DIEK 277
++L + Y SG + I +V+ ++ DL + N++
Sbjct: 329 LNDLGHI-YHSGLPYRLEEPVITKDVYEVAVSLIQMFDDLDMKESGNKTWSGAQFVSERS 387
Query: 278 SILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSVD-TEQALMAMKICKSHRKVILATN 335
S+LVFLP + L+ + +V+ LHSSV EQ + + +RK+IL+TN
Sbjct: 388 SVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN 447
Query: 336 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVY 395
IAESSVT+P V YVID C + + D + S L W S++ +QR+GR GR G Y
Sbjct: 448 IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCY 507
Query: 396 RLVTKSFFGT-LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVG 454
RL+ + F+ + + DH P +LR L +L + + + +P+ LL AL PP +
Sbjct: 508 RLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPSLSDIE 564
Query: 455 DALDLLDHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREG 509
+ LL AL R P TF GR+LA +S LV+ G L E
Sbjct: 565 RTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDEC 624
Query: 510 ILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQ 569
+++ + + PF + G N +G + + AF+ WQ
Sbjct: 625 LIIAAALSLKNF-FTMPFRQ----------HLDGYRNKVHFSGSSRSDCLALVEAFRAWQ 673
Query: 570 HVFKDKQRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAV 629
+QR + + PK E +W L+Y+ + V+ELYE++ N +
Sbjct: 674 AC---RQRGELRR---------------PKDELDWGRLNYIQIKRIREVAELYEELKNRI 715
Query: 630 HRFRPKFLGTSNGLPTYYDPYE 651
+F F+G + + PY+
Sbjct: 716 SQFN-MFVGPHHPVLDQEYPYK 736
>sp|Q16JS8|SPNE_AEDAE Probable ATP-dependent RNA helicase spindle-E OS=Aedes aegypti
GN=spn-E PE=3 SV=1
Length = 1374
Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 157/522 (30%), Positives = 268/522 (51%), Gaps = 44/522 (8%)
Query: 24 SSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRR 78
+ LP+ ++ I+ ++ EN V ++ G TGCGK++QVPQF+L E I+ TQPR+
Sbjct: 34 NKLPIRHSKDDILARIRENPVIVLEGPTGCGKTTQVPQFILEEAYHRKEYCNIIVTQPRK 93
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
A +++AK V++ R CELG VG+ +G + LS +++++ T GVLL + + A Y
Sbjct: 94 IAAMSIAKRVSEERKCELGTLVGFKVGLKECLSPDTRLLYCTTGVLLQSLINSKTMA-NY 152
Query: 139 KVIILDEVHERSVESDLVLVCVKQLL-LKKNDLRVVLMSATADITKYRDYFRDLGRGERV 197
+ILDE+HER V+ D +L+ V++ L + +V+LMSAT D + +YF+ ++V
Sbjct: 153 THVILDEIHEREVDMDFLLIVVRRFLATNSSKTKVILMSATIDSKAFAEYFKT---PKKV 209
Query: 198 EVLAIP--STNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKP 255
L P S ++ +++ + Y + + +L +D + E P S +
Sbjct: 210 GYLTAPIISVDRPRLYEVKEFYYDDLDKL-RLDFAIDYE--------NPGISSHMYTVAA 260
Query: 256 EVHKLIHDLVLHIHKNES-DIEKSILVFLPTYYALEQQWHLMKPLSSF---------FKV 305
++ + L+ ++H E + + ++L+FLP +++ H+++ + +
Sbjct: 261 KLVLVCDRLIENMHGEERMEYKPTVLIFLPGINEIDRMDHVLRETLTRIVNPKEKPNLDI 320
Query: 306 HILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 364
H LHS + EQ + K RKVIL+TNIAESS+T+P V ++ID C +F D
Sbjct: 321 HRLHSILPADEQVKVFRKPAPGQRKVILSTNIAESSITVPDVKFIIDFCLQRVLFTDTTT 380
Query: 365 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQV 423
+ W SQ+ QR+GR GR DG+VYRLV + F+ + P ILR L +
Sbjct: 381 NFSTLRTEWASQANCIQRQGRAGRVMDGRVYRLVDRRFYENQMRFSTSPEILRCPLENVI 440
Query: 424 LLICCAESKAISDPKVLLQKALDPP-YPEVVGDALDLLDHKRALQKISPRGRYEP----- 477
L E + P +L A++PP ++ L L + +Q + +G YE
Sbjct: 441 LKAKLLE---MGPPHSILALAMNPPDLSDIRNTVLQLKELGALVQTV--KGNYEQLDGDL 495
Query: 478 TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQ 519
T+ GR++A L S L++ +L E I++ M+ +
Sbjct: 496 TYMGRIMAKLPLDLRISKLIILGYIFSVLEESIIIAAGMNEK 537
>sp|Q8NDG6|TDRD9_HUMAN Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9
PE=2 SV=3
Length = 1382
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 315/657 (47%), Gaps = 73/657 (11%)
Query: 2 GPSSPTSSCSSSYSSPFTSPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQ 61
GP + SS P T+ ++ LP+ +E++V + N V +I G TG GKS+Q+PQ
Sbjct: 108 GPRPSLAKLSSVTCIPGTTYKYPDLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQ 167
Query: 62 FLLAENME-----PILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKI 116
++L ++ I+ TQPR+ ++A+ ++K R LGG VGY +G K +E +++
Sbjct: 168 YILDHYVQRSAYCSIVVTQPRKIGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRL 227
Query: 117 VFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKND-LRVVLM 175
++ T GVLL ++ + +++ II+DEVHER+ E D +L+ V++LL + ++VVLM
Sbjct: 228 IYMTTGVLLQKIVS-AKSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLM 286
Query: 176 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRT---IF--QRRVSYLEQVTELLGVDHG 230
SAT ++ DYF A+P N+ IF + + +E+ L ++H
Sbjct: 287 SATISCKEFADYF------------AVPVQNKMNPAYIFEVEGKPHSVEEYY-LNDLEHI 333
Query: 231 MTSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNES------DIEK-SILVFL 283
S+LS P + E+ + ++ DL + N++ +E+ S+LVFL
Sbjct: 334 HHSKLSP-HLLEEPVITKDIYEVAVSLIQMFDDLDMKESGNKAWSGAQFVLERSSVLVFL 392
Query: 284 PTYYALEQQWHLMKPL-SSFFKVHILHSSVD-TEQALMAMKICKSHRKVILATNIAESSV 341
P + L+ L +V+ LHSSV EQ + + +RK+IL+TNIAESSV
Sbjct: 393 PGLGEINYMHELLTSLVHKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSV 452
Query: 342 TIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS 401
T+P V YVID C + + D + S L W S++ QR+GR GR G YRLV K
Sbjct: 453 TVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKD 512
Query: 402 FF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLL 460
F+ ++ DH P +LR L +L + + + +P+ LL AL PP + + LL
Sbjct: 513 FWDNSIPDHVVPEMLRCPLGSTILKVKLLD---MGEPRALLATALSPPGLSDIERTILLL 569
Query: 461 DHKRALQKISPRGRYEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGIL 515
AL R P TF GR+LA ++ L++ G L E +++
Sbjct: 570 KEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAA 629
Query: 516 MDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDK 575
+ + FA + G N +G + + + AF+ W+ +
Sbjct: 630 LSLK-----------NFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTG 678
Query: 576 QRLDHLQQVLKFDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRF 632
+ L++ PK E W L+Y+ + V+ELYE++ + +F
Sbjct: 679 E--------LRY----------PKDELNWGRLNYIQIKRIREVAELYEELKTRISQF 717
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 213 bits (541), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 170/566 (30%), Positives = 278/566 (49%), Gaps = 72/566 (12%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRF 79
SLP+ + RE+I+ + EN V ++ GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 115 SLPIYAKREEIINAINENPVVIVKGETGCGKTTQVPQYILDEGFKSKQYCNIVVTQPRRI 174
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE--RSKIVFKTAGVLLDEMRDRGLNALK 137
A +++A V + R + G GY +G + L +++++ T GVLL+ + +
Sbjct: 175 AAISIANRVCQERQWQRGTVCGYQVGLHRQLERFADTRLLYCTTGVLLNILVNNK-TLTH 233
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKN-DLRVVLMSATADITKYRDYFRDLGRGER 196
Y I+LDEVHER E D +L+ +++LL + ++V+LMSAT + + DYF + ER
Sbjct: 234 YTHIVLDEVHERGQEMDFLLIVIRRLLATNSRHVKVILMSATINPRELSDYFAN----ER 289
Query: 197 VEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPE 256
I ++ R F Y +Q+ + G +++ SP + +
Sbjct: 290 SAPPVIDASYGRN-FTVEKYYRDQLQTINW--EGHQEDIN--------SPGITQEGYRSA 338
Query: 257 VHKLIHDLVLHIHKNESDI---------EKSILVFLPTYYALEQQWHLMKPLS------- 300
+ ++ ++ ++ +NE E SIL+FLP + ++K ++
Sbjct: 339 IKTIL--VIDNMERNERSTGKSYNQSLREGSILIFLPGVGEINNMSDMLKDMANHDSIMK 396
Query: 301 -SFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVF 359
+ + H L SS D + +RK+I+ATN+AESS+T+P V+Y+ID C +F
Sbjct: 397 FNMVRCHSLMSSDDQREIFQPSP--PGYRKIIMATNVAESSITVPDVSYIIDFCLEKVLF 454
Query: 360 WDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAILRLS 418
D S LVW S++ QR GR GR +G+VYR+VTKSF+ L ++ P +LR
Sbjct: 455 TDTFTNFSSLRLVWASKTNCRQRAGRVGRLRNGRVYRMVTKSFYQRELSEYSVPEMLRSP 514
Query: 419 LRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP- 477
L+ VL A+ + P +L AL PP + + + LL AL + G Y+P
Sbjct: 515 LQNCVL---KAKELKMGTPVEMLALALSPPNLSDICNTILLLKEVGALFP-TVDGTYDPC 570
Query: 478 ----TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILL-------GILMDTQPLPILHP 526
T++G +++ L S L++ +L E I++ GI +D+ L
Sbjct: 571 DGDITYWGTIMSKLPLDTRLSRLIILGYIFNLLDEAIIIAAGLTVRGIFVDSTRL----- 625
Query: 527 FGDDALFAEYTGCYFGGDGNTRLLTG 552
G D Y Y DG+ L G
Sbjct: 626 -GSD----NYWMHYVFADGSGSDLVG 646
>sp|Q7QCW2|SPNE_ANOGA Probable ATP-dependent RNA helicase spindle-E OS=Anopheles gambiae
GN=spn-E PE=3 SV=5
Length = 1463
Score = 209 bits (532), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 272/533 (51%), Gaps = 67/533 (12%)
Query: 24 SSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRR 78
+ L + ++ I++ + EN V ++ G TGCGK++QVPQ+LL + I+ TQPR+
Sbjct: 119 NRLTIHQSKQDILKAIRENPVVVLQGMTGCGKTTQVPQYLLEDAYNRKEWCNIVVTQPRK 178
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEM-RDRGLNALK 137
A ++A+ VA+ RNC LG VG+ +G + +SE +++ + T GVLL+++ + +++
Sbjct: 179 IAASSIARRVAEERNCALGSLVGFKVGLKEMVSEDTRLTYVTTGVLLNKLITSKSISS-- 236
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGER- 196
Y IILDEVHER V+ D +L+ V++LL + +++LMSAT + +++ YF+ G
Sbjct: 237 YTHIILDEVHEREVDMDFLLIIVRRLLATMRNTKIILMSATIESSEFAQYFKIPGPNSLF 296
Query: 197 VEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPE 256
LA+ + Q + V YLE + E L VD + E +P+
Sbjct: 297 APQLAVSNVTQHDV---SVYYLEDL-EKLRVDFTIKYE-------------------QPD 333
Query: 257 VHKLIHDLVLH--------IHKNES----DIEKSILVFLPTYYALEQQWHLMKPL----- 299
VH+ ++ L I + ES D + SI++FLP +E+ +++
Sbjct: 334 VHEKMYFLAAKVAVVCDRFIDEFESASTIDYKPSIIMFLPGINEIERMAEVLRNFLGDSN 393
Query: 300 -----SSFFKVHILHSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
+ F + LHS + +E QAL+ K +RKVIL+TNIAESS+TIP V +VID C
Sbjct: 394 VNSQEQTKFTILKLHSMLPSEEQALVFTKPSPGYRKVILSTNIAESSITIPDVKFVIDFC 453
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF--GTLEDHEC 411
+ D + W S++ QR GR GR +G+VYRLV K FF G + E
Sbjct: 454 LHRVLVADTLNNFTTLRTQWASRNNCIQRAGRCGRVMNGRVYRLVNKHFFEHGMAQSIE- 512
Query: 412 PAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISP 471
P ++R L VL + + P +L A+ PP V + + L AL + +
Sbjct: 513 PEMVRCPLSNVVLKTKLLD---MGPPHTILALAMSPPNLSDVSNTVLQLKELGALLRTA- 568
Query: 472 RGRY-----EPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQ 519
+G Y + T+ G ++++ L + LV+ +L E I++ M+ +
Sbjct: 569 KGVYDLQDGDITYLGNIMSTLPLDIHLAKLVVLGYVFSVLEEAIVIAAGMNVK 621
>sp|B0XDC4|SPNE_CULQU Probable ATP-dependent RNA helicase spindle-E OS=Culex
quinquefasciatus GN=spn-E PE=3 SV=1
Length = 1396
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/573 (29%), Positives = 279/573 (48%), Gaps = 47/573 (8%)
Query: 24 SSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRR 78
+ LP+ + +I++K+ N V ++ G TGCGK++QVPQ+LL E E I+ TQPR+
Sbjct: 56 NDLPINWNKPEILDKIRSNAVVVLQGATGCGKTTQVPQYLLEEAFERKEYCNIIVTQPRK 115
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
A +++A+ VA+ R C+LG VGY +G + +E +++++ T GVLL + + A Y
Sbjct: 116 IAAISIARRVAQERKCDLGTLVGYKVGLKEQHNEDTRLLYVTTGVLLQSLINSKTMA-TY 174
Query: 139 KVIILDEVHERSVESDLVLVCVKQLL-LKKNDLRVVLMSATADITKYRDYFRDLGRGERV 197
+ILDEVHER V+ D +L+ V++LL +V+LMSAT D + +YF+ + +
Sbjct: 175 THVILDEVHEREVDMDFLLIVVRRLLSTNSKKTKVILMSATIDAKGFSEYFKIPKKSGYL 234
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEV 257
I S + + + Y + + E L VD + E G S M N K V
Sbjct: 235 SAPVI-SVERPRLHVVQEFYFDDL-EKLKVDFQIDYE------APGISEQMYNIAAKLVV 286
Query: 258 HKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFK---------VHIL 308
+ L + + + SI++FLP +E+ ++ L + + + L
Sbjct: 287 --VCDHLKGQEFGDSLEYKPSIIIFLPGINEIEKMEGALEKLIASIQNAAQRPNLLIMKL 344
Query: 309 HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKID 367
HS++ + Q + K + RKVIL+TNIAESS+T+P + +VID C + D
Sbjct: 345 HSTLPADDQTAVFRKPGPNQRKVILSTNIAESSITVPDIKFVIDFCLQRILVTDTLTNFS 404
Query: 368 SAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLI 426
+ W S+S QR GR GR G+VYRLV + FF ++ P ILR L VL
Sbjct: 405 TLRTEWASKSNCIQRAGRAGRLMSGRVYRLVDRRFFENNMDVSTSPEILRCPLETVVLKA 464
Query: 427 CCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----TFYG 481
E + P +L A+ PP + + + + LL A+ + + +G Y+ T+ G
Sbjct: 465 KLLE---MGTPPSILALAMAPPNLDDIRNTILLLKEVGAMLR-TVKGNYDQLDGDLTYLG 520
Query: 482 RLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCYF 541
R+++ L S L++ ++ E + +G M+ + + F + Y+ +
Sbjct: 521 RIMSKLPLDIRISKLIMLGYIFSVMEEAVTIGAGMNVKNI-----FLNQNSVKTYSQKMY 575
Query: 542 GGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKD 574
DG +G + I+ A++ Q D
Sbjct: 576 WADG-----SGSDAIAILNAYTAWKSRQEQAGD 603
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 207 bits (527), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 190/661 (28%), Positives = 305/661 (46%), Gaps = 73/661 (11%)
Query: 15 SSPFTSP------EFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL---A 65
+ P TSP E+ LP+ R+++V + N V +I G TG GK++Q+PQF+L A
Sbjct: 72 TGPGTSPPSLASYEYPILPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYA 131
Query: 66 ENMEP--ILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGV 123
E P ++ TQPR+ ++A+ VA+ R C LG VGY +G K +E +K+++ T GV
Sbjct: 132 ERNIPCNLVVTQPRKIGATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGV 191
Query: 124 LLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKND-LRVVLMSATADIT 182
LL ++ +Y I +DEVHERS E D +L+ V++LL + ++V+LMSAT +
Sbjct: 192 LLQKLVSSK-TLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCI 250
Query: 183 KYRDYFRDLGRGER-----VEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSS 237
++ +YF R + EV P + YL+++ +L V + L
Sbjct: 251 EFAEYFGSPIRNQMNPAYVFEVEGAP-------YAVEEYYLDELKTMLPVGVNLDLTLPQ 303
Query: 238 LRYCSGPSPSMANAEIKP--EVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALE-QQWH 294
Y + ++A + I+ E+ H S+LVFLP ++ +
Sbjct: 304 DPYITEEMYNVAVSLIQSFDEMEAKDHRRSEQTGSTTHPERGSVLVFLPGLAEIQYMKEA 363
Query: 295 LMKPLSSFFKVHILHSSVD-TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSC 353
L K + +V+ LHS+V EQ + + +RK+IL+TNIAESSVT+P V YVID C
Sbjct: 364 LSKLVRKRLQVYPLHSTVTLEEQNGVFLVPVPGYRKIILSTNIAESSVTVPDVKYVIDFC 423
Query: 354 RSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECP 412
Q+ D + W S++ QRRGR GR G YRLVT+ F+ + + P
Sbjct: 424 LVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVSKGFCYRLVTRHFWENEIPNFSIP 483
Query: 413 AILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPR 472
+LR L +L + + + DP+ +L AL PP ++GD + + + +S +
Sbjct: 484 EMLRSPLASTLLKVKLLD---MGDPRSVLSTALTPP---ILGDIERTVLQLKQIGALSVQ 537
Query: 473 GRYEP------TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHP 526
+ TF GR+LA + L++ G L E +++ + +
Sbjct: 538 SNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSLK------- 590
Query: 527 FGDDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLK 586
+ FA + G + + + AF+ W + + K L H
Sbjct: 591 ----SFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAW-YTSRAKGELRH------ 639
Query: 587 FDETKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTY 646
PK E EW + + + V+EL+ED+ V RF +SN PT
Sbjct: 640 -----------PKDELEWGKENCIQIKRIREVAELFEDLKKRVSRFNMHISSSSN--PTD 686
Query: 647 Y 647
Y
Sbjct: 687 Y 687
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1
Length = 1362
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 287/562 (51%), Gaps = 73/562 (12%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM----EP----ILCTQPR 77
LPV + I+E + +RV ++ GETG GKS+QVPQFLL + + P I+CTQPR
Sbjct: 566 LPVFARGNFILETLKRHRVIVVAGETGSGKSTQVPQFLLEDLLFNGGSPGKCNIVCTQPR 625
Query: 78 RFAVVAVAKMVAKGRNCELG--GE---VGYHIGHSKHLSERSKIVFKTAGVLLDEMR-DR 131
R + +++A V + C+ G G+ GY I E +++++ T G+LL +++ D
Sbjct: 626 RISAMSLATRVCEELGCDSGPGGKNSLCGYQIRMESRTGEATRLLYCTTGILLRKLQEDS 685
Query: 132 GLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYF--- 188
L + + II+DEVHER+V+SD +L+ ++++L K++DL +VLMSAT D K+ YF
Sbjct: 686 MLKNISH--IIVDEVHERTVQSDFLLIILREILHKRSDLHLVLMSATVDCEKFSSYFTHC 743
Query: 189 ---RDLGRGERVEVLAIPSTNQRTIF---------QRRVSYLEQVT-------------- 222
R GR VEV + + T F Q+ + E++T
Sbjct: 744 PIIRISGRTFPVEVFHLEDVVEATGFVLEQDSEYCQKFLEDEEEITLSVTGKGGSSKKYQ 803
Query: 223 ELLGVDHGMTSELSSL--RYCSGPSPSMANAEIKPEVHKLIHDLVLH------IHKNESD 274
E + G +L + RY S +A + +K+ DL+L I +
Sbjct: 804 EFIPAQSGTGLDLGARYQRYSS----QTRHAVLYMNPNKINLDLILELLVFLDISPEYRN 859
Query: 275 IEKSILVFLPTYYALEQQWHLMKPLSSF-----FKVHILHSSVDTE-QALMAMKICKSHR 328
+E ++L+FLP ++Q + ++ F +K+ LHS + ++ QA + R
Sbjct: 860 VEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRYKLIALHSILSSQDQAEAFILPPAGTR 919
Query: 329 KVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGR 388
K++LATNIAE+ +TIP V +VID+ R+ + + + ++ S ++S++ A QR+GR GR
Sbjct: 920 KIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAGR 979
Query: 389 TCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPP 448
+G +RL T+ F + ++ P ILR+ L L I + + P+ L KALDPP
Sbjct: 980 VRNGYCFRLYTRERFESFMEYSVPEILRVPLEELCLHIMKCD---LGSPEDFLSKALDPP 1036
Query: 449 YPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEI-GMLR 507
+V+ +A+ LL A + P+ T G+ LA+ ++ +++ FG I G L
Sbjct: 1037 QLQVISNAMSLLRKIGACELSQPK----LTPLGQHLAALPVNVKIGKMLI-FGAIFGCLD 1091
Query: 508 EGILLGILMDTQPLPILHPFGD 529
L M T+ P + P G+
Sbjct: 1092 AVATLAATM-TEKSPFVTPIGE 1112
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 234/445 (52%), Gaps = 35/445 (7%)
Query: 22 EFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFAV 81
E ++LP+ +I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR A
Sbjct: 160 ERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIAC 219
Query: 82 VAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
+++AK V + G +VGY I S +KIVF T G+LL +++ R + +Y+V+
Sbjct: 220 ISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ-REPSLPQYQVL 278
Query: 142 ILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
I+DEVHER + +D +L +++LL ++ DL+V+LMSAT +I+ + YF V+
Sbjct: 279 IVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYF------SHAPVVQ 332
Query: 202 IPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLI 261
+P +F V Y Q + LR + + PE
Sbjct: 333 VPG----RLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEA-----IDNKYPPEERG-- 381
Query: 262 HDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVDTEQALMAM 321
DL++ + ++I ++L Y +L Q+W ++ PL S V D A +
Sbjct: 382 -DLLVFL-SGMAEI-TTVLDAAQAYASLTQRWVVL-PLHSALSVSDQDKVFDVAPAGV-- 435
Query: 322 KICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQ 381
RK IL+TNIAE+SVTI + +V+DS + ++ +D K+ + W+SQ+ AEQ
Sbjct: 436 ------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQ 489
Query: 382 RRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLL 441
R+GR GRT G YRL +S + + P I R++L VL + +S ++ DP+
Sbjct: 490 RKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQM---KSMSVGDPRTF- 545
Query: 442 QKALDPPYPEVVGDALDLLDHKRAL 466
++PP P V A+ L + AL
Sbjct: 546 -PFIEPPPPASVETAILYLQEQGAL 569
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 233/458 (50%), Gaps = 61/458 (13%)
Query: 22 EFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEPILCTQPRRFAV 81
E ++LP+ +I++ + E++V ++ G+TGCGKS+QVPQ+LLA + CTQPRR A
Sbjct: 158 ERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIAC 217
Query: 82 VAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
+++AK V + G +VGY I S +KIVF T G+LL +++ R + +Y+V+
Sbjct: 218 ISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQ-REPSLPQYEVL 276
Query: 142 ILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
I+DEVHER + +D +L +++LL + DL+V+LMSAT +I+ + YF + V+
Sbjct: 277 IVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSN------APVVQ 330
Query: 202 IPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLI 261
+P +F V Y Q E P+ + +E K + +
Sbjct: 331 VPG----RLFPITVVYQPQEAE----------------------PTTSKSE-KLDPRPFL 363
Query: 262 HDLVLHIHKNESDIEKSILVFLP-------------TYYALEQQWHLMKPLSSFFKVHIL 308
L HK + +LVFL TY + Q+W ++ PL S V
Sbjct: 364 RVLESIDHKYPPEERGDLLVFLSGMAEISAVLEAAQTYASHTQRWVVL-PLHSALSVADQ 422
Query: 309 HSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDS 368
D + RK IL+TNIAE+SVTI + +V+DS + ++ +D K+
Sbjct: 423 DKVFDVAPPGV--------RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQR 474
Query: 369 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICC 428
+ W+SQ+ AEQR+GR GRT G +RL +S + + P I R++L VL +
Sbjct: 475 LQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQM-- 532
Query: 429 AESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL 466
+S ++ DP+ ++PP P + A+ L + AL
Sbjct: 533 -KSMSVGDPRTF--PFIEPPPPASLETAILYLRDQGAL 567
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 261/531 (49%), Gaps = 58/531 (10%)
Query: 22 EFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL-------AENMEPILCT 74
E LP R KI++ + ++V +I GETG GKS+QV QF+L ++++ ++CT
Sbjct: 573 EREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCT 632
Query: 75 QPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLN 134
QPRR + +++A+ VA R+ +G EVGY + K +S+ + + F T G+LL ++ GL
Sbjct: 633 QPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLG 692
Query: 135 ALK-YKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGR 193
L +++DEVHERS+E+D++L +K ++ + +L+V+LMSAT + ++ YF + G
Sbjct: 693 FLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAGH 752
Query: 194 GERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEI 253
L I + RT F + Y+E L D P E
Sbjct: 753 ------LHI---HGRT-FPIKDYYIEDFAPKLNEDDDEED-----------VPRRKKKEY 791
Query: 254 KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPL-SSFFKVHILHSSV 312
+ + H LI LV I SILVFLP + + +K S F+V LH+S+
Sbjct: 792 EIDYH-LISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFEVLPLHASL 850
Query: 313 DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
+T + K + RK+I ATNIAE+S+TI V VIDS R Q+ +DV R + + +
Sbjct: 851 NTSEQRRCFKTY-TKRKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKET 909
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTKSF--FGTLEDHECPAILRLSLRLQVLLICCAE 430
W S++ +QRRGR GR G Y+L T+ F G L P +LR +L QV L
Sbjct: 910 WASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGML-GQTPPEVLRTALS-QVCLNVVPL 967
Query: 431 SKAISDP---------KVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYG 481
K S K + +DPP V AL K+ +Q + + T G
Sbjct: 968 VKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLAL-----KKLIQVGALTVSEDLTGLG 1022
Query: 482 RLLASFSLSFDASVLVLKFGEI-GMLREGILLGILMDTQPLPILHPF-GDD 530
L S + L++ FG I G L + + ++ T+ PF GDD
Sbjct: 1023 EYLVSLPIDLKLGKLLV-FGSIFGYLEPALTITAILSTKS-----PFLGDD 1067
>sp|B4GEU5|SPNE_DROPE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
persimilis GN=spn-E PE=3 SV=1
Length = 1434
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 261/539 (48%), Gaps = 69/539 (12%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL------AENMEPILCTQPRR 78
SLP+ + RE+I+ + EN V ++ GETGCGK++QVP L A+ I+ TQPRR
Sbjct: 115 SLPIYAKREEIINAINENPVVIVKGETGCGKTTQVPPILFWMMVSKAKQYCNIVVTQPRR 174
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE--RSKIVFKTAGVLLDEMRDRGLNAL 136
A +++A V + R + G GY +G + L +++++ T GVLL+ + +
Sbjct: 175 IAAISIANRVCQERQWQPGTVCGYQVGLHRQLERFADTRLLYCTTGVLLNILVNNK-TLT 233
Query: 137 KYKVIILDEVHERSVESDLVLVCVKQLLLKKN-DLRVVLMSATADITKYRDYFRDLGRGE 195
Y I+LDEVHER E D +L+ +++LL + ++V+LMSAT + + DYF +
Sbjct: 234 HYTHIVLDEVHERGQEMDFLLIVIRRLLATNSRHVKVILMSATINPRELSDYFAN----- 288
Query: 196 RVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKP 255
E A P SY T V+ +L S+ + G + + I
Sbjct: 289 --ESSAPPVIA--------ASYGRNFT----VEKYYRDQLQSINW-EGHQEDINSPGITQ 333
Query: 256 EVHKLIHDLVLHIHK------------NESDIEKSILVFLPTYYALEQQWHLMK------ 297
E ++ +L I N+S E SIL+FLP + ++K
Sbjct: 334 EGYRSAIKTILVIDNMERNERGTGKSYNQSLREGSILIFLPGVGEINNMSDMLKDMANHD 393
Query: 298 PLSSF--FKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRS 355
P+ F + H L +S D + +RK+I+ATN+AESS+T+P V+Y+ID C
Sbjct: 394 PIMKFNMVRCHSLMTSEDQREIFQPSP--PGYRKIIMATNVAESSITVPDVSYIIDFCLE 451
Query: 356 LQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAI 414
+ D + S L W S++ QR GR GR +G+VYR+VTKSF+ L ++ P +
Sbjct: 452 KVLVTDTSTNFSSLRLAWASKTNCRQRAGRVGRLRNGRVYRMVTKSFYQRELSEYSVPEM 511
Query: 415 LRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGR 474
LR L+ VL A+ + P +L AL PP + + + +L AL + G
Sbjct: 512 LRSPLQNCVL---KAKELKMGTPVEMLALALSPPNLSDICNTILMLKEVGALFP-TMDGT 567
Query: 475 YEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILL-------GILMDTQPL 521
Y+P T++G +++ L S L++ ++ E I++ GI +D+ L
Sbjct: 568 YDPRDGDITYWGTIMSKLPLDTHLSRLIILGYVFNLVDEAIIIAAGLTVRGIYIDSARL 626
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle
PE=2 SV=2
Length = 1293
Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 287/600 (47%), Gaps = 83/600 (13%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE-------NMEPILCTQPRR 78
LP+ ++R +I+ + +N V +I G TGCGK++Q+ Q++L + I TQPRR
Sbjct: 384 LPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQPRR 443
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALK 137
+ ++VA+ VA+ R +LG VGY + S I+F T GVLL ++ + GL +
Sbjct: 444 ISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL-EAGLRGVS 502
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYF------RDL 191
+ II+DE+HER V SD +LV ++ ++ DL V+LMSAT D TK+ YF
Sbjct: 503 H--IIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVP 560
Query: 192 GRGERVEVLAIPSTNQRTIF------QRRVSYLEQVTELLGVDHGMT----SELSSLRYC 241
GR V+ + Q T F +R+ +E +LL D +++ +Y
Sbjct: 561 GRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYS 620
Query: 242 SGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPL-- 299
+MA +L+ L++HI +I +ILVFLP + + + LMK L
Sbjct: 621 QKTRNAMAMLSESDVSFELLEALLMHIKS--KNIPGAILVFLPGWNLI---FALMKFLQN 675
Query: 300 ------SSFFKVHILHSSV-DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS 352
+S +++ HS + EQ + + + K+IL+TNIAE+S+TI + +VID
Sbjct: 676 TNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDI 735
Query: 353 CRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECP 412
C++ + + + S VW S++ EQR+GR GR G + L +++ F LED+ P
Sbjct: 736 CKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTP 795
Query: 413 AILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPR 472
+ R L L I +I L KAL+PP + V +A LL R L
Sbjct: 796 EMFRTPLHEMALTIKLLRLGSIHH---FLSKALEPPPVDAVIEAEVLLREMRCLD----- 847
Query: 473 GRYEPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDAL 532
E T GRLLA + + G++ ++LG + L A+
Sbjct: 848 ANDELTPLGRLLARLPIE-------PRLGKM------MVLGAVFGCADLM--------AI 886
Query: 533 FAEYTGCY---FGGD-GNTRL------LTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQ 582
A Y+ + F D G RL L+G K + + A Q W+ ++KQR +H++
Sbjct: 887 MASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWR---REKQRGEHME 943
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 179/659 (27%), Positives = 298/659 (45%), Gaps = 110/659 (16%)
Query: 16 SPFTSPEFS-----------SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLL 64
+PFT EF+ LPV + R++ ++ N++ + VGETG GK++Q+PQF+L
Sbjct: 72 NPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVL 131
Query: 65 AENM-----EPILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFK 119
+ M + CTQPRR A ++VA+ VA+ + +LG EVGY I S ++ + +
Sbjct: 132 FDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYM 191
Query: 120 TAGVLLDE-MRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSAT 178
T G+LL E M D L+ +Y IILDE HER++ +D+++ +KQ++ ++ DL++++MSAT
Sbjct: 192 TDGMLLREAMEDHDLS--RYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSAT 249
Query: 179 ADITKYRDYFRDL------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMT 232
D K++ YF D GR VE+ P FQR YL+ + H
Sbjct: 250 LDAEKFQRYFNDAPLLAVPGRTYPVELYYTPE------FQR--DYLDSAIRTVLQIHATE 301
Query: 233 SELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL--E 290
L + +G + E+ + + L + + L P Y +L
Sbjct: 302 EAGDILLFLTG----------EDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPH 351
Query: 291 QQWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVI 350
QQ + +P + RKV+++TNIAE+S+TI + YV+
Sbjct: 352 QQQRIFEPAPESHN-------------------GRPGRKVVISTNIAETSLTIDGIVYVV 392
Query: 351 DSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVT-KSFFGTLEDH 409
D S Q ++ +++S + +S++ A+QR GR GRT G+ +RL T ++F L +
Sbjct: 393 DPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQ 452
Query: 410 ECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKI 469
P ILR +L VL E K + ++ +DPP PE + AL+ L++ L +
Sbjct: 453 SYPEILRSNLSSTVL-----ELKKLGIDDLVHFDFMDPPAPETMMRALEELNY---LACL 504
Query: 470 SPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGD 529
G P GRL + F L +V+++ E +E IL + M + P + P D
Sbjct: 505 DDEGNLTP--LGRLASQFPLDPMLAVMLIGSFEFQCSQE-ILTIVAMLSVPNVFIRPTKD 561
Query: 530 DALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLCAFQFWQHVFKDKQRLDHLQQVLKFDE 589
+ + DG+ + + N+ H FK + ++
Sbjct: 562 KKRADDAKNIFAHPDGD---------HITLLNVY------HAFKSDEAYEYGIH------ 600
Query: 590 TKVTASLLPKIEEEWCSLHYLVQSSLHHVSELYEDILNAVHRFRPKFLGTSNGLPTYYD 648
+WC HYL SL + + ++R+ + T P Y+D
Sbjct: 601 -------------KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFD 646
>sp|B3M383|SPNE_DROAN Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
ananassae GN=spn-E PE=3 SV=1
Length = 1429
Score = 196 bits (499), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 157/522 (30%), Positives = 255/522 (48%), Gaps = 59/522 (11%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRF 79
+LP+ + RE IV + ++V ++ GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 110 NLPIYAKREVIVNAINTHQVVILKGETGCGKTTQVPQYILDEGFKSGQYCNIVVTQPRRI 169
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEM-RDRGLNALK 137
+++A V++ R E Y +G H K E +++++ T GVLL+ + R++ L
Sbjct: 170 GAISIANRVSQERMWEPDTVCSYQVGLHRKQHLEDTRLLYCTTGVLLNSLIRNKTLT--H 227
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKN-DLRVVLMSATADITKYRDYFRDLGRGER 196
Y I+LDEVHER + D +L+ V++LL + ++V+LMSAT D ++ DYF +
Sbjct: 228 YTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKVILMSATIDTREFCDYF-----STK 282
Query: 197 VEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPE 256
V V + S + R+ S ++ +L S+ + P A I E
Sbjct: 283 VSVPPVISASH----GRKHS----------IEKFYRDQLGSINWKDDPDDGY-QARIPDE 327
Query: 257 VHKLIHDLVLHIHK-------------NESDIEKSILVFLPTYYALEQQWHLM------K 297
+K ++L + +++ + ++L+FLP Y ++ + +
Sbjct: 328 AYKAAVKIILVVDNMERQAANQSEQSYDDAKSQGAVLIFLPGIYEIDNMAESLGNMTKEE 387
Query: 298 PLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQ 357
P F V Q + RK+ILATNIAESS+T+P V+YVID C +
Sbjct: 388 PSMKLFIVRCFSLMTPDAQRDVFSPPPSGFRKIILATNIAESSITVPDVSYVIDFCLTKV 447
Query: 358 VFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAILR 416
+ D S L W S++ QR GR GR G+VYR+V K F+ T + + P +LR
Sbjct: 448 LVTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVHKLFYKTNMTEFGVPEMLR 507
Query: 417 LSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRY- 475
L L+ VL A+ I+ P +L AL PP + + + LL AL + G Y
Sbjct: 508 LPLQNSVL---KAKLLDIAPPIEMLALALSPPNLSDIQNTILLLKEVGALFP-TVDGEYC 563
Query: 476 ----EPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLG 513
+ TF+G +++ L S L++ +L E I++
Sbjct: 564 EVDGDITFWGIIMSRLPLDTRLSRLIILGYVFNLLEEAIVIA 605
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
grimshawi GN=spn-E PE=3 SV=1
Length = 1434
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 260/523 (49%), Gaps = 46/523 (8%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRF 79
SLP+ + RE+I++ + EN V ++ GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 116 SLPIYAQREQIMKAIKENPVVILKGETGCGKTTQVPQYILDEAFKKREFCNIVVTQPRRI 175
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
A +++A V + R + G Y +G H + S +++++ T GVLL+ + R Y
Sbjct: 176 AAISIANRVCQERRWQPGTVCSYQVGLHKQSNSADTRLLYCTTGVLLNNL-IRLKTLTHY 234
Query: 139 KVIILDEVHERSVESDLVLVCVKQLL-LKKNDLRVVLMSATADITKYRDYFRDLGRGERV 197
I+LDEVH+R + D +L+ V++LL L ++V+LMSAT D ++ YF V
Sbjct: 235 THIVLDEVHDRDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFCKYFASCKSMPPV 294
Query: 198 EVLAIPSTNQR-----TIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAE 252
+ +++ R ++ ++ + TE + G+T E R + N E
Sbjct: 295 ----VAASHGRKYPLVKYYRDQLKNINWKTEPQQREPGITHE--GYRDAVKILLVIDNME 348
Query: 253 IKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL----EQQWHLMKPLSSFFKVHIL 308
K E E+ S+L+FLP + E H+M S K+ I+
Sbjct: 349 RKAEGQS-------EQSYEEAKRTGSVLIFLPGVNEIDTMAEHIEHVMNE-SPNIKITIV 400
Query: 309 --HS--SVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 364
HS S D+++ + + HRKVIL TNIAESS+T+ V+YVID C + + D
Sbjct: 401 RCHSLMSSDSQEDVFQPPLS-GHRKVILTTNIAESSITVTDVSYVIDFCLAKVMHIDTAS 459
Query: 365 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQV 423
L W S+ QR GR GRT G+VYR+VTK+F+ +++ P +LR L+ V
Sbjct: 460 NFSCLCLEWASKVNCRQRAGRVGRTRSGRVYRMVTKAFYMEEMQEFGIPEMLRSPLQSSV 519
Query: 424 LLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----T 478
L A+ + P +L A+ PP + + + LL AL + G YE T
Sbjct: 520 LK---AKELDMGGPSEILALAMSPPNLTDIHNTVLLLKEVGALY-TTVDGVYEQLDGDLT 575
Query: 479 FYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPL 521
++G +++ F L S L++ L E I++ M + L
Sbjct: 576 YWGTIMSRFPLDVRLSRLIILGYIFNCLDEAIIIAAGMSVRSL 618
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 244/490 (49%), Gaps = 40/490 (8%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRR 78
LPV +I+E + +N V +I G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 385 LPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRR 444
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALK 137
+ V+VA+ VA R E G GY + L + I+F T GVLL ++ + G+ +
Sbjct: 445 ISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGIS 503
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRD------L 191
+ +I+DE+HER + +D +LV ++ ++ ++R+VLMSAT D + + +YF +
Sbjct: 504 H--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVY 561
Query: 192 GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSL---RYCSGPSPSM 248
GR V+ + Q T F ++ + + + + Y + SM
Sbjct: 562 GRTFPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYGAETRISM 621
Query: 249 ANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSF-FK 304
A K +LI L+L+I ++ ++LVFLP + Y +++ + S ++
Sbjct: 622 AQLNEKETPFELIEALLLYIET--LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQ 679
Query: 305 VHILHSSVDTEQALMAMKICKSH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVN 363
+ LHS + E+ S K+IL+TNIAE+S+TI V YVIDSC+ + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 364 RKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQV 423
+ + VW S++ EQR+GR GR G + L +++ F LE H P + R L
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIA 799
Query: 424 LLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR------ 474
L I I L KA++PP + V +A L LD A +++P GR
Sbjct: 800 LSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLP 856
Query: 475 YEPTFYGRLL 484
EP F G+++
Sbjct: 857 IEPRF-GKMM 865
>sp|Q9VF26|SPNE_DROME Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
melanogaster GN=spn-E PE=2 SV=1
Length = 1434
Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 159/548 (29%), Positives = 257/548 (46%), Gaps = 45/548 (8%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRF 79
+L + + RE+I+ + + V +I GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 114 NLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRI 173
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
A +++A V + R + + +G H + E +++++ T GVLL+ + + Y
Sbjct: 174 AAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNK-TLTHY 232
Query: 139 KVIILDEVHERSVESDLVLVCVKQLLLKKN-DLRVVLMSATADITKYRDYFRDLGRGERV 197
I+LDEVHER D +L+ V++LL + ++++LMSAT D + DYF
Sbjct: 233 THIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTN----- 287
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQVTELL----GVDHGMTSELSSLRYCSGPS--PSMANA 251
+ + +TN R Y +Q+ ++ V H E++ Y + + N
Sbjct: 288 SIPPVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNM 347
Query: 252 EIKPEVH-KLIHDLVLHIHKNESDIEKSILVFLPTYYALE---QQWHLMKPLSSFFKVHI 307
E K + + +D L ++L+FLP Y ++ + M KV I
Sbjct: 348 ERKAAIQSRQSYDEALRY--------GAVLIFLPGIYEIDTMAENLTCMLENDPNIKVSI 399
Query: 308 LHS---SVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 364
+ Q + RK+IL TNIAESS+T+P V+YVID C + D
Sbjct: 400 VRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTAS 459
Query: 365 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQV 423
S L W S++ QR GR GR G+VYR+V K F+ + + P +LRL L+ V
Sbjct: 460 SFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSV 519
Query: 424 LLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----T 478
L A+ + P +L AL PP + + + LL AL ++ G Y+P T
Sbjct: 520 LK---AKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALY-LTVDGIYDPLDGDLT 575
Query: 479 FYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTG 538
++G +++ L S L++ ML E I++ + T P H G L +
Sbjct: 576 YWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLST-PGLFAHEGGRSQLGDSFWM 634
Query: 539 CYFGGDGN 546
Y DG+
Sbjct: 635 HYIFSDGS 642
>sp|B4PRJ9|SPNE_DROYA Probable ATP-dependent RNA helicase spindle-E OS=Drosophila yakuba
GN=spn-E PE=3 SV=1
Length = 1436
Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 253/521 (48%), Gaps = 57/521 (10%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRF 79
+LP+ + RE+I+ + N V ++ GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 113 NLPIYAKREEILAAINANPVVILKGETGCGKTTQVPQYILDEGYKSGKYCNIVVTQPRRI 172
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEM-RDRGLNALK 137
A +++A V + R + Y +G H E +++++ T GVLL+ + R++ L
Sbjct: 173 AAISIANRVCQEREWQQDTVCSYQVGLHRPTSLEDTRLLYCTTGVLLNNLIRNKTLT--H 230
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKN-DLRVVLMSATADITKYRDYFRDL----- 191
Y I+LDEVHER + D +L+ V++LL + ++++LMSAT D + DYF
Sbjct: 231 YTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKIILMSATIDARELSDYFTTTNSIPP 290
Query: 192 ------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPS 245
GR +E +Q + + +Q+ + DHG + + +
Sbjct: 291 VISASHGRKHSIEKFY---RDQMGSIKWKEEEDDQLVPQIN-DHGYRAAVKIIMV----- 341
Query: 246 PSMANAEIKPEVH-KLIHDLVLHIHKNESDIEKSILVFLPTYYALE---QQWHLMKPLSS 301
+ N E + +H ++ +D L ++L+FLP Y ++ + LM
Sbjct: 342 --IDNMEREGAIHSRMSYDEALRY--------GAVLIFLPGIYEIDTMAENITLMLENDR 391
Query: 302 FFKVHILHS---SVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQV 358
KV I+ Q + RK+IL TNIAESS+T+P V+YVID C + +
Sbjct: 392 NVKVFIVRCFSLMTPENQRDVFHPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLTKVL 451
Query: 359 FWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAILRL 417
D S L W S++ QR GR GR G+VYR+V KSF+ + + P +LRL
Sbjct: 452 VTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKSFYQREMSEFGIPEMLRL 511
Query: 418 SLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRY-- 475
L+ VL A+ + P +L AL PP + + + LL AL ++ G Y
Sbjct: 512 PLQNSVLR---AKELEMGSPVEILALALSPPNLSDIQNTILLLKEVGAL-FLTVDGVYNA 567
Query: 476 ---EPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLG 513
+ T++G +++ L S L++ +L E I++
Sbjct: 568 MDGDVTYWGTIMSRLPLDPRLSRLIILGYVFNLLEEAIIMA 608
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 186 bits (472), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 262/554 (47%), Gaps = 53/554 (9%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM-----EPILCTQPRRFA 80
LPV RE+ ++ EN++ + VGETG GK++Q+PQF+L + + I CTQPRR A
Sbjct: 75 LPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVA 134
Query: 81 VVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYK 139
++VAK VA + +LG EVGY+I + + + T G+LL E M D L+ +Y
Sbjct: 135 AMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLS--RYS 192
Query: 140 VIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEV 199
IILDE HER++ +D+++ +K+L ++ DL++++MSAT D K++ YF D +
Sbjct: 193 CIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFD------APL 246
Query: 200 LAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHK 259
LA+P Y Q E ++ + + L + GP + + E+
Sbjct: 247 LAVPGRTYPVEI-----YYTQEPERDYLEAALRTVL-QIHVEEGPGDILVFLTGEEEIED 300
Query: 260 LIHDLVLHIHKNESDIEKSILVFLPTYYAL--EQQWHLMKPLSSFFKVHILHSSVDTEQA 317
+ L + L P Y +L QQ + +P + DT+
Sbjct: 301 ACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEP-----------TPEDTKSG 349
Query: 318 LMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQS 377
RKV+++TNIAE+S+TI + YV+D S Q ++ +++S + +S++
Sbjct: 350 Y--------GRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKA 401
Query: 378 QAEQRRGRTGRTCDGQVYRLVT-KSFFGTLEDHECPAILRLSLRLQVLLICCAESKAISD 436
A+QR GR GRT G+ +RL T ++F L + P ILR +L VL E K +
Sbjct: 402 SAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVL-----ELKKLGI 456
Query: 437 PKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDASVL 496
++ +DPP PE + AL+ L++ L + G P GR + F L + +V+
Sbjct: 457 DDLVHFDYMDPPAPETMMRALEELNY---LNCLDDNGDLTP--LGRKASEFPLDPNLAVM 511
Query: 497 VLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGNTRLLTGRKEM 556
+++ E E + L L+ P + P L E + DG+ L
Sbjct: 512 LIRSPEFYCSNEVLSLTALLSV-PNVFVRPNSARKLADEMRQQFTHPDGDHLTLLNVYHA 570
Query: 557 VIMGNLCAFQFWQH 570
G A W H
Sbjct: 571 YKSGEGTADWCWNH 584
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 250/535 (46%), Gaps = 63/535 (11%)
Query: 2 GPSSPTSSCSSSYSSPFTSPEFSS----LPVMSLREKIVEKVLENRVTLIVGETGCGKSS 57
G + P +++P+ S LP+ R I+ R +IVGETGCGKS+
Sbjct: 49 GAAPPIEEQLKVHNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKST 108
Query: 58 QVPQFLL----AENMEPILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSER 113
QVPQFLL A + I+ TQPRR AVV +A VA+ ++C LG +VGY + +
Sbjct: 109 QVPQFLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKD 168
Query: 114 SKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVV 173
+K+ F T G+LL E+ L + KY +I++DE HERS +D++L +++++ +NDLR++
Sbjct: 169 TKVKFMTDGLLLREILADPLLS-KYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRII 227
Query: 174 LMSATADITKYRDYFR--DLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGM 231
+ SAT D ++D+F + G ++ + I S R T + V H
Sbjct: 228 VSSATLDAELFKDFFEMNETGNSDK-DTAGIISVEGR-------------THPVAVHHTK 273
Query: 232 TSELSSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQ 291
TS YC D V++IHK+E+ ILVFL +E
Sbjct: 274 TSVPD---YCQSAV-----------------DTVINIHKHEN--PGDILVFLTGQDEVED 311
Query: 292 QWHLMKPLSSFFKVHILHSSVDTEQALMAMKICKSH-------RKVILATNIAESSVTIP 344
++ L+ K V AL A + K+ RKV++ATNIAE+S+TIP
Sbjct: 312 VCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIP 371
Query: 345 KVAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG 404
+ YVID+ +++ V VS++ AEQR GR GR G+ YRL +S F
Sbjct: 372 GICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFE 431
Query: 405 TLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKR 464
+ P I R + +L + KA+ V L PP + + L+LL
Sbjct: 432 RFAEGTVPEIQRCQMASTILQL-----KALGVQNVHRFHYLSPPPSWAMINGLELLYALG 486
Query: 465 ALQKISPRGRYEPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQ 519
A+ + S + G +A F L S +LK E G E + + +M Q
Sbjct: 487 AIDETSQL----TSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQ 537
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 242/501 (48%), Gaps = 62/501 (12%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRR 78
LPV +I+E + +N V +I G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 388 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRR 447
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALK 137
+ V+VA+ VA R E G GY + L + I+F T GVLL ++ + G+ +
Sbjct: 448 ISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGIS 506
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRD------L 191
+ +I+DE+HER + +D +LV ++ ++ ++R+VLMSAT D + + +YF +
Sbjct: 507 H--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVY 564
Query: 192 GRGERVEVLAIPSTNQRTIF--------------QRRVSYLEQVTELLGVDHGMTSELSS 237
GR V+ + Q T F + G ++G + L
Sbjct: 565 GRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYGPETRL-- 622
Query: 238 LRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWH 294
SM+ K +LI L+ +I ++ ++LVFLP + Y +++
Sbjct: 623 ---------SMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLE 671
Query: 295 LMKPLSSF-FKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDS 352
+ S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDS
Sbjct: 672 MNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDS 731
Query: 353 CRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECP 412
C+ + + + + VW S++ EQR+GR GR G + L +++ F LE H P
Sbjct: 732 CKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTP 791
Query: 413 AILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKI 469
+ R L L I I L KA++PP + V +A L LD A ++
Sbjct: 792 EMFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDEL 848
Query: 470 SPRGR------YEPTFYGRLL 484
+P GR EP F G+++
Sbjct: 849 TPLGRILAKLPIEPRF-GKMM 868
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 242/501 (48%), Gaps = 62/501 (12%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRR 78
LPV +I+E + +N V +I G TGCGK++QVPQF+L + ++ I+ TQPRR
Sbjct: 388 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRR 447
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALK 137
+ V+VA+ VA R E G GY + L + I+F T GVLL ++ + G+ +
Sbjct: 448 ISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGIS 506
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRD------L 191
+ +I+DE+HER + +D +LV ++ ++ ++R+VLMSAT D + + +YF +
Sbjct: 507 H--VIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVY 564
Query: 192 GRGERVEVLAIPSTNQRTIF--------------QRRVSYLEQVTELLGVDHGMTSELSS 237
GR V+ + Q T F + G ++G + L
Sbjct: 565 GRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYGPETRL-- 622
Query: 238 LRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWH 294
SM+ K +LI L+ +I ++ ++LVFLP + Y +++
Sbjct: 623 ---------SMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLE 671
Query: 295 LMKPLSSF-FKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDS 352
+ S +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDS
Sbjct: 672 MNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDS 731
Query: 353 CRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECP 412
C+ + + + + VW S++ EQR+GR GR G + L +++ F LE H P
Sbjct: 732 CKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTP 791
Query: 413 AILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKI 469
+ R L L I I L KA++PP + V +A L LD A ++
Sbjct: 792 EMFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAVIEAEHTLRELDALDANDEL 848
Query: 470 SPRGR------YEPTFYGRLL 484
+P GR EP F G+++
Sbjct: 849 TPLGRILAKLPIEPRF-GKMM 868
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 237/493 (48%), Gaps = 70/493 (14%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE----NMEPILCTQPRRFAV 81
LPV LR++ +E V +N++ +++GETG GK++Q+ Q+L E + + I CTQPRR A
Sbjct: 510 LPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAA 569
Query: 82 VAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
++VAK VA+ C +G EVGY I S ++I + T G+L E + D L+ KY V
Sbjct: 570 MSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLS--KYSV 627
Query: 141 IILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDL------GRG 194
IILDE HER+V +D++ +K +LK+ DL++++ SAT D ++ YF GR
Sbjct: 628 IILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRS 687
Query: 195 ERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIK 254
VE++ Q YL+ + H L + +G + EI
Sbjct: 688 YPVEIMYTK--------QPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEIL 739
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL--EQQWHLMKPLSSFFKVHILHSSV 312
E K++ D + LV LP Y AL E Q + +P
Sbjct: 740 YERSKMLGDSIPE------------LVILPVYSALPSEIQSRIFEPAPP----------- 776
Query: 313 DTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
RKV++ATNIAE+S+TI + YV+D Q +D +DS +
Sbjct: 777 -------------GGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVT 823
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAES 431
+SQ+QA QR GR GRT G+ YRL T+S + + P I R +L +L++
Sbjct: 824 PISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILML----- 878
Query: 432 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSF 491
KA+ +L +DPP + + AL L AL + G P GR +A F +
Sbjct: 879 KAMGINDLLNFDFMDPPPAQTMIAALQNL---YALSALDDEGLLTP--LGRKMADFPMEP 933
Query: 492 DASVLVLKFGEIG 504
S +++ E+G
Sbjct: 934 QLSKVLITSVELG 946
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 237/475 (49%), Gaps = 33/475 (6%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPR 77
SLPV E+I+ V + V +I G TGCGK++QVPQ++L E + I+ TQPR
Sbjct: 389 SLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPR 448
Query: 78 RFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNAL 136
R + V+VA+ VA R E+G GY + L + ++F T GVLL ++ + G+ +
Sbjct: 449 RISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL-ESGIRGI 507
Query: 137 KYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRD------ 190
+ +I+DE+HER + +D +LV ++ ++ ++RV+LMSAT D + + +YF +
Sbjct: 508 SH--VIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEV 565
Query: 191 LGRGERVEVLAIPSTNQRTIF---QRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPS 247
GR V+ + Q T F R ++ E + + + Y S
Sbjct: 566 FGRTFPVQEYYLEDCIQMTQFIPPPRDKKKKDKDEEGGDDEETNCNLVCGDDYGPETRRS 625
Query: 248 MANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTY---YALEQQWHLMKPLSSF-F 303
M+ K +LI L+ +I ++ ++LVFLP + YA+++ + S +
Sbjct: 626 MSQLSEKETPLELIEALLKYIET--LNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHSY 683
Query: 304 KVHILHSSVD-TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDV 362
+ LHS + EQ + + KVIL+TNIAE+S+TI V YVIDSC+ +
Sbjct: 684 CILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTS 743
Query: 363 NRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQ 422
+ + + VW S++ EQR+GR GR G + L +K+ F LE H P I R L
Sbjct: 744 HNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEV 803
Query: 423 VLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKISPRGR 474
L I I L KA++PP + V +A L LD + +++P GR
Sbjct: 804 ALSIKLLRLGGIGH---FLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGR 855
>sp|B4K5R2|SPNE_DROMO Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
mojavensis GN=spn-E PE=3 SV=1
Length = 1431
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 269/575 (46%), Gaps = 67/575 (11%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRRF 79
+LP+ RE I+ + EN V ++ GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 116 NLPIYEQREDILAAIRENPVVILKGETGCGKTTQVPQYILDEAFKRREFCNIVVTQPRRI 175
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
A +++A V R + G Y +G H + E +++++ T GVLL+ + R +Y
Sbjct: 176 AAISIANRVCHERKWQPGTVCSYQVGLHRQSNLEDTRLLYCTTGVLLNNLV-RVKTLTQY 234
Query: 139 KVIILDEVHERSVESDLVLVCVKQLLLKKN-DLRVVLMSATADITKYRDYFRDLGRGERV 197
IILDEVHER + D +L+ V++LL + ++V+LMSAT D ++ YF
Sbjct: 235 THIILDEVHERDQDMDFLLLVVRRLLALNSRHVKVILMSATIDTREFSKYF-----AMSS 289
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEV 257
+ + + + F Y +Q+ + D P I PE
Sbjct: 290 SLPPVVTASHGRKFPLVKFYRDQLKNIHWKDE----------------PQRTTPGIGPEG 333
Query: 258 HKLIHDLVLHIHKNESDIEK-------------SILVFLPTYYALEQQW-HLMKPLS--- 300
+ L+L I E + ++L+FLP + ++ H+ + +
Sbjct: 334 YSDAIKLLLVIDNMERKADNQSQQSYEEAKRTGAVLIFLPGIHEIDTMAEHIGRIVDENP 393
Query: 301 ----SFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSL 356
S + H L S E+ + + HRKVIL TNI+ESS+T+P V+YVID C +
Sbjct: 394 NFKISIVRCHSLMSPDSQEEVFLPPPL--GHRKVILTTNISESSITVPDVSYVIDFCLTK 451
Query: 357 QVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAIL 415
+ D S L W S+ QR GR GR G+VYR+VTK F+ + + P +L
Sbjct: 452 VLHTDTASNFSSLRLEWASKVNCRQRAGRVGRLRSGRVYRMVTKDFYMNHMNEFGIPEML 511
Query: 416 RLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRY 475
R L+ VL A+ + +P +L A+ PP + + + LL AL + G Y
Sbjct: 512 RSPLQNSVL---KAKELEMGNPSEILALAMSPPNLSDIQNTVLLLKEVGALY-TTVDGVY 567
Query: 476 EP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFG-- 528
E +F+G++++ F L S L++ L E I++ M + L + G
Sbjct: 568 EELDGDLSFWGKIMSKFPLDVRLSRLIILGYVFNCLDEAIVIAAGMTVRSLYVTGSRGQM 627
Query: 529 DDALFAEYTGCYFGGDGNTRLLTGRKEMVIMGNLC 563
++A + Y + G G+ + R + + N+C
Sbjct: 628 NEAFWMHY--IFADGSGSDMIGIWRVYRIYL-NMC 659
>sp|B4HLH4|SPNE_DROSE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
sechellia GN=spn-E PE=3 SV=1
Length = 1434
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 159/548 (29%), Positives = 253/548 (46%), Gaps = 45/548 (8%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-----ILCTQPRRF 79
+L + + RE+I+ + + V +I GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 114 NLSIYAKREEILAAINAHPVIIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRRI 173
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
A +++A V + R + + +G H + E +++++ T GVLL+ + + Y
Sbjct: 174 AAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNK-TLTHY 232
Query: 139 KVIILDEVHERSVESDLVLVCVKQLLLKKN-DLRVVLMSATADITKYRDYFRDLGRGERV 197
I+LDEVHER D +L+ V++LL + ++++LMSAT D + DYF
Sbjct: 233 THIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFATTN----- 287
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQVTELL------GVDHGMTSELSSLRYCSGPSPSMANA 251
+ + +TN Y +Q+ ++ G H R + N
Sbjct: 288 SIPPVITTNHGRKHSIEKFYRDQLGSIIWNEEDVGDQHVPEINKHGYRAAVKIIVIIDNM 347
Query: 252 EIKPEVH-KLIHDLVLHIHKNESDIEKSILVFLPTYYALE---QQWHLMKPLSSFFKVHI 307
E K + +L +D L ++L+FLP Y ++ + M KV I
Sbjct: 348 ERKAAIQSRLSYDETLRY--------GAVLIFLPGIYEIDTMAENITCMLENDRNIKVLI 399
Query: 308 LHS---SVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNR 364
+ Q + RK+ILATNIAESS+T+P V+YVID C + D
Sbjct: 400 VRCFSLMTPENQRDVFNPPPPGFRKIILATNIAESSITVPDVSYVIDFCLTKVKVTDTAS 459
Query: 365 KIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFG-TLEDHECPAILRLSLRLQV 423
S L W S++ QR GR GR G+VYR+V K F+ + + P +LRL L+ V
Sbjct: 460 SFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMAEFGIPEMLRLPLQNSV 519
Query: 424 LLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEP-----T 478
L A+ + P +L AL PP + + + LL AL ++ G Y+ T
Sbjct: 520 LK---AKVLNMGSPMEILALALSPPNLSDIQNTILLLKEVGALY-LTVDGVYDALDGDLT 575
Query: 479 FYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTG 538
++G ++A L S L++ ML E I++ + T L H G L +
Sbjct: 576 YWGTIMARLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTNGL-FAHDGGRTQLGDSFWM 634
Query: 539 CYFGGDGN 546
Y DG+
Sbjct: 635 HYIFADGS 642
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 258/542 (47%), Gaps = 61/542 (11%)
Query: 1 MGPSSPTSSCSSSYSSPFTSPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVP 60
+ +S T+ + Y++ + LPV LR I+ + + +IVGETGCGKS+Q+P
Sbjct: 29 LAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIP 88
Query: 61 QFLLAENMEP----ILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE-RSK 115
Q+L + TQPRR A V VA VA+ R LG EVGY I + ++
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 148
Query: 116 IVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLM 175
I F T G+L+ EM L KY VI+LDE HER++ +D+ + +K++ K+ DLR+++
Sbjct: 149 IKFLTDGMLVREMMVDPL-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVA 207
Query: 176 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSEL 235
SAT D K+RD+F Q S + T ++ G T +
Sbjct: 208 SATLDADKFRDFFN----------------------QNETSDPARDTCVILTVGGRTFPV 245
Query: 236 SSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLP--------TYY 287
+ Y P P + + + V+ IH+ E D IL FL
Sbjct: 246 -DIFYLQSPVPDYIKSTV---------ETVVKIHQTEGD--GDILAFLTGQEEVETVVSM 293
Query: 288 ALEQQWHLMKP-LSSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPK 345
+EQ L + + +V +++ + + EQ + ++ +S RKVI+ATN+AE+S+TI
Sbjct: 294 LIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISG 353
Query: 346 VAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT 405
+ YVID ++ I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F
Sbjct: 354 IVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK 413
Query: 406 LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRA 465
L P + R +L +L + KA+ VL + PP + + AL+LL A
Sbjct: 414 LPQSTVPEMQRSNLAPVILQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL---YA 465
Query: 466 LQKISPRGRY-EPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPIL 524
L + R EP G +A F L+ + ++L+ G G +E + + +M Q + ++
Sbjct: 466 LGGLDKDCRLTEP--LGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVV 523
Query: 525 HP 526
P
Sbjct: 524 PP 525
>sp|B4LX81|SPNE_DROVI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila virilis
GN=spn-E PE=3 SV=1
Length = 1433
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 154/535 (28%), Positives = 250/535 (46%), Gaps = 70/535 (13%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME-----PILCTQPRRF 79
+LP+ + RE+I++ + EN V ++ GETGCGK++QVPQ++L E + I+ TQPRR
Sbjct: 116 NLPIYAQREQIMKAIRENPVVILKGETGCGKTTQVPQYILDEACKRREFCNIVVTQPRRI 175
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
A +++A V + R + G Y +G H + E +++++ T GVLL+ + R Y
Sbjct: 176 AAISIANRVCQERQWQPGTVCSYQVGLHRQSNVEDTRLLYCTTGVLLNNL-IRLKTLTHY 234
Query: 139 KVIILDEVHERSVESDLVLVCVKQLL-LKKNDLRVVLMSATADITKYRDYFRDLGRGERV 197
I+LDEVHER + D +L+ V++LL L ++V+LMSAT D ++ Y
Sbjct: 235 THIVLDEVHERDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFSKY---------- 284
Query: 198 EVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTS----ELSSLRYCSGPSPSMANAEI 253
F ++ VT G + + +L ++ + P I
Sbjct: 285 -------------FATSSAFPPVVTASHGRKYPLVKYYRDQLKNIHWKDEPQERAPG--I 329
Query: 254 KPEVHKLIHDLVLHIHK-------------NESDIEKSILVFLPTYYALEQQW-HLMKPL 299
PE + ++L I E+ S+L+FLP ++ H+ +
Sbjct: 330 GPEGYADAIKILLVIDNMERKAVGQSLQSYEEAKRTGSVLIFLPGINEIDTMADHITSVM 389
Query: 300 S-------SFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDS 352
+ + H L S E+ HRK+IL TNIAESS+T+P V+YVID
Sbjct: 390 EENPTMIITIVRCHSLMSPDSQEEVFQP--PLPGHRKIILTTNIAESSITVPDVSYVIDF 447
Query: 353 CRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHEC 411
C + + D L W S+ QR GR GR G+VYR+V+K+F+ +++
Sbjct: 448 CLTKVLHTDTATNYSCLRLEWASKVNCRQRAGRVGRLRSGRVYRMVSKAFYLEEMKEFGI 507
Query: 412 PAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISP 471
P +LR L+ VL A+ + P +L A+ PP + + + LL AL +
Sbjct: 508 PEMLRSPLQNSVL---KAKELEMGRPSEILALAMSPPNLSDIQNTVLLLKEVGALY-TTV 563
Query: 472 RGRYEP-----TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPL 521
G YE T++G +++ F L S L++ L E I++ M + L
Sbjct: 564 DGVYEELDGDLTYWGTIMSRFPLDVRLSRLIILGYVFNCLEEVIVIAAGMTVRSL 618
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 251/507 (49%), Gaps = 77/507 (15%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME---PILCTQPRRFAV 81
SLP+ L++++++ V +N+V +++GETG GK++QV Q+L I CTQPRR A
Sbjct: 514 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAA 573
Query: 82 VAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
++VAK VA+ C LG EVGY I + I + T G+LL E + D L+ +Y V
Sbjct: 574 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS--QYSV 631
Query: 141 IILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEVL 200
I+LDE HER++ +D++ +K+L+ ++ DLR+++ SAT D K+ YF + +
Sbjct: 632 IMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFN------CNIF 685
Query: 201 AIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKL 260
IP RT E+L Y P +A L
Sbjct: 686 TIPG---RTF----------PVEIL--------------YTKQPETDYLDA-------AL 711
Query: 261 IHDLVLHIHKNESDIEKSILVFLPTYYALEQQ----WHLMKPLSSFFKVHIL---HSSVD 313
I L +H+ + E D ILVFL ++ + MK L I+ +S++
Sbjct: 712 ITVLQIHLTEPEGD----ILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALP 767
Query: 314 TE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
+E Q+ + RKV++ATNIAE+S+TI + YV+D + Q ++ + ++S +
Sbjct: 768 SEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVIT 827
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAES 431
+SQ+ A+QR GR GRT G+ YRL T+S + + P I R++L + L +
Sbjct: 828 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTM----- 882
Query: 432 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQK---ISPRGR------YEPTFYGR 482
KA+ +L +DPP P+ + A++ L AL + ++ GR EP
Sbjct: 883 KAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKM 942
Query: 483 LLASFSLSFDASVLVLKFGEIGMLREG 509
LLAS L +L + I M++ G
Sbjct: 943 LLASVDLGCSDEILTM----IAMIQTG 965
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 258/542 (47%), Gaps = 61/542 (11%)
Query: 1 MGPSSPTSSCSSSYSSPFTSPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVP 60
+ +S T+ + Y++ + LPV LR I+ + + +IVGETGCGKS+Q+P
Sbjct: 29 LAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIP 88
Query: 61 QFLLAENMEP----ILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE-RSK 115
Q+L + TQPRR A V VA VA+ R LG EVGY I + ++
Sbjct: 89 QYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 148
Query: 116 IVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLM 175
I F T G+L+ EM L KY VI+LDE HER++ +D+ + +K++ K+ DLR+++
Sbjct: 149 IKFLTDGMLVREMMVDPL-LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVA 207
Query: 176 SATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSEL 235
SAT D K+RD+F Q S + T ++ G T +
Sbjct: 208 SATLDADKFRDFFN----------------------QNETSDPARDTCVILTVEGRTFPV 245
Query: 236 SSLRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLP--------TYY 287
+ Y P P + + + V+ IH+ E D +L FL
Sbjct: 246 -DIFYLQSPVPDYIKSTV---------ETVVKIHQTEGD--GDVLAFLTGQEEVETVVSM 293
Query: 288 ALEQQWHLMKP-LSSFFKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPK 345
+EQ L + + +V +++ + + EQ + ++ +S RKVI+ATN+AE+S+TI
Sbjct: 294 LIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISG 353
Query: 346 VAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT 405
+ YVID ++ I+ +V VSQ+ A QR GR GR+ G+ YRL T+ F
Sbjct: 354 IVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK 413
Query: 406 LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRA 465
L P + R +L +L + KA+ VL + PP + + AL+LL A
Sbjct: 414 LPQSTVPEMQRSNLAPVILQL-----KALGIDNVLRFHFMSPPPAQSMVQALELL---YA 465
Query: 466 LQKISPRGRY-EPTFYGRLLASFSLSFDASVLVLKFGEIGMLREGILLGILMDTQPLPIL 524
L + R EP G +A F L+ + ++L+ G G +E + + +M Q + ++
Sbjct: 466 LGGLDKDCRLTEP--LGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVV 523
Query: 525 HP 526
P
Sbjct: 524 PP 525
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 239/476 (50%), Gaps = 67/476 (14%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL----LAENMEPILCTQPRRFA 80
SLPV + R+ +E V E++V +I GETG GK++Q+PQ+L E + I CTQPRR A
Sbjct: 363 SLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVA 422
Query: 81 VVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKV 140
++VA VA C+LG +VGY I SE++ + + T G+LL E + + Y V
Sbjct: 423 AMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP-DLASYSV 481
Query: 141 IILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEVL 200
+++DE HER++ +D++ VK + + DL++++ SAT D K+ +F D +
Sbjct: 482 MMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDD------APIF 535
Query: 201 AIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKL 260
IP RR VD + Y P +A I
Sbjct: 536 RIPG--------RR----------FPVD---------IYYTQAPEADYVDAAIV------ 562
Query: 261 IHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLM---KPLSSFFKVHI---LHSSVD 313
++ IH + + ILVFL +E Q LM K L S K I +++++
Sbjct: 563 ---TIMQIHLTQP-LPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLP 618
Query: 314 TE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
++ QA + K RKV+LATNIAE+SVTI + YVID S Q +D ++ +V
Sbjct: 619 SDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVV 678
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAILRLSLRLQVLLICCAES 431
+S++ A QR GR GRT G+ +RL T ++ LE+ P I R +L VL++ +S
Sbjct: 679 TISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLML---KS 735
Query: 432 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASF 487
I D ++ LDPP E + AL+ L AL ++ RG E T GR +A F
Sbjct: 736 LGIHD--LVHFDFLDPPPQETLVIALEQL---YALGALNHRG--ELTKLGRRMAEF 784
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 164/535 (30%), Positives = 256/535 (47%), Gaps = 70/535 (13%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENME---PILCTQPRRFAV 81
SLP+ LRE ++ V E+++ +++GETG GK++Q+ Q+L I CTQPRR A
Sbjct: 507 SLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAA 566
Query: 82 VAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
++V+K VA+ C+LG EVGY I S + I F T G+LL E + D L+A Y V
Sbjct: 567 MSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSA--YSV 624
Query: 141 IILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEVL 200
IILDE HER++ +D++ +KQ L ++ +L+V++ SAT + K+ YF + ++
Sbjct: 625 IILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN------AQLF 678
Query: 201 AIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKL 260
IP RT VD +RY P +A L
Sbjct: 679 IIPG---RT---------------FPVD---------IRYTKDPEADYLDA-------SL 704
Query: 261 IHDLVLHIHKNESDIEKSILVFLPTYYALEQQ----WHLMKPLSSFFKVHILHSSVDTEQ 316
I + +H+ + D IL+FL ++ + MK L S I+
Sbjct: 705 ITVMQIHLSEPPGD----ILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALP 760
Query: 317 ALMAMKICK----SHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV 372
+ M KI + RKV++ATNIAE+S+TI + YVID S Q ++ +DS +
Sbjct: 761 SEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVA 820
Query: 373 WVSQSQAEQRRGRTGRTCDGQVYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAES 431
+SQ+ A QR GR GRT G+ YRL T+S F + P I R +L VL +
Sbjct: 821 PISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTM----- 875
Query: 432 KAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSF 491
KA+ +L +DPP + + A++ L +L + G T GR +A F L
Sbjct: 876 KAMGINDLLNFDFMDPPPVQTLVSAMEQL---YSLGALDEEGLL--TRLGRKMAEFPLDP 930
Query: 492 DASVLVLKFGEIGMLREGILLGILMDTQPLPILHPFGDDALFAEYTGCYFGGDGN 546
S +++ ++G E + + ++ Q + P AL + +F +G+
Sbjct: 931 QLSKMLIASVDLGCSDEILTVVAMLSVQNV-FYRPKEKQALADQKKAKFFQPEGD 984
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 248/505 (49%), Gaps = 76/505 (15%)
Query: 24 SSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP------------I 71
S LPV +EK +E + N+ +VGETG GK++Q+PQ+ + E M+ +
Sbjct: 74 SQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAV-EFMKQQQQGQPPGQARLV 132
Query: 72 LCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDR 131
CTQPRR A ++VA VA+ + LG EVGY I +SER+ + + T G+LL E +
Sbjct: 133 ACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNS 192
Query: 132 GLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDL 191
L KYKV+ILDE HER++ +D+++ +K+++ + D++VV+MSAT D K++ YF D
Sbjct: 193 PL-LDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDC 251
Query: 192 ------GRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSS--LRYCSG 243
GR VE+ P+ + YLE + H M E+ L + +G
Sbjct: 252 PLLSVPGRTFPVEIFFTPNAEK--------DYLEAAIRTVIQIH-MVEEVEGDILLFLTG 302
Query: 244 PSP-SMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL--EQQWHLMKPLS 300
A I E+ L D L +P Y L Q + +P
Sbjct: 303 QEEIEEACKRIDREIQALGAD-------------AGALSCIPLYSTLPPAAQQRIFEP-- 347
Query: 301 SFFKVHILHSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFW 360
+ + ++ K S TNIAE+S+TI V +VID S Q +
Sbjct: 348 ---------APPNRPNGAISRKCVIS-------TNIAETSLTIDGVVFVIDPGFSKQKVY 391
Query: 361 DVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAILRLSL 419
+ +++S + +S++ A QR GR GRT G+ +RL T++ +G+ ++D P ILR +L
Sbjct: 392 NPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNL 451
Query: 420 RLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTF 479
VL + K + ++ +DPP PE + AL+LL++ LQ I+ G E T
Sbjct: 452 GSVVLQL-----KKLGTEDLVHFDFMDPPAPETLMRALELLNY---LQAINDDG--ELTE 501
Query: 480 YGRLLASFSLSFDASVLVLKFGEIG 504
G L+A F L + +++ E+
Sbjct: 502 LGSLMAEFPLDPQLAKMLITSTELN 526
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 266/538 (49%), Gaps = 83/538 (15%)
Query: 20 SPEFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAE---NMEPILCTQP 76
S + +LPV ++R ++++ V +N+ +IVGETG GK++Q+ Q+L E N I CTQP
Sbjct: 477 SAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQP 536
Query: 77 RRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNA 135
RR A V+VAK VA+ C++G +VGY I ++I + T G+L E + D ++
Sbjct: 537 RRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS- 595
Query: 136 LKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGE 195
KY VI+LDE HER+V +D++ +K+ +K+ +L+V++ SAT + K+ +YF +
Sbjct: 596 -KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLN----- 649
Query: 196 RVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKP 255
++ IP G T + L Y P A +
Sbjct: 650 -CPIINIP--------------------------GKTFPVEVL-YSQTPQMDYIEAAL-- 679
Query: 256 EVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL----EQQWHLMKPLS-SFFKVHIL-- 308
D V+ IH NE ILVFL + E + +K L S ++ IL
Sbjct: 680 -------DCVIDIHINEG--PGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPV 730
Query: 309 HSSVDTE-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKID 367
+S++ +E Q+ + K RKV+ ATNIAE+S+TI + YV+D + ++ I+
Sbjct: 731 YSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIE 790
Query: 368 SAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKS-FFGTLEDHECPAILRLSLRLQVLLI 426
+ +SQ+QA QR+GR GRT G+ YRL T+S F+ + ++ P I R +L +L++
Sbjct: 791 QLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILML 850
Query: 427 CCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQ---KISPRGR------YEP 477
KA+ +L +DPP ++ +AL L H ++L K++ G+ +P
Sbjct: 851 -----KAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDP 905
Query: 478 TFYGRLLASFSLSFDASVLVLKFGEIGMLREGILL------GILMDTQPLPILHPFGD 529
T LL+S ++ + I ML + + D++ HP+GD
Sbjct: 906 TLSRSLLSSVDNQCSDEIVTI----ISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGD 959
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 223/450 (49%), Gaps = 67/450 (14%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP------ILCTQPRR 78
+LP+ + + +++ +NRV ++VGETG GKS+Q+PQFL N P + TQPRR
Sbjct: 95 NLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFL---NECPYAQEGCVAITQPRR 151
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKY 138
A V +AK VA + C LG +VGY I S++++I + T G+LL E+ + + + +Y
Sbjct: 152 VAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILS-QY 210
Query: 139 KVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVE 198
+ILDE HER++ +D++L VK+++ K+ LRV++MSAT + ++ ++F + E
Sbjct: 211 HTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFF------DGAE 264
Query: 199 VLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVH 258
+ I S Q + + Y P P +A ++
Sbjct: 265 ICYI-SGRQYPV--------------------------QIHYTYTPEPDYLDACLRTIFQ 297
Query: 259 KLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSS 311
LH D ILVFL +E L+K S ++ L +S
Sbjct: 298 -------LHTKLPPGD----ILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFAS 346
Query: 312 VDTEQALMA-MKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAE 370
+ EQ L + +HRKV+L+TNIAE+SVTI + YVID+ + ++ ++S
Sbjct: 347 LPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLT 406
Query: 371 LVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAE 430
+ +SQS A QR GR GR GQ YR+ T++ F L P I R+ L VL +
Sbjct: 407 VQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTL---- 462
Query: 431 SKAISDPKVLLQKALDPPYPEVVGDALDLL 460
KA V+ +DPP E + AL+ L
Sbjct: 463 -KARGQNDVINFHYMDPPSKEGLLRALEHL 491
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 244/486 (50%), Gaps = 67/486 (13%)
Query: 25 SLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP---ILCTQPRRFAV 81
SLPV RE++++ V E +V +IVGETG GK++Q+PQ+L I CTQPRR A
Sbjct: 466 SLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAA 525
Query: 82 VAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDEMRDRGLNALKYKVI 141
++VA VA+ C+LG EVGY I S+++ + + T G+L+ E + Y V+
Sbjct: 526 MSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFL-TAPDLASYSVL 584
Query: 142 ILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLGRGERVEVLA 201
I+DE HER++ +D++ +K + + DL++++ SAT D ++ DYF
Sbjct: 585 IIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFD-----------G 633
Query: 202 IPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIKPEVHKLI 261
P+ N + G + +T+ Y P +A + +
Sbjct: 634 APTFN-----------------IPGRKYEVTT-----HYTQAPEADYLDAAV-------V 664
Query: 262 HDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHI-------LHSSVDT 314
L +HI + D ILVFL ++Q +++ + I ++S++ T
Sbjct: 665 TVLQIHITEPLGD----ILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPT 720
Query: 315 E-QALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVW 373
+ QA + + RKV+LATNIAE+S+TI + YVID Q ++ ++S +
Sbjct: 721 DLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITP 780
Query: 374 VSQSQAEQRRGRTGRTCDGQVYRLVTK-SFFGTLEDHECPAILRLSLRLQVLLICCAESK 432
VS++ A QR+GR GR G+ +RL T +F LE++ P I R +L VLL+ +S
Sbjct: 781 VSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLL---KSM 837
Query: 433 AISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFD 492
I+D ++ +DPP + + AL+ L AL ++ RG+ T GR +A F +
Sbjct: 838 GIND--LMNFDFMDPPPAQTLIAALEQL---YALGALNDRGQL--TKLGRKMAEFPVDPQ 890
Query: 493 ASVLVL 498
S +++
Sbjct: 891 LSKMII 896
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 179 bits (454), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 243/491 (49%), Gaps = 50/491 (10%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRR 78
LP +++++V + ++VT+I GETGCGK++QV QF+L +E I+CTQPRR
Sbjct: 200 LPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRR 259
Query: 79 FAVVAVAKMVAKGR--NCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMR-DRGLN 134
+ ++VA+ VA R +C G GY I S+ ++ I++ T G++L ++ D L+
Sbjct: 260 ISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLS 319
Query: 135 ALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRD---- 190
++ + I+LDE+HER+++SD+++ +K LL ++DL+V+LMSAT + K+ +YF +
Sbjct: 320 SVSH--IVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMI 377
Query: 191 ------------LGRGERVEVLAIP------STNQRTIFQRRVSYLEQVTELLGVDHGMT 232
L ++ +P S +R Q V+ E+ +
Sbjct: 378 HIPGFTFPVVEYLLEDIIEKIRYVPDQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWP 437
Query: 233 SELSSL--RYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALE 290
+ + L RY + + + LI L+ +I E D +ILVFLP + +
Sbjct: 438 AYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEED--GAILVFLPGWDNIS 495
Query: 291 QQWHLMKPLSSF----FKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPK 345
L+ F F + LHS + T Q + K RK+++ATNIAE+S+TI
Sbjct: 496 TLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDD 555
Query: 346 VAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT 405
V YVID + + +D I + WVS++ A+QR+GR GR G Y L
Sbjct: 556 VVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL 615
Query: 406 LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRA 465
L+D++ P ILR L L I I+ L + +DPP E V ++ L A
Sbjct: 616 LDDYQLPEILRTPLEELCLQIKILRLGGIA---YFLSRLMDPPSNEAVVLSIKHLMELSA 672
Query: 466 LQK---ISPRG 473
L K ++P G
Sbjct: 673 LDKQEELTPLG 683
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 229/461 (49%), Gaps = 81/461 (17%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM----EPILCTQPRRFAV 81
LPV +E ++ + EN+V ++VGETG GK++Q+PQF++ + + + TQPRR A
Sbjct: 77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAA 136
Query: 82 VAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
++VAK V++ + ELG EVGY I + S R+ + + T G+LL E M D LN KY V
Sbjct: 137 ISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLN--KYDV 194
Query: 141 IILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDL------GRG 194
IILDE HER++ +D++ +K +L ++ DL++++MSAT + K++ YF + GR
Sbjct: 195 IILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRL 254
Query: 195 ERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEIK 254
VE+ + YLE S++R
Sbjct: 255 HPVEIFYTEEAAK--------DYLE----------------SAVR--------------- 275
Query: 255 PEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-----QWHLMKPLSSFFKVHILH 309
V+ IH NE ILVFL +E Q + K L+
Sbjct: 276 ---------TVIDIHTNEGT--GDILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLY 324
Query: 310 SSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSA 369
SS+ Q CK RK I++TNIAE+S+TI + +V+D S Q ++ +++S
Sbjct: 325 SSLPIYQQSKIFDTCK-ERKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESL 383
Query: 370 ELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHEC-PAILR---LSLRLQVLL 425
+ +S++ A QR GR GRT G+ +RL T+ F L + P ILR S+ LQ+L
Sbjct: 384 LVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLK 443
Query: 426 ICCAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRAL 466
+ + ++ +DPP P+ + AL++L + AL
Sbjct: 444 LGVVD--------LVHFDFMDPPVPDTLIRALEVLHYLGAL 476
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 240/479 (50%), Gaps = 55/479 (11%)
Query: 8 SSCSSSYSSPFTSPEFSS-------LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVP 60
S Y+ S E+ S LP ++ I++ + +N V LI GETG GKS+QV
Sbjct: 579 SVLREEYTKRIKSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVV 638
Query: 61 QFLL----AENME----PILCTQPRRFAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE 112
QF+L E + I+CTQPRR + + +A+ V+ R G EVGY I
Sbjct: 639 QFILDFLQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKA 698
Query: 113 RSKIVFKTAGVLLDEMRDRGLNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRV 172
++I F T GVL+ +++ L+ ++++DEVHERS+++DL++ +K LL + +++
Sbjct: 699 STRIKFMTTGVLVRLLQN-ARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKI 757
Query: 173 VLMSATADITKYRDYFRDLGRGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMT 232
VLMSAT ++ ++ +F L +E P T+ +LE + L +D +
Sbjct: 758 VLMSATVNVDLFKKFFPGLATCH-IEGRTFPITDY---------FLEDI--LSDLDFKIK 805
Query: 233 SELSSLRYCSGPSPSMANAE--IKPEV-----------HKLIHDLVLHIHK--NESDIEK 277
E +L Y N + +KP + L+ +V ++HK ++
Sbjct: 806 RE-KALSYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNG 864
Query: 278 SILVFLPTYYALEQQWHLM--KPLSSFFKVHILHSSVDTEQALMAMKICKSHRKVILATN 335
SI+VFLP + + +L+ K + F V LHS++ E K RKV+++TN
Sbjct: 865 SIIVFLPGVGEINKCCNLLANKSNEADFMVLPLHSALTPEDQKRVFKKYHGKRKVVVSTN 924
Query: 336 IAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELV--WVSQSQAEQRRGRTGRTCDGQ 393
IAE+S+TI ID+ R+ +F+ N K ++ +L+ ++S+++ +QRRGR GR +G
Sbjct: 925 IAETSITIDDCVATIDTGRAKSMFY--NPKDNTTKLIESFISKAEVKQRRGRAGRVREGL 982
Query: 394 VYRLVTKSFF-GTLEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALD-PPYP 450
Y+L +K+ + + P I R+ L L ++ I D K L ALD PP P
Sbjct: 983 SYKLFSKNLYENDMISMPIPEIKRIPLE---SLYLSVKAMGIKDVKAFLSTALDAPPLP 1038
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 145/468 (30%), Positives = 232/468 (49%), Gaps = 47/468 (10%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRR 78
LP +++++V + ++VT+I GETGCGK++QV QF+L +E I+CTQPRR
Sbjct: 207 LPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRR 266
Query: 79 FAVVAVAKMVAKGR--NCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMR-DRGLN 134
+ ++VA+ VA R +C G GY I S+ ++ I++ T G++L ++ D L+
Sbjct: 267 ISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLS 326
Query: 135 ALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRD---- 190
++ + I+LDE+HER+++SD+++ VK LL ++DL+V+LMSAT + K+ +YF +
Sbjct: 327 SVSH--IVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMI 384
Query: 191 ------------LGRGERVEVLAIP------STNQRTIFQRRVSYLEQVTELLGVDHGMT 232
L ++ +P S +R Q V+ E+ +
Sbjct: 385 HIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWP 444
Query: 233 SELSSL--RYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALE 290
+ L RY + + E LI L+ +I E D +ILVFLP + +
Sbjct: 445 DYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEED--GAILVFLPGWDNIS 502
Query: 291 QQWHLMKPLSSF----FKVHILHSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPK 345
L+ F F + LHS + T Q + + RK+++ATNIAE+S+TI
Sbjct: 503 TLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDD 562
Query: 346 VAYVIDSCRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT 405
V YVID + + +D I + WVS++ A+QR+GR GR G Y L
Sbjct: 563 VVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASL 622
Query: 406 LEDHECPAILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVV 453
L+D++ P ILR L L I I+ L + +DPP E V
Sbjct: 623 LDDYQLPEILRTPLEELCLQIKILRLGGIA---YFLSRLMDPPSNEAV 667
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 176 bits (447), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 242/501 (48%), Gaps = 62/501 (12%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCTQPRR 78
LPV +I+E + N V +I G TGCGK++QVPQ++L + ++ I+ TQPRR
Sbjct: 390 LPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRR 449
Query: 79 FAVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSE-RSKIVFKTAGVLLDEMRDRGLNALK 137
+ VAVA+ VA R E G GY + L + I+F T GVLL ++ + G+ +
Sbjct: 450 ISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-EAGIRGIS 508
Query: 138 YKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRD------L 191
+ +I+DE+HER + +D +LV ++ ++L ++R+VLMSAT D T + +YF +
Sbjct: 509 H--VIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVY 566
Query: 192 GRGERVEVLAIPSTNQRTIF--------------QRRVSYLEQVTELLGVDHGMTSELSS 237
GR V+ + Q T F + G ++G ++L
Sbjct: 567 GRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKEDDGGEDDDANCNLICGDEYGPETKL-- 624
Query: 238 LRYCSGPSPSMANAEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMK 297
SM+ K +LI L+ +I ++ ++LVFLP + + ++
Sbjct: 625 ---------SMSQLNEKETPFELIEALLKYIET--LNVPGAVLVFLPGWNLIYTMQKHLE 673
Query: 298 PLSSF----FKVHILHSSVDTEQALMAMK-ICKSHRKVILATNIAESSVTIPKVAYVIDS 352
S F +++ LHS + E+ + KVIL+TNIAE+S+TI V YVIDS
Sbjct: 674 NNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDS 733
Query: 353 CRSLQVFWDVNRKIDSAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECP 412
C+ + + + + VW S++ EQR+GR GR G + L +++ F LE H P
Sbjct: 734 CKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTP 793
Query: 413 AILRLSLRLQVLLICCAESKAISDPKVLLQKALDPPYPEVVGDA---LDLLDHKRALQKI 469
+ R L L I I L KA++PP + + +A L LD A ++
Sbjct: 794 EMFRTPLHEIALSIKLLRLGGIGQ---FLAKAIEPPPLDAIIEAEHTLRELDALDANDEL 850
Query: 470 SPRGR------YEPTFYGRLL 484
+P GR EP F G+++
Sbjct: 851 TPLGRILAKLPIEPRF-GKMM 870
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 237/473 (50%), Gaps = 52/473 (10%)
Query: 22 EFSSLPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENMEP-------ILCT 74
E LPV ++ I+ + +N V +I G+TGCGK++++PQ LL + ++ T
Sbjct: 474 ESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVIT 533
Query: 75 QPRRFAVVAVAKMVAKGRNCELGGEVGYHIG-HSKHLSERSKIVFKTAGVLLDEMR-DRG 132
QPRR + ++VA+ VA+ + VGY + SK + ++F T G+LL +++ +
Sbjct: 534 QPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPS 593
Query: 133 LNALKYKVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDLG 192
L + + +++DEVHER V +D +L+ +K + DLR+VLMSAT D ++ YF
Sbjct: 594 LEGVSH--VVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGG-- 649
Query: 193 RGERVEVLAIPSTNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAE 252
V+ +P ++ + YLE++ LG E+ ++ E
Sbjct: 650 ----CPVVKVPGF----MYPVKEYYLEEILAKLGRHRHRHYEIKQ-----------SDDE 690
Query: 253 IKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQ-QWHLMKPL---SSFFKVHIL 308
++ LI DLVL I + IL FLP + ++ Q L++ L +S + V +
Sbjct: 691 CVLDL-DLITDLVLQIDAHGE--PGGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPV 747
Query: 309 HSSVDT-EQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKID 367
HS++ +Q + + RK++LATNIAE+S+TI + +V+DS + +D+ K+
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 368 SAELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLL-- 425
E VWVS+S QRRGR GR G Y L +S + ++ P ILR L V+
Sbjct: 808 CLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAK 867
Query: 426 ICCAESKAISDPKVLLQKALDPPYPEVVGDA------LDLLDHKRALQKISPR 472
I E A+ L KALD P + V +A + +LD + AL + R
Sbjct: 868 IHMPEKTAVE----FLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKR 916
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 153/503 (30%), Positives = 238/503 (47%), Gaps = 65/503 (12%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFLLAENM---EPILCTQPRRFAVV 82
LP+ + R +I++K+ ++ +++GETG GKS+Q+ QFL + E I+CTQPR+ A +
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 83 AVAKMV-AKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKYKV 140
+ V + C V S SK+V+ T LL M+DR L+ +
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGIS--C 420
Query: 141 IILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDL------GRG 194
+I+DE HERS+ +DL+L +++LL ++ DLR+V+MSATAD + Y D GR
Sbjct: 421 VIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRN 480
Query: 195 ERVEVLAIPS-TNQRTIFQRRVSYLEQVTELLGVDHGMTSELSSLRYCSGPSPSMANAEI 253
VE++ PS T + ++ R SY V +
Sbjct: 481 FPVEIVYSPSGTEENSVVGRIASYAGDVVK------------------------------ 510
Query: 254 KPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYALEQQWHLMKPLSSFFKVHILHSSVD 313
+ + IHK E E +IL FL + +E W + ++ LH +
Sbjct: 511 ----------MAVEIHKTEK--EGTILAFLTSQAEVE--WACERFVAPSAIALPLHGKLS 556
Query: 314 TEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDSAELVW 373
E+ M + RKVI ATNIAE+S+TIP V YVIDS + ++ + ++
Sbjct: 557 FEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQ 616
Query: 374 VSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGTLEDHECPAILRLSLRLQVLLICCAESKA 433
VSQS A QR GR GRT G+ YRL +K+ F ++ ++ P I R+ L + +L + A
Sbjct: 617 VSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRML-----A 671
Query: 434 ISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASFSLSFDA 493
+ + + +D P PE + A+ L A+ + G E T G L L
Sbjct: 672 LGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAV--VEKNGVLELTQEGHCLVKLGLEPKL 729
Query: 494 SVLVLKFGEIGMLREGILLGILM 516
L+L M +EGI+L +M
Sbjct: 730 GKLILGCFRHRMGKEGIVLAAVM 752
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 247/491 (50%), Gaps = 69/491 (14%)
Query: 26 LPVMSLREKIVEKVLENRVTLIVGETGCGKSSQVPQFL------LAENMEPILCTQPRRF 79
LPV +++ + ++ ++ ++VGETG GK++Q+PQ+ L + CTQPRR
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 80 AVVAVAKMVAKGRNCELGGEVGYHIGHSKHLSERSKIVFKTAGVLLDE-MRDRGLNALKY 138
A ++VA+ VA + LG EVGY I S ++ + + T G+LL E M D L +Y
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE--RY 254
Query: 139 KVIILDEVHERSVESDLVLVCVKQLLLKKNDLRVVLMSATADITKYRDYFRDL------G 192
VIILDE HER++ +D+++ +K+++ +++DL+V++MSAT D K++ YF + G
Sbjct: 255 GVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPG 314
Query: 193 RGERVEVLAIPSTNQRTIFQRRVSYLE-QVTELLGVDHGMTSELSSLRYCSGPSP-SMAN 250
R VE+ P + YLE + ++ + E L + +G A
Sbjct: 315 RTHPVEIFYTPEPER--------DYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEAC 366
Query: 251 AEIKPEVHKLIHDLVLHIHKNESDIEKSILVFLPTYYAL--EQQWHLMKPLSSFFKVHIL 308
IK EV L ++ DI+ +P Y L +QQ + +P
Sbjct: 367 KRIKREVDDLGPEV--------GDIK-----IIPLYSTLPPQQQQRIFEP---------- 403
Query: 309 HSSVDTEQALMAMKICKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDVNRKIDS 368
+ + RKV+++TNIAE+S+TI V +VID + Q ++ +++S
Sbjct: 404 -PPPKKQNGAIG-------RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES 455
Query: 369 AELVWVSQSQAEQRRGRTGRTCDGQVYRLVTKSFFGT-LEDHECPAILRLSLRLQVLLIC 427
+ +S++ A+QR GR GRT G+ +RL T+ + T ++D+ P ILR +L VL +
Sbjct: 456 LLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL- 514
Query: 428 CAESKAISDPKVLLQKALDPPYPEVVGDALDLLDHKRALQKISPRGRYEPTFYGRLLASF 487
K + ++ +DPP PE + AL+LL++ AL + T G ++A F
Sbjct: 515 ----KKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDG-----DLTELGSMMAEF 565
Query: 488 SLSFDASVLVL 498
L + +V+
Sbjct: 566 PLDPQLAKMVI 576
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 349,798,148
Number of Sequences: 539616
Number of extensions: 14867172
Number of successful extensions: 38726
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 37719
Number of HSP's gapped (non-prelim): 715
length of query: 957
length of database: 191,569,459
effective HSP length: 127
effective length of query: 830
effective length of database: 123,038,227
effective search space: 102121728410
effective search space used: 102121728410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)