Query 002166
Match_columns 957
No_of_seqs 380 out of 843
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 15:10:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002166.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002166hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qu6_A Protein kinase PKR; dsR 100.0 1.3E-31 4.4E-36 267.5 15.0 161 703-909 11-173 (179)
2 3ef0_A RNA polymerase II subun 100.0 9.7E-30 3.3E-34 280.3 14.8 200 132-407 8-262 (372)
3 3ef1_A RNA polymerase II subun 100.0 1.1E-29 3.8E-34 284.9 14.2 163 133-371 17-182 (442)
4 2l3j_A Double-stranded RNA-spe 99.9 3.2E-25 1.1E-29 230.7 24.5 197 705-910 4-227 (236)
5 2yt4_A Protein DGCR8; DSRBD, R 99.9 1.7E-26 5.9E-31 240.0 15.0 176 703-908 20-198 (232)
6 3qle_A TIM50P; chaperone, mito 99.7 6.7E-18 2.3E-22 172.9 12.3 113 258-394 56-174 (204)
7 3adj_A F21M12.9 protein; HYL1, 99.7 3E-17 1E-21 143.7 8.6 69 704-772 3-74 (76)
8 2dix_A Interferon-inducible do 99.7 6.8E-17 2.3E-21 144.3 10.6 71 701-772 4-76 (84)
9 1x49_A Interferon-induced, dou 99.7 3.6E-17 1.2E-21 150.0 8.9 71 703-773 12-84 (97)
10 2ght_A Carboxy-terminal domain 99.7 1.3E-16 4.5E-21 158.7 10.8 115 256-394 50-170 (181)
11 3adg_A F21M12.9 protein; HYL1, 99.7 1.3E-16 4.3E-21 138.4 9.2 67 705-771 3-72 (73)
12 3llh_A RISC-loading complex su 99.7 1.7E-16 5.9E-21 143.3 10.1 69 703-772 12-82 (90)
13 1di2_A XLRBPA, double stranded 99.7 1.5E-16 5.2E-21 136.4 9.2 65 706-771 1-68 (69)
14 2cpn_A TAR RNA-binding protein 99.7 4E-16 1.4E-20 141.0 11.3 74 698-772 9-85 (89)
15 3adl_A RISC-loading complex su 99.7 4.2E-16 1.4E-20 140.7 10.9 68 704-772 14-84 (88)
16 1x48_A Interferon-induced, dou 99.7 3.7E-16 1.3E-20 140.9 10.4 70 704-773 5-75 (88)
17 1t4n_A Ribonuclease III; DSRBD 99.6 1.2E-16 4.3E-21 146.3 6.5 67 705-771 6-74 (94)
18 1uhz_A Staufen (RNA binding pr 99.6 5.5E-16 1.9E-20 140.1 10.6 68 704-772 5-75 (89)
19 1ekz_A DSRBDIII, maternal effe 99.6 1E-16 3.5E-21 140.0 5.2 68 703-771 5-74 (76)
20 2hhl_A CTD small phosphatase-l 99.6 3.8E-16 1.3E-20 157.8 9.9 116 256-395 63-184 (195)
21 2khx_A Ribonuclease 3; drosha, 99.6 1.6E-16 5.4E-21 142.5 6.4 69 705-773 1-77 (85)
22 1x47_A DGCR8 protein; structur 99.6 1.1E-15 3.8E-20 140.3 11.9 71 703-773 14-85 (98)
23 2l2n_A Hyponastic leave 1; DSR 99.6 6.7E-16 2.3E-20 143.0 9.7 74 700-773 12-88 (103)
24 1whq_A RNA helicase A; double- 99.6 1E-15 3.5E-20 140.9 9.5 71 704-774 5-77 (99)
25 2b7t_A Double-stranded RNA-spe 99.6 1.2E-15 4.2E-20 132.4 9.3 66 705-772 4-71 (73)
26 3adj_A F21M12.9 protein; HYL1, 99.6 7.9E-16 2.7E-20 134.7 6.8 72 836-908 3-74 (76)
27 1t4o_A Ribonuclease III; RNT1P 99.6 9.7E-16 3.3E-20 145.2 7.5 71 705-775 8-82 (117)
28 2cpn_A TAR RNA-binding protein 99.6 2.4E-15 8.1E-20 136.0 9.5 76 833-910 12-87 (89)
29 1di2_A XLRBPA, double stranded 99.6 1.2E-15 4.1E-20 130.8 6.7 68 839-908 2-69 (69)
30 3adl_A RISC-loading complex su 99.6 2.8E-15 9.6E-20 135.3 8.2 74 835-910 13-86 (88)
31 2l33_A Interleukin enhancer-bi 99.6 6.5E-15 2.2E-19 134.1 10.5 69 703-773 12-82 (91)
32 1whn_A Hypothetical protein ri 99.6 3.3E-15 1.1E-19 143.5 8.7 69 703-772 24-94 (128)
33 2dmy_A Spermatid perinuclear R 99.6 5E-15 1.7E-19 135.7 9.5 67 703-771 14-82 (97)
34 3adg_A F21M12.9 protein; HYL1, 99.6 3.8E-15 1.3E-19 129.2 8.2 69 837-907 3-72 (73)
35 2khx_A Ribonuclease 3; drosha, 99.6 2.5E-15 8.5E-20 134.8 7.0 73 837-910 1-78 (85)
36 1uil_A Double-stranded RNA-bin 99.6 6.1E-15 2.1E-19 138.8 9.6 70 704-773 25-100 (113)
37 1x49_A Interferon-induced, dou 99.6 3.2E-15 1.1E-19 137.1 7.0 75 835-911 12-86 (97)
38 1ekz_A DSRBDIII, maternal effe 99.6 2.2E-15 7.4E-20 131.6 5.5 70 836-908 6-75 (76)
39 1x48_A Interferon-induced, dou 99.5 2.1E-14 7.2E-19 129.5 11.5 70 836-909 5-75 (88)
40 1uhz_A Staufen (RNA binding pr 99.5 6.2E-15 2.1E-19 133.2 8.0 72 835-908 4-75 (89)
41 2ljh_A Double-stranded RNA-spe 99.5 1.2E-14 4.1E-19 137.3 8.9 65 703-772 35-101 (114)
42 2dix_A Interferon-inducible do 99.5 1.1E-14 3.9E-19 129.9 8.1 73 835-910 6-78 (84)
43 2b7v_A Double-stranded RNA-spe 99.5 4.2E-14 1.4E-18 122.0 9.4 66 703-773 2-69 (71)
44 1whq_A RNA helicase A; double- 99.5 2.4E-14 8.4E-19 131.8 7.7 82 836-920 5-90 (99)
45 3shq_A UBLCP1; phosphatase, hy 99.5 1.8E-14 6E-19 156.4 7.6 120 259-394 162-297 (320)
46 3llh_A RISC-loading complex su 99.5 3E-14 1E-18 128.7 7.5 73 835-910 12-84 (90)
47 2l2n_A Hyponastic leave 1; DSR 99.5 3.6E-14 1.2E-18 131.4 7.4 73 835-909 15-88 (103)
48 2b7v_A Double-stranded RNA-spe 99.5 5.8E-14 2E-18 121.1 7.9 69 835-910 2-70 (71)
49 1x47_A DGCR8 protein; structur 99.5 1.1E-13 3.8E-18 127.1 8.9 73 835-910 14-86 (98)
50 2b7t_A Double-stranded RNA-spe 99.4 6.3E-14 2.2E-18 121.6 6.2 69 836-908 3-71 (73)
51 3p1x_A Interleukin enhancer-bi 99.4 2.6E-13 9E-18 118.8 8.7 64 708-773 7-72 (75)
52 2dmy_A Spermatid perinuclear R 99.4 1E-12 3.6E-17 120.3 12.1 69 835-907 14-82 (97)
53 1uil_A Double-stranded RNA-bin 99.4 1.4E-13 4.9E-18 129.5 6.3 71 836-909 25-100 (113)
54 2ljh_A Double-stranded RNA-spe 99.4 4.7E-13 1.6E-17 126.5 8.9 68 835-909 35-102 (114)
55 1whn_A Hypothetical protein ri 99.4 9.9E-13 3.4E-17 126.4 11.3 70 835-908 24-94 (128)
56 3p1x_A Interleukin enhancer-bi 99.4 1E-12 3.4E-17 115.1 8.6 67 835-908 5-71 (75)
57 1qu6_A Protein kinase PKR; dsR 99.4 5.8E-13 2E-17 133.0 7.7 74 835-910 11-84 (179)
58 2l33_A Interleukin enhancer-bi 99.4 3.9E-13 1.3E-17 122.4 5.8 68 837-908 14-81 (91)
59 1t4n_A Ribonuclease III; DSRBD 99.4 5E-13 1.7E-17 122.6 6.2 71 836-909 5-76 (94)
60 1o0w_A Ribonuclease III, RNAse 99.4 1.4E-12 4.8E-17 136.5 9.9 69 705-773 179-250 (252)
61 2nug_A Ribonuclease III, RNAse 99.3 1.2E-12 4.1E-17 134.2 8.8 67 704-771 149-218 (221)
62 1t4o_A Ribonuclease III; RNT1P 99.3 5.6E-13 1.9E-17 126.5 4.4 83 836-922 7-90 (117)
63 3n3w_A Ribonuclease III; nucle 99.2 1E-12 3.5E-17 137.7 0.0 69 704-772 176-247 (248)
64 2nug_A Ribonuclease III, RNAse 99.2 8.5E-12 2.9E-16 127.9 6.1 70 836-907 149-218 (221)
65 1o0w_A Ribonuclease III, RNAse 99.2 1.1E-11 3.7E-16 129.8 6.6 72 836-908 178-249 (252)
66 2a11_A Ribonuclease III, RNAse 99.2 1.8E-12 6.1E-17 134.5 0.0 70 705-774 162-233 (242)
67 2yt4_A Protein DGCR8; DSRBD, R 99.2 3.2E-11 1.1E-15 125.6 8.5 72 835-909 20-91 (232)
68 2l3j_A Double-stranded RNA-spe 99.2 7.1E-11 2.4E-15 123.1 10.0 64 704-772 160-225 (236)
69 3n3w_A Ribonuclease III; nucle 99.1 4.4E-12 1.5E-16 132.9 0.0 72 836-908 176-247 (248)
70 2a11_A Ribonuclease III, RNAse 99.0 2.4E-11 8.3E-16 126.1 0.0 72 836-909 161-232 (242)
71 3rv0_A K. polysporus DCR1; RNA 99.0 6.2E-11 2.1E-15 129.9 0.0 66 704-772 253-320 (341)
72 3c4b_A Endoribonuclease dicer; 98.9 1.5E-09 5E-14 113.9 8.3 65 707-772 199-263 (265)
73 3rv0_A K. polysporus DCR1; RNA 98.6 3.9E-09 1.3E-13 115.7 0.0 69 835-909 252-321 (341)
74 3c4b_A Endoribonuclease dicer; 98.5 1.2E-07 4.1E-12 99.4 6.4 64 837-908 200-263 (265)
75 3kbb_A Phosphorylated carbohyd 97.8 0.00012 4E-09 71.0 11.7 80 260-349 83-167 (216)
76 3m9l_A Hydrolase, haloacid deh 97.8 5E-05 1.7E-09 73.2 9.1 81 259-349 68-154 (205)
77 3ddh_A Putative haloacid dehal 97.7 0.00011 3.9E-09 70.2 8.9 80 260-349 104-184 (234)
78 3m1y_A Phosphoserine phosphata 97.5 0.00018 6.3E-09 69.1 7.6 80 260-349 74-168 (217)
79 3ed5_A YFNB; APC60080, bacillu 97.5 0.00094 3.2E-08 64.5 12.6 82 260-352 102-191 (238)
80 2pib_A Phosphorylated carbohyd 97.4 0.0006 2.1E-08 64.3 10.3 80 260-349 83-167 (216)
81 3e58_A Putative beta-phosphogl 97.4 0.00026 8.8E-09 66.7 7.6 79 261-349 89-172 (214)
82 2ah5_A COG0546: predicted phos 97.4 0.00047 1.6E-08 67.3 9.2 78 260-349 83-164 (210)
83 3u26_A PF00702 domain protein; 97.4 0.00012 4.2E-09 70.8 5.0 85 260-355 99-190 (234)
84 3kzx_A HAD-superfamily hydrola 97.4 0.00056 1.9E-08 66.5 9.5 80 260-349 102-187 (231)
85 3sd7_A Putative phosphatase; s 97.3 0.0006 2E-08 66.9 9.2 80 260-349 109-194 (240)
86 4dcc_A Putative haloacid dehal 97.3 0.00052 1.8E-08 67.4 8.4 84 261-349 112-200 (229)
87 4ex6_A ALNB; modified rossman 97.3 0.00044 1.5E-08 67.3 7.5 79 261-349 104-187 (237)
88 1nnl_A L-3-phosphoserine phosp 97.3 0.00021 7.1E-09 69.8 5.2 47 260-309 85-132 (225)
89 2hdo_A Phosphoglycolate phosph 97.3 0.00091 3.1E-08 64.2 9.3 79 260-349 82-165 (209)
90 1rku_A Homoserine kinase; phos 97.2 0.00086 2.9E-08 64.6 9.0 76 260-349 68-155 (206)
91 2nyv_A Pgpase, PGP, phosphogly 97.2 0.00081 2.8E-08 66.2 9.0 80 260-349 82-166 (222)
92 3s6j_A Hydrolase, haloacid deh 97.2 0.0021 7.2E-08 61.8 11.4 80 260-349 90-174 (233)
93 2fea_A 2-hydroxy-3-keto-5-meth 97.2 0.00084 2.9E-08 67.0 8.2 37 260-299 76-112 (236)
94 1yns_A E-1 enzyme; hydrolase f 97.2 0.00084 2.9E-08 69.1 8.4 82 260-349 129-214 (261)
95 3mc1_A Predicted phosphatase, 97.1 0.0017 5.7E-08 62.6 10.0 80 260-349 85-169 (226)
96 3qnm_A Haloacid dehalogenase-l 97.1 0.0014 4.7E-08 63.3 9.1 79 260-349 106-189 (240)
97 2zg6_A Putative uncharacterize 97.0 0.0031 1.1E-07 61.7 10.8 88 259-361 93-187 (220)
98 2hsz_A Novel predicted phospha 97.0 0.0029 9.8E-08 63.2 10.7 80 260-349 113-197 (243)
99 2p11_A Hypothetical protein; p 97.0 0.00036 1.2E-08 69.1 4.0 78 260-350 95-172 (231)
100 4eze_A Haloacid dehalogenase-l 97.0 0.00049 1.7E-08 73.8 5.2 39 261-302 179-217 (317)
101 3um9_A Haloacid dehalogenase, 97.0 0.0017 5.8E-08 62.6 8.5 80 260-349 95-179 (230)
102 1zrn_A L-2-haloacid dehalogena 97.0 0.0017 5.8E-08 63.2 8.5 80 260-349 94-178 (232)
103 3kd3_A Phosphoserine phosphohy 97.0 0.0015 5.2E-08 61.9 7.9 77 262-349 83-174 (219)
104 4ap9_A Phosphoserine phosphata 97.0 0.0011 3.7E-08 62.4 6.7 38 261-302 79-116 (201)
105 2w43_A Hypothetical 2-haloalka 96.9 0.0033 1.1E-07 60.2 9.8 76 260-349 73-153 (201)
106 3fvv_A Uncharacterized protein 96.9 0.0021 7E-08 62.9 8.4 45 261-309 92-136 (232)
107 2wm8_A MDP-1, magnesium-depend 96.9 0.0023 7.8E-08 62.0 8.6 81 259-349 66-147 (187)
108 2pke_A Haloacid delahogenase-l 96.9 0.002 6.8E-08 64.0 8.4 79 260-349 111-189 (251)
109 2go7_A Hydrolase, haloacid deh 96.9 0.004 1.4E-07 58.1 9.9 79 260-349 84-167 (207)
110 4eek_A Beta-phosphoglucomutase 96.9 0.0023 8E-08 63.6 8.8 80 260-349 109-195 (259)
111 2no4_A (S)-2-haloacid dehaloge 96.9 0.0029 9.8E-08 62.2 9.2 79 261-349 105-188 (240)
112 3nuq_A Protein SSM1, putative 96.9 0.0015 5E-08 66.4 7.2 80 260-349 141-232 (282)
113 2b0c_A Putative phosphatase; a 96.8 0.00048 1.6E-08 65.6 3.0 83 259-350 89-176 (206)
114 3k1z_A Haloacid dehalogenase-l 96.8 0.0019 6.6E-08 65.3 7.0 85 260-355 105-196 (263)
115 3smv_A S-(-)-azetidine-2-carbo 96.8 0.0012 4.1E-08 63.5 5.2 77 261-351 99-186 (240)
116 3iru_A Phoshonoacetaldehyde hy 96.7 0.0028 9.6E-08 62.8 7.8 81 260-349 110-196 (277)
117 3l5k_A Protein GS1, haloacid d 96.7 0.0031 1E-07 62.4 8.0 81 260-349 111-200 (250)
118 3nas_A Beta-PGM, beta-phosphog 96.7 0.0029 9.9E-08 61.4 7.6 76 262-349 93-173 (233)
119 2i6x_A Hydrolase, haloacid deh 96.7 0.0016 5.5E-08 62.4 5.6 87 259-350 87-178 (211)
120 3qxg_A Inorganic pyrophosphata 96.7 0.0037 1.3E-07 61.5 8.3 81 260-349 108-193 (243)
121 3dv9_A Beta-phosphoglucomutase 96.6 0.0044 1.5E-07 60.3 8.2 81 260-349 107-192 (247)
122 1qq5_A Protein (L-2-haloacid d 96.6 0.0051 1.7E-07 61.4 8.8 78 260-349 92-174 (253)
123 2fi1_A Hydrolase, haloacid deh 96.6 0.006 2.1E-07 57.3 8.4 75 262-349 83-162 (190)
124 4g9b_A Beta-PGM, beta-phosphog 96.5 0.0048 1.6E-07 62.0 7.6 73 261-349 95-176 (243)
125 3skx_A Copper-exporting P-type 96.4 0.012 4.1E-07 58.8 9.9 71 261-349 144-215 (280)
126 3umc_A Haloacid dehalogenase; 96.3 0.0025 8.7E-08 62.5 4.4 77 260-349 119-200 (254)
127 3p96_A Phosphoserine phosphata 96.3 0.0048 1.6E-07 67.6 7.1 41 261-304 256-296 (415)
128 3umg_A Haloacid dehalogenase; 96.3 0.0029 1E-07 61.5 4.5 77 260-349 115-196 (254)
129 2qlt_A (DL)-glycerol-3-phospha 96.2 0.0079 2.7E-07 61.3 7.7 79 260-349 113-204 (275)
130 4gib_A Beta-phosphoglucomutase 96.0 0.014 4.9E-07 58.7 8.2 77 261-349 116-197 (250)
131 3vay_A HAD-superfamily hydrola 95.9 0.023 7.8E-07 54.8 8.8 77 260-352 104-187 (230)
132 2g80_A Protein UTR4; YEL038W, 95.6 0.025 8.7E-07 58.6 8.2 79 260-349 124-214 (253)
133 1l7m_A Phosphoserine phosphata 95.1 0.0064 2.2E-07 57.6 1.8 40 261-303 76-115 (211)
134 2oda_A Hypothetical protein ps 95.1 0.01 3.5E-07 58.9 3.3 74 261-349 36-115 (196)
135 3n28_A Phosphoserine phosphata 95.1 0.035 1.2E-06 58.8 7.3 42 260-304 177-218 (335)
136 2p9j_A Hypothetical protein AQ 95.0 0.047 1.6E-06 51.2 7.1 74 262-349 37-110 (162)
137 3ib6_A Uncharacterized protein 94.2 0.032 1.1E-06 54.2 4.2 85 260-354 33-131 (189)
138 3i28_A Epoxide hydrolase 2; ar 94.2 0.12 4E-06 55.7 8.9 78 260-349 99-187 (555)
139 2i7d_A 5'(3')-deoxyribonucleot 94.1 0.079 2.7E-06 51.3 6.8 39 260-301 72-111 (193)
140 2i33_A Acid phosphatase; HAD s 93.7 0.069 2.4E-06 55.9 5.7 38 261-301 101-141 (258)
141 1q92_A 5(3)-deoxyribonucleotid 93.6 0.086 2.9E-06 51.3 6.0 39 260-301 74-113 (197)
142 3ocu_A Lipoprotein E; hydrolas 93.1 0.12 4E-06 55.2 6.4 74 262-348 102-182 (262)
143 2kou_A Dicer-like protein 4; A 93.1 0.16 5.5E-06 47.0 6.5 67 837-909 4-81 (102)
144 3mmz_A Putative HAD family hyd 92.8 0.081 2.8E-06 51.3 4.3 66 269-349 47-112 (176)
145 2hoq_A Putative HAD-hydrolase 92.4 0.11 3.6E-06 51.2 4.6 83 260-352 93-182 (241)
146 2fpr_A Histidine biosynthesis 92.1 0.25 8.7E-06 47.8 6.8 78 260-349 41-143 (176)
147 3zvl_A Bifunctional polynucleo 91.9 0.052 1.8E-06 60.3 2.0 77 261-349 87-184 (416)
148 2kou_A Dicer-like protein 4; A 91.8 0.41 1.4E-05 44.3 7.5 67 705-773 4-81 (102)
149 3umb_A Dehalogenase-like hydro 91.8 0.19 6.5E-06 48.5 5.5 80 260-349 98-182 (233)
150 3pct_A Class C acid phosphatas 91.7 0.52 1.8E-05 50.2 9.1 76 261-348 101-182 (260)
151 3mn1_A Probable YRBI family ph 91.4 0.093 3.2E-06 51.4 2.9 67 269-349 54-120 (189)
152 2gfh_A Haloacid dehalogenase-l 90.9 0.16 5.6E-06 51.6 4.3 85 260-355 120-211 (260)
153 1k1e_A Deoxy-D-mannose-octulos 90.4 0.24 8.2E-06 47.8 4.7 38 264-304 38-75 (180)
154 2hcf_A Hydrolase, haloacid deh 90.4 0.58 2E-05 44.9 7.4 80 260-349 92-180 (234)
155 3ij5_A 3-deoxy-D-manno-octulos 89.8 0.15 5E-06 51.7 2.8 32 269-303 84-115 (211)
156 2db2_A KIAA0890 protein; DSRM 89.8 0.8 2.7E-05 43.6 7.4 67 706-773 18-90 (119)
157 2b82_A APHA, class B acid phos 89.7 0.084 2.9E-06 53.0 0.9 37 262-301 89-125 (211)
158 2pr7_A Haloacid dehalogenase/e 89.1 0.081 2.8E-06 47.1 0.3 79 262-350 19-102 (137)
159 2hi0_A Putative phosphoglycola 89.1 0.4 1.4E-05 47.4 5.3 79 260-349 109-192 (240)
160 3htx_A HEN1; HEN1, small RNA m 87.7 0.6 2E-05 57.4 6.4 66 703-771 15-94 (950)
161 1y8a_A Hypothetical protein AF 87.3 0.32 1.1E-05 51.5 3.5 36 262-301 104-139 (332)
162 1qyi_A ZR25, hypothetical prot 87.0 0.37 1.3E-05 53.6 3.9 52 260-321 214-267 (384)
163 1te2_A Putative phosphatase; s 86.3 0.91 3.1E-05 42.9 5.7 79 261-349 94-177 (226)
164 3cnh_A Hydrolase family protei 85.8 0.42 1.4E-05 45.2 3.1 79 261-350 86-169 (200)
165 2om6_A Probable phosphoserine 85.6 0.79 2.7E-05 43.8 4.9 80 262-351 100-189 (235)
166 3d6j_A Putative haloacid dehal 84.4 1.5 5E-05 41.4 6.1 79 261-349 89-172 (225)
167 3l8h_A Putative haloacid dehal 83.2 1.1 3.7E-05 42.3 4.7 77 261-349 27-128 (179)
168 4as2_A Phosphorylcholine phosp 81.8 2.3 7.8E-05 46.3 7.1 38 261-301 143-180 (327)
169 2db2_A KIAA0890 protein; DSRM 77.6 1.6 5.5E-05 41.5 3.6 37 873-910 52-91 (119)
170 2gmw_A D,D-heptose 1,7-bisphos 77.0 2.1 7.1E-05 42.2 4.5 39 261-302 50-103 (211)
171 3bwv_A Putative 5'(3')-deoxyri 75.4 1.8 6E-05 41.2 3.4 69 260-350 68-139 (180)
172 3r4c_A Hydrolase, haloacid deh 74.0 1.6 5.6E-05 43.7 2.9 12 144-155 14-25 (268)
173 3a1c_A Probable copper-exporti 73.0 3.2 0.00011 42.8 4.9 73 260-349 162-234 (287)
174 2c4n_A Protein NAGD; nucleotid 73.0 1.4 4.8E-05 42.3 2.0 24 144-169 5-28 (250)
175 3zx4_A MPGP, mannosyl-3-phosph 72.1 1.1 3.6E-05 45.4 1.0 28 143-172 1-28 (259)
176 3pdw_A Uncharacterized hydrola 71.9 1.9 6.6E-05 43.2 2.8 29 144-174 8-36 (266)
177 3epr_A Hydrolase, haloacid deh 71.8 1.8 6.3E-05 43.6 2.7 28 144-173 7-34 (264)
178 2amy_A PMM 2, phosphomannomuta 71.5 2.4 8.2E-05 42.5 3.4 31 142-174 6-37 (246)
179 1wr8_A Phosphoglycolate phosph 71.4 2.2 7.5E-05 42.5 3.1 28 144-173 5-33 (231)
180 3gyg_A NTD biosynthesis operon 71.4 2.2 7.4E-05 43.6 3.1 16 142-157 22-37 (289)
181 1xpj_A Hypothetical protein; s 71.0 2.2 7.6E-05 39.4 2.9 14 144-157 3-16 (126)
182 2wf7_A Beta-PGM, beta-phosphog 69.8 2.1 7.2E-05 40.5 2.4 77 261-349 91-172 (221)
183 3dao_A Putative phosphatse; st 69.7 2.3 7.9E-05 43.5 2.9 32 143-174 22-53 (283)
184 2zos_A MPGP, mannosyl-3-phosph 69.1 1.8 6.2E-05 43.8 1.9 27 144-173 4-30 (249)
185 3qgm_A P-nitrophenyl phosphata 68.9 2.4 8.2E-05 42.5 2.8 28 144-173 10-37 (268)
186 2hoq_A Putative HAD-hydrolase 68.6 2.3 7.7E-05 41.6 2.5 14 144-157 4-17 (241)
187 1rlm_A Phosphatase; HAD family 68.4 2 7E-05 43.7 2.2 28 144-173 5-34 (271)
188 2om6_A Probable phosphoserine 68.2 2.4 8.1E-05 40.4 2.4 14 144-157 6-19 (235)
189 1te2_A Putative phosphatase; s 68.1 2.6 8.9E-05 39.8 2.7 13 144-156 11-23 (226)
190 2hcf_A Hydrolase, haloacid deh 67.7 2.4 8.1E-05 40.6 2.3 14 144-157 6-19 (234)
191 2rbk_A Putative uncharacterize 67.4 2.7 9.3E-05 42.3 2.8 30 144-173 4-33 (261)
192 2fue_A PMM 1, PMMH-22, phospho 67.2 3.1 0.0001 42.4 3.2 29 143-173 14-43 (262)
193 3d6j_A Putative haloacid dehal 67.0 2.7 9.3E-05 39.6 2.6 13 144-156 8-20 (225)
194 1rkq_A Hypothetical protein YI 66.9 2.8 9.4E-05 43.2 2.8 29 144-174 7-36 (282)
195 1ltq_A Polynucleotide kinase; 66.7 1.8 6.3E-05 44.6 1.4 80 259-350 186-281 (301)
196 3fzq_A Putative hydrolase; YP_ 66.2 2.8 9.5E-05 41.9 2.6 27 144-172 7-34 (274)
197 2wf7_A Beta-PGM, beta-phosphog 66.1 4.8 0.00016 38.0 4.1 14 144-157 4-17 (221)
198 4dw8_A Haloacid dehalogenase-l 65.8 3 0.0001 42.1 2.8 29 144-173 7-35 (279)
199 2pq0_A Hypothetical conserved 65.7 3 0.0001 41.7 2.7 29 144-173 5-33 (258)
200 3l7y_A Putative uncharacterize 65.6 3.1 0.00011 43.1 2.9 28 144-173 39-68 (304)
201 3mpo_A Predicted hydrolase of 65.4 2.9 9.9E-05 42.2 2.6 28 144-173 7-35 (279)
202 2x4d_A HLHPP, phospholysine ph 65.0 2.2 7.6E-05 41.8 1.6 13 144-156 14-26 (271)
203 1s2o_A SPP, sucrose-phosphatas 64.8 2.9 9.9E-05 42.3 2.4 27 143-171 4-30 (244)
204 2hi0_A Putative phosphoglycola 64.7 3.1 0.00011 40.9 2.6 13 144-156 6-18 (240)
205 1yv9_A Hydrolase, haloacid deh 64.7 3.2 0.00011 41.5 2.7 27 262-293 127-153 (264)
206 3dnp_A Stress response protein 64.7 3.1 0.00011 42.1 2.7 29 144-173 8-36 (290)
207 3htx_A HEN1; HEN1, small RNA m 64.3 6.7 0.00023 48.4 5.8 69 838-907 18-94 (950)
208 3bwv_A Putative 5'(3')-deoxyri 64.1 2.3 7.7E-05 40.4 1.4 15 143-157 5-19 (180)
209 1swv_A Phosphonoacetaldehyde h 63.8 4 0.00014 40.3 3.2 80 261-349 103-188 (267)
210 2o2x_A Hypothetical protein; s 63.7 4.7 0.00016 39.6 3.6 39 261-302 56-109 (218)
211 2ho4_A Haloacid dehalogenase-l 62.8 2.8 9.5E-05 41.3 1.8 31 262-297 123-153 (259)
212 1nf2_A Phosphatase; structural 62.6 3.9 0.00013 41.6 3.0 26 144-171 4-30 (268)
213 1swv_A Phosphonoacetaldehyde h 61.9 4.1 0.00014 40.3 2.8 15 144-158 8-22 (267)
214 2yj3_A Copper-transporting ATP 66.0 1.6 5.6E-05 44.8 0.0 75 259-349 134-208 (263)
215 2fdr_A Conserved hypothetical 61.5 8.5 0.00029 36.6 4.9 77 260-349 86-170 (229)
216 3pgv_A Haloacid dehalogenase-l 61.3 4.4 0.00015 41.4 3.0 28 144-173 23-51 (285)
217 3cnh_A Hydrolase family protei 61.1 2.6 8.8E-05 39.8 1.2 14 144-157 6-19 (200)
218 1vjr_A 4-nitrophenylphosphatas 60.6 2.9 0.0001 41.8 1.5 28 142-171 17-44 (271)
219 2fdr_A Conserved hypothetical 60.4 2.7 9.3E-05 40.1 1.2 14 144-157 6-19 (229)
220 2obb_A Hypothetical protein; s 56.5 4.5 0.00015 39.3 2.0 30 144-173 5-37 (142)
221 1nrw_A Hypothetical protein, h 56.3 5.7 0.00019 40.8 2.9 28 144-172 6-33 (288)
222 4gxt_A A conserved functionall 56.0 8.1 0.00028 42.8 4.2 41 260-303 220-260 (385)
223 2gfh_A Haloacid dehalogenase-l 55.8 3.6 0.00012 41.7 1.3 15 143-157 19-33 (260)
224 3umb_A Dehalogenase-like hydro 54.0 3.9 0.00013 39.2 1.1 13 144-156 6-18 (233)
225 3f9r_A Phosphomannomutase; try 53.4 7.2 0.00025 39.8 3.1 29 144-173 6-34 (246)
226 1xvi_A MPGP, YEDP, putative ma 52.2 4.8 0.00016 41.4 1.6 32 142-174 9-40 (275)
227 2gmw_A D,D-heptose 1,7-bisphos 51.3 8.3 0.00028 37.9 3.0 22 135-157 19-40 (211)
228 3nvb_A Uncharacterized protein 51.1 12 0.00042 41.8 4.7 81 263-349 258-338 (387)
229 3e8m_A Acylneuraminate cytidyl 50.6 4.9 0.00017 37.4 1.2 67 269-349 39-105 (164)
230 2b30_A Pvivax hypothetical pro 49.6 8.2 0.00028 40.4 2.8 28 144-173 29-58 (301)
231 1u02_A Trehalose-6-phosphate p 47.6 11 0.00036 38.0 3.2 12 144-155 3-14 (239)
232 2hx1_A Predicted sugar phospha 47.5 6.6 0.00022 39.9 1.7 36 136-174 9-44 (284)
233 2pr7_A Haloacid dehalogenase/e 45.7 11 0.00037 33.2 2.6 11 144-154 4-14 (137)
234 2oyc_A PLP phosphatase, pyrido 45.3 7.4 0.00025 40.3 1.7 36 136-174 16-51 (306)
235 1l6r_A Hypothetical protein TA 42.3 9.7 0.00033 38.2 1.9 28 144-173 7-35 (227)
236 1zjj_A Hypothetical protein PH 39.8 10 0.00036 38.2 1.7 27 144-172 3-29 (263)
237 1jey_B KU80; double-strand DNA 37.0 67 0.0023 37.1 8.0 84 38-128 338-426 (565)
238 3a1c_A Probable copper-exporti 33.8 13 0.00043 38.4 1.2 14 144-157 34-47 (287)
239 1jey_A KU70; double-strand DNA 31.5 96 0.0033 36.3 8.2 86 36-128 341-439 (609)
240 2r8e_A 3-deoxy-D-manno-octulos 31.1 14 0.00049 35.6 1.1 67 269-349 61-127 (188)
241 3l8h_A Putative haloacid dehal 30.8 16 0.00053 34.3 1.2 13 144-156 3-15 (179)
242 4fe3_A Cytosolic 5'-nucleotida 30.2 26 0.00088 36.2 2.8 40 260-302 140-179 (297)
243 3n1u_A Hydrolase, HAD superfam 29.7 20 0.00068 35.0 1.8 30 270-302 55-84 (191)
244 3n07_A 3-deoxy-D-manno-octulos 29.4 17 0.00057 36.1 1.2 30 270-302 61-90 (195)
245 2r8e_A 3-deoxy-D-manno-octulos 28.2 46 0.0016 32.0 4.1 14 143-156 27-40 (188)
246 3n1u_A Hydrolase, HAD superfam 28.1 18 0.00063 35.3 1.2 13 144-156 21-33 (191)
247 2qvw_A GLP_546_48378_50642; di 26.9 8.5 0.00029 46.6 -1.7 41 705-772 447-497 (756)
248 3k6q_A Putative ligand binding 26.1 1.4E+02 0.0047 29.4 6.9 58 706-771 39-96 (139)
249 3e8m_A Acylneuraminate cytidyl 25.7 41 0.0014 31.1 3.1 14 144-157 6-19 (164)
250 3ewi_A N-acylneuraminate cytid 24.4 24 0.00081 34.4 1.2 63 270-349 45-109 (168)
251 3n07_A 3-deoxy-D-manno-octulos 23.9 26 0.0009 34.6 1.5 11 144-154 27-37 (195)
252 3ib6_A Uncharacterized protein 23.9 24 0.00083 33.8 1.2 12 144-155 5-16 (189)
253 2qv6_A MJ0145, GTP cyclohydrol 23.0 65 0.0022 34.6 4.3 28 745-773 212-239 (268)
254 2o2x_A Hypothetical protein; s 20.2 52 0.0018 32.1 2.8 14 143-156 32-45 (218)
No 1
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Probab=99.97 E-value=1.3e-31 Score=267.53 Aligned_cols=161 Identities=20% Similarity=0.205 Sum_probs=132.7
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhhhccccC
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVYMLRVKS 780 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~~~a~~~~ 780 (957)
.++|||+.||||||+++..++|+++.+ ++|++.|+++|+|+|+.+|+|.|+|||+|||+||+.||+.|...... .
T Consensus 11 ~~~n~ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~~~~~-~-- 87 (179)
T 1qu6_A 11 SAGFFMEELNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEKKA-V-- 87 (179)
T ss_dssp SSCSHHHHHHHHHHHHTCCCEEEEEESCBTTTBCCEEEEEESSSSCCCEEECCSSHHHHHHHHHHHHHHHHSCCSC-C--
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeeccCCCCCCeEEEEEEECCEEEEecCCCCHHHHHHHHHHHHHHHHhccccc-C--
Confidence 457899999999999998899998754 67999999999999999999999999999999999999999753210 0
Q ss_pred CCCCCCCCCCCCCCcccccccCcCCCCCCCCCCcCcCCCCCCCCcCCCcccCCCCCCChhHHHHHHhhhcCCceeeeecC
Q 002166 781 DSGSGHGDGSRFSNANENCFMGEINSFGGQPLAKDESLSSEPSKLVDPRLEGSKKLMGSVSALKELCMTEGLGVVFQQQP 860 (957)
Q Consensus 781 ~~~~~~~D~~~~p~~~eN~f~~~~ns~~~~~~s~~d~~sse~srl~~~~l~~s~~~~NpVglLNELcqkeGL~v~f~~~~ 860 (957)
++.. .+. . +.++ ....+|||++||||||+.++.+.|...
T Consensus 88 -------~p~~------------------~~~--~--~~~e-----------~~~~~n~~~~L~E~~qk~~~~~~Y~~~- 126 (179)
T 1qu6_A 88 -------SPLL------------------LTT--T--NSSE-----------GLSMGNYIGLINRIAQKKRLTVNYEQC- 126 (179)
T ss_dssp -------SCSS------------------CCC--S--CSSC-----------CCCCCCCHHHHHHHHHHSCCEEEEEEE-
T ss_pred -------CCcc------------------CCC--C--Cccc-----------ccCCCCHHHHHHHHHHhcCCcceEEec-
Confidence 0000 000 0 0011 114579999999999999999976643
Q ss_pred CCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhc
Q 002166 861 PSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 861 ~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~ 909 (957)
.+|++|.+.|+|+|+|+|+.|+.|+|+|||+||++||+.||..|...
T Consensus 127 --~~G~~h~~~F~~~v~v~~~~~~~g~g~sKK~Ak~~AA~~al~~L~~~ 173 (179)
T 1qu6_A 127 --ASGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYLQILSE 173 (179)
T ss_dssp --EECSSSSSEEEEEEEEETTBCCEEEESSHHHHHHHHHHHHHHHHHHC
T ss_pred --CcCCCCCCeEEEEEEECCEEEeeEEECCHHHHHHHHHHHHHHHHhcc
Confidence 58999999999999999999999999999999999999999999753
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=99.96 E-value=9.7e-30 Score=280.32 Aligned_cols=200 Identities=22% Similarity=0.366 Sum_probs=159.7
Q ss_pred hhHHHHhhcceeeEEEeCccchhhhccccchHHHHHHHHhhhccCCChhhhhhhHHHHHHhhhhHHHHHHHhhcCccccC
Q 002166 132 NSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKISTEVDPQRIAGMQAEVKRYQDDKNILKQYAENDQVNEN 211 (957)
Q Consensus 132 ~~~~~ml~~r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~~~~~dp~~~~~~~~e~kr~~~D~~lL~q~~~~d~v~~~ 211 (957)
++..|||..+|+.||||||||||++.... .+ ..|.+...+|+. ...++|+.|+.
T Consensus 8 ~~~~rl~~~~k~~LVlDLD~TLvhS~~~~----~~---~~w~~~~~~~~~--~~~~dv~~f~~----------------- 61 (372)
T 3ef0_A 8 ENVKRLRQEKRLSLIVDLDQTIIHATVDP----TV---GEWMSDPGNVNY--DVLRDVRSFNL----------------- 61 (372)
T ss_dssp HHHHHHHHHTCEEEEECCBTTTEEEECCT----HH---HHHHTCTTSTTT--GGGTTCEEEEE-----------------
T ss_pred HHHHHHHhCCCCEEEEcCCCCcccccCcC----cc---chhhccCCCCch--hhhhhhhceee-----------------
Confidence 46689999999999999999999997443 22 468877777775 23333333331
Q ss_pred CeEEEeecccccCCCccccccccceEeccccceeeeecCCCCCCceEEEeeCcChHHHHHHHhhhccccEEEEEEeCCcH
Q 002166 212 GKVIKVQSEVVPALSDSHQALVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAER 291 (957)
Q Consensus 212 G~~~~~q~E~~~~~~d~~~~~~rpvirl~~~n~~ltrI~P~~r~~~~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR 291 (957)
...+....++|||++|||+++ ||+ ++++.|||+|||+|++
T Consensus 62 ------------------------------------~~~~~~~~~~~~v~~RPg~~e---FL~-~l~~~yeivI~Tas~~ 101 (372)
T 3ef0_A 62 ------------------------------------QEGPSGYTSCYYIKFRPGLAQ---FLQ-KISELYELHIYTMGTK 101 (372)
T ss_dssp ------------------------------------EETTTTEEEEEEEEECTTHHH---HHH-HHHTTEEEEEECSSCH
T ss_pred ------------------------------------eeccCCceEEEEEEECcCHHH---HHH-HHhcCcEEEEEeCCcH
Confidence 001122357899999999999 998 8899999999999999
Q ss_pred HHHHHHHHhhCCCCCccccccccCeEEeccCC---CccchhhhccCCCCCCcEEEEEcCCcccCCCCCCCCeEEeccccC
Q 002166 292 DYALEMWRLLDPESNLINTKELLDRIVCVKSG---SRKSLFNVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAP 368 (957)
Q Consensus 292 ~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg---~~KsL~~lfp~g~~~~~mvVIIDDR~dVW~~~~~~~v~vV~~Y~p 368 (957)
.||..|++.|||+++||. +||++|+++ ..|+|++||+ +++++||||||+.++|..+ + |.+.|++|.|
T Consensus 102 ~yA~~vl~~LDp~~~~f~-----~ri~sr~~~g~~~~KdL~~L~~---~dl~~viiiDd~~~~~~~~-p-N~I~i~~~~~ 171 (372)
T 3ef0_A 102 AYAKEVAKIIDPTGKLFQ-----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVWDWN-P-NLIKVVPYEF 171 (372)
T ss_dssp HHHHHHHHHHCTTSCSSS-----SCEECTTTSSCSSCCCGGGTCS---SCCTTEEEEESCSGGGTTC-T-TEEECCCCCC
T ss_pred HHHHHHHHHhccCCceee-----eEEEEecCCCCcceecHHHhcC---CCCceEEEEeCCHHHcCCC-C-cEeeeCCccc
Confidence 999999999999999999 999999654 4699999997 7899999999999999988 3 7888999999
Q ss_pred ccCc---------h----------------------------------hh---------hcccCchHHHHHHHHhhhccc
Q 002166 369 YYAP---------Q----------------------------------AE---------ANNAIPVLCVARNIACNVRGG 396 (957)
Q Consensus 369 f~~~---------q----------------------------------~e---------~~~~~p~L~~a~~vl~~Vh~~ 396 (957)
|... . +| ..+.+..|..++++|.+||..
T Consensus 172 f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~~~~d~D~~L~~~~~~L~~iH~~ 251 (372)
T 3ef0_A 172 FVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAV 251 (372)
T ss_dssp STTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGCSCCCCCCHHHHHHHHHHHHHHH
T ss_pred cCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhccccCChHHHHHHHHHHHHHHHH
Confidence 9621 0 00 012467899999999999999
Q ss_pred chhcchhhhhh
Q 002166 397 FFKEFDEGLLQ 407 (957)
Q Consensus 397 FF~~~De~l~~ 407 (957)
||.++|.....
T Consensus 252 Ff~~~~~~~~~ 262 (372)
T 3ef0_A 252 YYEEENDISSR 262 (372)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhhhccc
Confidence 99998876443
No 3
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.1e-29 Score=284.90 Aligned_cols=163 Identities=23% Similarity=0.415 Sum_probs=136.0
Q ss_pred hHHHHhhcceeeEEEeCccchhhhccccchHHHHHHHHhhhccCCChhhhhhhHHHHHHhhhhHHHHHHHhhcCccccCC
Q 002166 133 SCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKISTEVDPQRIAGMQAEVKRYQDDKNILKQYAENDQVNENG 212 (957)
Q Consensus 133 ~~~~ml~~r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~~~~~dp~~~~~~~~e~kr~~~D~~lL~q~~~~d~v~~~G 212 (957)
...+||..|||.||+||||||||+... .. +.+|+.+..||++- ..++|.+|+.
T Consensus 17 ~~~rll~~~Kl~LVLDLDeTLiHs~~~----~~---~~~~~~~~~~~~~~--~~~dv~~F~l------------------ 69 (442)
T 3ef1_A 17 NVKRLRQEKRLSLIVXLDQTIIHATVD----PT---VGEWMSDPGNVNYD--VLRDVRSFNL------------------ 69 (442)
T ss_dssp HHHHHHHTTCEEEEECCBTTTEEEECC----TH---HHHHHTCTTSTTTG--GGTTCEEEEE------------------
T ss_pred HHHHHHhcCCeEEEEeeccceeccccc----cc---cchhccCCCCcchh--hhccccceee------------------
Confidence 457899999999999999999999744 33 35899999999862 2344444441
Q ss_pred eEEEeecccccCCCccccccccceEeccccceeeeecCCCCCCceEEEeeCcChHHHHHHHhhhccccEEEEEEeCCcHH
Q 002166 213 KVIKVQSEVVPALSDSHQALVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERD 292 (957)
Q Consensus 213 ~~~~~q~E~~~~~~d~~~~~~rpvirl~~~n~~ltrI~P~~r~~~~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~ 292 (957)
.+.|....++|||++|||+.+ ||+ +++++|||+|||+|.+.
T Consensus 70 -----------------------------------~~~~~~~~~~~~V~~RPgl~e---FL~-~ls~~yEivIfTas~~~ 110 (442)
T 3ef1_A 70 -----------------------------------QEGPSGYTSCYYIKFRPGLAQ---FLQ-KISELYELHIYTMGTKA 110 (442)
T ss_dssp -----------------------------------EETTTTEEEEEEEEECTTHHH---HHH-HHTTTEEEEEECSSCHH
T ss_pred -----------------------------------eeccCCceeEEEEEeCCCHHH---HHH-HHhCCcEEEEEcCCCHH
Confidence 111222357899999999999 998 89999999999999999
Q ss_pred HHHHHHHhhCCCCCccccccccCeEEeccCC---CccchhhhccCCCCCCcEEEEEcCCcccCCCCCCCCeEEeccccCc
Q 002166 293 YALEMWRLLDPESNLINTKELLDRIVCVKSG---SRKSLFNVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPY 369 (957)
Q Consensus 293 YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg---~~KsL~~lfp~g~~~~~mvVIIDDR~dVW~~~~~~~v~vV~~Y~pf 369 (957)
||..|+++|||+++||+ +||++|+++ ..|+|.+||+ ++.++||||||+.++|..+ + |.+.|++|.||
T Consensus 111 YA~~Vl~~LDp~~~~f~-----~Rl~sRd~cg~~~~KdL~~ll~---rdl~~vvIIDd~p~~~~~~-p-N~I~I~~~~fF 180 (442)
T 3ef1_A 111 YAKEVAKIIDPTGKLFQ-----DRVLSRDDSGSLAQKSLRRLFP---CDTSMVVVIDDRGDVWDWN-P-NLIKVVPYEFF 180 (442)
T ss_dssp HHHHHHHHHCTTSTTTT-----TCEECTTTSSCSSCCCGGGTCS---SCCTTEEEEESCSGGGTTC-T-TEEECCCCCCS
T ss_pred HHHHHHHHhccCCcccc-----ceEEEecCCCCceeeehHHhcC---CCcceEEEEECCHHHhCCC-C-CEEEcCCcccc
Confidence 99999999999999999 999999654 4699999997 8899999999999999988 3 78889999988
Q ss_pred cC
Q 002166 370 YA 371 (957)
Q Consensus 370 ~~ 371 (957)
..
T Consensus 181 ~~ 182 (442)
T 3ef1_A 181 VG 182 (442)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 4
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Probab=99.94 E-value=3.2e-25 Score=230.74 Aligned_cols=197 Identities=21% Similarity=0.203 Sum_probs=132.5
Q ss_pred CCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhhhcc-----
Q 002166 705 ETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVYMLR----- 777 (957)
Q Consensus 705 ~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~~~a~----- 777 (957)
-++|+.|++|++. ...+.|+++.+ ++|+++|+++|+|+|+.+ +|.|+|||+|||+||+.||+.|.....+.
T Consensus 4 ~~~K~~l~~l~e~-~~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~l~~~~~~~~~~~a 81 (236)
T 2l3j_A 4 VLPKNALMQLNEI-KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQFPNASEAHLA 81 (236)
T ss_dssp CCTHHHHHHHHHH-CSSCEEEEEEEESCTTSCEEEEEEEETTEEE-EEEESHHHHHHHHHHHHHHHHHTTCSSCSCCCCS
T ss_pred CCCcCHHHHHhhc-CCCceEEEEeccCCCCCCeEEEEEEECCEEE-EEecCChHHHHHHHHHHHHHHHHhccccccchhh
Confidence 4689999999986 34579999764 679999999999999985 99999999999999999999997632110
Q ss_pred ---ccCCCCCCCCCCCCCCCcccccccCcCCCCCCC-CCCcCcCCCCCC--CCc---------CCCcccC-----CCCCC
Q 002166 778 ---VKSDSGSGHGDGSRFSNANENCFMGEINSFGGQ-PLAKDESLSSEP--SKL---------VDPRLEG-----SKKLM 837 (957)
Q Consensus 778 ---~~~~~~~~~~D~~~~p~~~eN~f~~~~ns~~~~-~~s~~d~~sse~--srl---------~~~~l~~-----s~~~~ 837 (957)
..+...++++|..++|...++++.......... .....+...... ..+ -...++. .....
T Consensus 82 mg~~~~~~~d~~~d~~~~p~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~~~~~~ 161 (236)
T 2l3j_A 82 MGRTLSVNTDFTSDQADFPDTLFNGFETPDKSEPPFYVGSNGDDSFSSSGDVSLSASPVPASLTQPPLPIPPPFPPPSGK 161 (236)
T ss_dssp CCCCCCCTTSCCSCCSCCCCCCCCCCCCSSSSCCCSSCSSSCSSSSSCSCCCSSCCCCCCCCSSSCSSSSCCCCCCCSSC
T ss_pred hccCCCCCCCCcccccccchhhcccccccccccccccccccccccccccchhhccccccccccccccCccccccCCCCCC
Confidence 011223466676666655555554321100000 000000000000 000 0011110 11456
Q ss_pred ChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 838 GSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 838 NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
||+++||||+. ...|.++ ..+|++|.+.|+++|+|+|++| .|+|+|||+|||+||+.||..|..+.
T Consensus 162 d~ks~LqE~~~--~p~Y~~~----~~~Gp~h~~~F~~~v~v~~~~~-~G~G~sKK~Aeq~AA~~al~~L~~~~ 227 (236)
T 2l3j_A 162 NPVMILNELRP--GLKYDFL----SESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFNLH 227 (236)
T ss_dssp CHHHHHHHHCC--CEEEEEE----CCSSSSSSCCEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHhcCC--CCcEEEE----EeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHcccc
Confidence 99999999943 3333333 3589999999999999999998 99999999999999999999997543
No 5
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=240.00 Aligned_cols=176 Identities=15% Similarity=0.170 Sum_probs=122.1
Q ss_pred CCCCchHHHHHHHHhcCC-CeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhhhccccCC
Q 002166 703 STETPSGVLQDIAMKCGT-KVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVYMLRVKSD 781 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~-~~~Y~~v~~~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~~~a~~~~~ 781 (957)
...+||+.||||||+++. .+.|+++...+.++.|+++|+|+|+.||.|.|+|||+|||+||+.||+.|.......++.
T Consensus 20 ~~kd~ks~LqE~~q~~~~~~p~Y~~~~~~Gp~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~aL~~L~~~~~~~~~~- 98 (232)
T 2yt4_A 20 NGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQTSE- 98 (232)
T ss_dssp TTSCHHHHHHHHHHHTTCCCCEEEEEECSCTTSCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHSTTTTTC----
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEeeECCCCcEEEEEEECCEEEeecCCCCHHHHHHHHHHHHHHHHHhhccccCCc-
Confidence 456899999999999986 479999876655599999999999999999999999999999999999997642210000
Q ss_pred CCCCCCCCCCCCCcccccccCcCCCCCCCCCCcCcCCCCCCCCcCCCcccCCCCCCChhHHHHHHhhhcCCceeeee--c
Q 002166 782 SGSGHGDGSRFSNANENCFMGEINSFGGQPLAKDESLSSEPSKLVDPRLEGSKKLMGSVSALKELCMTEGLGVVFQQ--Q 859 (957)
Q Consensus 782 ~~~~~~D~~~~p~~~eN~f~~~~ns~~~~~~s~~d~~sse~srl~~~~l~~s~~~~NpVglLNELcqkeGL~v~f~~--~ 859 (957)
. ++ +++. +...+ ...... ..+...+ .......||+++||| |++.++.++.|. .
T Consensus 99 --~---~~--------~~~~-~~~~~-------~~~~~~-~~~~~~~--~~~~~~~d~kt~LqE-~~~~~~~~p~Y~~~~ 153 (232)
T 2yt4_A 99 --E---KP--------KDSE-ELEYF-------NHISIE-DSRVYEL--TSKAGLLSPYQILHE-CLKRNHGMGDTSIKF 153 (232)
T ss_dssp ------------------CC-GGGGG-------GGSBTT-CTTHHHH--HHHHTCCCHHHHHHH-HHHTSSSCCCEEEEC
T ss_pred --c---cc--------cccc-chhhc-------cccccc-CCccccc--ccccCCCChhHHHHH-HHHcCCCCCceEEEE
Confidence 0 00 0000 00000 000000 0000000 001245799999999 999999888776 4
Q ss_pred CCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 860 PPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 860 ~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
+..+|++|.+.|+|+|. ..++.|+|+|||+|||+||+.||..|+.
T Consensus 154 -~~~~Gp~h~~~F~~~v~---~~~~~G~G~sKK~Aeq~AA~~aL~~L~~ 198 (232)
T 2yt4_A 154 -EVVPGKNQKSEYVMACG---KHTVRGWCKNKRVGKQLASQKILQLLHP 198 (232)
T ss_dssp -C------CCEEEEEEET---TEEEEEEESSHHHHHHHHHHHHHHHHST
T ss_pred -eecCCCCCCCEEEEEEE---EEEEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 45689999999999887 5577999999999999999999999874
No 6
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=99.74 E-value=6.7e-18 Score=172.89 Aligned_cols=113 Identities=12% Similarity=0.087 Sum_probs=89.7
Q ss_pred EEEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-----C-Cccchhhh
Q 002166 258 VLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-----G-SRKSLFNV 331 (957)
Q Consensus 258 ~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-----g-~~KsL~~l 331 (957)
++|++|||+++ ||+ .+++.|||+|||+|.+.||+.|++.|||.+.+|. .|+ .|++ | ..|+|+.|
T Consensus 56 ~~v~~RPgl~e---FL~-~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~-----~rl-~R~~c~~~~g~y~KdL~~L 125 (204)
T 3qle_A 56 WRTAKRPGADY---FLG-YLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVS-----YNL-FKEHCVYKDGVHIKDLSKL 125 (204)
T ss_dssp EEEEECTTHHH---HHH-HHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEE-----EEE-CGGGSEEETTEEECCGGGS
T ss_pred eeEEeCCCHHH---HHH-HHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEE-----EEE-EecceeEECCeeeecHHHh
Confidence 68999999999 998 8899999999999999999999999999999998 554 4433 2 46999988
Q ss_pred ccCCCCCCcEEEEEcCCcccCCCCCCCCeEEeccccCccCchhhhcccCchHHHHHHHHhhhc
Q 002166 332 FQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVR 394 (957)
Q Consensus 332 fp~g~~~~~mvVIIDDR~dVW~~~~~~~v~vV~~Y~pf~~~q~e~~~~~p~L~~a~~vl~~Vh 394 (957)
- .+.+.||||||+...|..+. .|.+.|++|. . . .+. .|.....+|+.+.
T Consensus 126 g----rdl~~vIiIDDsp~~~~~~p-~N~I~I~~~~--~-~-----~D~-eL~~L~~~L~~L~ 174 (204)
T 3qle_A 126 N----RDLSKVIIIDTDPNSYKLQP-ENAIPMEPWN--G-E-----ADD-KLVRLIPFLEYLA 174 (204)
T ss_dssp C----SCGGGEEEEESCTTTTTTCG-GGEEECCCCC--S-S-----CCC-HHHHHHHHHHHHH
T ss_pred C----CChHHEEEEECCHHHHhhCc-cCceEeeeEC--C-C-----CCh-hHHHHHHHHHHHh
Confidence 3 57899999999999998874 4566787773 2 1 122 4655666666654
No 7
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=99.69 E-value=3e-17 Score=143.71 Aligned_cols=69 Identities=19% Similarity=0.183 Sum_probs=63.2
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 704 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~-~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
++||||.||||||+.+.. ++|+++.+ ++|++.|+++|+|+|+.+|.|.|+|||+|||.||+.||+.|..
T Consensus 3 ~~n~Kt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~ 74 (76)
T 3adj_A 3 HGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQS 74 (76)
T ss_dssp CHHHHHHHHHHHHTTTCCCCEEEEEEEECSSSCEEEEEEEEETTEEEECCCBSSHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEeeccCCCCCCcEEEEEEECCEEEEEeccCCHHHHHHHHHHHHHHHHhh
Confidence 468999999999999865 79998764 6899999999999999999999999999999999999999864
No 8
>2dix_A Interferon-inducible double stranded RNA- dependent protein kinase activator A; structure genomics, DSRM domain, hypothetical protein PRKRA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.69 E-value=6.8e-17 Score=144.28 Aligned_cols=71 Identities=24% Similarity=0.244 Sum_probs=64.3
Q ss_pred CCCCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 701 VSSTETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 701 ~~~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
.....+||+.||||||+.+..++|+++.+ ++|+++|+++|+|+| .+|+|.|+|||+|||+||+.||+.|..
T Consensus 4 ~~~~~d~Ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~-~~~~G~G~SKK~Aeq~AA~~aL~~L~~ 76 (84)
T 2dix_A 4 GSSGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRVTVGD-ITCTGEGTSKKLAKHRAAEAAINILKA 76 (84)
T ss_dssp CCCCCCHHHHHHHHHHHTTCCCEEEEEEEECSSSSCEEEEEEEETT-EEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHcCCCCeEEEEEeECCCCCCeEEEEEEECC-EEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 34567899999999999887789998764 679999999999999 999999999999999999999999964
No 9
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.69 E-value=3.6e-17 Score=150.04 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=65.6
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
.+.|||+.||||||+++..++|+++.+ ++|++.|+++|+|+|+.+|.|.|+|||+|||+||+.||+.|...
T Consensus 12 ~~~n~Kt~LqE~~Q~~~~~p~Y~~~~~~Gp~H~~~F~v~v~i~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 84 (97)
T 1x49_A 12 TPGFYMDKLNKYRQMHGVAITYKELSTSGPPHDRRFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAVDILDNE 84 (97)
T ss_dssp CTTHHHHHHHHHHHHHTCCEEEEEEEEESCSSSCEEEEEEEESSCCCCCEEESSHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHcCCCCeEEEEEeeCCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHHhh
Confidence 567999999999999988899998754 67999999999999999999999999999999999999999754
No 10
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.67 E-value=1.3e-16 Score=158.69 Aligned_cols=115 Identities=19% Similarity=0.120 Sum_probs=89.7
Q ss_pred ceEEEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC------Cccchh
Q 002166 256 TSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG------SRKSLF 329 (957)
Q Consensus 256 ~~~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg------~~KsL~ 329 (957)
..+|+++|||+++ ||+ .++++|||.|||++.+.||..|++.|||.+ +|. . ++++++. ..|.|+
T Consensus 50 ~~~~v~~rPg~~e---fL~-~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~-~f~-----~-~~~rd~~~~~k~~~~k~L~ 118 (181)
T 2ght_A 50 HQVYVLKRPHVDE---FLQ-RMGELFECVLFTASLAKYADPVADLLDKWG-AFR-----A-RLFRESCVFHRGNYVKDLS 118 (181)
T ss_dssp EEEEEEECTTHHH---HHH-HHHHHSEEEEECSSCHHHHHHHHHHHCTTC-CEE-----E-EECGGGSEEETTEEECCGG
T ss_pred EEEEEEeCCCHHH---HHH-HHHhCCCEEEEcCCCHHHHHHHHHHHCCCC-cEE-----E-EEeccCceecCCcEeccHH
Confidence 3589999999999 887 778889999999999999999999999997 787 4 4556543 458888
Q ss_pred hhccCCCCCCcEEEEEcCCcccCCCCCCCCeEEeccccCccCchhhhcccCchHHHHHHHHhhhc
Q 002166 330 NVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVR 394 (957)
Q Consensus 330 ~lfp~g~~~~~mvVIIDDR~dVW~~~~~~~v~vV~~Y~pf~~~q~e~~~~~p~L~~a~~vl~~Vh 394 (957)
.+. .+++.+|||||+...|..+..|.|. |.+|. ..+ .+..|...+.+|+.++
T Consensus 119 ~Lg----~~~~~~vivdDs~~~~~~~~~ngi~-i~~~~--~~~------~D~eL~~l~~~L~~l~ 170 (181)
T 2ght_A 119 RLG----RDLRRVLILDNSPASYVFHPDNAVP-VASWF--DNM------SDTELHDLLPFFEQLS 170 (181)
T ss_dssp GTC----SCGGGEEEECSCGGGGTTCTTSBCC-CCCCS--SCT------TCCHHHHHHHHHHHHT
T ss_pred HhC----CCcceEEEEeCCHHHhccCcCCEeE-ecccc--CCC------ChHHHHHHHHHHHHhC
Confidence 874 5789999999999999988656554 66663 211 2235777777777765
No 11
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=99.67 E-value=1.3e-16 Score=138.42 Aligned_cols=67 Identities=22% Similarity=0.206 Sum_probs=61.8
Q ss_pred CCchHHHHHHHHhcCCC-eEEEEeee-cCCCceEEEEEEECCEEEEEeec-CCHHHHHHHHHHHHHHHHH
Q 002166 705 ETPSGVLQDIAMKCGTK-VEFRPALV-ASTELQFSIEAWFAGEKIGEGIG-RTRREAQRQAAEGSIKHLA 771 (957)
Q Consensus 705 ~n~KS~LQE~~QK~~~~-~~Y~~v~~-~~Hdk~FtveV~I~G~~~GeG~G-kSKKEAEq~AAk~AL~~L~ 771 (957)
.+|||.||||||+.+.. ++|+++.+ ++|++.|+++|+|+|+.+|+|.| +|||+|||+||+.||+.|.
T Consensus 3 ~d~Kt~LqE~~q~~~~~~p~Y~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~~sKK~Aeq~AA~~al~~L~ 72 (73)
T 3adg_A 3 HVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELA 72 (73)
T ss_dssp CSHHHHHHHHHHHTTCCCCEEEEEEESSTTSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHcCCCCCEEEEEeECCCCCCeEEEEEEECCEEEEeeeccCCHHHHHHHHHHHHHHHhh
Confidence 47999999999999865 79998865 67999999999999999999999 9999999999999999884
No 12
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA binding protein; 2.14A {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=143.35 Aligned_cols=69 Identities=22% Similarity=0.354 Sum_probs=58.7
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
...+|||.||||||+++..++|+++.+ ++|+++|+++|+|+|+ +|+|.|+|||+|||+||+.||+.|..
T Consensus 12 ~~kd~Ks~LqE~~q~~~~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~aL~~L~~ 82 (90)
T 3llh_A 12 PGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDT-SCTGQGPSKKAAKHKAAEVALKHLKG 82 (90)
T ss_dssp -CCCHHHHHHHHHHHTTCCCEEEEEEEC-----CCEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC-
T ss_pred cCCCHHHHHHHHHHhcCCCCEEEEEEeECCCCCCcEEEEEEECCE-EEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 456899999999999988899998754 6799999999999998 79999999999999999999999965
No 13
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA complex, protein-RNA interactions, RNA-bining protein; 1.90A {Xenopus laevis} SCOP: d.50.1.1
Probab=99.66 E-value=1.5e-16 Score=136.39 Aligned_cols=65 Identities=26% Similarity=0.402 Sum_probs=59.6
Q ss_pred CchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002166 706 TPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 771 (957)
Q Consensus 706 n~KS~LQE~~QK~~~~-~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~ 771 (957)
.||+.||||||+.+.. ++|+++.+ ++|++.|+++|.|+|. +|.|.|+|||+|||.||+.||+.|.
T Consensus 1 ~p~s~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~-~~~G~G~sKK~Aeq~AA~~al~~L~ 68 (69)
T 1di2_A 1 MPVGSLQELAVQKGWRLPEYTVAQESGPPHKREFTITCRVETF-VETGSGTSKQVAKRVAAEKLLTKFK 68 (69)
T ss_dssp CHHHHHHHHHHHHTCCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEeecCCHHHHHHHHHHHHHHHHh
Confidence 3799999999999865 79998764 5799999999999998 9999999999999999999999885
No 14
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain, DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.66 E-value=4e-16 Score=141.02 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=65.2
Q ss_pred CccCCCCCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 698 GRDVSSTETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 698 ~~~~~~~~n~KS~LQE~~QK~~~~-~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
++......+||+.||||||+++.. ++|+++.+ ++|+++|+++|+|+|+ +|+|.|+|||+|||+||+.||+.|..
T Consensus 9 ~~~~~~~~d~Kt~LqE~~Qk~~~~~P~Y~~~~~~Gp~h~~~F~~~v~i~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 85 (89)
T 2cpn_A 9 VSPQQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVSG 85 (89)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHTCCCCEEEEEEEECCSSSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCCCCHHHHHHHHHHHcCCCCCeEEEEeeECCCCCCeEEEEEEECCE-EEEeeeCCHHHHHHHHHHHHHHHHHh
Confidence 334445678999999999998875 79998764 6799999999999998 99999999999999999999999964
No 15
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing, gene regulation-RNA complex; 2.20A {Homo sapiens}
Probab=99.65 E-value=4.2e-16 Score=140.69 Aligned_cols=68 Identities=19% Similarity=0.299 Sum_probs=62.1
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 704 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~-~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
..+|||.||||||+.+.. ++|+++.+ ++|++.|+++|+|+|+ +|+|.|+|||+|||+||+.||+.|..
T Consensus 14 ~~d~Ks~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 84 (88)
T 3adl_A 14 GSHEVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVHT 84 (88)
T ss_dssp TCCHHHHHHHHHHHTTCCCCEEEEEEEESCTTSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHHc
Confidence 458999999999999865 79998764 6799999999999998 99999999999999999999999964
No 16
>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.65 E-value=3.7e-16 Score=140.87 Aligned_cols=70 Identities=21% Similarity=0.250 Sum_probs=62.8
Q ss_pred CCCchHHHHHHHHhcCCCeEEEEeeecCCCc-eEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 704 TETPSGVLQDIAMKCGTKVEFRPALVASTEL-QFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~~~Y~~v~~~~Hdk-~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
..+||+.||||||+++..++|+....++|++ +|+++|+|+|+.+|.|.|+|||+|||+||+.||+.|...
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~~Y~~~~Gp~H~~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 75 (88)
T 1x48_A 5 SSGYIGLVNSFAQKKKLSVNYEQCEPNSELPQRFICKCKIGQTMYGTGSGVTKQEAKQLAAKEAYQKLLKS 75 (88)
T ss_dssp SSCHHHHHHHHHHHTTCCEEEEECCCSSSSSCCEEEEEEESSCEEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHcCCCCeeEEeeCCCCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhc
Confidence 3579999999999999888999333378999 799999999999999999999999999999999999763
No 17
>1t4n_A Ribonuclease III; DSRBD, RNA-binding, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.50.1.1
Probab=99.64 E-value=1.2e-16 Score=146.31 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=61.3
Q ss_pred CCchHHHHHHHHhcCCCeEEEEeee-cCCCceEEEEEEECCE-EEEEeecCCHHHHHHHHHHHHHHHHH
Q 002166 705 ETPSGVLQDIAMKCGTKVEFRPALV-ASTELQFSIEAWFAGE-KIGEGIGRTRREAQRQAAEGSIKHLA 771 (957)
Q Consensus 705 ~n~KS~LQE~~QK~~~~~~Y~~v~~-~~Hdk~FtveV~I~G~-~~GeG~GkSKKEAEq~AAk~AL~~L~ 771 (957)
.+|||.||||+|+.+..++|+++.+ ++|+++|+|+|+|+|+ .+|.|.|+|||+|||+||+.||+.|.
T Consensus 6 ~D~KT~LQE~~Q~~~~~p~Y~v~~~GpdH~k~F~v~v~i~~~~~~g~G~G~SKK~AEQ~AA~~AL~~l~ 74 (94)
T 1t4n_A 6 MNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKK 74 (94)
T ss_dssp HHHHHHHHHHTCSSSSCCEEEECCCCSSSCCSEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHCHH
T ss_pred CCchHHHHHHHcCCCCCCEEEEeeeCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 3689999999999866789999754 6799999999999999 99999999999999999999999885
No 18
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.64 E-value=5.5e-16 Score=140.11 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=61.8
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 704 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~-~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
..+||+.||||||+.+.. ++|+++.+ ++|++.|+++|+|+|+ +|+|.|+|||+|||+||+.||+.|..
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 75 (89)
T 1uhz_A 5 SSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNE-VATGTGPNKKIAKKNAAEAMLLQLGY 75 (89)
T ss_dssp SSCHHHHHHHHHHHTTSCCCEEEEEEEESCSTTCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEEEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHhc
Confidence 347999999999999865 79998764 6799999999999996 99999999999999999999999964
No 19
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=99.64 E-value=1e-16 Score=139.99 Aligned_cols=68 Identities=19% Similarity=0.319 Sum_probs=62.2
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 771 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~ 771 (957)
...+|||.||||||+.+..++|+++.+ ++|++.|+++|+|+| .+|+|.|+|||+|||.||+.||+.|.
T Consensus 5 ~~~d~ks~LqE~~q~~~~~p~Y~~~~~~Gp~h~~~F~~~v~i~~-~~~~G~G~sKK~Aeq~AA~~aL~~L~ 74 (76)
T 1ekz_A 5 DKKSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFITACIVGS-IVTEGEGNGKKVSKKRAAEKMLVELQ 74 (76)
T ss_dssp CCSCHHHHHHHHHHHTTCCCEEEESSSCCSSSCSCSSEEEEETT-EEEEECCCSTTSSSHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEEeECCCCCCcEEEEEEECC-EEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 345899999999999987799998754 679999999999999 99999999999999999999999885
No 20
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.64 E-value=3.8e-16 Score=157.80 Aligned_cols=116 Identities=18% Similarity=0.108 Sum_probs=89.7
Q ss_pred ceEEEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC------Cccchh
Q 002166 256 TSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG------SRKSLF 329 (957)
Q Consensus 256 ~~~~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg------~~KsL~ 329 (957)
..+++++|||+.+ ||+ .++++|||.|||++.+.||+.|++.|||.+ +|. .++++++. ..|.|+
T Consensus 63 ~~~~v~~RPgv~e---fL~-~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~-~f~------~~l~rd~~~~~k~~~lK~L~ 131 (195)
T 2hhl_A 63 HQVYVLKRPHVDE---FLQ-RMGQLFECVLFTASLAKYADPVADLLDRWG-VFR------ARLFRESCVFHRGNYVKDLS 131 (195)
T ss_dssp EEEEEEECTTHHH---HHH-HHHHHSEEEEECSSCHHHHHHHHHHHCCSS-CEE------EEECGGGCEEETTEEECCGG
T ss_pred eeEEEEeCcCHHH---HHH-HHHcCCeEEEEcCCCHHHHHHHHHHhCCcc-cEE------EEEEcccceecCCceeeeHh
Confidence 4689999999999 777 677789999999999999999999999997 777 34566543 358888
Q ss_pred hhccCCCCCCcEEEEEcCCcccCCCCCCCCeEEeccccCccCchhhhcccCchHHHHHHHHhhhcc
Q 002166 330 NVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVRG 395 (957)
Q Consensus 330 ~lfp~g~~~~~mvVIIDDR~dVW~~~~~~~v~vV~~Y~pf~~~q~e~~~~~p~L~~a~~vl~~Vh~ 395 (957)
.+- .+++.+|||||+...|.....|.| .|.+|. .. ..+-.|...+.+|+.++.
T Consensus 132 ~Lg----~~~~~~vivDDs~~~~~~~~~ngi-~i~~~~--~~------~~D~eL~~L~~~L~~l~~ 184 (195)
T 2hhl_A 132 RLG----RELSKVIIVDNSPASYIFHPENAV-PVQSWF--DD------MTDTELLDLIPFFEGLSR 184 (195)
T ss_dssp GSS----SCGGGEEEEESCGGGGTTCGGGEE-ECCCCS--SC------TTCCHHHHHHHHHHHHHC
T ss_pred HhC----CChhHEEEEECCHHHhhhCccCcc-EEeeec--CC------CChHHHHHHHHHHHHHHh
Confidence 774 578999999999999988755554 565553 11 122357777888887754
No 21
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}
Probab=99.64 E-value=1.6e-16 Score=142.52 Aligned_cols=69 Identities=20% Similarity=0.348 Sum_probs=61.0
Q ss_pred CCchHHHHHHHHhc-----C-CCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 705 ETPSGVLQDIAMKC-----G-TKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 705 ~n~KS~LQE~~QK~-----~-~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
.+|||.||||||++ + ..++|+++.+ ++|+++|+++|+|+|+.+|+|.|+|||+|||+||+.||+.|...
T Consensus 1 ~d~Kt~LQE~~Q~~~~~~~~~~~p~Y~~~~~~Gp~H~~~F~v~V~v~g~~~~~G~G~SKK~AEq~AA~~AL~~L~~~ 77 (85)
T 2khx_A 1 NDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFP 77 (85)
T ss_dssp CCSCHHHHHHHHHCCCSSSCCCCCCEEECCCCCSSSCCCEEEEEEETTEECCCEEESSHHHHHHHHHHHHHTTCCSS
T ss_pred CCHHHHHHHHHhhhhhhcCCCCCceEEEEEeECCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhHh
Confidence 36999999999984 3 3579999764 57999999999999999999999999999999999999988543
No 22
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.63 E-value=1.1e-15 Score=140.34 Aligned_cols=71 Identities=13% Similarity=0.165 Sum_probs=64.2
Q ss_pred CCCCchHHHHHHHHhcCCC-eEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 703 STETPSGVLQDIAMKCGTK-VEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~-~~Y~~v~~~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
...+||+.||||||+++.. ++|+++.+.+.++.|+++|+|+|+.+|.|.|+|||+|||+||+.||+.|...
T Consensus 14 ~~kd~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~~~F~~~V~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 85 (98)
T 1x47_A 14 NGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPD 85 (98)
T ss_dssp TCCCHHHHHHHHHHHHTCSCCEEEEEECSSSSCCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHCSS
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEEeECCCCcEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHhh
Confidence 5678999999999999865 7999987666559999999999999999999999999999999999999643
No 23
>2l2n_A Hyponastic leave 1; DSRBD, miRNA, RNA binding protein, plant protein; NMR {Arabidopsis thaliana}
Probab=99.63 E-value=6.7e-16 Score=142.95 Aligned_cols=74 Identities=23% Similarity=0.200 Sum_probs=62.3
Q ss_pred cCCCCCCchHHHHHHHHhcCCC-eEEEEeee-cCCCceEEEEEEECCEEEEEeec-CCHHHHHHHHHHHHHHHHHhh
Q 002166 700 DVSSTETPSGVLQDIAMKCGTK-VEFRPALV-ASTELQFSIEAWFAGEKIGEGIG-RTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 700 ~~~~~~n~KS~LQE~~QK~~~~-~~Y~~v~~-~~Hdk~FtveV~I~G~~~GeG~G-kSKKEAEq~AAk~AL~~L~~~ 773 (957)
......+|||.||||||+++.. ++|+++.+ ++|++.|+++|+|+|+.+|.|.| +|||+|||+||+.||+.|...
T Consensus 12 ~~~~~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~Gp~H~~~F~~~V~v~g~~~~~G~G~~SKK~Aeq~AA~~AL~~L~~~ 88 (103)
T 2l2n_A 12 GVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAKS 88 (103)
T ss_dssp -------CTTHHHHHHHHTTCCCCEEEEEEESCSSSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHcCCCCCeEEEEeEcCCCCCeEEEEEEECCEEEEEeecCCCHHHHHHHHHHHHHHHHhcc
Confidence 3445668999999999999875 79999865 67999999999999999999999 999999999999999999753
No 24
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs6_A
Probab=99.61 E-value=1e-15 Score=140.95 Aligned_cols=71 Identities=18% Similarity=0.203 Sum_probs=62.8
Q ss_pred CCCchHHHHHHHHhcCCCeEEEEeee-cCCCceEEEEEEECC-EEEEEeecCCHHHHHHHHHHHHHHHHHhhh
Q 002166 704 TETPSGVLQDIAMKCGTKVEFRPALV-ASTELQFSIEAWFAG-EKIGEGIGRTRREAQRQAAEGSIKHLANVY 774 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~~~Y~~v~~-~~Hdk~FtveV~I~G-~~~GeG~GkSKKEAEq~AAk~AL~~L~~~~ 774 (957)
..+|||.||||||++...++|++... ++|+++|+++|+|+| +.+|+|.|+|||+|||+||+.||+.|....
T Consensus 5 ~~d~Kt~LqE~~Qk~~~~P~Y~~~~~Gp~H~~~F~~~V~v~g~~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~ 77 (99)
T 1whq_A 5 SSGIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSNAARDFVNYLVRIN 77 (99)
T ss_dssp CCSSHHHHHHHHHHTTCCCEEEEEEEECSSSEEEEEEEECTTCSCCEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCCeEEEeeecCCCCCeEEEEEEECCeEEEEEeccCCHHHHHHHHHHHHHHHHHhhC
Confidence 34799999999999955689998322 679999999999999 799999999999999999999999997643
No 25
>2b7t_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l3c_A
Probab=99.61 E-value=1.2e-15 Score=132.37 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=59.7
Q ss_pred CCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 705 ETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 705 ~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
.+|||.||||||+ ...++|+++.+ ++|+++|+++|.|+|+.+ +|.|+|||+|||+||+.||+.|.+
T Consensus 4 ~d~Ks~Lqe~~q~-~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 71 (73)
T 2b7t_A 4 VLPKNALMQLNEI-KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQ 71 (73)
T ss_dssp SSSHHHHHHHHHH-CSCCEEEEEEEECSSSSCEEEEEEESSSSEE-EEEESSHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcC-CCCceEEEEEeeCCCCCCeEEEEEEECCEEE-EeecCCHHHHHHHHHHHHHHHHhc
Confidence 4799999999996 55689998764 679999999999999997 999999999999999999999864
No 26
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=99.60 E-value=7.9e-16 Score=134.67 Aligned_cols=72 Identities=18% Similarity=0.112 Sum_probs=65.0
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
.+||++.||||||+.++..+.|.. +..+|++|.+.|++.|.|+|+.||.|.|+|||+|||.||+.||..|..
T Consensus 3 ~~n~Kt~LqE~~q~~~~~~p~Y~~-~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~ 74 (76)
T 3adj_A 3 HGLCKNLLQEYAQKMNYAIPLYQC-QKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQS 74 (76)
T ss_dssp CHHHHHHHHHHHHTTTCCCCEEEE-EEEECSSSCEEEEEEEEETTEEEECCCBSSHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEE-eeccCCCCCCcEEEEEEECCEEEEEeccCCHHHHHHHHHHHHHHHHhh
Confidence 369999999999999998766654 345899999999999999999999999999999999999999999964
No 27
>1t4o_A Ribonuclease III; RNT1P, DSRBD, RNA-binding, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: d.50.1.1 PDB: 1t4l_B 2lbs_B
Probab=99.60 E-value=9.7e-16 Score=145.25 Aligned_cols=71 Identities=15% Similarity=0.252 Sum_probs=63.1
Q ss_pred CCchHHHHHHHHhcCCCeEEEEeee-cCCCceEEEEEEECCE-EEEEeecCCHHHHHHHHHHHHHHHHH--hhhh
Q 002166 705 ETPSGVLQDIAMKCGTKVEFRPALV-ASTELQFSIEAWFAGE-KIGEGIGRTRREAQRQAAEGSIKHLA--NVYM 775 (957)
Q Consensus 705 ~n~KS~LQE~~QK~~~~~~Y~~v~~-~~Hdk~FtveV~I~G~-~~GeG~GkSKKEAEq~AAk~AL~~L~--~~~~ 775 (957)
.+|||.||||+|+.+..+.|+++.+ ++|++.|+|+|+|+|+ .+|.|.|+|||+|||+||+.||+.+. .+|.
T Consensus 8 ~D~KT~LQE~~Q~~~~~P~Y~vv~~GPdH~k~F~v~V~i~g~~~~g~G~G~SKK~AEQ~AA~~AL~~l~~l~Ky~ 82 (117)
T 1t4o_A 8 MNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKMLDFYA 82 (117)
T ss_dssp TTHHHHHHHHHCCGGGCCEEEEEECCCSSCCCEEEEEECTTCCEEEEEEESSHHHHHHHHHHHHHHCHHHHHHHT
T ss_pred CCchHHHHHHHcCCCCCCEEEEeeeCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999666689998765 6799999999999999 99999999999999999999998775 3554
No 28
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain, DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.59 E-value=2.4e-15 Score=135.98 Aligned_cols=76 Identities=20% Similarity=0.204 Sum_probs=66.8
Q ss_pred CCCCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 833 SKKLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 833 s~~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
+....||++.||||||+.++..+.|.. +..+|++|.+.|++.|.|+|+ ++.|.|+|||+|||+||+.||..|.+.+
T Consensus 12 ~~~~~d~Kt~LqE~~Qk~~~~~P~Y~~-~~~~Gp~h~~~F~~~v~i~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~~s 87 (89)
T 2cpn_A 12 QQSECNPVGALQELVVQKGWRLPEYTV-TQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVSGPS 87 (89)
T ss_dssp CCCCCCHHHHHHHHHHHHTCCCCEEEE-EEEECCSSSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCHHHHHHHHHHHcCCCCCeEEE-EeeECCCCCCeEEEEEEECCE-EEEeeeCCHHHHHHHHHHHHHHHHHhhc
Confidence 345679999999999999998665553 345899999999999999998 9999999999999999999999997543
No 29
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA complex, protein-RNA interactions, RNA-bining protein; 1.90A {Xenopus laevis} SCOP: d.50.1.1
Probab=99.59 E-value=1.2e-15 Score=130.81 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=61.5
Q ss_pred hhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 839 SVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 839 pVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
||+.||||||+.++..+.|.. +..+|++|.+.|++.|.|+|+ +|.|.|+|||+|||.||+.||..|.+
T Consensus 2 p~s~LqE~~q~~~~~~p~Y~~-~~~~Gp~h~~~F~~~v~v~~~-~~~G~G~sKK~Aeq~AA~~al~~L~~ 69 (69)
T 1di2_A 2 PVGSLQELAVQKGWRLPEYTV-AQESGPPHKREFTITCRVETF-VETGSGTSKQVAKRVAAEKLLTKFKT 69 (69)
T ss_dssp HHHHHHHHHHHHTCCCCEEEE-EEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCCCCEEEE-EEeECCCCCCeEEEEEEECCE-EEEeecCCHHHHHHHHHHHHHHHHhC
Confidence 899999999999998766654 345899999999999999998 99999999999999999999999863
No 30
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing, gene regulation-RNA complex; 2.20A {Homo sapiens}
Probab=99.57 E-value=2.8e-15 Score=135.33 Aligned_cols=74 Identities=20% Similarity=0.217 Sum_probs=64.8
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
...||++.||||||+.++..+.|.. +..+|++|.+.|++.|.|+|+ ++.|+|+|||+|||+||+.||..|..+.
T Consensus 13 ~~~d~Ks~LqE~~Q~~~~~~P~Y~~-~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~~p 86 (88)
T 3adl_A 13 RGSHEVGALQELVVQKGWRLPEYTV-TQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVHTVP 86 (88)
T ss_dssp TTCCHHHHHHHHHHHTTCCCCEEEE-EEEESCTTSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHHcCCCCCEEEE-EEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHHccC
Confidence 4569999999999999998666654 345899999999999999998 9999999999999999999999997654
No 31
>2l33_A Interleukin enhancer-binding factor 3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, DRBM; NMR {Homo sapiens}
Probab=99.57 E-value=6.5e-15 Score=134.05 Aligned_cols=69 Identities=19% Similarity=0.258 Sum_probs=62.4
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
....+|+.||||||+++ .++|+++.+ ++|+++|+++|+|+|+.+ .|.|+|||+|||+||+.||+.|...
T Consensus 12 ~~~~~K~~LqEl~Qk~~-~p~Y~~v~~~Gp~H~~~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~~ 82 (91)
T 2l33_A 12 LTKHGKNPVMELNEKRR-GLKYELISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFPD 82 (91)
T ss_dssp CCSSTTCHHHHHHHHCS-SCEEEEEEEEECSSCEEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred hccCCCCHHHHHHHhCC-CCeEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHhhc
Confidence 44579999999999998 889998764 689999999999999997 9999999999999999999999643
No 32
>1whn_A Hypothetical protein riken cDNA 2310016K04; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.57 E-value=3.3e-15 Score=143.54 Aligned_cols=69 Identities=13% Similarity=0.086 Sum_probs=63.7
Q ss_pred CCCCchHHHHHHHHhcCCC-eEEEEeeecCCCceEEEEEEECCEEEEEeec-CCHHHHHHHHHHHHHHHHHh
Q 002166 703 STETPSGVLQDIAMKCGTK-VEFRPALVASTELQFSIEAWFAGEKIGEGIG-RTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~-~~Y~~v~~~~Hdk~FtveV~I~G~~~GeG~G-kSKKEAEq~AAk~AL~~L~~ 772 (957)
...+|||.||||||+.+.. ++|+++.+ +|++.|+++|+|+|+.||.|.| +|||+|||+||+.||+.|..
T Consensus 24 ~~~d~Kt~LQE~~Qk~~~~~P~Y~~v~~-~H~~~F~v~V~v~g~~~g~G~G~~SKK~AEQ~AA~~AL~~L~~ 94 (128)
T 1whn_A 24 PQITPKMCLLEWCRREKLPQPVYETVQR-TIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLRSQGL 94 (128)
T ss_dssp TTCCHHHHHHHHHHHTTCCCCCCCEEEC-SSSCCEEEEEEETTEEEEESSCBSSHHHHHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHcCCCCCeEEEEee-cCCCcEEEEEEECCEEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 4568999999999999864 69999877 9999999999999999999999 99999999999999999953
No 33
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.57 E-value=5e-15 Score=135.69 Aligned_cols=67 Identities=10% Similarity=0.141 Sum_probs=60.8
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 771 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~ 771 (957)
...+||+.||||||+. ..++|+++.+ ++|+++|+++|+|+|+.+ .|.|+|||+|||+||+.||+.|.
T Consensus 14 ~~~d~Kt~LqE~~Q~~-~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~aL~~L~ 82 (97)
T 2dmy_A 14 KAIDLMNALMRLNQIR-PGLQYKLLSQSGPVHAPVFTMSVDVDGTTY-EASGPSKKTAKLHVAVKVLQAMG 82 (97)
T ss_dssp CSSSCTHHHHHHHHHS-CSCCCEEEEEESCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhcC-CCceEEEEEeeCCCCCCeEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHhC
Confidence 3468999999999996 5689998764 689999999999999998 99999999999999999999994
No 34
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=99.57 E-value=3.8e-15 Score=129.15 Aligned_cols=69 Identities=23% Similarity=0.110 Sum_probs=63.1
Q ss_pred CChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeeccc-CCHHHHHHHHHHHHHHHHh
Q 002166 837 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIG-STWDEAKMQAAEKALGSLR 907 (957)
Q Consensus 837 ~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G-~SKKeAKqqAAk~AL~sL~ 907 (957)
.||++.||||||+.++..+.|.. +. .|++|.+.|++.|.|+|+.||.|.| +|||+|||.||+.||..|.
T Consensus 3 ~d~Kt~LqE~~q~~~~~~p~Y~~-~~-~Gp~h~~~F~~~v~v~g~~~~~G~G~~sKK~Aeq~AA~~al~~L~ 72 (73)
T 3adg_A 3 HVFKSRLQEYAQKYKLPTPVYEI-VK-EGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELA 72 (73)
T ss_dssp CSHHHHHHHHHHHTTCCCCEEEE-EE-ESSTTSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHcCCCCCEEEE-Ee-ECCCCCCeEEEEEEECCEEEEeeeccCCHHHHHHHHHHHHHHHhh
Confidence 59999999999999998776764 33 5999999999999999999999999 9999999999999999884
No 35
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}
Probab=99.57 E-value=2.5e-15 Score=134.78 Aligned_cols=73 Identities=21% Similarity=0.259 Sum_probs=63.2
Q ss_pred CChhHHHHHHhhh-----cCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 837 MGSVSALKELCMT-----EGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 837 ~NpVglLNELcqk-----eGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
.||++.||||||+ .++..+.|.. +.++|++|.+.|++.|.|+|+.||.|+|+|||+|+|+||+.||..|....
T Consensus 1 ~d~Kt~LQE~~Q~~~~~~~~~~~p~Y~~-~~~~Gp~H~~~F~v~V~v~g~~~~~G~G~SKK~AEq~AA~~AL~~L~~~~ 78 (85)
T 2khx_A 1 NDPKSQLQQCCLTLRTEGKEPDIPLYKT-LQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQ 78 (85)
T ss_dssp CCSCHHHHHHHHHCCCSSSCCCCCCEEE-CCCCCSSSCCCEEEEEEETTEECCCEEESSHHHHHHHHHHHHHTTCCSSC
T ss_pred CCHHHHHHHHHhhhhhhcCCCCCceEEE-EEeECCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhHhh
Confidence 4899999999997 3555555554 45689999999999999999999999999999999999999999886543
No 36
>1uil_A Double-stranded RNA-binding motif; structural genomics, DSRM, riken structural genomics/proteomics initiative, RSGI RNA binding protein; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs7_A
Probab=99.56 E-value=6.1e-15 Score=138.77 Aligned_cols=70 Identities=16% Similarity=0.170 Sum_probs=62.5
Q ss_pred CCCchHHHHHHHHhcCCCeEEEEeee-cCCCceEEEEEEE-----CCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 704 TETPSGVLQDIAMKCGTKVEFRPALV-ASTELQFSIEAWF-----AGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~~~Y~~v~~-~~Hdk~FtveV~I-----~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
..+||+.||||||+++..++|++... ++|+++|+++|+| +|+.+|.|.|+|||+|||+||+.||+.|...
T Consensus 25 ~~d~Kt~LqE~~Qk~~~~p~Y~~~~~Gp~H~~~F~~~V~v~~~~~~~~~~~~G~G~SKK~AEq~AA~~AL~~L~~~ 100 (113)
T 1uil_A 25 LENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHL 100 (113)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCEEEEESCSTTCEEEEEEEEEETTTTEEEEEECCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHCCCCCeEEEeeECCCCCCcEEEEEEEeeeccCCEEEEEEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 45899999999999988789994322 6899999999999 6899999999999999999999999999764
No 37
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.56 E-value=3.2e-15 Score=137.14 Aligned_cols=75 Identities=19% Similarity=0.172 Sum_probs=66.2
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhccC
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMFG 911 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~~ 911 (957)
...||++.||||||+.++...|.. +...|++|.+.|++.|.|+|+.|+.|.|+|||+|||+||+.||..|.....
T Consensus 12 ~~~n~Kt~LqE~~Q~~~~~p~Y~~--~~~~Gp~H~~~F~v~v~i~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~~ 86 (97)
T 1x49_A 12 TPGFYMDKLNKYRQMHGVAITYKE--LSTSGPPHDRRFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAVDILDNENK 86 (97)
T ss_dssp CTTHHHHHHHHHHHHHTCCEEEEE--EEEESCSSSCEEEEEEEESSCCCCCEEESSHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHHHHHcCCCCeEEE--EEeeCCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHHhhcC
Confidence 557999999999999999865443 245899999999999999999999999999999999999999999975443
No 38
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=99.56 E-value=2.2e-15 Score=131.62 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=63.5
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
..||++.||||||+.++. +.|.. +..+|++|.+.|++.|.|+| .+|.|.|+|||+|||.||+.||..|..
T Consensus 6 ~~d~ks~LqE~~q~~~~~-p~Y~~-~~~~Gp~h~~~F~~~v~i~~-~~~~G~G~sKK~Aeq~AA~~aL~~L~~ 75 (76)
T 1ekz_A 6 KKSPISQVHEIGIKRNMT-VHFKV-LREEGPAHMKNFITACIVGS-IVTEGEGNGKKVSKKRAAEKMLVELQK 75 (76)
T ss_dssp CSCHHHHHHHHHHHTTCC-CEEEE-SSSCCSSSCSCSSEEEEETT-EEEEECCCSTTSSSHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHcCCC-CEEEE-EEeECCCCCCcEEEEEEECC-EEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 469999999999999999 55554 45689999999999999999 899999999999999999999999864
No 39
>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.55 E-value=2.1e-14 Score=129.46 Aligned_cols=70 Identities=23% Similarity=0.295 Sum_probs=64.1
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCc-cEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhc
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKD-EVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~k-eF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~ 909 (957)
..||++.||||||+.++...|. . .+|++|.+ .|++.|.|+|+.|+.|.|+|||+|+|+||+.||..|...
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~~Y~-~---~~Gp~H~~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 75 (88)
T 1x48_A 5 SSGYIGLVNSFAQKKKLSVNYE-Q---CEPNSELPQRFICKCKIGQTMYGTGSGVTKQEAKQLAAKEAYQKLLKS 75 (88)
T ss_dssp SSCHHHHHHHHHHHTTCCEEEE-E---CCCSSSSSCCEEEEEEESSCEEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHcCCCCeeE-E---eeCCCCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhc
Confidence 4599999999999999988555 3 48999999 699999999999999999999999999999999999864
No 40
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.55 E-value=6.2e-15 Score=133.24 Aligned_cols=72 Identities=22% Similarity=0.154 Sum_probs=63.9
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
...||++.||||||+.++..+.|.. +..+|++|.+.|++.|.|+|+ ++.|.|+|||+|||+||+.||..|..
T Consensus 4 ~~~d~Kt~LqE~~Q~~~~~~P~Y~~-~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~ 75 (89)
T 1uhz_A 4 GSSGPISRLAQIQQARKEKEPDYIL-LSERGMPRRREFVMQVKVGNE-VATGTGPNKKIAKKNAAEAMLLQLGY 75 (89)
T ss_dssp SSSCHHHHHHHHHHHTTSCCCEEEE-EEEESCSTTCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHTS
T ss_pred CCCCHHHHHHHHHHHhCCCCCeEEE-EEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHhc
Confidence 3469999999999999998655553 345899999999999999997 99999999999999999999999963
No 41
>2ljh_A Double-stranded RNA-specific editase ADAR; DSRBD, DSRBM, editing, hydrolase; NMR {Drosophila melanogaster}
Probab=99.53 E-value=1.2e-14 Score=137.29 Aligned_cols=65 Identities=17% Similarity=0.304 Sum_probs=59.3
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
...+|||.||||||+ ++|+++.+ ++|+++|+++|+|+|+.+ +|.|+|||+|||+||+.||+.|..
T Consensus 35 ~~kd~Ks~LQE~~q~----p~Y~~v~~~Gp~H~k~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~ 101 (114)
T 2ljh_A 35 QPKNTVAMLNELRHG----LIYKLESQTGPVHAPLFTISVEVDGQKY-LGQGRSKKVARIEAAATALRSFIQ 101 (114)
T ss_dssp CCSCHHHHHHHHCSC----CEEEEEEEECCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHccC----CeEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHHc
Confidence 456899999999985 89998764 679999999999999999 999999999999999999999964
No 42
>2dix_A Interferon-inducible double stranded RNA- dependent protein kinase activator A; structure genomics, DSRM domain, hypothetical protein PRKRA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.53 E-value=1.1e-14 Score=129.95 Aligned_cols=73 Identities=19% Similarity=0.131 Sum_probs=62.9
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
...||++.||||||+.+... .|.. +..+|++|.+.|++.|.|+| .++.|.|+|||+|||+||+.||..|....
T Consensus 6 ~~~d~Ks~LqE~~q~~~~~p-~Y~~-~~~~Gp~h~~~F~~~v~v~~-~~~~G~G~SKK~Aeq~AA~~aL~~L~~~~ 78 (84)
T 2dix_A 6 SGKTPIQVLHEYGMKTKNIP-VYEC-ERSDVQIHVPTFTFRVTVGD-ITCTGEGTSKKLAKHRAAEAAINILKANA 78 (84)
T ss_dssp CCCCHHHHHHHHHHHTTCCC-EEEE-EEEECSSSSCEEEEEEEETT-EEEEECSSCTTHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHcCCCC-eEEE-EEeECCCCCCeEEEEEEECC-EEEEeeeCCHHHHHHHHHHHHHHHHhccc
Confidence 45799999999999998543 3432 24589999999999999999 89999999999999999999999998544
No 43
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l2k_B
Probab=99.51 E-value=4.2e-14 Score=122.02 Aligned_cols=66 Identities=21% Similarity=0.359 Sum_probs=58.4
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
...|||+.|||| ...++|+++.+ ++|++.|+++|+|+|+.+ +|.|+|||+|||+||+.||+.|...
T Consensus 2 ~~knp~s~L~E~----~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~SKK~Aeq~AA~~al~~L~~~ 69 (71)
T 2b7v_A 2 SGKNPVMILNEL----RPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFNL 69 (71)
T ss_dssp CSSCHHHHHHHH----CCSCEEEEEECCCCTTTCCEEEEEECSSCEE-EEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHh----CCCCEEEEEEeECCCCCceEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 357899999999 35689998765 579999999999999976 9999999999999999999999764
No 44
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs6_A
Probab=99.50 E-value=2.4e-14 Score=131.83 Aligned_cols=82 Identities=13% Similarity=0.106 Sum_probs=67.6
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECC-EEEeecccCCHHHHHHHHHHHHHHHHhhcc---C
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDG-QVLGKGIGSTWDEAKMQAAEKALGSLRSMF---G 911 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgG-kvyG~G~G~SKKeAKqqAAk~AL~sL~s~~---~ 911 (957)
..||++.||||||+. +..+.|.. ..+|++|.+.|++.|.|+| +.++.|.|+|||+|||+||+.||..|.... .
T Consensus 5 ~~d~Kt~LqE~~Qk~-~~~P~Y~~--~~~Gp~H~~~F~~~V~v~g~~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~~~~~ 81 (99)
T 1whq_A 5 SSGIKNFLYAWCGKR-KMTPAYEI--RAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSNAARDFVNYLVRINEVKS 81 (99)
T ss_dssp CCSSHHHHHHHHHHT-TCCCEEEE--EEEECSSSEEEEEEEECTTCSCCEEEEESSHHHHHHHHHHHHHHHHHHHTSSCT
T ss_pred CCCHHHHHHHHHHHC-CCCCeEEE--eeecCCCCCeEEEEEEECCeEEEEEeccCCHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 469999999999999 55555543 3579999999999999999 799999999999999999999999998543 2
Q ss_pred CCCccccCC
Q 002166 912 QFPQKHQGS 920 (957)
Q Consensus 912 ~~~pkrq~s 920 (957)
...|.|+.+
T Consensus 82 ~~~P~~~~~ 90 (99)
T 1whq_A 82 EEVPAVGIV 90 (99)
T ss_dssp TTSCCCCCC
T ss_pred ccCCCcCcC
Confidence 344555533
No 45
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=99.50 E-value=1.8e-14 Score=156.44 Aligned_cols=120 Identities=16% Similarity=0.193 Sum_probs=89.2
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCc-cccccccCeEE-------ec---cCC--Cc
Q 002166 259 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNL-INTKELLDRIV-------CV---KSG--SR 325 (957)
Q Consensus 259 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~l-Fg~~~l~~RIi-------sr---~sg--~~ 325 (957)
++.+|||+++ ||+ .+++.|||+|||++.+.||..|++.|||.+.+ |. .|++ +. +.| ..
T Consensus 162 ~~~~RP~l~e---FL~-~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~-----~~~~r~~~~~~~~~~~~~g~~~v 232 (320)
T 3shq_A 162 TELMRPYLHE---FLT-SAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYK-----VMFYLDSTAMISVHVPERGVVDV 232 (320)
T ss_dssp HHHBCTTHHH---HHH-HHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCC-----CCEEECGGGCEEEEETTTEEEEE
T ss_pred ceEeCCCHHH---HHH-HHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCccee-----EEEEEcCCccccccccCCCCEEE
Confidence 5678999999 998 88999999999999999999999999999886 55 3443 11 123 47
Q ss_pred cchhhh---ccCCCCCCcEEEEEcCCcccCCCCCCCCeEEeccccCccCchhhhcccCchHHHHHHHHhhhc
Q 002166 326 KSLFNV---FQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNIACNVR 394 (957)
Q Consensus 326 KsL~~l---fp~g~~~~~mvVIIDDR~dVW~~~~~~~v~vV~~Y~pf~~~q~e~~~~~p~L~~a~~vl~~Vh 394 (957)
|+|..| ||+ .+.+.+|||||+...|..+.+ |.+.|++|.. ...+ ...+..|.....+|..++
T Consensus 233 KdLs~Lw~~~p~--rdl~~tIiIDdsp~~~~~~p~-NgI~I~~~~~--~~~~--~~~D~eL~~L~~~L~~L~ 297 (320)
T 3shq_A 233 KPLGVIWALYKQ--YNSSNTIMFDDIRRNFLMNPK-SGLKIRPFRQ--AHLN--RGTDTELLKLSDYLRKIA 297 (320)
T ss_dssp CCHHHHHHHCTT--CCGGGEEEEESCGGGGTTSGG-GEEECCCCCC--HHHH--TTTCCHHHHHHHHHHHHH
T ss_pred EEhHHhhcccCC--CChhHEEEEeCChHHhccCcC-ceEEeCeEcC--CCCC--CCccHHHHHHHHHHHHHh
Confidence 999999 553 678999999999999998854 4556777632 1111 112335666667776665
No 46
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA binding protein; 2.14A {Homo sapiens}
Probab=99.49 E-value=3e-14 Score=128.73 Aligned_cols=73 Identities=22% Similarity=0.190 Sum_probs=56.5
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
...||++.||||||+.+....| .. +..+|++|.+.|++.|.|+|+ ++.|+|+|||+|||+||+.||..|....
T Consensus 12 ~~kd~Ks~LqE~~q~~~~~p~Y-~~-~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~aL~~L~~~~ 84 (90)
T 3llh_A 12 PGKTPISLLQEYGTRIGKTPVY-DL-LKAEGQAHQPNFTFRVTVGDT-SCTGQGPSKKAAKHKAAEVALKHLKGGS 84 (90)
T ss_dssp -CCCHHHHHHHHHHHTTCCCEE-EE-EEEC-----CCEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC---
T ss_pred cCCCHHHHHHHHHHhcCCCCEE-EE-EEeECCCCCCcEEEEEEECCE-EEEEEeCCHHHHHHHHHHHHHHHHHhcc
Confidence 5679999999999998875444 32 346899999999999999998 6899999999999999999999997543
No 47
>2l2n_A Hyponastic leave 1; DSRBD, miRNA, RNA binding protein, plant protein; NMR {Arabidopsis thaliana}
Probab=99.48 E-value=3.6e-14 Score=131.38 Aligned_cols=73 Identities=22% Similarity=0.100 Sum_probs=63.2
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeeccc-CCHHHHHHHHHHHHHHHHhhc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIG-STWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G-~SKKeAKqqAAk~AL~sL~s~ 909 (957)
...||++.||||||+.++..+.|.. +. .|++|.+.|++.|.|+|+.|+.|.| +|||+|||+||+.||..|...
T Consensus 15 ~~~d~Kt~LqE~~Q~~~~~~P~Y~~-~~-~Gp~H~~~F~~~V~v~g~~~~~G~G~~SKK~Aeq~AA~~AL~~L~~~ 88 (103)
T 2l2n_A 15 NCYVFKSRLQEYAQKYKLPTPVYEI-VK-EGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAKS 88 (103)
T ss_dssp ----CTTHHHHHHHHTTCCCCEEEE-EE-ESCSSSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEE-Ee-EcCCCCCeEEEEEEECCEEEEEeecCCCHHHHHHHHHHHHHHHHhcc
Confidence 4569999999999999999876764 33 5999999999999999999999999 999999999999999999753
No 48
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l2k_B
Probab=99.48 E-value=5.8e-14 Score=121.11 Aligned_cols=69 Identities=28% Similarity=0.328 Sum_probs=59.7
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
..+|||+.|||||. ...|.+.. .+|++|.+.|++.|.|+|+.| .|.|+|||+|||+||+.||..|.++.
T Consensus 2 ~~knp~s~L~E~~~--~p~Y~~~~----~~Gp~h~~~F~~~v~v~~~~~-~G~G~SKK~Aeq~AA~~al~~L~~~~ 70 (71)
T 2b7v_A 2 SGKNPVMILNELRP--GLKYDFLS----ESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFNLH 70 (71)
T ss_dssp CSSCHHHHHHHHCC--SCEEEEEE----CCCCTTTCCEEEEEECSSCEE-EEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHhCC--CCEEEEEE----eECCCCCceEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHHHhcc
Confidence 35799999999974 44555554 489999999999999999987 99999999999999999999998753
No 49
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.46 E-value=1.1e-13 Score=127.07 Aligned_cols=73 Identities=26% Similarity=0.148 Sum_probs=63.8
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
...||++.||||||+.++..+.|.. +..+|++ +.|++.|.|+|+.|+.|.|+|||+|||+||+.||..|....
T Consensus 14 ~~kd~Kt~LqE~~Q~~~~~~P~Y~~-~~~~Gp~--~~F~~~V~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~ 86 (98)
T 1x47_A 14 NGKSEVCILHEYMQRVLKVRPVYNF-FECENPS--EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDF 86 (98)
T ss_dssp TCCCHHHHHHHHHHHHTCSCCEEEE-EECSSSS--CCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHCSSS
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEE-EEeECCC--CcEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHhhh
Confidence 4569999999999999998766654 3457777 89999999999999999999999999999999999997443
No 50
>2b7t_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l3c_A
Probab=99.45 E-value=6.3e-14 Score=121.64 Aligned_cols=69 Identities=32% Similarity=0.287 Sum_probs=59.0
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
..||++.|+||||+ +..+.|.. +..+|++|.+.|++.|.|+|+.| .|+|+|||+|+|+||+.||..|..
T Consensus 3 ~~d~Ks~Lqe~~q~--~~~p~Y~~-~~~~Gp~h~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 71 (73)
T 2b7t_A 3 PVLPKNALMQLNEI--KPGLQYML-LSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQ 71 (73)
T ss_dssp SSSSHHHHHHHHHH--CSCCEEEE-EEEECSSSSCEEEEEEESSSSEE-EEEESSHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcC--CCCceEEE-EEeeCCCCCCeEEEEEEECCEEE-EeecCCHHHHHHHHHHHHHHHHhc
Confidence 46999999999996 33333432 23589999999999999999998 999999999999999999999974
No 51
>3p1x_A Interleukin enhancer-binding factor 3; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.90A {Homo sapiens}
Probab=99.43 E-value=2.6e-13 Score=118.79 Aligned_cols=64 Identities=19% Similarity=0.283 Sum_probs=54.6
Q ss_pred hHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 708 SGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 708 KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
|+-|+||+|++ ..+.|+++.+ ++|+++|+++|.|+|+.+ .|.|+|||+|||+||+.||+.|...
T Consensus 7 K~pl~~L~q~~-~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~~ 72 (75)
T 3p1x_A 7 KNPVMELNEKR-RGLKYELISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFPD 72 (75)
T ss_dssp CCHHHHHHHHS-TTCCEEEEEEESCTTSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHcC-CCCEEEEEEeeCCCCCceEEEEEEECCEEE-EEEECCHHHHHHHHHHHHHHHHHcc
Confidence 45555555554 4789999764 679999999999999999 9999999999999999999999764
No 52
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.42 E-value=1e-12 Score=120.34 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=59.1
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHh
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLR 907 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~ 907 (957)
...||++.|+||||+.. .+.|.. +..+|++|.+.|++.|.|+|+.| .|.|+|||+|+|+||+.||..|.
T Consensus 14 ~~~d~Kt~LqE~~Q~~~--~p~Y~~-~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~aL~~L~ 82 (97)
T 2dmy_A 14 KAIDLMNALMRLNQIRP--GLQYKL-LSQSGPVHAPVFTMSVDVDGTTY-EASGPSKKTAKLHVAVKVLQAMG 82 (97)
T ss_dssp CSSSCTHHHHHHHHHSC--SCCCEE-EEEESCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhcCC--CceEEE-EEeeCCCCCCeEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHhC
Confidence 55799999999999863 222322 23479999999999999999999 99999999999999999999995
No 53
>1uil_A Double-stranded RNA-binding motif; structural genomics, DSRM, riken structural genomics/proteomics initiative, RSGI RNA binding protein; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs7_A
Probab=99.41 E-value=1.4e-13 Score=129.47 Aligned_cols=71 Identities=14% Similarity=0.133 Sum_probs=63.0
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEE-----CCEEEeecccCCHHHHHHHHHHHHHHHHhhc
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEI-----DGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~I-----gGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~ 909 (957)
..||++.||||||+.++ .+.|.. ...|++|.+.|++.|.| +|+.|+.|.|+|||+|+|+||+.||..|...
T Consensus 25 ~~d~Kt~LqE~~Qk~~~-~p~Y~~--~~~Gp~H~~~F~~~V~v~~~~~~~~~~~~G~G~SKK~AEq~AA~~AL~~L~~~ 100 (113)
T 1uil_A 25 LENAKARLNQYFQKEKI-QGEYKY--TQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHL 100 (113)
T ss_dssp HHHHHHHHHHHHHHSCC-CCCCEE--EEESCSTTCEEEEEEEEEETTTTEEEEEECCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHCCC-CCeEEE--eeECCCCCCcEEEEEEEeeeccCCEEEEEEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 35899999999999999 444432 45899999999999999 6999999999999999999999999999865
No 54
>2ljh_A Double-stranded RNA-specific editase ADAR; DSRBD, DSRBM, editing, hydrolase; NMR {Drosophila melanogaster}
Probab=99.40 E-value=4.7e-13 Score=126.51 Aligned_cols=68 Identities=28% Similarity=0.310 Sum_probs=60.1
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~ 909 (957)
...||++.||||||+ ..|.+.. ++|++|.+.|+++|.|+|+.| .|.|+|||+|||+||+.||..|...
T Consensus 35 ~~kd~Ks~LQE~~q~--p~Y~~v~----~~Gp~H~k~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~~ 102 (114)
T 2ljh_A 35 QPKNTVAMLNELRHG--LIYKLES----QTGPVHAPLFTISVEVDGQKY-LGQGRSKKVARIEAAATALRSFIQF 102 (114)
T ss_dssp CCSCHHHHHHHHCSC--CEEEEEE----EECCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHccC--CeEEEEE----eeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHHcC
Confidence 456999999999994 5555544 389999999999999999999 9999999999999999999999753
No 55
>1whn_A Hypothetical protein riken cDNA 2310016K04; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.40 E-value=9.9e-13 Score=126.45 Aligned_cols=70 Identities=17% Similarity=0.047 Sum_probs=62.5
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeeccc-CCHHHHHHHHHHHHHHHHhh
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIG-STWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G-~SKKeAKqqAAk~AL~sL~s 908 (957)
...||++.||||||+.++..+.|.. +. . +|.+.|++.|.|+|+.|+.|.| +|||+|||+||+.||..|..
T Consensus 24 ~~~d~Kt~LQE~~Qk~~~~~P~Y~~-v~-~--~H~~~F~v~V~v~g~~~g~G~G~~SKK~AEQ~AA~~AL~~L~~ 94 (128)
T 1whn_A 24 PQITPKMCLLEWCRREKLPQPVYET-VQ-R--TIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLRSQGL 94 (128)
T ss_dssp TTCCHHHHHHHHHHHTTCCCCCCCE-EE-C--SSSCCEEEEEEETTEEEEESSCBSSHHHHHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHcCCCCCeEEE-Ee-e--cCCCcEEEEEEECCEEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 3569999999999999998876654 22 2 8999999999999999999999 99999999999999999963
No 56
>3p1x_A Interleukin enhancer-binding factor 3; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.90A {Homo sapiens}
Probab=99.37 E-value=1e-12 Score=115.11 Aligned_cols=67 Identities=30% Similarity=0.297 Sum_probs=59.2
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
..+||++.|+|++. ...|....+ +|++|.+.|++.|.|+|+.| .|+|+|||+|||+||+.||..|..
T Consensus 5 ~~K~pl~~L~q~~~--~p~Y~~~~~----~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 71 (75)
T 3p1x_A 5 HGKNPVMELNEKRR--GLKYELISE----TGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFP 71 (75)
T ss_dssp -CCCHHHHHHHHST--TCCEEEEEE----ESCTTSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHcCC--CCEEEEEEe----eCCCCCceEEEEEEECCEEE-EEEECCHHHHHHHHHHHHHHHHHc
Confidence 46799999999974 666666654 89999999999999999999 999999999999999999999964
No 57
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Probab=99.37 E-value=5.8e-13 Score=133.03 Aligned_cols=74 Identities=23% Similarity=0.201 Sum_probs=66.0
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
..+||++.||||||+.++...|.. +..+|++|.+.|++.|.|+|+.|+.|.|+|||+|||+||+.||..|....
T Consensus 11 ~~~n~ks~LqE~~q~~~~~p~Y~~--~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~~~ 84 (179)
T 1qu6_A 11 SAGFFMEELNTYRQKQGVVLKYQE--LPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEK 84 (179)
T ss_dssp SSCSHHHHHHHHHHHHTCCCEEEE--EESCBTTTBCCEEEEEESSSSCCCEEECCSSHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEE--eeccCCCCCCeEEEEEEECCEEEEecCCCCHHHHHHHHHHHHHHHHhccc
Confidence 457999999999999999865543 34689999999999999999999999999999999999999999998543
No 58
>2l33_A Interleukin enhancer-binding factor 3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, DRBM; NMR {Homo sapiens}
Probab=99.37 E-value=3.9e-13 Score=122.41 Aligned_cols=68 Identities=28% Similarity=0.279 Sum_probs=59.8
Q ss_pred CChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 837 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 837 ~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
.++++.|+||||+.+ ... |.. +.++|++|.+.|+++|.|+|+.| .|+|+|||+|||+||+.||..|..
T Consensus 14 ~~~K~~LqEl~Qk~~-~p~-Y~~-v~~~Gp~H~~~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~ 81 (91)
T 2l33_A 14 KHGKNPVMELNEKRR-GLK-YEL-ISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFP 81 (91)
T ss_dssp SSTTCHHHHHHHHCS-SCE-EEE-EEEEECSSCEEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCHHHHHHHhCC-CCe-EEE-EEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHhh
Confidence 489999999999988 444 433 34589999999999999999998 999999999999999999999963
No 59
>1t4n_A Ribonuclease III; DSRBD, RNA-binding, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.50.1.1
Probab=99.36 E-value=5e-13 Score=122.58 Aligned_cols=71 Identities=21% Similarity=0.236 Sum_probs=61.2
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCE-EEeecccCCHHHHHHHHHHHHHHHHhhc
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQ-VLGKGIGSTWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGk-vyG~G~G~SKKeAKqqAAk~AL~sL~s~ 909 (957)
..||++.|+|+||+.+. .+.|.. + +.||+|.+.|++.|.|+|+ ++|.|+|+|||+|+|+||+.||..|.-+
T Consensus 5 ~~D~KT~LQE~~Q~~~~-~p~Y~v-~-~~GpdH~k~F~v~v~i~~~~~~g~G~G~SKK~AEQ~AA~~AL~~l~~l 76 (94)
T 1t4n_A 5 DMNAKRQLYSLIGYASL-RLHYVT-V-KKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKML 76 (94)
T ss_dssp CHHHHHHHHHHTCSSSS-CCEEEE-C-CCCSSSCCSEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHCHHHH
T ss_pred CCCchHHHHHHHcCCCC-CCEEEE-e-eeCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 34999999999998754 445554 3 3599999999999999999 9999999999999999999999988643
No 60
>1o0w_A Ribonuclease III, RNAse III; TM1102, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.00A {Thermotoga maritima} SCOP: a.149.1.1 d.50.1.1
Probab=99.35 E-value=1.4e-12 Score=136.53 Aligned_cols=69 Identities=25% Similarity=0.298 Sum_probs=61.8
Q ss_pred CCchHHHHHHHHhcCC-CeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 705 ETPSGVLQDIAMKCGT-KVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 705 ~n~KS~LQE~~QK~~~-~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
.+||+.||||||+.+. .++|+++.+ ++|++.|+++|+|+|+.+|+|.|+|||+|||+||+.||+.|..+
T Consensus 179 ~dpkt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 250 (252)
T 1o0w_A 179 FDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKLLKE 250 (252)
T ss_dssp SCHHHHHHHHHHHHHSSCCEEEEEEEECCTTSCEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHcCCCCceEEEEeeeCCCCCCeEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhhc
Confidence 5799999999999876 689998764 56999999999999999999999999999999999999999653
No 61
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA complex; 1.70A {Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A 2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A 1jfz_A 1rc5_A
Probab=99.35 E-value=1.2e-12 Score=134.17 Aligned_cols=67 Identities=30% Similarity=0.345 Sum_probs=60.8
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002166 704 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 771 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~-~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~ 771 (957)
..+||+.||||||+++.. ++|+++.+ ++|++.|+++|.|+|+ +|.|.|+|||+|||+||+.||+.|.
T Consensus 149 ~~~pks~LqE~~q~~~~~~p~Y~~~~~~G~~h~~~F~v~v~v~~~-~~~G~G~skK~Ae~~AA~~AL~~L~ 218 (221)
T 2nug_A 149 KKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLE 218 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHcCCCCceEEEEEeeCCCCCceEEEEEEECCE-EEEEecCCHHHHHHHHHHHHHHHhh
Confidence 357999999999998765 79998755 5789999999999999 9999999999999999999999985
No 62
>1t4o_A Ribonuclease III; RNT1P, DSRBD, RNA-binding, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: d.50.1.1 PDB: 1t4l_B 2lbs_B
Probab=99.32 E-value=5.6e-13 Score=126.45 Aligned_cols=83 Identities=19% Similarity=0.238 Sum_probs=63.9
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCE-EEeecccCCHHHHHHHHHHHHHHHHhhccCCCC
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQ-VLGKGIGSTWDEAKMQAAEKALGSLRSMFGQFP 914 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGk-vyG~G~G~SKKeAKqqAAk~AL~sL~s~~~~~~ 914 (957)
..||++.|+||||+.+ ..+.|.. +. .||+|.+.|++.|.|+|+ ++|.|+|+|||+|+|+||+.||..+.-+ ..+.
T Consensus 7 ~~D~KT~LQE~~Q~~~-~~P~Y~v-v~-~GPdH~k~F~v~V~i~g~~~~g~G~G~SKK~AEQ~AA~~AL~~l~~l-~Ky~ 82 (117)
T 1t4o_A 7 DMNAKRQLYSLIGYAS-LRLHYVT-VK-KPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKML-DFYA 82 (117)
T ss_dssp CTTHHHHHHHHHCCGG-GCCEEEE-EE-CCCSSCCCEEEEEECTTCCEEEEEEESSHHHHHHHHHHHHHHCHHHH-HHHT
T ss_pred CCCchHHHHHHHcCCC-CCCEEEE-ee-eCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 4599999999999855 4445543 33 499999999999999999 9999999999999999999999988543 4566
Q ss_pred ccccCCCC
Q 002166 915 QKHQGSPR 922 (957)
Q Consensus 915 pkrq~sp~ 922 (957)
-.|+.-||
T Consensus 83 ~~r~~~~r 90 (117)
T 1t4o_A 83 KQRAAIPR 90 (117)
T ss_dssp C-------
T ss_pred HHHhhcCC
Confidence 66765555
No 63
>3n3w_A Ribonuclease III; nuclease domain, ribonuclase III, IDP90862, csgid, structura genomics; 2.21A {Campylobacter jejuni subsp}
Probab=99.22 E-value=1e-12 Score=137.74 Aligned_cols=69 Identities=20% Similarity=0.275 Sum_probs=0.0
Q ss_pred CCCchHHHHHHHHhcCCC-eEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 704 TETPSGVLQDIAMKCGTK-VEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~-~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
..+||+.||||||+++.. ++|+++.+ ++|++.|+|+|+|+|+.+|+|.|+|||+|||+||+.||+.|..
T Consensus 176 ~~dpks~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 247 (248)
T 3n3w_A 176 IKDYKTKLQEITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIALEKLGA 247 (248)
T ss_dssp ------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEEeeccCCCCCceEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHc
Confidence 457999999999998865 69998754 5699999999999999999999999999999999999998853
No 64
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA complex; 1.70A {Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A 2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A 1jfz_A 1rc5_A
Probab=99.21 E-value=8.5e-12 Score=127.86 Aligned_cols=70 Identities=19% Similarity=0.097 Sum_probs=62.6
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHh
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLR 907 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~ 907 (957)
..||++.|+|+||+.++..+.|.. +..+|++|.+.|++.|.|+|+ +|.|+|+|||+|||+||+.||..|.
T Consensus 149 ~~~pks~LqE~~q~~~~~~p~Y~~-~~~~G~~h~~~F~v~v~v~~~-~~~G~G~skK~Ae~~AA~~AL~~L~ 218 (221)
T 2nug_A 149 KKDYKTILQEITQKRWKERPEYRL-ISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLE 218 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCCEEEE-EEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHcCCCCceEEE-EEeeCCCCCceEEEEEEECCE-EEEEecCCHHHHHHHHHHHHHHHhh
Confidence 469999999999999987655543 345799999999999999999 9999999999999999999999985
No 65
>1o0w_A Ribonuclease III, RNAse III; TM1102, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.00A {Thermotoga maritima} SCOP: a.149.1.1 d.50.1.1
Probab=99.20 E-value=1.1e-11 Score=129.77 Aligned_cols=72 Identities=22% Similarity=0.202 Sum_probs=63.3
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
..||++.|+||||+.++..+.|.. +..+|++|.+.|++.|.|+|+.+|.|+|+|||+|||+||+.||..|..
T Consensus 178 ~~dpkt~LqE~~q~~~~~~p~Y~~-~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 249 (252)
T 1o0w_A 178 LFDYKTALQEIVQSEHKVPPEYIL-VRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKLLK 249 (252)
T ss_dssp CSCHHHHHHHHHHHHHSSCCEEEE-EEEECCTTSCEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHcCCCCceEEE-EeeeCCCCCCeEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 469999999999999886555543 345799999999999999999999999999999999999999999963
No 66
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomic protein structure initiative; 2.10A {Mycobacterium tuberculosis}
Probab=99.19 E-value=1.8e-12 Score=134.54 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=0.0
Q ss_pred CCchHHHHHHHHhcCC-CeEEEEeee-cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhhh
Q 002166 705 ETPSGVLQDIAMKCGT-KVEFRPALV-ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANVY 774 (957)
Q Consensus 705 ~n~KS~LQE~~QK~~~-~~~Y~~v~~-~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~~ 774 (957)
.+||+.||||||+++. .++|+++.+ ++|++.|+++|+|+|+.+|+|.|+|||+|||+||+.||+.|....
T Consensus 162 ~dpkt~Lqe~~q~~~~~~p~Y~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~skk~Ae~~AA~~AL~~L~~~~ 233 (242)
T 2a11_A 162 LDWKTSLQELTAARGLGAPSYLVTSTGPDHDKEFTAVVVVMDSEYGSGVGRSKKEAEQKAAAAAWKALEVLD 233 (242)
T ss_dssp ------------------------------------------------------------------------
T ss_pred CChHHHHHHHHHHhCCCCCeEEEeccCCCCCCeEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHhhcc
Confidence 4689999999999885 589998753 579999999999999999999999999999999999999997643
No 67
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein; 2.60A {Homo sapiens}
Probab=99.17 E-value=3.2e-11 Score=125.61 Aligned_cols=72 Identities=25% Similarity=0.117 Sum_probs=62.6
Q ss_pred CCCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhc
Q 002166 835 KLMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~ 909 (957)
...||++.|+||||+.++..+.|.. +..+|++ +.|++.|.|+|+.||.|.|+|||+|||.||+.||..|...
T Consensus 20 ~~kd~ks~LqE~~q~~~~~~p~Y~~-~~~~Gp~--~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~aL~~L~~~ 91 (232)
T 2yt4_A 20 NGKSEVCILHEYMQRVLKVRPVYNF-FECENPS--EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPD 91 (232)
T ss_dssp TTSCHHHHHHHHHHHTTCCCCEEEE-EECSCTT--SCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHSTT
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEE-EeeECCC--CcEEEEEEECCEEEeecCCCCHHHHHHHHHHHHHHHHHhh
Confidence 4569999999999999987655543 2356777 8999999999999999999999999999999999999763
No 68
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Probab=99.15 E-value=7.1e-11 Score=123.09 Aligned_cols=64 Identities=20% Similarity=0.349 Sum_probs=57.2
Q ss_pred CCCchHHHHHHHHhcCCCeEEEEeee--cCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 704 TETPSGVLQDIAMKCGTKVEFRPALV--ASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~~~~Y~~v~~--~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
..+||+.|||| ...+.|+++.+ ++|+++|+++|.|+|+.+ .|.|+|||+|||+||+.||+.|..
T Consensus 160 ~~d~ks~LqE~----~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~sKK~Aeq~AA~~al~~L~~ 225 (236)
T 2l3j_A 160 GKNPVMILNEL----RPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFN 225 (236)
T ss_dssp SCCHHHHHHHH----CCCEEEEEECCSSSSSSCCEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHhc----CCCCcEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHcc
Confidence 45899999999 45689998765 579999999999999986 999999999999999999999964
No 69
>3n3w_A Ribonuclease III; nuclease domain, ribonuclase III, IDP90862, csgid, structura genomics; 2.21A {Campylobacter jejuni subsp}
Probab=99.14 E-value=4.4e-12 Score=132.94 Aligned_cols=72 Identities=18% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
..||++.|+|+||+.++..+.|.. +..+|++|.+.|++.|.|+|+.+|.|+|+|||+|||+||+.||..|..
T Consensus 176 ~~dpks~LqE~~q~~~~~~p~Y~~-~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 247 (248)
T 3n3w_A 176 IKDYKTKLQEITQGKIGQTPQYET-VRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIALEKLGA 247 (248)
T ss_dssp -------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEE-eeccCCCCCceEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHc
Confidence 469999999999999998877765 456899999999999999999999999999999999999999999865
No 70
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomic protein structure initiative; 2.10A {Mycobacterium tuberculosis}
Probab=99.03 E-value=2.4e-11 Score=126.08 Aligned_cols=72 Identities=26% Similarity=0.297 Sum_probs=0.0
Q ss_pred CCChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhc
Q 002166 836 LMGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 836 ~~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~ 909 (957)
..||++.|+|+||+.++..+.|.. . .+|++|.+.|++.|.|+|+.+|.|+|+|||+|||.||+.||..|...
T Consensus 161 ~~dpkt~Lqe~~q~~~~~~p~Y~~-~-~~Gp~h~~~F~v~v~v~g~~~~~G~G~skk~Ae~~AA~~AL~~L~~~ 232 (242)
T 2a11_A 161 GLDWKTSLQELTAARGLGAPSYLV-T-STGPDHDKEFTAVVVVMDSEYGSGVGRSKKEAEQKAAAAAWKALEVL 232 (242)
T ss_dssp --------------------------------------------------------------------------
T ss_pred cCChHHHHHHHHHHhCCCCCeEEE-e-ccCCCCCCeEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHhhc
Confidence 459999999999999987766664 2 38999999999999999999999999999999999999999999743
No 71
>3rv0_A K. polysporus DCR1; RNAse III enzyme, RNA binding protein; 2.29A {Vanderwaltozyma polyspora}
Probab=98.96 E-value=6.2e-11 Score=129.87 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=0.0
Q ss_pred CCCchHHHHHHHHhcCC--CeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 704 TETPSGVLQDIAMKCGT--KVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 704 ~~n~KS~LQE~~QK~~~--~~~Y~~v~~~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
..+|||.||||||+++. .++|+++.+.+. |+|+|+|+|+.+|.|+|+|||+|||+||+.||+.|..
T Consensus 253 ~~d~Kt~LqE~~Q~~~~~~~~~Y~~~~~~Gp---F~v~v~i~~~~~g~G~G~SKK~AEq~AA~~AL~~L~~ 320 (341)
T 3rv0_A 253 NKNAKNELAELLQINKLGHKLHYRKLTEMPP---FRVEVKIGDILLDEAEGNSIREAEHRAAMKVLENDEL 320 (341)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEEEEeccCC---EEEEEEECCEEEEEEEeCCHHHHHHHHHHHHHHHhhh
Confidence 35799999999999873 469998754433 9999999999999999999999999999999999965
No 72
>3c4b_A Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding, endonuclease, HEL hydrolase, nucleotide-binding, phosphoprotein, RN binding; HET: MSE; 1.68A {Mus musculus} PDB: 3c4t_A 2eb1_A
Probab=98.92 E-value=1.5e-09 Score=113.89 Aligned_cols=65 Identities=20% Similarity=0.310 Sum_probs=52.3
Q ss_pred chHHHHHHHHhcCCCeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHh
Q 002166 707 PSGVLQDIAMKCGTKVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLAN 772 (957)
Q Consensus 707 ~KS~LQE~~QK~~~~~~Y~~v~~~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~ 772 (957)
+|+.||||.|.+.....|... ...|++.|+|+|.|+|+.+|+|.|+|||+|||+||+.||++|..
T Consensus 199 ~k~~l~el~~~~~~~~~~~~~-~~~~~~~f~v~v~v~~~~~~~G~G~SkK~Aeq~AA~~AL~~l~~ 263 (265)
T 3c4b_A 199 PRSPVRELLEMEPETAKFSPA-ERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKA 263 (265)
T ss_dssp CCCHHHHHHHHCTTTEEECCC-EECTTSCEEEEEEETTTEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhccCCceeeec-cccCCCcEEEEEEEecceEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 456666666665544445432 24699999999999999999999999999999999999999964
No 73
>3rv0_A K. polysporus DCR1; RNAse III enzyme, RNA binding protein; 2.29A {Vanderwaltozyma polyspora}
Probab=98.62 E-value=3.9e-09 Score=115.73 Aligned_cols=69 Identities=22% Similarity=0.204 Sum_probs=0.0
Q ss_pred CCCChhHHHHHHhhhcCCcee-eeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhhc
Q 002166 835 KLMGSVSALKELCMTEGLGVV-FQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRSM 909 (957)
Q Consensus 835 ~~~NpVglLNELcqkeGL~v~-f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~ 909 (957)
...||++.|+|+||+.++..+ .|.. +...|+ |++.|.|+|+.+|.|+|+|||+|||+||+.||..|..+
T Consensus 252 ~~~d~Kt~LqE~~Q~~~~~~~~~Y~~-~~~~Gp-----F~v~v~i~~~~~g~G~G~SKK~AEq~AA~~AL~~L~~~ 321 (341)
T 3rv0_A 252 LNKNAKNELAELLQINKLGHKLHYRK-LTEMPP-----FRVEVKIGDILLDEAEGNSIREAEHRAAMKVLENDELL 321 (341)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred cccCHHHHHHHHHHHcCCCCCceEEE-EeccCC-----EEEEEEECCEEEEEEEeCCHHHHHHHHHHHHHHHhhhh
Confidence 346999999999999886543 3432 233444 99999999999999999999999999999999999765
No 74
>3c4b_A Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding, endonuclease, HEL hydrolase, nucleotide-binding, phosphoprotein, RN binding; HET: MSE; 1.68A {Mus musculus} PDB: 3c4t_A 2eb1_A
Probab=98.47 E-value=1.2e-07 Score=99.42 Aligned_cols=64 Identities=30% Similarity=0.307 Sum_probs=51.2
Q ss_pred CChhHHHHHHhhhcCCceeeeecCCCCCCCCCCccEEEEEEECCEEEeecccCCHHHHHHHHHHHHHHHHhh
Q 002166 837 MGSVSALKELCMTEGLGVVFQQQPPSSANSVQKDEVYAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRS 908 (957)
Q Consensus 837 ~NpVglLNELcqkeGL~v~f~~~~~~~sGp~h~keF~~qV~IgGkvyG~G~G~SKKeAKqqAAk~AL~sL~s 908 (957)
++|+..|.|+|++ +..+. ..+..|.+.|++.|.|+|+.+|+|+|+|||+|||+||+.||..|..
T Consensus 200 k~~l~el~~~~~~----~~~~~----~~~~~~~~~f~v~v~v~~~~~~~G~G~SkK~Aeq~AA~~AL~~l~~ 263 (265)
T 3c4b_A 200 RSPVRELLEMEPE----TAKFS----PAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKA 263 (265)
T ss_dssp CCHHHHHHHHCTT----TEEEC----CCEECTTSCEEEEEEETTTEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhccC----Cceee----eccccCCCcEEEEEEEecceEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 4566666666653 22332 2566788999999999999999999999999999999999999963
No 75
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=97.82 E-value=0.00012 Score=71.01 Aligned_cols=80 Identities=20% Similarity=0.300 Sum_probs=57.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCccc----hhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRKS----LFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~Ks----L~~lfp~ 334 (957)
+++.||+.+++.+|+ +..|.+.|.|++.+.++..+++.+ +...+|+-+++.++ +..|. +..++..
T Consensus 83 ~~~~pg~~~~l~~L~---~~g~~~~i~tn~~~~~~~~~l~~~-------~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~ 152 (216)
T 3kbb_A 83 LKENPGVREALEFVK---SKRIKLALATSTPQREALERLRRL-------DLEKYFDVMVFGDQVKNGKPDPEIYLLVLER 152 (216)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHT-------TCGGGCSEEECGGGSSSCTTSTHHHHHHHHH
T ss_pred cccCccHHHHHHHHH---HcCCCcccccCCcHHHHHHHHHhc-------CCCccccccccccccCCCcccHHHHHHHHHh
Confidence 466799999888887 677999999999999999999984 44556678887643 22221 2222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.++.++-+|+|+|+.
T Consensus 153 lg~~p~e~l~VgDs~ 167 (216)
T 3kbb_A 153 LNVVPEKVVVFEDSK 167 (216)
T ss_dssp HTCCGGGEEEEECSH
T ss_pred hCCCccceEEEecCH
Confidence 126788899999985
No 76
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.82 E-value=5e-05 Score=73.16 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=58.0
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCcccccccc--CeEEeccCCCcc----chhhhc
Q 002166 259 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELL--DRIVCVKSGSRK----SLFNVF 332 (957)
Q Consensus 259 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~--~RIisr~sg~~K----sL~~lf 332 (957)
.+++.|++.+++++|+ .+-|.++|+|++.+.++..+++.+. ...+| +.|++.+.+..| .+..+.
T Consensus 68 ~~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~-------l~~~f~~~~i~~~~~~~~kp~~~~~~~~~ 137 (205)
T 3m9l_A 68 GSRPAPGAVELVRELA---GRGYRLGILTRNARELAHVTLEAIG-------LADCFAEADVLGRDEAPPKPHPGGLLKLA 137 (205)
T ss_dssp EEEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTT-------CGGGSCGGGEECTTTSCCTTSSHHHHHHH
T ss_pred cCCCCccHHHHHHHHH---hcCCeEEEEeCCchHHHHHHHHHcC-------chhhcCcceEEeCCCCCCCCCHHHHHHHH
Confidence 4567799999777776 4569999999999999999999854 33445 577777554333 344444
Q ss_pred cCCCCCCcEEEEEcCCc
Q 002166 333 QDGTCHPKMALVIDDRL 349 (957)
Q Consensus 333 p~g~~~~~mvVIIDDR~ 349 (957)
...+..++-+++|+|+.
T Consensus 138 ~~~g~~~~~~i~iGD~~ 154 (205)
T 3m9l_A 138 EAWDVSPSRMVMVGDYR 154 (205)
T ss_dssp HHTTCCGGGEEEEESSH
T ss_pred HHcCCCHHHEEEECCCH
Confidence 33336778899999986
No 77
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.67 E-value=0.00011 Score=70.15 Aligned_cols=80 Identities=13% Similarity=0.164 Sum_probs=54.4
Q ss_pred EeeCcChHHHHHHHhhhcccc-EEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKR-FEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCH 338 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~-FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~ 338 (957)
+++.|++.+++..|+ ..- |.+.|+|++.+.++..+++.+. ...+++.|++........+..+....+..
T Consensus 104 ~~~~~~~~~~l~~l~---~~g~~~~~i~t~~~~~~~~~~l~~~~-------~~~~f~~~~~~~kpk~~~~~~~~~~lgi~ 173 (234)
T 3ddh_A 104 IELLPGVKETLKTLK---ETGKYKLVVATKGDLLDQENKLERSG-------LSPYFDHIEVMSDKTEKEYLRLLSILQIA 173 (234)
T ss_dssp CCBCTTHHHHHHHHH---HHCCCEEEEEEESCHHHHHHHHHHHT-------CGGGCSEEEEESCCSHHHHHHHHHHHTCC
T ss_pred CCcCccHHHHHHHHH---hCCCeEEEEEeCCchHHHHHHHHHhC-------cHhhhheeeecCCCCHHHHHHHHHHhCCC
Confidence 456799999777775 333 9999999999999999988743 33455677776433333333333222267
Q ss_pred CcEEEEEcCCc
Q 002166 339 PKMALVIDDRL 349 (957)
Q Consensus 339 ~~mvVIIDDR~ 349 (957)
++-+++|+|+.
T Consensus 174 ~~~~i~iGD~~ 184 (234)
T 3ddh_A 174 PSELLMVGNSF 184 (234)
T ss_dssp GGGEEEEESCC
T ss_pred cceEEEECCCc
Confidence 78899999984
No 78
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=97.49 E-value=0.00018 Score=69.08 Aligned_cols=80 Identities=16% Similarity=0.082 Sum_probs=52.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-------------C--C
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-------------G--S 324 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-------------g--~ 324 (957)
++++|++.+++.+|+ ..-|.++|+|++.+.++..+++.+.- ..++..+++.++ + .
T Consensus 74 ~~~~~~~~~~l~~l~---~~g~~~~i~S~~~~~~~~~~l~~~gl-------~~~f~~~~~~~~~~~~~~~~~~~~~~k~k 143 (217)
T 3m1y_A 74 LPLFEGALELVSALK---EKNYKVVCFSGGFDLATNHYRDLLHL-------DAAFSNTLIVENDALNGLVTGHMMFSHSK 143 (217)
T ss_dssp CCBCBTHHHHHHHHH---TTTEEEEEEEEEEHHHHHHHHHHHTC-------SEEEEEEEEEETTEEEEEEEESCCSTTHH
T ss_pred CcCCCCHHHHHHHHH---HCCCEEEEEcCCchhHHHHHHHHcCc-------chhccceeEEeCCEEEeeeccCCCCCCCh
Confidence 457899999777776 55699999999999999999998643 233345554322 1 1
Q ss_pred ccchhhhccCCCCCCcEEEEEcCCc
Q 002166 325 RKSLFNVFQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 325 ~KsL~~lfp~g~~~~~mvVIIDDR~ 349 (957)
...+..++...+..++-++.|+|+.
T Consensus 144 ~~~~~~~~~~~g~~~~~~i~vGDs~ 168 (217)
T 3m1y_A 144 GEMLLVLQRLLNISKTNTLVVGDGA 168 (217)
T ss_dssp HHHHHHHHHHHTCCSTTEEEEECSG
T ss_pred HHHHHHHHHHcCCCHhHEEEEeCCH
Confidence 1122223221125667788999975
No 79
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.49 E-value=0.00094 Score=64.52 Aligned_cols=82 Identities=20% Similarity=0.210 Sum_probs=58.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-C----ccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-S----RKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~----~KsL~~lfp~ 334 (957)
+++.|++.+++..|+ .. |.+.|+|++.+.++..+++.+ +...+++.+++.+.. . ...+..++..
T Consensus 102 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 170 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQ---QQ-FDLYIVTNGVSHTQYKRLRDS-------GLFPFFKDIFVSEDTGFQKPMKEYFNYVFER 170 (238)
T ss_dssp CCBCTTHHHHHHHHH---TT-SEEEEEECSCHHHHHHHHHHT-------TCGGGCSEEEEGGGTTSCTTCHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHH---hc-CeEEEEeCCCHHHHHHHHHHc-------ChHhhhheEEEecccCCCCCChHHHHHHHHH
Confidence 467799999777775 44 999999999999999998885 344556788876432 2 2234445444
Q ss_pred CC-CCCcEEEEEcCCc--ccC
Q 002166 335 GT-CHPKMALVIDDRL--KVW 352 (957)
Q Consensus 335 g~-~~~~mvVIIDDR~--dVW 352 (957)
.+ ..++-+++|+|+. |+-
T Consensus 171 ~g~~~~~~~i~vGD~~~~Di~ 191 (238)
T 3ed5_A 171 IPQFSAEHTLIIGDSLTADIK 191 (238)
T ss_dssp STTCCGGGEEEEESCTTTTHH
T ss_pred cCCCChhHeEEECCCcHHHHH
Confidence 34 5678899999985 553
No 80
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.43 E-value=0.0006 Score=64.30 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=55.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.+++.++. +...+..++..
T Consensus 83 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 152 (216)
T 2pib_A 83 LKENPGVREALEFVK---SKRIKLALATSTPQREALERLRRL-------DLEKYFDVMVFGDQVKNGKPDPEIYLLVLER 152 (216)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHT-------TCGGGCSEEECGGGSSSCTTSTHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---HCCCCEEEEeCCcHHhHHHHHHhc-------ChHHhcCEEeecccCCCCCcCcHHHHHHHHH
Confidence 456799999777776 455999999999999999999884 334556677776432 11223333222
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.+..++-+++|+|+.
T Consensus 153 ~~~~~~~~i~iGD~~ 167 (216)
T 2pib_A 153 LNVVPEKVVVFEDSK 167 (216)
T ss_dssp HTCCGGGEEEEECSH
T ss_pred cCCCCceEEEEeCcH
Confidence 125677899999985
No 81
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.42 E-value=0.00026 Score=66.74 Aligned_cols=79 Identities=10% Similarity=0.115 Sum_probs=56.1
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~K----sL~~lfp~g 335 (957)
++.|++.+++.+|+ ..-+.++|+|++.+.++..+++.+ +...+++.+++.++. ..| .+..++...
T Consensus 89 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 158 (214)
T 3e58_A 89 LIFPDVLKVLNEVK---SQGLEIGLASSSVKADIFRALEEN-------RLQGFFDIVLSGEEFKESKPNPEIYLTALKQL 158 (214)
T ss_dssp HBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHH
T ss_pred CcCchHHHHHHHHH---HCCCCEEEEeCCcHHHHHHHHHHc-------CcHhheeeEeecccccCCCCChHHHHHHHHHc
Confidence 56799999777776 455999999999999999999884 444566788887542 222 333333222
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
+..++-++.|+|+.
T Consensus 159 ~~~~~~~~~iGD~~ 172 (214)
T 3e58_A 159 NVQASRALIIEDSE 172 (214)
T ss_dssp TCCGGGEEEEECSH
T ss_pred CCChHHeEEEeccH
Confidence 26678899999985
No 82
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.39 E-value=0.00047 Score=67.25 Aligned_cols=78 Identities=22% Similarity=0.319 Sum_probs=55.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCcc----chhhhccCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRK----SLFNVFQDG 335 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~K----sL~~lfp~g 335 (957)
+++.||+.+++..|+ . .|.+.|.|++.+.++..+++.+ +...+|+.|++.+ +..| -+..++...
T Consensus 83 ~~~~~g~~~~l~~L~---~-~~~l~i~T~~~~~~~~~~l~~~-------gl~~~f~~i~~~~-~~~Kp~p~~~~~~~~~l 150 (210)
T 2ah5_A 83 AQLFPQIIDLLEELS---S-SYPLYITTTKDTSTAQDMAKNL-------EIHHFFDGIYGSS-PEAPHKADVIHQALQTH 150 (210)
T ss_dssp CEECTTHHHHHHHHH---T-TSCEEEEEEEEHHHHHHHHHHT-------TCGGGCSEEEEEC-SSCCSHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHH---c-CCeEEEEeCCCHHHHHHHHHhc-------CchhheeeeecCC-CCCCCChHHHHHHHHHc
Confidence 467899999777776 3 7899999999999999998874 4455667888776 4222 122222222
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
++.++-+++|+|+.
T Consensus 151 g~~p~~~~~vgDs~ 164 (210)
T 2ah5_A 151 QLAPEQAIIIGDTK 164 (210)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCCcccEEEECCCH
Confidence 26778899999984
No 83
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.39 E-value=0.00012 Score=70.77 Aligned_cols=85 Identities=20% Similarity=0.219 Sum_probs=57.6
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ .. |.+.|+|++.+.++..+++.+ +...+++.+++.+. +..| -+..+...
T Consensus 99 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~-------~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (234)
T 3u26_A 99 GELYPEVVEVLKSLK---GK-YHVGMITDSDTEQAMAFLDAL-------GIKDLFDSITTSEEAGFFKPHPRIFELALKK 167 (234)
T ss_dssp CCBCTTHHHHHHHHT---TT-SEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEHHHHTBCTTSHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---hC-CcEEEEECCCHHHHHHHHHHc-------CcHHHcceeEeccccCCCCcCHHHHHHHHHH
Confidence 356799999777775 45 999999999999999998874 44455678888643 2111 13333322
Q ss_pred CCCCCcEEEEEcCCc--ccCCCC
Q 002166 335 GTCHPKMALVIDDRL--KVWDDK 355 (957)
Q Consensus 335 g~~~~~mvVIIDDR~--dVW~~~ 355 (957)
.+..++-+++|+|+. |+-...
T Consensus 168 ~~~~~~~~~~vGD~~~~Di~~a~ 190 (234)
T 3u26_A 168 AGVKGEEAVYVGDNPVKDCGGSK 190 (234)
T ss_dssp HTCCGGGEEEEESCTTTTHHHHH
T ss_pred cCCCchhEEEEcCCcHHHHHHHH
Confidence 225678899999985 454333
No 84
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.37 E-value=0.00056 Score=66.54 Aligned_cols=80 Identities=13% Similarity=0.146 Sum_probs=55.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+|+.|++.++. ..| .+..+...
T Consensus 102 ~~~~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~l~~~-------gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 171 (231)
T 3kzx_A 102 FMLNDGAIELLDTLK---ENNITMAIVSNKNGERLRSEIHHK-------NLTHYFDSIIGSGDTGTIKPSPEPVLAALTN 171 (231)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHT-------TCGGGCSEEEEETSSSCCTTSSHHHHHHHHH
T ss_pred ceECcCHHHHHHHHH---HCCCeEEEEECCCHHHHHHHHHHC-------CchhheeeEEcccccCCCCCChHHHHHHHHH
Confidence 457799999777776 456999999999999999999884 444566788876432 212 23333322
Q ss_pred CCCCCc-EEEEEcCCc
Q 002166 335 GTCHPK-MALVIDDRL 349 (957)
Q Consensus 335 g~~~~~-mvVIIDDR~ 349 (957)
....++ -+++|+|+.
T Consensus 172 lgi~~~~~~v~vGD~~ 187 (231)
T 3kzx_A 172 INIEPSKEVFFIGDSI 187 (231)
T ss_dssp HTCCCSTTEEEEESSH
T ss_pred cCCCcccCEEEEcCCH
Confidence 125566 788899886
No 85
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.34 E-value=0.0006 Score=66.90 Aligned_cols=80 Identities=13% Similarity=0.165 Sum_probs=55.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~K----sL~~lfp~ 334 (957)
+++.|++.+++.+|+ ..-|.++|+|++.+.++..+++.+ +...+++.+++.+.. ..| .+..+...
T Consensus 109 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 178 (240)
T 3sd7_A 109 NKIYENMKEILEMLY---KNGKILLVATSKPTVFAETILRYF-------DIDRYFKYIAGSNLDGTRVNKNEVIQYVLDL 178 (240)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHT-------TCGGGCSEEEEECTTSCCCCHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHH---HCCCeEEEEeCCcHHHHHHHHHHc-------CcHhhEEEEEeccccCCCCCCHHHHHHHHHH
Confidence 467899999777776 445999999999999999999884 334456678876542 112 22333222
Q ss_pred CCCC-CcEEEEEcCCc
Q 002166 335 GTCH-PKMALVIDDRL 349 (957)
Q Consensus 335 g~~~-~~mvVIIDDR~ 349 (957)
.+.. ++-+++|+|+.
T Consensus 179 ~g~~~~~~~i~vGD~~ 194 (240)
T 3sd7_A 179 CNVKDKDKVIMVGDRK 194 (240)
T ss_dssp HTCCCGGGEEEEESSH
T ss_pred cCCCCCCcEEEECCCH
Confidence 1256 78899999985
No 86
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.31 E-value=0.00052 Score=67.36 Aligned_cols=84 Identities=18% Similarity=0.140 Sum_probs=54.4
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCccc----hhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRKS----LFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~Ks----L~~lfp~g 335 (957)
.+.|++.+++..|+ .. |.+.|+|++.+.++..+++.|=+. ..++...+|+.|++.++ +..|. +..++...
T Consensus 112 ~~~~~~~~~l~~l~---~~-~~~~i~Sn~~~~~~~~~~~~l~~~-~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~ 186 (229)
T 4dcc_A 112 DIPTYKLDLLLKLR---EK-YVVYLLSNTNDIHWKWVCKNAFPY-RTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDA 186 (229)
T ss_dssp CCCHHHHHHHHHHT---TT-SEEEEEECCCHHHHHHHHHHTSCB-TTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHH---hc-CcEEEEECCChHHHHHHHhhhhhh-ccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHc
Confidence 35689999777775 34 999999999999999888776211 11344456678887632 22221 22222211
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
+..++-+|+|+|+.
T Consensus 187 g~~~~~~~~vGD~~ 200 (229)
T 4dcc_A 187 GIDPKETFFIDDSE 200 (229)
T ss_dssp TCCGGGEEEECSCH
T ss_pred CCCHHHeEEECCCH
Confidence 25678899999986
No 87
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=97.28 E-value=0.00044 Score=67.32 Aligned_cols=79 Identities=19% Similarity=0.108 Sum_probs=54.7
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp~g 335 (957)
++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+|+.+++.+.. ....+..++...
T Consensus 104 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l 173 (237)
T 4ex6_A 104 LLYPGVLEGLDRLS---AAGFRLAMATSKVEKAARAIAELT-------GLDTRLTVIAGDDSVERGKPHPDMALHVARGL 173 (237)
T ss_dssp GBCTTHHHHHHHHH---HTTEEEEEECSSCHHHHHHHHHHH-------TGGGTCSEEECTTTSSSCTTSSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHH---hCCCcEEEEcCCChHHHHHHHHHc-------CchhheeeEEeCCCCCCCCCCHHHHHHHHHHc
Confidence 46789999777776 446999999999999999999885 334556678776542 112233332221
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
+..++-+++|+|+.
T Consensus 174 g~~~~~~i~vGD~~ 187 (237)
T 4ex6_A 174 GIPPERCVVIGDGV 187 (237)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCCHHHeEEEcCCH
Confidence 25678899999986
No 88
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=97.28 E-value=0.00021 Score=69.84 Aligned_cols=47 Identities=19% Similarity=0.256 Sum_probs=38.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCC-Cccc
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPES-NLIN 309 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g-~lFg 309 (957)
++++||+.++++.|+ ++-|.++|+|++.+.++..+++.+.-.. .+|.
T Consensus 85 ~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~ 132 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQ---ERNVQVFLISGGFRSIVEHVASKLNIPATNVFA 132 (225)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCccHHHHHHHHH---HCCCcEEEEeCChHHHHHHHHHHcCCCcccEEe
Confidence 467899999888886 4569999999999999999999876543 4554
No 89
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.25 E-value=0.00091 Score=64.21 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=53.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ .+ |.++|+|++.+.++..+++.+ +...+++.+++.++ +..| .+..++..
T Consensus 82 ~~~~~~~~~~l~~l~---~~-~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~ 150 (209)
T 2hdo_A 82 IELYPGITSLFEQLP---SE-LRLGIVTSQRRNELESGMRSY-------PFMMRMAVTISADDTPKRKPDPLPLLTALEK 150 (209)
T ss_dssp CEECTTHHHHHHHSC---TT-SEEEEECSSCHHHHHHHHTTS-------GGGGGEEEEECGGGSSCCTTSSHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHH---hc-CcEEEEeCCCHHHHHHHHHHc-------ChHhhccEEEecCcCCCCCCCcHHHHHHHHH
Confidence 467899999666664 45 999999999999999998874 33344567777643 2222 23333322
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
....++-++.|+|+.
T Consensus 151 ~~~~~~~~i~vGD~~ 165 (209)
T 2hdo_A 151 VNVAPQNALFIGDSV 165 (209)
T ss_dssp TTCCGGGEEEEESSH
T ss_pred cCCCcccEEEECCCh
Confidence 225677888898874
No 90
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=97.24 E-value=0.00086 Score=64.58 Aligned_cols=76 Identities=13% Similarity=0.179 Sum_probs=51.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC------------Cccc
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG------------SRKS 327 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg------------~~Ks 327 (957)
+++.|++.+++..|+ .. |.++|.|++.+.++..+++.++=. .+|. +.+++.+++ ..+.
T Consensus 68 ~~~~~g~~~~l~~l~---~~-~~~~i~s~~~~~~~~~~l~~~gl~-~~f~-----~~~~~~~~~~~~~~~~p~p~~~~~~ 137 (206)
T 1rku_A 68 LKPLEGAVEFVDWLR---ER-FQVVILSDTFYEFSQPLMRQLGFP-TLLC-----HKLEIDDSDRVVGYQLRQKDPKRQS 137 (206)
T ss_dssp CCCCTTHHHHHHHHH---TT-SEEEEEEEEEHHHHHHHHHHTTCC-CEEE-----EEEEECTTSCEEEEECCSSSHHHHH
T ss_pred cCCCccHHHHHHHHH---hc-CcEEEEECChHHHHHHHHHHcCCc-ceec-----ceeEEcCCceEEeeecCCCchHHHH
Confidence 356899999777775 44 999999999999999999986533 2443 455553222 1123
Q ss_pred hhhhccCCCCCCcEEEEEcCCc
Q 002166 328 LFNVFQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 328 L~~lfp~g~~~~~mvVIIDDR~ 349 (957)
|+++- ..+.-+++|+|+.
T Consensus 138 l~~l~----~~~~~~~~iGD~~ 155 (206)
T 1rku_A 138 VIAFK----SLYYRVIAAGDSY 155 (206)
T ss_dssp HHHHH----HTTCEEEEEECSS
T ss_pred HHHHH----hcCCEEEEEeCCh
Confidence 44432 2456788999874
No 91
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.24 E-value=0.00081 Score=66.17 Aligned_cols=80 Identities=18% Similarity=0.181 Sum_probs=53.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+. ...+|+.|++.++. +...+..+...
T Consensus 82 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~g-------l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 151 (222)
T 2nyv_A 82 TKPYPEIPYTLEALK---SKGFKLAVVSNKLEELSKKILDILN-------LSGYFDLIVGGDTFGEKKPSPTPVLKTLEI 151 (222)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHTT-------CGGGCSEEECTTSSCTTCCTTHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCeEEEEcCCCHHHHHHHHHHcC-------CHHHheEEEecCcCCCCCCChHHHHHHHHH
Confidence 578899999766665 4459999999999999999998853 33455677775431 11222322221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
....++-+++|+|+.
T Consensus 152 ~~~~~~~~~~vGD~~ 166 (222)
T 2nyv_A 152 LGEEPEKALIVGDTD 166 (222)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCCCchhEEEECCCH
Confidence 125667788888884
No 92
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.21 E-value=0.0021 Score=61.84 Aligned_cols=80 Identities=16% Similarity=0.077 Sum_probs=55.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+. ...+++.+++.+.. +...+..++..
T Consensus 90 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~-------l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 159 (233)
T 3s6j_A 90 IIALPGAVELLETLD---KENLKWCIATSGGIDTATINLKALK-------LDINKINIVTRDDVSYGKPDPDLFLAAAKK 159 (233)
T ss_dssp CEECTTHHHHHHHHH---HTTCCEEEECSSCHHHHHHHHHTTT-------CCTTSSCEECGGGSSCCTTSTHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCeEEEEeCCchhhHHHHHHhcc-------hhhhhheeeccccCCCCCCChHHHHHHHHH
Confidence 467799999777775 4458999999999999999998753 33445677776432 12234444332
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
..+.++-++.|+|+.
T Consensus 160 l~~~~~~~i~iGD~~ 174 (233)
T 3s6j_A 160 IGAPIDECLVIGDAI 174 (233)
T ss_dssp TTCCGGGEEEEESSH
T ss_pred hCCCHHHEEEEeCCH
Confidence 236778899999986
No 93
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.15 E-value=0.00084 Score=66.96 Aligned_cols=37 Identities=8% Similarity=0.339 Sum_probs=31.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHH
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWR 299 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~r 299 (957)
++++||+.+++..|+ ..-|.++|.|++.+.++..+++
T Consensus 76 ~~~~pg~~~~l~~L~---~~g~~~~ivS~~~~~~~~~~l~ 112 (236)
T 2fea_A 76 AKIREGFREFVAFIN---EHEIPFYVISGGMDFFVYPLLE 112 (236)
T ss_dssp CCBCTTHHHHHHHHH---HHTCCEEEEEEEEHHHHHHHHT
T ss_pred CCCCccHHHHHHHHH---hCCCeEEEEeCCcHHHHHHHHh
Confidence 568899999777776 4569999999999999998887
No 94
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=97.15 E-value=0.00084 Score=69.11 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=54.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccc----hhhhccCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKS----LFNVFQDG 335 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~Ks----L~~lfp~g 335 (957)
+++.|++.+++..|+ .+-|.++|+|++.+.++..+++.++- .+...+|+.|++.+.+ .|- +..++...
T Consensus 129 ~~~~~g~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~l~~~~~----~~l~~~fd~i~~~~~~-~KP~p~~~~~~~~~l 200 (261)
T 1yns_A 129 AEFFADVVPAVRKWR---EAGMKVYIYSSGSVEAQKLLFGHSTE----GDILELVDGHFDTKIG-HKVESESYRKIADSI 200 (261)
T ss_dssp BCCCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHTBTT----BCCGGGCSEEECGGGC-CTTCHHHHHHHHHHH
T ss_pred cccCcCHHHHHHHHH---hCCCeEEEEeCCCHHHHHHHHHhhcc----cChHhhccEEEecCCC-CCCCHHHHHHHHHHh
Confidence 567899999877776 45689999999999999998886531 1233455677766333 332 22222111
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
++.++-+|+|+|+.
T Consensus 201 g~~p~~~l~VgDs~ 214 (261)
T 1yns_A 201 GCSTNNILFLTDVT 214 (261)
T ss_dssp TSCGGGEEEEESCH
T ss_pred CcCcccEEEEcCCH
Confidence 25677889998883
No 95
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=97.15 E-value=0.0017 Score=62.61 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=54.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~----KsL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+|+.+++.+.. .. ..+..++..
T Consensus 85 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 154 (226)
T 3mc1_A 85 NKVYDGIEALLSSLK---DYGFHLVVATSKPTVFSKQILEHF-------KLAFYFDAIVGSSLDGKLSTKEDVIRYAMES 154 (226)
T ss_dssp CCBCTTHHHHHHHHH---HHTCEEEEEEEEEHHHHHHHHHHT-------TCGGGCSEEEEECTTSSSCSHHHHHHHHHHH
T ss_pred CccCcCHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHHh-------CCHhheeeeeccCCCCCCCCCHHHHHHHHHH
Confidence 356799999777776 345999999999999999999884 344566788877542 11 122222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.+..++-+++|+|+.
T Consensus 155 lgi~~~~~i~iGD~~ 169 (226)
T 3mc1_A 155 LNIKSDDAIMIGDRE 169 (226)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCcCcccEEEECCCH
Confidence 125667899999986
No 96
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.13 E-value=0.0014 Score=63.27 Aligned_cols=79 Identities=14% Similarity=0.233 Sum_probs=54.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~----KsL~~lfp~ 334 (957)
+++.|++.+++..| .+.|.+.|+|++.+.++..+++.+ +...+++.+++.+.. .. .-+..++..
T Consensus 106 ~~~~~~~~~~l~~l----~~g~~~~i~sn~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 174 (240)
T 3qnm_A 106 SGLMPHAKEVLEYL----APQYNLYILSNGFRELQSRKMRSA-------GVDRYFKKIILSEDLGVLKPRPEIFHFALSA 174 (240)
T ss_dssp CCBSTTHHHHHHHH----TTTSEEEEEECSCHHHHHHHHHHH-------TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHH
T ss_pred CCcCccHHHHHHHH----HcCCeEEEEeCCchHHHHHHHHHc-------ChHhhceeEEEeccCCCCCCCHHHHHHHHHH
Confidence 45678999955555 356999999999999999998874 344556788887542 11 223333332
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.+..++-+|+|+|+.
T Consensus 175 lgi~~~~~~~iGD~~ 189 (240)
T 3qnm_A 175 TQSELRESLMIGDSW 189 (240)
T ss_dssp TTCCGGGEEEEESCT
T ss_pred cCCCcccEEEECCCc
Confidence 236788999999984
No 97
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=97.03 E-value=0.0031 Score=61.75 Aligned_cols=88 Identities=10% Similarity=0.033 Sum_probs=51.9
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhcc
Q 002166 259 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQ 333 (957)
Q Consensus 259 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp 333 (957)
.+++.|++.+++..|+ ..-|.++|.|++.+ ++..+++.+ +...+|+.|++.++ +..| -+..++.
T Consensus 93 ~~~~~~~~~~~l~~l~---~~g~~~~i~Tn~~~-~~~~~l~~~-------gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 161 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLK---SNGYKLALVSNASP-RVKTLLEKF-------DLKKYFDALALSYEIKAVKPNPKIFGFALA 161 (220)
T ss_dssp EEEECTTHHHHHHHHH---TTTCEEEECCSCHH-HHHHHHHHH-------TCGGGCSEEC-----------CCHHHHHHH
T ss_pred CceECcCHHHHHHHHH---HCCCEEEEEeCCcH-HHHHHHHhc-------CcHhHeeEEEeccccCCCCCCHHHHHHHHH
Confidence 5688999999666665 44699999999987 577777764 34445667777543 2112 2222222
Q ss_pred CCCCCCcEEEEEcCCc--ccCCCCCCCCeE
Q 002166 334 DGTCHPKMALVIDDRL--KVWDDKDQPRVH 361 (957)
Q Consensus 334 ~g~~~~~mvVIIDDR~--dVW~~~~~~~v~ 361 (957)
...+.+ ++|+|+. |+-... .-.+.
T Consensus 162 ~~~~~~---~~vgD~~~~Di~~a~-~aG~~ 187 (220)
T 2zg6_A 162 KVGYPA---VHVGDIYELDYIGAK-RSYVD 187 (220)
T ss_dssp HHCSSE---EEEESSCCCCCCCSS-SCSEE
T ss_pred HcCCCe---EEEcCCchHhHHHHH-HCCCe
Confidence 111333 8888886 576555 34454
No 98
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.03 E-value=0.0029 Score=63.25 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=54.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ .+-|.+.|+|++.+.++..+++.+ +...+++.+++.+.. ..| .+..+...
T Consensus 113 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 182 (243)
T 2hsz_A 113 SRLYPNVKETLEALK---AQGYILAVVTNKPTKHVQPILTAF-------GIDHLFSEMLGGQSLPEIKPHPAPFYYLCGK 182 (243)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHT-------TCGGGCSEEECTTTSSSCTTSSHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH---HCCCEEEEEECCcHHHHHHHHHHc-------CchheEEEEEecccCCCCCcCHHHHHHHHHH
Confidence 478899999777775 456999999999999999999985 333455677776432 222 22222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
....++-+++|+|+.
T Consensus 183 ~~~~~~~~~~vGD~~ 197 (243)
T 2hsz_A 183 FGLYPKQILFVGDSQ 197 (243)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCcChhhEEEEcCCH
Confidence 125667888999985
No 99
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=97.02 E-value=0.00036 Score=69.06 Aligned_cols=78 Identities=12% Similarity=0.070 Sum_probs=50.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHP 339 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~ 339 (957)
+++.||+.+++..|+ .+. .+.|.|++.+.++..+++.++=. .+|. .+++.......-|..+.. + ..+
T Consensus 95 ~~~~~g~~~~l~~l~---~~g-~~~i~Tn~~~~~~~~~l~~~gl~-~~f~------~~~~~~~~K~~~~~~~~~-~-~~~ 161 (231)
T 2p11_A 95 SRVYPGALNALRHLG---ARG-PTVILSDGDVVFQPRKIARSGLW-DEVE------GRVLIYIHKELMLDQVME-C-YPA 161 (231)
T ss_dssp GGBCTTHHHHHHHHH---TTS-CEEEEEECCSSHHHHHHHHTTHH-HHTT------TCEEEESSGGGCHHHHHH-H-SCC
T ss_pred CCcCccHHHHHHHHH---hCC-CEEEEeCCCHHHHHHHHHHcCcH-HhcC------eeEEecCChHHHHHHHHh-c-CCC
Confidence 367899999888886 233 68999999999999999875422 2343 333321111123443333 1 567
Q ss_pred cEEEEEcCCcc
Q 002166 340 KMALVIDDRLK 350 (957)
Q Consensus 340 ~mvVIIDDR~d 350 (957)
+-+++|+|+..
T Consensus 162 ~~~~~vgDs~~ 172 (231)
T 2p11_A 162 RHYVMVDDKLR 172 (231)
T ss_dssp SEEEEECSCHH
T ss_pred ceEEEEcCccc
Confidence 88999999973
No 100
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=97.01 E-value=0.00049 Score=73.84 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=34.4
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 302 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLD 302 (957)
+++||+.+++++|+ ++-|.++|.|++.+.++..+++.+.
T Consensus 179 ~l~pg~~e~L~~Lk---~~G~~v~IvSn~~~~~~~~~l~~lg 217 (317)
T 4eze_A 179 TLSPGLLTILPVIK---AKGFKTAIISGGLDIFTQRLKARYQ 217 (317)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHT
T ss_pred EECcCHHHHHHHHH---hCCCEEEEEeCccHHHHHHHHHHcC
Confidence 58899999888886 5569999999999999999999864
No 101
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.01 E-value=0.0017 Score=62.56 Aligned_cols=80 Identities=8% Similarity=-0.061 Sum_probs=54.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.+++.+.. ..| .+..+...
T Consensus 95 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 164 (230)
T 3um9_A 95 LTPFADVPQALQQLR---AAGLKTAILSNGSRHSIRQVVGNS-------GLTNSFDHLISVDEVRLFKPHQKVYELAMDT 164 (230)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHH-------TCGGGCSEEEEGGGTTCCTTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---hCCCeEEEEeCCCHHHHHHHHHHC-------CChhhcceeEehhhcccCCCChHHHHHHHHH
Confidence 356789999777775 445999999999999999998875 334456788887432 212 23333221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
....++-+++|+|+.
T Consensus 165 ~~~~~~~~~~iGD~~ 179 (230)
T 3um9_A 165 LHLGESEILFVSCNS 179 (230)
T ss_dssp HTCCGGGEEEEESCH
T ss_pred hCCCcccEEEEeCCH
Confidence 125677788889985
No 102
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=96.99 E-value=0.0017 Score=63.15 Aligned_cols=80 Identities=10% Similarity=-0.004 Sum_probs=53.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+|+.+++.++ +..| -+..+...
T Consensus 94 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 163 (232)
T 1zrn_A 94 LAPFSEVPDSLRELK---RRGLKLAILSNGSPQSIDAVVSHA-------GLRDGFDHLLSVDPVQVYKPDNRVYELAEQA 163 (232)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEESGGGTCCTTSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHhc-------ChHhhhheEEEecccCCCCCCHHHHHHHHHH
Confidence 357799999777776 456999999999999999998874 33445668887643 2111 22222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
....++-+++|+|+.
T Consensus 164 ~~~~~~~~~~iGD~~ 178 (232)
T 1zrn_A 164 LGLDRSAILFVASNA 178 (232)
T ss_dssp HTSCGGGEEEEESCH
T ss_pred cCCCcccEEEEeCCH
Confidence 125667788888875
No 103
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=96.99 E-value=0.0015 Score=61.87 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=52.7
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC-CCccccccccCeEEeccC-----------C---Ccc
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE-SNLINTKELLDRIVCVKS-----------G---SRK 326 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~-g~lFg~~~l~~RIisr~s-----------g---~~K 326 (957)
++|++.+++.+|+ ..-|.++|+|++.+.++..+++.+.=. ..+|. ..++...+ . ..+
T Consensus 83 ~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (219)
T 3kd3_A 83 LTDGIKELVQDLK---NKGFEIWIFSGGLSESIQPFADYLNIPRENIFA-----VETIWNSDGSFKELDNSNGACDSKLS 154 (219)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEE-----EEEEECTTSBEEEEECTTSTTTCHHH
T ss_pred CChhHHHHHHHHH---HCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEE-----eeeeecCCCceeccCCCCCCcccHHH
Confidence 6799999888886 456999999999999999999987643 23343 22222111 1 124
Q ss_pred chhhhccCCCCCCcEEEEEcCCc
Q 002166 327 SLFNVFQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 327 sL~~lfp~g~~~~~mvVIIDDR~ 349 (957)
.|...+. ..++-+++|+|+.
T Consensus 155 ~l~~~~~---~~~~~~~~vGD~~ 174 (219)
T 3kd3_A 155 AFDKAKG---LIDGEVIAIGDGY 174 (219)
T ss_dssp HHHHHGG---GCCSEEEEEESSH
T ss_pred HHHHHhC---CCCCCEEEEECCH
Confidence 4555554 5678899999985
No 104
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=96.98 E-value=0.0011 Score=62.43 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=31.2
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 302 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLD 302 (957)
+++|++.+++.+|+ ..-|.++|+|++.+.++..+ +.+.
T Consensus 79 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~-~~~~ 116 (201)
T 4ap9_A 79 NVSPEARELVETLR---EKGFKVVLISGSFEEVLEPF-KELG 116 (201)
T ss_dssp CCCHHHHHHHHHHH---HTTCEEEEEEEEETTTSGGG-TTTS
T ss_pred CCChhHHHHHHHHH---HCCCeEEEEeCCcHHHHHHH-HHcC
Confidence 67899999777776 45589999999999998877 7654
No 105
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=96.93 E-value=0.0033 Score=60.21 Aligned_cols=76 Identities=11% Similarity=0.019 Sum_probs=51.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~ 334 (957)
+++.|++.+ +..|+ .+ |.++|+|++.+.++..+++.+ +...+++.|++.++ +..| -+..+...
T Consensus 73 ~~~~~~~~~-l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 140 (201)
T 2w43_A 73 LKAYEDTKY-LKEIS---EI-AEVYALSNGSINEVKQHLERN-------GLLRYFKGIFSAESVKEYKPSPKVYKYFLDS 140 (201)
T ss_dssp CEECGGGGG-HHHHH---HH-SEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred cccCCChHH-HHHHH---hC-CeEEEEeCcCHHHHHHHHHHC-------CcHHhCcEEEehhhcCCCCCCHHHHHHHHHh
Confidence 467799999 88886 45 999999999999999998874 33455668887643 2112 22222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
. . ++-+++|+|+.
T Consensus 141 ~-~-~~~~~~vGD~~ 153 (201)
T 2w43_A 141 I-G-AKEAFLVSSNA 153 (201)
T ss_dssp H-T-CSCCEEEESCH
T ss_pred c-C-CCcEEEEeCCH
Confidence 1 1 45678888875
No 106
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=96.93 E-value=0.0021 Score=62.91 Aligned_cols=45 Identities=13% Similarity=-0.048 Sum_probs=36.7
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccc
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLIN 309 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg 309 (957)
+++||+.+++..|+ ..-+.++|.|++.+.++..+++.+.=+ .+|+
T Consensus 92 ~~~~g~~~~l~~l~---~~g~~~~ivS~~~~~~~~~~~~~~g~~-~~~~ 136 (232)
T 3fvv_A 92 SLTVQAVDVVRGHL---AAGDLCALVTATNSFVTAPIARAFGVQ-HLIA 136 (232)
T ss_dssp GCCHHHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTTCC-EEEE
T ss_pred hcCHHHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCCC-EEEE
Confidence 36899999877776 556999999999999999999997644 3454
No 107
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=96.92 E-value=0.0023 Score=62.02 Aligned_cols=81 Identities=14% Similarity=0.026 Sum_probs=52.3
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCc-HHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCC
Q 002166 259 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAE-RDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTC 337 (957)
Q Consensus 259 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGt-R~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~ 337 (957)
.+++.|++.++++.|+ ++-|.+.|+|++. +.++..+++.++-. .+|+.+++........+..++.....
T Consensus 66 ~~~~~~g~~e~L~~L~---~~G~~v~ivT~~~~~~~~~~~l~~~gl~-------~~f~~~~~~~~~k~~~~~~~~~~~~~ 135 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQ---SLGVPGAAASRTSEIEGANQLLELFDLF-------RYFVHREIYPGSKITHFERLQQKTGI 135 (187)
T ss_dssp EECCCTTHHHHHHHHH---HHTCCEEEEECCSCHHHHHHHHHHTTCT-------TTEEEEEESSSCHHHHHHHHHHHHCC
T ss_pred ccCcchhHHHHHHHHH---HCCceEEEEeCCCChHHHHHHHHHcCcH-------hhcceeEEEeCchHHHHHHHHHHcCC
Confidence 3567899999777775 4568999999999 89999999986432 33445544322222223333221125
Q ss_pred CCcEEEEEcCCc
Q 002166 338 HPKMALVIDDRL 349 (957)
Q Consensus 338 ~~~mvVIIDDR~ 349 (957)
.++-+++|||+.
T Consensus 136 ~~~~~~~igD~~ 147 (187)
T 2wm8_A 136 PFSQMIFFDDER 147 (187)
T ss_dssp CGGGEEEEESCH
T ss_pred ChHHEEEEeCCc
Confidence 667788999984
No 108
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=96.92 E-value=0.002 Score=63.96 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=53.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHP 339 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~ 339 (957)
+++.|++.+++.+|+ ..|.+.|+|++.+.++..+++.++ ...+|+.|++....+...+..++......+
T Consensus 111 ~~~~~~~~~~l~~l~----~~~~~~i~t~~~~~~~~~~l~~~~-------l~~~f~~i~~~~kp~~~~~~~~~~~l~~~~ 179 (251)
T 2pke_A 111 VEVIAGVREAVAAIA----ADYAVVLITKGDLFHQEQKIEQSG-------LSDLFPRIEVVSEKDPQTYARVLSEFDLPA 179 (251)
T ss_dssp CCBCTTHHHHHHHHH----TTSEEEEEEESCHHHHHHHHHHHS-------GGGTCCCEEEESCCSHHHHHHHHHHHTCCG
T ss_pred CCcCccHHHHHHHHH----CCCEEEEEeCCCHHHHHHHHHHcC-------cHHhCceeeeeCCCCHHHHHHHHHHhCcCc
Confidence 356799999777773 448999999999999999888743 334556777753222222333322112567
Q ss_pred cEEEEEcCCc
Q 002166 340 KMALVIDDRL 349 (957)
Q Consensus 340 ~mvVIIDDR~ 349 (957)
+-+++|+|+.
T Consensus 180 ~~~i~iGD~~ 189 (251)
T 2pke_A 180 ERFVMIGNSL 189 (251)
T ss_dssp GGEEEEESCC
T ss_pred hhEEEECCCc
Confidence 8899999986
No 109
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=96.91 E-value=0.004 Score=58.08 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=51.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~ 334 (957)
+.+.|++.+++.+|+ ..-+.+.|+|++.+.+.. +++.++ ....++.+++.++ +..| .+..+...
T Consensus 84 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~-~~~~~~-------~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 152 (207)
T 2go7_A 84 VVLMPGAREVLAWAD---ESGIQQFIYTHKGNNAFT-ILKDLG-------VESYFTEILTSQSGFVRKPSPEAATYLLDK 152 (207)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEECSSCTHHHH-HHHHHT-------CGGGEEEEECGGGCCCCTTSSHHHHHHHHH
T ss_pred ceeCcCHHHHHHHHH---HCCCeEEEEeCCchHHHH-HHHHcC-------chhheeeEEecCcCCCCCCCcHHHHHHHHH
Confidence 356799999877776 455899999999999998 887753 2334456766543 2112 23333221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
....++-++.|+|+.
T Consensus 153 ~~i~~~~~~~iGD~~ 167 (207)
T 2go7_A 153 YQLNSDNTYYIGDRT 167 (207)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred hCCCcccEEEECCCH
Confidence 125677888999874
No 110
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=96.91 E-value=0.0023 Score=63.58 Aligned_cols=80 Identities=19% Similarity=0.077 Sum_probs=54.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCe-EEeccC-C-Ccc----chhhhc
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDR-IVCVKS-G-SRK----SLFNVF 332 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~R-Iisr~s-g-~~K----sL~~lf 332 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.++ ...+|+. |++.+. + ..| .+..++
T Consensus 109 ~~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~~-------l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~ 178 (259)
T 4eek_A 109 VTAIEGAAETLRALR---AAGVPFAIGSNSERGRLHLKLRVAG-------LTELAGEHIYDPSWVGGRGKPHPDLYTFAA 178 (259)
T ss_dssp CEECTTHHHHHHHHH---HHTCCEEEECSSCHHHHHHHHHHTT-------CHHHHCSCEECGGGGTTCCTTSSHHHHHHH
T ss_pred CCcCccHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHhcC-------hHhhccceEEeHhhcCcCCCCChHHHHHHH
Confidence 467799999777776 4468999999999999999998853 3334445 776532 2 222 233333
Q ss_pred cCCCCCCcEEEEEcCCc
Q 002166 333 QDGTCHPKMALVIDDRL 349 (957)
Q Consensus 333 p~g~~~~~mvVIIDDR~ 349 (957)
......++-+++|+|+.
T Consensus 179 ~~lgi~~~~~i~iGD~~ 195 (259)
T 4eek_A 179 QQLGILPERCVVIEDSV 195 (259)
T ss_dssp HHTTCCGGGEEEEESSH
T ss_pred HHcCCCHHHEEEEcCCH
Confidence 32236778899999986
No 111
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=96.89 E-value=0.0029 Score=62.21 Aligned_cols=79 Identities=8% Similarity=0.033 Sum_probs=53.5
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~----KsL~~lfp~g 335 (957)
++.|++.+++..|+ ..-|.++|.|++.+.++..+++.+ +...+|+.|++.++. .. .-+..++...
T Consensus 105 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 174 (240)
T 2no4_A 105 SAYPDAAETLEKLK---SAGYIVAILSNGNDEMLQAALKAS-------KLDRVLDSCLSADDLKIYKPDPRIYQFACDRL 174 (240)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH---HCCCEEEEEcCCCHHHHHHHHHhc-------CcHHHcCEEEEccccCCCCCCHHHHHHHHHHc
Confidence 56799999777775 456999999999999999999874 334556788876432 11 1233332211
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
+..++-+++|+|+.
T Consensus 175 ~~~~~~~~~iGD~~ 188 (240)
T 2no4_A 175 GVNPNEVCFVSSNA 188 (240)
T ss_dssp TCCGGGEEEEESCH
T ss_pred CCCcccEEEEeCCH
Confidence 25667788889875
No 112
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=96.88 E-value=0.0015 Score=66.38 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=53.7
Q ss_pred EeeCcChHHHHHHHhhhccccE--EEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-----C----Cccch
Q 002166 260 VRLRPAWEDLRSYLTARGRKRF--EVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-----G----SRKSL 328 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~F--El~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-----g----~~KsL 328 (957)
+++.|++.+++..|+ ..-| .+.|+|++.+.++..+++.+. ...+|+.+++.+. + +...+
T Consensus 141 ~~~~p~~~~~L~~L~---~~g~~~~l~i~Tn~~~~~~~~~l~~~g-------l~~~fd~v~~~~~~~~~~~~~Kp~~~~~ 210 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLR---QSGKIDKLWLFTNAYKNHAIRCLRLLG-------IADLFDGLTYCDYSRTDTLVCKPHVKAF 210 (282)
T ss_dssp CCCCHHHHHHHHHHH---HSSSCSEEEEECSSCHHHHHHHHHHHT-------CTTSCSEEECCCCSSCSSCCCTTSHHHH
T ss_pred cCcChhHHHHHHHHH---hCCCCceEEEEECCChHHHHHHHHhCC-------cccccceEEEeccCCCcccCCCcCHHHH
Confidence 466799999777776 4567 999999999999999998854 3344556765422 1 11223
Q ss_pred hhhccCCCCCC-cEEEEEcCCc
Q 002166 329 FNVFQDGTCHP-KMALVIDDRL 349 (957)
Q Consensus 329 ~~lfp~g~~~~-~mvVIIDDR~ 349 (957)
..++...+..+ +-+++|+|+.
T Consensus 211 ~~~~~~lgi~~~~~~i~vGD~~ 232 (282)
T 3nuq_A 211 EKAMKESGLARYENAYFIDDSG 232 (282)
T ss_dssp HHHHHHHTCCCGGGEEEEESCH
T ss_pred HHHHHHcCCCCcccEEEEcCCH
Confidence 33332222666 8899999986
No 113
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=96.83 E-value=0.00048 Score=65.64 Aligned_cols=83 Identities=22% Similarity=0.203 Sum_probs=51.9
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhcc
Q 002166 259 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQ 333 (957)
Q Consensus 259 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp 333 (957)
++++.|++.+++..|+ ..-+.++|+|++.+.++..+++.+ ++...+++.|++.++ +..| -+..++.
T Consensus 89 ~~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~~~~~------~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 159 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLR---EQGHRVVVLSNTNRLHTTFWPEEY------PEIRDAADHIYLSQDLGMRKPEARIYQHVLQ 159 (206)
T ss_dssp EEEECHHHHHHHHHHH---HTTCEEEEEECCCCCTTSCCGGGC------HHHHHHCSEEEEHHHHTCCTTCHHHHHHHHH
T ss_pred hcccCccHHHHHHHHH---HCCCeEEEEECCChHHHHHHHHhc------cChhhheeeEEEecccCCCCCCHHHHHHHHH
Confidence 5688899999777775 456999999999988865544331 233344567777532 2111 2333332
Q ss_pred CCCCCCcEEEEEcCCcc
Q 002166 334 DGTCHPKMALVIDDRLK 350 (957)
Q Consensus 334 ~g~~~~~mvVIIDDR~d 350 (957)
..+..++-+++|+|+..
T Consensus 160 ~~~~~~~~~~~vgD~~~ 176 (206)
T 2b0c_A 160 AEGFSPSDTVFFDDNAD 176 (206)
T ss_dssp HHTCCGGGEEEEESCHH
T ss_pred HcCCCHHHeEEeCCCHH
Confidence 21256778888999763
No 114
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=96.77 E-value=0.0019 Score=65.27 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=55.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.+.|+|++.+. +..+++.+ +...+|+.|++.++ +..| -+..++..
T Consensus 105 ~~~~~~~~~~l~~l~---~~g~~~~i~tn~~~~-~~~~l~~~-------gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 173 (263)
T 3k1z_A 105 WQVLDGAEDTLRECR---TRGLRLAVISNFDRR-LEGILGGL-------GLREHFDFVLTSEAAGWPKPDPRIFQEALRL 173 (263)
T ss_dssp EEECTTHHHHHHHHH---HTTCEEEEEESCCTT-HHHHHHHT-------TCGGGCSCEEEHHHHSSCTTSHHHHHHHHHH
T ss_pred ceECcCHHHHHHHHH---hCCCcEEEEeCCcHH-HHHHHHhC-------CcHHhhhEEEeecccCCCCCCHHHHHHHHHH
Confidence 467899999777776 456999999998875 57777763 34455678887632 2222 13333222
Q ss_pred CCCCCcEEEEEcCCc--ccCCCC
Q 002166 335 GTCHPKMALVIDDRL--KVWDDK 355 (957)
Q Consensus 335 g~~~~~mvVIIDDR~--dVW~~~ 355 (957)
.+..++-+|+|+|+. ||-...
T Consensus 174 ~g~~~~~~~~vGD~~~~Di~~a~ 196 (263)
T 3k1z_A 174 AHMEPVVAAHVGDNYLCDYQGPR 196 (263)
T ss_dssp HTCCGGGEEEEESCHHHHTHHHH
T ss_pred cCCCHHHEEEECCCcHHHHHHHH
Confidence 125678899999994 675443
No 115
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=96.75 E-value=0.0012 Score=63.46 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=51.4
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc--------chhhh
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK--------SLFNV 331 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K--------sL~~l 331 (957)
++.|++.+++..|+ + .|.+.|+|++.+.++..+++.|+ .+ |+.|++.++ +..| .|+.
T Consensus 99 ~~~~~~~~~l~~l~-~---~~~~~i~tn~~~~~~~~~l~~l~---~~------fd~i~~~~~~~~~KP~~~~~~~~l~~- 164 (240)
T 3smv_A 99 PAFPDTVEALQYLK-K---HYKLVILSNIDRNEFKLSNAKLG---VE------FDHIITAQDVGSYKPNPNNFTYMIDA- 164 (240)
T ss_dssp CBCTTHHHHHHHHH-H---HSEEEEEESSCHHHHHHHHTTTC---SC------CSEEEEHHHHTSCTTSHHHHHHHHHH-
T ss_pred CCCCcHHHHHHHHH-h---CCeEEEEeCCChhHHHHHHHhcC---Cc------cCEEEEccccCCCCCCHHHHHHHHHH-
Confidence 56799999777776 2 49999999999999998887643 23 457777632 2211 2211
Q ss_pred ccCCCCCCcEEEEEcCCc--cc
Q 002166 332 FQDGTCHPKMALVIDDRL--KV 351 (957)
Q Consensus 332 fp~g~~~~~mvVIIDDR~--dV 351 (957)
+....+.++-+|+|+|+. |+
T Consensus 165 ~~~lgi~~~~~~~vGD~~~~Di 186 (240)
T 3smv_A 165 LAKAGIEKKDILHTAESLYHDH 186 (240)
T ss_dssp HHHTTCCGGGEEEEESCTTTTH
T ss_pred HHhcCCCchhEEEECCCchhhh
Confidence 211126778899998884 55
No 116
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=96.74 E-value=0.0028 Score=62.81 Aligned_cols=81 Identities=14% Similarity=0.074 Sum_probs=53.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-C----ccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-S----RKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~----~KsL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.+.|+|++.+.++..+++.+.-.+.+ ++.|++.+.. . ...+..+...
T Consensus 110 ~~~~~~~~~~l~~l~---~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~kp~~~~~~~~~~~ 180 (277)
T 3iru_A 110 SQLIPGWKEVFDKLI---AQGIKVGGNTGYGPGMMAPALIAAKEQGYT------PASTVFATDVVRGRPFPDMALKVALE 180 (277)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHHHTTCC------CSEEECGGGSSSCTTSSHHHHHHHHH
T ss_pred CccCcCHHHHHHHHH---HcCCeEEEEeCCchHHHHHHHHhcCcccCC------CceEecHHhcCCCCCCHHHHHHHHHH
Confidence 356789999777776 455899999999999999999875322211 3577776432 1 1223333322
Q ss_pred CCCCC-cEEEEEcCCc
Q 002166 335 GTCHP-KMALVIDDRL 349 (957)
Q Consensus 335 g~~~~-~mvVIIDDR~ 349 (957)
.+..+ +-+++|+|+.
T Consensus 181 lgi~~~~~~i~vGD~~ 196 (277)
T 3iru_A 181 LEVGHVNGCIKVDDTL 196 (277)
T ss_dssp HTCSCGGGEEEEESSH
T ss_pred cCCCCCccEEEEcCCH
Confidence 22567 7899999986
No 117
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=96.74 E-value=0.0031 Score=62.39 Aligned_cols=81 Identities=16% Similarity=0.048 Sum_probs=51.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEecc--CC-Cc----cchhhhc
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVK--SG-SR----KSLFNVF 332 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~--sg-~~----KsL~~lf 332 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++...+.- .++...+|+.+++.+ .- .. .-+..+.
T Consensus 111 ~~~~~~~~~~l~~l~---~~g~~~~i~sn~~~~~~~~~l~~------~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~ 181 (250)
T 3l5k_A 111 AALMPGAEKLIIHLR---KHGIPFALATSSRSASFDMKTSR------HKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACA 181 (250)
T ss_dssp CCBCTTHHHHHHHHH---HTTCCEEEECSCCHHHHHHHTTT------CHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---hCCCcEEEEeCCCHHHHHHHHHh------ccCHHhheeeEEecchhhccCCCCChHHHHHHH
Confidence 356799999777776 44589999999998877664421 123334456777665 32 11 2344444
Q ss_pred cCCCCCC--cEEEEEcCCc
Q 002166 333 QDGTCHP--KMALVIDDRL 349 (957)
Q Consensus 333 p~g~~~~--~mvVIIDDR~ 349 (957)
...+..+ +-+++|+|+.
T Consensus 182 ~~lgi~~~~~~~i~iGD~~ 200 (250)
T 3l5k_A 182 KRFSPPPAMEKCLVFEDAP 200 (250)
T ss_dssp HTSSSCCCGGGEEEEESSH
T ss_pred HHcCCCCCcceEEEEeCCH
Confidence 3323555 8899999986
No 118
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=96.72 E-value=0.0029 Score=61.41 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=47.2
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccCCC
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQDGT 336 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~K----sL~~lfp~g~ 336 (957)
+.|++.+++.+|+ ..-|.+.|+|++.+ +..+++.+ +...+|+.|++.++. ..| .+..++...+
T Consensus 93 ~~~~~~~~l~~l~---~~g~~~~i~t~~~~--~~~~l~~~-------gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lg 160 (233)
T 3nas_A 93 LLPGIGRLLCQLK---NENIKIGLASSSRN--APKILRRL-------AIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLD 160 (233)
T ss_dssp SCTTHHHHHHHHH---HTTCEEEECCSCTT--HHHHHHHT-------TCTTTCSEECCC---------CCHHHHHHHHHT
T ss_pred cCcCHHHHHHHHH---HCCCcEEEEcCchh--HHHHHHHc-------CcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcC
Confidence 5689999777776 45599999999966 67777764 333455667665432 112 2333332222
Q ss_pred CCCcEEEEEcCCc
Q 002166 337 CHPKMALVIDDRL 349 (957)
Q Consensus 337 ~~~~mvVIIDDR~ 349 (957)
..++-+|+|+|+.
T Consensus 161 i~~~~~i~vGDs~ 173 (233)
T 3nas_A 161 VSPADCAAIEDAE 173 (233)
T ss_dssp SCGGGEEEEECSH
T ss_pred CCHHHEEEEeCCH
Confidence 5678889999985
No 119
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=96.71 E-value=0.0016 Score=62.43 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=55.1
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhcc
Q 002166 259 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQ 333 (957)
Q Consensus 259 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp 333 (957)
++++.|++.+++..|+ . .|.++|+|++.+.++..+++.|-.. ..++...+++.+++.++ +..| -+..+..
T Consensus 87 ~~~~~~~~~~~l~~l~---~-g~~~~i~t~~~~~~~~~~~~~l~~~-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 161 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLR---P-DYRLFLLSNTNPYVLDLAMSPRFLP-SGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIA 161 (211)
T ss_dssp EEEECHHHHHHHHHHT---T-TSEEEEEECCCHHHHHHHTSTTSST-TCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHH
T ss_pred hcccChHHHHHHHHHH---c-CCeEEEEeCCCHHHHHHHHhhhccc-cccCHHHHcCeEEeecccCCCCCCHHHHHHHHH
Confidence 4578899999777776 2 6999999999999988777652110 00344456678877532 2111 2222222
Q ss_pred CCCCCCcEEEEEcCCcc
Q 002166 334 DGTCHPKMALVIDDRLK 350 (957)
Q Consensus 334 ~g~~~~~mvVIIDDR~d 350 (957)
..+..++-+++|+|+..
T Consensus 162 ~~~~~~~~~~~igD~~~ 178 (211)
T 2i6x_A 162 DSGMKPEETLFIDDGPA 178 (211)
T ss_dssp HHCCCGGGEEEECSCHH
T ss_pred HhCCChHHeEEeCCCHH
Confidence 11256788999999863
No 120
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=96.70 E-value=0.0037 Score=61.52 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=52.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.+.|+|++.+.++..+++. .-..+|.. +.|++.++. +...+..++..
T Consensus 108 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~----d~i~~~~~~~~~kp~~~~~~~~~~~ 178 (243)
T 3qxg_A 108 AERMPGAWELLQKVK---SEGLTPMVVTGSGQLSLLERLEH--NFPGMFHK----ELMVTAFDVKYGKPNPEPYLMALKK 178 (243)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECCCCCHHHHTTHHH--HSTTTCCG----GGEECTTTCSSCTTSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---HcCCcEEEEeCCcHHHHHHHHHH--hHHHhcCc----ceEEeHHhCCCCCCChHHHHHHHHH
Confidence 356799999777776 45599999999999988877764 22233410 466665432 11223333332
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.+..++-+|+|+|+.
T Consensus 179 lg~~~~~~i~vGD~~ 193 (243)
T 3qxg_A 179 GGLKADEAVVIENAP 193 (243)
T ss_dssp TTCCGGGEEEEECSH
T ss_pred cCCCHHHeEEEeCCH
Confidence 236778899999986
No 121
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=96.63 E-value=0.0044 Score=60.34 Aligned_cols=81 Identities=14% Similarity=0.155 Sum_probs=49.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~----KsL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.+.|+|++.+.++..+++. .-..+|.. +.|++.++. .. .-+..++..
T Consensus 107 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~----~~~~~~~~~~~~kp~~~~~~~~~~~ 177 (247)
T 3dv9_A 107 AERMPGALEVLTKIK---SEGLTPMVVTGSGQTSLLDRLNH--NFPGIFQA----NLMVTAFDVKYGKPNPEPYLMALKK 177 (247)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSCC---CHHHHHH--HSTTTCCG----GGEECGGGCSSCTTSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH---HcCCcEEEEcCCchHHHHHHHHh--hHHHhcCC----CeEEecccCCCCCCCCHHHHHHHHH
Confidence 356799999777776 45699999999999998888765 21233410 466665432 11 223333322
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.+..++-+++|+|+.
T Consensus 178 lg~~~~~~i~vGD~~ 192 (247)
T 3dv9_A 178 GGFKPNEALVIENAP 192 (247)
T ss_dssp HTCCGGGEEEEECSH
T ss_pred cCCChhheEEEeCCH
Confidence 225678899999986
No 122
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=96.62 E-value=0.0051 Score=61.37 Aligned_cols=78 Identities=12% Similarity=0.046 Sum_probs=52.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-C----CccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g----~~KsL~~lfp~ 334 (957)
+++.|++.+++..| . .|.++|.|++.+.++..+++.+ +...+|+.+++.++ + +...+..++..
T Consensus 92 ~~~~~~~~~~l~~l----~-g~~~~i~t~~~~~~~~~~l~~~-------gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 159 (253)
T 1qq5_A 92 LTPYPDAAQCLAEL----A-PLKRAILSNGAPDMLQALVANA-------GLTDSFDAVISVDAKRVFKPHPDSYALVEEV 159 (253)
T ss_dssp CCBCTTHHHHHHHH----T-TSEEEEEESSCHHHHHHHHHHT-------TCGGGCSEEEEGGGGTCCTTSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHH----c-CCCEEEEeCcCHHHHHHHHHHC-------CchhhccEEEEccccCCCCCCHHHHHHHHHH
Confidence 35779999955554 4 7999999999999999999885 33445668887643 2 11123333222
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
....++-+++|+|+.
T Consensus 160 ~~~~~~~~~~vGD~~ 174 (253)
T 1qq5_A 160 LGVTPAEVLFVSSNG 174 (253)
T ss_dssp HCCCGGGEEEEESCH
T ss_pred cCCCHHHEEEEeCCh
Confidence 125677788889875
No 123
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=96.56 E-value=0.006 Score=57.26 Aligned_cols=75 Identities=20% Similarity=0.240 Sum_probs=46.5
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccCCC
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQDGT 336 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp~g~ 336 (957)
+.|++.+++.+|+ ..-+.++|+|++. .++..+++.+ +....++.+++.++. ....+..+.....
T Consensus 83 ~~~~~~~~l~~l~---~~g~~~~i~t~~~-~~~~~~l~~~-------~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~ 151 (190)
T 2fi1_A 83 LFEGVSDLLEDIS---NQGGRHFLVSHRN-DQVLEILEKT-------SIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ 151 (190)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEECSSC-THHHHHHHHT-------TCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTT
T ss_pred cCcCHHHHHHHHH---HCCCcEEEEECCc-HHHHHHHHHc-------CCHhheeeeeeccccCCCCCCHHHHHHHHHHcC
Confidence 6799999777776 4459999999886 4777777764 333445567765321 1222333332211
Q ss_pred CCCcEEEEEcCCc
Q 002166 337 CHPKMALVIDDRL 349 (957)
Q Consensus 337 ~~~~mvVIIDDR~ 349 (957)
.. -++.|+|+.
T Consensus 152 ~~--~~~~iGD~~ 162 (190)
T 2fi1_A 152 IS--SGLVIGDRP 162 (190)
T ss_dssp CS--SEEEEESSH
T ss_pred CC--eEEEEcCCH
Confidence 33 678888874
No 124
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=96.48 E-value=0.0048 Score=62.03 Aligned_cols=73 Identities=12% Similarity=0.155 Sum_probs=50.9
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc--------cchhhh
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR--------KSLFNV 331 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~--------KsL~~l 331 (957)
++.||+.+++..|+ ...+-+.|.|++.+ +..+++. ++...+|+.|++.++. .. +.++++
T Consensus 95 ~~~pg~~~ll~~L~---~~g~~i~i~t~~~~--~~~~l~~-------~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~l 162 (243)
T 4g9b_A 95 AVLPGIRSLLADLR---AQQISVGLASVSLN--APTILAA-------LELREFFTFCADASQLKNSKPDPEIFLAACAGL 162 (243)
T ss_dssp GBCTTHHHHHHHHH---HTTCEEEECCCCTT--HHHHHHH-------TTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHH
T ss_pred cccccHHHHHHhhh---cccccceecccccc--hhhhhhh-------hhhccccccccccccccCCCCcHHHHHHHHHHc
Confidence 45699999888887 56788889998765 5666766 4555677788887542 22 233333
Q ss_pred ccCCCCCCcEEEEEcCCc
Q 002166 332 FQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 332 fp~g~~~~~mvVIIDDR~ 349 (957)
++.++-+|+|+|+.
T Consensus 163 ----g~~p~e~l~VgDs~ 176 (243)
T 4g9b_A 163 ----GVPPQACIGIEDAQ 176 (243)
T ss_dssp ----TSCGGGEEEEESSH
T ss_pred ----CCChHHEEEEcCCH
Confidence 26788899999984
No 125
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=96.40 E-value=0.012 Score=58.84 Aligned_cols=71 Identities=15% Similarity=0.160 Sum_probs=48.4
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-CccchhhhccCCCCCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRKSLFNVFQDGTCHP 339 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~KsL~~lfp~g~~~~ 339 (957)
+++|++.+++..|+ ..-+.+.|+|++.+.++..+++.+.- ..++..|++.+.. ..|.+...+
T Consensus 144 ~~~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~gl-------~~~f~~~~~~~k~~~~k~~~~~~------- 206 (280)
T 3skx_A 144 RIRPESREAISKLK---AIGIKCMMLTGDNRFVAKWVAEELGL-------DDYFAEVLPHEKAEKVKEVQQKY------- 206 (280)
T ss_dssp EECTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHTC-------SEEECSCCGGGHHHHHHHHHTTS-------
T ss_pred CCCHhHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCC-------hhHhHhcCHHHHHHHHHHHHhcC-------
Confidence 89999999888886 45689999999999999999998642 3344455554322 223333322
Q ss_pred cEEEEEcCCc
Q 002166 340 KMALVIDDRL 349 (957)
Q Consensus 340 ~mvVIIDDR~ 349 (957)
-++.|.|+.
T Consensus 207 -~~~~vGD~~ 215 (280)
T 3skx_A 207 -VTAMVGDGV 215 (280)
T ss_dssp -CEEEEECTT
T ss_pred -CEEEEeCCc
Confidence 357777763
No 126
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=96.33 E-value=0.0025 Score=62.47 Aligned_cols=77 Identities=12% Similarity=0.105 Sum_probs=51.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-C----CccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g----~~KsL~~lfp~ 334 (957)
+++.|++.+++..|+ +.|.+.|+|++.+.++..+++.+.-. |+.|++.+. + ...-+..++..
T Consensus 119 ~~~~~~~~~~l~~l~----~~~~~~i~s~~~~~~~~~~l~~~g~~---------f~~~~~~~~~~~~kp~~~~~~~~~~~ 185 (254)
T 3umc_A 119 LRPWPDTLAGMHALK----ADYWLAALSNGNTALMLDVARHAGLP---------WDMLLCADLFGHYKPDPQVYLGACRL 185 (254)
T ss_dssp CEECTTHHHHHHHHT----TTSEEEECCSSCHHHHHHHHHHHTCC---------CSEECCHHHHTCCTTSHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH----hcCeEEEEeCCCHHHHHHHHHHcCCC---------cceEEeecccccCCCCHHHHHHHHHH
Confidence 466799999666665 24999999999999999999886432 356766532 1 11223333221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.+..++-+++|+|+.
T Consensus 186 lgi~~~~~~~iGD~~ 200 (254)
T 3umc_A 186 LDLPPQEVMLCAAHN 200 (254)
T ss_dssp HTCCGGGEEEEESCH
T ss_pred cCCChHHEEEEcCch
Confidence 125678889999974
No 127
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.33 E-value=0.0048 Score=67.64 Aligned_cols=41 Identities=17% Similarity=0.037 Sum_probs=35.2
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE 304 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~ 304 (957)
+++||+.++++.|+ +.-|.++|.|+|.+.++..+++.+.=+
T Consensus 256 ~~~pg~~e~l~~Lk---~~G~~~~ivS~~~~~~~~~~~~~lgl~ 296 (415)
T 3p96_A 256 ELMPGARTTLRTLR---RLGYACGVVSGGFRRIIEPLAEELMLD 296 (415)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHTTCS
T ss_pred ccCccHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHcCcc
Confidence 68899999877776 456999999999999999999997543
No 128
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=96.28 E-value=0.0029 Score=61.51 Aligned_cols=77 Identities=10% Similarity=0.025 Sum_probs=51.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-C----CccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-G----SRKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g----~~KsL~~lfp~ 334 (957)
+++.|++.+++..|+ .. |.+.|+|++.+.++..+++.+.-. | +.+++.+. + +...+..++..
T Consensus 115 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~~~~~~l~~~~~~---f------~~~~~~~~~~~~kp~~~~~~~~~~~ 181 (254)
T 3umg_A 115 LTPWPDSVPGLTAIK---AE-YIIGPLSNGNTSLLLDMAKNAGIP---W------DVIIGSDINRKYKPDPQAYLRTAQV 181 (254)
T ss_dssp CCBCTTHHHHHHHHH---HH-SEEEECSSSCHHHHHHHHHHHTCC---C------SCCCCHHHHTCCTTSHHHHHHHHHH
T ss_pred CcCCcCHHHHHHHHH---hC-CeEEEEeCCCHHHHHHHHHhCCCC---e------eEEEEcCcCCCCCCCHHHHHHHHHH
Confidence 356789999777775 23 999999999999999999987432 3 45555432 1 12223333332
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.+..++-+++|+|+.
T Consensus 182 lgi~~~~~~~iGD~~ 196 (254)
T 3umg_A 182 LGLHPGEVMLAAAHN 196 (254)
T ss_dssp TTCCGGGEEEEESCH
T ss_pred cCCChHHEEEEeCCh
Confidence 225678889999875
No 129
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.0079 Score=61.30 Aligned_cols=79 Identities=14% Similarity=0.064 Sum_probs=51.2
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----Cccchhhhcc
Q 002166 260 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQ 333 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp 333 (957)
+++.|++.+++..|+ .. .+.+.|+|++.+.++..+++.++-. .| +.+++.++. ....+..+..
T Consensus 113 ~~~~~g~~~~L~~l~---~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f------~~i~~~~~~~~~kp~~~~~~~~~~ 181 (275)
T 2qlt_A 113 SIEVPGAVKLCNALN---ALPKEKWAVATSGTRDMAKKWFDILKIK--RP------EYFITANDVKQGKPHPEPYLKGRN 181 (275)
T ss_dssp CEECTTHHHHHHHHH---TSCGGGEEEECSSCHHHHHHHHHHHTCC--CC------SSEECGGGCSSCTTSSHHHHHHHH
T ss_pred CCcCcCHHHHHHHHH---hccCCeEEEEeCCCHHHHHHHHHHcCCC--cc------CEEEEcccCCCCCCChHHHHHHHH
Confidence 356799999777775 33 5889999999999999999886532 13 456665431 1112333322
Q ss_pred CCCC-------CCcEEEEEcCCc
Q 002166 334 DGTC-------HPKMALVIDDRL 349 (957)
Q Consensus 334 ~g~~-------~~~mvVIIDDR~ 349 (957)
.... .++-+++|+|+.
T Consensus 182 ~lgi~~~~~~~~~~~~i~~GDs~ 204 (275)
T 2qlt_A 182 GLGFPINEQDPSKSKVVVFEDAP 204 (275)
T ss_dssp HTTCCCCSSCGGGSCEEEEESSH
T ss_pred HcCCCccccCCCcceEEEEeCCH
Confidence 1124 567788898875
No 130
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=96.02 E-value=0.014 Score=58.68 Aligned_cols=77 Identities=13% Similarity=0.178 Sum_probs=47.9
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~K----sL~~lfp~g 335 (957)
++.|++.+++.+|+ ...+-+.+.|+. ..+..+++. ++...+|+-|++.++. ..| -+..++...
T Consensus 116 ~~~p~~~~ll~~Lk---~~g~~i~i~~~~--~~~~~~L~~-------~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~l 183 (250)
T 4gib_A 116 DILPGIESLLIDVK---SNNIKIGLSSAS--KNAINVLNH-------LGISDKFDFIADAGKCKNNKPHPEIFLMSAKGL 183 (250)
T ss_dssp GSCTTHHHHHHHHH---HTTCEEEECCSC--TTHHHHHHH-------HTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHH
T ss_pred ccchhHHHHHHHHH---hccccccccccc--chhhhHhhh-------cccccccceeecccccCCCCCcHHHHHHHHHHh
Confidence 45699999888887 455566665544 456777776 4455667788887542 222 122222111
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
.+.++-+|+|+|+.
T Consensus 184 g~~p~e~l~VGDs~ 197 (250)
T 4gib_A 184 NVNPQNCIGIEDAS 197 (250)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCChHHeEEECCCH
Confidence 25778899999985
No 131
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=95.91 E-value=0.023 Score=54.80 Aligned_cols=77 Identities=17% Similarity=0.297 Sum_probs=48.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ .. |.+.|+|++.+. ++ .++...+|+.|++.+. +..| .+..++..
T Consensus 104 ~~~~~~~~~~l~~l~---~~-~~~~i~t~~~~~-----l~-------~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (230)
T 3vay_A 104 VQIFPEVQPTLEILA---KT-FTLGVITNGNAD-----VR-------RLGLADYFAFALCAEDLGIGKPDPAPFLEALRR 167 (230)
T ss_dssp CCBCTTHHHHHHHHH---TT-SEEEEEESSCCC-----GG-------GSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHH
T ss_pred CccCcCHHHHHHHHH---hC-CeEEEEECCchh-----hh-------hcCcHHHeeeeEEccccCCCCcCHHHHHHHHHH
Confidence 456799999666665 33 999999999876 12 2344566778888642 2222 23333322
Q ss_pred CCCCCcEEEEEcCCc--ccC
Q 002166 335 GTCHPKMALVIDDRL--KVW 352 (957)
Q Consensus 335 g~~~~~mvVIIDDR~--dVW 352 (957)
.+..++-+++|+|+. |+-
T Consensus 168 ~~~~~~~~~~vGD~~~~Di~ 187 (230)
T 3vay_A 168 AKVDASAAVHVGDHPSDDIA 187 (230)
T ss_dssp HTCCGGGEEEEESCTTTTHH
T ss_pred hCCCchheEEEeCChHHHHH
Confidence 226778899999985 563
No 132
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=95.60 E-value=0.025 Score=58.62 Aligned_cols=79 Identities=10% Similarity=0.224 Sum_probs=49.2
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC----CCccccccccCeEEeccC-CC-------ccc
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE----SNLINTKELLDRIVCVKS-GS-------RKS 327 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~----g~lFg~~~l~~RIisr~s-g~-------~Ks 327 (957)
+++.||+.+ +|+ . .|.++|+|++.+..+..+++.+... -..++...++..+++..- +. .+.
T Consensus 124 ~~~~pgv~e---~L~-~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a 196 (253)
T 2g80_A 124 APVYADAID---FIK-R---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANI 196 (253)
T ss_dssp BCCCHHHHH---HHH-H---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHH
T ss_pred CCCCCCHHH---HHH-c---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHH
Confidence 466799988 887 3 6899999999999999998875321 011222233444443211 21 122
Q ss_pred hhhhccCCCCCCcEEEEEcCCc
Q 002166 328 LFNVFQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 328 L~~lfp~g~~~~~mvVIIDDR~ 349 (957)
++++ . +.++-+|+|+|+.
T Consensus 197 ~~~l-g---~~p~~~l~vgDs~ 214 (253)
T 2g80_A 197 LRDI-G---AKASEVLFLSDNP 214 (253)
T ss_dssp HHHH-T---CCGGGEEEEESCH
T ss_pred HHHc-C---CCcccEEEEcCCH
Confidence 3332 2 5678899999985
No 133
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=95.15 E-value=0.0064 Score=57.57 Aligned_cols=40 Identities=13% Similarity=-0.053 Sum_probs=32.9
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 303 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP 303 (957)
++.|++.+++.+|+ ..-+.+.|+|.+.+.++..+++.+.-
T Consensus 76 ~l~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~~~ 115 (211)
T 1l7m_A 76 TPTEGAEETIKELK---NRGYVVAVVSGGFDIAVNKIKEKLGL 115 (211)
T ss_dssp CBCTTHHHHHHHHH---HTTEEEEEEEEEEHHHHHHHHHHHTC
T ss_pred CCCccHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHcCC
Confidence 45689999888886 45699999999999999888887654
No 134
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=95.13 E-value=0.01 Score=58.91 Aligned_cols=74 Identities=7% Similarity=0.021 Sum_probs=44.7
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cccc----hhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRKS----LFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~Ks----L~~lfp~g 335 (957)
++.||+.+++.+|+ .+-|.+.|.|+..+..+..+. . .+| +.|+|.++. ..|- +...+...
T Consensus 36 ~~~pg~~e~L~~L~---~~g~~~~i~T~~~~~~~~~~~---~---~~~------d~v~~~~~~~~~KP~p~~~~~a~~~l 100 (196)
T 2oda_A 36 QLTPGAQNALKALR---DQGMPCAWIDELPEALSTPLA---A---PVN------DWMIAAPRPTAGWPQPDACWMALMAL 100 (196)
T ss_dssp SBCTTHHHHHHHHH---HHTCCEEEECCSCHHHHHHHH---T---TTT------TTCEECCCCSSCTTSTHHHHHHHHHT
T ss_pred CcCcCHHHHHHHHH---HCCCEEEEEcCChHHHHHHhc---C---ccC------CEEEECCcCCCCCCChHHHHHHHHHc
Confidence 45699999888886 456889999999998885444 3 233 467776432 2221 12221111
Q ss_pred CCCC-cEEEEEcCCc
Q 002166 336 TCHP-KMALVIDDRL 349 (957)
Q Consensus 336 ~~~~-~mvVIIDDR~ 349 (957)
...+ +-+|+|+|+.
T Consensus 101 ~~~~~~~~v~VGDs~ 115 (196)
T 2oda_A 101 NVSQLEGCVLISGDP 115 (196)
T ss_dssp TCSCSTTCEEEESCH
T ss_pred CCCCCccEEEEeCCH
Confidence 1333 5677888874
No 135
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=95.05 E-value=0.035 Score=58.75 Aligned_cols=42 Identities=14% Similarity=0.129 Sum_probs=35.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE 304 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~ 304 (957)
++++|++.+++..|+ ..-|.+.|.|++.+.++..+++.+.=+
T Consensus 177 ~~~~pg~~~~l~~L~---~~g~~~~ivS~~~~~~~~~~~~~lgl~ 218 (335)
T 3n28_A 177 LPLMPELPELVATLH---AFGWKVAIASGGFTYFSDYLKEQLSLD 218 (335)
T ss_dssp CCCCTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred CCcCcCHHHHHHHHH---HCCCEEEEEeCCcHHHHHHHHHHcCCC
Confidence 357899999888886 456999999999999999999987643
No 136
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=94.95 E-value=0.047 Score=51.19 Aligned_cols=74 Identities=8% Similarity=-0.049 Sum_probs=45.3
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcE
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKM 341 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~~m 341 (957)
+.|+..++++.|+ +.-+.++|+|++.+.++..+++.+.-+ .+|. . .+. ....+..++......++-
T Consensus 37 ~~~~~~~~l~~l~---~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~~~-----~----~kp-~~~~~~~~~~~~~~~~~~ 102 (162)
T 2p9j_A 37 FNVLDGIGIKLLQ---KMGITLAVISGRDSAPLITRLKELGVE-EIYT-----G----SYK-KLEIYEKIKEKYSLKDEE 102 (162)
T ss_dssp EEHHHHHHHHHHH---TTTCEEEEEESCCCHHHHHHHHHTTCC-EEEE-----C----C---CHHHHHHHHHHTTCCGGG
T ss_pred ecccHHHHHHHHH---HCCCEEEEEeCCCcHHHHHHHHHcCCH-hhcc-----C----CCC-CHHHHHHHHHHcCCCHHH
Confidence 3466678666775 456999999999999999999986533 2332 1 111 112222222211245677
Q ss_pred EEEEcCCc
Q 002166 342 ALVIDDRL 349 (957)
Q Consensus 342 vVIIDDR~ 349 (957)
+++|+|+.
T Consensus 103 ~~~vGD~~ 110 (162)
T 2p9j_A 103 IGFIGDDV 110 (162)
T ss_dssp EEEEECSG
T ss_pred EEEECCCH
Confidence 88888875
No 137
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=94.25 E-value=0.032 Score=54.15 Aligned_cols=85 Identities=11% Similarity=0.075 Sum_probs=57.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcH---HHHHHHHHhhCCCCCccccccccCeEEeccC-----CCccc----
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAER---DYALEMWRLLDPESNLINTKELLDRIVCVKS-----GSRKS---- 327 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR---~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-----g~~Ks---- 327 (957)
+++.||+.++++.|+ ..-|.+.|+|++.+ .++..+++. ++...+|+.|++.++ +..|.
T Consensus 33 ~~~~~g~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~~~~l~~-------~gl~~~fd~i~~~~~~~~~~~~~KP~p~~ 102 (189)
T 3ib6_A 33 VVLRKNAKETLEKVK---QLGFKQAILSNTATSDTEVIKRVLTN-------FGIIDYFDFIYASNSELQPGKMEKPDKTI 102 (189)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEEECCSSCCHHHHHHHHHH-------TTCGGGEEEEEECCTTSSTTCCCTTSHHH
T ss_pred ceeCcCHHHHHHHHH---HCCCEEEEEECCCccchHHHHHHHHh-------cCchhheEEEEEccccccccCCCCcCHHH
Confidence 356799999777776 45699999999987 888888887 444556678888753 32222
Q ss_pred hhhhccCCCCCCcEEEEEcCC--cccCCC
Q 002166 328 LFNVFQDGTCHPKMALVIDDR--LKVWDD 354 (957)
Q Consensus 328 L~~lfp~g~~~~~mvVIIDDR--~dVW~~ 354 (957)
+..++....+.++-+++|+|+ .|+...
T Consensus 103 ~~~~~~~~~~~~~~~l~VGD~~~~Di~~A 131 (189)
T 3ib6_A 103 FDFTLNALQIDKTEAVMVGNTFESDIIGA 131 (189)
T ss_dssp HHHHHHHHTCCGGGEEEEESBTTTTHHHH
T ss_pred HHHHHHHcCCCcccEEEECCCcHHHHHHH
Confidence 222222112567889999998 466433
No 138
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=94.21 E-value=0.12 Score=55.69 Aligned_cols=78 Identities=18% Similarity=0.141 Sum_probs=45.8
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCC------cHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----ch
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMA------ERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SL 328 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG------tR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL 328 (957)
+++.|++.+++..|+ .+-|.+.|+|++ .+........-|+ .+|+.|++.++ +..| -+
T Consensus 99 ~~~~~~~~~~L~~L~---~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~---------~~fd~i~~~~~~~~~KP~p~~~ 166 (555)
T 3i28_A 99 RKINRPMLQAALMLR---KKGFTTAILTNTWLDDRAERDGLAQLMCELK---------MHFDFLIESCQVGMVKPEPQIY 166 (555)
T ss_dssp CEECHHHHHHHHHHH---HTTCEEEEEECCCCCCSTTHHHHHHHHHHHH---------TTSSEEEEHHHHTCCTTCHHHH
T ss_pred cCcChhHHHHHHHHH---HCCCEEEEEeCCCccccchhhHHHHHhhhhh---------hheeEEEeccccCCCCCCHHHH
Confidence 367799999777775 455999999999 5555444432222 23457777632 2211 12
Q ss_pred hhhccCCCCCCcEEEEEcCCc
Q 002166 329 FNVFQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 329 ~~lfp~g~~~~~mvVIIDDR~ 349 (957)
..++...+..++-+++|||+.
T Consensus 167 ~~~~~~lg~~p~~~~~v~D~~ 187 (555)
T 3i28_A 167 KFLLDTLKASPSEVVFLDDIG 187 (555)
T ss_dssp HHHHHHHTCCGGGEEEEESCH
T ss_pred HHHHHHcCCChhHEEEECCcH
Confidence 222211125677788889984
No 139
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=94.13 E-value=0.079 Score=51.28 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=31.6
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhh
Q 002166 260 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLL 301 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmGtR~YA~~I~rlL 301 (957)
+++.||+.+++..|+ .. -|.++|.|++.+.++..+++.+
T Consensus 72 ~~~~~g~~e~L~~L~---~~~g~~~~ivT~~~~~~~~~~l~~~ 111 (193)
T 2i7d_A 72 LEPIPGALDAVREMN---DLPDTQVFICTSPLLKYHHCVGEKY 111 (193)
T ss_dssp CCBCTTHHHHHHHHH---TSTTEEEEEEECCCSSCTTTHHHHH
T ss_pred CccCcCHHHHHHHHH---hCCCCeEEEEeCCChhhHHHHHHHh
Confidence 357799999777665 44 6999999999999988888774
No 140
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=93.66 E-value=0.069 Score=55.90 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=27.5
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCc---HHHHHHHHHhh
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAE---RDYALEMWRLL 301 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGt---R~YA~~I~rlL 301 (957)
++-||+.+++..|. .+-+.+.|+|+.. +......++.+
T Consensus 101 ~~~pg~~e~L~~L~---~~Gi~i~iaTnr~~~~~~~~~~~L~~~ 141 (258)
T 2i33_A 101 EALPGSIDFLKYTE---SKGVDIYYISNRKTNQLDATIKNLERV 141 (258)
T ss_dssp EECTTHHHHHHHHH---HTTCEEEEEEEEEGGGHHHHHHHHHHH
T ss_pred CcCccHHHHHHHHH---HCCCEEEEEcCCchhHHHHHHHHHHHc
Confidence 34589999777776 5669999999998 45555555554
No 141
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=93.62 E-value=0.086 Score=51.33 Aligned_cols=39 Identities=10% Similarity=0.192 Sum_probs=30.7
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhh
Q 002166 260 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLL 301 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmGtR~YA~~I~rlL 301 (957)
+++.||+.+++..|+ .+ -|.+.|.|++.+.++..+++.+
T Consensus 74 ~~~~~g~~e~L~~L~---~~~g~~~~ivT~~~~~~~~~~l~~~ 113 (197)
T 1q92_A 74 LEPLPGAVEAVKEMA---SLQNTDVFICTSPIKMFKYCPYEKY 113 (197)
T ss_dssp CCBCTTHHHHHHHHH---HSTTEEEEEEECCCSCCSSHHHHHH
T ss_pred CCcCcCHHHHHHHHH---hcCCCeEEEEeCCccchHHHHHHHh
Confidence 457799999777776 44 6999999999998877666543
No 142
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=93.10 E-value=0.12 Score=55.16 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=43.2
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcH----HHHHHHHHhhCCCCCcccccccc-CeEEeccCCCcc--chhhhccC
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAER----DYALEMWRLLDPESNLINTKELL-DRIVCVKSGSRK--SLFNVFQD 334 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR----~YA~~I~rlLDP~g~lFg~~~l~-~RIisr~sg~~K--sL~~lfp~ 334 (957)
+-||+.+|+.+|. +.-+.|+|.|+-.. .....-++.+ |-- ... +.|+.+.+..-| .+..|...
T Consensus 102 ~~pG~~ell~~L~---~~G~ki~ivTgR~~~~~r~~T~~~L~~l---Gi~----~~~~~~Lilr~~~~~K~~~r~~l~~~ 171 (262)
T 3ocu_A 102 AVPGAVEFNNYVN---SHNGKVFYVTNRKDSTEKSGTIDDMKRL---GFN----GVEESAFYLKKDKSAKAARFAEIEKQ 171 (262)
T ss_dssp ECTTHHHHHHHHH---HTTEEEEEEEEEETTTTHHHHHHHHHHH---TCS----CCSGGGEEEESSCSCCHHHHHHHHHT
T ss_pred CCccHHHHHHHHH---HCCCeEEEEeCCCccchHHHHHHHHHHc---CcC----cccccceeccCCCCChHHHHHHHHhc
Confidence 4489999777776 67799999998754 4555555553 221 111 267766433222 23334332
Q ss_pred CCCCCcEEEEEcCC
Q 002166 335 GTCHPKMALVIDDR 348 (957)
Q Consensus 335 g~~~~~mvVIIDDR 348 (957)
| -+.++.|+|.
T Consensus 172 G---y~iv~~vGD~ 182 (262)
T 3ocu_A 172 G---YEIVLYVGDN 182 (262)
T ss_dssp T---EEEEEEEESS
T ss_pred C---CCEEEEECCC
Confidence 1 3567888776
No 143
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=93.07 E-value=0.16 Score=47.02 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=42.1
Q ss_pred CChhHHHHHHhhhcC------CceeeeecCCCCCCCCCCccEEEEEEECC-----EEEeecccCCHHHHHHHHHHHHHHH
Q 002166 837 MGSVSALKELCMTEG------LGVVFQQQPPSSANSVQKDEVYAQVEIDG-----QVLGKGIGSTWDEAKMQAAEKALGS 905 (957)
Q Consensus 837 ~NpVglLNELcqkeG------L~v~f~~~~~~~sGp~h~keF~~qV~IgG-----kvyG~G~G~SKKeAKqqAAk~AL~s 905 (957)
.|-|++||+||++-- +...|.-+++ ......| |+|..=. .+.|.-. +||+.||+.||-+|+.+
T Consensus 4 ~sAi~lL~~yC~~Lp~d~~~~~~P~~~~~~~----~~~~~~~-c~v~LP~~splr~i~g~~~-~sk~~AK~sAAf~Ac~~ 77 (102)
T 2kou_A 4 GSSISMMYKYCSRLPHDEFFQPKPEFQFKPV----DEFGGTI-CRITLPANAPISEIESSLL-PSTEAAKKDACLKAVHE 77 (102)
T ss_dssp SHHHHHHHHHHTTSSSCTTCCSSCEEEEEEC----CGGGCEE-EEEECCTTCSSCCEEEEEE-SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCccceEEEeEe----ecCCCeE-EEEECCCCCCCCeeeCCcc-ccHHHHHHHHHHHHHHH
Confidence 478999999998432 1122221100 0011234 6665532 4455555 99999999999999999
Q ss_pred Hhhc
Q 002166 906 LRSM 909 (957)
Q Consensus 906 L~s~ 909 (957)
|+.+
T Consensus 78 L~~~ 81 (102)
T 2kou_A 78 LHNL 81 (102)
T ss_dssp HHHH
T ss_pred HHHC
Confidence 9965
No 144
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=92.81 E-value=0.081 Score=51.28 Aligned_cols=66 Identities=9% Similarity=0.098 Sum_probs=42.0
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEEEEcCC
Q 002166 269 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDR 348 (957)
Q Consensus 269 Lr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~~mvVIIDDR 348 (957)
++..|+ ..-+.+.|.|.+.+.++..+++.+.=+ +|. . .......|..+.......++-++.|.|+
T Consensus 47 ~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~-----~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~ 111 (176)
T 3mmz_A 47 GIAALR---KSGLTMLILSTEQNPVVAARARKLKIP--VLH-----G-----IDRKDLALKQWCEEQGIAPERVLYVGND 111 (176)
T ss_dssp HHHHHH---HTTCEEEEEESSCCHHHHHHHHHHTCC--EEE-----S-----CSCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHH---HCCCeEEEEECcChHHHHHHHHHcCCe--eEe-----C-----CCChHHHHHHHHHHcCCCHHHEEEEcCC
Confidence 455776 556899999999999999999997655 444 1 1112222333332212455667778877
Q ss_pred c
Q 002166 349 L 349 (957)
Q Consensus 349 ~ 349 (957)
.
T Consensus 112 ~ 112 (176)
T 3mmz_A 112 V 112 (176)
T ss_dssp G
T ss_pred H
Confidence 4
No 145
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=92.37 E-value=0.11 Score=51.19 Aligned_cols=83 Identities=18% Similarity=0.278 Sum_probs=56.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCccc----hhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRKS----LFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~Ks----L~~lfp~ 334 (957)
+++.|++.+++.+|+ ..-|.++|+|++.+.++..+++.+ +...+|+.+++.+. +..|. +..+...
T Consensus 93 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 162 (241)
T 2hoq_A 93 LREVPGARKVLIRLK---ELGYELGIITDGNPVKQWEKILRL-------ELDDFFEHVIISDFEGVKKPHPKIFKKALKA 162 (241)
T ss_dssp CCBCTTHHHHHHHHH---HHTCEEEEEECSCHHHHHHHHHHT-------TCGGGCSEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH---HCCCEEEEEECCCchhHHHHHHHc-------CcHhhccEEEEeCCCCCCCCCHHHHHHHHHH
Confidence 456799999777776 445899999999999999999885 33455678887643 22222 2322221
Q ss_pred CCCCCcEEEEEcCCc--ccC
Q 002166 335 GTCHPKMALVIDDRL--KVW 352 (957)
Q Consensus 335 g~~~~~mvVIIDDR~--dVW 352 (957)
.+..++-+++|+|+. |+-
T Consensus 163 ~g~~~~~~i~iGD~~~~Di~ 182 (241)
T 2hoq_A 163 FNVKPEEALMVGDRLYSDIY 182 (241)
T ss_dssp HTCCGGGEEEEESCTTTTHH
T ss_pred cCCCcccEEEECCCchHhHH
Confidence 125677899999985 453
No 146
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=92.07 E-value=0.25 Score=47.76 Aligned_cols=78 Identities=13% Similarity=0.234 Sum_probs=49.9
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCC---------------cHHHHHHHHHhhCCCCCccccccccCeE-Ee----
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMA---------------ERDYALEMWRLLDPESNLINTKELLDRI-VC---- 319 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmG---------------tR~YA~~I~rlLDP~g~lFg~~~l~~RI-is---- 319 (957)
+++.|++.+++..|+ .+-|.+.|+|++ .+.++..+++.++-. | +.| +|
T Consensus 41 ~~~~pg~~e~L~~L~---~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f------d~v~~s~~~~ 108 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQ---KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---F------DEVLICPHLP 108 (176)
T ss_dssp CCBCTTHHHHHHHHH---HTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---E------EEEEEECCCG
T ss_pred CcCCccHHHHHHHHH---HCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---e------eEEEEcCCCC
Confidence 356799999777776 456999999999 688888888886532 4 455 35
Q ss_pred -ccCC----CccchhhhccCCCCCCcEEEEEcCCc
Q 002166 320 -VKSG----SRKSLFNVFQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 320 -r~sg----~~KsL~~lfp~g~~~~~mvVIIDDR~ 349 (957)
-+.+ +..-+..++......++-+++|+|+.
T Consensus 109 ~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~ 143 (176)
T 2fpr_A 109 ADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRA 143 (176)
T ss_dssp GGCCSSSTTSCGGGGGGC----CCGGGCEEEESSH
T ss_pred cccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCH
Confidence 2222 22223444332225667788999885
No 147
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=91.94 E-value=0.052 Score=60.30 Aligned_cols=77 Identities=13% Similarity=0.151 Sum_probs=49.3
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCc------------HHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cccc
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAE------------RDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRKS 327 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGt------------R~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~Ks 327 (957)
.+-||+.+++..|+ ..-|.|.|.||.. +.++..+++.+.- .| +-|+|.++. ..|-
T Consensus 87 ~~~pgv~e~L~~L~---~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl---~f------d~i~~~~~~~~~KP 154 (416)
T 3zvl_A 87 ILYPEIPKKLQELA---AEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV---PF------QVLVATHAGLNRKP 154 (416)
T ss_dssp ESCTTHHHHHHHHH---HTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS---CC------EEEEECSSSTTSTT
T ss_pred hhcccHHHHHHHHH---HCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC---CE------EEEEECCCCCCCCC
Confidence 35689999888886 5669999999976 3347777776542 24 467776443 2222
Q ss_pred ----hhhhccCC----CCCCcEEEEEcCCc
Q 002166 328 ----LFNVFQDG----TCHPKMALVIDDRL 349 (957)
Q Consensus 328 ----L~~lfp~g----~~~~~mvVIIDDR~ 349 (957)
+..++... ..+++-+++|+|+.
T Consensus 155 ~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~ 184 (416)
T 3zvl_A 155 VSGMWDHLQEQANEGIPISVEDSVFVGDAA 184 (416)
T ss_dssp SSHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred CHHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence 22222211 15678899999986
No 148
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=91.80 E-value=0.41 Score=44.29 Aligned_cols=67 Identities=13% Similarity=0.111 Sum_probs=49.7
Q ss_pred CCchHHHHHHHHhcC------CCeEEEEeeecCCCceEEEEEEECC-----EEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 705 ETPSGVLQDIAMKCG------TKVEFRPALVASTELQFSIEAWFAG-----EKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 705 ~n~KS~LQE~~QK~~------~~~~Y~~v~~~~Hdk~FtveV~I~G-----~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
.+.++.|+.||++.- ..+.|........+..| ++|.+=. ...|.-+ +|||.||+.||=.|++.|-+.
T Consensus 4 ~sAi~lL~~yC~~Lp~d~~~~~~P~~~~~~~~~~~~~~-c~v~LP~~splr~i~g~~~-~sk~~AK~sAAf~Ac~~L~~~ 81 (102)
T 2kou_A 4 GSSISMMYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTI-CRITLPANAPISEIESSLL-PSTEAAKKDACLKAVHELHNL 81 (102)
T ss_dssp SHHHHHHHHHHTTSSSCTTCCSSCEEEEEECCGGGCEE-EEEECCTTCSSCCEEEEEE-SSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCccceEEEeEeecCCCeE-EEEECCCCCCCCeeeCCcc-ccHHHHHHHHHHHHHHHHHHC
Confidence 357899999998853 34688854333334566 7777654 5667777 999999999999999999763
No 149
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=91.78 E-value=0.19 Score=48.46 Aligned_cols=80 Identities=9% Similarity=-0.025 Sum_probs=54.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Ccc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~K----sL~~lfp~ 334 (957)
+++.|++.+++..|+ ..-|.++|+|++.+.++..+++.+ +...+++.+++.+.. ..| -+..++..
T Consensus 98 ~~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (233)
T 3umb_A 98 LSAFPENVPVLRQLR---EMGLPLGILSNGNPQMLEIAVKSA-------GMSGLFDHVLSVDAVRLYKTAPAAYALAPRA 167 (233)
T ss_dssp CEECTTHHHHHHHHH---TTTCCEEEEESSCHHHHHHHHHTT-------TCTTTCSEEEEGGGTTCCTTSHHHHTHHHHH
T ss_pred CCCCCCHHHHHHHHH---hCCCcEEEEeCCCHHHHHHHHHHC-------CcHhhcCEEEEecccCCCCcCHHHHHHHHHH
Confidence 467799999777775 445999999999999999998874 333455688877532 212 23333221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
...+++-+++|+|+.
T Consensus 168 ~~~~~~~~~~vGD~~ 182 (233)
T 3umb_A 168 FGVPAAQILFVSSNG 182 (233)
T ss_dssp HTSCGGGEEEEESCH
T ss_pred hCCCcccEEEEeCCH
Confidence 125677888889985
No 150
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=91.66 E-value=0.52 Score=50.15 Aligned_cols=76 Identities=11% Similarity=0.112 Sum_probs=44.1
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcH----HHHHHHHHhhCCCCCccccccccCeEEeccCCCc--cchhhhccC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAER----DYALEMWRLLDPESNLINTKELLDRIVCVKSGSR--KSLFNVFQD 334 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR----~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~--KsL~~lfp~ 334 (957)
++-||+.+|+.+|. ..-+.++|.|+-.. .....-++.+.=.+ ++. ..++.+.+..- ..+..|...
T Consensus 101 ~~~pg~~ell~~L~---~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~-----~~Lilr~~~~~K~~~r~~L~~~ 171 (260)
T 3pct_A 101 AAIPGAVEFSNYVN---ANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTG-VND-----KTLLLKKDKSNKSVRFKQVEDM 171 (260)
T ss_dssp EECTTHHHHHHHHH---HTTCEEEEEEEEETTTSHHHHHHHHHHHTCCC-CST-----TTEEEESSCSSSHHHHHHHHTT
T ss_pred CCCccHHHHHHHHH---HCCCeEEEEeCCCccccHHHHHHHHHHcCcCc-ccc-----ceeEecCCCCChHHHHHHHHhc
Confidence 34489999777776 66799999998754 46666666542111 011 25665533322 223444431
Q ss_pred CCCCCcEEEEEcCC
Q 002166 335 GTCHPKMALVIDDR 348 (957)
Q Consensus 335 g~~~~~mvVIIDDR 348 (957)
.-+.++.|+|.
T Consensus 172 ---gy~iv~~iGD~ 182 (260)
T 3pct_A 172 ---GYDIVLFVGDN 182 (260)
T ss_dssp ---TCEEEEEEESS
T ss_pred ---CCCEEEEECCC
Confidence 24678888886
No 151
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=91.38 E-value=0.093 Score=51.42 Aligned_cols=67 Identities=10% Similarity=-0.030 Sum_probs=40.6
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEEEEcCC
Q 002166 269 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDR 348 (957)
Q Consensus 269 Lr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~~mvVIIDDR 348 (957)
++..|+ ..-+.+.|.|++.+.++..+++.+.=+. +|. .+ .+....+..+.......++-++.|+|+
T Consensus 54 ~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~lgl~~-~f~------~~----~~K~~~~~~~~~~~g~~~~~~~~vGD~ 119 (189)
T 3mn1_A 54 GIKMLI---ASGVTTAIISGRKTAIVERRAKSLGIEH-LFQ------GR----EDKLVVLDKLLAELQLGYEQVAYLGDD 119 (189)
T ss_dssp HHHHHH---HTTCEEEEECSSCCHHHHHHHHHHTCSE-EEC------SC----SCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred HHHHHH---HCCCEEEEEECcChHHHHHHHHHcCCHH-Hhc------Cc----CChHHHHHHHHHHcCCChhHEEEECCC
Confidence 455776 4568999999999999999999864321 222 22 111122333322111456677888887
Q ss_pred c
Q 002166 349 L 349 (957)
Q Consensus 349 ~ 349 (957)
.
T Consensus 120 ~ 120 (189)
T 3mn1_A 120 L 120 (189)
T ss_dssp G
T ss_pred H
Confidence 5
No 152
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=90.91 E-value=0.16 Score=51.63 Aligned_cols=85 Identities=13% Similarity=0.138 Sum_probs=57.0
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~ 334 (957)
+++.||+.+++..|+ . .|.+.|+|++.+.++..+++.+ +...+|+.|++.++ +..| -+..++..
T Consensus 120 ~~~~~g~~~~L~~L~---~-~~~l~i~Tn~~~~~~~~~l~~~-------gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~ 188 (260)
T 2gfh_A 120 MILADDVKAMLTELR---K-EVRLLLLTNGDRQTQREKIEAC-------ACQSYFDAIVIGGEQKEEKPAPSIFYHCCDL 188 (260)
T ss_dssp CCCCHHHHHHHHHHH---T-TSEEEEEECSCHHHHHHHHHHH-------TCGGGCSEEEEGGGSSSCTTCHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHH---c-CCcEEEEECcChHHHHHHHHhc-------CHHhhhheEEecCCCCCCCCCHHHHHHHHHH
Confidence 456799999777775 2 4999999999999999999885 44455668777643 2222 22222221
Q ss_pred CCCCCcEEEEEcCC--cccCCCC
Q 002166 335 GTCHPKMALVIDDR--LKVWDDK 355 (957)
Q Consensus 335 g~~~~~mvVIIDDR--~dVW~~~ 355 (957)
....++-+++|+|+ .||-...
T Consensus 189 ~~~~~~~~~~vGDs~~~Di~~A~ 211 (260)
T 2gfh_A 189 LGVQPGDCVMVGDTLETDIQGGL 211 (260)
T ss_dssp HTCCGGGEEEEESCTTTHHHHHH
T ss_pred cCCChhhEEEECCCchhhHHHHH
Confidence 12567889999994 5665444
No 153
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=90.37 E-value=0.24 Score=47.79 Aligned_cols=38 Identities=11% Similarity=-0.181 Sum_probs=29.4
Q ss_pred cChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCC
Q 002166 264 PAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE 304 (957)
Q Consensus 264 Pgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~ 304 (957)
|...++++.|+ ++-+.++|+|+..+.++..+++.+.-+
T Consensus 38 ~~~~~~l~~L~---~~G~~~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 38 VRDGLGIKMLM---DADIQVAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHHHHH---HTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred cchHHHHHHHH---HCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence 44456666675 456899999999999999999987543
No 154
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=90.35 E-value=0.58 Score=44.90 Aligned_cols=80 Identities=11% Similarity=0.024 Sum_probs=50.9
Q ss_pred EeeCcChHHHHHHHhhhccc-cEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-C-ccc----hhhhc
Q 002166 260 VRLRPAWEDLRSYLTARGRK-RFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-S-RKS----LFNVF 332 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk-~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~-~Ks----L~~lf 332 (957)
+++.|++.+++.+|+ .. -+.+.|+|++.+.++..+++.+.-.. +|. -+++.++. . .|. +..+.
T Consensus 92 ~~~~~~~~~~l~~l~---~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~------~~~~~~~~~~~~k~~~~~~~~~~ 161 (234)
T 2hcf_A 92 ITLLEGVRELLDALS---SRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFP------FGAFADDALDRNELPHIALERAR 161 (234)
T ss_dssp EEECTTHHHHHHHHH---TCTTEEEEEECSSCHHHHHHHHHTTTCST-TCS------CEECTTTCSSGGGHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHH---hCCCceEEEEcCCcHHHHHHHHHHCCchh-hcC------cceecCCCcCccchHHHHHHHHH
Confidence 467799999777775 34 59999999999999999988864332 343 34444332 1 121 22222
Q ss_pred cCCC--CCCcEEEEEcCCc
Q 002166 333 QDGT--CHPKMALVIDDRL 349 (957)
Q Consensus 333 p~g~--~~~~mvVIIDDR~ 349 (957)
...+ ..++-+++|+|+.
T Consensus 162 ~~lg~~~~~~~~i~iGD~~ 180 (234)
T 2hcf_A 162 RMTGANYSPSQIVIIGDTE 180 (234)
T ss_dssp HHHCCCCCGGGEEEEESSH
T ss_pred HHhCCCCCcccEEEECCCH
Confidence 1111 3567788899885
No 155
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=89.84 E-value=0.15 Score=51.68 Aligned_cols=32 Identities=13% Similarity=-0.049 Sum_probs=26.5
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCC
Q 002166 269 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 303 (957)
Q Consensus 269 Lr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP 303 (957)
++..|+ ..-|.+.|.|...+..|..+++.|.=
T Consensus 84 ~L~~L~---~~G~~l~I~T~~~~~~~~~~l~~lgi 115 (211)
T 3ij5_A 84 GIRCLI---TSDIDVAIITGRRAKLLEDRANTLGI 115 (211)
T ss_dssp HHHHHH---HTTCEEEEECSSCCHHHHHHHHHHTC
T ss_pred HHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 455776 55689999999999999999998653
No 156
>2db2_A KIAA0890 protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.78 E-value=0.8 Score=43.57 Aligned_cols=67 Identities=16% Similarity=0.281 Sum_probs=49.5
Q ss_pred CchHHHHHHHHhc-CC----C-eEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 706 TPSGVLQDIAMKC-GT----K-VEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 706 n~KS~LQE~~QK~-~~----~-~~Y~~v~~~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
-||++|.--.|+- +. . +.|... +-...+.-|+.+.+=...--+|.|+.|-|||.+||..|+++|+.-
T Consensus 18 ~PKnLL~~ViqrA~~ss~~kd~l~~~~t-~g~k~K~~tl~l~WP~~mef~a~G~rK~eAE~kAAA~AC~kLK~L 90 (119)
T 2db2_A 18 QPKNLLNSVIGRALGISHAKDKLVYVHT-NGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGW 90 (119)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHEEEEEC-CSSSSEEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHccCchhhheeEEee-cCCceeEEEEEecCCCcEEEEeeccchHHHHHHHHHHHHHHHHHc
Confidence 4799999988873 31 1 344432 112456777777777766669999999999999999999999874
No 157
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=89.72 E-value=0.084 Score=53.03 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=28.1
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhh
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 301 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlL 301 (957)
..|++.++++.|+ .+-|.+.|.|++.+.++..+++.|
T Consensus 89 ~~~~~~e~l~~L~---~~G~~l~ivTn~~~~~~~~~l~~l 125 (211)
T 2b82_A 89 PKEVARQLIDMHV---RRGDAIFFVTGRSPTKTETVSKTL 125 (211)
T ss_dssp ECHHHHHHHHHHH---HHTCEEEEEECSCCCSSCCHHHHH
T ss_pred CcHHHHHHHHHHH---HCCCEEEEEcCCcHHHHHHHHHHH
Confidence 3578889777776 456899999999887766666554
No 158
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=89.11 E-value=0.081 Score=47.11 Aligned_cols=79 Identities=13% Similarity=0.196 Sum_probs=51.1
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccCCC
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQDGT 336 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~g~ 336 (957)
+.|++.++++.|+ ..-+.+.|+|++.+.++..+++.++ ...+++.|++.+. +..| -+..+.....
T Consensus 19 ~~~~~~~~l~~L~---~~G~~~~i~S~~~~~~~~~~l~~~~-------l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~ 88 (137)
T 2pr7_A 19 DQRRWRNLLAAAK---KNGVGTVILSNDPGGLGAAPIRELE-------TNGVVDKVLLSGELGVEKPEEAAFQAAADAID 88 (137)
T ss_dssp HHHHHHHHHHHHH---HTTCEEEEEECSCCGGGGHHHHHHH-------HTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTT
T ss_pred cCccHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHCC-------hHhhccEEEEeccCCCCCCCHHHHHHHHHHcC
Confidence 4478988666665 4459999999999999988888752 2344567776532 2222 2222322222
Q ss_pred CCCcEEEEEcCCcc
Q 002166 337 CHPKMALVIDDRLK 350 (957)
Q Consensus 337 ~~~~mvVIIDDR~d 350 (957)
..++-+++|+|+..
T Consensus 89 ~~~~~~~~vgD~~~ 102 (137)
T 2pr7_A 89 LPMRDCVLVDDSIL 102 (137)
T ss_dssp CCGGGEEEEESCHH
T ss_pred CCcccEEEEcCCHH
Confidence 56678889999864
No 159
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=89.11 E-value=0.4 Score=47.37 Aligned_cols=79 Identities=18% Similarity=0.075 Sum_probs=53.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQD 334 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp~ 334 (957)
+++.||+.+++..|+ .+-|.+.|+|++.+.++..+++.+.-. +| +.|++.++. +..-+..+...
T Consensus 109 ~~~~~g~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f------~~~~~~~~~~~~Kp~p~~~~~~~~~ 177 (240)
T 2hi0_A 109 TGPFPGILDLMKNLR---QKGVKLAVVSNKPNEAVQVLVEELFPG--SF------DFALGEKSGIRRKPAPDMTSECVKV 177 (240)
T ss_dssp CEECTTHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHHHSTT--TC------SEEEEECTTSCCTTSSHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHH---HCCCEEEEEeCCCHHHHHHHHHHcCCc--ce------eEEEecCCCCCCCCCHHHHHHHHHH
Confidence 467899999777776 456899999999999999999886532 44 467765431 11122222221
Q ss_pred CCCCCcEEEEEcCCc
Q 002166 335 GTCHPKMALVIDDRL 349 (957)
Q Consensus 335 g~~~~~mvVIIDDR~ 349 (957)
.+..++-+|+|+|+.
T Consensus 178 l~~~~~~~~~vGDs~ 192 (240)
T 2hi0_A 178 LGVPRDKCVYIGDSE 192 (240)
T ss_dssp HTCCGGGEEEEESSH
T ss_pred cCCCHHHeEEEcCCH
Confidence 125678899999984
No 160
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=87.69 E-value=0.6 Score=57.36 Aligned_cols=66 Identities=17% Similarity=0.285 Sum_probs=51.2
Q ss_pred CCCCchHHHHHHHHhcCCCeEEEEeee--------cCC-----C-ceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHH
Q 002166 703 STETPSGVLQDIAMKCGTKVEFRPALV--------AST-----E-LQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIK 768 (957)
Q Consensus 703 ~~~n~KS~LQE~~QK~~~~~~Y~~v~~--------~~H-----d-k~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~ 768 (957)
++-|||..++ ||.|.+..|.+.+. |+- - -.|...+.+=+-.+-.|.=+-||+|||.||+.||+
T Consensus 15 ~~~~pk~~~~---q~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~lp~~~~~~~~~~~kkd~eq~aa~~al~ 91 (950)
T 3htx_A 15 HTPTPKAIIH---QKFGAKASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSNVFKKKKDSEQSAAELALD 91 (950)
T ss_dssp CCCCCHHHHH---HTTGGGSEEEEEEECCSCSCCCTTCCSCCCCCCEEEEEEECSSCEEECCCBSCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHH---HHhCcceeeeehhhhcccCCCCCccccCCCCCeeEEEEeeCCCceEecchhhccccHHHHHHHHHHH
Confidence 5668998865 67888889976432 111 2 28888888877665589999999999999999999
Q ss_pred HHH
Q 002166 769 HLA 771 (957)
Q Consensus 769 ~L~ 771 (957)
+|.
T Consensus 92 ~~g 94 (950)
T 3htx_A 92 KLG 94 (950)
T ss_dssp TTT
T ss_pred HhC
Confidence 993
No 161
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=87.32 E-value=0.32 Score=51.50 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=29.7
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhh
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 301 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlL 301 (957)
++|++.+++.+|+ . -+.+.|+|...+.|+..+.+.+
T Consensus 104 ~~~~~~~~l~~l~---~-g~~~~i~t~~~~~~~~~~~~~~ 139 (332)
T 1y8a_A 104 FVPDAEKAMATLQ---E-RWTPVVISTSYTQYLRRTASMI 139 (332)
T ss_dssp BCTTHHHHHHHHH---T-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHH---c-CCcEEEEECCceEEEcccchhh
Confidence 3579999888987 3 6789999999999998887664
No 162
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=86.99 E-value=0.37 Score=53.61 Aligned_cols=52 Identities=15% Similarity=0.061 Sum_probs=41.1
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccC--eEEecc
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLD--RIVCVK 321 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~--RIisr~ 321 (957)
+++.||+.++++.|+ ++-|.+.|.|++.+.++..+++.+ +...+|+ .|+|-+
T Consensus 214 ~~l~pGv~elL~~Lk---~~Gi~laIvTn~~~~~~~~~L~~l-------gL~~~Fd~~~Ivs~d 267 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLK---GAGFELGIATGRPYTETVVPFENL-------GLLPYFEADFIATAS 267 (384)
T ss_dssp SSCHHHHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHH-------TCGGGSCGGGEECHH
T ss_pred CCcCcCHHHHHHHHH---hCCCEEEEEeCCcHHHHHHHHHHc-------CChHhcCCCEEEecc
Confidence 467899999888886 456999999999999999999885 3334555 788853
No 163
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=86.33 E-value=0.91 Score=42.90 Aligned_cols=79 Identities=9% Similarity=0.156 Sum_probs=52.6
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-C----ccchhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-S----RKSLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~----~KsL~~lfp~g 335 (957)
.+.|++.+++.+|+ ..-+.++|+|++.+.++..+++.++ ....++.+++.+.. . ...+..+....
T Consensus 94 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~ 163 (226)
T 1te2_A 94 PLLPGVREAVALCK---EQGLLVGLASASPLHMLEKVLTMFD-------LRDSFDALASAEKLPYSKPHPQVYLDCAAKL 163 (226)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEESSCHHHHHHHHHHTT-------CGGGCSEEEECTTSSCCTTSTHHHHHHHHHH
T ss_pred CcCccHHHHHHHHH---HCCCcEEEEeCCcHHHHHHHHHhcC-------cHhhCcEEEeccccCCCCCChHHHHHHHHHc
Confidence 45689999777775 4458999999999999999988753 33445677775432 1 12333333221
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
...++-++.|+|+.
T Consensus 164 ~i~~~~~i~iGD~~ 177 (226)
T 1te2_A 164 GVDPLTCVALEDSV 177 (226)
T ss_dssp TSCGGGEEEEESSH
T ss_pred CCCHHHeEEEeCCH
Confidence 25667888899986
No 164
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=85.83 E-value=0.42 Score=45.24 Aligned_cols=79 Identities=23% Similarity=0.238 Sum_probs=51.7
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccC-CCcc----chhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSRK----SLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~K----sL~~lfp~g 335 (957)
++.|++.+++.+|+ ... .++|+|++.+.++..+++.++ ...+++.+++.+. +..| -+..++...
T Consensus 86 ~~~~~~~~~l~~l~---~~g-~~~i~s~~~~~~~~~~l~~~~-------~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 154 (200)
T 3cnh_A 86 QPRPEVLALARDLG---QRY-RMYSLNNEGRDLNEYRIRTFG-------LGEFLLAFFTSSALGVMKPNPAMYRLGLTLA 154 (200)
T ss_dssp CBCHHHHHHHHHHT---TTS-EEEEEECCCHHHHHHHHHHHT-------GGGTCSCEEEHHHHSCCTTCHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHH---HcC-CEEEEeCCcHHHHHHHHHhCC-------HHHhcceEEeecccCCCCCCHHHHHHHHHHc
Confidence 36799999777775 344 999999999999999988753 3345567777532 2111 222222211
Q ss_pred CCCCcEEEEEcCCcc
Q 002166 336 TCHPKMALVIDDRLK 350 (957)
Q Consensus 336 ~~~~~mvVIIDDR~d 350 (957)
...++-+++|+|+..
T Consensus 155 ~~~~~~~~~vgD~~~ 169 (200)
T 3cnh_A 155 QVRPEEAVMVDDRLQ 169 (200)
T ss_dssp TCCGGGEEEEESCHH
T ss_pred CCCHHHeEEeCCCHH
Confidence 256678889999863
No 165
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=85.56 E-value=0.79 Score=43.77 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=53.9
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCc---HHHHHHHHHhhCCCCCccccccccCeEEeccC-CCc----cchhhhcc
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAE---RDYALEMWRLLDPESNLINTKELLDRIVCVKS-GSR----KSLFNVFQ 333 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGt---R~YA~~I~rlLDP~g~lFg~~~l~~RIisr~s-g~~----KsL~~lfp 333 (957)
+.|++.+++.+|+ ..-+.+.|+|++. +.++..+++.+ +...+++.+++.++ +.. .-+..+..
T Consensus 100 ~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~~~~l~~~-------~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~ 169 (235)
T 2om6_A 100 VLEGTKEALQFVK---ERGLKTAVIGNVMFWPGSYTRLLLERF-------GLMEFIDKTFFADEVLSYKPRKEMFEKVLN 169 (235)
T ss_dssp BCTTHHHHHHHHH---HTTCEEEEEECCCSSCHHHHHHHHHHT-------TCGGGCSEEEEHHHHTCCTTCHHHHHHHHH
T ss_pred cCccHHHHHHHHH---HCCCEEEEEcCCcccchhHHHHHHHhC-------CcHHHhhhheeccccCCCCCCHHHHHHHHH
Confidence 4689999777776 3458999999999 99999888875 33445567777532 211 22222222
Q ss_pred CCCCCCcEEEEEcCCc--cc
Q 002166 334 DGTCHPKMALVIDDRL--KV 351 (957)
Q Consensus 334 ~g~~~~~mvVIIDDR~--dV 351 (957)
..+..++-++.|+|+. |+
T Consensus 170 ~lgi~~~~~~~iGD~~~nDi 189 (235)
T 2om6_A 170 SFEVKPEESLHIGDTYAEDY 189 (235)
T ss_dssp HTTCCGGGEEEEESCTTTTH
T ss_pred HcCCCccceEEECCChHHHH
Confidence 2226678899999986 45
No 166
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=84.37 E-value=1.5 Score=41.43 Aligned_cols=79 Identities=16% Similarity=0.118 Sum_probs=52.3
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~----KsL~~lfp~g 335 (957)
.+.|++.+++.+|+ ..-+.+.|+|++.+.++..+++.++ ....++.+++.+.. .. ..+..+....
T Consensus 89 ~~~~~~~~~l~~l~---~~g~~~~i~s~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 158 (225)
T 3d6j_A 89 ILFPDTLPTLTHLK---KQGIRIGIISTKYRFRILSFLRNHM-------PDDWFDIIIGGEDVTHHKPDPEGLLLAIDRL 158 (225)
T ss_dssp EECTTHHHHHHHHH---HHTCEEEEECSSCHHHHHHHHHTSS-------CTTCCSEEECGGGCSSCTTSTHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHH---HCCCeEEEEECCCHHHHHHHHHHcC-------chhheeeeeehhhcCCCCCChHHHHHHHHHh
Confidence 45689999777776 4458899999999999999988753 22334567765432 11 2233333322
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
...++-++.|+|+.
T Consensus 159 ~~~~~~~i~iGD~~ 172 (225)
T 3d6j_A 159 KACPEEVLYIGDST 172 (225)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCChHHeEEEcCCH
Confidence 25677888999985
No 167
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=83.25 E-value=1.1 Score=42.29 Aligned_cols=77 Identities=16% Similarity=0.161 Sum_probs=47.5
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcH---------------HHHHHHHHhhCCCCCccccccccCeEE-ec----
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAER---------------DYALEMWRLLDPESNLINTKELLDRIV-CV---- 320 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR---------------~YA~~I~rlLDP~g~lFg~~~l~~RIi-sr---- 320 (957)
++.|++.++++.|+ .+-|.+.|+|++.+ .++..+++.+. .+|. .++ |.
T Consensus 27 ~~~~g~~~~l~~L~---~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~------~~~~~~~~~~ 94 (179)
T 3l8h_A 27 IALPGSLQAIARLT---QADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG---GVVD------AIFMCPHGPD 94 (179)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT---CCCC------EEEEECCCTT
T ss_pred eECcCHHHHHHHHH---HCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC---Ccee------EEEEcCCCCC
Confidence 45689999777776 45699999999997 56666666654 4444 333 32
Q ss_pred cC-CCcc----chhhhccCCCCCCcEEEEEcCCc
Q 002166 321 KS-GSRK----SLFNVFQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 321 ~s-g~~K----sL~~lfp~g~~~~~mvVIIDDR~ 349 (957)
++ +..| -+..++......++-+++|+|+.
T Consensus 95 ~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~ 128 (179)
T 3l8h_A 95 DGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSL 128 (179)
T ss_dssp SCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 11 1122 12223221125677889999975
No 168
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=81.79 E-value=2.3 Score=46.27 Aligned_cols=38 Identities=21% Similarity=0.186 Sum_probs=35.0
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhh
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 301 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlL 301 (957)
++.|...+|...|+ ..-|++||+|.+.+.+...++..+
T Consensus 143 ~~~~~~~~l~~~l~---~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLM---ENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHH---HCCCEEEEEeCCcHHHHHHHHhhc
Confidence 78899999999998 788999999999999999999875
No 169
>2db2_A KIAA0890 protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.63 E-value=1.6 Score=41.53 Aligned_cols=37 Identities=24% Similarity=0.188 Sum_probs=29.7
Q ss_pred EEEEEE---CCEEEeecccCCHHHHHHHHHHHHHHHHhhcc
Q 002166 873 YAQVEI---DGQVLGKGIGSTWDEAKMQAAEKALGSLRSMF 910 (957)
Q Consensus 873 ~~qV~I---gGkvyG~G~G~SKKeAKqqAAk~AL~sL~s~~ 910 (957)
.|++++ .--+| +|.|+.|.||+.+||-+|+..|++.-
T Consensus 52 ~~tl~l~WP~~mef-~a~G~rK~eAE~kAAA~AC~kLK~Lg 91 (119)
T 2db2_A 52 KVTLHIKWPKSVEV-EGYGSKKIDAERQAAAAACQLFKGWG 91 (119)
T ss_dssp EEEEEECSSSCEEE-EEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCcEEE-EeeccchHHHHHHHHHHHHHHHHHcC
Confidence 455555 23456 89999999999999999999999754
No 170
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=77.02 E-value=2.1 Score=42.24 Aligned_cols=39 Identities=15% Similarity=0.025 Sum_probs=31.4
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCc---------------HHHHHHHHHhhC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAE---------------RDYALEMWRLLD 302 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGt---------------R~YA~~I~rlLD 302 (957)
++.|++.++++.|+ .+-|.+.|+|++. +.++..+++.++
T Consensus 50 ~~~pg~~e~L~~L~---~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 103 (211)
T 2gmw_A 50 EFIDGVIDAMRELK---KMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRD 103 (211)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCcCHHHHHHHHH---HCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcC
Confidence 34589999777776 4569999999999 588888888764
No 171
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=75.38 E-value=1.8 Score=41.22 Aligned_cols=69 Identities=16% Similarity=0.309 Sum_probs=40.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCc---HHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAE---RDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGT 336 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGt---R~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~ 336 (957)
+++.||+.+++..|+ +. |.+.|.|++. +.... ....|+. +|+....++.|+|.++. .+
T Consensus 68 ~~~~pg~~e~L~~L~---~~-~~~~i~T~~~~~~~~~~~-~~~~l~~---~f~~~~~~~~i~~~~~~-------~l---- 128 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLN---EH-YDIYIATAAMDVPTSFHD-KYEWLLE---YFPFLDPQHFVFCGRKN-------II---- 128 (180)
T ss_dssp CCBCTTHHHHHHHHT---TT-SEEEEEECC--CCSHHHH-HHHHHHH---HCTTSCGGGEEECSCGG-------GB----
T ss_pred CCCCcCHHHHHHHHH---hc-CCEEEEeCCCCcchHHHH-HHHHHHH---HcCCCCcccEEEeCCcC-------ee----
Confidence 467899999877775 34 9999999983 22321 1112211 13322334677776431 12
Q ss_pred CCCcEEEEEcCCcc
Q 002166 337 CHPKMALVIDDRLK 350 (957)
Q Consensus 337 ~~~~mvVIIDDR~d 350 (957)
..+++|||+..
T Consensus 129 ---~~~l~ieDs~~ 139 (180)
T 3bwv_A 129 ---LADYLIDDNPK 139 (180)
T ss_dssp ---CCSEEEESCHH
T ss_pred ---cccEEecCCcc
Confidence 23688999876
No 172
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=73.97 E-value=1.6 Score=43.69 Aligned_cols=12 Identities=33% Similarity=0.612 Sum_probs=10.9
Q ss_pred eEEEeCccchhh
Q 002166 144 GIVFDLDETLIV 155 (957)
Q Consensus 144 ~lV~DLDeTLi~ 155 (957)
.|+|||||||+.
T Consensus 14 li~~DlDGTLl~ 25 (268)
T 3r4c_A 14 VLLLDVDGTLLS 25 (268)
T ss_dssp EEEECSBTTTBC
T ss_pred EEEEeCCCCCcC
Confidence 489999999996
No 173
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=72.98 E-value=3.2 Score=42.84 Aligned_cols=73 Identities=12% Similarity=0.092 Sum_probs=49.4
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHP 339 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~ 339 (957)
.+++||+.+++.+|+ ..-+.+.|+|++.+.++..+++.+.= ..+|..|+. .+..+.++.+- ..
T Consensus 162 ~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~l~~~gl-------~~~f~~i~~--~~K~~~~~~l~----~~- 224 (287)
T 3a1c_A 162 DTLKESAKPAVQELK---RMGIKVGMITGDNWRSAEAISRELNL-------DLVIAEVLP--HQKSEEVKKLQ----AK- 224 (287)
T ss_dssp CCBCTTHHHHHHHHH---HTTCEEEEECSSCHHHHHHHHHHHTC-------SEEECSCCT--TCHHHHHHHHT----TT-
T ss_pred cccchhHHHHHHHHH---HCCCeEEEEeCCCHHHHHHHHHHhCC-------ceeeeecCh--HHHHHHHHHHh----cC-
Confidence 478999999888886 45689999999999999999998642 222333331 12223344443 23
Q ss_pred cEEEEEcCCc
Q 002166 340 KMALVIDDRL 349 (957)
Q Consensus 340 ~mvVIIDDR~ 349 (957)
+-+++|.|+.
T Consensus 225 ~~~~~vGDs~ 234 (287)
T 3a1c_A 225 EVVAFVGDGI 234 (287)
T ss_dssp CCEEEEECTT
T ss_pred CeEEEEECCH
Confidence 6678888864
No 174
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=72.97 E-value=1.4 Score=42.32 Aligned_cols=24 Identities=25% Similarity=0.389 Sum_probs=16.0
Q ss_pred eEEEeCccchhhhccccchHHHHHHH
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEAL 169 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l 169 (957)
+|+|||||||+... ..+....+.+
T Consensus 5 ~i~fDlDGTLl~~~--~~~~~~~~~~ 28 (250)
T 2c4n_A 5 NVICDIDGVLMHDN--VAVPGAAEFL 28 (250)
T ss_dssp EEEEECBTTTEETT--EECTTHHHHH
T ss_pred EEEEcCcceEEeCC--EeCcCHHHHH
Confidence 68999999999654 3344443333
No 175
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=72.06 E-value=1.1 Score=45.40 Aligned_cols=28 Identities=32% Similarity=0.300 Sum_probs=18.1
Q ss_pred eeEEEeCccchhhhccccchHHHHHHHHhh
Q 002166 143 LGIVFDLDETLIVANTMRSFEDRIEALLRK 172 (957)
Q Consensus 143 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~~ 172 (957)
|.|+|||||||+... .-.+.-+++|++.
T Consensus 1 ~li~~DlDGTLl~~~--~i~~~~~~al~~l 28 (259)
T 3zx4_A 1 MIVFTDLDGTLLDER--GELGPAREALERL 28 (259)
T ss_dssp CEEEECCCCCCSCSS--SSCSTTHHHHHHH
T ss_pred CEEEEeCCCCCcCCC--cCCHHHHHHHHHH
Confidence 468999999999665 2223444455444
No 176
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=71.89 E-value=1.9 Score=43.24 Aligned_cols=29 Identities=24% Similarity=0.298 Sum_probs=21.5
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhhc
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKIS 174 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~~ 174 (957)
.|+|||||||+...+. ++..+++|++...
T Consensus 8 li~~DlDGTLl~~~~~--~~~~~~ai~~l~~ 36 (266)
T 3pdw_A 8 GYLIDLDGTMYNGTEK--IEEACEFVRTLKD 36 (266)
T ss_dssp EEEEECSSSTTCHHHH--HHHHHHHHHHHHH
T ss_pred EEEEeCcCceEeCCEe--CccHHHHHHHHHH
Confidence 5899999999976443 5667777776543
No 177
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=71.77 E-value=1.8 Score=43.64 Aligned_cols=28 Identities=21% Similarity=0.245 Sum_probs=21.3
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+... +.++..+++|++..
T Consensus 7 li~~DlDGTLl~~~--~~i~~~~eal~~l~ 34 (264)
T 3epr_A 7 GYLIDLDGTIYKGK--SRIPAGERFIERLQ 34 (264)
T ss_dssp EEEECCBTTTEETT--EECHHHHHHHHHHH
T ss_pred EEEEeCCCceEeCC--EECcCHHHHHHHHH
Confidence 68999999999654 55677777776654
No 178
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=71.52 E-value=2.4 Score=42.53 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=21.6
Q ss_pred eeeEEEeCccchhhhccccch-HHHHHHHHhhhc
Q 002166 142 CLGIVFDLDETLIVANTMRSF-EDRIEALLRKIS 174 (957)
Q Consensus 142 ~L~lV~DLDeTLi~A~t~~~~-e~ri~~l~~~~~ 174 (957)
+-.|+|||||||+... +.+ +..+++|++...
T Consensus 6 ~kli~~DlDGTLl~~~--~~i~~~~~~al~~l~~ 37 (246)
T 2amy_A 6 PALCLFDVDGTLTAPR--QKITKEMDDFLQKLRQ 37 (246)
T ss_dssp SEEEEEESBTTTBCTT--SCCCHHHHHHHHHHTT
T ss_pred ceEEEEECCCCcCCCC--cccCHHHHHHHHHHHh
Confidence 3468999999999653 233 566777776643
No 179
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=71.39 E-value=2.2 Score=42.51 Aligned_cols=28 Identities=36% Similarity=0.506 Sum_probs=19.0
Q ss_pred eEEEeCccchhhhccccch-HHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSF-EDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~~~ 173 (957)
.|+|||||||+... +.+ +..+++|+++.
T Consensus 5 li~~DlDGTLl~~~--~~i~~~~~~al~~l~ 33 (231)
T 1wr8_A 5 AISIDIDGTITYPN--RMIHEKALEAIRRAE 33 (231)
T ss_dssp EEEEESTTTTBCTT--SCBCHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCC--CcCCHHHHHHHHHHH
Confidence 48999999999653 334 44556666554
No 180
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=71.37 E-value=2.2 Score=43.63 Aligned_cols=16 Identities=25% Similarity=0.250 Sum_probs=13.0
Q ss_pred eeeEEEeCccchhhhc
Q 002166 142 CLGIVFDLDETLIVAN 157 (957)
Q Consensus 142 ~L~lV~DLDeTLi~A~ 157 (957)
.-.|+|||||||+...
T Consensus 22 ~kliifDlDGTLlds~ 37 (289)
T 3gyg_A 22 QYIVFCDFDETYFPHT 37 (289)
T ss_dssp SEEEEEETBTTTBCSS
T ss_pred CeEEEEECCCCCcCCC
Confidence 3569999999999743
No 181
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=71.00 E-value=2.2 Score=39.44 Aligned_cols=14 Identities=50% Similarity=0.669 Sum_probs=11.8
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
.|+|||||||+...
T Consensus 3 ~i~~DlDGTL~~~~ 16 (126)
T 1xpj_A 3 KLIVDLDGTLTQAN 16 (126)
T ss_dssp EEEECSTTTTBCCC
T ss_pred EEEEecCCCCCCCC
Confidence 58899999999654
No 182
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=69.79 E-value=2.1 Score=40.50 Aligned_cols=77 Identities=9% Similarity=0.117 Sum_probs=48.2
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-Cc----cchhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-SR----KSLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-~~----KsL~~lfp~g 335 (957)
++.|++.+++..|+ ..-+.+.|+|++ ..+..+++.++ ...+++.+++.+.. .. ..+..+....
T Consensus 91 ~~~~~~~~~l~~l~---~~g~~~~i~t~~--~~~~~~l~~~~-------l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~l 158 (221)
T 2wf7_A 91 DVYPGILQLLKDLR---SNKIKIALASAS--KNGPFLLERMN-------LTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp GBCTTHHHHHHHHH---HTTCEEEECCCC--TTHHHHHHHTT-------CGGGCSEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHH---HCCCeEEEEcCc--HHHHHHHHHcC-------hHHHcceEeccccCCCCCCChHHHHHHHHHc
Confidence 45689999777775 355899999998 55666666643 23345567665332 11 1334333322
Q ss_pred CCCCcEEEEEcCCc
Q 002166 336 TCHPKMALVIDDRL 349 (957)
Q Consensus 336 ~~~~~mvVIIDDR~ 349 (957)
+..++-++.|+|+.
T Consensus 159 gi~~~~~i~iGD~~ 172 (221)
T 2wf7_A 159 GVAPSESIGLEDSQ 172 (221)
T ss_dssp TCCGGGEEEEESSH
T ss_pred CCChhHeEEEeCCH
Confidence 25677888999985
No 183
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=69.71 E-value=2.3 Score=43.55 Aligned_cols=32 Identities=22% Similarity=0.207 Sum_probs=20.4
Q ss_pred eeEEEeCccchhhhccccchHHHHHHHHhhhc
Q 002166 143 LGIVFDLDETLIVANTMRSFEDRIEALLRKIS 174 (957)
Q Consensus 143 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~~ 174 (957)
=.|+|||||||+....-.--+..+++|+++..
T Consensus 22 kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~ 53 (283)
T 3dao_A 22 KLIATDIDGTLVKDGSLLIDPEYMSVIDRLID 53 (283)
T ss_dssp CEEEECCBTTTBSTTCSCCCHHHHHHHHHHHH
T ss_pred eEEEEeCcCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 35999999999955321112555666766543
No 184
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=69.14 E-value=1.8 Score=43.81 Aligned_cols=27 Identities=22% Similarity=0.188 Sum_probs=18.3
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+ .. ..++..+++|+++.
T Consensus 4 li~~DlDGTLl-~~--~~~~~~~~~l~~l~ 30 (249)
T 2zos_A 4 LIFLDIDKTLI-PG--YEPDPAKPIIEELK 30 (249)
T ss_dssp EEEECCSTTTC-TT--SCSGGGHHHHHHHH
T ss_pred EEEEeCCCCcc-CC--CCcHHHHHHHHHHH
Confidence 58999999999 32 33444666666554
No 185
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=68.92 E-value=2.4 Score=42.51 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=21.1
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+.... .+...+++|++..
T Consensus 10 li~~DlDGTLl~~~~--~~~~~~~ai~~l~ 37 (268)
T 3qgm_A 10 GYIIDIDGVIGKSVT--PIPEGVEGVKKLK 37 (268)
T ss_dssp EEEEECBTTTEETTE--ECHHHHHHHHHHH
T ss_pred EEEEcCcCcEECCCE--eCcCHHHHHHHHH
Confidence 589999999997654 3566778776654
No 186
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=68.60 E-value=2.3 Score=41.65 Aligned_cols=14 Identities=50% Similarity=0.764 Sum_probs=11.9
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
+|+|||||||+...
T Consensus 4 ~iiFDlDGTL~d~~ 17 (241)
T 2hoq_A 4 VIFFDLDDTLVDTS 17 (241)
T ss_dssp EEEECSBTTTBCHH
T ss_pred EEEEcCCCCCCCCh
Confidence 68999999999554
No 187
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=68.40 E-value=2 Score=43.68 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=18.6
Q ss_pred eEEEeCccchhhhccccchHHH--HHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDR--IEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~r--i~~l~~~~ 173 (957)
.|+|||||||+... +.+-.+ +++|+++.
T Consensus 5 li~~DlDGTLl~~~--~~i~~~~~~~al~~l~ 34 (271)
T 1rlm_A 5 VIVTDMDGTFLNDA--KTYNQPRFMAQYQELK 34 (271)
T ss_dssp EEEECCCCCCSCTT--SCCCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCC--CcCCHHHHHHHHHHHH
Confidence 58999999999653 334333 56666554
No 188
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=68.22 E-value=2.4 Score=40.43 Aligned_cols=14 Identities=36% Similarity=0.404 Sum_probs=11.8
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
+|+|||||||+...
T Consensus 6 ~i~fDlDGTL~d~~ 19 (235)
T 2om6_A 6 LVTFDVWNTLLDLN 19 (235)
T ss_dssp EEEECCBTTTBCHH
T ss_pred EEEEeCCCCCCCcc
Confidence 58999999999643
No 189
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=68.13 E-value=2.6 Score=39.75 Aligned_cols=13 Identities=38% Similarity=0.669 Sum_probs=11.3
Q ss_pred eEEEeCccchhhh
Q 002166 144 GIVFDLDETLIVA 156 (957)
Q Consensus 144 ~lV~DLDeTLi~A 156 (957)
+|+|||||||+..
T Consensus 11 ~i~fDlDGTL~~~ 23 (226)
T 1te2_A 11 AAIFDMDGLLIDS 23 (226)
T ss_dssp EEEECCBTTTBCC
T ss_pred EEEECCCCCcCcC
Confidence 6899999999954
No 190
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=67.69 E-value=2.4 Score=40.63 Aligned_cols=14 Identities=36% Similarity=0.655 Sum_probs=11.9
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
+|+|||||||+...
T Consensus 6 ~iifDlDGTL~d~~ 19 (234)
T 2hcf_A 6 LVLFDIDGTLLKVE 19 (234)
T ss_dssp EEEECCBTTTEEEC
T ss_pred EEEEcCCCCcccCc
Confidence 68999999999654
No 191
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=67.42 E-value=2.7 Score=42.32 Aligned_cols=30 Identities=37% Similarity=0.421 Sum_probs=19.1
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+......--+..+++++++.
T Consensus 4 li~~DlDGTLl~~~~~~i~~~~~~al~~l~ 33 (261)
T 2rbk_A 4 ALFFDIDGTLVSFETHRIPSSTIEALEAAH 33 (261)
T ss_dssp EEEECSBTTTBCTTTSSCCHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCCCCCcCCHHHHHHHHHHH
Confidence 589999999997653211245556565443
No 192
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=67.19 E-value=3.1 Score=42.43 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=20.7
Q ss_pred eeEEEeCccchhhhccccch-HHHHHHHHhhh
Q 002166 143 LGIVFDLDETLIVANTMRSF-EDRIEALLRKI 173 (957)
Q Consensus 143 L~lV~DLDeTLi~A~t~~~~-e~ri~~l~~~~ 173 (957)
-.|++||||||+... +.+ +..+++|+++.
T Consensus 14 kli~~DlDGTLl~~~--~~is~~~~~al~~l~ 43 (262)
T 2fue_A 14 VLCLFDVDGTLTPAR--QKIDPEVAAFLQKLR 43 (262)
T ss_dssp EEEEEESBTTTBSTT--SCCCHHHHHHHHHHT
T ss_pred EEEEEeCccCCCCCC--CcCCHHHHHHHHHHH
Confidence 358999999999654 233 56677777664
No 193
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=67.01 E-value=2.7 Score=39.59 Aligned_cols=13 Identities=38% Similarity=0.447 Sum_probs=11.4
Q ss_pred eEEEeCccchhhh
Q 002166 144 GIVFDLDETLIVA 156 (957)
Q Consensus 144 ~lV~DLDeTLi~A 156 (957)
+|+|||||||+..
T Consensus 8 ~v~fDlDGTL~d~ 20 (225)
T 3d6j_A 8 VYLFDFDYTLADS 20 (225)
T ss_dssp EEEECCBTTTEEC
T ss_pred EEEEeCCCCCCCC
Confidence 6899999999954
No 194
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=66.86 E-value=2.8 Score=43.16 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=20.1
Q ss_pred eEEEeCccchhhhccccch-HHHHHHHHhhhc
Q 002166 144 GIVFDLDETLIVANTMRSF-EDRIEALLRKIS 174 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~~~~ 174 (957)
.|+|||||||+... +.+ +..+++|+++..
T Consensus 7 li~~DlDGTLl~~~--~~i~~~~~~aL~~l~~ 36 (282)
T 1rkq_A 7 LIAIDMDGTLLLPD--HTISPAVKNAIAAARA 36 (282)
T ss_dssp EEEECCCCCCSCTT--SCCCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCC--CcCCHHHHHHHHHHHH
Confidence 58999999999653 223 455677776653
No 195
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=66.70 E-value=1.8 Score=44.61 Aligned_cols=80 Identities=14% Similarity=0.135 Sum_probs=50.3
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCC--------CCCccccccccCeEEeccCCCcc----
Q 002166 259 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP--------ESNLINTKELLDRIVCVKSGSRK---- 326 (957)
Q Consensus 259 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP--------~g~lFg~~~l~~RIisr~sg~~K---- 326 (957)
.+++.||+.+++..|+ .+-+.+.|+|+..+.++..+.+.|+- .|-+| +-+++.+++..|
T Consensus 186 ~~~~~~g~~e~L~~L~---~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~kp~p~ 256 (301)
T 1ltq_A 186 TDVINPMVVELSKMYA---LMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL------VMQCQREQGDTRKDDV 256 (301)
T ss_dssp GCCBCHHHHHHHHHHH---HTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC------SEEEECCTTCCSCHHH
T ss_pred ccCCChHHHHHHHHHH---HCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc------hheeeccCCCCcHHHH
Confidence 3567899999888886 56689999999998887554444333 33333 467776543211
Q ss_pred ----chhhhccCCCCCCcEEEEEcCCcc
Q 002166 327 ----SLFNVFQDGTCHPKMALVIDDRLK 350 (957)
Q Consensus 327 ----sL~~lfp~g~~~~~mvVIIDDR~d 350 (957)
-+..+.. ...+.+++|+|+..
T Consensus 257 ~~~~~~~~~~~---~~~~~~~~vgD~~~ 281 (301)
T 1ltq_A 257 VKEEIFWKHIA---PHFDVKLAIDDRTQ 281 (301)
T ss_dssp HHHHHHHHHTT---TTCEEEEEEECCHH
T ss_pred HHHHHHHHHhc---cccceEEEeCCcHH
Confidence 2333321 12355678999864
No 196
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=66.25 E-value=2.8 Score=41.85 Aligned_cols=27 Identities=22% Similarity=0.166 Sum_probs=17.3
Q ss_pred eEEEeCccchhhhccccch-HHHHHHHHhh
Q 002166 144 GIVFDLDETLIVANTMRSF-EDRIEALLRK 172 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~~ 172 (957)
.|+|||||||+... +.+ +..+++|+++
T Consensus 7 li~fDlDGTLl~~~--~~i~~~~~~al~~l 34 (274)
T 3fzq_A 7 LLILDIDGTLRDEV--YGIPESAKHAIRLC 34 (274)
T ss_dssp EEEECSBTTTBBTT--TBCCHHHHHHHHHH
T ss_pred EEEEECCCCCCCCC--CcCCHHHHHHHHHH
Confidence 58999999999554 223 3344555544
No 197
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=66.09 E-value=4.8 Score=38.01 Aligned_cols=14 Identities=29% Similarity=0.586 Sum_probs=11.9
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
+|+|||||||+...
T Consensus 4 ~i~fDlDGTL~d~~ 17 (221)
T 2wf7_A 4 AVLFDLDGVITDTA 17 (221)
T ss_dssp EEEECCBTTTBTHH
T ss_pred EEEECCCCcccCCh
Confidence 58999999999654
No 198
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=65.83 E-value=3 Score=42.06 Aligned_cols=29 Identities=34% Similarity=0.296 Sum_probs=18.5
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+.....- -+..+++|+++.
T Consensus 7 li~fDlDGTLl~~~~~i-~~~~~~al~~l~ 35 (279)
T 4dw8_A 7 LIVLDLDGTLTNSKKEI-SSRNRETLIRIQ 35 (279)
T ss_dssp EEEECCCCCCSCTTSCC-CHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCcc-CHHHHHHHHHHH
Confidence 58999999999653221 244455565554
No 199
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=65.73 E-value=3 Score=41.74 Aligned_cols=29 Identities=31% Similarity=0.289 Sum_probs=19.2
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+..... --+..+++++++.
T Consensus 5 li~~DlDGTLl~~~~~-i~~~~~~al~~l~ 33 (258)
T 2pq0_A 5 IVFFDIDGTLLDEQKQ-LPLSTIEAVRRLK 33 (258)
T ss_dssp EEEECTBTTTBCTTSC-CCHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCCCCc-cCHHHHHHHHHHH
Confidence 5899999999965422 1244566666554
No 200
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=65.56 E-value=3.1 Score=43.05 Aligned_cols=28 Identities=21% Similarity=0.243 Sum_probs=18.1
Q ss_pred eEEEeCccchhhhccccchHH--HHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFED--RIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~--ri~~l~~~~ 173 (957)
.|+|||||||+... +.+-. .+++|++..
T Consensus 39 li~fDlDGTLld~~--~~i~~~~~~~al~~l~ 68 (304)
T 3l7y_A 39 VIATDMDGTFLNSK--GSYDHNRFQRILKQLQ 68 (304)
T ss_dssp EEEECCCCCCSCTT--SCCCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCC--CccCHHHHHHHHHHHH
Confidence 58999999999553 33333 245665554
No 201
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=65.41 E-value=2.9 Score=42.16 Aligned_cols=28 Identities=25% Similarity=0.357 Sum_probs=10.5
Q ss_pred eEEEeCccchhhhccccch-HHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSF-EDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~~~ 173 (957)
.|+|||||||+... +.+ +..+++|+++.
T Consensus 7 li~~DlDGTLl~~~--~~i~~~~~~al~~l~ 35 (279)
T 3mpo_A 7 LIAIDIDGTLLNEK--NELAQATIDAVQAAK 35 (279)
T ss_dssp EEEECC-------------CHHHHHHHHHHH
T ss_pred EEEEcCcCCCCCCC--CcCCHHHHHHHHHHH
Confidence 58999999999553 222 33445555543
No 202
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=64.98 E-value=2.2 Score=41.80 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=11.6
Q ss_pred eEEEeCccchhhh
Q 002166 144 GIVFDLDETLIVA 156 (957)
Q Consensus 144 ~lV~DLDeTLi~A 156 (957)
+|+|||||||+..
T Consensus 14 ~i~fDlDGTLl~s 26 (271)
T 2x4d_A 14 GVLLDISGVLYDS 26 (271)
T ss_dssp EEEECCBTTTEEC
T ss_pred EEEEeCCCeEEec
Confidence 5899999999974
No 203
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=64.81 E-value=2.9 Score=42.25 Aligned_cols=27 Identities=30% Similarity=0.300 Sum_probs=18.2
Q ss_pred eeEEEeCccchhhhccccchHHHHHHHHh
Q 002166 143 LGIVFDLDETLIVANTMRSFEDRIEALLR 171 (957)
Q Consensus 143 L~lV~DLDeTLi~A~t~~~~e~ri~~l~~ 171 (957)
..|++||||||+... +.++..+++|++
T Consensus 4 ~li~~DlDGTLl~~~--~~~~~~~~~l~~ 30 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ--QALEHLQEYLGD 30 (244)
T ss_dssp EEEEECTBTTTBSCH--HHHHHHHHHHHT
T ss_pred eEEEEeCCCCCcCCH--HHHHHHHHHHHH
Confidence 379999999999643 345545555544
No 204
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=64.74 E-value=3.1 Score=40.95 Aligned_cols=13 Identities=31% Similarity=0.692 Sum_probs=11.3
Q ss_pred eEEEeCccchhhh
Q 002166 144 GIVFDLDETLIVA 156 (957)
Q Consensus 144 ~lV~DLDeTLi~A 156 (957)
+|+|||||||+..
T Consensus 6 ~viFDlDGTL~ds 18 (240)
T 2hi0_A 6 AAIFDMDGTILDT 18 (240)
T ss_dssp EEEECSBTTTEEC
T ss_pred EEEEecCCCCccC
Confidence 6899999999953
No 205
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=64.71 E-value=3.2 Score=41.51 Aligned_cols=27 Identities=7% Similarity=-0.125 Sum_probs=19.2
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHH
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDY 293 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~Y 293 (957)
+.|++.+++..|+ +.+.+ |+|++.+.+
T Consensus 127 ~~~~~~~~l~~l~----~g~~~-i~tn~~~~~ 153 (264)
T 1yv9_A 127 SYEKVVLATLAIQ----KGALF-IGTNPDKNI 153 (264)
T ss_dssp CHHHHHHHHHHHH----TTCEE-EESCCCSEE
T ss_pred CHHHHHHHHHHHh----CCCEE-EEECCCCcc
Confidence 4578888666664 34666 999998854
No 206
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=64.65 E-value=3.1 Score=42.15 Aligned_cols=29 Identities=14% Similarity=0.162 Sum_probs=18.6
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+..... --+..+++|+++.
T Consensus 8 li~fDlDGTLl~~~~~-i~~~~~~al~~l~ 36 (290)
T 3dnp_A 8 LLALNIDGALLRSNGK-IHQATKDAIEYVK 36 (290)
T ss_dssp EEEECCCCCCSCTTSC-CCHHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCCCc-cCHHHHHHHHHHH
Confidence 5899999999965321 1244555665554
No 207
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=64.28 E-value=6.7 Score=48.45 Aligned_cols=69 Identities=13% Similarity=0.093 Sum_probs=45.8
Q ss_pred ChhHHH-HHHhhhcCCceeeeecCCCC--CCC---CCC-ccEEEEEEE-CCEEEeecccCCHHHHHHHHHHHHHHHHh
Q 002166 838 GSVSAL-KELCMTEGLGVVFQQQPPSS--ANS---VQK-DEVYAQVEI-DGQVLGKGIGSTWDEAKMQAAEKALGSLR 907 (957)
Q Consensus 838 NpVglL-NELcqkeGL~v~f~~~~~~~--sGp---~h~-keF~~qV~I-gGkvyG~G~G~SKKeAKqqAAk~AL~sL~ 907 (957)
-|+..+ |.+-+|.-+.|+.+.+.... .|. ... ..|.|++.+ ++-+. .|+=+-||.|+|.||+.||.+|=
T Consensus 18 ~pk~~~~q~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~lp~~~~~-~~~~~~kkd~eq~aa~~al~~~g 94 (950)
T 3htx_A 18 TPKAIIHQKFGAKASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVV-SNVFKKKKDSEQSAAELALDKLG 94 (950)
T ss_dssp CCHHHHHHTTGGGSEEEEEEECCSCSCCCTTCCSCCCCCCEEEEEEECSSCEEE-CCCBSCHHHHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHhCcceeeeehhhhcccCCCCCccccCCCCCeeEEEEeeCCCceEe-cchhhccccHHHHHHHHHHHHhC
Confidence 577777 55666655555555431100 011 122 368888888 45555 79999999999999999999984
No 208
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=64.15 E-value=2.3 Score=40.45 Aligned_cols=15 Identities=33% Similarity=0.361 Sum_probs=12.5
Q ss_pred eeEEEeCccchhhhc
Q 002166 143 LGIVFDLDETLIVAN 157 (957)
Q Consensus 143 L~lV~DLDeTLi~A~ 157 (957)
-+|+|||||||+.+.
T Consensus 5 ~~viFD~DGtL~Ds~ 19 (180)
T 3bwv_A 5 QRIAIDMDEVLADTL 19 (180)
T ss_dssp CEEEEETBTTTBCHH
T ss_pred cEEEEeCCCcccccH
Confidence 479999999999654
No 209
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=63.78 E-value=4 Score=40.34 Aligned_cols=80 Identities=9% Similarity=-0.013 Sum_probs=49.9
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCC-----CccchhhhccCC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSG-----SRKSLFNVFQDG 335 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg-----~~KsL~~lfp~g 335 (957)
++.|++.+++.+|+ ..-|.+.|+|++.+.++..+++.++-.+ +|. +.+++.+.. ....+..+....
T Consensus 103 ~~~~~~~~~l~~l~---~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~-----~~~~~~~~~~~~kp~~~~~~~~~~~l 173 (267)
T 1swv_A 103 SPINGVKEVIASLR---ERGIKIGSTTGYTREMMDIVAKEAALQG-YKP-----DFLVTPDDVPAGRPYPWMCYKNAMEL 173 (267)
T ss_dssp CBCTTHHHHHHHHH---HTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCC-----SCCBCGGGSSCCTTSSHHHHHHHHHH
T ss_pred ccCccHHHHHHHHH---HcCCeEEEEcCCCHHHHHHHHHHcCCcc-cCh-----HheecCCccCCCCCCHHHHHHHHHHh
Confidence 45699999777776 4568999999999999998888763222 221 345554321 112233332211
Q ss_pred CCCC-cEEEEEcCCc
Q 002166 336 TCHP-KMALVIDDRL 349 (957)
Q Consensus 336 ~~~~-~mvVIIDDR~ 349 (957)
+..+ +-++.|+|+.
T Consensus 174 gi~~~~~~i~iGD~~ 188 (267)
T 1swv_A 174 GVYPMNHMIKVGDTV 188 (267)
T ss_dssp TCCSGGGEEEEESSH
T ss_pred CCCCCcCEEEEeCCH
Confidence 2556 7788899885
No 210
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=63.66 E-value=4.7 Score=39.64 Aligned_cols=39 Identities=26% Similarity=0.178 Sum_probs=30.3
Q ss_pred eeCcChHHHHHHHhhhccccEEEEEEeCCcH---------------HHHHHHHHhhC
Q 002166 261 RLRPAWEDLRSYLTARGRKRFEVYVCTMAER---------------DYALEMWRLLD 302 (957)
Q Consensus 261 KLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR---------------~YA~~I~rlLD 302 (957)
++.|++.+++..|+ .+-|.+.|+|++.+ .++..+++.+.
T Consensus 56 ~~~~g~~e~L~~L~---~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 109 (218)
T 2o2x_A 56 VLRPQMLPAIATAN---RAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEG 109 (218)
T ss_dssp CBCGGGHHHHHHHH---HHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTT
T ss_pred eECcCHHHHHHHHH---HCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcC
Confidence 34589999777775 45699999999998 67777777653
No 211
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=62.76 E-value=2.8 Score=41.27 Aligned_cols=31 Identities=10% Similarity=-0.006 Sum_probs=19.7
Q ss_pred eCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHH
Q 002166 262 LRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEM 297 (957)
Q Consensus 262 LRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I 297 (957)
+-|++.+++..|+ +.+.+ |+|+..+.++...
T Consensus 123 ~~~~~~~~l~~l~----~~~~~-i~t~~~~~~~~~~ 153 (259)
T 2ho4_A 123 HYQLLNQAFRLLL----DGAPL-IAIHKARYYKRKD 153 (259)
T ss_dssp BHHHHHHHHHHHH----TTCCE-EESCCCSEEEETT
T ss_pred CHHHHHHHHHHHH----CCCEE-EEECCCCcCcccC
Confidence 3467777555553 44567 9999887665433
No 212
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=62.59 E-value=3.9 Score=41.58 Aligned_cols=26 Identities=35% Similarity=0.443 Sum_probs=18.3
Q ss_pred eEEEeCccchhhhccccch-HHHHHHHHh
Q 002166 144 GIVFDLDETLIVANTMRSF-EDRIEALLR 171 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~ 171 (957)
.|+|||||||+... +.+ +..+++|++
T Consensus 4 li~~DlDGTLl~~~--~~i~~~~~~al~~ 30 (268)
T 1nf2_A 4 VFVFDLDGTLLNDN--LEISEKDRRNIEK 30 (268)
T ss_dssp EEEEECCCCCSCTT--SCCCHHHHHHHHH
T ss_pred EEEEeCCCcCCCCC--CccCHHHHHHHHH
Confidence 48999999999643 223 445677776
No 213
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=61.94 E-value=4.1 Score=40.27 Aligned_cols=15 Identities=13% Similarity=0.240 Sum_probs=12.6
Q ss_pred eEEEeCccchhhhcc
Q 002166 144 GIVFDLDETLIVANT 158 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t 158 (957)
+|+|||||||+....
T Consensus 8 ~i~fDlDGTLld~~~ 22 (267)
T 1swv_A 8 AVIFAWAGTTVDYGC 22 (267)
T ss_dssp EEEECSBTTTBSTTC
T ss_pred EEEEecCCCEEeCCC
Confidence 689999999997543
No 214
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=66.03 E-value=1.6 Score=44.82 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=49.3
Q ss_pred EEeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCC
Q 002166 259 LVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCH 338 (957)
Q Consensus 259 ~vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~ 338 (957)
..+++|++.+++..|+ ..-|.++|.|++.+..+..+++.+.= ..+|..++. ....+-++.+- ..
T Consensus 134 ~~~~~~g~~~~l~~L~---~~g~~~~i~T~~~~~~~~~~~~~~gl-------~~~f~~~~p--~~k~~~~~~l~----~~ 197 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLK---NEGLKIIILSGDKEDKVKELSKELNI-------QEYYSNLSP--EDKVRIIEKLK----QN 197 (263)
Confidence 4579999999777775 45589999999999999999988542 223334431 11222233322 34
Q ss_pred CcEEEEEcCCc
Q 002166 339 PKMALVIDDRL 349 (957)
Q Consensus 339 ~~mvVIIDDR~ 349 (957)
++-+++|+|+.
T Consensus 198 ~~~~~~VGD~~ 208 (263)
T 2yj3_A 198 GNKVLMIGDGV 208 (263)
Confidence 45788888873
No 215
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=61.48 E-value=8.5 Score=36.58 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=48.7
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCcccccccc-CeEEeccC-CCc------cchhhh
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELL-DRIVCVKS-GSR------KSLFNV 331 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~-~RIisr~s-g~~------KsL~~l 331 (957)
+++.|++.+++..| .. .++|+|++.+.++..+++.++- ..++ +.+++.+. +.. ..+..+
T Consensus 86 ~~~~~~~~~~l~~l----~~--~~~i~s~~~~~~~~~~l~~~~l-------~~~~~~~~~~~~~~~~~~~kpk~~~~~~~ 152 (229)
T 2fdr_A 86 VKIIDGVKFALSRL----TT--PRCICSNSSSHRLDMMLTKVGL-------KPYFAPHIYSAKDLGADRVKPKPDIFLHG 152 (229)
T ss_dssp CCBCTTHHHHHHHC----CS--CEEEEESSCHHHHHHHHHHTTC-------GGGTTTCEEEHHHHCTTCCTTSSHHHHHH
T ss_pred CccCcCHHHHHHHh----CC--CEEEEECCChhHHHHHHHhCCh-------HHhccceEEeccccccCCCCcCHHHHHHH
Confidence 35578888844443 32 8999999999999999888632 2334 67777532 111 123333
Q ss_pred ccCCCCCCcEEEEEcCCc
Q 002166 332 FQDGTCHPKMALVIDDRL 349 (957)
Q Consensus 332 fp~g~~~~~mvVIIDDR~ 349 (957)
...-...++-++.|+|+.
T Consensus 153 ~~~l~~~~~~~i~iGD~~ 170 (229)
T 2fdr_A 153 AAQFGVSPDRVVVVEDSV 170 (229)
T ss_dssp HHHHTCCGGGEEEEESSH
T ss_pred HHHcCCChhHeEEEcCCH
Confidence 322125677889999986
No 216
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=61.26 E-value=4.4 Score=41.44 Aligned_cols=28 Identities=25% Similarity=0.186 Sum_probs=18.3
Q ss_pred eEEEeCccchhhhccccch-HHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSF-EDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~~~ 173 (957)
.|+|||||||+... +.+ +..+++|+++.
T Consensus 23 li~~DlDGTLl~~~--~~i~~~~~~al~~l~ 51 (285)
T 3pgv_A 23 VVASDLDGTLLSPD--HFLTPYAKETLKLLT 51 (285)
T ss_dssp EEEEECCCCCSCTT--SCCCHHHHHHHHHHH
T ss_pred EEEEeCcCCCCCCC--CcCCHHHHHHHHHHH
Confidence 58999999999643 222 34455566554
No 217
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=61.12 E-value=2.6 Score=39.80 Aligned_cols=14 Identities=14% Similarity=0.494 Sum_probs=12.1
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
+|+|||||||+...
T Consensus 6 ~viFDlDGTL~d~~ 19 (200)
T 3cnh_A 6 ALFWDIGGVLLTNG 19 (200)
T ss_dssp EEEECCBTTTBCCS
T ss_pred EEEEeCCCeeECCC
Confidence 68999999999754
No 218
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=60.58 E-value=2.9 Score=41.84 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=19.5
Q ss_pred eeeEEEeCccchhhhccccchHHHHHHHHh
Q 002166 142 CLGIVFDLDETLIVANTMRSFEDRIEALLR 171 (957)
Q Consensus 142 ~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~ 171 (957)
.-+++|||||||+..... .+..++++++
T Consensus 17 ~~~v~~DlDGTLl~~~~~--~~~~~~~l~~ 44 (271)
T 1vjr_A 17 IELFILDMDGTFYLDDSL--LPGSLEFLET 44 (271)
T ss_dssp CCEEEECCBTTTEETTEE--CTTHHHHHHH
T ss_pred CCEEEEcCcCcEEeCCEE--CcCHHHHHHH
Confidence 346999999999976443 4555566653
No 219
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=60.36 E-value=2.7 Score=40.08 Aligned_cols=14 Identities=36% Similarity=0.548 Sum_probs=11.7
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
+|+|||||||+...
T Consensus 6 ~i~fDlDGTL~d~~ 19 (229)
T 2fdr_A 6 LIIFDCDGVLVDSE 19 (229)
T ss_dssp EEEECSBTTTBCCH
T ss_pred EEEEcCCCCcCccH
Confidence 58999999999543
No 220
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=56.52 E-value=4.5 Score=39.27 Aligned_cols=30 Identities=20% Similarity=0.216 Sum_probs=19.2
Q ss_pred eEEEeCccchhhhcc--c-cchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANT--M-RSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t--~-~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+.... + ...+.-+++|+.+.
T Consensus 5 ~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~ 37 (142)
T 2obb_A 5 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQ 37 (142)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHH
T ss_pred EEEEECcCCCCCCCCccccccCHHHHHHHHHHH
Confidence 689999999997432 1 12344566666554
No 221
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=56.25 E-value=5.7 Score=40.77 Aligned_cols=28 Identities=29% Similarity=0.239 Sum_probs=17.8
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRK 172 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~ 172 (957)
.|+|||||||+.....- -+..++++++.
T Consensus 6 li~~DlDGTLl~~~~~i-~~~~~~al~~l 33 (288)
T 1nrw_A 6 LIAIDLDGTLLNSKHQV-SLENENALRQA 33 (288)
T ss_dssp EEEEECCCCCSCTTSCC-CHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCcc-CHHHHHHHHHH
Confidence 58999999999654321 23445555444
No 222
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=56.03 E-value=8.1 Score=42.82 Aligned_cols=41 Identities=15% Similarity=0.128 Sum_probs=37.3
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 303 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP 303 (957)
+|++|+..+|...|+ +.-|++||+|-|-+..+..|++.|-.
T Consensus 220 ir~~p~~~eLi~~L~---~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLE---ENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHH---HTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHH---HCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 578999999999998 77899999999999999999998754
No 223
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=55.79 E-value=3.6 Score=41.71 Aligned_cols=15 Identities=47% Similarity=0.682 Sum_probs=12.5
Q ss_pred eeEEEeCccchhhhc
Q 002166 143 LGIVFDLDETLIVAN 157 (957)
Q Consensus 143 L~lV~DLDeTLi~A~ 157 (957)
=+|+|||||||+...
T Consensus 19 k~viFDlDGTLvds~ 33 (260)
T 2gfh_A 19 RAVFFDLDNTLIDTA 33 (260)
T ss_dssp CEEEECCBTTTBCHH
T ss_pred eEEEEcCCCCCCCCH
Confidence 379999999999654
No 224
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=53.96 E-value=3.9 Score=39.21 Aligned_cols=13 Identities=38% Similarity=0.478 Sum_probs=11.4
Q ss_pred eEEEeCccchhhh
Q 002166 144 GIVFDLDETLIVA 156 (957)
Q Consensus 144 ~lV~DLDeTLi~A 156 (957)
+|+||+||||+..
T Consensus 6 ~i~FDlDGTL~d~ 18 (233)
T 3umb_A 6 AVVFDAYGTLFDV 18 (233)
T ss_dssp EEEECSBTTTEET
T ss_pred EEEEeCCCccccc
Confidence 6899999999954
No 225
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=53.37 E-value=7.2 Score=39.84 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=18.6
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+.....= -+..+++|+++.
T Consensus 6 li~~DlDGTLl~~~~~i-~~~~~~~l~~l~ 34 (246)
T 3f9r_A 6 LLLFDVDGTLTPPRLCQ-TDEMRALIKRAR 34 (246)
T ss_dssp EEEECSBTTTBSTTSCC-CHHHHHHHHHHH
T ss_pred EEEEeCcCCcCCCCCcc-CHHHHHHHHHHH
Confidence 58999999999654221 144555565544
No 226
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=52.22 E-value=4.8 Score=41.35 Aligned_cols=32 Identities=25% Similarity=0.216 Sum_probs=20.8
Q ss_pred eeeEEEeCccchhhhccccchHHHHHHHHhhhc
Q 002166 142 CLGIVFDLDETLIVANTMRSFEDRIEALLRKIS 174 (957)
Q Consensus 142 ~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~~ 174 (957)
.-.|++||||||+.... ...+..+++|+++..
T Consensus 9 ~~li~~DlDGTLl~~~~-~~~~~~~~~l~~l~~ 40 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDSHS-YDWQPAAPWLTRLRE 40 (275)
T ss_dssp CEEEEEECTTTTSCSSC-CSCCTTHHHHHHHHH
T ss_pred ceEEEEeCCCCCCCCCC-cCCHHHHHHHHHHHH
Confidence 34699999999997532 123455667666543
No 227
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=51.34 E-value=8.3 Score=37.93 Aligned_cols=22 Identities=27% Similarity=0.215 Sum_probs=13.3
Q ss_pred HHHhhcceeeEEEeCccchhhhc
Q 002166 135 LTMLNLRCLGIVFDLDETLIVAN 157 (957)
Q Consensus 135 ~~ml~~r~L~lV~DLDeTLi~A~ 157 (957)
..|.+..+ +++||+||||+...
T Consensus 19 ~~m~~~~k-~v~~D~DGTL~~~~ 40 (211)
T 2gmw_A 19 SHMAKSVP-AIFLDRDGTINVDH 40 (211)
T ss_dssp -----CBC-EEEECSBTTTBCCC
T ss_pred hhhhhcCC-EEEEcCCCCeECCC
Confidence 34444433 69999999999754
No 228
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=51.10 E-value=12 Score=41.83 Aligned_cols=81 Identities=11% Similarity=0.149 Sum_probs=49.2
Q ss_pred CcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEE
Q 002166 263 RPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMA 342 (957)
Q Consensus 263 RPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~~mv 342 (957)
-||+.++++.|+ ..-+.+.|+|++.+.++..+++.. |+ .+|+..+++.-++..+. ....+..+...-...++-+
T Consensus 258 ypgv~e~L~~Lk---~~Gi~laI~Snn~~~~v~~~l~~~-~~-~~l~l~~~~~v~~~~KP-Kp~~l~~al~~Lgl~pee~ 331 (387)
T 3nvb_A 258 FTEFQEWVKKLK---NRGIIIAVCSKNNEGKAKEPFERN-PE-MVLKLDDIAVFVANWEN-KADNIRTIQRTLNIGFDSM 331 (387)
T ss_dssp HHHHHHHHHHHH---HTTCEEEEEEESCHHHHHHHHHHC-TT-CSSCGGGCSEEEEESSC-HHHHHHHHHHHHTCCGGGE
T ss_pred CHHHHHHHHHHH---HCCCEEEEEcCCCHHHHHHHHhhc-cc-cccCccCccEEEeCCCC-cHHHHHHHHHHhCcCcccE
Confidence 378888777776 566999999999999999999763 11 12333333333333322 1122333322212567788
Q ss_pred EEEcCCc
Q 002166 343 LVIDDRL 349 (957)
Q Consensus 343 VIIDDR~ 349 (957)
++|||+.
T Consensus 332 v~VGDs~ 338 (387)
T 3nvb_A 332 VFLDDNP 338 (387)
T ss_dssp EEECSCH
T ss_pred EEECCCH
Confidence 8888875
No 229
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=50.62 E-value=4.9 Score=37.40 Aligned_cols=67 Identities=13% Similarity=0.016 Sum_probs=40.6
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEEEEcCC
Q 002166 269 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDR 348 (957)
Q Consensus 269 Lr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~~mvVIIDDR 348 (957)
+++.|+ +.-|.+.|.|++.+.++..+++.+.=+. +|. - .++ ....+..+.......++-+++|+|+
T Consensus 39 ~l~~l~---~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~~~------~---~kp-k~~~~~~~~~~~~~~~~~~~~vGD~ 104 (164)
T 3e8m_A 39 GIFWAH---NKGIPVGILTGEKTEIVRRRAEKLKVDY-LFQ------G---VVD-KLSAAEELCNELGINLEQVAYIGDD 104 (164)
T ss_dssp HHHHHH---HTTCCEEEECSSCCHHHHHHHHHTTCSE-EEC------S---CSC-HHHHHHHHHHHHTCCGGGEEEECCS
T ss_pred HHHHHH---HCCCEEEEEeCCChHHHHHHHHHcCCCE-eec------c---cCC-hHHHHHHHHHHcCCCHHHEEEECCC
Confidence 345665 4558999999999999999999854221 222 1 121 1111222222112567788999998
Q ss_pred c
Q 002166 349 L 349 (957)
Q Consensus 349 ~ 349 (957)
.
T Consensus 105 ~ 105 (164)
T 3e8m_A 105 L 105 (164)
T ss_dssp G
T ss_pred H
Confidence 6
No 230
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=49.58 E-value=8.2 Score=40.42 Aligned_cols=28 Identities=29% Similarity=0.471 Sum_probs=19.2
Q ss_pred eEEEeCccchhhh-c-cccchHHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVA-N-TMRSFEDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A-~-t~~~~e~ri~~l~~~~ 173 (957)
.|+|||||||+.. . ++ -+..+++|+++.
T Consensus 29 li~~DlDGTLl~~~~~~i--s~~~~~al~~l~ 58 (301)
T 2b30_A 29 LLLIDFDGTLFVDKDIKV--PSENIDAIKEAI 58 (301)
T ss_dssp EEEEETBTTTBCCTTTCS--CHHHHHHHHHHH
T ss_pred EEEEECCCCCcCCCCCcc--CHHHHHHHHHHH
Confidence 5899999999965 2 22 244567776654
No 231
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=47.61 E-value=11 Score=38.04 Aligned_cols=12 Identities=42% Similarity=0.504 Sum_probs=10.9
Q ss_pred eEEEeCccchhh
Q 002166 144 GIVFDLDETLIV 155 (957)
Q Consensus 144 ~lV~DLDeTLi~ 155 (957)
.|++||||||+.
T Consensus 3 li~~DlDGTLl~ 14 (239)
T 1u02_A 3 LIFLDYDGTLVP 14 (239)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEecCCCCcC
Confidence 589999999996
No 232
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=47.47 E-value=6.6 Score=39.93 Aligned_cols=36 Identities=17% Similarity=-0.003 Sum_probs=23.9
Q ss_pred HHhhcceeeEEEeCccchhhhccccchHHHHHHHHhhhc
Q 002166 136 TMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKIS 174 (957)
Q Consensus 136 ~ml~~r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~~ 174 (957)
.++..-+ .++|||||||+.... .++.-+++|+++..
T Consensus 9 ~~~~~~k-~i~~D~DGtL~~~~~--~~~~~~~~l~~l~~ 44 (284)
T 2hx1_A 9 SLLPKYK-CIFFDAFGVLKTYNG--LLPGIENTFDYLKA 44 (284)
T ss_dssp HHGGGCS-EEEECSBTTTEETTE--ECTTHHHHHHHHHH
T ss_pred HHHhcCC-EEEEcCcCCcCcCCe--eChhHHHHHHHHHH
Confidence 3444443 689999999997544 35666667766543
No 233
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=45.70 E-value=11 Score=33.19 Aligned_cols=11 Identities=27% Similarity=0.498 Sum_probs=9.7
Q ss_pred eEEEeCccchh
Q 002166 144 GIVFDLDETLI 154 (957)
Q Consensus 144 ~lV~DLDeTLi 154 (957)
+|+||+|+||.
T Consensus 4 ~i~~D~DgtL~ 14 (137)
T 2pr7_A 4 GLIVDYAGVLD 14 (137)
T ss_dssp EEEECSTTTTS
T ss_pred EEEEeccceec
Confidence 58999999994
No 234
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=45.26 E-value=7.4 Score=40.27 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=24.3
Q ss_pred HHhhcceeeEEEeCccchhhhccccchHHHHHHHHhhhc
Q 002166 136 TMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKIS 174 (957)
Q Consensus 136 ~ml~~r~L~lV~DLDeTLi~A~t~~~~e~ri~~l~~~~~ 174 (957)
.++..-+ .|+|||||||+.... -++.-+++++.+..
T Consensus 16 ~~~~~~k-~i~~D~DGTL~~~~~--~~~~~~~~l~~l~~ 51 (306)
T 2oyc_A 16 DVLGRAQ-GVLFDCDGVLWNGER--AVPGAPELLERLAR 51 (306)
T ss_dssp HHHHHCS-EEEECSBTTTEETTE--ECTTHHHHHHHHHH
T ss_pred HHHhhCC-EEEECCCCcEecCCc--cCcCHHHHHHHHHH
Confidence 4444444 689999999997543 36666777766543
No 235
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=42.29 E-value=9.7 Score=38.20 Aligned_cols=28 Identities=21% Similarity=0.220 Sum_probs=18.2
Q ss_pred eEEEeCccchhhhccccch-HHHHHHHHhhh
Q 002166 144 GIVFDLDETLIVANTMRSF-EDRIEALLRKI 173 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~-e~ri~~l~~~~ 173 (957)
.|++||||||+... ..+ +..+++|+++.
T Consensus 7 li~~DlDGTLl~~~--~~i~~~~~~~l~~l~ 35 (227)
T 1l6r_A 7 LAAIDVDGNLTDRD--RLISTKAIESIRSAE 35 (227)
T ss_dssp EEEEEHHHHSBCTT--SCBCHHHHHHHHHHH
T ss_pred EEEEECCCCCcCCC--CcCCHHHHHHHHHHH
Confidence 58999999999653 233 33455565543
No 236
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=39.81 E-value=10 Score=38.16 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=18.6
Q ss_pred eEEEeCccchhhhccccchHHHHHHHHhh
Q 002166 144 GIVFDLDETLIVANTMRSFEDRIEALLRK 172 (957)
Q Consensus 144 ~lV~DLDeTLi~A~t~~~~e~ri~~l~~~ 172 (957)
+++|||||||+.... .++.-++++++.
T Consensus 3 ~i~~D~DGtL~~~~~--~~~~~~~~l~~l 29 (263)
T 1zjj_A 3 AIIFDMDGVLYRGNR--AIPGVRELIEFL 29 (263)
T ss_dssp EEEEECBTTTEETTE--ECTTHHHHHHHH
T ss_pred EEEEeCcCceEeCCE--eCccHHHHHHHH
Confidence 689999999996543 245555665544
No 237
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=37.04 E-value=67 Score=37.11 Aligned_cols=84 Identities=10% Similarity=0.106 Sum_probs=54.6
Q ss_pred cceEEEeecCCcCCCCcchhhhhcccCceeEeeccCCC---ccHHHHHHHHHhhhcccceEeec--CCCceeEEEEeeec
Q 002166 38 DEIRISYFSEASERCPPLAVLHTITASGICFKMESKSS---DNIQLHLLHSSCIRENKTAVMPL--GLTEELHLVAMYSR 112 (957)
Q Consensus 38 ~~~~i~~~~~~~e~~~pl~~lh~i~~~~~~~~~~~~~~---~~~~l~~lh~~c~~e~ktav~~~--~~~~elhlva~~~~ 112 (957)
+.|+|.+|-+.+ ..+|. |.+. ..+|-+.+... -..++..|+..|.+.+|.||++. ..+.+-+|||+...
T Consensus 338 ~~l~ilgFv~~~-~i~~~---~~~~--~s~y~l~p~~~~~~s~~af~aL~~al~~~~kvaIar~v~r~~~~p~l~aL~P~ 411 (565)
T 1jey_B 338 KCFSVLGFCKSS-QVQRR---FFMG--NQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDKRANPQVGVAFPH 411 (565)
T ss_dssp SEEEEEEEEEGG-GSCGG---GCEE--EEEEEEEECTTCHHHHHHHHHHHHHHHHTTEEEEEEEESSSSSCCEEEEEEEE
T ss_pred CcEEEEeeccHH-HCCHh---hccC--CceEEEeCCCCChhhHHHHHHHHHHHHHCCCEEEEEEEEcCCCCcEEEEEecc
Confidence 667777774433 23332 2221 12344544332 28899999999999999999988 44667899999876
Q ss_pred CCCCCccEEEEEeecc
Q 002166 113 NNEKQYPCFWAFSVGS 128 (957)
Q Consensus 113 ~~~~~~p~F~~~~~~~ 128 (957)
..+ ..+|||....+.
T Consensus 412 ~~~-~~~gl~l~~Lpf 426 (565)
T 1jey_B 412 IKH-NYECLVYVQLPF 426 (565)
T ss_dssp ECS-SCEEEEEEECCC
T ss_pred ccC-CCCeEEEEccCC
Confidence 432 347887766653
No 238
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=33.82 E-value=13 Score=38.38 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=12.2
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
+|+||+||||+...
T Consensus 34 ~viFD~dGTL~ds~ 47 (287)
T 3a1c_A 34 AVIFDKTGTLTKGK 47 (287)
T ss_dssp EEEEECCCCCBCSC
T ss_pred EEEEeCCCCCcCCC
Confidence 79999999999754
No 239
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=31.53 E-value=96 Score=36.30 Aligned_cols=86 Identities=14% Similarity=0.098 Sum_probs=57.1
Q ss_pred cccceEEEeecCCcCCCCcchhhhhcccCceeEeeccCC----CccHHHHHHHHHhhhcccceEeec--CCCceeEEEEe
Q 002166 36 VFDEIRISYFSEASERCPPLAVLHTITASGICFKMESKS----SDNIQLHLLHSSCIRENKTAVMPL--GLTEELHLVAM 109 (957)
Q Consensus 36 ~~~~~~i~~~~~~~e~~~pl~~lh~i~~~~~~~~~~~~~----~~~~~l~~lh~~c~~e~ktav~~~--~~~~elhlva~ 109 (957)
-.+.|+|.+|-+.++ -||. |.+. ...| +.+.. .-..++..|+..|.+.+|.||++. ..+.+-+|||+
T Consensus 341 ~~~~i~ilgFv~~~~-i~~~---~~~~--~~~~-l~P~~~~~~~s~~afsaL~~al~~~~kvaIar~v~r~~~~p~l~aL 413 (609)
T 1jey_A 341 DDPGLMLMGFKPLVL-LKKH---HYLR--PSLF-VYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVAL 413 (609)
T ss_dssp SCSEEEEEEEEEGGG-SCGG---GCCS--CCEE-EEECTTTEETHHHHHHHHHHHHHHTTEEEEEEEECSSSCCCEEEEE
T ss_pred CCCceEEEeecchHh-Cchh---hccC--CceE-EecCCCCccchHHHHHHHHHHHHhcCcEEEEEEEecCCCCCEEEEE
Confidence 467788888865432 2222 3322 2233 44433 238899999999999999999987 54677999999
Q ss_pred eecCCC----C---CccEEEEEeecc
Q 002166 110 YSRNNE----K---QYPCFWAFSVGS 128 (957)
Q Consensus 110 ~~~~~~----~---~~p~F~~~~~~~ 128 (957)
.....+ . ..+|||....+.
T Consensus 414 ~P~~~~~d~~~~q~~~~gl~l~~Lpf 439 (609)
T 1jey_A 414 VPQEEELDDQKIQVTPPGFQLVFLPF 439 (609)
T ss_dssp EEECCEECTTCCEEECSEEEEEECCC
T ss_pred eCccccccccCCcCCCCeeEEEecCc
Confidence 886531 0 235888776663
No 240
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=31.13 E-value=14 Score=35.60 Aligned_cols=67 Identities=12% Similarity=0.065 Sum_probs=40.4
Q ss_pred HHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEEEEcCC
Q 002166 269 LRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDR 348 (957)
Q Consensus 269 Lr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~~mvVIIDDR 348 (957)
+++.|+ +.-+.++|+|++.+.++..+++.++=+ .+|. . .+ .....+..+.......++-+++|+|+
T Consensus 61 ~l~~L~---~~g~~v~ivT~~~~~~~~~~l~~lgl~-~~~~-----~----~k-pk~~~~~~~~~~~g~~~~~~~~iGD~ 126 (188)
T 2r8e_A 61 GIRCAL---TSDIEVAIITGRKAKLVEDRCATLGIT-HLYQ-----G----QS-NKLIAFSDLLEKLAIAPENVAYVGDD 126 (188)
T ss_dssp HHHHHH---TTTCEEEEECSSCCHHHHHHHHHHTCC-EEEC-----S----CS-CSHHHHHHHHHHHTCCGGGEEEEESS
T ss_pred HHHHHH---HCCCeEEEEeCCChHHHHHHHHHcCCc-eeec-----C----CC-CCHHHHHHHHHHcCCCHHHEEEECCC
Confidence 344665 456999999999999999999986533 2333 1 11 12222333332111456678888887
Q ss_pred c
Q 002166 349 L 349 (957)
Q Consensus 349 ~ 349 (957)
.
T Consensus 127 ~ 127 (188)
T 2r8e_A 127 L 127 (188)
T ss_dssp G
T ss_pred H
Confidence 5
No 241
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=30.76 E-value=16 Score=34.28 Aligned_cols=13 Identities=23% Similarity=0.215 Sum_probs=11.1
Q ss_pred eEEEeCccchhhh
Q 002166 144 GIVFDLDETLIVA 156 (957)
Q Consensus 144 ~lV~DLDeTLi~A 156 (957)
+++||+|+||+.-
T Consensus 3 ~v~~D~DGtL~~~ 15 (179)
T 3l8h_A 3 LIILDRDGVVNQD 15 (179)
T ss_dssp EEEECSBTTTBCC
T ss_pred EEEEcCCCccccC
Confidence 5899999999954
No 242
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=30.20 E-value=26 Score=36.25 Aligned_cols=40 Identities=20% Similarity=0.288 Sum_probs=35.5
Q ss_pred EeeCcChHHHHHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002166 260 VRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 302 (957)
Q Consensus 260 vKLRPgv~eLr~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLD 302 (957)
+++||++.++..+|. ..-+.++|.|-|....|..|++-+-
T Consensus 140 i~l~~g~~e~i~~l~---~~gi~v~ivSgg~~~~i~~i~~~~g 179 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQ---QHGIPVFIFSAGIGDVLEEVIRQAG 179 (297)
T ss_dssp CCBCBTHHHHHHHHH---HTTCCEEEEEEEEHHHHHHHHHHTT
T ss_pred CCCCCcHHHHHHHHH---HcCCeEEEEeCCcHHHHHHHHHHcC
Confidence 578999999888887 5678999999999999999999863
No 243
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=29.67 E-value=20 Score=35.00 Aligned_cols=30 Identities=17% Similarity=0.078 Sum_probs=25.0
Q ss_pred HHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002166 270 RSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 302 (957)
Q Consensus 270 r~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLD 302 (957)
+..|+ ..-|.+.|.|++.+..+..+++.+.
T Consensus 55 l~~L~---~~g~~~~ivTn~~~~~~~~~l~~lg 84 (191)
T 3n1u_A 55 LKLLM---AAGIQVAIITTAQNAVVDHRMEQLG 84 (191)
T ss_dssp HHHHH---HTTCEEEEECSCCSHHHHHHHHHHT
T ss_pred HHHHH---HCCCeEEEEeCcChHHHHHHHHHcC
Confidence 45665 4568999999999999999999864
No 244
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=29.44 E-value=17 Score=36.10 Aligned_cols=30 Identities=13% Similarity=0.065 Sum_probs=25.0
Q ss_pred HHHHhhhccccEEEEEEeCCcHHHHHHHHHhhC
Q 002166 270 RSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 302 (957)
Q Consensus 270 r~FL~a~~sk~FEl~VyTmGtR~YA~~I~rlLD 302 (957)
+.+|+ ..-|.+.|.|++.+..+..+++.|.
T Consensus 61 l~~L~---~~G~~~~ivT~~~~~~~~~~l~~lg 90 (195)
T 3n07_A 61 VKALM---NAGIEIAIITGRRSQIVENRMKALG 90 (195)
T ss_dssp HHHHH---HTTCEEEEECSSCCHHHHHHHHHTT
T ss_pred HHHHH---HCCCEEEEEECcCHHHHHHHHHHcC
Confidence 34665 4568999999999999999999864
No 245
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=28.23 E-value=46 Score=32.00 Aligned_cols=14 Identities=21% Similarity=0.275 Sum_probs=11.6
Q ss_pred eeEEEeCccchhhh
Q 002166 143 LGIVFDLDETLIVA 156 (957)
Q Consensus 143 L~lV~DLDeTLi~A 156 (957)
=.++||+|+||+..
T Consensus 27 k~vifD~DGTL~~~ 40 (188)
T 2r8e_A 27 RLLILDVDGVLSDG 40 (188)
T ss_dssp SEEEECCCCCCBCS
T ss_pred CEEEEeCCCCcCCC
Confidence 36899999999853
No 246
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=28.11 E-value=18 Score=35.27 Aligned_cols=13 Identities=23% Similarity=0.342 Sum_probs=11.4
Q ss_pred eEEEeCccchhhh
Q 002166 144 GIVFDLDETLIVA 156 (957)
Q Consensus 144 ~lV~DLDeTLi~A 156 (957)
+++||+|+||+..
T Consensus 21 ~vifD~DGtL~~~ 33 (191)
T 3n1u_A 21 CLICDVDGVLSDG 33 (191)
T ss_dssp EEEECSTTTTBCS
T ss_pred EEEEeCCCCCCCC
Confidence 7899999999863
No 247
>2qvw_A GLP_546_48378_50642; dicer, RNAI,pseudo-merohedral twin, hydrolase; 3.00A {Giardia intestinalis} PDB: 2ffl_A
Probab=26.87 E-value=8.5 Score=46.60 Aligned_cols=41 Identities=12% Similarity=0.104 Sum_probs=33.7
Q ss_pred CCc-hHHHHHHHHhcCCCeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHH---------HHHHHHHHHHHHh
Q 002166 705 ETP-SGVLQDIAMKCGTKVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQ---------RQAAEGSIKHLAN 772 (957)
Q Consensus 705 ~n~-KS~LQE~~QK~~~~~~Y~~v~~~~Hdk~FtveV~I~G~~~GeG~GkSKKEAE---------q~AAk~AL~~L~~ 772 (957)
..+ |+.||||+| |+.++.|.|.+.+.|| -.||+.||++|..
T Consensus 447 ~Dp~Kt~LqE~~q---------------------------~~~ia~~v~~~~~~ak~~~~~~~~~~~aa~~aL~~l~~ 497 (756)
T 2qvw_A 447 PDAVTKASKRVCM---------------------------GEAGAHEFRSLVDYACEQGISVFCSSRVSTMFLERLRD 497 (756)
T ss_dssp CHHHHHHHHHHHT---------------------------SCCCHHHHHHHHHHTTTTTCCCBSSSHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHh---------------------------ccchhhhhhhhhhHHhhhccccchhhHHHHHHHHhhcc
Confidence 346 999999997 4445788999999999 6899999988854
No 248
>3k6q_A Putative ligand binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Syntrophomonas wolfei subsp}
Probab=26.12 E-value=1.4e+02 Score=29.43 Aligned_cols=58 Identities=14% Similarity=0.127 Sum_probs=44.9
Q ss_pred CchHHHHHHHHhcCCCeEEEEeeecCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHH
Q 002166 706 TPSGVLQDIAMKCGTKVEFRPALVASTELQFSIEAWFAGEKIGEGIGRTRREAQRQAAEGSIKHLA 771 (957)
Q Consensus 706 n~KS~LQE~~QK~~~~~~Y~~v~~~~Hdk~FtveV~I~G~~~GeG~GkSKKEAEq~AAk~AL~~L~ 771 (957)
.....|-|++ ..++..++.+.+++ ++.+.+++-.+ .|.|.|+.+|..+.+++.++--+
T Consensus 39 is~~lL~~~L--~~y~f~~e~i~EdG-----s~t~~l~eldi-~~~g~T~eeA~~~li~~l~eYAe 96 (139)
T 3k6q_A 39 FSEQIIKDLL--QDLKIHAELSKEDG-----IIIGTIDGFDL-VVSGESEQEVIQKLAEDLLEYAQ 96 (139)
T ss_dssp EEHHHHHHHT--TTCCEEEEEEEETT-----EEEEEETTTCC-EEEESSHHHHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHH--hcccCceEEEecCC-----eEEEEecCcee-EeeCCCHHHHHHHHHHHHHHHHH
Confidence 5678888998 55666666655533 57888999888 89999999999999988877654
No 249
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=25.66 E-value=41 Score=31.07 Aligned_cols=14 Identities=21% Similarity=0.176 Sum_probs=11.8
Q ss_pred eEEEeCccchhhhc
Q 002166 144 GIVFDLDETLIVAN 157 (957)
Q Consensus 144 ~lV~DLDeTLi~A~ 157 (957)
+++||+||||+...
T Consensus 6 ~vifD~DGTL~~~~ 19 (164)
T 3e8m_A 6 LILTDIDGVWTDGG 19 (164)
T ss_dssp EEEECSTTTTSSSE
T ss_pred EEEEcCCCceEcCc
Confidence 68999999999643
No 250
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=24.43 E-value=24 Score=34.43 Aligned_cols=63 Identities=14% Similarity=0.024 Sum_probs=33.9
Q ss_pred HHHHhhhccccEEEEEEeCCcHHHHHHHHH--hhCCCCCccccccccCeEEeccCCCccchhhhccCCCCCCcEEEEEcC
Q 002166 270 RSYLTARGRKRFEVYVCTMAERDYALEMWR--LLDPESNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDD 347 (957)
Q Consensus 270 r~FL~a~~sk~FEl~VyTmGtR~YA~~I~r--lLDP~g~lFg~~~l~~RIisr~sg~~KsL~~lfp~g~~~~~mvVIIDD 347 (957)
+..|+ ..-+.+.|.|.. ..+..+++ -|+-+ +|. . . .+....|..+.......++-++.|.|
T Consensus 45 L~~Lk---~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--~~~-----g----~-~~K~~~l~~~~~~~gi~~~~~~~vGD 107 (168)
T 3ewi_A 45 ISLLK---KSGIEVRLISER--ACSKQTLSALKLDCK--TEV-----S----V-SDKLATVDEWRKEMGLCWKEVAYLGN 107 (168)
T ss_dssp HHHHH---HTTCEEEEECSS--CCCHHHHHTTCCCCC--EEC-----S----C-SCHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHH---HCCCEEEEEeCc--HHHHHHHHHhCCCcE--EEE-----C----C-CChHHHHHHHHHHcCcChHHEEEEeC
Confidence 34565 456788999977 67888887 44433 332 1 1 11122233333222245666777777
Q ss_pred Cc
Q 002166 348 RL 349 (957)
Q Consensus 348 R~ 349 (957)
..
T Consensus 108 ~~ 109 (168)
T 3ewi_A 108 EV 109 (168)
T ss_dssp SG
T ss_pred CH
Confidence 64
No 251
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=23.91 E-value=26 Score=34.65 Aligned_cols=11 Identities=18% Similarity=0.344 Sum_probs=9.1
Q ss_pred eEEEeCccchh
Q 002166 144 GIVFDLDETLI 154 (957)
Q Consensus 144 ~lV~DLDeTLi 154 (957)
+|+||+||||+
T Consensus 27 ~vifD~DGtL~ 37 (195)
T 3n07_A 27 LLICDVDGVFS 37 (195)
T ss_dssp EEEECSTTTTS
T ss_pred EEEEcCCCCcC
Confidence 78888888887
No 252
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=23.88 E-value=24 Score=33.79 Aligned_cols=12 Identities=33% Similarity=0.648 Sum_probs=10.8
Q ss_pred eEEEeCccchhh
Q 002166 144 GIVFDLDETLIV 155 (957)
Q Consensus 144 ~lV~DLDeTLi~ 155 (957)
+|+||+|+||+.
T Consensus 5 ~vifD~DgtL~~ 16 (189)
T 3ib6_A 5 HVIWDMGETLNT 16 (189)
T ss_dssp EEEECTBTTTBC
T ss_pred EEEEcCCCceee
Confidence 589999999976
No 253
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=23.01 E-value=65 Score=34.58 Aligned_cols=28 Identities=32% Similarity=0.456 Sum_probs=24.6
Q ss_pred EEEEEeecCCHHHHHHHHHHHHHHHHHhh
Q 002166 745 EKIGEGIGRTRREAQRQAAEGSIKHLANV 773 (957)
Q Consensus 745 ~~~GeG~GkSKKEAEq~AAk~AL~~L~~~ 773 (957)
-++|.|.|+|-.+|+.+| +.||+.+...
T Consensus 212 lkvGIGiG~TA~~Ae~~A-~~ALe~~R~~ 239 (268)
T 2qv6_A 212 LKAGIGIGRTAEDASNLA-DIGLEKIRGK 239 (268)
T ss_dssp EEEEEEEESSHHHHHHHH-HHHHHHHHTT
T ss_pred EEEeeccCCCHHHHHHHH-HHHHHHHHhc
Confidence 467999999999999998 8899998764
No 254
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=20.22 E-value=52 Score=32.09 Aligned_cols=14 Identities=29% Similarity=0.361 Sum_probs=11.6
Q ss_pred eeEEEeCccchhhh
Q 002166 143 LGIVFDLDETLIVA 156 (957)
Q Consensus 143 L~lV~DLDeTLi~A 156 (957)
=.++||+|+||+..
T Consensus 32 k~i~~D~DGtl~~~ 45 (218)
T 2o2x_A 32 PALFLDRDGTINVD 45 (218)
T ss_dssp CCEEECSBTTTBCC
T ss_pred CEEEEeCCCCcCCC
Confidence 35889999999965
Done!