BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002168
(957 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356538883|ref|XP_003537930.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
Length = 970
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/1007 (55%), Positives = 673/1007 (66%), Gaps = 94/1007 (9%)
Query: 3 PPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVY 62
P P+K R +D+ APPS+NLWVGNL+AD TDADL ELF K+GALD VT+YS+RS+AFV+
Sbjct: 2 PLPAKPMRDFDE-SAPPSNNLWVGNLAADVTDADLMELFAKYGALDSVTSYSARSYAFVF 60
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFG 122
FKRVEDAKAAK+ALQG+ RG+ +KIEFARPAK K LWVGGISQ V+KE+LE F KFG
Sbjct: 61 FKRVEDAKAAKNALQGTSLRGSSLKIEFARPAKACKQLWVGGISQAVTKEDLEAEFHKFG 120
Query: 123 NIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
IEDFKF +D NTA VE+ LEDA +A+K +NG++IGGE +RVDFLRSQ ++R+Q +
Sbjct: 121 TIEDFKFFRDRNTACVEFFNLEDACQAMKIMNGKRIGGEHIRVDFLRSQSTKRDQLLDY- 179
Query: 183 DARDGPIIGRGTGFSDNHSAYKRS-HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
G G+ G +D +S KR H Q +GR D PS ILW+GYPP+VQ+DEQMLHN
Sbjct: 180 ----GQFQGKNLGPTDAYSGQKRPLHSQPPMGRKGDSQPSNILWIGYPPAVQIDEQMLHN 235
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK 301
AMILFGEIERIKS+PSRNYS VEFRSVDEARRAKEGLQGRLFNDPRITIM+S S+L PG
Sbjct: 236 AMILFGEIERIKSFPSRNYSIVEFRSVDEARRAKEGLQGRLFNDPRITIMYSISDLVPGS 295
Query: 302 DYPGSYSGTKGPRSEMFFGDQ-IRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRS 360
DYPG + G+ GP+ ++ D RP Q+D G N+ M PNNF G L P+ I GP++PMR
Sbjct: 296 DYPGFFPGSNGPKPDVLLNDHPFRPLQMDAFGHNRPMGPNNFPGQLPPSGIMGPNIPMRP 355
Query: 361 IGAHGGHETLLSGPDFKD---FHSMQDPNAK-NLDPNWRRPS-PSPGIRTSPTQGIRQPL 415
G H G E+++SGP+F + H QD ++K ++ PNW+RPS P+PG+ +SP G R P
Sbjct: 356 FGPHSGVESVISGPEFNEINALHKFQDGSSKSSMGPNWKRPSPPAPGMLSSPAPGARLPT 415
Query: 416 NHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGP 475
G+WDV D N RDSKR R+DG +P+D+ FP R IDD G
Sbjct: 416 RSTSGAWDVLDINHIPRDSKRSRIDGPLPVDEGPFPLRNIDDRG---------------- 459
Query: 476 ASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGI 535
L PV+S++TAG G D D IWRG+IAKGGTPVCRARCVP GKGI
Sbjct: 460 ------------HLGPVSSRITAGVHGVAQPDIDHIWRGVIAKGGTPVCRARCVPIGKGI 507
Query: 536 ESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGV 595
+ELP+VV+CSARTGLD+L KHYA+AIGFDIVFFLPDSEDDFASYTEFLRYL +KNRAGV
Sbjct: 508 GTELPDVVDCSARTGLDILTKHYADAIGFDIVFFLPDSEDDFASYTEFLRYLSAKNRAGV 567
Query: 596 AKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLP--------QQA--MVPPQTVDK 645
AKF D TTLFLVPPSDFL++VLKV GPERLYGVVLK P QQ + P T
Sbjct: 568 AKFVDNTTLFLVPPSDFLTRVLKVTGPERLYGVVLKFPPVPSSAPMQQPSHLRVPTTQYM 627
Query: 646 QNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSN 705
Q IPP EYGL KEEH+LP+DYNR H+DSK+ +K +P P HS DY N
Sbjct: 628 QQIPPSQTEYGLIPVKEEHILPMDYNRPLHEDSKLPAKPVYPPTGGPPPVHSGPPDYAPN 687
Query: 706 NAAAISQAGVKLTPELIATLTSLI------PATKSAEVAPGSSSARPLL--AEPHVQSIE 757
N A SQAGV LTPELIATL S + PAT A+ A GSS+ +P P+ +
Sbjct: 688 NTVAGSQAGVALTPELIATLASFLPTTTQSPATDGAKSAVGSSTMKPPFPPMTPNDGNQS 747
Query: 758 QLGNHYNPQAQSLTH-----------HYASMSSTPSHSA------QMLLGNNQLQESTAS 800
L N A TH H A P SA Q++ G++ +Q++ AS
Sbjct: 748 HLWKQDNQIADQSTHPPQQLRSMYNIHNAHYQPYPPASAPSGNPSQVVSGSSHIQDTAAS 807
Query: 801 LSQQGMVYSRPLPNFSIAPQAAPVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGS 860
+ QQG V SR +PNF + Q+ VAVSP Q YQ ++QKG+G++QGT+AS LY S
Sbjct: 808 MQQQGAVSSRHMPNFMMPTQSGQVAVSPHASQNYQVEVSPSNQKGFGVVQGTDASVLYNS 867
Query: 861 SVFQQPNNPT----------AVSNQV---NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVL 907
FQQPNN + A+SNQV N SQ Q M +VD+VN + PN QQL +
Sbjct: 868 QAFQQPNNNSLAFQQPNNSFALSNQVNSTNASQQQTAMPYTVDQVNPDTPN--QQLP--M 923
Query: 908 SGAGQGTSDGEVDKNQRYQSTLQFAANLLLQIQQQQQTNSPAGRGTG 954
G QG ++ E DKNQRYQSTLQFAANLLLQ QQQQ +P G G G
Sbjct: 924 FGVSQGQTEVEADKNQRYQSTLQFAANLLLQ-IQQQQQQAPGGHGPG 969
>gi|449471899|ref|XP_004153439.1| PREDICTED: flowering time control protein FPA-like [Cucumis sativus]
Length = 1000
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1014 (53%), Positives = 676/1014 (66%), Gaps = 75/1014 (7%)
Query: 3 PPPSKFNR-AYDDKEAP--PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFA 59
P P K +R + D + P PS++LWVGNLS + TD DL LF +FG +D VT+Y SRS+A
Sbjct: 2 PLPPKLSRPLHRDSDVPEMPSNSLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSYA 61
Query: 60 FVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFL 119
F++FK +EDA+AAK+ALQG RGN IKIEFARPAKP ++LWVGGIS VS+E+LEE F
Sbjct: 62 FIFFKHMEDAQAAKEALQGYFLRGNSIKIEFARPAKPCRNLWVGGISPAVSREQLEEEFS 121
Query: 120 KFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
KFG I++FKFL+D NTAFVEY RLEDA++AL+ +NG++IGGEQLRVDFLRSQP RR+QWP
Sbjct: 122 KFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNGKRIGGEQLRVDFLRSQPMRRDQWP 181
Query: 180 NSHDARDGPIIGRGTGFSDNHSAYKRS-HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
++ D G + R G D S YKR H QSS R RDGPPSK+LW+GYPPSVQ+DEQM
Sbjct: 182 DTRDGH-GQLQARNMGMGDFQSGYKRPLHAQSSEVR-RDGPPSKVLWIGYPPSVQIDEQM 239
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELA 298
LHNAMILFGEIERI S+ SR+++FVEFRSVDEARRAKEGLQGRLFNDPRITIMFS+S+
Sbjct: 240 LHNAMILFGEIERITSFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPG 299
Query: 299 PGKDYPGSYSGTKGPRSEMFFGD-QIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMP 357
P K++PG Y G K R +MFF + QIRP +D+LG M N F G L + I GP+
Sbjct: 300 PVKEHPGFYPGGKEARPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTG 359
Query: 358 MRSIGAHGGHETLLSGPDFKDF---HSMQDPNAKNL-DPNWRRPSP-SPGIRTSPTQGIR 412
+R +F D HS QD N+KN+ PNWRR SP +PGI +SP GIR
Sbjct: 360 VRPPPFGPPPGISGPP-EFNDLATSHSFQDANSKNMMGPNWRRQSPPAPGILSSPATGIR 418
Query: 413 QP--LNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGS 470
P + P SWDV D NQFQRDSKR R+DG ++D +FP RK+D+ + DQ YG+G
Sbjct: 419 PPPPVRSTPNSWDVLDVNQFQRDSKRSRIDGPPSLEDVSFPPRKMDNRSMGFDQQYGIGP 478
Query: 471 ITGGPASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVP 530
I+ G +S + N + P+ ++ G G++ ++DFIWRGIIAKGGTPVC ARCVP
Sbjct: 479 ISDGGSSVPYANAPAKTPPIPIGTRAPISGPGQSHAENDFIWRGIIAKGGTPVCHARCVP 538
Query: 531 FGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSK 590
G+GI SELPEVVNCSARTGLD L KHYAEA GFDIVFFLPDSEDDFASYTEFLRYLG+K
Sbjct: 539 IGEGIGSELPEVVNCSARTGLDQLTKHYAEATGFDIVFFLPDSEDDFASYTEFLRYLGAK 598
Query: 591 NRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKL---------PQQAMVPPQ 641
NRAGVAKFDDGTT+FLVPPS+FL KVLKV GPERLYG+VLK PQQ+ +P
Sbjct: 599 NRAGVAKFDDGTTMFLVPPSEFLRKVLKVSGPERLYGLVLKFPQVSVSEPAPQQSYLPVS 658
Query: 642 TVD---KQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSS 698
T D +Q++ P EYG K+E + P+DY+R HD+ K K PL+ S
Sbjct: 659 TSDYGERQHVLPSQTEYGSVPSKQEQLPPMDYSRVLHDEIKEPPK--------PLLPTSE 710
Query: 699 SMDY-GSNNAAAISQAGVKLTPELIATLTSLIPA---TKSAEVA---------------- 738
+Y G+NN A ISQAG+ LTPELIATL SL+P + S E A
Sbjct: 711 PQEYSGNNNTATISQAGLALTPELIATLVSLLPGKTQSSSLESAKQPAVSPQPPVPIPPV 770
Query: 739 ---PGSSSARPLL----AEPHVQSIEQLGNHYNPQAQSLTHH--YASMSSTPSHSAQMLL 789
G++S ++ ++ + Q +Q+GNH+NPQ QSL+ Y + TP+ A +
Sbjct: 771 VSNKGATSEGWMVGHQSSDLNGQPFQQMGNHFNPQGQSLSQFQPYPPLPQTPNQHAPQAI 830
Query: 790 GNNQLQESTASLSQQGMV--YSRPLPNFSIAP--QAAPVAVSPPVHQQYQFAAPSNSQKG 845
G +Q+Q++ SL QQ V RPL +S P QA+ +A++ QYQ SQ+G
Sbjct: 831 GTSQIQDAAVSLPQQQQVPIPYRPLSTYSAPPENQASGLALA---SSQYQHDVSQMSQRG 887
Query: 846 YGMMQGTEASTLYGSSVFQQPNNPTAVSN--QVNLSQPQNVMTVSVDKVNLEHPNHVQQL 903
YG + G + S YG V QQ N +SN Q + +Q Q + ++ D+VN E P +Q L
Sbjct: 888 YGPVNGVDTSG-YGPPVMQQSTNTVTLSNHGQSSTTQSQPITQLASDRVNPELPYQMQHL 946
Query: 904 QSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLLL-QIQQQQQTNSPAGRGTGNQ 956
QS G G G SD E K+QRY+STLQFAANLLL QQQQQ AG G+GNQ
Sbjct: 947 QSANLGTGTGPSDVESGKDQRYRSTLQFAANLLLQIQQQQQQQQQQAGWGSGNQ 1000
>gi|449454582|ref|XP_004145033.1| PREDICTED: flowering time control protein FPA-like [Cucumis
sativus]
Length = 999
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/1013 (53%), Positives = 678/1013 (66%), Gaps = 74/1013 (7%)
Query: 3 PPPSKFNR-AYDDKEAP--PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFA 59
P P K +R + D + P PS++LWVGNLS + TD DL LF +FG +D VT+Y SRS+A
Sbjct: 2 PLPPKLSRPLHRDSDVPEMPSNSLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSYA 61
Query: 60 FVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFL 119
F++FK +EDA+AAK+ALQG RGN IKIEFARPAKP ++LWVGGIS VS+E+LEE F
Sbjct: 62 FIFFKHMEDAQAAKEALQGYFLRGNSIKIEFARPAKPCRNLWVGGISPAVSREQLEEEFS 121
Query: 120 KFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
KFG I++FKFL+D NTAFVEY RLEDA++AL+ +NG++IGGEQLRVDFLRSQP RR+QWP
Sbjct: 122 KFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNGKRIGGEQLRVDFLRSQPMRRDQWP 181
Query: 180 NSHDARDGPIIGRGTGFSDNHSAYKRS-HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
++ D G + R G D S YKR H QSS R RDGPPSK+LW+GYPPSVQ+DEQM
Sbjct: 182 DTRDGH-GQLQARNMGMGDFQSGYKRPLHAQSSEVR-RDGPPSKVLWIGYPPSVQIDEQM 239
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELA 298
LHNAMILFGEIERI S+ SR+++FVEFRSVDEARRAKEGLQGRLFNDPRITIMFS+S+
Sbjct: 240 LHNAMILFGEIERITSFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPG 299
Query: 299 PGKDYPGSYSGTKGPRSEMFFGD-QIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMP 357
P K++PG Y G K R +MFF + QIRP +D+LG M N F G L + I GP+
Sbjct: 300 PVKEHPGFYPGGKEARPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTG 359
Query: 358 MRSIGAHGGHETLLSGPDFKDF---HSMQDPNAKNL-DPNWRRPSP-SPGIRTSPTQGIR 412
+R +F D HS QD N+KN+ PNWRR SP +PGI +SP GIR
Sbjct: 360 VRPPPFGPPPGISGPP-EFNDLATSHSFQDANSKNMMGPNWRRQSPPAPGILSSPATGIR 418
Query: 413 QP--LNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGS 470
P + P SWDV D NQFQRDSKR R+DG ++D +FP RK+D+ + DQ YG+G
Sbjct: 419 PPPPVRSTPNSWDVLDVNQFQRDSKRSRIDGPPSLEDVSFPPRKMDNRSMGFDQQYGIGP 478
Query: 471 ITGGPASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVP 530
I+ G +S + N + P+ ++ G G++ ++DFIWRGIIAKGGTPVC ARCVP
Sbjct: 479 ISDGGSSVPYANAPAKTPPIPIGTRAPISGPGQSHAENDFIWRGIIAKGGTPVCHARCVP 538
Query: 531 FGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSK 590
G+GI SELPEVVNCSARTGLD L KHYAEA GFDIVFFLPDSEDDFASYTEFLRYLG+K
Sbjct: 539 IGEGIGSELPEVVNCSARTGLDQLTKHYAEATGFDIVFFLPDSEDDFASYTEFLRYLGAK 598
Query: 591 NRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKL---------PQQAMVPPQ 641
NRAGVAKFDDGTT+FLVPPS+FL KVLKV GPERLYG+VLK PQQ+ +P
Sbjct: 599 NRAGVAKFDDGTTMFLVPPSEFLRKVLKVSGPERLYGLVLKFPQVSVSEPAPQQSYLPVS 658
Query: 642 TVD---KQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSS 698
T D +Q++ P EYG K+E + P+DY+R HD+ K K PL+ S
Sbjct: 659 TSDYGERQHVLPSQTEYGSVPSKQEQLPPMDYSRVLHDEIKEPPK--------PLLPTSE 710
Query: 699 SMDY-GSNNAAAISQAGVKLTPELIATLTSLIPA---TKSAEVA---------------- 738
+Y G+NN A ISQAG+ LTPELIATL SL+P + S E A
Sbjct: 711 PQEYSGNNNTATISQAGLALTPELIATLVSLLPGKTQSSSLESAKQPAVSPQPPVPIPPV 770
Query: 739 ---PGSSSARPLL----AEPHVQSIEQLGNHYNPQAQSLTHH--YASMSSTPSHSAQMLL 789
G++S ++ ++ + Q +Q+GNH+NPQ QSL+ Y + TP+ A +
Sbjct: 771 VSNKGATSEGWMVGHQSSDLNGQPFQQMGNHFNPQGQSLSQFQPYPPLPQTPNQHAPQAI 830
Query: 790 GNNQLQESTASLSQQGMV--YSRPLPNFSIAP--QAAPVAVSPPVHQQYQFAAPSNSQKG 845
G +Q+Q++ SL QQ V RPL +S P QA+ +A++ QYQ SQ+G
Sbjct: 831 GTSQIQDAAVSLPQQQQVPIPYRPLSTYSAPPENQASGLALA---SSQYQHDVSQMSQRG 887
Query: 846 YGMMQGTEASTLYGSSVFQQPNNPTAVSN--QVNLSQPQNVMTVSVDKVNLEHPNHVQQL 903
YG + G + S YG V QQ N +SN Q + +Q Q + ++ D+VN E P +Q L
Sbjct: 888 YGPVNGVDTSG-YGPPVMQQSTNTVTLSNHGQSSTTQSQPITQLASDRVNPELPYQMQHL 946
Query: 904 QSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLLLQIQQQQQTNSPAGRGTGNQ 956
QS G G G SD E K+QRY+STLQFAANLLLQIQQQQQ AG G+GNQ
Sbjct: 947 QSANLGTGTGPSDVESGKDQRYRSTLQFAANLLLQIQQQQQQQQQAGWGSGNQ 999
>gi|255577189|ref|XP_002529477.1| RNA recognition motif-containing protein, putative [Ricinus
communis]
gi|223531035|gb|EEF32887.1| RNA recognition motif-containing protein, putative [Ricinus
communis]
Length = 902
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/992 (54%), Positives = 651/992 (65%), Gaps = 130/992 (13%)
Query: 4 PPSKFNRAYDDKEAP--PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFV 61
PP KF+R + + + P PS+NLWVGNL+ D TD+DL +LF K+GALD VTTYSSRS+AF+
Sbjct: 3 PPMKFSRVHKESDEPEAPSNNLWVGNLAPDVTDSDLMDLFAKYGALDSVTTYSSRSYAFL 62
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKF 121
YFK VEDA AAKDALQG+ RGNP+KIEFARPAKPSK+LWVGGIS VSKE+LEE FLKF
Sbjct: 63 YFKHVEDAAAAKDALQGTLLRGNPVKIEFARPAKPSKNLWVGGISPAVSKEQLEEEFLKF 122
Query: 122 GNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
G IE+FKFL+D NTAF+EY +LEDA EA++++NG+++GG+Q+RVDFLRSQ RR
Sbjct: 123 GKIEEFKFLRDRNTAFIEYVKLEDALEAMRSMNGKRLGGDQIRVDFLRSQSVRR------ 176
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
++ F H Q+S GR ++GPPS +LWVGYPPSVQ+DEQMLHN
Sbjct: 177 --FTVSVLMPLFVMFQ---------HSQTSGGR-KEGPPSNVLWVGYPPSVQIDEQMLHN 224
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK 301
AMILFGEIERIKS+P+R+YSFVEFRSVDEARRAKEGLQGRLFNDPRI+IM+SSSELAPGK
Sbjct: 225 AMILFGEIERIKSFPARHYSFVEFRSVDEARRAKEGLQGRLFNDPRISIMYSSSELAPGK 284
Query: 302 DYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSI 361
+Y +G KGPR E+F N+++ P++ +R
Sbjct: 285 EYSSFNAGGKGPRPEIF---------------NENL----------------PNLQLRPF 313
Query: 362 GAHGGHETLLSGPDFKDF---HSMQDPNAK-NLDPNWRRPSP-SPGIRTSPTQGIRQPLN 416
G G + +LSG +F D HS +D N+ PNWRRPSP + GI SP +R P+
Sbjct: 314 GPQGSFDPVLSGAEFNDLAPLHSFRDGNSNIPTGPNWRRPSPPASGILPSPASRVRPPMR 373
Query: 417 HAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPA 476
WDV D +Q+QR+ KR R+D S+PID+ FPSR
Sbjct: 374 SVSTGWDVLDPSQYQREPKRSRLDASLPIDEDAFPSR----------------------- 410
Query: 477 SGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIE 536
NR P A AGG ++ ID DFIWRGIIAKGGTPVC ARCVP KG++
Sbjct: 411 ----------NRFGPPAD---AGGPHQHRIDHDFIWRGIIAKGGTPVCNARCVPLDKGMD 457
Query: 537 SELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVA 596
ELPEVVNCSARTGLDML KHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVA
Sbjct: 458 LELPEVVNCSARTGLDMLTKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVA 517
Query: 597 KFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQ-----AMVP--------PQTV 643
KFDDGTTLFLVPPSDFL+ VLKV GPERLYGVVLKLPQQ ++ P PQ +
Sbjct: 518 KFDDGTTLFLVPPSDFLTNVLKVKGPERLYGVVLKLPQQTPSSASIQPQLCQPNHIPQYM 577
Query: 644 DKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYG 703
D+ IPPP +Y KEE P+DYNR H+DSK SK+ +P A+E + S Y
Sbjct: 578 DRHQIPPPEIDYNQIARKEERFTPMDYNRILHEDSKPPSKIFYPPATESMTEQSVHQAYA 637
Query: 704 SNNAAAISQAGVKLTPELIATLTSLIPATKSAEVAPGSS--------SARPLLAEPHV-- 753
SN+ A+SQAGV TPELIA+LTSL+PA G R L H
Sbjct: 638 SNSTVAVSQAGVSWTPELIASLTSLLPANAQLSTLEGGQPVSGSLVVDKRTLHGWKHSGN 697
Query: 754 QSIEQLGNHYNPQAQS--LTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRP 811
S Q G+ +N ++Q+ L+ Y S+SS P+ S M+ G Q+Q+ + +L QG + SRP
Sbjct: 698 TSHMQYGSQFNSESQAPLLSQPYPSISSAPNSSEIMVPGTAQIQDFSVNLPHQGGIASRP 757
Query: 812 LPNFSIAPQAAPVAVSPPVHQQYQFAAPSNSQKGY-GMMQGTEASTLYGSSVFQQPNNPT 870
L + ++ Q VA+ P V QQYQ P QK Y GMM GTE S Y SV QQ NNP
Sbjct: 758 LNSVNLPSQGGQVALPPHVSQQYQLEVP--HQKAYSGMMHGTEGS--YSPSVIQQSNNPV 813
Query: 871 AVSNQV---NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQS 927
S+Q N SQ Q+ + +S DKVN E + QLQ+ A QGTS+ EVDKNQRYQS
Sbjct: 814 VFSSQAQGGNHSQTQSGLPLSSDKVNWEVSS---QLQTAPFVADQGTSEVEVDKNQRYQS 870
Query: 928 TLQFAAN--LLLQIQQQQQTNSPAGRGTGNQQ 957
TLQFAA+ L +Q QQQQQT +PA RG+GNQQ
Sbjct: 871 TLQFAASLLLQIQQQQQQQTGNPAVRGSGNQQ 902
>gi|356544510|ref|XP_003540693.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
Length = 909
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/1000 (52%), Positives = 640/1000 (64%), Gaps = 141/1000 (14%)
Query: 3 PPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVY 62
P P+K R +D+ A PS+NLWVGNL+AD TDADL ELF K+GALD VT+YS+RS+AFV+
Sbjct: 2 PFPAKPTRDFDE-SASPSNNLWVGNLAADVTDADLMELFAKYGALDSVTSYSARSYAFVF 60
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFG 122
FKRVEDAKAAK+ALQG+ RG+ +KIEFARPAK K LWVGGISQ V+KE+LE F KFG
Sbjct: 61 FKRVEDAKAAKNALQGTSLRGSSLKIEFARPAKACKQLWVGGISQAVTKEDLEAEFQKFG 120
Query: 123 NIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
IEDFKF +D NTA VE+ LEDA +A+K +NG++IGGE +RVDFLRSQ ++R
Sbjct: 121 KIEDFKFFRDRNTACVEFFNLEDATQAMKIMNGKRIGGEHIRVDFLRSQSTKRVSL---- 176
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+ + +H Q +G D PS ILW+GYPP+VQ+DEQMLHNA
Sbjct: 177 ---------------YFYMLFLFAHSQPPMGGKGDSQPSNILWIGYPPAVQIDEQMLHNA 221
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKD 302
MILFGEIERIKS+P RNYS VEFRSVDEARRAKEGLQGRLFNDPRITIM+SSS+L PG D
Sbjct: 222 MILFGEIERIKSFPLRNYSIVEFRSVDEARRAKEGLQGRLFNDPRITIMYSSSDLVPGSD 281
Query: 303 YPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIG 362
YP + G+ GPR ++F I G ++PMR G
Sbjct: 282 YPSFFPGSNGPRPDVF-------------------------------GIMGLNVPMRPFG 310
Query: 363 AHGGHETLLSGPDFKD---FHSMQDPNAK-NLDPNWRRPSPSPGIRTSPTQGIRQPLNHA 418
HGG E+++SGP+F + H QD ++K N+ PNW+RPSP P Q R P
Sbjct: 311 NHGGVESVISGPEFNEIDALHKFQDGSSKSNMGPNWKRPSP-------PAQSTRLPTRST 363
Query: 419 PGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASG 478
G+WDV D N RDSKR R+DG +P+ +A FP R IDD G
Sbjct: 364 SGAWDVLDKNHIPRDSKRSRIDGPLPVAEALFPFRNIDDRG------------------- 404
Query: 479 AFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESE 538
L PV+S++TAG D D IWRG+IAKGGTPVCRARCVP GKGI +E
Sbjct: 405 ---------HLGPVSSRITAGVHDIVQPDIDHIWRGVIAKGGTPVCRARCVPIGKGIGTE 455
Query: 539 LPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKF 598
LP VV+CSARTGLD+L KHYA+AIGFDIVFFLPDSEDDFASYTEFLRYL +KNRAGVAKF
Sbjct: 456 LPGVVDCSARTGLDILTKHYADAIGFDIVFFLPDSEDDFASYTEFLRYLSAKNRAGVAKF 515
Query: 599 DDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLP---------QQAMVP-PQTVDKQNI 648
D TTLFLVPPSDFL++VLKV GPERLYGVVLK P Q + +P P T Q+I
Sbjct: 516 VDNTTLFLVPPSDFLTRVLKVTGPERLYGVVLKFPPVPSSAPMQQPSHLPVPTTQYMQHI 575
Query: 649 PPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAA 708
PP EYGL KEE VLP+DYNR H+DSK+ +K +P A P HS DY +NN
Sbjct: 576 PPSQTEYGLIPVKEEQVLPMDYNRPLHEDSKLPAKPVYPPAGGPPPVHSGPPDYSTNNTV 635
Query: 709 AISQAGVKLTPELIATLTSLIPATKS------AEVAPGSSSAR----PL----------L 748
A SQAGV LTPELIATL SL+P T A+ A GSS+ + P+ +
Sbjct: 636 AGSQAGVALTPELIATLASLLPTTTQLPTTDGAKSAVGSSTMKLPFPPMTPNDGNQSHQI 695
Query: 749 AEPHVQSIEQLGNHYNPQAQSLTHHYASMSSTPSHSAQMLLGNNQLQESTASL-SQQGMV 807
A+ +QL N YN + Y +S+ + AQ + G++ +Q++ A++ QQG V
Sbjct: 696 ADQSTHPPQQLRNMYNVH-NAPYQPYPPLSAPAGNPAQ-VSGSSHIQDTAANMQQQQGAV 753
Query: 808 YSRPLPNFSIAPQAAPVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPN 867
SR +PNF + Q+ VAVSP Q YQ ++QKG+G++QGT+AS LY S FQQPN
Sbjct: 754 SSRHMPNFMMPTQSGQVAVSPHASQHYQVEVSPSNQKGFGVVQGTDASALYNSQAFQQPN 813
Query: 868 NPT----------AVSNQV---NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGT 914
N + A+SNQ N SQ Q M +VD+VN + PN QQL + G QG
Sbjct: 814 NNSQAFQQPNNSFALSNQTNSANASQQQTAMLYTVDQVNSDTPN--QQLP--MFGVSQGQ 869
Query: 915 SDGEVDKNQRYQSTLQFAANLLLQIQQQQQTNSPAGRGTG 954
++ E DKNQRYQSTLQFAANLLLQ QQQQ +P G G G
Sbjct: 870 TEVEADKNQRYQSTLQFAANLLLQ-LQQQQQQAPGGHGPG 908
>gi|224133226|ref|XP_002327991.1| predicted protein [Populus trichocarpa]
gi|222837400|gb|EEE75779.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/1014 (51%), Positives = 634/1014 (62%), Gaps = 137/1014 (13%)
Query: 1 MAPPPSKFNRA---------YDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT 51
MAPPP K N+A + E S+NLWVGN+S + D+DL ELF +FGALD VT
Sbjct: 1 MAPPPLKSNKAGTLKSETDQQNSAEVKESNNLWVGNISREVADSDLMELFAQFGALDSVT 60
Query: 52 TYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSK 111
TYS+RS+AFVYFK VEDAK AKDALQGS RGN IKIEFARPAKPSK+LWVGGIS +VS+
Sbjct: 61 TYSARSYAFVYFKHVEDAKQAKDALQGSSLRGNQIKIEFARPAKPSKYLWVGGISSSVSE 120
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
E LEE FLKFG IEDFKFL+D A+VEY +LEDA EA+KN+NG++IGG+Q+RVDFLRSQ
Sbjct: 121 ERLEEEFLKFGKIEDFKFLRDRKIAYVEYLKLEDAFEAMKNMNGKKIGGDQIRVDFLRSQ 180
Query: 172 PSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPS 231
+RREQ P+ D+R+ FS H +R S+G +DG PS ILWVGYPPS
Sbjct: 181 STRREQLPDFLDSRE-------DQFSATHYGVRRPQLPQSLGGRKDGQPSNILWVGYPPS 233
Query: 232 VQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIM 291
V++DEQMLHNAMILFGEIERIKS+PSR+YSFVEFRSVDEARRAKEGLQGRLFNDPRITIM
Sbjct: 234 VRIDEQMLHNAMILFGEIERIKSFPSRHYSFVEFRSVDEARRAKEGLQGRLFNDPRITIM 293
Query: 292 FSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADI 351
FSSS LAPGK+Y Y G KGPR EMF P +D++ +Q P NF P+ I
Sbjct: 294 FSSSGLAPGKEYSSFYPGVKGPRPEMFNEHPFTP--MDVMF-DQPGGPGNFGSPFPPSGI 350
Query: 352 RGPSMPMRSIGAHGGHETLLSGPDFKDF---HSMQDPNAKNLDPNWRRPSPSPGIRTSPT 408
P++P+R G G +TLL G +F D HS +DP + GI SP
Sbjct: 351 HRPNLPVRPFGPQGVFDTLLQGGEFNDLAPSHSTRDPAS--------------GILPSPA 396
Query: 409 QGIRQPLNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGL 468
GIR + WDV D +QF R++KR R+D + IDD +FP+RK+DD L
Sbjct: 397 SGIRPSMRSVSSGWDVLDPSQFPREAKRSRIDAAPSIDDDSFPARKMDDRDL-------- 448
Query: 469 GSITGGPASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARC 528
LSPV GG + D+DFIWRGI+AKGGTP+
Sbjct: 449 -------------------GLSPV------GGRFKGHFDNDFIWRGIVAKGGTPLRHMAG 483
Query: 529 VPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLG 588
+ ++ P V+NCSARTGLDMLAKHYAEAIGFDIVFFLPDSE+DFASYTEFLRYLG
Sbjct: 484 LACQISLKFTKPHVINCSARTGLDMLAKHYAEAIGFDIVFFLPDSEEDFASYTEFLRYLG 543
Query: 589 SKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQAMVPPQT------ 642
KNRAGVAKFDDGTTLFLVPPSDFL VLKV GPERLYGVVLKLPQQ VP T
Sbjct: 544 LKNRAGVAKFDDGTTLFLVPPSDFLKNVLKVAGPERLYGVVLKLPQQ--VPSNTSIQEQL 601
Query: 643 ---------VDKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPL 693
D Q IPPP A+Y R EE +P+ +NRF H+DSK+ K +P +E +
Sbjct: 602 PQPIHFSQYTDNQ-IPPPEADYNQLRQGEERGMPIHHNRFLHEDSKLPPKSFYPSTTESI 660
Query: 694 IAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSLIPATK------SAEVAPGSSSARPL 747
+Y N +A S AGV LTPELIATL + +P K S + A GSS RP
Sbjct: 661 AVPPVPQEYAPNLSAGPSTAGV-LTPELIATLATFLPTNKQSSSSESNQPALGSSIVRPQ 719
Query: 748 LAE------------PHVQSIE------QLGNHYNPQAQSLTHH--YASMSSTPSHSAQM 787
+ H + Q+GN +N Q Q + Y S+ +T SHSA +
Sbjct: 720 FSSVAPDRGISSQGWKHDNQVSGNASHLQMGNQFNSQVQVQSQFQPYPSVPNTYSHSATV 779
Query: 788 LLGNNQLQESTASLSQQGMVYSRPLPNFSIAPQAAPVAVSPPVHQQYQFAAPSNSQKGYG 847
+ N+Q+Q+STASLS Q + SRPL NFS+ Q+ A+SP V Q+ P +QKG+G
Sbjct: 780 VPSNSQIQDSTASLSHQSVTSSRPLTNFSMPSQSGQFALSPQVSQKNLLKVPHATQKGHG 839
Query: 848 MMQGTEASTLYGSSVFQQPNNPTAVSNQVNLSQPQNVMTVSVDKVNLEHPNHVQQLQSVL 907
++ GT+ N SQ Q+ + S D+ N E PN VQQ Q L
Sbjct: 840 VVHGTDVQG-------------------ANYSQTQSGIPPSADRGNWELPNQVQQFQPAL 880
Query: 908 SGAGQGTSDGEVDKNQRYQSTLQFAAN----LLLQIQQQQQTNSPAGRGTGNQQ 957
SG+GQGTS+ E DKNQRYQSTLQFAAN + Q QQQ+ +PA G+GNQQ
Sbjct: 881 SGSGQGTSEVEADKNQRYQSTLQFAANLLLQIQQQQQQQKTATNPAAHGSGNQQ 934
>gi|357473075|ref|XP_003606822.1| Flowering time control protein FPA [Medicago truncatula]
gi|355507877|gb|AES89019.1| Flowering time control protein FPA [Medicago truncatula]
Length = 973
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/994 (48%), Positives = 623/994 (62%), Gaps = 129/994 (12%)
Query: 12 YDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
Y + + PS+NL+V NLS D TD+DL +LF ++GALD VT+YS+R++AFV+FKR++DAKA
Sbjct: 18 YSEDSSTPSNNLYVANLSPDVTDSDLMDLFVQYGALDSVTSYSARNYAFVFFKRIDDAKA 77
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
AK+ALQG +FRGN ++IEFARPAK K LWVGGIS V+KE+LE F KFG +EDFKF +
Sbjct: 78 AKNALQGFNFRGNSLRIEFARPAKTCKQLWVGGISPAVTKEDLEADFRKFGKVEDFKFFR 137
Query: 132 DGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIG 191
D NTA VE+ L+DA +A+K +NG+ IGGE +RVDFLRS ++R+Q + G G
Sbjct: 138 DRNTACVEFFNLDDAIQAMKIMNGKHIGGENIRVDFLRSNYAKRDQGLDY-----GQFQG 192
Query: 192 RGTGFSDNHSAYKRS-HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIE 250
+ G SD++S +KR + Q + R DG P+ ILW+GYPP+VQ+DEQMLHNAMILFGEIE
Sbjct: 193 KSFGPSDSYSGHKRPLNSQPLMRRKGDGQPNNILWIGYPPNVQIDEQMLHNAMILFGEIE 252
Query: 251 RIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGT 310
RIKS PSRN+SFVEFRSVDEARRAKEGLQGRLFNDP ITI +S+++ GKDYPG Y G+
Sbjct: 253 RIKSVPSRNFSFVEFRSVDEARRAKEGLQGRLFNDPHITINYSNADQVQGKDYPGFYPGS 312
Query: 311 KGPRSEMFFGDQ-IRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHET 369
GPR ++F + RP+Q+D+ G N+ M PN+F G L GP++PMR G +GG E+
Sbjct: 313 NGPRPDLFLNEHPYRPAQMDLFGHNRPMIPNSFPGQLPSGGNVGPNIPMRPFGPNGGPES 372
Query: 370 LLSGPDFKDFHSMQDPNAKNLDPNWRRPS-PSPGIRTSPTQGIRQPLNHAPGSWDVYDAN 428
++SGP+F + ++ PNW+RPS P+ G+ +SP G R P + G+WDV D N
Sbjct: 373 VVSGPEFNENSTLHK------GPNWKRPSPPAQGLLSSPVPGARLPARSSSGAWDVLDIN 426
Query: 429 QFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNR 488
RDSKR R+DG++P DD GR
Sbjct: 427 HIPRDSKRSRIDGALPNDDP----------------------------------YAGRGI 452
Query: 489 LSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSAR 548
L ++++T G P D IWRG+IAKGGTPVCRARC+P GKGI +ELPEVV+CSAR
Sbjct: 453 LGSASTRITGGVHAVQP---DHIWRGLIAKGGTPVCRARCIPVGKGIGTELPEVVDCSAR 509
Query: 549 TGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVP 608
TGLD LA HYA+AI F+IVFFLPDSE+DF SYTEFLRYLG+KNRAGVAKF++ TTLFLVP
Sbjct: 510 TGLDTLAAHYADAIDFEIVFFLPDSENDFGSYTEFLRYLGAKNRAGVAKFEN-TTLFLVP 568
Query: 609 PSDFLSKVLKVVGPERLYGVVLKL-PQQAMVP---------PQTVDKQNIPPPHAEYGLT 658
PSDFL+ VLKV GPERLYGVVLK P Q+ VP P Q +PP AEY +
Sbjct: 569 PSDFLTDVLKVTGPERLYGVVLKFAPVQSGVPVHQSSHLPVPSNQYMQQMPPSQAEYDMN 628
Query: 659 RPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLT 718
KEE VL ++YNR H+DSK+ +K +P P ++ DY N AA+ SQAGV LT
Sbjct: 629 PAKEEQVLAMNYNRMLHEDSKLPAKQVYPPTGGPSSVQPAASDYALNTAASGSQAGVALT 688
Query: 719 PELIATLTSLI------PATKSAEVAPGSSSARP--------------------LLAEPH 752
PELIATL S + PA A+ GSS+ +P +A+
Sbjct: 689 PELIATLASFLPTNVQSPAIDGAKSGAGSSTVKPPFPPVAPNDGNQSQIWKQDHQIADQS 748
Query: 753 VQSIEQLGNHYNPQAQSLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPL 812
+ +Q N YN + + H +S P H+AQ G++ +Q++ + QQG+V SR +
Sbjct: 749 IHPSQQFRNMYN--SHNAHHQPYPPASAPGHTAQAFSGSSHIQDNAVNQQQQGVVSSRLV 806
Query: 813 PNFSIAPQAAPVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSV---------- 862
NF Q+ VA SP QYQ P N+QKG+ G++ S LY S
Sbjct: 807 SNFVTPTQSGQVAASPHFSHQYQAEVPPNTQKGF---PGSDVSVLYNSQAFQQPNNNHHP 863
Query: 863 --------------------FQQPNNPTAVSNQVNLSQPQN--VMTVSVDKVNLEHPNHV 900
FQQPNN A+S+QVN + PQ+ VM + D+VN P +
Sbjct: 864 FQQPNNNPQHFQQSNNNPQPFQQPNNSIALSSQVNSANPQHQPVMQYTADQVNSNPP--I 921
Query: 901 QQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAAN 934
QQ + G GQG + E DKNQRYQSTLQFAAN
Sbjct: 922 QQHPAF--GVGQGPPELEADKNQRYQSTLQFAAN 953
>gi|307136258|gb|ADN34086.1| RNA-binding protein [Cucumis melo subsp. melo]
Length = 916
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/920 (53%), Positives = 608/920 (66%), Gaps = 61/920 (6%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
AKP ++LWVGGIS VS+E+LEE F KFG I++FKFL+D NTAFVEY RLEDA++AL+ +
Sbjct: 1 AKPCRNLWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMM 60
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS-HPQSSV 212
NG++IGGEQLRVDFLRSQP RR+QWP++ D G + R G D S YKR H QSS
Sbjct: 61 NGKRIGGEQLRVDFLRSQPMRRDQWPDTRDGH-GQLQARNMGMGDFQSGYKRPLHAQSSE 119
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
R RDGPPSK+LW+GYPPSVQ+DEQMLHNAMILFGEIERI S+ +R+++FVEFRSVDEAR
Sbjct: 120 VR-RDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERITSFHTRHFAFVEFRSVDEAR 178
Query: 273 RAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGD-QIRPSQLDML 331
RAKEGLQGRLFNDPRITIMFS+S+ P K++PG Y G K R +MFF + QIRP +D+L
Sbjct: 179 RAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEARPDMFFNEHQIRPPPMDLL 238
Query: 332 GPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKDF---HSMQDPNAK 388
G M N F G L + I GP+ +R +F D HS QD N+K
Sbjct: 239 GHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGPP-EFNDLATSHSFQDANSK 297
Query: 389 NL-DPNWRRPSP-SPGIRTSPTQGIRQP--LNHAPGSWDVYDANQFQRDSKRLRVDGSMP 444
N+ PNWRR SP +PGI +SP GIR P + P SWDV D NQFQRDSKR R+DG
Sbjct: 298 NMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVLDVNQFQRDSKRSRIDGPPS 357
Query: 445 IDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGFGRN 504
+DD +FP RK+D+ + DQ YG+G I+ G +S + N + P+ + G G++
Sbjct: 358 LDDVSFPPRKMDNRSMGFDQQYGIGPISDGGSSVPYGNAPAKTPPIPIGVRAPVSGPGQS 417
Query: 505 PIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGF 564
++DFIWRGIIAKGGTPVC ARCVP G+GI SELPEVVNCSARTGLD L KHYAEA GF
Sbjct: 418 HAENDFIWRGIIAKGGTPVCHARCVPIGEGIGSELPEVVNCSARTGLDQLTKHYAEATGF 477
Query: 565 DIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPER 624
DIVFFLPDSEDDFASYTEFLRYLG+KNRAGVAKFDDGTT+FLVPPS+FL KVLKV GPER
Sbjct: 478 DIVFFLPDSEDDFASYTEFLRYLGAKNRAGVAKFDDGTTMFLVPPSEFLRKVLKVSGPER 537
Query: 625 LYGVVLKL---------PQQAMVPPQTVD---KQNIPPPHAEYGLTRPKEEHVLPVDYNR 672
LYG+VLK PQQ+ +P T D +Q++ P EYG PK+E + P+DYNR
Sbjct: 538 LYGLVLKFPQVSVSEAAPQQSYLPVPTSDYGERQHVLPSQTEYGSVPPKQEQLPPMDYNR 597
Query: 673 FSHDDSKVQSKMHFPHASEPLIAHSSSMDY-GSNNAAAISQAGVKLTPELIATLTSLIPA 731
HD+ K K+ +PL +Y G+NN AAISQAG+ LTPELIATL SL+P
Sbjct: 598 VLHDEIKEPPKLLPTSEPQPLAVQPLPQEYSGNNNTAAISQAGLALTPELIATLVSLLPG 657
Query: 732 ---TKSAEVA-------------------PGSSSARPLL----AEPHVQSIEQLGNHYNP 765
+ S E A G++S ++ ++P+ Q +Q+GNH+NP
Sbjct: 658 KTQSSSLESAKQPAVSPQPPVPIPPVVSNKGATSEGWMVGHQSSDPNGQPFQQMGNHFNP 717
Query: 766 QAQSLTHH--YASMSSTPSHSAQMLLGNNQLQESTASLSQQGMV--YSRPLPNFSIAPQA 821
Q Q+L+ Y + TP+ A +G +Q+Q++ SL QQ V RPL +S P+
Sbjct: 718 QGQNLSQFQPYPPLPQTPNQHAPQAIGTSQIQDAAVSLPQQQQVPIPYRPLSTYSAPPEN 777
Query: 822 APVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSN--QVNLS 879
A + + QYQ SQ+GYG + G + S YG V QQ N +SN Q + +
Sbjct: 778 AQASGLALANSQYQHDVSQMSQRGYGPVNGVDTSG-YGPPVMQQSTNTLTLSNQGQGSTA 836
Query: 880 QPQNVMTVSVDKVNLEHPNHVQQLQS--VLSGAGQGTSDGEVDKNQRYQSTLQFAANLLL 937
Q Q + ++ D+VN E P +Q LQS + +G G GTSD E K+QRY+STLQFAANLLL
Sbjct: 837 QSQPITQLASDRVNPELPYQMQHLQSANLGTGTGTGTSDVEAGKDQRYRSTLQFAANLLL 896
Query: 938 -QIQQQQQTNSPAGRGTGNQ 956
QQQQQ AG G+GNQ
Sbjct: 897 QIQQQQQQQQQQAGWGSGNQ 916
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 47/210 (22%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
A P NLWVG +S + L+E F KFG +D+ R+ AFV + R+EDA A +
Sbjct: 1 AKPCRNLWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMM 60
Query: 77 QGSDFRGNPIKIEFAR--PAK--------------------------------------- 95
G G ++++F R P +
Sbjct: 61 NGKRIGGEQLRVDFLRSQPMRRDQWPDTRDGHGQLQARNMGMGDFQSGYKRPLHAQSSEV 120
Query: 96 -----PSKHLWVG-GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEA 149
PSK LW+G S + ++ L + FG IE + AFVE+ +++A A
Sbjct: 121 RRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERITSFHTRHFAFVEFRSVDEARRA 180
Query: 150 LKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
+ + GR ++ + F S P ++ P
Sbjct: 181 KEGLQGRLFNDPRITIMFSNSDPGPVKEHP 210
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 15 KEAPPSSNLWVGNLSADTTDAD-LKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ PPS LW+G + D L FG ++++T++ +R FAFV F+ V++A+ AK
Sbjct: 122 RDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERITSFHTRHFAFVEFRSVDEARRAK 181
Query: 74 DALQGSDFRGNPIKIEFAR----PAKPSKHLWVGG 104
+ LQG F I I F+ P K + GG
Sbjct: 182 EGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGG 216
>gi|224093058|ref|XP_002309788.1| predicted protein [Populus trichocarpa]
gi|222852691|gb|EEE90238.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/967 (51%), Positives = 592/967 (61%), Gaps = 195/967 (20%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVGN+S D T++DL +LF ++G++D VTTY++RS+ FVYFKRVEDAK AKDALQG+
Sbjct: 6 SNNLWVGNISRDVTESDLMKLFAQYGSIDNVTTYTARSYGFVYFKRVEDAKQAKDALQGT 65
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
RGN I IEFARPAKPS+HLWVGGI +VS+E LEE FLKFG IEDFKF +D NTA+VE
Sbjct: 66 SLRGNQIIIEFARPAKPSRHLWVGGIGSSVSEEWLEEEFLKFGKIEDFKFRRDQNTAYVE 125
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDN 199
Y +LEDA++A+KN+NG++IGG+QLRVDFLR+Q SRR
Sbjct: 126 YFKLEDASQAMKNMNGKKIGGDQLRVDFLRTQSSRR------------------------ 161
Query: 200 HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRN 259
P+S G +DG PS ILW+GYPPSV++DEQM+HNAMILFGEIE+IKS+PSR+
Sbjct: 162 -------IPKSP-GERKDGQPSNILWIGYPPSVRIDEQMIHNAMILFGEIEKIKSFPSRH 213
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFF 319
YSFVEFRSVDEARRAKEGLQGRLF DPRITI FSSS LAPGK+ Y G +G R EMF
Sbjct: 214 YSFVEFRSVDEARRAKEGLQGRLFCDPRITITFSSSGLAPGKEDSAFYPGVEGRRLEMFN 273
Query: 320 GDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKDF 379
P +D++ +Q P NF G P+ G H D
Sbjct: 274 KHSFAP--MDIMF-DQPGGPRNFPGPFPPS------------GEHN---------DLAPS 309
Query: 380 HSMQDPNAKNLDPNWRRPSPSPGIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRLRV 439
HS +DP + GI SP GIR P+ WDV D +QF RD+KR R+
Sbjct: 310 HSDRDPAS--------------GILPSPASGIRPPMRSISSGWDVLDPSQFPRDAKRSRI 355
Query: 440 DGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAG 499
D + +DD +FP+RK+ D L LD++YGLG GA+ + QG N LSPV G
Sbjct: 356 DSAPSVDDDSFPARKMGDRDLGLDKAYGLG------PRGAYPSFQGNNSLSPV------G 403
Query: 500 GFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYA 559
G + D DFIWRGI+AKGG PVC ARCVP GKGIESE+P V+NCSARTGLD+LAKHYA
Sbjct: 404 GRLKGHFDDDFIWRGIVAKGGMPVCHARCVPVGKGIESEIPPVINCSARTGLDVLAKHYA 463
Query: 560 EAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKV 619
EAIGFDIVFFLPDSEDDFASYTEFL YLGSKNRAGVAKFDDGTTLFLVPPSDFL VLKV
Sbjct: 464 EAIGFDIVFFLPDSEDDFASYTEFLHYLGSKNRAGVAKFDDGTTLFLVPPSDFLKNVLKV 523
Query: 620 VGPERLYGVVLKLPQQAMVPPQTVDKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSK 679
GPERLYGVVLKLPQQA P +Q +P P
Sbjct: 524 AGPERLYGVVLKLPQQA--PNNKSMQQQLPQP---------------------------- 553
Query: 680 VQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSLIPATKSAEVAP 739
+HF H AA S AG LTP+LIATL++L+PA K +
Sbjct: 554 ----IHFSH-------------------AAPSSAGF-LTPDLIATLSTLLPANKQSS--- 586
Query: 740 GSSSARPLLAEPHVQ---------------------------SIEQLGNH--YNPQAQSL 770
S S +P L P V+ S Q GNH Y Q QS
Sbjct: 587 -SESNQPELGSPIVRPPFSSVIPDKGTSSQGWKHDNQVSGNTSHLQFGNHLNYQLQVQSQ 645
Query: 771 THHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSIAPQAAPVAVSPPV 830
S+ ST SHS ++ N+Q+Q+ST SLS Q SRPL +FS+ Q+ A+SP V
Sbjct: 646 FQPSPSVPSTYSHSTNVVPRNSQIQDSTVSLSHQSATPSRPLTSFSMPSQSGQFALSPQV 705
Query: 831 HQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQVNLSQPQNVMTVSVD 890
QQ F P ++QKGYG++QGT N SQ Q+ + S D
Sbjct: 706 SQQNLFEVPHSTQKGYGVVQGT------------------------NFSQTQSGIPPSAD 741
Query: 891 KVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLLLQIQQQQQTNSPAG 950
+ N E P+ VQQ Q LS +G+G S E DKNQRYQSTLQFAANLLLQ+QQQQ T++P
Sbjct: 742 RGNGELPSQVQQFQPALSVSGRGIS--EADKNQRYQSTLQFAANLLLQLQQQQNTSNPDA 799
Query: 951 RGTGNQQ 957
G+GNQQ
Sbjct: 800 HGSGNQQ 806
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ A PS +LWVG + + ++ L+E F KFG ++ ++ A+V + ++EDA A
Sbjct: 78 RPAKPSRHLWVGGIGSSVSEEWLEEEFLKFGKIEDFKFRRDQNTAYVEYFKLEDASQAMK 137
Query: 75 ALQGSDFRGNPIKIEFARP---------------AKPSKHLWVG-GISQTVSKEELEEGF 118
+ G G+ ++++F R +PS LW+G S + ++ +
Sbjct: 138 NMNGKKIGGDQLRVDFLRTQSSRRIPKSPGERKDGQPSNILWIGYPPSVRIDEQMIHNAM 197
Query: 119 LKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ FG IE K + +FVE+ +++A A + + GR ++ + F
Sbjct: 198 ILFGEIEKIKSFPSRHYSFVEFRSVDEARRAKEGLQGRLFCDPRITITF 246
>gi|359478105|ref|XP_002269583.2| PREDICTED: flowering time control protein FPA-like [Vitis vinifera]
Length = 878
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/1003 (48%), Positives = 605/1003 (60%), Gaps = 171/1003 (17%)
Query: 1 MAPPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAF 60
MAP R ++ E P S LWVGN+ T++DL +F +FGALD +YSSRSFAF
Sbjct: 1 MAP---LIRRDAENSEVHPFS-LWVGNVGNSVTESDLLAVFSRFGALDCFISYSSRSFAF 56
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLK 120
VYF+R EDA+AA++ALQG G P+KIEFARPAKP K LWVGG S + +K ELE FLK
Sbjct: 57 VYFRRGEDARAAREALQGMVVLGTPMKIEFARPAKPCKSLWVGGFSPSTTKGELENEFLK 116
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
FG IEDFKF D N+A VEY +LEDA++ALK +NG+QIGG +RVDFLR Q SRR
Sbjct: 117 FGKIEDFKFFWDRNSALVEYVKLEDASQALKGLNGKQIGGAMIRVDFLRLQTSRR----- 171
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSS---VGRNRDGPPSKILWVGYPPSVQMDEQ 237
F+ + PQSS V R +G PS +LWVGYPPS+Q++EQ
Sbjct: 172 ---------------FNLYSIFFLLCLPQSSQSSVIRKGEGQPSNVLWVGYPPSIQLEEQ 216
Query: 238 MLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
ML+NAMILFGEIERIKS+PSR+YSFVEFRS+DEARRAKEGLQGRLFNDPRI+IM+SSS +
Sbjct: 217 MLYNAMILFGEIERIKSFPSRHYSFVEFRSIDEARRAKEGLQGRLFNDPRISIMYSSSGV 276
Query: 298 APGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMP 357
PGK+Y G R + F +++ +D+ PN
Sbjct: 277 VPGKEY---NPGIPESRPDTFV-NELPFRHVDVFSPN----------------------- 309
Query: 358 MRSIGAHGGHETLLSGPDFKDFHSM---QDPNAKNL-DPNWRRPSPSP-GIRTSPTQGIR 412
G HE SGP + ++ QD + NL PNWRRPSPS G+ SP IR
Sbjct: 310 -------GSHEPPRSGPGLNELAALRNFQDTSPNNLMGPNWRRPSPSTLGMLPSPVPSIR 362
Query: 413 QPLNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSIT 472
+ +WDV DANQFQRDSKR RVDG++ I + +FP RK DD GL G
Sbjct: 363 PSVRPVSAAWDVSDANQFQRDSKRSRVDGAVSISNPSFPLRKSDDLGLAAQSHSG----- 417
Query: 473 GGPASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFG 532
+D+IWRGIIAKGG VC ARCV
Sbjct: 418 -----------------------------------TDYIWRGIIAKGGATVCHARCVAIE 442
Query: 533 KGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNR 592
KG+ S+LPE+VNCSARTGLD+L KHYAEA+GF++VFFLPDSEDDFASYTEFL YLGSK+R
Sbjct: 443 KGLSSKLPEIVNCSARTGLDLLTKHYAEAVGFEVVFFLPDSEDDFASYTEFLCYLGSKDR 502
Query: 593 AGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQA------------MVP- 639
AGVAK DDGTTLFLVPPSDFLSKVLKV GPERLYGVVLKL QQ VP
Sbjct: 503 AGVAKLDDGTTLFLVPPSDFLSKVLKVSGPERLYGVVLKLAQQVPSAASMQQQSHRPVPS 562
Query: 640 PQTVDKQNIPPPHAEYGLTRPKEEHVLPVDYN-RFSHDDSKVQSKMHFPHASEPLIAHSS 698
Q D+Q I PPH EY L P++E VL +D+N H+DS + K+ P SE L S
Sbjct: 563 SQYSDRQQI-PPHVEYSLI-PQKERVLHMDHNSSILHEDSSLSPKLRLPSTSESLATQSI 620
Query: 699 SMDYGSNNAAAISQAGVKLTPELIATLTSLIP------ATKSAEVAPGSSSARPLL---A 749
S D S+N A +SQAG+ LTPELIA L SL+P A+ SA + GSS ARP L
Sbjct: 621 SQDRASSNTAVVSQAGLTLTPELIAHLASLLPGGMQSSASVSAPQSLGSSIARPSLPPSV 680
Query: 750 EPHVQSI-------------EQLGNHYNPQAQSLT--HHYASMSSTPSHSAQMLLGNNQL 794
P ++ +Q GN ++PQAQ L +Y +++ TP H+A + + + Q+
Sbjct: 681 APDRGTLSQGRNQDHQTPPSQQSGNQFHPQAQPLPQFQNYPTVTQTPGHTA-LAVPDGQI 739
Query: 795 QESTASLSQQGMVYSRPLPNFSIAPQAAPVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEA 854
Q++T +L Q G + SRPL N + Q+ AVSP V+QQYQ NSQ YGM +
Sbjct: 740 QDNTFNLPQLGTISSRPLTNLPVPSQSGQFAVSPQVNQQYQLEIHQNSQNAYGMGRA--- 796
Query: 855 STLYGSSVFQQPNNPTAVSNQVNLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGT 914
+ PT S+QV+ + ++VN PN VQQLQS+++GAGQ
Sbjct: 797 ------------DGPTTFSSQVDGAS---------NRVNPALPNQVQQLQSMINGAGQWL 835
Query: 915 SDGEVDKNQRYQSTLQFAANLLLQIQQQQQTNSPAGRGTGNQQ 957
SD + DK+QRYQST+QFAA+LL QI++QQQ + A + G QQ
Sbjct: 836 SDDDADKSQRYQSTIQFAADLLEQIRKQQQQTNQAEQWPGKQQ 878
>gi|297828039|ref|XP_002881902.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
gi|297327741|gb|EFH58161.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
Length = 902
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/994 (47%), Positives = 590/994 (59%), Gaps = 170/994 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVG+L+ +TT++DL ELFG++G +D++T YSSR FAF+Y++RVE+A AAK+ALQG+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRRVEEAVAAKEALQGA 76
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+ G+ IKIE+ARPAKP K LWVGGI +VSK++LEE F KFG IEDF+FL++ TAF++
Sbjct: 77 NLNGSQIKIEYARPAKPCKSLWVGGIGPSVSKDDLEEEFSKFGKIEDFRFLRERKTAFID 136
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDN 199
Y ++DA +A K++NG+++GG LRVDFLRSQ R+EQW S+D R+G + N
Sbjct: 137 YYEMDDALQA-KSMNGKRMGGSFLRVDFLRSQAPRKEQWAGSYDNRNGNM---------N 186
Query: 200 HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQM--DEQMLHNAMILFGEIERIKSYPS 257
H K HP S D PSK+LW+GYPP+ DEQMLHNAMIL+GEIERIK YPS
Sbjct: 187 H---KPQHPHSYDDGKGDVQPSKVLWIGYPPNATQCNDEQMLHNAMILYGEIERIKCYPS 243
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEM 317
++S VEFRS +EAR AKEG+QGRLFN+PRI IM+S+ EL P D YSG K R++M
Sbjct: 244 SHFSLVEFRSAEEARHAKEGIQGRLFNNPRIKIMYSNDELPPEPDDTSFYSGMKRSRTDM 303
Query: 318 FFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFK 377
F D PS F I G P+R G +E +G ++
Sbjct: 304 FNND---PS---------------FISSPHSTGIPGSMRPLR-----GSNERSYNGSEYN 340
Query: 378 DFHSMQDPNAKNLDPNWRRPS-------PS---PGIRTSPTQGIRQPLNHAPGSWDVYDA 427
D +PNWRRPS PS PGI SP QG+R P+ PGSW+ YD
Sbjct: 341 D--------VVGKEPNWRRPSANGTGILPSPTGPGILPSPAQGMRHPMRSNPGSWEEYDP 392
Query: 428 NQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRN 487
Q R+SKR R DGS+ F +D ++S+G S+ P
Sbjct: 393 AQLDRESKRTRRDGSV----DGFTPMGVD------ERSFGRVSVAARPI----------- 431
Query: 488 RLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSA 547
R P DSD+IWRG+IAKGGTPVC ARCVP KGIE++LPEVVNCSA
Sbjct: 432 ---------------RGPPDSDYIWRGMIAKGGTPVCCARCVPMVKGIETKLPEVVNCSA 476
Query: 548 RTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLV 607
RTGL+MLAKHY +AIGF+IVFFLPD ++DFASYTEFLRYL SK+RAGVAK DDGTTLFLV
Sbjct: 477 RTGLNMLAKHYTDAIGFEIVFFLPDRQEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLV 536
Query: 608 PPSDFLSKVLKVVGPERLYGVVLKLPQQAMV------------PPQTVDKQNIPPPHAEY 655
PPSDFL+ VLKV GPERLYGVVLKLP A+ P +D+ P +A +
Sbjct: 537 PPSDFLTDVLKVSGPERLYGVVLKLPPPAVPVTASYIQESQSNPLHYMDQARDSPANASH 596
Query: 656 GLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGV 715
L P+E +YNR + + SK P SEPL NNAA QAGV
Sbjct: 597 SLYPPRE------NYNRVALEHLTAASK---PSVSEPLRI--------PNNAAP--QAGV 637
Query: 716 KLTPELIATLTSLIPATKSAEVAP------------------------GSSSARPLLAEP 751
LTPEL+ATL S++PAT S AP G + ++ P
Sbjct: 638 SLTPELLATLASILPAT-SQPAAPESHQPISGPSTVVSTVPQSNGLYNGEAPSQAWKRGP 696
Query: 752 HV------QSIEQLGNHYNPQAQ--SLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQ 803
QS +Q GN Y P Q Y S+ P++S+ M+ GN Q Q + ++ Q
Sbjct: 697 QTVHDATNQSFQQYGNQYTPAGQLPPPPARYPPASNNPNYSSGMVHGNMQYQGQSVNIPQ 756
Query: 804 QGMVYSRPLPNFSIAPQAAPV-AVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSV 862
+ + P N+S+ Q + VS P+ QQYQ A S + YG + + + +G +
Sbjct: 757 LSPLPNMPHNNYSMYTQGSTNHPVSQPMTQQYQPEA-SVPNQNYGPIPSYQQANYHGVTT 815
Query: 863 FQQPNNPTAVSNQVNLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTS-DGEVDK 921
Q N +N SQ Q VM VDK NLE N QLQ ++SGAGQGT+ DGEVDK
Sbjct: 816 NQAHN--------LNPSQFQAVMQPPVDKANLEPQNQAPQLQPMISGAGQGTTDDGEVDK 867
Query: 922 NQRYQSTLQFAANLLLQIQQQQQTNS---PAGRG 952
NQRYQSTLQFAANLLLQIQQ+QQ S PAG+G
Sbjct: 868 NQRYQSTLQFAANLLLQIQQKQQQQSSGTPAGQG 901
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 39/191 (20%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ A P +LWVG + + DL+E F KFG ++ R AF+ + ++DA AK
Sbjct: 89 RPAKPCKSLWVGGIGPSVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK- 147
Query: 75 ALQGSDFRGNPIKIEFARP-----------------------------------AKPSKH 99
++ G G+ ++++F R +PSK
Sbjct: 148 SMNGKRMGGSFLRVDFLRSQAPRKEQWAGSYDNRNGNMNHKPQHPHSYDDGKGDVQPSKV 207
Query: 100 LWVG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
LW+G +Q ++ L + +G IE K + + VE+ E+A A + I GR
Sbjct: 208 LWIGYPPNATQCNDEQMLHNAMILYGEIERIKCYPSSHFSLVEFRSAEEARHAKEGIQGR 267
Query: 157 QIGGEQLRVDF 167
++++ +
Sbjct: 268 LFNNPRIKIMY 278
>gi|297820786|ref|XP_002878276.1| hypothetical protein ARALYDRAFT_907458 [Arabidopsis lyrata subsp.
lyrata]
gi|297324114|gb|EFH54535.1| hypothetical protein ARALYDRAFT_907458 [Arabidopsis lyrata subsp.
lyrata]
Length = 906
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/966 (46%), Positives = 568/966 (58%), Gaps = 147/966 (15%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVG+L+ DTT++D+ +LFG+FG +D++T +SSRSFAF+Y++RVE+A AAK+ALQG+
Sbjct: 16 SNNLWVGSLTTDTTESDIADLFGRFGEIDRITAFSSRSFAFIYYRRVEEAVAAKEALQGA 75
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
D G+ IKIEFARPAKP K LWVGGIS +VSK++LE F FG IEDF+FL++ TAF++
Sbjct: 76 DLNGSLIKIEFARPAKPCKSLWVGGISPSVSKDDLEAKFRNFGKIEDFRFLRERKTAFID 135
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDN 199
+ +EDA EA KN+NG+++G LRVDFLRSQ ++E WP S+D RDG +
Sbjct: 136 FYNMEDAIEA-KNMNGKRMGNSYLRVDFLRSQGPQKEPWPGSNDGRDGSL---------- 184
Query: 200 HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRN 259
+ K+ +P S + PS +L +GYPPSVQ+DEQ LHN MILFGEIER SYPSR+
Sbjct: 185 --STKQQYPHSFGDAEGERRPSNVLRIGYPPSVQIDEQTLHNCMILFGEIERCISYPSRH 242
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK-DYPGSYSGTKGPRSEMF 318
+S VEFRS++EAR AKEGL GRL NDPRITIM+S+ ++ PG+ D YSG K R EMF
Sbjct: 243 FSLVEFRSIEEARCAKEGLHGRLLNDPRITIMYSNDDIPPGRGDDTSFYSGAKRSRPEMF 302
Query: 319 FGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKD 378
D S S + F G ++P G E SGP++ D
Sbjct: 303 VNDPPFIS---------SPHSSGFFGSMRPF--------------RGSVERSHSGPEYSD 339
Query: 379 FHSMQDPNAKNLDPNWRRPSPSP----GIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDS 434
++ +W RPSP+ GI S P+ GSW+ YD Q R+
Sbjct: 340 VVGTEE--------SWGRPSPTEAGKSGILPSLAPHTMLPVRSNRGSWEGYDPAQLDREP 391
Query: 435 KRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVAS 494
KR R DGS+ FPS +DD D++YG S+
Sbjct: 392 KRTRRDGSV----DGFPSMSVDDRVTGFDRTYGCASV----------------------- 424
Query: 495 KVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDML 554
A GR D DFIWRGIIAKGGT +CRARCVPFGKG E+ELPE+VNCSARTGLDML
Sbjct: 425 ---AARSGRGFPDPDFIWRGIIAKGGTTICRARCVPFGKGTETELPEIVNCSARTGLDML 481
Query: 555 AKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLS 614
AKHY EAIGF+IVFFLPD EDDFASYTEFL YLGSKNRAGVAK DDGTTLFLVPPSDFL+
Sbjct: 482 AKHYTEAIGFEIVFFLPDREDDFASYTEFLCYLGSKNRAGVAKLDDGTTLFLVPPSDFLT 541
Query: 615 KVLKVVGPERLYGVVLKLPQQAMVPPQTVDKQN---IP----------PPHAEYGLTRPK 661
VLKV GPERLYGVVLKLP VP KQ IP P +A GL +
Sbjct: 542 DVLKVSGPERLYGVVLKLP-PPQVPAAASYKQEPYPIPQSYMGQSRSLPANANNGLFAAR 600
Query: 662 EEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLTPEL 721
E+ + +YNR +SK K SE + +++M QAGV LTPEL
Sbjct: 601 EDRAV-FEYNRGMQKESKPSPKSLLGPLSESVSVPNTAM----------PQAGVSLTPEL 649
Query: 722 IATLTSLIPATK-------------SAEVAPGSSSAR--PLLAEPHVQSIEQLGNHYNPQ 766
+A L SL+P T S+ AP + R +++P S +QLGN YNP
Sbjct: 650 LAALASLLPTTSQPTASESHQSVGLSSGEAPSQAWNRDQSTVSDPSNLSFQQLGNQYNPM 709
Query: 767 AQ--------SLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSIA 818
Q Y +SSTPS+S+ M+ G Q Q S QQ + + P N+++
Sbjct: 710 GQLPPPPPLPPPPMRYPPVSSTPSYSSGMVHGGMQYQAPFVSTPQQAPLPTPPSSNYAMY 769
Query: 819 PQAAPVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQVNL 878
Q + AVS P+ QQYQ AP +Q Y + G E L+G +QQ N +NQ +
Sbjct: 770 SQGSHQAVSQPLRQQYQPEAPMLNQN-YIPVPGAENPVLHG---YQQGNYHCLTNNQAHK 825
Query: 879 SQPQNVMTVSVDKVNLEHPNHVQQLQ----------SVLSGAGQGTSDGEVDKNQRYQST 928
+ P S ++ + P ++++L +L GAGQGTSDGEVDKNQRYQST
Sbjct: 826 ANP------SQSQIAMPPPANMKKLDPSSQAQQQLQPLLLGAGQGTSDGEVDKNQRYQST 879
Query: 929 LQFAAN 934
LQFAAN
Sbjct: 880 LQFAAN 885
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 37/189 (19%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ A P +LWVG +S + DL+ F FG ++ R AF+ F +EDA AK+
Sbjct: 88 RPAKPCKSLWVGGISPSVSKDDLEAKFRNFGKIEDFRFLRERKTAFIDFYNMEDAIEAKN 147
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGG------------------------------ 104
+ G + ++++F R P K W G
Sbjct: 148 -MNGKRMGNSYLRVDFLRSQGPQKEPWPGSNDGRDGSLSTKQQYPHSFGDAEGERRPSNV 206
Query: 105 ------ISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQI 158
S + ++ L + FG IE + + VE+ +E+A A + ++GR +
Sbjct: 207 LRIGYPPSVQIDEQTLHNCMILFGEIERCISYPSRHFSLVEFRSIEEARCAKEGLHGRLL 266
Query: 159 GGEQLRVDF 167
++ + +
Sbjct: 267 NDPRITIMY 275
>gi|20453185|gb|AAM19833.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
gi|27764946|gb|AAO23594.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
Length = 901
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/993 (45%), Positives = 583/993 (58%), Gaps = 169/993 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVG+L+ +TT++DL ELFG++G +D++T YSSR FAF+Y++ VE+A AAK+ALQG+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+ G+ IKIE+ARPAKP K LWVGGI VSK++LEE F KFG IEDF+FL++ TAF++
Sbjct: 77 NLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFID 136
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDN 199
Y ++DA +A K++NG+ +GG LRVDFLRSQ ++EQW S+D R+G + N
Sbjct: 137 YYEMDDALQA-KSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNM---------N 186
Query: 200 HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQM--DEQMLHNAMILFGEIERIKSYPS 257
H K +P S D PSK+LW+G+PP+ DEQ+LHNAMILFGEIER+KSYPS
Sbjct: 187 H---KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPS 243
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEM 317
RN++ VEFRS +EAR+ KEGLQGRLFN+PRI IM+S+ EL P +D YSG K R++M
Sbjct: 244 RNFALVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSGMKRSRTDM 303
Query: 318 FFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFK 377
F D PS F I G P+R G +E +G ++
Sbjct: 304 FNND---PS---------------FVSSPHSTGIPGSMRPLR-----GTNERSYNGAEYN 340
Query: 378 DFHSMQDPNAKNLDPNWRRPS-------PSP---GIRTSPTQGIRQPLNHAPGSWDVYDA 427
D +PNWRRPS PSP GI SP QG R+P+ P SW+ YD
Sbjct: 341 D--------VVGKEPNWRRPSANGTGILPSPTGPGILPSPAQGTRRPMRSNPDSWEGYDP 392
Query: 428 NQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRN 487
Q R+SKR R DGS+ F +D+ +S+G GS+ P
Sbjct: 393 AQLVRESKRTRRDGSV----DGFTPMGVDE------RSFGRGSVAARPI----------- 431
Query: 488 RLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSA 547
R P DSD IWRG+IAKGGTPVC ARCVP GKGIE++LPEVVNCSA
Sbjct: 432 ---------------RGPPDSDHIWRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSA 476
Query: 548 RTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLV 607
RT L+MLAKHYA AIG +IVFF+PD E+DFASYTEFLRYL SK+RAGVAK DDGTTLFLV
Sbjct: 477 RTDLNMLAKHYAVAIGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLV 536
Query: 608 PPSDFLSKVLKVVGPERLYGVVLKLPQQAMV------------PPQTVDKQNIPPPHAEY 655
PPSDFL+ VL+V ERLYGVVLKLP A+ P +D+ P +A +
Sbjct: 537 PPSDFLTDVLQVTRQERLYGVVLKLPPPAVPVTASYRQESQSNPLHYMDQARDSPANASH 596
Query: 656 GLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGV 715
L P+E ++ R + + SK P SEPL NNAA QAGV
Sbjct: 597 SLYPPRENYI------RGAPEHLTAASK---PSVSEPLRI--------PNNAAP--QAGV 637
Query: 716 KLTPELIATLTSLIPATKSAEVAPGS----SSARPLLAEPHV------------------ 753
LTPEL+ATL S++PAT S AP S S +++ H
Sbjct: 638 SLTPELLATLASILPAT-SQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAPSQAWKRGP 696
Query: 754 --------QSIEQLGNHYNPQAQ--SLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQ 803
QS +Q GN Y P Q Y S+ P++++ M+ GN Q Q + ++ Q
Sbjct: 697 QTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQSQSVNMPQ 756
Query: 804 QGMVYSRPLPNFSIAPQAAPV-AVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSV 862
+ + P N+S+ Q + VS P+ QQYQ A S + YG + + + +G +
Sbjct: 757 LSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEA-SMPNQNYGPIPSYQQANFHGVTT 815
Query: 863 FQQPNNPTAVSNQVNLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKN 922
Q N +N SQ Q M DK NLE N +LQ ++SG GQGT+DGEVDKN
Sbjct: 816 NQAQN--------LNPSQFQAAMQPPADKANLEPQNQALRLQPMISGDGQGTTDGEVDKN 867
Query: 923 QRYQSTLQFAANLLLQIQQQQQTNS---PAGRG 952
QRYQSTLQFAANLLLQIQQ++Q S PAG+G
Sbjct: 868 QRYQSTLQFAANLLLQIQQKRQQQSSGTPAGQG 900
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ A P +LWVG + + + DL+E F KFG ++ R AF+ + ++DA AK
Sbjct: 89 RPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK- 147
Query: 75 ALQGSDFRGNPIKIEFAR---PAK--------------------------------PSKH 99
++ G G+ ++++F R P K PSK
Sbjct: 148 SMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKPQYPHSYEDFKGDVQPSKV 207
Query: 100 LWVG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
LW+G +Q ++ L + FG IE K N A VE+ E+A + + + GR
Sbjct: 208 LWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEARQCKEGLQGR 267
Query: 157 QIGGEQLRVDF 167
++++ +
Sbjct: 268 LFNNPRIKIMY 278
>gi|145331109|ref|NP_001078046.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331111|ref|NP_001078047.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331113|ref|NP_001078048.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|290463421|sp|Q8LPQ9.2|FPA_ARATH RecName: Full=Flowering time control protein FPA
gi|330255169|gb|AEC10263.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255170|gb|AEC10264.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255171|gb|AEC10265.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 901
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/993 (45%), Positives = 583/993 (58%), Gaps = 169/993 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVG+L+ +TT++DL ELFG++G +D++T YSSR FAF+Y++ VE+A AAK+ALQG+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+ G+ IKIE+ARPAKP K LWVGGI VSK++LEE F KFG IEDF+FL++ TAF++
Sbjct: 77 NLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFID 136
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDN 199
Y ++DA +A K++NG+ +GG LRVDFLRSQ ++EQW S+D R+G + N
Sbjct: 137 YYEMDDALQA-KSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNM---------N 186
Query: 200 HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQM--DEQMLHNAMILFGEIERIKSYPS 257
H K +P S D PSK+LW+G+PP+ DEQ+LHNAMILFGEIER+KSYPS
Sbjct: 187 H---KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPS 243
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEM 317
RN++ VEFRS +EAR+ KEGLQGRLFN+PRI IM+S+ EL P +D YSG K R++M
Sbjct: 244 RNFALVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSGMKRSRTDM 303
Query: 318 FFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFK 377
F D PS F I G P+R G +E +G ++
Sbjct: 304 FNND---PS---------------FVSSPHSTGIPGSMRPLR-----GTNERSYNGAEYN 340
Query: 378 DFHSMQDPNAKNLDPNWRRPS-------PSP---GIRTSPTQGIRQPLNHAPGSWDVYDA 427
D +PNWRRPS PSP GI SP QG R+P+ P SW+ YD
Sbjct: 341 D--------VVGKEPNWRRPSANGTGILPSPTGPGILPSPAQGTRRPMRSNPDSWEGYDP 392
Query: 428 NQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRN 487
Q R+SKR R DGS+ F +D+ +S+G GS+ P
Sbjct: 393 AQLVRESKRTRRDGSV----DGFTPMGVDE------RSFGRGSVAARPI----------- 431
Query: 488 RLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSA 547
R P DSD IWRG+IAKGGTPVC ARCVP GKGIE++LPEVVNCSA
Sbjct: 432 ---------------RGPPDSDHIWRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSA 476
Query: 548 RTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLV 607
RT L+MLAKHYA AIG +IVFF+PD E+DFASYTEFLRYL SK+RAGVAK DDGTTLFLV
Sbjct: 477 RTDLNMLAKHYAVAIGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLV 536
Query: 608 PPSDFLSKVLKVVGPERLYGVVLKLPQQAMV------------PPQTVDKQNIPPPHAEY 655
PPSDFL+ VL+V ERLYGVVLKLP A+ P +D+ P +A +
Sbjct: 537 PPSDFLTDVLQVTRQERLYGVVLKLPPPAVPVTASYRQESQSNPLHYMDQARDSPANASH 596
Query: 656 GLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGV 715
L P+E ++ R + + SK P SEPL NNAA QAGV
Sbjct: 597 SLYPPRENYI------RGAPEHLTAASK---PSVSEPLRI--------PNNAAP--QAGV 637
Query: 716 KLTPELIATLTSLIPATKSAEVAPGS----SSARPLLAEPHV------------------ 753
LTPEL+ATL S++PAT S AP S S +++ H
Sbjct: 638 SLTPELLATLASILPAT-SQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAPSQAWKRGP 696
Query: 754 --------QSIEQLGNHYNPQAQ--SLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQ 803
QS +Q GN Y P Q Y S+ P++++ M+ GN Q Q + ++ Q
Sbjct: 697 QTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQSQSVNMPQ 756
Query: 804 QGMVYSRPLPNFSIAPQAAPV-AVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSV 862
+ + P N+S+ Q + VS P+ QQYQ A S + YG + + + +G +
Sbjct: 757 LSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEA-SMPNQNYGPIPSYQQANFHGVTT 815
Query: 863 FQQPNNPTAVSNQVNLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKN 922
Q N +N SQ Q M DK NLE N +LQ ++SG GQGT+DGEVDKN
Sbjct: 816 NQAQN--------LNPSQFQAAMQPPADKANLEPQNQALRLQPMISGDGQGTTDGEVDKN 867
Query: 923 QRYQSTLQFAANLLLQIQQQQQTNS---PAGRG 952
QRYQSTLQFAANLLLQIQQ+QQ S PAG+G
Sbjct: 868 QRYQSTLQFAANLLLQIQQKQQQQSSGTPAGQG 900
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ A P +LWVG + + + DL+E F KFG ++ R AF+ + ++DA AK
Sbjct: 89 RPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK- 147
Query: 75 ALQGSDFRGNPIKIEFAR---PAK--------------------------------PSKH 99
++ G G+ ++++F R P K PSK
Sbjct: 148 SMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKPQYPHSYEDFKGDVQPSKV 207
Query: 100 LWVG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
LW+G +Q ++ L + FG IE K N A VE+ E+A + + + GR
Sbjct: 208 LWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEARQCKEGLQGR 267
Query: 157 QIGGEQLRVDF 167
++++ +
Sbjct: 268 LFNNPRIKIMY 278
>gi|222423512|dbj|BAH19726.1| AT2G43410 [Arabidopsis thaliana]
Length = 901
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/993 (45%), Positives = 580/993 (58%), Gaps = 169/993 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVG+L+ +TT++DL ELFG++G +D++T YSSR FAF+Y++ VE+A AAK+ALQG+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+ G+ IKIE+ARPAKP K LWVGGI VSK+ LEE F KFG IEDF+FL++ TAF++
Sbjct: 77 NLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDGLEEEFSKFGKIEDFRFLRERKTAFID 136
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDN 199
Y ++DA +A K++NG+ +GG LRVDFLRSQ ++EQW S+D R+G + N
Sbjct: 137 YYEMDDALQA-KSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNM---------N 186
Query: 200 HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQM--DEQMLHNAMILFGEIERIKSYPS 257
H K +P S D PSK+LW+G+PP+ DEQ+LHNAMILFGEIER+KSYPS
Sbjct: 187 H---KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPS 243
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEM 317
RN++ VEFRS +EAR+ KEGLQGRLFN+PRI IM+S+ L P +D YSG K R++M
Sbjct: 244 RNFALVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDGLPPEQDDTSFYSGMKRSRTDM 303
Query: 318 FFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFK 377
F D PS F I G P+R G +E +G ++
Sbjct: 304 FNND---PS---------------FVSSPHSTGIPGSMRPLR-----GTNERSYNGAEYN 340
Query: 378 DFHSMQDPNAKNLDPNWRRPS-------PSP---GIRTSPTQGIRQPLNHAPGSWDVYDA 427
D +PNWRRPS PSP GI SP QG R+P+ P SW+ YD
Sbjct: 341 D--------VVGKEPNWRRPSANGTGILPSPTGPGILPSPAQGTRRPMRSNPDSWEGYDP 392
Query: 428 NQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRN 487
Q R+SKR R DGS+ F +D+ +S+G GS+ P
Sbjct: 393 AQLVRESKRTRRDGSV----DGFTPMGVDE------RSFGRGSVAARPI----------- 431
Query: 488 RLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSA 547
R P DSD IWRG+IAKGGTPVC ARCVP GKGIE++LPEVVNCSA
Sbjct: 432 ---------------RGPPDSDHIWRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSA 476
Query: 548 RTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLV 607
RT L+MLAKHYA AIG IVFF+PD E+DFASYTEFLRYL SK+RAGVAK DDGTTLFLV
Sbjct: 477 RTDLNMLAKHYAVAIGCGIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLV 536
Query: 608 PPSDFLSKVLKVVGPERLYGVVLKLPQQAMV------------PPQTVDKQNIPPPHAEY 655
PPSDFL+ VL+V ERLYGVVLKLP A+ P +D+ P +A +
Sbjct: 537 PPSDFLTDVLQVTRQERLYGVVLKLPPPAVPVTASYRQESQSNPLHYMDQARDSPANASH 596
Query: 656 GLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGV 715
L P+E ++ R + + SK P SEPL NNAA QAGV
Sbjct: 597 SLYPPRENYI------RGAPEHLTAASK---PSVSEPLRI--------PNNAAP--QAGV 637
Query: 716 KLTPELIATLTSLIPATKSAEVAPGS----SSARPLLAEPHV------------------ 753
LTPEL+ATL S++PAT S AP S S +++ H
Sbjct: 638 SLTPELLATLASILPAT-SQPAAPESPQPMSGPSTVVSTAHQSNGLYNGEVPSQAWKRGP 696
Query: 754 --------QSIEQLGNHYNPQAQ--SLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQ 803
QS +Q GN Y P Q Y S+ P++++ M+ GN Q Q + ++ Q
Sbjct: 697 QTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQSQSVNMPQ 756
Query: 804 QGMVYSRPLPNFSIAPQAAPV-AVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSV 862
+ + P N+S+ Q + VS P+ QQYQ A S + YG + + + +G +
Sbjct: 757 LSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEA-SMPNQNYGPIPSYQQANFHGVTT 815
Query: 863 FQQPNNPTAVSNQVNLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKN 922
Q N +N SQ Q M DK NLE N +LQ ++SG GQGT+DGEVDKN
Sbjct: 816 NQAQN--------LNPSQFQAAMQPPADKANLEPQNQALRLQPMISGDGQGTTDGEVDKN 867
Query: 923 QRYQSTLQFAANLLLQIQQQQQTNS---PAGRG 952
QRYQSTLQFAANLLLQIQQ+QQ S PAG+G
Sbjct: 868 QRYQSTLQFAANLLLQIQQKQQQQSSGTPAGQG 900
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 39/191 (20%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ A P +LWVG + + + L+E F KFG ++ R AF+ + ++DA AK
Sbjct: 89 RPAKPCKSLWVGGIGPNVSKDGLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK- 147
Query: 75 ALQGSDFRGNPIKIEFAR---PAK--------------------------------PSKH 99
++ G G+ ++++F R P K PSK
Sbjct: 148 SMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKPQYPHSYEDFKGDVQPSKV 207
Query: 100 LWVG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
LW+G +Q ++ L + FG IE K N A VE+ E+A + + + GR
Sbjct: 208 LWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEARQCKEGLQGR 267
Query: 157 QIGGEQLRVDF 167
++++ +
Sbjct: 268 LFNNPRIKIMY 278
>gi|147801865|emb|CAN74982.1| hypothetical protein VITISV_007871 [Vitis vinifera]
Length = 1976
Score = 640 bits (1651), Expect = e-180, Method: Compositional matrix adjust.
Identities = 394/791 (49%), Positives = 494/791 (62%), Gaps = 102/791 (12%)
Query: 209 QSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSV 268
QSSV R +G PS +LWVGYPPS+Q++EQML+NAMILFGEIERIKS+PSR+YSFVEFRS+
Sbjct: 1246 QSSVIRKGEGQPSNVLWVGYPPSIQLEEQMLYNAMILFGEIERIKSFPSRHYSFVEFRSI 1305
Query: 269 DEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQL 328
DEARRAKEGLQGRLFNDPRI+IM+SSS + PGK+Y G R + F +++ +
Sbjct: 1306 DEARRAKEGLQGRLFNDPRISIMYSSSGVVPGKEYN---PGIPESRPDTFV-NELPFRHV 1361
Query: 329 DMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKDFHSM---QDP 385
D+ PN M NNF G P+ I ++ MR++G+H E SGP + ++ QD
Sbjct: 1362 DVFSPNGPMVSNNFPGPSPPSGILASNV-MRTVGSH---EPPRSGPGLNELAALRNFQDT 1417
Query: 386 NAKNL-DPNWRRPSPSP-GIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRLRVDGSM 443
+ NL PNWRRPSPS G+ SP IR + +WDV DANQFQRDSKR RVDG++
Sbjct: 1418 SPNNLMGPNWRRPSPSTLGMLPSPVPSIRPSVRPVSAAWDVSDANQFQRDSKRSRVDGAV 1477
Query: 444 PIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGFGR 503
I + +FP RK DD GL LD YG G AS +F N+QG+NR V ++T +
Sbjct: 1478 SISNPSFPLRKSDDLGLGLDDLYGQHD---GSASSSFSNIQGKNRSGLVDPRLTNAVAAQ 1534
Query: 504 NPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIG 563
+ +D+IWRGIIAKGG VC ARCV KG+ S+LPE+VNCSARTGLD+L KHYAEA+G
Sbjct: 1535 SHSGTDYIWRGIIAKGGATVCHARCVAIEKGLSSKLPEIVNCSARTGLDLLTKHYAEAVG 1594
Query: 564 FDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPE 623
F++VFFLPDSEDDFASYTEFL YLGSK+RAGVAK DDGTTLFLVPPSDFLSKVLKV GPE
Sbjct: 1595 FEVVFFLPDSEDDFASYTEFLCYLGSKDRAGVAKLDDGTTLFLVPPSDFLSKVLKVSGPE 1654
Query: 624 RLYGVVLKLPQQA-------------MVPPQTVDKQNIPPPHAEYGLTRPKEEHVLPVDY 670
RLYGVVLKL QQ + Q D+Q I PPH EY L KE
Sbjct: 1655 RLYGVVLKLAQQVPSAASMQQQSHRPVPSSQYSDRQQI-PPHVEYSLIPQKER------- 1706
Query: 671 NRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSLIP 730
P SE L S S D S+N A +SQAG+ LTPELIA L SL+P
Sbjct: 1707 ----------------PSTSESLATQSISQDRASSNTAVVSQAGLTLTPELIAHLASLLP 1750
Query: 731 ------ATKSAEVAPGSSSARPLL---AEPHVQSI-------------EQLGNHYNPQAQ 768
A+ SA + GSS ARP L P ++ +Q GN ++PQAQ
Sbjct: 1751 GGMQSSASVSAPQSLGSSIARPSLPPSVAPDRGTLSQGRNQDHQTPPSQQSGNQFHPQAQ 1810
Query: 769 SL--THHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSIAPQAAPVAV 826
L +Y +++ TP H+A + + + Q+Q++T +L Q G + SRPL N + Q+ AV
Sbjct: 1811 PLPQFQNYPTVTQTPGHTA-LAVPDGQIQDNTFNLPQLGTISSRPLTNLPVPSQSGQFAV 1869
Query: 827 SPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQVNLSQPQNVMT 886
SP V+QQYQ NSQ YGM + + PT S+QV+ +
Sbjct: 1870 SPQVNQQYQLEIHQNSQNAYGM---------------GRADGPTTFSSQVDGAS------ 1908
Query: 887 VSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLLLQIQQQQQTN 946
++VN PN VQQLQS+++GAGQ SD + DK+QRYQST+QFAA+LL QI++QQQ
Sbjct: 1909 ---NRVNPALPNQVQQLQSMINGAGQWLSDDDADKSQRYQSTIQFAADLLEQIRKQQQQT 1965
Query: 947 SPAGRGTGNQQ 957
+ A + G QQ
Sbjct: 1966 NQAEQWPGKQQ 1976
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 145/221 (65%), Gaps = 18/221 (8%)
Query: 1 MAPPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAF 60
MAP R ++ E P S LWVGN+ T++DL +F +FGALD +YSSRSFAF
Sbjct: 577 MAP---LIRRDAENSEVHPFS-LWVGNVGNSVTESDLLAVFSRFGALDCFISYSSRSFAF 632
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLK 120
VYF+R EDA+AA++ALQG G P+KIEFARPAKP K LWVGG S + +K ELE FLK
Sbjct: 633 VYFRRGEDARAAREALQGMVVLGTPMKIEFARPAKPCKSLWVGGFSPSTTKGELENEFLK 692
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
FG IEDFKF D N+A VEY +LEDA++ALK +NG+QIGG +RVDFLR Q SRREQ P
Sbjct: 693 FGKIEDFKFFWDRNSALVEYVKLEDASQALKGLNGKQIGGAMIRVDFLRLQTSRREQGPE 752
Query: 181 SHDARDGPIIGRGTG--------------FSDNHSAYKRSH 207
D RDG R TG +S+ +S KR H
Sbjct: 753 FLDTRDGQFSSRTTGHLNSAWMPQDSIINYSEPYSGSKRQH 793
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 50/194 (25%)
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
LWVG + +V++ +L F +FG ++ F + AFV + R EDA A + + G +
Sbjct: 595 LWVGNVGNSVTESDLLAVFSRFGALDCFISYSSRSFAFVYFRRGEDARAAREALQGMVVL 654
Query: 160 GEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGP 219
G ++++F R P++
Sbjct: 655 GTPMKIEFAR--PAK--------------------------------------------- 667
Query: 220 PSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGL 278
P K LWVG + PS E L N + FG+IE K + RN + VE+ +++A +A +GL
Sbjct: 668 PCKSLWVGGFSPSTTKGE--LENEFLKFGKIEDFKFFWDRNSALVEYVKLEDASQALKGL 725
Query: 279 QGRLFNDPRITIMF 292
G+ I + F
Sbjct: 726 NGKQIGGAMIRVDF 739
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 16 EAPPSSNLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
E PS+ LWVG S + L FG ++++ ++ SR ++FV F+ +++A+ AK+
Sbjct: 1254 EGQPSNVLWVGYPPSIQLEEQMLYNAMILFGEIERIKSFPSRHYSFVEFRSIDEARRAKE 1313
Query: 75 ALQGSDFRGNPIKIEFA 91
LQG F I I ++
Sbjct: 1314 GLQGRLFNDPRISIMYS 1330
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 216 RDGPPSKI----LWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEA 271
RD S++ LWVG + + E L FG ++ SY SR+++FV FR ++A
Sbjct: 583 RDAENSEVHPFSLWVGNVGN-SVTESDLLAVFSRFGALDCFISYSSRSFAFVYFRRGEDA 641
Query: 272 RRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSY--SGTKGPRSEMFF 319
R A+E LQG + + I F+ + G + S TKG F
Sbjct: 642 RAAREALQGMVVLGTPMKIEFARPAKPCKSLWVGGFSPSTTKGELENEFL 691
>gi|61661314|gb|AAX51263.1| FPA [Arabidopsis thaliana]
Length = 1056
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 412/919 (44%), Positives = 519/919 (56%), Gaps = 169/919 (18%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
AKP K LWVGGI VSK++LEE F KFG IEDF+FL++ TAF++Y ++DA +A K++
Sbjct: 246 AKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSM 304
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
NG+ +GG LRVDFLRSQ ++EQW S+D R+G + NH K +P S
Sbjct: 305 NGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNM---------NH---KPQYPHSYED 352
Query: 214 RNRDGPPSKILWVGYPPSVQM--DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEA 271
D PSK+LW+G+PP+ DEQ+LHNAMILFGEIER+KSYPSRN++ VEFRS +EA
Sbjct: 353 FKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEA 412
Query: 272 RRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDML 331
R+ KEGLQGRLFN+PRI IM+S+ EL P +D YSG K R++MF D PS
Sbjct: 413 RQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSGMKRSRTDMFNND---PS----- 464
Query: 332 GPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKDFHSMQDPNAKNLD 391
F I G P+R G +E +G ++ D +
Sbjct: 465 ----------FVSSPHSTGIPGSMRPLR-----GTNERSYNGAEYND--------VVGKE 501
Query: 392 PNWRRPS-------PSP---GIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRLRVDG 441
PNWRRPS PSP GI SP QG R+P+ P SW+ YD Q R+SKR R DG
Sbjct: 502 PNWRRPSANGTGLLPSPTGPGILPSPAQGTRRPMRSNPDSWEGYDPAQLVRESKRTRRDG 561
Query: 442 SMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGF 501
S+ F +D+ +S+G GS+ P G
Sbjct: 562 SV----DGFTPMGVDE------RSFGRGSVAARPIRG----------------------- 588
Query: 502 GRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEA 561
P DSD IWRG+IAKGGTPVC ARCVP GKGIE++LPEVVNCSART L+MLAKHYA A
Sbjct: 589 ---PPDSDHIWRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSARTDLNMLAKHYAVA 645
Query: 562 IGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVG 621
IG +IVFF+PD E+DFASYTEFLRYL SK+RAGVAK DDGTTLFLVPPSDFL+ VL+V
Sbjct: 646 IGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLVPPSDFLTDVLQVTR 705
Query: 622 PERLYGVVLKLPQQAM------------VPPQTVDKQNIPPPHAEYGLTRPKEEHVLPVD 669
ERLYGVVLKLP A+ P +D+ P +A + L P+E ++
Sbjct: 706 QERLYGVVLKLPPPAVPVTASYRQESQSNPLHYMDQARDSPANASHSLYPPRENYI---- 761
Query: 670 YNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSLI 729
R + + SK P SEPL NNAA QAGV LTPEL+ATL S++
Sbjct: 762 --RGAPEHLTAASK---PSVSEPLRI--------PNNAAP--QAGVSLTPELLATLASIL 806
Query: 730 PATKSAEVAPGS----SSARPLLAEPHV--------------------------QSIEQL 759
PAT S AP S S +++ H QS +Q
Sbjct: 807 PAT-SQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAPSQAWKRGPQTVHDASNQSFQQY 865
Query: 760 GNHYNPQAQ--SLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSI 817
GN Y P Q Y S+ P++++ M+ GN Q Q + ++ Q + + P N+S+
Sbjct: 866 GNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQSQSVNMPQLSPLPNMPHNNYSM 925
Query: 818 APQAAPV-AVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQV 876
Q + VS P+ QQYQ A S + YG + + + +G + Q N +
Sbjct: 926 YTQGSSNHPVSQPMVQQYQPEA-SMPNQNYGPIPSYQQANFHGVTTNQAQN--------L 976
Query: 877 NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLL 936
N SQ Q M DK NLE N +LQ ++SG GQGT+DGEVDKNQRYQSTLQFAANLL
Sbjct: 977 NPSQFQAAMQPPADKANLEPQNQALRLQPMISGDGQGTTDGEVDKNQRYQSTLQFAANLL 1036
Query: 937 LQIQQQQQTNS---PAGRG 952
LQIQQ+QQ S PAG+G
Sbjct: 1037 LQIQQKQQQQSSGTPAGQG 1055
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 55/64 (85%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVG+L+ +TT++DL ELFG++G +D++T YSSR FAF+Y++ VE+A AAK+ALQG+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 80 DFRG 83
+ G
Sbjct: 77 NLNG 80
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 39/189 (20%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
A P +LWVG + + + DL+E F KFG ++ R AF+ + ++DA AK ++
Sbjct: 246 AKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK-SM 304
Query: 77 QGSDFRGNPIKIEFAR---PAK--------------------------------PSKHLW 101
G G+ ++++F R P K PSK LW
Sbjct: 305 NGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKPQYPHSYEDFKGDVQPSKVLW 364
Query: 102 VG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQI 158
+G +Q ++ L + FG IE K N A VE+ E+A + + + GR
Sbjct: 365 IGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEARQCKEGLQGRLF 424
Query: 159 GGEQLRVDF 167
++++ +
Sbjct: 425 NNPRIKIMY 433
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 7 KFNRAYDD--KEAPPSSNLWVGNLSADTTDADLKELFGK---FGALDKVTTYSSRSFAFV 61
++ +Y+D + PS LW+G T D + L FG +++V +Y SR+FA V
Sbjct: 345 QYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALV 404
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKP 96
F+ E+A+ K+ LQG F IKI ++ P
Sbjct: 405 EFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELP 439
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 221 SKILWVG--YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGL 278
S LWVG P + + D L +G+I+RI Y SR ++F+ +R V+EA AKE L
Sbjct: 17 SNNLWVGSLTPETTESD---LTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEAL 73
Query: 279 QGRLFN 284
QG N
Sbjct: 74 QGANLN 79
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
S +LWVG ++ ++ +L E F ++G+I+ AF+ Y +E+A A + + G
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 157 QIGG 160
+ G
Sbjct: 77 NLNG 80
>gi|2288985|gb|AAB64314.1| hypothetical protein [Arabidopsis thaliana]
Length = 1056
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 412/919 (44%), Positives = 519/919 (56%), Gaps = 169/919 (18%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
AKP K LWVGGI VSK++LEE F KFG IEDF+FL++ TAF++Y ++DA +A K++
Sbjct: 246 AKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSM 304
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
NG+ +GG LRVDFLRSQ ++EQW S+D R+G + NH K +P S
Sbjct: 305 NGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNM---------NH---KPQYPHSYED 352
Query: 214 RNRDGPPSKILWVGYPPSVQM--DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEA 271
D PSK+LW+G+PP+ DEQ+LHNAMILFGEIER+KSYPSRN++ VEFRS +EA
Sbjct: 353 FKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEA 412
Query: 272 RRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDML 331
R+ KEGLQGRLFN+PRI IM+S+ EL P +D YSG K R++MF D PS
Sbjct: 413 RQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSGMKRSRTDMFNND---PS----- 464
Query: 332 GPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKDFHSMQDPNAKNLD 391
F I G P+R G +E +G ++ D +
Sbjct: 465 ----------FVSSPHSTGIPGSMRPLR-----GTNERSYNGAEYND--------VVGKE 501
Query: 392 PNWRRPS-------PSP---GIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRLRVDG 441
PNWRRPS PSP GI SP QG R+P+ P SW+ YD Q R+SKR R DG
Sbjct: 502 PNWRRPSANGTGILPSPTGPGILPSPAQGTRRPMRSNPDSWEGYDPAQLVRESKRTRRDG 561
Query: 442 SMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGF 501
S+ F +D+ +S+G GS+ P G
Sbjct: 562 SV----DGFTPMGVDE------RSFGRGSVAARPIRG----------------------- 588
Query: 502 GRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEA 561
P DSD IWRG+IAKGGTPVC ARCVP GKGIE++LPEVVNCSART L+MLAKHYA A
Sbjct: 589 ---PPDSDHIWRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSARTDLNMLAKHYAVA 645
Query: 562 IGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVG 621
IG +IVFF+PD E+DFASYTEFLRYL SK+RAGVAK DDGTTLFLVPPSDFL+ VL+V
Sbjct: 646 IGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLVPPSDFLTDVLQVTR 705
Query: 622 PERLYGVVLKLPQQAM------------VPPQTVDKQNIPPPHAEYGLTRPKEEHVLPVD 669
ERLYGVVLKLP A+ P +D+ P +A + L P+E ++
Sbjct: 706 QERLYGVVLKLPPPAVPVTASYRQESQSNPLHYMDQARDSPANASHSLYPPRENYI---- 761
Query: 670 YNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSLI 729
R + + SK P SEPL NNAA QAGV LTPEL+ATL S++
Sbjct: 762 --RGAPEHLTAASK---PSVSEPLRI--------PNNAAP--QAGVSLTPELLATLASIL 806
Query: 730 PATKSAEVAPGS----SSARPLLAEPHV--------------------------QSIEQL 759
PAT S AP S S +++ H QS +Q
Sbjct: 807 PAT-SQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAPSQAWKRGPQTVHDASNQSFQQY 865
Query: 760 GNHYNPQAQ--SLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSI 817
GN Y P Q Y S+ P++++ M+ GN Q Q + ++ Q + + P N+S+
Sbjct: 866 GNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQSQSVNMPQLSPLPNMPHNNYSM 925
Query: 818 APQAAPV-AVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQV 876
Q + VS P+ QQYQ A S + YG + + + +G + Q N +
Sbjct: 926 YTQGSSNHPVSQPMVQQYQPEA-SMPNQNYGPIPSYQQANFHGVTTNQAQN--------L 976
Query: 877 NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLL 936
N SQ Q M DK NLE N +LQ ++SG GQGT+DGEVDKNQRYQSTLQFAANLL
Sbjct: 977 NPSQFQAAMQPPADKANLEPQNQALRLQPMISGDGQGTTDGEVDKNQRYQSTLQFAANLL 1036
Query: 937 LQIQQQQQTNS---PAGRG 952
LQIQQ+QQ S PAG+G
Sbjct: 1037 LQIQQKQQQQSSGTPAGQG 1055
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 55/64 (85%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVG+L+ +TT++DL ELFG++G +D++T YSSR FAF+Y++ VE+A AAK+ALQG+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 80 DFRG 83
+ G
Sbjct: 77 NLNG 80
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 39/189 (20%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
A P +LWVG + + + DL+E F KFG ++ R AF+ + ++DA AK ++
Sbjct: 246 AKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK-SM 304
Query: 77 QGSDFRGNPIKIEFAR---PAK--------------------------------PSKHLW 101
G G+ ++++F R P K PSK LW
Sbjct: 305 NGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKPQYPHSYEDFKGDVQPSKVLW 364
Query: 102 VG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQI 158
+G +Q ++ L + FG IE K N A VE+ E+A + + + GR
Sbjct: 365 IGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEARQCKEGLQGRLF 424
Query: 159 GGEQLRVDF 167
++++ +
Sbjct: 425 NNPRIKIMY 433
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 7 KFNRAYDD--KEAPPSSNLWVGNLSADTTDADLKELFGK---FGALDKVTTYSSRSFAFV 61
++ +Y+D + PS LW+G T D + L FG +++V +Y SR+FA V
Sbjct: 345 QYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALV 404
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKP 96
F+ E+A+ K+ LQG F IKI ++ P
Sbjct: 405 EFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELP 439
Score = 47.0 bits (110), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 221 SKILWVG--YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGL 278
S LWVG P + + D L +G+I+RI Y SR ++F+ +R V+EA AKE L
Sbjct: 17 SNNLWVGSLTPETTESD---LTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEAL 73
Query: 279 QGRLFN 284
QG N
Sbjct: 74 QGANLN 79
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
S +LWVG ++ ++ +L E F ++G+I+ AF+ Y +E+A A + + G
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 157 QIGG 160
+ G
Sbjct: 77 NLNG 80
>gi|61611731|gb|AAX47183.1| FPA [Pisum sativum]
Length = 607
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 289/626 (46%), Positives = 370/626 (59%), Gaps = 98/626 (15%)
Query: 366 GHETLLSGPDFKD---FHSMQDPNAKN-LDPNWRRPSP-SPGIRTSPTQGIRQPLNHAPG 420
G E++ SGPDF + H QD + N + PNW+RPSP +PG+ +SP G R P+ A G
Sbjct: 3 GPESVFSGPDFNESSTLHQFQDSSLTNRMGPNWKRPSPPAPGLLSSPATGARLPVRSASG 62
Query: 421 SWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAF 480
+WDV D N RDSKR R+D ++P DDA YG
Sbjct: 63 AWDVLDVNNISRDSKRSRIDATLPNDDAP----------------YG------------- 93
Query: 481 VNVQGRNRLSPVASKVTAGGF-GRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESEL 539
++ GR L P ++++T G P D D IWRG+IAKGG+PVC ARC+P GKGI +EL
Sbjct: 94 -DIHGRGILGPGSTRITGGVHPSVQPGDMDHIWRGLIAKGGSPVCHARCIPIGKGIGAEL 152
Query: 540 PEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFD 599
PEVV+CSARTGLD+LAKHYA+AI F+IVFFLPDSEDDF++YTEFLRYLG+KNRAGVAKF
Sbjct: 153 PEVVDCSARTGLDVLAKHYADAIDFEIVFFLPDSEDDFSAYTEFLRYLGAKNRAGVAKFG 212
Query: 600 DGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKL-PQQAMVPPQTVDK----------QNI 648
+ TTLFLVPPSDFL+KVLKV GPERLYGVVLK P VP + Q
Sbjct: 213 N-TTLFLVPPSDFLTKVLKVNGPERLYGVVLKFAPVPNGVPMHHSSEMPTPSPNQYMQQF 271
Query: 649 PPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAA 708
PP AEY + K++ VLP+DYNR H+DSK+ +K +P P + S++ DY N A+
Sbjct: 272 PPSQAEYDMNPAKDDQVLPMDYNRMLHEDSKLPAKQVYPPIGGPSV-QSAAPDYAPNTAS 330
Query: 709 AISQAGVKLTPELIATLTSLIP------ATKSAEVAPGSSSARP---------------- 746
SQAGV LTPELIATL S +P AT A+ A GSS+ RP
Sbjct: 331 G-SQAGVALTPELIATLASFLPTNAQSSATNGAKSAVGSSTVRPPFPPVAPNDGNQSQLW 389
Query: 747 ----LLAEPHVQSIEQLGNHYNPQAQSLTHHYASM--SSTPSHSAQMLLGNNQLQESTAS 800
+A+ + +Q N YN + H+ +S P H++Q+ G++ +++T S
Sbjct: 390 KQDHQIADQSIHPPQQFRNMYN----NHNTHFQPYPPASAPGHTSQVFSGSSHTRDNTLS 445
Query: 801 LSQQGMVYSRPLPNFSIAPQAAPVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGS 860
QQG+V SR + NF Q+ V SP QYQ P NSQKG+G++ G++AS LY S
Sbjct: 446 QQQQGVVSSRHMSNFVTPSQSGQVPASPHFSHQYQAEVPPNSQKGFGVVPGSDASVLYNS 505
Query: 861 SV----------FQQPNNPTAVSNQVNLSQPQN--VMTVSVDKVNLEHPNHVQQLQSVLS 908
FQQPNN A+S+Q + + PQ+ VM + D+ N P +QQ +
Sbjct: 506 QAFQQPSSKPQSFQQPNNSIALSSQASSTNPQHQPVMQYTADQTNSNPP--IQQHPAF-- 561
Query: 909 GAGQGTSDGEVDKNQRYQSTLQFAAN 934
G QGT D E DKNQRYQSTLQFAAN
Sbjct: 562 GVSQGTPDLEADKNQRYQSTLQFAAN 587
>gi|357154289|ref|XP_003576733.1| PREDICTED: flowering time control protein FPA-like [Brachypodium
distachyon]
Length = 875
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 343/963 (35%), Positives = 486/963 (50%), Gaps = 152/963 (15%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-SRSFAFVYFKRVEDAKAAKDALQG 78
++ LWVGNL ++ D+ F GALD V T + SRS++FV F+ + +++AA +AL+G
Sbjct: 38 TNTLWVGNLPPFASEDDVMAAFTAHGALDCVLTRAGSRSYSFVLFRSLSESRAALEALRG 97
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
+ +G+ I+IEFARPA+ ++LWVGGIS ++SKEELEE F KFG IE F +D +A++
Sbjct: 98 AKVKGSSIRIEFARPARAIRNLWVGGISPSISKEELEEEFQKFGKIEGVAFSRDQTSAYI 157
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ-PSRREQWPNSHDARDGPIIGRGTGFS 197
++ +LEDA A + +NG +GG++L VDF RS+ + R + N + P + G G
Sbjct: 158 DFEKLEDAISAHRALNGTVLGGKELCVDFQRSRGRAERSEASNFNVRGSMPPVDMGFG-- 215
Query: 198 DNHSAYKRSHPQSSVG-RNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP 256
H + G R R+G P+ +LWVG P + +++E+ L M G + IK++P
Sbjct: 216 ---------HAKGPAGVRLREGNPTNVLWVGLPNTHKINEEALRRTMAAHGVVTNIKTFP 266
Query: 257 SRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK----DYPGSYSGTKG 312
R Y+FVEF +V+ A AK L GRLFND RI ++FS+SELAP K P +
Sbjct: 267 ERQYAFVEFATVEGASNAKNLLDGRLFNDSRIHVLFSNSELAPNKLDNLSPPAGF----- 321
Query: 313 PRSEMFFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLS 372
PRSEM+ R + D GP + G+HG L
Sbjct: 322 PRSEMY--SDSRYAAPDYSGPGR--------------------------GSHGA----LQ 349
Query: 373 GPDFKDFHSMQDPNAKNLDPNWRRPSPSPGIRTSPTQGIRQPLNHAPGSWDVYDANQFQR 432
G D + S + LD + + GI +P G + + +V+D R
Sbjct: 350 GYDPRRGRS------RYLD--YDAVPITSGILPAPEAGSSSLTGRS--AQNVFDP----R 395
Query: 433 DSKRLRVD-GSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSP 491
++KR+R+D G+ P D + GL D G+ + + +QG
Sbjct: 396 ETKRMRLDAGADPYD------VRAGADGLHHD-----GAAHAEESLNTVIRIQG------ 438
Query: 492 VASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGL 551
+ T+ G WRG +AK G PVCR RC+ KGIE LP+VVNCSARTGL
Sbjct: 439 -TVQQTSSSLGH-------FWRGSLAKCGAPVCRVRCLSIRKGIEIPLPDVVNCSARTGL 490
Query: 552 DMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSD 611
D+L HY EA GFDIVFFLPDSEDDF YTEFLRYLGSK+RAGV KFD G TLFLVPPSD
Sbjct: 491 DLLEMHYREASGFDIVFFLPDSEDDFVCYTEFLRYLGSKSRAGVVKFDQGATLFLVPPSD 550
Query: 612 FLSKVLKVVGPERLYGVVLKLPQ---QAMVPPQTVDKQNIPPPHAEYGLTRPKEEHVLPV 668
FL+ VL+V GPERLYGVVL +PQ A PQ ++ P E + + V
Sbjct: 551 FLTNVLQVDGPERLYGVVLHIPQIPTAAFQRPQLTGPESQQPYDDERETMFTAQRNYSMV 610
Query: 669 DYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSL 728
N H D+ + + L ++ ++ G QA L P+++ATL L
Sbjct: 611 SSNDNHHLDAHYRGALREEAVQLALSSYPTTQTAG-------QQAQSSLKPDIMATLAKL 663
Query: 729 IPATKSAEVAPGSSSARPLLAEPHVQSIEQLGNHYNPQAQS--LTHHYASMSSTPSHSAQ 786
IP +S+ P +S + +++Q G ++ QA S LT Y SM HS
Sbjct: 664 IPNVQSS--VPVTS---------QMGNLQQPGQQFSTQAPSAHLT-SYGSMVGAQEHSTH 711
Query: 787 MLLGNNQLQESTASLSQQGMVYSRPLPNFSIAPQAAPVAVSPPVHQQYQFAAPSNSQKGY 846
N ++ + + + S+ + P ++ +Q Q+ SQ Y
Sbjct: 712 HTAYNPEIALNLPPPPPVPTLAPGAVMPSSMGGYSLPTQMNQQQYQPEQYYV---SQSNY 768
Query: 847 GMMQGTEASTLYGSSVFQQ-------------PNNPTAVSNQVNLSQPQNVMTVSVDKVN 893
G++ S L S+ NN S Q++L+ P D+VN
Sbjct: 769 GLLPTASQSNLQASNNNLPAPPPPQLNNGPLPANNQVGNSTQLHLAAP-----FPADRVN 823
Query: 894 LEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLLLQIQQQQQTNSPAGRGT 953
+ + QQ Q+V SG+ Q E DKN++YQ+TLQFA NLLLQ+Q RG+
Sbjct: 824 QDFSSQAQQQQNVASGSVQAPD--EADKNKKYQATLQFAHNLLLQLQ----------RGS 871
Query: 954 GNQ 956
GNQ
Sbjct: 872 GNQ 874
>gi|449520984|ref|XP_004167512.1| PREDICTED: flowering time control protein FPA-like, partial
[Cucumis sativus]
Length = 557
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 276/569 (48%), Positives = 353/569 (62%), Gaps = 60/569 (10%)
Query: 436 RLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASK 495
R R+DG ++D +FP RK+D+ + DQ YG+G I+ G +S + N + P+ ++
Sbjct: 1 RSRIDGPPSLEDVSFPPRKMDNRSMGFDQQYGIGPISDGGSSVPYANAPAKTPPIPIGAR 60
Query: 496 VTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLA 555
G G++ ++DFIWRGIIAKGGTPVC ARCVP G+GI SELPEVVNCSARTGLD L
Sbjct: 61 APISGPGQSHAENDFIWRGIIAKGGTPVCHARCVPIGEGIGSELPEVVNCSARTGLDQLT 120
Query: 556 KHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSK 615
KHYAEA GFDIVFFLPDSEDDFASYTEFLRYLG+KNRAGVAKFDDGTT+FLVPPS+FL K
Sbjct: 121 KHYAEATGFDIVFFLPDSEDDFASYTEFLRYLGAKNRAGVAKFDDGTTMFLVPPSEFLRK 180
Query: 616 VLKVVGPERLYGVVLKL---------PQQAMVPPQTVD---KQNIPPPHAEYGLTRPKEE 663
VLKV GPERLYG+VLK PQQ+ +P T D +Q++ P EYG K+E
Sbjct: 181 VLKVSGPERLYGLVLKFPQVSVSEPAPQQSYLPVSTSDYGERQHVLPSQTEYGSVPSKQE 240
Query: 664 HVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDY-GSNNAAAISQAGVKLTPELI 722
+ P+DY+R HD+ K K PL+ S +Y G+NN A ISQAG+ LTPELI
Sbjct: 241 QLPPMDYSRVLHDEIKEPPK--------PLLPTSEPQEYSGNNNTATISQAGLALTPELI 292
Query: 723 ATLTSLIPA---TKSAEVA-------------------PGSSSARPLL----AEPHVQSI 756
ATL SL+P + S E A G++S ++ ++ + Q
Sbjct: 293 ATLVSLLPGKTQSSSLESAKQPAVSPQPPVPIPPVVSNKGATSEGWMVGHQSSDLNGQPF 352
Query: 757 EQLGNHYNPQAQSLTHH--YASMSSTPSHSAQMLLGNNQLQESTASLSQQGMV--YSRPL 812
+Q+GNH+NPQ QSL+ Y + TP+ A +G +Q+Q++ SL QQ V RPL
Sbjct: 353 QQMGNHFNPQGQSLSQFQPYPPLPQTPNQHAPQAIGTSQIQDAAVSLPQQQQVPIPYRPL 412
Query: 813 PNFSIAP--QAAPVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPT 870
+S P QA+ +A++ QYQ SQ+GYG + G + S YG V QQ N
Sbjct: 413 STYSAPPENQASGLALA---SSQYQHDVSQMSQRGYGPVNGVDTSG-YGPPVMQQSTNTV 468
Query: 871 AVSN--QVNLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQST 928
+SN Q + +Q Q + ++ D+VN E P +Q LQS G G G SD E K+QRY+ST
Sbjct: 469 TLSNHGQSSTTQSQPITQLASDRVNPELPYQMQHLQSANLGTGTGPSDVESGKDQRYRST 528
Query: 929 LQFAANLLL-QIQQQQQTNSPAGRGTGNQ 956
LQFAANLLL QQQQQ AG G+GNQ
Sbjct: 529 LQFAANLLLQIQQQQQQQQQQAGWGSGNQ 557
>gi|168011117|ref|XP_001758250.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690706|gb|EDQ77072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1252
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 305/855 (35%), Positives = 433/855 (50%), Gaps = 160/855 (18%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
D ++ PPS +LW+GN+S D T+A ++E F + G +D VT YSSR++AFV F+ + DA A
Sbjct: 61 DHEDTPPSRHLWIGNVSHDATEAAIREKFSQIGDVDSVTVYSSRNYAFVNFRNLHDAVEA 120
Query: 73 KDALQGSDFRGNPIKIEFARP----------------------------AKPSKHLWVGG 104
K+ LQG G I+IE+A+ A S+HLWVGG
Sbjct: 121 KNRLQGFVIGGMAIRIEYAKGRNMLSELARYRDKDSDHVKCMEEQVAARATQSRHLWVGG 180
Query: 105 ISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
IS V+KE++E F +G +EDFK L++ N AFV+Y R+EDA A++ +N ++IG E+LR
Sbjct: 181 ISPNVTKEQIEGEFRNYGVLEDFKLLRERNCAFVDYIRIEDAVNAVEALNRKRIGDEELR 240
Query: 165 VDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKIL 224
VD+ RSQPS+R+ + ++DG G + R V ++DG PS+IL
Sbjct: 241 VDYGRSQPSKRDSRGDQKSSQDGYNSQHGLQGGSGNGVEGR------VKADKDGGPSEIL 294
Query: 225 WVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFN 284
WVG+P ++DE L A + +GE+ER+K++P R Y+FV+F+ V+EA RAK L G+LF+
Sbjct: 295 WVGFPLPSKVDEDGLRRAFMPYGEVERVKTFPGRTYAFVQFQKVEEATRAKNALDGKLFD 354
Query: 285 DPRITIMFSSSELAP---GKDYPGSYSGTK-GPRSEMFFGDQ-IRPSQLDMLGP--NQSM 337
DPR+ I +S SE+ P +D P S + + G +++ G + + P+ +D G S
Sbjct: 355 DPRVHIRYSKSEIGPIDSPRDGPPSRTADRQGFSTDVLGGPRGMPPAAIDRFGSPGRTSA 414
Query: 338 QPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKDFHSMQDPNAKNLDPNWRRP 397
P+ G L+P + R P+ M + G P + +L+ + R
Sbjct: 415 NPSTRLGGLRP-EYR-PNALMAGLVDRGSSRESDVEPGMGRTSHRNVSHIDDLE--YSR- 469
Query: 398 SPSPGIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPS----- 452
GIR R + A WD+ DA+ R+SKRLRV D S
Sbjct: 470 ----GIRPDS----RSSYDDA---WDLPDADIVPRESKRLRVYPGGGADSPGLESWYDQR 518
Query: 453 -RKIDDHGLVL-----------------DQSYGLGSITGGPASGAFVNVQGRNRLSPVAS 494
+ D G + D S+GLGS GA N N L P+ S
Sbjct: 519 PQPSSDSGSYVGTGVSNNYENLRVPAAPDYSFGLGSRPRVGLPGAESN----NSL-PIGS 573
Query: 495 KVTAGGFG------RNPIDSDFI--------------WRGIIAKGGTPVCRARCVPFGKG 534
+ G PI S + W G IAKGGTPVCRARC+P GKG
Sbjct: 574 RPAVVGHAPPPNSSVIPISSTYAKHSVEDVKEPEGWQWHGTIAKGGTPVCRARCLPVGKG 633
Query: 535 IESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAG 594
I++ +P+VVNC+ART LDMLAKH +A GF +VFF+P+ + D Y +F+ YLG K+RAG
Sbjct: 634 IDATVPDVVNCTARTDLDMLAKHVYQAGGFGVVFFVPEGDPDVPPYQDFMHYLGEKHRAG 693
Query: 595 VAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLK-LPQQAMV--------------- 638
VAK DGTTLFLVPPS+F KVLKV G L+GVVLK P A V
Sbjct: 694 VAKLSDGTTLFLVPPSEFSEKVLKVPGDNCLFGVVLKSQPVSAPVISYNLSAQQQQQISS 753
Query: 639 ------PPQTVDKQNIPPPHAEYGLTRPKEEHVLPVD----YNRFSHDDSKVQSKMHFPH 688
P Q + Q+ P + Y + +HVLP+ Y F H PH
Sbjct: 754 LAHPPYPQQQIPSQHAPASQSLYSQNQVLPQHVLPIQEPAPYQGFHHS---------LPH 804
Query: 689 ASEPL-------IAHSSSMDYG-----SNNAAAISQAGVK--------LTPELIATLTSL 728
+P I+ + S+ G SN+ ++QA + LTPELIA+LT+L
Sbjct: 805 DEQPAQTGLSTSISLNDSLASGVPISNSNSRPMLTQAQLGSIAGLPGVLTPELIASLTAL 864
Query: 729 IPATKSAEVAPGSSS 743
+P T + + + + S
Sbjct: 865 LPKTNNGQASSSTDS 879
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 10 RAYDDKEAPPSSNLWVGNLSADTTDAD-LKELFGKFGALDKVTTYSSRSFAFVYFKRVED 68
R DK+ PS LWVG D D L+ F +G +++V T+ R++AFV F++VE+
Sbjct: 281 RVKADKDGGPSEILWVGFPLPSKVDEDGLRRAFMPYGEVERVKTFPGRTYAFVQFQKVEE 340
Query: 69 AKAAKDALQGSDFRGNPIKIEFAR 92
A AK+AL G F + I +++
Sbjct: 341 ATRAKNALDGKLFDDPRVHIRYSK 364
>gi|145360944|ref|NP_181869.2| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255168|gb|AEC10262.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 858
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 342/960 (35%), Positives = 462/960 (48%), Gaps = 223/960 (23%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
S +LWVG ++ ++ +L E F ++G+I+ AF+ Y +E+A A + + G
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 157 QIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNR 216
+ G Q+++++ R P++
Sbjct: 77 NLNGSQIKIEYAR--PAK------------------------------------------ 92
Query: 217 DGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAK 275
P K LWVG P+V D+ L FG+IE + R +F+++ +D+A +AK
Sbjct: 93 ---PCKSLWVGGIGPNVSKDD--LEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK 147
Query: 276 EGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKG--------PRSEMFFGDQIRPSQ 327
+ G+ + + F S+ + + GSY G P S F ++PS+
Sbjct: 148 -SMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKPQYPHSYEDFKGDVQPSK 206
Query: 328 LDMLG-PNQSMQPNN---------FAGHLQPADIRGPSMPMRSIG-------------AH 364
+ +G P + Q N+ G ++ R S P R+
Sbjct: 207 VLWIGFPPTATQCNDEQILHNAMILFGEIE----RVKSYPSRNFALVEFRSAEEARQCKE 262
Query: 365 GGHETLLSGPDFKDFHSMQDPNAKNLD--------------PNWRRPS-------PSP-- 401
G L + P K +S + + D PNWRRPS PSP
Sbjct: 263 GLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSEYNDVVGKEPNWRRPSANGTGILPSPTG 322
Query: 402 -GIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGL 460
GI SP QG R+P+ P SW+ YD Q R+SKR R DGS+ F +D+
Sbjct: 323 PGILPSPAQGTRRPMRSNPDSWEGYDPAQLVRESKRTRRDGSV----DGFTPMGVDE--- 375
Query: 461 VLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGG 520
+S+G GS+ P R P DSD IWRG+IAKGG
Sbjct: 376 ---RSFGRGSVAARPI--------------------------RGPPDSDHIWRGMIAKGG 406
Query: 521 TPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASY 580
TPVC ARCVP GKGIE++LPEVVNCSART L+MLAKHYA AIG +IVFF+PD E+DFASY
Sbjct: 407 TPVCCARCVPMGKGIETKLPEVVNCSARTDLNMLAKHYAVAIGCEIVFFVPDREEDFASY 466
Query: 581 TEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQAMV-- 638
TEFLRYL SK+RAGVAK DDGTTLFLVPPSDFL+ VL+V ERLYGVVLKLP A+
Sbjct: 467 TEFLRYLSSKDRAGVAKLDDGTTLFLVPPSDFLTDVLQVTRQERLYGVVLKLPPPAVPVT 526
Query: 639 ----------PPQTVDKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPH 688
P +D+ P +A + L P+E ++ R + + SK P
Sbjct: 527 ASYRQESQSNPLHYMDQARDSPANASHSLYPPRENYI------RGAPEHLTAASK---PS 577
Query: 689 ASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSLIPATKSAEVAPGS----SSA 744
SEPL NNAA QAGV LTPEL+ATL S++PAT S AP S S
Sbjct: 578 VSEPLRI--------PNNAAP--QAGVSLTPELLATLASILPAT-SQPAAPESHQPMSGP 626
Query: 745 RPLLAEPHV--------------------------QSIEQLGNHYNPQAQ--SLTHHYAS 776
+++ H QS +Q GN Y P Q Y
Sbjct: 627 STVVSTAHQSNGLYNGEAPSQAWKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPP 686
Query: 777 MSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSIAPQAAPV-AVSPPVHQQYQ 835
S+ P++++ M+ GN Q Q + ++ Q + + P N+S+ Q + VS P+ QQYQ
Sbjct: 687 ASNNPNYTSGMVHGNMQYQSQSVNMPQLSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQ 746
Query: 836 FAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQVNLSQPQNVMTVSVDKVNLE 895
A S + YG + + + +G + Q N +N SQ Q M DK NLE
Sbjct: 747 PEA-SMPNQNYGPIPSYQQANFHGVTTNQAQN--------LNPSQFQAAMQPPADKANLE 797
Query: 896 HPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLLLQIQQQQQTNS---PAGRG 952
N +LQ ++SG GQGT+DGEVDKNQRYQSTLQFAANLLLQIQQ+QQ S PAG+G
Sbjct: 798 PQNQALRLQPMISGDGQGTTDGEVDKNQRYQSTLQFAANLLLQIQQKQQQQSSGTPAGQG 857
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 15/291 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S+NLWVG+L+ +TT++DL ELFG++G +D++T YSSR FAF+Y++ VE+A AAK+ALQG+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+ G+ IKIE+ARPAKP K LWVGGI VSK++LEE F KFG IEDF+FL++ TAF++
Sbjct: 77 NLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFID 136
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDN 199
Y ++DA +A K++NG+ +GG LRVDFLRSQ ++EQW S+D R+G + N
Sbjct: 137 YYEMDDALQA-KSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNM---------N 186
Query: 200 HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQM--DEQMLHNAMILFGEIERIKSYPS 257
H K +P S D PSK+LW+G+PP+ DEQ+LHNAMILFGEIER+KSYPS
Sbjct: 187 H---KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPS 243
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYS 308
RN++ VEFRS +EAR+ KEGLQGRLFN+PRI IM+S+ EL P +D YS
Sbjct: 244 RNFALVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYS 294
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ A P +LWVG + + + DL+E F KFG ++ R AF+ + ++DA AK
Sbjct: 89 RPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK- 147
Query: 75 ALQGSDFRGNPIKIEFAR---PAK--------------------------------PSKH 99
++ G G+ ++++F R P K PSK
Sbjct: 148 SMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKPQYPHSYEDFKGDVQPSKV 207
Query: 100 LWVG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
LW+G +Q ++ L + FG IE K N A VE+ E+A + + + GR
Sbjct: 208 LWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEARQCKEGLQGR 267
Query: 157 QIGGEQLRVDF 167
++++ +
Sbjct: 268 LFNNPRIKIMY 278
>gi|297743841|emb|CBI36724.3| unnamed protein product [Vitis vinifera]
Length = 510
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/385 (55%), Positives = 260/385 (67%), Gaps = 26/385 (6%)
Query: 1 MAPPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAF 60
MAP R ++ E P S LWVGN+ T++DL +F +FGALD +YSSRSFAF
Sbjct: 1 MAP---LIRRDAENSEVHPFS-LWVGNVGNSVTESDLLAVFSRFGALDCFISYSSRSFAF 56
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLK 120
VYF+R EDA+AA++ALQG G P+KIEFARPAKP K LWVGG S + +K ELE FLK
Sbjct: 57 VYFRRGEDARAAREALQGMVVLGTPMKIEFARPAKPCKSLWVGGFSPSTTKGELENEFLK 116
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
FG IEDFKF D N+A VEY +LEDA++ALK +NG+QIGG +RVDFLR Q SRREQ P
Sbjct: 117 FGKIEDFKFFWDRNSALVEYVKLEDASQALKGLNGKQIGGAMIRVDFLRLQTSRREQGPE 176
Query: 181 SHDARDGPIIGRGTG--------------FSDNHSAYKRSHP-QSSVGRNRDGPPSKILW 225
D RDG R TG +S+ +S KR H QSSV R +G PS +LW
Sbjct: 177 FLDTRDGQFSSRTTGHLNSAWMPQDSIINYSEPYSGSKRQHSSQSSVIRKGEGQPSNVLW 236
Query: 226 VGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
VGYPPS+Q++EQML+NAMILFGEIERIKS+PSR+YSFVEFRS+DEARRAKEGLQGRLFND
Sbjct: 237 VGYPPSIQLEEQMLYNAMILFGEIERIKSFPSRHYSFVEFRSIDEARRAKEGLQGRLFND 296
Query: 286 PRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPNQSMQPNNFAGH 345
PRI+IM+SSS + PGK+Y G R + F +++ +D+ PN M NNF G
Sbjct: 297 PRISIMYSSSGVVPGKEYN---PGIPESRPDTFV-NELPFRHVDVFSPNGPMVSNNFPGP 352
Query: 346 LQPADIRGP---SMPMRSIGAHGGH 367
P+ I S R GAH G+
Sbjct: 353 SPPSGILASNRDSKRSRVDGAHDGN 377
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 116/130 (89%)
Query: 507 DSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDI 566
D ++IWRGIIAKGG VC ARCV KG+ S+LPE+VNCSARTGLD+L KHYAEA+GF++
Sbjct: 375 DGNYIWRGIIAKGGATVCHARCVAIEKGLSSKLPEIVNCSARTGLDLLTKHYAEAVGFEV 434
Query: 567 VFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLY 626
VFFLPDSEDDFASYTEFL YLGSK+RAGVAK DDGTTLFLVPPSDFLSKVLKV GPERLY
Sbjct: 435 VFFLPDSEDDFASYTEFLCYLGSKDRAGVAKLDDGTTLFLVPPSDFLSKVLKVSGPERLY 494
Query: 627 GVVLKLPQQA 636
GVVLKL QQ
Sbjct: 495 GVVLKLAQQT 504
>gi|227204193|dbj|BAH56948.1| AT2G43410 [Arabidopsis thaliana]
Length = 577
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 256/584 (43%), Positives = 319/584 (54%), Gaps = 111/584 (19%)
Query: 397 PSPS-PGIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKI 455
PSP+ PGI SP QG R+P+ P SW+ YD Q R+SKR R DGS +D F +
Sbjct: 37 PSPTGPGILPSPAQGTRRPMRSNPDSWEGYDPAQLVRESKRTRRDGS--VDG--FTPMGV 92
Query: 456 DDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGI 515
D+ +S+G GS+ P R P DSD IWRG+
Sbjct: 93 DE------RSFGRGSVAARPI--------------------------RGPPDSDHIWRGM 120
Query: 516 IAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSED 575
IAKGGTPVC ARCVP GKGIE++LPEVVNCSART L+MLAKHYA AIG +IVFF+PD E+
Sbjct: 121 IAKGGTPVCCARCVPMGKGIETKLPEVVNCSARTDLNMLAKHYAVAIGCEIVFFVPDREE 180
Query: 576 DFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQ 635
DFASYTEFLRYL SK+RAGVAK DDGTTLFLVPPSDFL+ VL+V ERLYGVVLKLP
Sbjct: 181 DFASYTEFLRYLSSKDRAGVAKLDDGTTLFLVPPSDFLTDVLQVTRQERLYGVVLKLPPP 240
Query: 636 AMV------------PPQTVDKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSK 683
A+ P +D+ P +A + L P+E +Y R + + SK
Sbjct: 241 AVPVTASYRQESQSNPLHYMDQARDSPANASHSLYPPRE------NYIRGAPEHLTAASK 294
Query: 684 MHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSLIPATKSAEVAPGS-- 741
P SEPL NNAA QAGV LTPEL+ATL S++PAT S AP S
Sbjct: 295 ---PSVSEPLRI--------PNNAAP--QAGVSLTPELLATLASILPAT-SQPAAPESHQ 340
Query: 742 --SSARPLLAEPHV--------------------------QSIEQLGNHYNPQAQ--SLT 771
S +++ H QS +Q GN Y P Q
Sbjct: 341 PMSGPSTVVSTAHQSNGLYNGEAPSQAWKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPP 400
Query: 772 HHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSIAPQAAPV-AVSPPV 830
Y S+ P++++ M+ GN Q Q + ++ Q + + P N+S+ Q + VS P+
Sbjct: 401 SRYPPASNNPNYTSGMVHGNMQYQSQSVNMPQLSPLPNMPHNNYSMYTQGSSNHPVSQPM 460
Query: 831 HQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQVNLSQPQNVMTVSVD 890
QQYQ A S + YG + + + +G + Q N +N SQ Q M D
Sbjct: 461 VQQYQPEA-SMPNQNYGPIPSYQQANFHGVTTNQAQN--------LNPSQFQAAMQPPAD 511
Query: 891 KVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAAN 934
K NLE N +LQ ++SG GQGT+DGEVDKNQRYQSTLQFAAN
Sbjct: 512 KANLEPQNQALRLQPMISGDGQGTTDGEVDKNQRYQSTLQFAAN 555
>gi|449444608|ref|XP_004140066.1| PREDICTED: uncharacterized protein LOC101216073 [Cucumis sativus]
Length = 898
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 296/602 (49%), Gaps = 61/602 (10%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG ++ V + +L F +FG ++ F + AFV + R EDA A++ + G
Sbjct: 35 PSRHLWVGNLAHVVVERDLSRYFSQFGELDSIAFQPSRSYAFVNFKRDEDAMAAMRELQG 94
Query: 156 RQIGGEQLRVDFLRS-QPSRREQWPNSHDARDGPIIG-RGTGFSDNHSAYKRSHPQSSVG 213
+GG ++++F ++ +PS + + R+ G RG+ H + + +P+ S
Sbjct: 95 FSLGGNPIKIEFTKADKPSASSRDEDYSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKM 154
Query: 214 RNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARR 273
+++ PS++LW+G+P +++DE +L A FGEI++I ++P R Y+FV FR V A R
Sbjct: 155 SDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAWR 214
Query: 274 AKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGP 333
AKE LQG+LF +PR+ I F+ ++ S + PRS F + + D G
Sbjct: 215 AKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSINAPLSPRSPHLFSN-MDSGDFDSRGL 273
Query: 334 NQS----MQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKDF-HSMQDPNAK 388
N+ NN + +I P HG T GP +F P+
Sbjct: 274 NRKSNLWTSGNNVFEMKRSGEISSKLGPSLDRYEHGS-PTKERGPPLNNFPQRFPQPSPF 332
Query: 389 NLDPNWRRPSP------SPGIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRL----- 437
DP W P S ++T P P + + + D Q +R +L
Sbjct: 333 YDDP-WDLPEDMNLYHGSKKLKTGPF-----PQDKELPEYPLSDLEQDKRIIPKLYPDFP 386
Query: 438 -------RVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFV-------NV 483
++ +P+ P R I + SYG S F N
Sbjct: 387 PSETFDKKMKSGLPLGYKQTPDRPI-----TMPVSYGEKSEHWREPYDNFQDPDFLPPND 441
Query: 484 QGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVV 543
R R SP + + + ++ W G IAKGGTPVCRARC P GK ++ LPE +
Sbjct: 442 VARKRFSPDSEQSSV---------KEWKWEGTIAKGGTPVCRARCFPVGKVLDLLLPEFL 492
Query: 544 NCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTT 603
+C+ARTGLDML+KHY EA +VFF+P S+ D Y EF+ YLG K RA V+K DD TT
Sbjct: 493 DCTARTGLDMLSKHYYEAASAWVVFFVPQSDSDIVFYNEFMHYLGEKQRAAVSKLDDRTT 552
Query: 604 LFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQAMV--PP----QTVDKQNIPPPHAEYGL 657
LFLVPPS+F KVLKV G + GVVL+L + + PP +T D N+ P H+E
Sbjct: 553 LFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAIARPPPYQNETKDA-NLLPLHSETLY 611
Query: 658 TR 659
T+
Sbjct: 612 TK 613
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 85/203 (41%), Gaps = 50/203 (24%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNL+ + DL F +FG LD + SRS+AFV FKR EDA AA LQ
Sbjct: 34 PPSRHLWVGNLAHVVVERDLSRYFSQFGELDSIAFQPSRSYAFVNFKRDEDAMAAMRELQ 93
Query: 78 GSDFRGNPIKIEFARPAKPS--------------------------KH------------ 99
G GNPIKIEF + KPS +H
Sbjct: 94 GFSLGGNPIKIEFTKADKPSASSRDEDYSQHREEKYYGARGSFSQGRHVSPDQFYPEKSK 153
Query: 100 -----------LWVGGIS-QTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAA 147
LW+G + V + L + F FG I+ AFV + + A
Sbjct: 154 MSDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAW 213
Query: 148 EALKNINGRQIGGEQLRVDFLRS 170
A + + G+ G ++ + F ++
Sbjct: 214 RAKETLQGKLFGNPRVHICFAKN 236
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 14 DKEAPPSSNLWVGNLSADTTD-ADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
DK PS LW+G + D L++ F FG +DK+TT+ R++AFV F+ V A A
Sbjct: 156 DKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAWRA 215
Query: 73 KDALQGSDFRGNP-IKIEFAR 92
K+ LQG F GNP + I FA+
Sbjct: 216 KETLQGKLF-GNPRVHICFAK 235
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 215 NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
N PPS+ LWVG V + E+ L FGE++ I PSR+Y+FV F+ ++A A
Sbjct: 30 NSSNPPSRHLWVGNLAHVVV-ERDLSRYFSQFGELDSIAFQPSRSYAFVNFKRDEDAMAA 88
Query: 275 KEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPN 334
LQG I I F+ ++ YS R E ++G + SQ + P+
Sbjct: 89 MRELQGFSLGGNPIKIEFTKADKPSASSRDEDYSQH---REEKYYGARGSFSQGRHVSPD 145
Query: 335 Q 335
Q
Sbjct: 146 Q 146
>gi|255567158|ref|XP_002524560.1| RNA binding protein, putative [Ricinus communis]
gi|223536113|gb|EEF37768.1| RNA binding protein, putative [Ricinus communis]
Length = 929
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 300/594 (50%), Gaps = 88/594 (14%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG +S ++ + +L + F++FG ++ F + AF+ + ++A ALK + G
Sbjct: 50 PSRHLWVGNLSHSIMENDLTDHFVRFGELDSVAFQPGRSYAFINFKNDDEAIAALKALQG 109
Query: 156 RQIGGEQLRVDFLR----SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ-- 209
+ G LR++F + S PSR E + D + + +G+ FS S + + P+
Sbjct: 110 FPLAGNPLRIEFAKADKSSVPSRDEDYLQRRDEQRSAM--KGSPFSQRDSRLRAASPEPF 167
Query: 210 ---SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFR 266
S ++ PS++LW+G+P +++DE +L A FG+IE+I +P R+Y+FV FR
Sbjct: 168 YADKSKVSDKSAEPSEVLWIGFPALLKVDEMILRKAFSPFGDIEKITVFPGRSYAFVRFR 227
Query: 267 SVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPS 326
+V A RAKE LQG+LF +PR+ I F+ +E GS + P S F +
Sbjct: 228 NVMSACRAKETLQGKLFGNPRVHICFARNE-------GGSSGSGRTPLSPHFKSN----- 275
Query: 327 QLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPDFKDFHSMQDPN 386
G +++ + + G+L +D R PS+ + ++ A ++ + G K SM P+
Sbjct: 276 --GHPGASENFRQDRTFGNLT-SDSRSPSL-ISNLDA----DSDVYGSKRK---SMLHPS 324
Query: 387 AKNLDPNWR-----RPSP-------SPGIRTSP----TQGIRQPLNHAPGSWDVYDANQF 430
N +WR RP P SP R S + + Q + WD+ + +
Sbjct: 325 GSNTFDDWRFGEELRPPPDVYECHGSPRERGSHFDEFSLKLPQKASLYEEPWDLPEESYL 384
Query: 431 QRDSKRLRVDGSMP---IDDATFPSRKIDDHGL-----------VLDQSYGLGSITGGPA 476
+K+L+ +P + + F + + H V D++YG + P
Sbjct: 385 FHGAKKLKTGSFLPDKELPEYPFSDLEQEKHAFPRAFSEFPQPEVFDKNYGYKPNSDRPT 444
Query: 477 ----------SGAFVNVQGRNRLSPVASKVTAG-----GFGRNPIDSD---FIWRGIIAK 518
++ N Q PV++ V + F P S + W G IAK
Sbjct: 445 LPHGERTDHWKASYDNFQ------PVSATVLSNPGVRKRFSPEPEPSSLRLWKWEGTIAK 498
Query: 519 GGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFA 578
GGTPVC AR P GK ++ LPE ++C+ARTGLDMLAKHY +A +VFF P S+ D
Sbjct: 499 GGTPVCHARGFPVGKALDIMLPEFLDCTARTGLDMLAKHYYQAASAWVVFFAPASDADIG 558
Query: 579 SYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKL 632
Y EF+ YLG K RA VAK DD TTLFLVPPSDF KVL+V G + GVVL+L
Sbjct: 559 YYNEFMHYLGEKQRAAVAKLDDKTTLFLVPPSDFSEKVLRVPGKLCISGVVLRL 612
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNLS + DL + F +FG LD V RS+AF+ FK ++A AA ALQ
Sbjct: 49 PPSRHLWVGNLSHSIMENDLTDHFVRFGELDSVAFQPGRSYAFINFKNDDEAIAALKALQ 108
Query: 78 GSDFRGNPIKIEFARPAKPS 97
G GNP++IEFA+ K S
Sbjct: 109 GFPLAGNPLRIEFAKADKSS 128
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 14 DKEAPPSSNLWVGNLSADTTDA-DLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
DK A PS LW+G + D L++ F FG ++K+T + RS+AFV F+ V A A
Sbjct: 176 DKSAEPSEVLWIGFPALLKVDEMILRKAFSPFGDIEKITVFPGRSYAFVRFRNVMSACRA 235
Query: 73 KDALQGSDFRGNP-IKIEFAR 92
K+ LQG F GNP + I FAR
Sbjct: 236 KETLQGKLF-GNPRVHICFAR 255
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 219 PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGL 278
PPS+ LWVG S + E L + + FGE++ + P R+Y+F+ F++ DEA A + L
Sbjct: 49 PPSRHLWVGN-LSHSIMENDLTDHFVRFGELDSVAFQPGRSYAFINFKNDDEAIAALKAL 107
Query: 279 QG 280
QG
Sbjct: 108 QG 109
>gi|326533042|dbj|BAJ93493.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 854
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 284/935 (30%), Positives = 413/935 (44%), Gaps = 189/935 (20%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT--AFVEYSRLEDAAEALK 151
A + LWVG + ++++ F G + D ++ G+ AFV + ++++ AL+
Sbjct: 36 AHETNTLWVGNLPTHAGEDDVMAAFAPHGAL-DCVVMRAGSRSYAFVLFRSVDESRAALE 94
Query: 152 NINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSS 211
+ G ++ G +RV+F R P +
Sbjct: 95 ALRGSKVKGLPIRVEFGR--------------------------------------PARA 116
Query: 212 VGRNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDE 270
V RN LWVG PS+ +Q + + FG+IE I + ++++F +++
Sbjct: 117 V-RN--------LWVGGISPSI--SKQEVEDEFQKFGKIEGIAFSHDQTSAYIDFEKLED 165
Query: 271 ARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKG-PRSEMFFGDQIRPSQLD 329
A A L G + + F S + G+++G P EM G + +
Sbjct: 166 AISAHRALNGTDLGGKELCVDFQRSRGRVERSEAGNFNGRGSLPPGEMGVGHAKGSAGVR 225
Query: 330 MLGPNQSMQPNN--FAGHLQPADIRGPSMPMRSIGAHGGHETLLSGPD----FKDFHSMQ 383
M ++ P N + G + ++ R++ AHG + P+ F +F +++
Sbjct: 226 M---REAKNPTNVLWVGLPNTHKVNEETL-RRAMAAHGVVTNVKVFPERQYAFVEFATIE 281
Query: 384 DP-NAKNL-------DPNWRRPSPSPGIRTSPTQGIRQPLNHAPGSWDVYDANQFQRD-- 433
NAKNL D S G+ S + P P S +D+ D
Sbjct: 282 GASNAKNLLDGRLFNDTRIHVLFSSSGLGPSKLDNLTPPAGF-PRSEIYHDSPYAAPDYF 340
Query: 434 -SKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGG----PASGAFVNV--QGR 486
+ R S D SR +D YG +TGG P +G+ V
Sbjct: 341 GAGRSSYGTSQGYDPRRGRSRYLD---------YGAMPVTGGILPAPEAGSSVLTGHSAH 391
Query: 487 NRLSPVASK------------VTAGGFGRNPIDSDFI-------------------WRGI 515
N L P +K V AG G P+ + + WRG
Sbjct: 392 NALDPREAKRVRLNAGMDPYHVRAGSEGLQPVADESLSSVIRIQGMVHQTSCLGHFWRGS 451
Query: 516 IAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSED 575
IAKGG+ VCRARC+ +G+E LP++VN SARTGLDMLAKHY +A GF+IVFFLPDSED
Sbjct: 452 IAKGGSLVCRARCLSIRRGVEIPLPDIVNISARTGLDMLAKHYGDASGFEIVFFLPDSED 511
Query: 576 DFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQ 635
DF SYTEFLRYLGSK+RAGV K D GTTLFLVPPSDFL+ VL+V GPERLYGVVL +PQ
Sbjct: 512 DFVSYTEFLRYLGSKSRAGVVKVDAGTTLFLVPPSDFLTNVLQVDGPERLYGVVLHIPQM 571
Query: 636 AMVPPQTVDKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIA 695
+ V + + P ++ + +YN S +D+ Q + E +
Sbjct: 572 SNA---AVQRPVLTGPESQAYYDGSDTMLAMQRNYNMGSANDNHHQDADYRRSLREEAVQ 628
Query: 696 HSSSMDYGSNNAAAISQAGVKLTPELIATLTSLIPATKSAEVAPGSSSARPLLAEPHVQS 755
S S A Q G L P+++ T+ L+P +S + A V +
Sbjct: 629 SGVSSFPMSQIAG---QQGQSLNPDIMTTIAKLMPNVQST-----------VPANSQVGN 674
Query: 756 IEQLGNHYNPQ-AQSLTHHYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPN 814
++Q G + Q A S + P+H+A E T SL + ++
Sbjct: 675 LQQSGQQFGRQAAASYGGMVGAQEQHPTHTAYN-------PEVTLSLPPPPPLPTQ---- 723
Query: 815 FSIAPQAAPVAVSPPVH--QQYQ---FAAPSNSQKGYGMMQGTEASTLYGSSVF------ 863
APV P +H QQYQ + AP N+ YG + S L S+
Sbjct: 724 -------APV---PALHTQQQYQPEHYYAPQNN---YGSLGTAGQSNLQASNANLPGPPP 770
Query: 864 -QQPNNPTAVSNQV-NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDK 921
Q N P A +NQ NL+Q M+ D+V+ + + VQQ Q+V SG+ Q EVDK
Sbjct: 771 PQLNNGPLAANNQTGNLAQLHQSMSFPTDRVSPDFSSQVQQQQNVASGSAQAPD--EVDK 828
Query: 922 NQRYQSTLQFAANLLLQIQQQQQTNSPAGRGTGNQ 956
N++YQ+TLQFA NLLLQ+Q RG+GNQ
Sbjct: 829 NKKYQATLQFAHNLLLQLQ----------RGSGNQ 853
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 182/303 (60%), Gaps = 13/303 (4%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-SRSFAF 60
A PP + A A ++ LWVGNL + D+ F GALD V + SRS+AF
Sbjct: 21 ASPPKESEPAAAPGAAHETNTLWVGNLPTHAGEDDVMAAFAPHGALDCVVMRAGSRSYAF 80
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLK 120
V F+ V++++AA +AL+GS +G PI++EF RPA+ ++LWVGGIS ++SK+E+E+ F K
Sbjct: 81 VLFRSVDESRAALEALRGSKVKGLPIRVEFGRPARAVRNLWVGGISPSISKQEVEDEFQK 140
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
FG IE F D +A++++ +LEDA A + +NG +GG++L VDF RS+ R E+
Sbjct: 141 FGKIEGIAFSHDQTSAYIDFEKLEDAISAHRALNGTDLGGKELCVDFQRSR-GRVER--- 196
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG-RNRDGP-PSKILWVGYPPSVQMDEQM 238
+ G GRG S H + S G R R+ P+ +LWVG P + +++E+
Sbjct: 197 ---SEAGNFNGRG---SLPPGEMGVGHAKGSAGVRMREAKNPTNVLWVGLPNTHKVNEET 250
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELA 298
L AM G + +K +P R Y+FVEF +++ A AK L GRLFND RI ++FSSS L
Sbjct: 251 LRRAMAAHGVVTNVKVFPERQYAFVEFATIEGASNAKNLLDGRLFNDTRIHVLFSSSGLG 310
Query: 299 PGK 301
P K
Sbjct: 311 PSK 313
>gi|414886318|tpg|DAA62332.1| TPA: hypothetical protein ZEAMMB73_716132 [Zea mays]
Length = 915
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 183/483 (37%), Positives = 250/483 (51%), Gaps = 88/483 (18%)
Query: 509 DFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVF 568
+ WRG IAKGG+PVCRARC+P KG + LP+V+NCSARTGLDMLAKHYA+A GFDIVF
Sbjct: 438 EHCWRGSIAKGGSPVCRARCLPITKGSDIPLPDVMNCSARTGLDMLAKHYADATGFDIVF 497
Query: 569 FLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGV 628
FLPDSEDDF SYTEFLRYLGSK+RAGV K D GTTLFLVPPSDFL+ VL+V GPERLYGV
Sbjct: 498 FLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDAGTTLFLVPPSDFLTNVLQVDGPERLYGV 557
Query: 629 VLKLPQ---QAMVPPQTV---------DKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHD 676
VL +PQ A + PQ ++ +P +Y + P + L DY H+
Sbjct: 558 VLHIPQISAAAALRPQLTGTEQQPYYDERGTLPTSQRKYSIISPNDSGHLDADYRTSLHE 617
Query: 677 DSKVQSKMHFP--------HASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSL 728
DS + H P A +P +A + +N AA + Q L P+++ATL L
Sbjct: 618 DS-MHRLGHIPGRPRVDEGQAVQPALA-----GFPANQAAGL-QVQSSLKPDIMATLAKL 670
Query: 729 IPATKSAEVAPGSSSARPLLAEPHVQSIEQLGNHYNPQAQSLTHH--YASMSSTPSHSAQ 786
+P+ +S+ + G +A + +Q L +NP+ Q + + M++ H Q
Sbjct: 671 LPSVQSSPLVSGQMNA--IDRTSQIQDPSMLSKVWNPENQVTASNSSFGQMANV-QHPGQ 727
Query: 787 MLLGNNQLQESTASLSQQGMVYS---RPLPNFSIAPQAA--------------------- 822
G Q S A L+ G + S R + + + P+
Sbjct: 728 QFSG----QASAAHLTNYGNMVSAQERSIQHTAYNPEVTLNLPPPPPLPTIPHSSATLQS 783
Query: 823 ------PVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQV 876
P + ++Q Q+ P N+ YG + S L S+ NNPT QV
Sbjct: 784 QGGHSLPSQTNQQLYQPEQYYVPQNN---YGPLVPVSHSNLQISNT----NNPTLTIPQV 836
Query: 877 -----------NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRY 925
NL+QPQ+ M + VD+ + + + QQ Q+ GA Q E DK+++Y
Sbjct: 837 NPGPPTNNQIGNLAQPQHSMPLHVDRASQDFSSQGQQ-QNRGPGAAQAP---EEDKSKKY 892
Query: 926 QST 928
Q+T
Sbjct: 893 QAT 895
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 200/313 (63%), Gaps = 23/313 (7%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALD-KVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+P ++ LWVGNL + T+ DL LFG GALD + SRS+AFV F+ +A+ A +A
Sbjct: 36 SPETNTLWVGNLPSHVTEGDLLALFGPHGALDCALARAGSRSYAFVLFRSPAEAREAVEA 95
Query: 76 LQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT 135
+G +G ++ EFARPA+ ++LWVGGIS ++SKEELE FLKFG +E F +D +
Sbjct: 96 TRGEKVKGAAMRTEFARPARAVRNLWVGGISPSISKEELEGEFLKFGKVEGVAFSQDQTS 155
Query: 136 AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW--PNSHDAR-DGPI-IG 191
A++++ +LEDA A +++NG+ +GG++L VDF RS+ R +W +S + R GP+
Sbjct: 156 AYIDFEKLEDAISAHRSLNGKMLGGKELCVDFQRSK--GRAEWSEASSFNGRVPGPVGDK 213
Query: 192 RGTGFSDNHSAYKRSHPQSSVG-RNRDGPPSKILWVGYPPSVQ-MDEQMLHNAMILFGEI 249
RG+G +SS G R R+ P+ +LWVG+P S + +DE+ L +AM +FG +
Sbjct: 214 RGSG-----------PLKSSAGVRMREAQPTNVLWVGFPGSYRVIDEEALKHAMSVFGVV 262
Query: 250 ERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK-DYPGSYS 308
+IK + +R Y+FVEF +V EA AK L G LFNDPRI I+FS+S LAP K D P S +
Sbjct: 263 TKIKVFQTRQYAFVEFANVAEACNAKMNLDGHLFNDPRIQILFSNSGLAPNKLDNPTSVA 322
Query: 309 GTKGPRSEMFFGD 321
G P SE++ D
Sbjct: 323 GF--PSSEIYSSD 333
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVG-NLSADTTDAD-LKELFGKFGALDKVTTYSSRSFAFVY 62
P K + +EA P++ LWVG S D + LK FG + K+ + +R +AFV
Sbjct: 218 PLKSSAGVRMREAQPTNVLWVGFPGSYRVIDEEALKHAMSVFGVVTKIKVFQTRQYAFVE 277
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFA 91
F V +A AK L G F I+I F+
Sbjct: 278 FANVAEACNAKMNLDGHLFNDPRIQILFS 306
>gi|414886317|tpg|DAA62331.1| TPA: hypothetical protein ZEAMMB73_716132 [Zea mays]
Length = 947
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 183/483 (37%), Positives = 250/483 (51%), Gaps = 88/483 (18%)
Query: 509 DFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVF 568
+ WRG IAKGG+PVCRARC+P KG + LP+V+NCSARTGLDMLAKHYA+A GFDIVF
Sbjct: 470 EHCWRGSIAKGGSPVCRARCLPITKGSDIPLPDVMNCSARTGLDMLAKHYADATGFDIVF 529
Query: 569 FLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGV 628
FLPDSEDDF SYTEFLRYLGSK+RAGV K D GTTLFLVPPSDFL+ VL+V GPERLYGV
Sbjct: 530 FLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDAGTTLFLVPPSDFLTNVLQVDGPERLYGV 589
Query: 629 VLKLPQ---QAMVPPQTV---------DKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHD 676
VL +PQ A + PQ ++ +P +Y + P + L DY H+
Sbjct: 590 VLHIPQISAAAALRPQLTGTEQQPYYDERGTLPTSQRKYSIISPNDSGHLDADYRTSLHE 649
Query: 677 DSKVQSKMHFP--------HASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSL 728
DS + H P A +P +A + +N AA + Q L P+++ATL L
Sbjct: 650 DS-MHRLGHIPGRPRVDEGQAVQPALA-----GFPANQAAGL-QVQSSLKPDIMATLAKL 702
Query: 729 IPATKSAEVAPGSSSARPLLAEPHVQSIEQLGNHYNPQAQSLTHH--YASMSSTPSHSAQ 786
+P+ +S+ + G +A + +Q L +NP+ Q + + M++ H Q
Sbjct: 703 LPSVQSSPLVSGQMNA--IDRTSQIQDPSMLSKVWNPENQVTASNSSFGQMANV-QHPGQ 759
Query: 787 MLLGNNQLQESTASLSQQGMVYS---RPLPNFSIAPQAA--------------------- 822
G Q S A L+ G + S R + + + P+
Sbjct: 760 QFSG----QASAAHLTNYGNMVSAQERSIQHTAYNPEVTLNLPPPPPLPTIPHSSATLQS 815
Query: 823 ------PVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQV 876
P + ++Q Q+ P N+ YG + S L S+ NNPT QV
Sbjct: 816 QGGHSLPSQTNQQLYQPEQYYVPQNN---YGPLVPVSHSNLQISNT----NNPTLTIPQV 868
Query: 877 -----------NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRY 925
NL+QPQ+ M + VD+ + + + QQ Q+ GA Q E DK+++Y
Sbjct: 869 NPGPPTNNQIGNLAQPQHSMPLHVDRASQDFSSQGQQ-QNRGPGAAQAP---EEDKSKKY 924
Query: 926 QST 928
Q+T
Sbjct: 925 QAT 927
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 200/345 (57%), Gaps = 55/345 (15%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALD-KVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+P ++ LWVGNL + T+ DL LFG GALD + SRS+AFV F+ +A+ A +A
Sbjct: 36 SPETNTLWVGNLPSHVTEGDLLALFGPHGALDCALARAGSRSYAFVLFRSPAEAREAVEA 95
Query: 76 LQGSDFRGNPIKIEFARP--------------------------------AKPSKHLWVG 103
+G +G ++ EFARP A+ ++LWVG
Sbjct: 96 TRGEKVKGAAMRTEFARPVFVVADENATRTVLVEDTGRMPCLSIVNLADQARAVRNLWVG 155
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
GIS ++SKEELE FLKFG +E F +D +A++++ +LEDA A +++NG+ +GG++L
Sbjct: 156 GISPSISKEELEGEFLKFGKVEGVAFSQDQTSAYIDFEKLEDAISAHRSLNGKMLGGKEL 215
Query: 164 RVDFLRSQPSRREQW--PNSHDAR-DGPI-IGRGTGFSDNHSAYKRSHPQSSVG-RNRDG 218
VDF RS+ R +W +S + R GP+ RG+G +SS G R R+
Sbjct: 216 CVDFQRSK--GRAEWSEASSFNGRVPGPVGDKRGSG-----------PLKSSAGVRMREA 262
Query: 219 PPSKILWVGYPPSVQ-MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEG 277
P+ +LWVG+P S + +DE+ L +AM +FG + +IK + +R Y+FVEF +V EA AK
Sbjct: 263 QPTNVLWVGFPGSYRVIDEEALKHAMSVFGVVTKIKVFQTRQYAFVEFANVAEACNAKMN 322
Query: 278 LQGRLFNDPRITIMFSSSELAPGK-DYPGSYSGTKGPRSEMFFGD 321
L G LFNDPRI I+FS+S LAP K D P S +G P SE++ D
Sbjct: 323 LDGHLFNDPRIQILFSNSGLAPNKLDNPTSVAGF--PSSEIYSSD 365
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVG-NLSADTTDAD-LKELFGKFGALDKVTTYSSRSFAFVY 62
P K + +EA P++ LWVG S D + LK FG + K+ + +R +AFV
Sbjct: 250 PLKSSAGVRMREAQPTNVLWVGFPGSYRVIDEEALKHAMSVFGVVTKIKVFQTRQYAFVE 309
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFA 91
F V +A AK L G F I+I F+
Sbjct: 310 FANVAEACNAKMNLDGHLFNDPRIQILFS 338
>gi|242049838|ref|XP_002462663.1| hypothetical protein SORBIDRAFT_02g029880 [Sorghum bicolor]
gi|241926040|gb|EER99184.1| hypothetical protein SORBIDRAFT_02g029880 [Sorghum bicolor]
Length = 918
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 250/476 (52%), Gaps = 75/476 (15%)
Query: 509 DFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVF 568
D WRG IAKGG+PVCRARC+P KG + LP+V+NCSARTGLDMLAKHYA+A GFDIVF
Sbjct: 442 DHCWRGSIAKGGSPVCRARCLPITKGSDIPLPDVMNCSARTGLDMLAKHYADATGFDIVF 501
Query: 569 FLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGV 628
FLPDSEDDF SYTEFLRYLGSK+RAGV K D TTLFLVPPSDFL+ VL+V GPERLYGV
Sbjct: 502 FLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDAATTLFLVPPSDFLTNVLQVDGPERLYGV 561
Query: 629 VLKLPQ----QAMVPPQTV--------DKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHD 676
VL +PQ A + PQ D++ P +Y + P L DY H+
Sbjct: 562 VLHIPQISAAAAALRPQLTGTEQQPYYDERETLPTQRKYSIISPNGSGHLDADYRASLHE 621
Query: 677 DSKVQSKMHFP--------HASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSL 728
DS +Q H P A +P +A + +N A + Q L P+++ATL L
Sbjct: 622 DS-MQRLGHIPGRPRVDEGQAVQPALA-----GFPANQATGL-QVQSSLKPDIMATLAKL 674
Query: 729 IPATKSAEVAPGSSSA--RP-LLAEP---------------------HVQSIEQLGNHYN 764
+P+ +S+++ G +A RP + +P + +++ G ++
Sbjct: 675 LPSVQSSQLVSGQMNAIERPSQMQDPSMLSKVWTPENQVTASNSSFGQIANVQHPGQQFS 734
Query: 765 PQAQSLTH--HYASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSIAPQAA 822
QA S H +Y +M S S Q N ++ + R S +
Sbjct: 735 KQA-SAAHLTNYGNMVSAQERSIQHTAYNPEVALNLPPPPPLPTEPHRSATLPSQGGHSL 793
Query: 823 PVAVSPPVHQQYQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAV---------S 873
P ++ ++Q + P Q YG + S L S+ NNPT +
Sbjct: 794 PTQINHQLYQPEHYYVP---QSNYGPLAPASHSNLQISNT----NNPTPAIPQVNPGPPT 846
Query: 874 NQV-NLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQST 928
NQ+ NL+Q Q+ M + VD+ + + + +QQ Q++ GA Q E DK+++YQ+T
Sbjct: 847 NQIGNLAQLQHSMPLHVDRASQDFSSQLQQ-QNLGPGAAQAP---EEDKSKKYQAT 898
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 194/312 (62%), Gaps = 23/312 (7%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALD-KVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
P ++ LWVGNL T+ DL LFG GALD + SRS+AF+ F+ +A+AA +A
Sbjct: 41 PETNTLWVGNLPLHVTEGDLLALFGPHGALDCALARAGSRSYAFLLFRSPAEARAAVEAT 100
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
+G +G ++ EFARPAK ++LWVG IS +VSKEELEE F KFG +E F +D +A
Sbjct: 101 RGEKVKGAAMRTEFARPAKAVRNLWVGSISPSVSKEELEEEFQKFGKVEGVAFSQDQTSA 160
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN--SHDARDGPIIG--R 192
++++ +LEDA A +++NG+ +GG++L VDF RS+ R +W + S + R +G R
Sbjct: 161 YIDFEKLEDAISAHRSLNGKTLGGKELCVDFQRSK--GRAEWSDASSFNGRVSGPVGDKR 218
Query: 193 GTGFSDNHSAYKRSHPQSSVG-RNRDGPPSKILWVGYPPSVQ-MDEQMLHNAMILFGEIE 250
G+G P+ S G R R+ P+ +LWVG+P S + + E L AM FG +
Sbjct: 219 GSG-----------PPKGSAGIRMREAQPTNVLWVGFPGSYKAISEDTLKQAMSAFGVVT 267
Query: 251 RIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK-DYPGSYSG 309
IK + +R Y+FVEF +V EA AK L G LFNDPRI I+FS+SELAP K D P S +G
Sbjct: 268 NIKIFQTRQYAFVEFANVAEAYNAKMNLDGHLFNDPRIQILFSNSELAPNKLDNPTSVAG 327
Query: 310 TKGPRSEMFFGD 321
PRSEM+ D
Sbjct: 328 F--PRSEMYSSD 337
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 53/226 (23%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
NLWVG++S + +L+E F KFG ++ V ++ A++ F+++EDA +A +L G
Sbjct: 123 NLWVGSISPSVSKEELEEEFQKFGKVEGVAFSQDQTSAYIDFEKLEDAISAHRSLNGKTL 182
Query: 82 RGNPIKIEF---------------------------------------ARPAKPSKHLWV 102
G + ++F R A+P+ LWV
Sbjct: 183 GGKELCVDFQRSKGRAEWSDASSFNGRVSGPVGDKRGSGPPKGSAGIRMREAQPTNVLWV 242
Query: 103 G--GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG 160
G G + +S++ L++ FG + + K + AFVE++ + +A A N++G
Sbjct: 243 GFPGSYKAISEDTLKQAMSAFGVVTNIKIFQTRQYAFVEFANVAEAYNAKMNLDGHLFND 302
Query: 161 EQLRVDFLRSQ--------PSRREQWPNSH----DARDGPIIGRGT 194
++++ F S+ P+ +P S D+R GP +G GT
Sbjct: 303 PRIQILFSNSELAPNKLDNPTSVAGFPRSEMYSSDSRQGPGVGSGT 348
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 15 KEAPPSSNLWVG------NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVED 68
+EA P++ LWVG +S DT LK+ FG + + + +R +AFV F V +
Sbjct: 232 REAQPTNVLWVGFPGSYKAISEDT----LKQAMSAFGVVTNIKIFQTRQYAFVEFANVAE 287
Query: 69 AKAAKDALQGSDFRGNPIKIEFA 91
A AK L G F I+I F+
Sbjct: 288 AYNAKMNLDGHLFNDPRIQILFS 310
>gi|218202458|gb|EEC84885.1| hypothetical protein OsI_32043 [Oryza sativa Indica Group]
Length = 900
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 195/308 (63%), Gaps = 27/308 (8%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-RSFAFVYFKRVEDAKAAKDAL 76
P ++ LWVGNL A + D+ F GALD V + RS+AFV F+ V +A+AA DAL
Sbjct: 43 PETNTLWVGNLPAQAAEDDVMAAFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDAL 102
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
QGS +G+ +++EFARPA+ K+LWVGGIS ++SKEELEE F KFG ++ F +D +A
Sbjct: 103 QGSKVKGSVVRLEFARPARAVKNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSA 162
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW--PNSHDARDGPIIGRGT 194
++++ +LEDA A + +NGR +GG++L VDF RS+ R +W S + R GP G G
Sbjct: 163 YIDFDKLEDAISAHRALNGRVLGGQELCVDFQRSRG--RAEWLETGSFNGRTGPAKGYGV 220
Query: 195 GFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKS 254
RNR+ P+ +LWVG+P + +++E+ L AM + G + K
Sbjct: 221 -------------------RNRESNPTNVLWVGFPNTAKINEEALRQAMAVHGAVTNTKV 261
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK-DYPGSYSGTKGP 313
+P+R Y+FVEF +V EA AK+ L GRLFND RI I+FS+SELAP K D P + SG P
Sbjct: 262 FPTRQYAFVEFATVGEASNAKKNLDGRLFNDQRIQILFSNSELAPNKLDNPTAVSGF--P 319
Query: 314 RSEMFFGD 321
+SEM++ D
Sbjct: 320 KSEMYYDD 327
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 173/291 (59%), Gaps = 39/291 (13%)
Query: 509 DFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVF 568
+ WRG IAKGG+PVCRARC+P KG+E LP+VVNCSARTGLDMLAKHY +A GFDIVF
Sbjct: 437 EHFWRGSIAKGGSPVCRARCLPIRKGVEIPLPDVVNCSARTGLDMLAKHYRDASGFDIVF 496
Query: 569 FLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGV 628
FLPDSEDDF SYTEFLRYLGSK+RAGV K D GTTLFLVPPSDFL VL+V GPERLYGV
Sbjct: 497 FLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDGGTTLFLVPPSDFLRNVLQVDGPERLYGV 556
Query: 629 VLKLPQQA----------------MVPPQT---VDKQNIPPPHAEYGLTRPKEEHVLPVD 669
VL +PQ + + P++ D++ I P Y + P H D
Sbjct: 557 VLHIPQMSAAAPASAPTPAVQRPQLTAPESQPFYDEREI-PLQRRYSMITPSNNHHRDAD 615
Query: 670 YNRFSHDDS--KVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVK----LTPELIA 723
+ +DS ++ + P E + N A + AG++ L P++IA
Sbjct: 616 HRGSLREDSLHQLGQILARPRVDEGQVVQ-------PNLAGIPTNAGLQVQPSLQPDMIA 668
Query: 724 TLTSLIPATKSAEVAPG----SSSARPLLAEPHVQSIEQLGNHYNPQAQSL 770
TL L+P+ +S+ + G SS+ RP L + + L + P+ Q++
Sbjct: 669 TLAKLLPSGQSSALVTGQLPLSSTDRPALTQ--MNDASTLAKVWRPENQAM 717
>gi|421994878|emb|CCM44540.1| spen-like protein [Oryza sativa Japonica Group x Oryza sativa
Indica Group]
Length = 900
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 195/308 (63%), Gaps = 27/308 (8%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-RSFAFVYFKRVEDAKAAKDAL 76
P ++ LWVGNL A + D+ F GALD V + RS+AFV F+ V +A+AA DAL
Sbjct: 43 PETNTLWVGNLPAQAAEDDVMASFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDAL 102
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
QGS +G+ +++EFARPA+ K+LWVGGIS ++SKEELEE F KFG ++ F +D +A
Sbjct: 103 QGSKVKGSVVRLEFARPARAVKNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSA 162
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW--PNSHDARDGPIIGRGT 194
++++ +LEDA A + +NGR +GG++L VDF RS+ R +W S + R GP G G
Sbjct: 163 YIDFDKLEDAISAHRALNGRVLGGQELCVDFQRSRG--RAEWLETGSFNGRTGPAKGYGV 220
Query: 195 GFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKS 254
RNR+ P+ +LWVG+P + +++E+ L AM + G + K
Sbjct: 221 -------------------RNRESNPTNVLWVGFPNTAKINEEALRQAMAVHGAVTNTKV 261
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK-DYPGSYSGTKGP 313
+P+R Y+FVEF +V EA AK+ L GRLFND RI I+FS+SELAP K D P + SG P
Sbjct: 262 FPTRQYAFVEFATVGEASNAKKNLDGRLFNDQRIQILFSNSELAPNKLDNPTAVSGF--P 319
Query: 314 RSEMFFGD 321
+SEM++ D
Sbjct: 320 KSEMYYDD 327
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 173/291 (59%), Gaps = 39/291 (13%)
Query: 509 DFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVF 568
+ WRG IAKGG+PVCRARC+P KG+E LP+VVNCSARTGLDMLAKHY +A GFDIVF
Sbjct: 437 EHFWRGSIAKGGSPVCRARCLPIRKGVEIPLPDVVNCSARTGLDMLAKHYRDASGFDIVF 496
Query: 569 FLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGV 628
FLPDSEDDF SYTEFLRYLGSK+RAGV K D GTTLFLVPPSDFL VL+V GPERLYGV
Sbjct: 497 FLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDGGTTLFLVPPSDFLRNVLQVDGPERLYGV 556
Query: 629 VLKLPQQA----------------MVPPQT---VDKQNIPPPHAEYGLTRPKEEHVLPVD 669
VL +PQ + + P++ D++ I P Y + P H D
Sbjct: 557 VLHIPQMSAAAPASAPTPAVQRPQLTAPESQPYYDEREI-PLQRRYSMITPSNNHHRDAD 615
Query: 670 YNRFSHDDS--KVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVK----LTPELIA 723
+ +DS ++ + P E + N A + AG++ L P++IA
Sbjct: 616 HRGSLREDSLHQLGQILARPRVDEGQVVQ-------PNLAGIPTNAGLQVQPSLQPDMIA 668
Query: 724 TLTSLIPATKSAEVAPG----SSSARPLLAEPHVQSIEQLGNHYNPQAQSL 770
TL L+P+ +S+ + G SS+ +P L + + L + P+ Q++
Sbjct: 669 TLAKLLPSGQSSALVTGQLPLSSTDQPALTQ--MNDASTLAKVWRPENQAM 717
>gi|115480155|ref|NP_001063671.1| Os09g0516300 [Oryza sativa Japonica Group]
gi|50725369|dbj|BAD34441.1| unknown protein [Oryza sativa Japonica Group]
gi|50726245|dbj|BAD33821.1| unknown protein [Oryza sativa Japonica Group]
gi|113631904|dbj|BAF25585.1| Os09g0516300 [Oryza sativa Japonica Group]
gi|215694475|dbj|BAG89424.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 900
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 195/308 (63%), Gaps = 27/308 (8%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-RSFAFVYFKRVEDAKAAKDAL 76
P ++ LWVGNL A + D+ F GALD V + RS+AFV F+ V +A+AA DAL
Sbjct: 43 PETNTLWVGNLPAQAAEDDVMASFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDAL 102
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
QGS +G+ +++EFARPA+ K+LWVGGIS ++SKEELEE F KFG ++ F +D +A
Sbjct: 103 QGSKVKGSVVRLEFARPARAVKNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSA 162
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW--PNSHDARDGPIIGRGT 194
++++ +LEDA A + +NGR +GG++L VDF RS+ R +W S + R GP G G
Sbjct: 163 YIDFDKLEDAISAHRALNGRVLGGQELCVDFQRSRG--RAEWLETGSFNGRTGPAKGYGV 220
Query: 195 GFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKS 254
RNR+ P+ +LWVG+P + +++E+ L AM + G + K
Sbjct: 221 -------------------RNRESNPTNVLWVGFPNTAKINEEALRQAMAVHGAVTNTKV 261
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK-DYPGSYSGTKGP 313
+P+R Y+FVEF +V EA AK+ L GRLFND RI I+FS+SELAP K D P + SG P
Sbjct: 262 FPTRQYAFVEFATVGEASNAKKNLDGRLFNDQRIQILFSNSELAPNKLDNPTAVSGF--P 319
Query: 314 RSEMFFGD 321
+SEM++ D
Sbjct: 320 KSEMYYDD 327
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 192/337 (56%), Gaps = 55/337 (16%)
Query: 509 DFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVF 568
+ WRG IAKGG+PVCRARC+P KG+E LP+VVNCSARTGLDMLAKHY +A GFDIVF
Sbjct: 437 EHFWRGSIAKGGSPVCRARCLPIRKGVEIPLPDVVNCSARTGLDMLAKHYRDASGFDIVF 496
Query: 569 FLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGV 628
FLPDSEDDF SYTEFLRYLGSK+RAGV K D GTTLFLVPPSDFL VL+V GPERLYGV
Sbjct: 497 FLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDGGTTLFLVPPSDFLRNVLQVDGPERLYGV 556
Query: 629 VLKLPQQA----------------MVPPQT---VDKQNIPPPHAEYGLTRPKEEHVLPVD 669
VL +PQ + + P++ D++ I P Y + P H D
Sbjct: 557 VLHIPQMSAAAPASAPTPAVQRPQLTAPESQPYYDEREI-PLQRRYSMITPSNNHHRDAD 615
Query: 670 YNRFSHDDS--KVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVK----LTPELIA 723
+ +DS ++ + P E + N A + AG++ L P++IA
Sbjct: 616 HRGSLREDSLHQLGQILARPRVDEGQVVQ-------PNLAGIPTNAGLQVQPSLQPDMIA 668
Query: 724 TLTSLIPATKSAEVAPG----SSSARPLLAEPHVQSIEQLGNHYNPQAQSLTHHYASMSS 779
TL L+P+ +S+ + G SS+ +P L + + L + P+ Q++ AS SS
Sbjct: 669 TLAKLLPSGQSSALVTGQLPLSSTDQPALTQ--MNDASTLAKVWRPENQAM----ASTSS 722
Query: 780 TPSHSAQMLLGNNQLQESTASLSQQ-GMVYSRPLPNF 815
+GN Q S S+Q G V+ LPN+
Sbjct: 723 LEQ------IGN--FQHSGQQFSKQAGAVH---LPNY 748
>gi|222641919|gb|EEE70051.1| hypothetical protein OsJ_30014 [Oryza sativa Japonica Group]
Length = 838
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 192/337 (56%), Gaps = 55/337 (16%)
Query: 509 DFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVF 568
+ WRG IAKGG+PVCRARC+P KG+E LP+VVNCSARTGLDMLAKHY +A GFDIVF
Sbjct: 375 EHFWRGSIAKGGSPVCRARCLPIRKGVEIPLPDVVNCSARTGLDMLAKHYRDASGFDIVF 434
Query: 569 FLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGV 628
FLPDSEDDF SYTEFLRYLGSK+RAGV K D GTTLFLVPPSDFL VL+V GPERLYGV
Sbjct: 435 FLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDGGTTLFLVPPSDFLRNVLQVDGPERLYGV 494
Query: 629 VLKLPQQA----------------MVPPQT---VDKQNIPPPHAEYGLTRPKEEHVLPVD 669
VL +PQ + + P++ D++ I P Y + P H D
Sbjct: 495 VLHIPQMSAAAPASAPTPAVQRPQLTAPESQPYYDEREI-PLQRRYSMITPSNNHHRDAD 553
Query: 670 YNRFSHDDS--KVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVK----LTPELIA 723
+ +DS ++ + P E + N A + AG++ L P++IA
Sbjct: 554 HRGSLREDSLHQLGQILARPRVDEGQVVQ-------PNLAGIPTNAGLQVQPSLQPDMIA 606
Query: 724 TLTSLIPATKSAEVAPG----SSSARPLLAEPHVQSIEQLGNHYNPQAQSLTHHYASMSS 779
TL L+P+ +S+ + G SS+ +P L + + L + P+ Q++ AS SS
Sbjct: 607 TLAKLLPSGQSSALVTGQLPLSSTDQPALTQ--MNDASTLAKVWRPENQAM----ASTSS 660
Query: 780 TPSHSAQMLLGNNQLQESTASLSQQ-GMVYSRPLPNF 815
+GN Q S S+Q G V+ LPN+
Sbjct: 661 LEQ------IGN--FQHSGQQFSKQAGAVH---LPNY 686
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 182/285 (63%), Gaps = 27/285 (9%)
Query: 41 FGKFGALDKVTTYSS-RSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKH 99
F GALD V + RS+AFV F+ V +A+AA DALQGS +G+ +++EFARPA+ K+
Sbjct: 4 FSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDALQGSKVKGSVVRLEFARPARAVKN 63
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
LWVGGIS ++SKEELEE F KFG ++ F +D +A++++ +LEDA A + +NGR +G
Sbjct: 64 LWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSAYIDFDKLEDAISAHRALNGRVLG 123
Query: 160 GEQLRVDFLRSQPSRREQW--PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRD 217
G++L VDF RS+ R +W S + R GP G G RNR+
Sbjct: 124 GQELCVDFQRSRG--RAEWLETGSFNGRTGPAKGYGV-------------------RNRE 162
Query: 218 GPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEG 277
P+ +LWVG+P + +++E+ L AM + G + K +P+R Y+FVEF +V EA AK+
Sbjct: 163 SNPTNVLWVGFPNTAKINEEALRQAMAVHGAVTNTKVFPTRQYAFVEFATVGEASNAKKN 222
Query: 278 LQGRLFNDPRITIMFSSSELAPGK-DYPGSYSGTKGPRSEMFFGD 321
L GRLFND RI I+FS+SELAP K D P + SG P+SEM++ D
Sbjct: 223 LDGRLFNDQRIQILFSNSELAPNKLDNPTAVSGF--PKSEMYYDD 265
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
NLWVG +S+ + +L+E F KFG +D + ++ A++ F ++EDA +A AL G
Sbjct: 63 NLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSAYIDFDKLEDAISAHRALNGRVL 122
Query: 82 RGNPIKIEFAR------------------PAK----------PSKHLWVGG-ISQTVSKE 112
G + ++F R PAK P+ LWVG + +++E
Sbjct: 123 GGQELCVDFQRSRGRAEWLETGSFNGRTGPAKGYGVRNRESNPTNVLWVGFPNTAKINEE 182
Query: 113 ELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
L + G + + K AFVE++ + +A+ A KN++GR +++++ F
Sbjct: 183 ALRQAMAVHGAVTNTKVFPTRQYAFVEFATVGEASNAKKNLDGRLFNDQRIQILF----- 237
Query: 173 SRREQWPNSHD 183
S E PN D
Sbjct: 238 SNSELAPNKLD 248
>gi|60678542|gb|AAX33633.1| FPA-like protein [Pisum sativum]
Length = 104
Score = 184 bits (468), Expect = 1e-43, Method: Composition-based stats.
Identities = 86/105 (81%), Positives = 98/105 (93%), Gaps = 1/105 (0%)
Query: 521 TPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASY 580
+PVC ARC+P GKGI +ELPEVV+CSARTGLD+LAKHYA+AI F+IVFFLPDSEDDF++Y
Sbjct: 1 SPVCHARCIPIGKGIGAELPEVVDCSARTGLDVLAKHYADAIDFEIVFFLPDSEDDFSAY 60
Query: 581 TEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERL 625
TEFLRYLG+KNRAGVAKF + TTLFLVPPSDFL+KVLKV GPERL
Sbjct: 61 TEFLRYLGAKNRAGVAKFGN-TTLFLVPPSDFLTKVLKVNGPERL 104
>gi|449475881|ref|XP_004154577.1| PREDICTED: uncharacterized protein LOC101229209 [Cucumis sativus]
Length = 898
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 114/184 (61%), Gaps = 16/184 (8%)
Query: 482 NVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPE 541
N R R SP + + + ++ W G IAKGGTPVCRARC P GK ++ LPE
Sbjct: 440 NDVARKRFSPDSEQSSV---------KEWKWEGTIAKGGTPVCRARCFPVGKVLDILLPE 490
Query: 542 VVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDG 601
++C+ARTGLDML+KHY EA +VFF+P S+ D Y EF+ YLG K RA V+K DD
Sbjct: 491 FLDCTARTGLDMLSKHYYEAASAWVVFFVPQSDSDIVFYNEFMHYLGEKQRAAVSKLDDR 550
Query: 602 TTLFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQAMV--PP----QTVDKQNIPPPHAEY 655
TTLFLVPPS+F KVLKV G + GVVL+L + + PP +T D N+ P H+E
Sbjct: 551 TTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAIARPPPYQNETKDA-NLLPLHSET 609
Query: 656 GLTR 659
T+
Sbjct: 610 LYTK 613
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 129/228 (56%), Gaps = 2/228 (0%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG ++ V + +L F +FG ++ F + AFV + R EDA A++ + G
Sbjct: 35 PSRHLWVGNLAHVVVERDLSRYFSQFGELDSIAFQPSRSYAFVNFKRDEDAMAAMRELQG 94
Query: 156 RQIGGEQLRVDFLRS-QPSRREQWPNSHDARDGPIIG-RGTGFSDNHSAYKRSHPQSSVG 213
+GG ++++F ++ +PS + + R+ G RG+ H + + +P+ S
Sbjct: 95 FSLGGNPIKIEFTKADKPSASSRDEDYSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKM 154
Query: 214 RNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARR 273
+++ PS++LW+G+P +++DE +L A FGEI++I ++P R Y+FV FR V A R
Sbjct: 155 SDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAWR 214
Query: 274 AKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGD 321
AKE LQG+LF +PR+ I F+ ++ S + PRS F +
Sbjct: 215 AKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSINAPLSPRSPHLFSN 262
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 85/203 (41%), Gaps = 50/203 (24%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNL+ + DL F +FG LD + SRS+AFV FKR EDA AA LQ
Sbjct: 34 PPSRHLWVGNLAHVVVERDLSRYFSQFGELDSIAFQPSRSYAFVNFKRDEDAMAAMRELQ 93
Query: 78 GSDFRGNPIKIEFARPAKPS--------------------------KH------------ 99
G GNPIKIEF + KPS +H
Sbjct: 94 GFSLGGNPIKIEFTKADKPSASSRDEDYSQHREEKYYGARGSFSQGRHVSPDQFYPEKSK 153
Query: 100 -----------LWVGGIS-QTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAA 147
LW+G + V + L + F FG I+ AFV + + A
Sbjct: 154 MSDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAW 213
Query: 148 EALKNINGRQIGGEQLRVDFLRS 170
A + + G+ G ++ + F ++
Sbjct: 214 RAKETLQGKLFGNPRVHICFAKN 236
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 14 DKEAPPSSNLWVGNLSADTTD-ADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
DK PS LW+G + D L++ F FG +DK+TT+ R++AFV F+ V A A
Sbjct: 156 DKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAWRA 215
Query: 73 KDALQGSDFRGNP-IKIEFAR 92
K+ LQG F GNP + I FA+
Sbjct: 216 KETLQGKLF-GNPRVHICFAK 235
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 215 NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
N PPS+ LWVG V + E+ L FGE++ I PSR+Y+FV F+ ++A A
Sbjct: 30 NSSNPPSRHLWVGNLAHVVV-ERDLSRYFSQFGELDSIAFQPSRSYAFVNFKRDEDAMAA 88
Query: 275 KEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPN 334
LQG I I F+ ++ YS R E ++G + SQ + P+
Sbjct: 89 MRELQGFSLGGNPIKIEFTKADKPSASSRDEDYSQH---REEKYYGARGSFSQGRHVSPD 145
Query: 335 Q 335
Q
Sbjct: 146 Q 146
>gi|357462061|ref|XP_003601312.1| Flowering time control protein FPA [Medicago truncatula]
gi|355490360|gb|AES71563.1| Flowering time control protein FPA [Medicago truncatula]
Length = 881
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 93/129 (72%)
Query: 504 NPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIG 563
N S++ W G IAKGGTP+CRARC P GK ++ LPE ++C+ART LDML+KHY +A+G
Sbjct: 441 NSSSSEWKWEGTIAKGGTPICRARCFPVGKVLDIALPEFLDCTARTSLDMLSKHYYQAVG 500
Query: 564 FDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPE 623
+VFF+P S+ D Y EF+ YL K RA V+K DD TTLFLVPPSDF KVLKV G
Sbjct: 501 VWVVFFVPGSDADIEFYNEFMHYLEEKKRAAVSKVDDKTTLFLVPPSDFSEKVLKVPGKL 560
Query: 624 RLYGVVLKL 632
+ GV+L+L
Sbjct: 561 SISGVILRL 569
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 61/94 (64%)
Query: 220 PSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQ 279
PS++LWVG+P +++DE +L A FGEIE+I ++P R+Y+FV + SV A A + LQ
Sbjct: 123 PSEVLWVGFPAQLKVDESILGRAFAPFGEIEKISTFPGRSYAFVRYSSVASACIALDALQ 182
Query: 280 GRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGP 313
G+LF +PR+ I F+ SE S++G + P
Sbjct: 183 GKLFGNPRVHICFAKSESGSSSSGKSSFNGPRSP 216
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 14 DKEAPPSSNLWVG---NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAK 70
DK PS LWVG L D ++ L F FG ++K++T+ RS+AFV + V A
Sbjct: 118 DKNPEPSEVLWVGFPAQLKVD--ESILGRAFAPFGEIEKISTFPGRSYAFVRYSSVASAC 175
Query: 71 AAKDALQGSDFRGNP-IKIEFA 91
A DALQG F GNP + I FA
Sbjct: 176 IALDALQGKLF-GNPRVHICFA 196
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 95 KPSKHLWVGGISQ-TVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
+PS+ LWVG +Q V + L F FG IE + AFV YS + A AL +
Sbjct: 122 EPSEVLWVGFPAQLKVDESILGRAFAPFGEIEKISTFPGRSYAFVRYSSVASACIALDAL 181
Query: 154 NGRQIGGEQLRVDF 167
G+ G ++ + F
Sbjct: 182 QGKLFGNPRVHICF 195
>gi|148906028|gb|ABR16173.1| unknown [Picea sitchensis]
Length = 1019
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 94/129 (72%)
Query: 506 IDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFD 565
++ ++ W+G IAKGGTPVCRARC P GK ++ LPE +NC+ARTGLDMLAKH+ +A
Sbjct: 524 LNEEWKWQGTIAKGGTPVCRARCFPVGKVLDVTLPEFLNCTARTGLDMLAKHFYQAGSVG 583
Query: 566 IVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERL 625
+VFF+P+++ D Y EF+ YLG K RA VAK +GTTLFLVPPS F +VLKV G +
Sbjct: 584 VVFFVPENDPDIIPYNEFMHYLGEKQRAAVAKLGEGTTLFLVPPSQFSEQVLKVPGNVSI 643
Query: 626 YGVVLKLPQ 634
GV+LK Q
Sbjct: 644 SGVILKFQQ 652
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
S++LWVG + Q V++ L E F +FG IE N AF+ + + EDA A +++ G
Sbjct: 50 SRNLWVGNVYQNVTETALAEQFSRFGEIESITVYSARNYAFINFRKEEDAVIAKRSLQGL 109
Query: 157 QIGGEQLRVDFLR--SQPSRREQWPNSHDARDGPIIGRGTGFSD---------NHSAYKR 205
+ G LR++F + S S RD + GFS N A
Sbjct: 110 VLSGLALRIEFAKGDSHLSSSHHADEHSRLRDDRRLAEVVGFSGLRDSRVPGPNSDASSD 169
Query: 206 SHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEF 265
H + ++D PS++LW+G+P +++DE L FGEIE I ++P R Y+FV+F
Sbjct: 170 KHKE-----DKDAEPSEVLWIGFPSYMEIDEMGLRKEFSPFGEIEHITTFPGRTYAFVQF 224
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGT 310
SV A RAKE LQG+LFN+PR+ I FS E+ + S +GT
Sbjct: 225 CSVVAACRAKEALQGKLFNNPRVNICFSKREVRSIEHGRNSVNGT 269
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 54/216 (25%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S NLWVGN+ + T+ L E F +FG ++ +T YS+R++AF+ F++ EDA AK +LQG
Sbjct: 50 SRNLWVGNVYQNVTETALAEQFSRFGEIESITVYSARNYAFINFRKEEDAVIAKRSLQGL 109
Query: 80 DFRGNPIKIEFAR------------------------------------------PAKPS 97
G ++IEFA+ A
Sbjct: 110 VLSGLALRIEFAKGDSHLSSSHHADEHSRLRDDRRLAEVVGFSGLRDSRVPGPNSDASSD 169
Query: 98 KH-----------LWVGGIS-QTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLED 145
KH LW+G S + + L + F FG IE AFV++ +
Sbjct: 170 KHKEDKDAEPSEVLWIGFPSYMEIDEMGLRKEFSPFGEIEHITTFPGRTYAFVQFCSVVA 229
Query: 146 AAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
A A + + G+ ++ + F + + E NS
Sbjct: 230 ACRAKEALQGKLFNNPRVNICFSKREVRSIEHGRNS 265
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 13 DDKEAPPSSNLWVGNLS-ADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+DK+A PS LW+G S + + L++ F FG ++ +TT+ R++AFV F V A
Sbjct: 173 EDKDAEPSEVLWIGFPSYMEIDEMGLRKEFSPFGEIEHITTFPGRTYAFVQFCSVVAACR 232
Query: 72 AKDALQGSDFRGNPIKIEFAR 92
AK+ALQG F + I F++
Sbjct: 233 AKEALQGKLFNNPRVNICFSK 253
>gi|356577389|ref|XP_003556809.1| PREDICTED: uncharacterized protein LOC100811668 [Glycine max]
Length = 925
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 122/211 (57%), Gaps = 21/211 (9%)
Query: 508 SDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIV 567
+++ W G IAKGGTPVCRARC P GK ++ LPE ++C+A+TGLDML+KHY +A+G +V
Sbjct: 484 TEWKWEGTIAKGGTPVCRARCFPVGKVLDMMLPEFLDCTAKTGLDMLSKHYYQAVGVWVV 543
Query: 568 FFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYG 627
FF+P S+ D Y EF+ YL K RA V+K DD TTLFLVPPS+F K+LKV G + G
Sbjct: 544 FFVPGSDADMQCYNEFMHYLEEKKRAAVSKLDDKTTLFLVPPSEFSEKILKVPGRLSISG 603
Query: 628 VVLKLPQQAMVPPQTVDKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFP 687
V+L+L + N P H + +T + N S++++ + K FP
Sbjct: 604 VILRLENPGL---------NHGPEHIQREMT----------NENLLSYNENILHPKSSFP 644
Query: 688 HASEPLIAHSSSMDYGSNNAAAISQAGVKLT 718
P S M ++ + +S G K T
Sbjct: 645 SVRVPTSPSISEM--SNSGISNLSFLGNKFT 673
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 132/222 (59%), Gaps = 9/222 (4%)
Query: 99 HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQI 158
HLWVG +S + +EEL FL++G +E+ F + AF+ + EDA +AL+ + G +
Sbjct: 44 HLWVGNLSHNIVEEELAHHFLRYGPLENVAFQPGRSYAFINFRMDEDAIDALRALQGFPL 103
Query: 159 GGEQLRVDFLRS-QPSRREQWPN-SHDARDGPIIGRGTGFSD-----NHSAYKRSHPQSS 211
G LR++F ++ +PS ++ + S D R+ + RG+ FS +H + + + S
Sbjct: 104 AGNPLRIEFAKADKPSAMQRDEDCSWDERNSAL--RGSPFSQREFRGHHGSPELHYSDKS 161
Query: 212 VGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEA 271
+++ PS++LW+G+P +++DE +L A FGEI +I ++P R+Y+FV FRS+ A
Sbjct: 162 KLSDKNPEPSEVLWIGFPAQLKVDESILRKAFSPFGEIVKITTFPGRSYAFVRFRSLTSA 221
Query: 272 RRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGP 313
RA++ L+G+LF +PR+ I F+ SE S++G + P
Sbjct: 222 CRARDDLKGKLFGNPRVHICFAKSETGSSNSERRSFNGPRSP 263
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
+LWVGNLS + + +L F ++G L+ V RS+AF+ F+ EDA A ALQG
Sbjct: 44 HLWVGNLSHNIVEEELAHHFLRYGPLENVAFQPGRSYAFINFRMDEDAIDALRALQGFPL 103
Query: 82 RGNPIKIEFARPAKPS 97
GNP++IEFA+ KPS
Sbjct: 104 AGNPLRIEFAKADKPS 119
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 14 DKEAPPSSNLWVG---NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAK 70
DK PS LW+G L D ++ L++ F FG + K+TT+ RS+AFV F+ + A
Sbjct: 165 DKNPEPSEVLWIGFPAQLKVD--ESILRKAFSPFGEIVKITTFPGRSYAFVRFRSLTSAC 222
Query: 71 AAKDALQGSDFRGNP-IKIEFAR 92
A+D L+G F GNP + I FA+
Sbjct: 223 RARDDLKGKLF-GNPRVHICFAK 244
>gi|225447446|ref|XP_002266343.1| PREDICTED: uncharacterized protein LOC100249524 [Vitis vinifera]
Length = 953
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 113/185 (61%)
Query: 448 ATFPSRKIDDHGLVLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGFGRNPID 507
+F +++ DH + L + +G S + F G +PV K + +
Sbjct: 451 GSFGYKQMSDHPMNLTRPHGEMSEQWKASYDGFQVGSGSLSSNPVDWKRLTPESHPSSLS 510
Query: 508 SDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIV 567
++ W G IAKGG+ +CRARC P GK ++ LPE ++C+ARTGLDMLAKHY +A +V
Sbjct: 511 GEWKWEGTIAKGGSSICRARCFPVGKVMDIMLPEFLDCTARTGLDMLAKHYYQAASAWVV 570
Query: 568 FFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYG 627
FF+P+S+ D Y EF+ YLG K RA VAK D+ TTLFLVPPS+F KVLKV G + G
Sbjct: 571 FFVPESDADIGYYNEFMNYLGEKQRAAVAKLDERTTLFLVPPSEFSEKVLKVPGKLSISG 630
Query: 628 VVLKL 632
VVL+L
Sbjct: 631 VVLRL 635
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 127/213 (59%), Gaps = 11/213 (5%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG +S ++S+ L + FL+FG ++ F + AF+ + + EDA A++++ G
Sbjct: 52 PSRHLWVGNLSHSISENTLTDPFLQFGELDTVAFQPGRSYAFINFKQEEDAIHAMRSLQG 111
Query: 156 RQIGGEQLRVDFLR----SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS----- 206
+ G L+++F + S SR E + D + I RG+ FS S +
Sbjct: 112 FSVAGMPLKIEFAKAEKSSTASRDEDYLQRRDEQRSTI--RGSPFSQRDSRTRHGSPDTF 169
Query: 207 HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFR 266
+P S +R G P ++LW+G+P +++DE +L A FGEIE+I S+P R+Y+FV+FR
Sbjct: 170 YPDKSSISDRKGEPCEVLWIGFPSLLKVDETILRKAFSPFGEIEKITSFPGRSYAFVQFR 229
Query: 267 SVDEARRAKEGLQGRLFNDPRITIMFSSSELAP 299
SV A RAKE LQG+LF +PR+ I F+ SE P
Sbjct: 230 SVTAACRAKETLQGKLFGNPRVHICFAKSEPGP 262
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 50/80 (62%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNLS ++ L + F +FG LD V RS+AF+ FK+ EDA A +LQ
Sbjct: 51 PPSRHLWVGNLSHSISENTLTDPFLQFGELDTVAFQPGRSYAFINFKQEEDAIHAMRSLQ 110
Query: 78 GSDFRGNPIKIEFARPAKPS 97
G G P+KIEFA+ K S
Sbjct: 111 GFSVAGMPLKIEFAKAEKSS 130
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 14 DKEAPPSSNLWVGNLSADTTDAD-LKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
D++ P LW+G S D L++ F FG ++K+T++ RS+AFV F+ V A A
Sbjct: 178 DRKGEPCEVLWIGFPSLLKVDETILRKAFSPFGEIEKITSFPGRSYAFVQFRSVTAACRA 237
Query: 73 KDALQGSDFRGNP-IKIEFAR 92
K+ LQG F GNP + I FA+
Sbjct: 238 KETLQGKLF-GNPRVHICFAK 257
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 203 YKRSHP-----QSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPS 257
++R +P +S GR+ PPS+ LWVG S + E L + + FGE++ + P
Sbjct: 31 FRRDYPPRFEEKSHSGRSSH-PPSRHLWVGN-LSHSISENTLTDPFLQFGELDTVAFQPG 88
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
R+Y+F+ F+ ++A A LQG + I F+ +E
Sbjct: 89 RSYAFINFKQEEDAIHAMRSLQGFSVAGMPLKIEFAKAE 127
>gi|356549711|ref|XP_003543235.1| PREDICTED: uncharacterized protein LOC100816831 [Glycine max]
Length = 934
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 217/480 (45%), Gaps = 82/480 (17%)
Query: 508 SDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIV 567
+++ W G IAKGGTPVC ARC P GK ++ LPE ++C+A+TGLDML+KHY +A+G +V
Sbjct: 487 TEWKWEGTIAKGGTPVCCARCFPVGKVLDMMLPEFLDCTAKTGLDMLSKHYYQAVGVWVV 546
Query: 568 FFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYG 627
FF+P S+ D Y EF+ YL K RA VAK DD TTLFLVPPS+F KVLKV G + G
Sbjct: 547 FFVPGSDADMECYNEFMHYLEEKQRAAVAKLDDKTTLFLVPPSEFSEKVLKVPGRLSISG 606
Query: 628 VVLKLPQQAMVPPQTVDKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFP 687
V+L+L + N P H + +T + N S++++ + K FP
Sbjct: 607 VILRLENPDL---------NHGPEHIQREMT----------NKNLLSYNENILHLKSTFP 647
Query: 688 HASEPLIAHSSSMDYGSNNAAAISQAGVKL--------TPELIATLTSL-------IPA- 731
P M G++ + +S G K + +A+++ P
Sbjct: 648 SVRVPTFPSIPEM--GNSGISNLSFLGNKFAAAPSVSDSARAVASMSEFHDERSHNYPTQ 705
Query: 732 --TKSAEVAPGSSSARPLLAEPHVQSIEQLGNHYNP------QAQSLTHHYASMSSTPSH 783
T S + S+ A PL +P + E + + + P Q + H + +S P +
Sbjct: 706 QRTSSQNLQNFSNKALPL--QPSSGAGEPIADEHQPIIPRAAQDVNAIQHPSGISGIPFY 763
Query: 784 SAQMLLGNNQLQESTASLSQQGMVYSRPL--PNFSIAPQAAPVAVSPPVHQQYQFAAPSN 841
+ LS + + PL P ++AP+ + + QQ Q S+
Sbjct: 764 -------------GDSKLSYPDIRHLDPLSVPVGALAPEQLAQLAATLLEQQRQSGGSSS 810
Query: 842 SQKGYGMMQGTEASTLYGSSVFQQPNNPT------AVSNQV---NLSQPQNVMTVSVDKV 892
+ Q T SS F +N + A N V +LS Q + +
Sbjct: 811 TSALADPQQINRFGTSDTSSRFISSDNSSRPPQKYATENNVVNSDLSASQMGQSQMLQMQ 870
Query: 893 NLEHPNHVQQLQSVLSGAGQGTSDG-----------EVDKNQRYQSTLQFAANLLLQIQQ 941
+ +V QL ++ Q ++G +VD +R Q+TLQ AA LL QIQ
Sbjct: 871 KQQQIVNVPQLSQIVQREPQSEANGNQLDSSLQEDADVDPQRRLQATLQLAAVLLHQIQH 930
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 13/257 (5%)
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKF 121
Y R +D + + + G D R + +R PS+HLWVG +S + +EEL FL++
Sbjct: 15 YPSRCDDNRG--NGVGGRDNRNS------SRNNPPSRHLWVGNLSHNIVEEELAHHFLRY 66
Query: 122 GNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
G +E+ F + AF+ + EDA +AL+ + G + G LR++F ++ Q
Sbjct: 67 GPLENVAFQPGRSYAFINFRMDEDAIDALRALQGFPLAGNPLRIEFAKADKPSAMQHDED 126
Query: 182 HDARDGPIIGRGTGFSDN-----HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
+ + I RG+ FS H + + + S +++ PS++LW+G+P ++++E
Sbjct: 127 YSWDERNSILRGSPFSQREFRGYHGSPEPHYSDKSKLGDKNPEPSEVLWIGFPAQLKVEE 186
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+L A FGEI +I ++P R+Y+FV FRS+ A A++ L+G+LF +PR+ I F+ SE
Sbjct: 187 SILRKAFSPFGEIVKITTFPGRSYAFVRFRSLTSACSARDDLKGKLFGNPRVHICFAKSE 246
Query: 297 LAPGKDYPGSYSGTKGP 313
S++G + P
Sbjct: 247 TGSSNSERRSFNGPRSP 263
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 53/210 (25%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ PPS +LWVGNLS + + +L F ++G L+ V RS+AF+ F+ EDA A
Sbjct: 37 RNNPPSRHLWVGNLSHNIVEEELAHHFLRYGPLENVAFQPGRSYAFINFRMDEDAIDALR 96
Query: 75 ALQGSDFRGNPIKIEFARPAKP-------------------------------------- 96
ALQG GNP++IEFA+ KP
Sbjct: 97 ALQGFPLAGNPLRIEFAKADKPSAMQHDEDYSWDERNSILRGSPFSQREFRGYHGSPEPH 156
Query: 97 --------------SKHLWVGGISQTVSKEE-LEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
S+ LW+G +Q +E L + F FG I + AFV +
Sbjct: 157 YSDKSKLGDKNPEPSEVLWIGFPAQLKVEESILRKAFSPFGEIVKITTFPGRSYAFVRFR 216
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
L A A ++ G+ G ++ + F +S+
Sbjct: 217 SLTSACSARDDLKGKLFGNPRVHICFAKSE 246
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 14 DKEAPPSSNLWVG-NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
DK PS LW+G ++ L++ F FG + K+TT+ RS+AFV F+ + A +A
Sbjct: 165 DKNPEPSEVLWIGFPAQLKVEESILRKAFSPFGEIVKITTFPGRSYAFVRFRSLTSACSA 224
Query: 73 KDALQGSDFRGNP-IKIEFAR 92
+D L+G F GNP + I FA+
Sbjct: 225 RDDLKGKLF-GNPRVHICFAK 244
>gi|296085076|emb|CBI28491.3| unnamed protein product [Vitis vinifera]
Length = 1054
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 99/152 (65%), Gaps = 14/152 (9%)
Query: 495 KVTAGGFGRNPID--------------SDFIWRGIIAKGGTPVCRARCVPFGKGIESELP 540
+V +G NP+D ++ W G IAKGG+ +CRARC P GK ++ LP
Sbjct: 855 QVGSGSLSSNPVDWKRLTPESHPSSLSGEWKWEGTIAKGGSSICRARCFPVGKVMDIMLP 914
Query: 541 EVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDD 600
E ++C+ARTGLDMLAKHY +A +VFF+P+S+ D Y EF+ YLG K RA VAK D+
Sbjct: 915 EFLDCTARTGLDMLAKHYYQAASAWVVFFVPESDADIGYYNEFMNYLGEKQRAAVAKLDE 974
Query: 601 GTTLFLVPPSDFLSKVLKVVGPERLYGVVLKL 632
TTLFLVPPS+F KVLKV G + GVVL+L
Sbjct: 975 RTTLFLVPPSEFSEKVLKVPGKLSISGVVLRL 1006
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 127/213 (59%), Gaps = 11/213 (5%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG +S ++S+ L + FL+FG ++ F + AF+ + + EDA A++++ G
Sbjct: 423 PSRHLWVGNLSHSISENTLTDPFLQFGELDTVAFQPGRSYAFINFKQEEDAIHAMRSLQG 482
Query: 156 RQIGGEQLRVDFLR----SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS----- 206
+ G L+++F + S SR E + D + I RG+ FS S +
Sbjct: 483 FSVAGMPLKIEFAKAEKSSTASRDEDYLQRRDEQRSTI--RGSPFSQRDSRTRHGSPDTF 540
Query: 207 HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFR 266
+P S +R G P ++LW+G+P +++DE +L A FGEIE+I S+P R+Y+FV+FR
Sbjct: 541 YPDKSSISDRKGEPCEVLWIGFPSLLKVDETILRKAFSPFGEIEKITSFPGRSYAFVQFR 600
Query: 267 SVDEARRAKEGLQGRLFNDPRITIMFSSSELAP 299
SV A RAKE LQG+LF +PR+ I F+ SE P
Sbjct: 601 SVTAACRAKETLQGKLFGNPRVHICFAKSEPGP 633
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 50/80 (62%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNLS ++ L + F +FG LD V RS+AF+ FK+ EDA A +LQ
Sbjct: 422 PPSRHLWVGNLSHSISENTLTDPFLQFGELDTVAFQPGRSYAFINFKQEEDAIHAMRSLQ 481
Query: 78 GSDFRGNPIKIEFARPAKPS 97
G G P+KIEFA+ K S
Sbjct: 482 GFSVAGMPLKIEFAKAEKSS 501
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 14 DKEAPPSSNLWVGNLSADTTDAD-LKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
D++ P LW+G S D L++ F FG ++K+T++ RS+AFV F+ V A A
Sbjct: 549 DRKGEPCEVLWIGFPSLLKVDETILRKAFSPFGEIEKITSFPGRSYAFVQFRSVTAACRA 608
Query: 73 KDALQGSDFRGNP-IKIEFAR 92
K+ LQG F GNP + I FA+
Sbjct: 609 KETLQGKLF-GNPRVHICFAK 628
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 203 YKRSHP-----QSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPS 257
++R +P +S GR+ PPS+ LWVG S + E L + + FGE++ + P
Sbjct: 402 FRRDYPPRFEEKSHSGRSSH-PPSRHLWVG-NLSHSISENTLTDPFLQFGELDTVAFQPG 459
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
R+Y+F+ F+ ++A A LQG + I F+ +E
Sbjct: 460 RSYAFINFKQEEDAIHAMRSLQGFSVAGMPLKIEFAKAE 498
>gi|5823575|emb|CAB53757.1| putative protein [Arabidopsis thaliana]
gi|7267966|emb|CAB78307.1| putative protein [Arabidopsis thaliana]
Length = 695
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 90/128 (70%)
Query: 505 PIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGF 564
P D+ W G IAKGG P+CRA+C P GK ++ LPE ++C+ARTGLDMLAKHY ++
Sbjct: 336 PSLKDWNWEGTIAKGGNPICRAKCFPVGKVMDMMLPEFLDCTARTGLDMLAKHYYQSSKA 395
Query: 565 DIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPER 624
+VFF+P S+ D Y EF+ YL K RA V+K DD TTLFLVPPSDF KVLKV G
Sbjct: 396 WVVFFVPGSDADIVFYDEFMHYLEEKQRAAVSKLDDTTTLFLVPPSDFSEKVLKVPGKLS 455
Query: 625 LYGVVLKL 632
+ GV+L+L
Sbjct: 456 ISGVILRL 463
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 61/82 (74%)
Query: 215 NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
+R+ PS++L++G+P S+++D+ +L N FGEI ++ +P R+Y+FV+FR++ A +A
Sbjct: 16 DRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKA 75
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
KE LQG+LF +PR+ I F+ SE
Sbjct: 76 KESLQGKLFGNPRVHICFAKSE 97
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 13 DDKEAPPSSNLWVG-NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ A PS L++G S DA L+ +F FG + KVT + RS+AFV F+ + A
Sbjct: 15 NDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACK 74
Query: 72 AKDALQGSDFRGNP-IKIEFAR 92
AK++LQG F GNP + I FA+
Sbjct: 75 AKESLQGKLF-GNPRVHICFAK 95
>gi|110739368|dbj|BAF01596.1| hypothetical protein [Arabidopsis thaliana]
Length = 823
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 90/128 (70%)
Query: 505 PIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGF 564
P D+ W G IAKGG P+CRA+C P GK ++ LPE ++C+ARTGLDMLAKHY ++
Sbjct: 464 PSLKDWNWEGTIAKGGNPICRAKCFPVGKVMDMMLPEFLDCTARTGLDMLAKHYYQSSKA 523
Query: 565 DIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPER 624
+VFF+P S+ D Y EF+ YL K RA V+K DD TTLFLVPPSDF KVLKV G
Sbjct: 524 WVVFFVPGSDADIVFYDEFMHYLEEKQRAAVSKLDDTTTLFLVPPSDFSEKVLKVPGKLS 583
Query: 625 LYGVVLKL 632
+ GV+L+L
Sbjct: 584 ISGVILRL 591
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 8/207 (3%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG + + + EL + FL+FG +E F + AFV ++ EDA A++++ G
Sbjct: 21 PSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQG 80
Query: 156 RQIGGEQLRVDFLRSQPSR---REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS-- 210
+ G LR++F +++ S R HD + RG+ F S + P +
Sbjct: 81 FPLSGNPLRIEFAKAEKSSAGSRTDDIYRHDEQRS--AARGSSFVQRDSRMRYESPDTYS 138
Query: 211 -SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
S +R+ PS++L++G+P S+++D+ +L N FGEI ++ +P R+Y+FV+FR++
Sbjct: 139 KSKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLM 198
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSE 296
A +AKE LQG+LF +PR+ I F+ SE
Sbjct: 199 AACKAKESLQGKLFGNPRVHICFAKSE 225
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 52/206 (25%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNL + +L + F +FG L+ + RS+AFV F EDA AA ++LQ
Sbjct: 20 PPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQ 79
Query: 78 GSDFRGNPIKIEFA---------------------------------------------- 91
G GNP++IEFA
Sbjct: 80 GFPLSGNPLRIEFAKAEKSSAGSRTDDIYRHDEQRSAARGSSFVQRDSRMRYESPDTYSK 139
Query: 92 -----RPAKPSKHLWVG-GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLED 145
R A+PS+ L++G S V L F FG I + AFV++ L
Sbjct: 140 SKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMA 199
Query: 146 AAEALKNINGRQIGGEQLRVDFLRSQ 171
A +A +++ G+ G ++ + F +S+
Sbjct: 200 ACKAKESLQGKLFGNPRVHICFAKSE 225
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 13 DDKEAPPSSNLWVG-NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ A PS L++G S DA L+ +F FG + KVT + RS+AFV F+ + A
Sbjct: 143 NDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACK 202
Query: 72 AKDALQGSDFRGNP-IKIEFAR 92
AK++LQG F GNP + I FA+
Sbjct: 203 AKESLQGKLF-GNPRVHICFAK 223
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
GR R+ PPS+ LWVG P + E+ L + + FGE+E + P R+Y+FV F ++A
Sbjct: 15 GRGRN-PPSRHLWVGNLPHGIL-ERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAF 72
Query: 273 RAKEGLQGRLFNDPRITIMFSSSE 296
A E LQG + + I F+ +E
Sbjct: 73 AAIESLQGFPLSGNPLRIEFAKAE 96
>gi|42566726|ref|NP_193001.2| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332657759|gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 823
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 90/128 (70%)
Query: 505 PIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGF 564
P D+ W G IAKGG P+CRA+C P GK ++ LPE ++C+ARTGLDMLAKHY ++
Sbjct: 464 PSLKDWNWEGTIAKGGNPICRAKCFPVGKVMDMMLPEFLDCTARTGLDMLAKHYYQSSKA 523
Query: 565 DIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPER 624
+VFF+P S+ D Y EF+ YL K RA V+K DD TTLFLVPPSDF KVLKV G
Sbjct: 524 WVVFFVPGSDADIVFYDEFMHYLEEKQRAAVSKLDDTTTLFLVPPSDFSEKVLKVPGKLS 583
Query: 625 LYGVVLKL 632
+ GV+L+L
Sbjct: 584 ISGVILRL 591
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 8/207 (3%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG + + + EL + FL+FG +E F + AFV ++ EDA A++++ G
Sbjct: 21 PSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQG 80
Query: 156 RQIGGEQLRVDFLRSQPSR---REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS-- 210
+ G LR++F +++ S R HD + RG+ F S + P +
Sbjct: 81 FPLSGNPLRIEFAKAEKSSTGSRTDDIYRHDEQRS--AARGSSFVQRDSRMRYESPDTYS 138
Query: 211 -SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
S +R+ PS++L++G+P S+++D+ +L N FGEI ++ +P R+Y+FV+FR++
Sbjct: 139 KSKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLM 198
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSE 296
A +AKE LQG+LF +PR+ I F+ SE
Sbjct: 199 AACKAKESLQGKLFGNPRVHICFAKSE 225
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 52/206 (25%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNL + +L + F +FG L+ + RS+AFV F EDA AA ++LQ
Sbjct: 20 PPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQ 79
Query: 78 GSDFRGNPIKIEFA---------------------------------------------- 91
G GNP++IEFA
Sbjct: 80 GFPLSGNPLRIEFAKAEKSSTGSRTDDIYRHDEQRSAARGSSFVQRDSRMRYESPDTYSK 139
Query: 92 -----RPAKPSKHLWVG-GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLED 145
R A+PS+ L++G S V L F FG I + AFV++ L
Sbjct: 140 SKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMA 199
Query: 146 AAEALKNINGRQIGGEQLRVDFLRSQ 171
A +A +++ G+ G ++ + F +S+
Sbjct: 200 ACKAKESLQGKLFGNPRVHICFAKSE 225
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 13 DDKEAPPSSNLWVG-NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ A PS L++G S DA L+ +F FG + KVT + RS+AFV F+ + A
Sbjct: 143 NDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACK 202
Query: 72 AKDALQGSDFRGNP-IKIEFAR 92
AK++LQG F GNP + I FA+
Sbjct: 203 AKESLQGKLF-GNPRVHICFAK 223
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
GR R+ PPS+ LWVG P + E+ L + + FGE+E + P R+Y+FV F ++A
Sbjct: 15 GRGRN-PPSRHLWVGNLPHGIL-ERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAF 72
Query: 273 RAKEGLQGRLFNDPRITIMFSSSE 296
A E LQG + + I F+ +E
Sbjct: 73 AAIESLQGFPLSGNPLRIEFAKAE 96
>gi|110738193|dbj|BAF01027.1| hypothetical protein [Arabidopsis thaliana]
Length = 823
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 90/128 (70%)
Query: 505 PIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGF 564
P D+ W G IAKGG P+CRA+C P GK ++ LPE ++C+ARTGLDMLAKHY ++
Sbjct: 464 PSLKDWNWEGTIAKGGNPICRAKCFPVGKVMDMMLPEFLDCTARTGLDMLAKHYYQSSKA 523
Query: 565 DIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPER 624
+VFF+P S+ D Y EF+ YL K RA V+K DD TTLFLVPPSDF KVLKV G
Sbjct: 524 WVVFFVPGSDADIVFYDEFMHYLEEKQRAAVSKLDDTTTLFLVPPSDFSEKVLKVPGKLS 583
Query: 625 LYGVVLKL 632
+ GV+L+L
Sbjct: 584 ISGVILRL 591
Score = 139 bits (350), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 8/207 (3%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG + + + EL + FL+FG +E F + AFV ++ EDA A++++ G
Sbjct: 21 PSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQG 80
Query: 156 RQIGGEQLRVDFLRSQPSR---REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS-- 210
+ G LR++F +++ S R HD + RG+ F S + P +
Sbjct: 81 FPLSGNPLRIEFAKAEKSSTGSRTDDIYRHDEQRS--AARGSSFVQRDSRMRYESPDTYS 138
Query: 211 -SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
S +R+ PS++L++G+P S+++D+ +L N FGEI ++ +P R+Y+FV+FR++
Sbjct: 139 KSKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLM 198
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSE 296
A +AKE LQG+LF +PR+ I F+ SE
Sbjct: 199 AACKAKESLQGKLFGNPRVHICFAKSE 225
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 52/206 (25%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNL + +L + F +FG L+ + RS+AFV F EDA AA ++LQ
Sbjct: 20 PPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQ 79
Query: 78 GSDFRGNPIKIEFA---------------------------------------------- 91
G GNP++IEFA
Sbjct: 80 GFPLSGNPLRIEFAKAEKSSTGSRTDDIYRHDEQRSAARGSSFVQRDSRMRYESPDTYSK 139
Query: 92 -----RPAKPSKHLWVG-GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLED 145
R A+PS+ L++G S V L F FG I + AFV++ L
Sbjct: 140 SKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMA 199
Query: 146 AAEALKNINGRQIGGEQLRVDFLRSQ 171
A +A +++ G+ G ++ + F +S+
Sbjct: 200 ACKAKESLQGKLFGNPRVHICFAKSE 225
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 13 DDKEAPPSSNLWVG-NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ A PS L++G S DA L+ +F FG + KVT + RS+AFV F+ + A
Sbjct: 143 NDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACK 202
Query: 72 AKDALQGSDFRGNP-IKIEFAR 92
AK++LQG F GNP + I FA+
Sbjct: 203 AKESLQGKLF-GNPRVHICFAK 223
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
GR R+ PPS+ LWVG P + E+ L + + FGE+E + P R+Y+FV F ++A
Sbjct: 15 GRGRN-PPSRHLWVGNLPHGIL-ERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAF 72
Query: 273 RAKEGLQGRLFNDPRITIMFSSSE 296
A E LQG + + I F+ +E
Sbjct: 73 AAIESLQGFPLSGNPLRIEFAKAE 96
>gi|224129262|ref|XP_002320541.1| predicted protein [Populus trichocarpa]
gi|222861314|gb|EEE98856.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 86/121 (71%)
Query: 512 WRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLP 571
W G IAKGGTPVC ARC P GK ++ LP+ ++C+ARTGLDMLAKHY +A +VFF+P
Sbjct: 460 WEGTIAKGGTPVCHARCFPVGKALDFMLPDFLDCTARTGLDMLAKHYYQAASAWVVFFVP 519
Query: 572 DSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLK 631
S+ D Y E + YL K RA VAK DD TTLFLVPPSDF KVL+V G + GV+L+
Sbjct: 520 ASDADMGYYNELMHYLEEKQRAAVAKLDDKTTLFLVPPSDFSEKVLRVPGKLSISGVILR 579
Query: 632 L 632
L
Sbjct: 580 L 580
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 125/210 (59%), Gaps = 11/210 (5%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG +S ++ + +L + FL+FG+++ F + AFV +++ EDA A+K++ G
Sbjct: 6 PSRHLWVGNLSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAIKSLQG 65
Query: 156 RQIGGEQLRVDFLR----SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS- 210
+ G LR++F + S PS E + D + + RG+ F S + + P++
Sbjct: 66 YPLAGNPLRIEFAKADKSSTPSHDEDYLQRRDEQR--LTLRGSPFLQRDSRVRNASPETF 123
Query: 211 ----SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFR 266
S + PS++LW+G+P +++DE +L A FGEIE+I +P R+Y+FV F
Sbjct: 124 YPDKSKMSDNSAEPSEVLWIGFPALLKVDEMILRKAFSPFGEIEKITVFPGRSYAFVRFT 183
Query: 267 SVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
++ A RAKE LQG+LF +PR+ I F+ +E
Sbjct: 184 NLTSACRAKETLQGKLFGNPRVHICFAKNE 213
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 51/80 (63%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNLS + DL + F +FG LD V RS+AFV F + EDA AA +LQ
Sbjct: 5 PPSRHLWVGNLSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAIKSLQ 64
Query: 78 GSDFRGNPIKIEFARPAKPS 97
G GNP++IEFA+ K S
Sbjct: 65 GYPLAGNPLRIEFAKADKSS 84
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 14 DKEAPPSSNLWVGNLSADTTDA-DLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
D A PS LW+G + D L++ F FG ++K+T + RS+AFV F + A A
Sbjct: 132 DNSAEPSEVLWIGFPALLKVDEMILRKAFSPFGEIEKITVFPGRSYAFVRFTNLTSACRA 191
Query: 73 KDALQGSDFRGNP-IKIEFAR 92
K+ LQG F GNP + I FA+
Sbjct: 192 KETLQGKLF-GNPRVHICFAK 211
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 217 DGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ PPS+ LWVG S ++E L + + FG+++ + P R+Y+FV F ++A A +
Sbjct: 3 NNPPSRHLWVGN-LSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAIK 61
Query: 277 GLQGRLFNDPRITIMFSSSE 296
LQG + I F+ ++
Sbjct: 62 SLQGYPLAGNPLRIEFAKAD 81
>gi|297790690|ref|XP_002863230.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297309064|gb|EFH39489.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 89/128 (69%)
Query: 505 PIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGF 564
P D+ W G IAKGG P+C A+C P GK ++ LPE V+C+ARTGLDMLAKHY ++
Sbjct: 455 PSLKDWNWEGTIAKGGNPICGAKCFPVGKVMDMMLPEYVDCTARTGLDMLAKHYYQSSKA 514
Query: 565 DIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPER 624
+VFF+P S+ D Y EF+ YL K RA V+K DD TTLFLVPPSDF KVLKV G
Sbjct: 515 WVVFFVPGSDADIVFYNEFMHYLEEKQRAAVSKLDDTTTLFLVPPSDFSEKVLKVPGKLS 574
Query: 625 LYGVVLKL 632
+ GV+L+L
Sbjct: 575 ISGVILRL 582
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 8/207 (3%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG + + + EL + FL+FG +E F + AFV + EDA A++++ G
Sbjct: 12 PSRHLWVGNLPHGIPERELADRFLRFGELESLAFQPGRSYAFVNFKHNEDAFAAIESLQG 71
Query: 156 RQIGGEQLRVDFLRSQPSR---REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS-- 210
+ G LR++F +++ S R + HD + RG+ F S P +
Sbjct: 72 FPLSGNPLRIEFAKAEKSSTGSRTEDIFRHDEQRS--AARGSSFVQKDSRMLYESPDTYS 129
Query: 211 -SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
S +R+ PS++L++G+P S+++D+ +L N FGEI ++ +P R+Y+FV+FR++
Sbjct: 130 KSKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLM 189
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSE 296
A +AKE LQG+LF +PR+ I F+ SE
Sbjct: 190 AACKAKETLQGKLFGNPRVHICFAKSE 216
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 52/206 (25%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNL + +L + F +FG L+ + RS+AFV FK EDA AA ++LQ
Sbjct: 11 PPSRHLWVGNLPHGIPERELADRFLRFGELESLAFQPGRSYAFVNFKHNEDAFAAIESLQ 70
Query: 78 GSDFRGNPIKIEFA---------------------------------------------- 91
G GNP++IEFA
Sbjct: 71 GFPLSGNPLRIEFAKAEKSSTGSRTEDIFRHDEQRSAARGSSFVQKDSRMLYESPDTYSK 130
Query: 92 -----RPAKPSKHLWVG-GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLED 145
R A+PS+ L++G S V L F FG I + AFV++ L
Sbjct: 131 SKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMA 190
Query: 146 AAEALKNINGRQIGGEQLRVDFLRSQ 171
A +A + + G+ G ++ + F +S+
Sbjct: 191 ACKAKETLQGKLFGNPRVHICFAKSE 216
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 13 DDKEAPPSSNLWVG-NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ A PS L++G S DA L+ +F FG + KVT + RS+AFV F+ + A
Sbjct: 134 NDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACK 193
Query: 72 AKDALQGSDFRGNP-IKIEFAR 92
AK+ LQG F GNP + I FA+
Sbjct: 194 AKETLQGKLF-GNPRVHICFAK 214
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
GR R+ PPS+ LWVG P + E+ L + + FGE+E + P R+Y+FV F+ ++A
Sbjct: 6 GRGRN-PPSRHLWVGNLPH-GIPERELADRFLRFGELESLAFQPGRSYAFVNFKHNEDAF 63
Query: 273 RAKEGLQGRLFNDPRITIMFSSSE 296
A E LQG + + I F+ +E
Sbjct: 64 AAIESLQGFPLSGNPLRIEFAKAE 87
>gi|242048800|ref|XP_002462146.1| hypothetical protein SORBIDRAFT_02g020460 [Sorghum bicolor]
gi|241925523|gb|EER98667.1| hypothetical protein SORBIDRAFT_02g020460 [Sorghum bicolor]
Length = 1019
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 91/129 (70%)
Query: 506 IDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFD 565
+ ++ W G IAKGGTP+CRARC P GK + LPE ++C+ART LDML+KHY +A G
Sbjct: 500 LKDEWKWNGTIAKGGTPICRARCFPVGKVLNFMLPEFLDCTARTSLDMLSKHYYQAAGSW 559
Query: 566 IVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERL 625
+VFF+P+++ D +Y +F+ YLG K RA V K + +TLFLVPPSDF +VL+V G +
Sbjct: 560 VVFFVPENDADMTAYNDFMSYLGDKQRAAVCKLGERSTLFLVPPSDFSEQVLRVPGNVSI 619
Query: 626 YGVVLKLPQ 634
GV+LK Q
Sbjct: 620 SGVILKFQQ 628
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 11/209 (5%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
A PS+HLWVGG++ +V+ +L E FL+ G+IED N AFV + R DA A++ +
Sbjct: 49 APPSRHLWVGGLAPSVTASDLSELFLRCGDIEDVARQPGRNFAFVSFLREGDAVAAVREL 108
Query: 154 NGRQIGGEQLRVDFLR----SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
G ++ G +R++F + S S +++ D R GR S ++ K
Sbjct: 109 QGARLAGAPVRIEFSKGDKASGSSMDDRYTQHADERHSIEHGRKRHLSPENTIDK----- 163
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
RNR PS++LW+G+PP +++DE +L A FG++ R+ ++P R Y+FV++ S+
Sbjct: 164 --YKRNRPMEPSEVLWIGFPPGLKVDEALLWEAFSPFGKVLRVTTFPGRTYAFVQYTSIA 221
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSELA 298
A RAKE LQG+LFN+ R++I FS +E A
Sbjct: 222 AACRAKEALQGKLFNNSRVSICFSRNEGA 250
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 49/202 (24%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
APPS +LWVG L+ T +DL ELF + G ++ V R+FAFV F R DA AA L
Sbjct: 49 APPSRHLWVGGLAPSVTASDLSELFLRCGDIEDVARQPGRNFAFVSFLREGDAVAAVREL 108
Query: 77 QGSDFRGNPIKIEFA--------------------------------------------R 92
QG+ G P++IEF+ R
Sbjct: 109 QGARLAGAPVRIEFSKGDKASGSSMDDRYTQHADERHSIEHGRKRHLSPENTIDKYKRNR 168
Query: 93 PAKPSKHLWVG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEA 149
P +PS+ LW+G G+ V + L E F FG + AFV+Y+ + A A
Sbjct: 169 PMEPSEVLWIGFPPGLK--VDEALLWEAFSPFGKVLRVTTFPGRTYAFVQYTSIAAACRA 226
Query: 150 LKNINGRQIGGEQLRVDFLRSQ 171
+ + G+ ++ + F R++
Sbjct: 227 KEALQGKLFNNSRVSICFSRNE 248
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVG---NLSADTTDADLKELFGKFGALDKVTTYSSRSFAF 60
P + ++ ++ PS LW+G L D +A L E F FG + +VTT+ R++AF
Sbjct: 157 PENTIDKYKRNRPMEPSEVLWIGFPPGLKVD--EALLWEAFSPFGKVLRVTTFPGRTYAF 214
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFAR 92
V + + A AK+ALQG F + + I F+R
Sbjct: 215 VQYTSIAAACRAKEALQGKLFNNSRVSICFSR 246
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 218 GPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
PPS+ LWVG PSV + L + G+IE + P RN++FV F +A A
Sbjct: 49 APPSRHLWVGGLAPSVTASD--LSELFLRCGDIEDVARQPGRNFAFVSFLREGDAVAAVR 106
Query: 277 GLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQ--IRP-SQLDMLGP 333
LQG + I FS + A G Y+ R + G + + P + +D
Sbjct: 107 ELQGARLAGAPVRIEFSKGDKASGSSMDDRYTQHADERHSIEHGRKRHLSPENTIDKYKR 166
Query: 334 NQSMQPN 340
N+ M+P+
Sbjct: 167 NRPMEPS 173
>gi|414884933|tpg|DAA60947.1| TPA: hypothetical protein ZEAMMB73_205486 [Zea mays]
Length = 1015
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 506 IDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFD 565
+ ++ W G IAKGGTP+CRARC P GK + LPE ++C+ART LDML+KHY +A G
Sbjct: 500 LKDEWKWNGTIAKGGTPICRARCFPVGKVLNFMLPEFLDCTARTSLDMLSKHYYQATGSW 559
Query: 566 IVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERL 625
+VFF+P+++ D +Y +F+ YLG K RA V K + +TLFLVPPSDF +VL+V G +
Sbjct: 560 VVFFVPENDADMTAYNDFMSYLGDKQRAAVCKLGESSTLFLVPPSDFSEQVLRVPGNVSI 619
Query: 626 YGVVLKLPQ 634
GV+L+ Q
Sbjct: 620 SGVILRFQQ 628
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 122/209 (58%), Gaps = 11/209 (5%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
A PS+HLWVGG++ +V+ +L E FL+ G++E N AFV + R DA A++ +
Sbjct: 50 APPSRHLWVGGLAPSVTASDLSELFLRCGDVEGVAREPGRNFAFVSFLREGDAVAAVREL 109
Query: 154 NGRQIGGEQLRVDFLR----SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
G ++ G +R++F + S S +++ D R GR S ++ K
Sbjct: 110 QGARLAGAPVRIEFSKGDKASGSSMDDRYMQRADERHSIERGRKRQPSPENTIDKHK--- 166
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
RNR PS +LW+G+PP +++DE +L A FG++ R+ ++P R Y+FV++ S+
Sbjct: 167 ----RNRSTDPSDVLWIGFPPGLKVDETLLWEAFSPFGKVLRVTTFPGRTYAFVQYTSIA 222
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSELA 298
A RAKE LQG+LFN+PR++I FS +E A
Sbjct: 223 AACRAKEALQGKLFNNPRVSICFSRNEGA 251
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 49/202 (24%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
APPS +LWVG L+ T +DL ELF + G ++ V R+FAFV F R DA AA L
Sbjct: 50 APPSRHLWVGGLAPSVTASDLSELFLRCGDVEGVAREPGRNFAFVSFLREGDAVAAVREL 109
Query: 77 QGSDFRGNPIKIEFA--------------------------------------------R 92
QG+ G P++IEF+ R
Sbjct: 110 QGARLAGAPVRIEFSKGDKASGSSMDDRYMQRADERHSIERGRKRQPSPENTIDKHKRNR 169
Query: 93 PAKPSKHLWVG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEA 149
PS LW+G G+ V + L E F FG + AFV+Y+ + A A
Sbjct: 170 STDPSDVLWIGFPPGLK--VDETLLWEAFSPFGKVLRVTTFPGRTYAFVQYTSIAAACRA 227
Query: 150 LKNINGRQIGGEQLRVDFLRSQ 171
+ + G+ ++ + F R++
Sbjct: 228 KEALQGKLFNNPRVSICFSRNE 249
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 7 KFNRAYDDKEAPPSSNLWVG---NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYF 63
K NR+ D PS LW+G L D T L E F FG + +VTT+ R++AFV +
Sbjct: 166 KRNRSTD-----PSDVLWIGFPPGLKVDETL--LWEAFSPFGKVLRVTTFPGRTYAFVQY 218
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEFAR 92
+ A AK+ALQG F + I F+R
Sbjct: 219 TSIAAACRAKEALQGKLFNNPRVSICFSR 247
>gi|115478432|ref|NP_001062811.1| Os09g0298700 [Oryza sativa Japonica Group]
gi|50725522|dbj|BAD32991.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113631044|dbj|BAF24725.1| Os09g0298700 [Oryza sativa Japonica Group]
gi|222641269|gb|EEE69401.1| hypothetical protein OsJ_28759 [Oryza sativa Japonica Group]
Length = 1005
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 506 IDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFD 565
+ ++ W G IAKGGTP+CRARC P GK + LPE ++C+ART L+ML+KHY +A
Sbjct: 492 LKEEWKWDGTIAKGGTPICRARCFPVGKVLNFMLPEFLDCTARTSLEMLSKHYYQAASSW 551
Query: 566 IVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERL 625
+VFF+P+++ D A+Y EF+ YLG K RA V K + ++LFLVPPSDF +VL+V G +
Sbjct: 552 VVFFVPENDADMAAYNEFMNYLGDKQRAAVCKLGERSSLFLVPPSDFSEQVLRVPGKVSI 611
Query: 626 YGVVLKLPQ 634
GV+LK Q
Sbjct: 612 SGVILKFEQ 620
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
A PS+HLWVG +S V+ +L E FL+ G++E + AFV ++R EDA A++ +
Sbjct: 45 APPSRHLWVGSLSPGVAAADLSELFLRCGDVEGISRDPGRSFAFVTFAREEDAVAAVREL 104
Query: 154 NGRQIGGEQLRVDFLRSQPSRR----EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
G + G +R++F + +++ D R GR S S K
Sbjct: 105 QGIHLRGAPIRIEFSKGDKGSSSSMDDRYSQHADQRRFTERGRNQQSSPEKSTDKSK--- 161
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
R+R PS++LW+G+P +++DE L A FGE+ +I ++P R Y+FV++ ++
Sbjct: 162 ----RSRPAEPSEVLWIGFPVGLKVDEATLWEAFSPFGEVVKITTFPGRTYAFVQYTTIA 217
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSE 296
A RAKE LQG +FN+PR++I FS S+
Sbjct: 218 AACRAKETLQGNIFNNPRVSICFSRSD 244
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 94/220 (42%), Gaps = 55/220 (25%)
Query: 6 SKFNRAYDDKE----------APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS 55
S+F+ A DD APPS +LWVG+LS ADL ELF + G ++ ++
Sbjct: 24 SRFSAARDDPPPRRSSSGWGVAPPSRHLWVGSLSPGVAAADLSELFLRCGDVEGISRDPG 83
Query: 56 RSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEF------------------------- 90
RSFAFV F R EDA AA LQG RG PI+IEF
Sbjct: 84 RSFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEFSKGDKGSSSSMDDRYSQHADQRRFT 143
Query: 91 -------------------ARPAKPSKHLWVG-GISQTVSKEELEEGFLKFGNIEDFKFL 130
+RPA+PS+ LW+G + V + L E F FG +
Sbjct: 144 ERGRNQQSSPEKSTDKSKRSRPAEPSEVLWIGFPVGLKVDEATLWEAFSPFGEVVKITTF 203
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
AFV+Y+ + A A + + G ++ + F RS
Sbjct: 204 PGRTYAFVQYTTIAAACRAKETLQGNIFNNPRVSICFSRS 243
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVG-NLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVY 62
P +++ + A PS LW+G + +A L E F FG + K+TT+ R++AFV
Sbjct: 153 PEKSTDKSKRSRPAEPSEVLWIGFPVGLKVDEATLWEAFSPFGEVVKITTFPGRTYAFVQ 212
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFAR 92
+ + A AK+ LQG+ F + I F+R
Sbjct: 213 YTTIAAACRAKETLQGNIFNNPRVSICFSR 242
>gi|218201874|gb|EEC84301.1| hypothetical protein OsI_30787 [Oryza sativa Indica Group]
Length = 1005
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 91/129 (70%)
Query: 506 IDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFD 565
+ ++ W G IAKGGTP+CRARC P GK + LPE ++C+ART L+ML+KHY +A
Sbjct: 492 LKEEWKWDGTIAKGGTPICRARCFPVGKVLNFMLPEFLDCTARTSLEMLSKHYYQAASSW 551
Query: 566 IVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERL 625
+VFF+P+++ D A+Y EF+ YLG K RA V K + ++LFLVPPSDF +VL+V G +
Sbjct: 552 VVFFVPENDADMAAYNEFMNYLGDKQRAAVCKLGERSSLFLVPPSDFSEQVLRVPGKVSI 611
Query: 626 YGVVLKLPQ 634
GV+LK Q
Sbjct: 612 SGVILKFEQ 620
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
A PS+HLWVG +S V+ +L E FL+ G++E + AFV ++R EDA A++ +
Sbjct: 45 APPSRHLWVGSLSPGVAAADLSELFLRCGDVEGISRDPGRSFAFVTFAREEDAVAAVREL 104
Query: 154 NGRQIGGEQLRVDFLRSQPSRR----EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
G + G +R++F + +++ D R GR S S K
Sbjct: 105 QGIHLRGAPIRIEFSKGDKGSSSSMDDRYSQHADQRRFTERGRNQQSSPEKSTDKSK--- 161
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
R+R PS++LW+G+P +++DE L A FGE+ +I ++P R Y+FV++ ++
Sbjct: 162 ----RSRPAEPSEVLWIGFPVGLKVDEATLWEAFSPFGEVVKITTFPGRTYAFVQYTTIA 217
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSE 296
A RAKE LQG LFN+PR++I FS S+
Sbjct: 218 AACRAKETLQGNLFNNPRVSICFSRSD 244
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 94/220 (42%), Gaps = 55/220 (25%)
Query: 6 SKFNRAYDDKE----------APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS 55
S+F+ A DD APPS +LWVG+LS ADL ELF + G ++ ++
Sbjct: 24 SRFSAARDDPPPRRSSSGWGVAPPSRHLWVGSLSPGVAAADLSELFLRCGDVEGISRDPG 83
Query: 56 RSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEF------------------------- 90
RSFAFV F R EDA AA LQG RG PI+IEF
Sbjct: 84 RSFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEFSKGDKGSSSSMDDRYSQHADQRRFT 143
Query: 91 -------------------ARPAKPSKHLWVG-GISQTVSKEELEEGFLKFGNIEDFKFL 130
+RPA+PS+ LW+G + V + L E F FG +
Sbjct: 144 ERGRNQQSSPEKSTDKSKRSRPAEPSEVLWIGFPVGLKVDEATLWEAFSPFGEVVKITTF 203
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
AFV+Y+ + A A + + G ++ + F RS
Sbjct: 204 PGRTYAFVQYTTIAAACRAKETLQGNLFNNPRVSICFSRS 243
>gi|326504492|dbj|BAJ91078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1019
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 509 DFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVF 568
++ W G IAKGGTP+CRARC P GK + LP+ ++C+ART L+ML+KHY EA +VF
Sbjct: 508 EWSWNGTIAKGGTPICRARCFPVGKVLNFMLPDFLDCTARTNLEMLSKHYYEAASSWVVF 567
Query: 569 FLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGV 628
F+P+++ D A+Y +F+ YLG K RA V K + +TLFLVPPSDF VL+V G + GV
Sbjct: 568 FVPENDADMAAYNDFMNYLGDKQRAAVCKLGERSTLFLVPPSDFSEHVLRVPGKVSISGV 627
Query: 629 VLKLPQQA 636
+LK QQA
Sbjct: 628 ILKF-QQA 634
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 119/210 (56%), Gaps = 17/210 (8%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
A PS+HLWVG + V+ +L + F + G+IE N AFV + R +DA A++ +
Sbjct: 50 APPSRHLWVGSLGPGVTASDLSQLFHRCGDIEGITRDPGRNFAFVNFMREQDAVAAVREL 109
Query: 154 NGRQIGGEQLRVDFLRSQPSR----REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
G ++ G LR++F + S +++ S D R GR +S P+
Sbjct: 110 QGTRLHGVPLRIEFSKGDKSSGSYVDDRYAQSADERHFVAHGRK----------HQSSPE 159
Query: 210 SSVG---RNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFR 266
S+ RN+ PS++LW+G+P V++DE L A FGEI +I ++P R Y FV++
Sbjct: 160 KSIDKSKRNKSTEPSEVLWIGFPAGVKVDEAALWEAFSPFGEIVKITTFPGRTYGFVKYT 219
Query: 267 SVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
++ EA RAKE LQGRLFN+PR++I FS +E
Sbjct: 220 TITEACRAKEALQGRLFNNPRVSICFSRNE 249
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 49/215 (22%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYF 63
PP R+ APPS +LWVG+L T +DL +LF + G ++ +T R+FAFV F
Sbjct: 37 PPPTPRRSSGWGVAPPSRHLWVGSLGPGVTASDLSQLFHRCGDIEGITRDPGRNFAFVNF 96
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEFAR------------------------------- 92
R +DA AA LQG+ G P++IEF++
Sbjct: 97 MREQDAVAAVRELQGTRLHGVPLRIEFSKGDKSSGSYVDDRYAQSADERHFVAHGRKHQS 156
Query: 93 -PAK------------PSKHLWVG---GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
P K PS+ LW+G G+ V + L E F FG I
Sbjct: 157 SPEKSIDKSKRNKSTEPSEVLWIGFPAGVK--VDEAALWEAFSPFGEIVKITTFPGRTYG 214
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
FV+Y+ + +A A + + GR ++ + F R++
Sbjct: 215 FVKYTTITEACRAKEALQGRLFNNPRVSICFSRNE 249
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 218 GPPSKILWVG-YPPSVQMDE--QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
PPS+ LWVG P V + Q+ H G+IE I P RN++FV F +A A
Sbjct: 50 APPSRHLWVGSLGPGVTASDLSQLFHRC----GDIEGITRDPGRNFAFVNFMREQDAVAA 105
Query: 275 KEGLQGRLFNDPRITIMFSSSELAPG 300
LQG + + I FS + + G
Sbjct: 106 VRELQGTRLHGVPLRIEFSKGDKSSG 131
>gi|62318594|dbj|BAD95007.1| hypothetical protein [Arabidopsis thaliana]
Length = 130
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 67/87 (77%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
D S+NLWVG+L+ +TT++DL ELFG++G +D++T YSSR FAF+Y++ VE+A AAK
Sbjct: 11 DDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAK 70
Query: 74 DALQGSDFRGNPIKIEFARPAKPSKHL 100
+ALQG++ G+ IKIE+ARP +L
Sbjct: 71 EALQGANLNGSQIKIEYARPVCSYLYL 97
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 218 GPPSKILWVG--YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAK 275
G S LWVG P + + D L +G+I+RI Y SR ++F+ +R V+EA AK
Sbjct: 14 GFQSNNLWVGSLTPETTESDLTELFGR---YGDIDRITVYSSRGFAFIYYRHVEEAVAAK 70
Query: 276 EGLQGRLFNDPRITIMFS 293
E LQG N +I I ++
Sbjct: 71 EALQGANLNGSQIKIEYA 88
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR 156
S +LWVG ++ ++ +L E F ++G+I+ AF+ Y +E+A A + + G
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 157 QIGGEQLRVDFLR 169
+ G Q+++++ R
Sbjct: 77 NLNGSQIKIEYAR 89
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 38/280 (13%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK---VTTYSSRSFAFVYFKRVEDAKA 71
+EA P + L+VGNL T+ L LFG+ GA+ + SS +AF+ + + A+
Sbjct: 3 EEAYPKT-LYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYANHQSAQT 61
Query: 72 AKDALQGSDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGN 123
A A+ F IK+ +A P K H++VG +S + E L E F FG
Sbjct: 62 ALAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGE 121
Query: 124 IEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQ 177
I + + ++D T AFV + + +A A++ +NG+ +G +R ++ +P
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKP----- 176
Query: 178 WPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQ 237
P + G G+ GF + + N GP + ++ G P+ +++
Sbjct: 177 -PAPRENIKGIKSGKTPGFEEIY--------------NNTGPTNTTVYCGGFPANAINDM 221
Query: 238 MLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEG 277
++H LFG+I+ ++ + + Y+F++F + + A RA EG
Sbjct: 222 LIHKHFGLFGQIQDVRVFKDKGYAFIKFNNKESAARAIEG 261
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T SR +AFV F + +A+ A
Sbjct: 97 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQM 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKPSKHL-------------------------WVGGI-SQ 107
+ G I+ ++ +P P +++ + GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRENIKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPAN 216
Query: 108 TVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I+D + KD AF++++ E AA A++ + +I G ++
Sbjct: 217 AINDMLIHKHFGLFGQIQDVRVFKDKGYAFIKFNNKESAARAIEGTHNSEIQGYAVKC 274
>gi|328774281|gb|EGF84318.1| hypothetical protein BATDEDRAFT_34237 [Batrachochytrium
dendrobatidis JAM81]
Length = 1281
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
PS +LWVGN+ A + ADL +F FG ++ + + AF+ F +EDA A+ + G
Sbjct: 463 PSRSLWVGNIDALMSSADLHVIFSPFGLIESIRMLPEKECAFINFMNIEDAVVARQQMHG 522
Query: 79 SDFRGNPIKIEFARP---------AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
R N ++ F + +P+K +W+G IS T + LE F FG +E +
Sbjct: 523 GRIRNNIVRAGFGKSDPGTTEVHGTQPTKSIWIGNISPTTNPAALEGIFSCFGQVESARV 582
Query: 130 LKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
L N FV + ++DA A +N + IGG +++ F +
Sbjct: 583 LTHKNCGFVNFVHVQDAIRARNEMNNQDIGGFVVKIGFAK 622
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 41/208 (19%)
Query: 74 DALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDG 133
DA G D GN + PS+ LWVG I +S +L F FG IE + L +
Sbjct: 443 DAASGQD--GNSEDFSYQEMHVPSRSLWVGNIDALMSSADLHVIFSPFGLIESIRMLPEK 500
Query: 134 NTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRG 193
AF+ + +EDA A + ++G +I +R F +S P
Sbjct: 501 ECAFINFMNIEDAVVARQQMHGGRIRNNIVRAGFGKSDP--------------------- 539
Query: 194 TGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIK 253
G ++ H P+K +W+G S + L FG++E +
Sbjct: 540 -GTTEVHGTQ----------------PTKSIWIGN-ISPTTNPAALEGIFSCFGQVESAR 581
Query: 254 SYPSRNYSFVEFRSVDEARRAKEGLQGR 281
+N FV F V +A RA+ + +
Sbjct: 582 VLTHKNCGFVNFVHVQDAIRARNEMNNQ 609
>gi|348537600|ref|XP_003456281.1| PREDICTED: putative RNA-binding protein 15B-like [Oreochromis
niloticus]
Length = 909
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 12/171 (7%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-DKVTTYSSR----SFAFVYFKRVE 67
DD+ A +SNL++GNL + T+A+L+ F K+G + D V SR ++AFV F+ ++
Sbjct: 331 DDQRA--TSNLFIGNLDGNVTEAELRRGFDKYGIIEDVVIKRPSRGQGGAYAFVKFQNLD 388
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+QG GNPIKI + + A P+ LWVGG+ S L F +FG+I +
Sbjct: 389 MAHRAKVAMQGRLIGGNPIKIGYGK-ANPTTRLWVGGLGPGNSLAALAREFDRFGSIRNI 447
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQ--PSR 174
++K + A+++Y L+ A A + G +GG +LRVDF + + PSR
Sbjct: 448 DYVKGDSFAYIQYESLDAAQAACTQMRGFPLGGPERRLRVDFAKVEESPSR 498
>gi|328865219|gb|EGG13605.1| hypothetical protein DFA_11366 [Dictyostelium fasciculatum]
Length = 620
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 8 FNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
F+R++ P+ +W GN DTT+ +++ LFG +G + V R F+F+ F +
Sbjct: 107 FDRSF---VGAPTKVIWAGNTHPDTTEEEVRGLFGPYGFVKTVKIVPQRRFSFITFADIN 163
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAK------------PSKHLWVGGISQTVSKEELE 115
+ A+ L G RG P+K+ F +P + P K+LWVG ++ V++++L
Sbjct: 164 ASVQAQQELNGYMHRGMPLKLGFGKPDRNEPSAPVDTTNPPCKNLWVGNVAAAVTEDQLR 223
Query: 116 EGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+ F +FG +E+ + L + AFV ++ ++ A A N+ G+ + G L ++F R
Sbjct: 224 DVFEQFGKVENVRILVGRSCAFVNFTCIDHAMAAKNNLQGKPVQGYNLTINFRR 277
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P+K +W G ++EE+ F +G ++ K + +F+ ++ + + +A + +NG
Sbjct: 115 PTKVIWAGNTHPDTTEEEVRGLFGPYGFVKTVKIVPQRRFSFITFADINASVQAQQELNG 174
Query: 156 RQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRN 215
G L++ F +P R E P + V +
Sbjct: 175 YMHRGMPLKLGF--GKPDRNE-------------------------------PSAPV--D 199
Query: 216 RDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAK 275
PP K LWVG + ++Q L + FG++E ++ R+ +FV F +D A AK
Sbjct: 200 TTNPPCKNLWVGNVAAAVTEDQ-LRDVFEQFGKVENVRILVGRSCAFVNFTCIDHAMAAK 258
Query: 276 EGLQGRLFNDPRITIMFSSSELAPGK 301
LQG+ +TI F GK
Sbjct: 259 NNLQGKPVQGYNLTINFRRESDGDGK 284
>gi|167621548|ref|NP_001108062.1| RNA binding motif protein 15B [Danio rerio]
gi|160773467|gb|AAI55335.1| Zgc:175165 protein [Danio rerio]
Length = 402
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL + T+ +L++ F K+G +++V ++AF+ F+ ++
Sbjct: 35 DDQRA--TRNLFIGNLDHNITEVELRQGFDKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 92
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+QG GNPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 93 MAHRAKVAMQGRMINGNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 151
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
++K N A++ Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 152 DYVKGDNFAYIHYESLDAAQAACAQMRGFPLGGPSRRLRVDFAKAEETR 200
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 24/134 (17%)
Query: 47 LDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGIS 106
LD T R+ A+ Y ED K D + +++L++G +
Sbjct: 9 LDYYTALEERTRAYAYQLPEEDLKPEDDQ-------------------RATRNLFIGNLD 49
Query: 107 QTVSKEELEEGFLKFGNIEDFKFLK-----DGNTAFVEYSRLEDAAEALKNINGRQIGGE 161
+++ EL +GF K+G IE+ + G AF+++ L+ A A + GR I G
Sbjct: 50 HNITEVELRQGFDKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKVAMQGRMINGN 109
Query: 162 QLRVDFLRSQPSRR 175
+++ + ++ P+ R
Sbjct: 110 PIKIGYGKANPTTR 123
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 42/284 (14%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDA 69
D E P + L+VGNLS D T+A + ELFG+ G V T + FV F A
Sbjct: 2 DDEQPKT--LYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHA 59
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFG 122
A A+ G G +K+ +A K H++VG +S ++ ++++ F FG
Sbjct: 60 TATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFG 119
Query: 123 NIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P+ +
Sbjct: 120 KISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPK- 178
Query: 177 QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
+ N S+ + V N+ P + ++ G + + E
Sbjct: 179 --------------------TTNESSSSKQLSFDEV-VNQSSPSNCTVYCG-GVTTGLTE 216
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
Q++ FG+I I+ +P + YSFV F S + A A + G
Sbjct: 217 QIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNG 260
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS + T D+K F FG + + T S+ + FV F D
Sbjct: 89 KDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWD 148
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPA-------KPSKHL----------------WVG 103
A+ A + G G I+ +A +PA SK L + G
Sbjct: 149 AENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYCG 208
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
G++ ++++ + + F FG I + + + +FV ++ E AA A+ ++NG I G +
Sbjct: 209 GVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVV 268
Query: 164 RV 165
+
Sbjct: 269 KC 270
>gi|66800585|ref|XP_629218.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
gi|60462622|gb|EAL60825.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
Length = 691
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 22/178 (12%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ +W GN++ ++T+ +++ LF +FG L + ++ AF+ F V A A+ L G
Sbjct: 175 PTKIVWAGNINPESTEEEVRHLFSQFGYLQAIKIIPNKQCAFITFADVNCAIQAQFNLNG 234
Query: 79 SDFRGNPIKIEFAR----------------------PAKPSKHLWVGGISQTVSKEELEE 116
+ FRG P+K+ F + P+K+LW+G ++ VS E L++
Sbjct: 235 TIFRGLPLKLGFGKVENAPQANFGGGRFDQYNKPHQEETPTKNLWLGNVNSNVSYELLKQ 294
Query: 117 GFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
F +FGN++ + L AFV + +E AA A +NG + G L+++F + + SR
Sbjct: 295 IFDQFGNVDTIRILHGRGCAFVNFFTVESAAAARNGLNGTMVCGMPLKINFRKEEDSR 352
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+E P+ NLW+GN++++ + LK++F +FG +D + R AFV F VE A AA++
Sbjct: 270 QEETPTKNLWLGNVNSNVSYELLKQIFDQFGNVDTIRILHGRGCAFVNFFTVESAAAARN 329
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHL 100
L G+ G P+KI F R + S+H+
Sbjct: 330 GLNGTMVCGMPLKINF-RKEEDSRHI 354
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 26/202 (12%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNIN 154
+P+K +W G I+ ++EE+ F +FG ++ K + + AF+ ++ + A +A N+N
Sbjct: 174 EPTKIVWAGNINPESTEEEVRHLFSQFGYLQAIKIIPNKQCAFITFADVNCAIQAQFNLN 233
Query: 155 GRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR 214
G G L++ F + + P G G D Y + H + +
Sbjct: 234 GTIFRGLPLKLGFGK--------------VENAPQANFGGGRFD---QYNKPHQEET--- 273
Query: 215 NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
P+K LW+G S + ++L FG ++ I+ R +FV F +V+ A A
Sbjct: 274 -----PTKNLWLGNVNS-NVSYELLKQIFDQFGNVDTIRILHGRGCAFVNFFTVESAAAA 327
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
+ GL G + + I F E
Sbjct: 328 RNGLNGTMVCGMPLKINFRKEE 349
>gi|440801020|gb|ELR22045.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1256
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 14 DKEAPPSSNLWVGNLSADT-TDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
+K PPS +LWVGN AD TD DL+ FG FG ++ V ++++ FV F E A A
Sbjct: 267 NKNFPPSRHLWVGN--ADRFTDRDLRTAFGAFGDIESVELLPTKAYGFVNFYAKESAVQA 324
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
K+ L G +G + + + +PS+ +W G ++ +S E+L + F +G + + F+
Sbjct: 325 KEKLHGVMLKGCRLLVHYGE-TRPSRFVWAGPLTPDISLEKLNQTFSAYGAVRNIAFIPA 383
Query: 133 GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ A VE+ L++A +A K +NGR I L V +
Sbjct: 384 SDYAVVEFQILQEAVQAKKRLNGRMIENCCLTVGY 418
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 53/220 (24%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG + ++ L F FG+IE + L FV + E A +A + ++G
Sbjct: 272 PSRHLWVGNADRFTDRD-LRTAFGAFGDIESVELLPTKAYGFVNFYAKESAVQAKEKLHG 330
Query: 156 RQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRN 215
+ G +L V + G
Sbjct: 331 VMLKGCRLLVHY---------------------------------------------GET 345
Query: 216 RDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAK 275
R PS+ +W G P + + + L+ +G + I P+ +Y+ VEF+ + EA +AK
Sbjct: 346 R---PSRFVWAG-PLTPDISLEKLNQTFSAYGAVRNIAFIPASDYAVVEFQILQEAVQAK 401
Query: 276 EGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRS 315
+ L GR+ + +T+ + P P +G + PRS
Sbjct: 402 KRLNGRMIENCCLTVGYGEY---PEGHRPDRPAGGRAPRS 438
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 39/266 (14%)
Query: 6 SKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS---FAFVY 62
SK +R + EAP + L D T A++++ F +FG +D V A V
Sbjct: 479 SKRSRGFG--EAPTETRHLKVELRGDITQAEIEKNFSRFGVVDNVVIKKLERGLRVACVD 536
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFG 122
FK A AK A+Q G I F + S+HLWVG + Q V K +L + F + G
Sbjct: 537 FKNPRVAINAKSAMQEQGKYGT---ITFWE-GEHSRHLWVGNLDQGVHKRKLWDEFSRVG 592
Query: 123 NIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
+E + AFV++ + A +A K + + + +D+ RS + Q +
Sbjct: 593 KVESVSRFP--SHAFVDFVSVRSAEKAHKYL-------QCVTLDYARSDSVKERQRKENT 643
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD---EQML 239
A TG D +R +++ +D + G+ P D E L
Sbjct: 644 KA---------TGRQDR----RRRECEANSNNAQD-----VYIEGFAPDYAFDYRCEGEL 685
Query: 240 HNAMILFGEIERIKSYPSRNYSFVEF 265
+ G I IK YP RN++ + F
Sbjct: 686 REELDRIGPIREIKFYPKRNFAHIIF 711
Score = 57.0 bits (136), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
GRN++ PPS+ LWVG + + ++ L A FG+IE ++ P++ Y FV F + + A
Sbjct: 265 GRNKNFPPSRHLWVGN--ADRFTDRDLRTAFGAFGDIESVELLPTKAYGFVNFYAKESAV 322
Query: 273 RAKEGLQGRLFNDPRITIMFSSS 295
+AKE L G + R+ + + +
Sbjct: 323 QAKEKLHGVMLKGCRLLVHYGET 345
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 38/279 (13%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDK---VTTYSSRSFAFVYFKRVEDAKAA 72
EA P + L+VGNL T+ L LFG+ GA+ + SS +AF+ + + A+ A
Sbjct: 4 EAYPKT-LYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQTA 62
Query: 73 KDALQGSDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNI 124
A+ F IK+ +A P K H++VG +S + E L E F FG I
Sbjct: 63 LAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEI 122
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
+ + ++D T AFV + + +A A++ +NG+ +G +R ++ +P
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKP------ 176
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
P + G G+ GF + + N GP + ++ G P + + +
Sbjct: 177 PAPRENTKGIKSGKTPGFEEIY--------------NNTGPTNTTVYCGGFPPNTISDNL 222
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEG 277
+ FG I ++ + + Y+F++F S + A RA EG
Sbjct: 223 IKTHFGQFGSIHDVRVFKDKGYAFIKFISKEAAARAIEG 261
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + +A+ A
Sbjct: 97 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQM 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKPSKH-------------------------LWVGGIS-Q 107
+ G I+ ++ +P P ++ ++ GG
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRENTKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPPN 216
Query: 108 TVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
T+S ++ F +FG+I D + KD AF+++ E AA A++ + ++ G ++
Sbjct: 217 TISDNLIKTHFGQFGSIHDVRVFKDKGYAFIKFISKEAAARAIEGTHNSEVQGHPVKC 274
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 8 FNRAYDDKEAPPSSNLWVGNLSADT-TDADLKELFGKFGALDKVTTYSSRSFAFVYFKRV 66
F Y++ P ++ ++ G +T +D +K FG+FG++ V + + +AF+ F
Sbjct: 194 FEEIYNNT-GPTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKDKGYAFIKFISK 252
Query: 67 EDAKAAKDALQGSDFRGNPIKIEFAR 92
E A A + S+ +G+P+K + +
Sbjct: 253 EAAARAIEGTHNSEVQGHPVKCYWGK 278
>gi|224065811|ref|XP_002190221.1| PREDICTED: putative RNA-binding protein 15B [Taeniopygia guttata]
Length = 652
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 10/172 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL + ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 99 DDQRA--TRNLFIGNLDHNVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 156
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ + S L F +FG+I
Sbjct: 157 MAHRAKVAMSGRVVGRNPIKIGYGK-ANPTTRLWVGGLGPSTSLAALAREFDRFGSIRTI 215
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQ 177
++K + A+++Y L+ A A + G +GG +LRVDF +++ +R Q
Sbjct: 216 DYVKGDSFAYIQYESLDAAQAACAQMRGFPLGGPERRLRVDFAKAEETRYPQ 267
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 42/284 (14%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDA 69
D + P + L+VGNLS D T+A + ELFG+ G V T + FV F A
Sbjct: 2 DDDQPKT--LYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHA 59
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFG 122
A A+ G G +K+ +A K H++VG +S ++ ++++ F FG
Sbjct: 60 TATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFG 119
Query: 123 NIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P+ +
Sbjct: 120 KISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKT 179
Query: 177 QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
S+ + + S + N+ P + ++ G + + E
Sbjct: 180 T-------------------SETTNTKQLSFDEVV---NQSSPSNCTVYCG-GVTTGLTE 216
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
Q++ FG+I I+ +P + YSFV F S + A A + G
Sbjct: 217 QIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNG 260
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS + T D+K F FG + + T S+ + FV F D
Sbjct: 89 KDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWD 148
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPA----------------------KPSKH-LWVG 103
A+ A + G G I+ +A +PA PS ++ G
Sbjct: 149 AENAIQQMGGQWLGGRQIRTNWATRKPAPKTTSETTNTKQLSFDEVVNQSSPSNCTVYCG 208
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
G++ ++++ + + F FG I + + + +FV ++ E AA A+ ++NG I G +
Sbjct: 209 GVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVV 268
Query: 164 RV 165
+
Sbjct: 269 KC 270
>gi|330812809|ref|XP_003291310.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
gi|325078525|gb|EGC32172.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
Length = 587
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 25/189 (13%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
K P+ +W GN+ D+++ +++ LF +FG + + ++ AF+ F V A AA+
Sbjct: 111 KPTEPTKIVWAGNVHPDSSEDEIRGLFSQFGYIQAIKIIPAKQCAFITFGDVNAAIAAQY 170
Query: 75 ALQGSDFRGNPIKIEFAR----PAK---------------------PSKHLWVGGISQTV 109
L G+ RG P+K+ F + PA P+K+LW+G I +V
Sbjct: 171 NLNGTPIRGYPLKLGFGKVENAPAAFQQQQQQPHFNKPPHHLQEEVPTKNLWLGNIGPSV 230
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+ E L++ F +FGN+++ + L AFV + +E A A N+ G + G L+++F +
Sbjct: 231 TSETLKQLFDQFGNVDNIRILVGRGCAFVNFFTVESAIAARNNLTGTMVCGMPLKINFRK 290
Query: 170 SQPSRREQW 178
S + ++
Sbjct: 291 EDESYKSRF 299
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 25/203 (12%)
Query: 91 ARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEAL 150
+P +P+K +W G + S++E+ F +FG I+ K + AF+ + + A A
Sbjct: 110 GKPTEPTKIVWAGNVHPDSSEDEIRGLFSQFGYIQAIKIIPAKQCAFITFGDVNAAIAAQ 169
Query: 151 KNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS 210
N+NG I G L++ F G + F + P
Sbjct: 170 YNLNGTPIRGYPLKLGF-------------------GKVENAPAAFQQQQQQPHFNKPPH 210
Query: 211 SVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
+ ++ P+K LW+G PSV + L FG ++ I+ R +FV F +V+
Sbjct: 211 HL---QEEVPTKNLWLGNIGPSV--TSETLKQLFDQFGNVDNIRILVGRGCAFVNFFTVE 265
Query: 270 EARRAKEGLQGRLFNDPRITIMF 292
A A+ L G + + I F
Sbjct: 266 SAIAARNNLTGTMVCGMPLKINF 288
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 39/273 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS---FAFVYFKRVEDAKAAKDALQGS 79
L+VGNL T+ L LF + G + S FAF+ + + A+ A A+
Sbjct: 10 LYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTALAAMNKR 69
Query: 80 DFRGNPIKIEFARPA--KPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F I++ +A A +P H++VG +S + E L E F FG I + + ++
Sbjct: 70 MFLKKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHDA 184
D T AFV + + +A A+ +NG+ +G +R ++ R P+ RE NS
Sbjct: 130 DPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRE---NSKGI 186
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
+ G + GF + Y + P ++ + G+PP+ DE ++
Sbjct: 187 KSG----KTPGFEE---IYNNTSPTNTT----------VYCGGFPPNAITDE-LIQKHFA 228
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEG 277
FG I + + + Y+F+ F S + A RA EG
Sbjct: 229 QFGHINDTRVFKDKGYAFIRFASKESAARAIEG 261
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T SR +AFV F + +A+ A
Sbjct: 97 HIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAM 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKPSKH-------------------------LWVGGIS-Q 107
+ G I+ ++ +P P ++ ++ GG
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRENSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPN 216
Query: 108 TVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ E +++ F +FG+I D + KD AF+ ++ E AA A++ + ++ G ++
Sbjct: 217 AITDELIQKHFAQFGHINDTRVFKDKGYAFIRFASKESAARAIEGTHNSEVQGHPVKC 274
>gi|327265765|ref|XP_003217678.1| PREDICTED: putative RNA-binding protein 15B-like [Anolis
carolinensis]
Length = 913
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++A+L+ F K+G +++V ++AF+ F+ ++
Sbjct: 362 DDQRA--TRNLFIGNLDHSVSEAELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 419
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ + S L F +FG+I
Sbjct: 420 MAHRAKVAMSGRVVGRNPIKIGYGK-ANPTTRLWVGGLGPSTSLAALAREFDRFGSIRTI 478
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
++K + A+++Y L+ A A + G +GG +LRVDF +++ R
Sbjct: 479 DYVKGDSFAYIQYESLDAAQAACAQMRGFPLGGPERRLRVDFAKAEEVR 527
>gi|47206459|emb|CAF93650.1| unnamed protein product [Tetraodon nigroviridis]
Length = 602
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 86/148 (58%), Gaps = 8/148 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-DKVTTYSSR----SFAFVYFKRVE 67
DD+ A +SNL++GNL + T+A+L+ F K+G + D V +R ++AFV F+ ++
Sbjct: 182 DDQRA--TSNLFIGNLDGNVTEAELRRGFDKYGIIEDVVIKRPARGQGGAYAFVKFQNLD 239
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+QG GNPIKI + + A P+ LWVGG+ S L F +FG+I +
Sbjct: 240 MAHRAKVAMQGRLIGGNPIKIGYGK-ANPTTRLWVGGLGPGNSLAALAREFDRFGSIRNI 298
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNING 155
++K + A+++Y L+ A A + G
Sbjct: 299 DYVKGDSFAYIQYESLDAAQAACTQMRG 326
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 28/145 (19%)
Query: 36 DLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAK 95
+ + L +G LD+ R + F VED K D +
Sbjct: 149 ERERLLDYYGMLDE----RGRPYGFPPMPVVEDLKPEDDQ-------------------R 185
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK-----DGNTAFVEYSRLEDAAEAL 150
+ +L++G + V++ EL GF K+G IED + G AFV++ L+ A A
Sbjct: 186 ATSNLFIGNLDGNVTEAELRRGFDKYGIIEDVVIKRPARGQGGAYAFVKFQNLDMAHRAK 245
Query: 151 KNINGRQIGGEQLRVDFLRSQPSRR 175
+ GR IGG +++ + ++ P+ R
Sbjct: 246 VAMQGRLIGGNPIKIGYGKANPTTR 270
>gi|301612329|ref|XP_002935665.1| PREDICTED: putative RNA-binding protein 15B-like [Xenopus
(Silurana) tropicalis]
Length = 749
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD A + NL++GNL ++ DL+ F K+G +++V ++AF+ F+ ++
Sbjct: 231 DDHRA--TRNLFIGNLDHMVSEVDLRRAFDKYGPIEEVVIKRPGRGQGAAYAFLRFQNLD 288
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G N +KI + +P PS LWVGG+ S L F +FG+I
Sbjct: 289 MAHRAKLAMSGRLLGRNAMKIGYGKP-NPSTRLWVGGLGPNTSLAALAREFDRFGSIRTV 347
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
++K + A+++Y L+ A A + G +G +LRVDF P
Sbjct: 348 DYVKGDSFAYIQYESLDAAQAACTQMRGFALGDRRLRVDFATVSP 392
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 80/206 (38%), Gaps = 56/206 (27%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEA 149
+ +++L++G + VS+ +L F K+G IE+ + G AF+ + L+ A A
Sbjct: 234 RATRNLFIGNLDHMVSEVDLRRAFDKYGPIEEVVIKRPGRGQGAAYAFLRFQNLDMAHRA 293
Query: 150 LKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
++GR +G +++ + + PS R
Sbjct: 294 KLAMSGRLLGRNAMKIGYGKPNPSTR---------------------------------- 319
Query: 210 SSVGRNRDGPPSKILWV-GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSV 268
LWV G P+ + L FG I + +++++++ S+
Sbjct: 320 --------------LWVGGLGPNTSL--AALAREFDRFGSIRTVDYVKGDSFAYIQYESL 363
Query: 269 DEARRAKEGLQGRLFNDPRITIMFSS 294
D A+ A ++G D R+ + F++
Sbjct: 364 DAAQAACTQMRGFALGDRRLRVDFAT 389
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 42/284 (14%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDA 69
D E P + L+VGNLS D T+A + +LFG+ G V T + + FV F A
Sbjct: 3 DDEQPKT--LYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHA 60
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFG 122
A+ A+ G G +K+ +A K H++VG +S ++ +++ F FG
Sbjct: 61 AASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFG 120
Query: 123 NIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 121 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP---- 176
Query: 177 QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
P + H ++ QSS P + ++ G + + E
Sbjct: 177 -----------PAPKATYETNTKHLSFDEVVNQSS-------PSNCTVYCG-GVTTGLTE 217
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
Q++ FG+I ++ +P + YSFV F S + A A + G
Sbjct: 218 QLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNG 261
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS + T D++ F FG + + T S+ + FV F D
Sbjct: 90 KDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWD 149
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVG 103
A+ A + G G I+ +A +P P +KHL + G
Sbjct: 150 AENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCG 209
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
G++ ++++ + + F FG I + + D +FV ++ E AA A+ ++NG + G +
Sbjct: 210 GVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIV 269
Query: 164 RV 165
+
Sbjct: 270 KC 271
>gi|351711931|gb|EHB14850.1| Putative RNA-binding protein 15B [Heterocephalus glaber]
Length = 632
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 73 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 130
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 131 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 189
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ SR
Sbjct: 190 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEESR 238
>gi|363738498|ref|XP_003642020.1| PREDICTED: putative RNA-binding protein 15B [Gallus gallus]
Length = 783
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL + ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 230 DDQRA--TRNLFIGNLDHNVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 287
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ + S L F +FG+I
Sbjct: 288 MAHRAKVAMSGRVVGRNPIKIGYGK-ANPTTRLWVGGLGPSTSLAALAREFDRFGSIRTI 346
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
++K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 347 DYVKGDSFAYIQYESLDAAQAACAQMRGFPLGGPERRLRVDFAKAEETR 395
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 37/272 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS---FAFVYFKRVEDAKAAKDALQGS 79
L+VGNL T+ L LF + G + S +AF+ + A+ A A+
Sbjct: 10 LYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F IK+ +A P K H++VG +S + E L E F FG I + + ++
Sbjct: 70 FFLKKEIKVNWATSPGNQPKTDTSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + +A A++ +NG+ +G +R ++ +P P D
Sbjct: 130 DPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKP------PAPRDNS 183
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
G G+ GF + Y + P ++ + G+PP+ DE ++
Sbjct: 184 KGIKSGKTPGFEE---IYNNTSPTNTT----------VYCGGFPPNTITDE-LIQKHFAQ 229
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEG 277
FG+I + + + Y+F+ F + + A RA EG
Sbjct: 230 FGQIHDTRVFKDKGYAFIRFANKESAARAIEG 261
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T SR +AFV F + +A+ A
Sbjct: 97 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQM 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKPSKH-------------------------LWVGGIS-Q 107
+ G I+ ++ +P P + ++ GG
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRDNSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPN 216
Query: 108 TVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
T++ E +++ F +FG I D + KD AF+ ++ E AA A++ + ++ G ++
Sbjct: 217 TITDELIQKHFAQFGQIHDTRVFKDKGYAFIRFANKESAARAIEGTHNSEVQGHPVKC 274
>gi|301767252|ref|XP_002919030.1| PREDICTED: putative RNA-binding protein 15B-like [Ailuropoda
melanoleuca]
Length = 761
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 203 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 260
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 261 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 319
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 320 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 368
>gi|359322208|ref|XP_003639807.1| PREDICTED: putative RNA-binding protein 15B-like [Canis lupus
familiaris]
Length = 898
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 340 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 397
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 398 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 456
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 457 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 505
>gi|348581977|ref|XP_003476753.1| PREDICTED: putative RNA-binding protein 15B-like [Cavia porcellus]
Length = 891
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 332 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 389
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 390 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 448
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 449 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 497
>gi|410919661|ref|XP_003973302.1| PREDICTED: putative RNA-binding protein 15-like [Takifugu rubripes]
Length = 831
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V S ++ F+ F+ ++
Sbjct: 283 DDQRA--NRTLFLGNLDVTVTENDLRRAFARFGMITEVDIKRPVRGQSNTYGFMKFENLD 340
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G +PIKI + +P PS LWVGG+ VS L + F +FG I
Sbjct: 341 VAHRAKMAMSGKMLGHSPIKIGYGKPT-PSTRLWVGGLGPWVSLAALAKEFDRFGTIRTI 399
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQ 177
+ KD A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q
Sbjct: 400 DYTKDDVWAYIQYESLDAAQAACSHMRGFPLGGPDRRLRVDFADAEHCYQQQ 451
>gi|109485382|ref|XP_001074007.1| PREDICTED: putative RNA-binding protein 15B-like [Rattus
norvegicus]
Length = 860
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 300 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 357
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 358 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 416
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 417 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 465
>gi|311268970|ref|XP_003132286.1| PREDICTED: putative RNA-binding protein 15B-like [Sus scrofa]
Length = 893
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 334 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 391
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 392 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 450
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 451 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 499
>gi|395832707|ref|XP_003789398.1| PREDICTED: putative RNA-binding protein 15B [Otolemur garnettii]
Length = 886
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 327 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 384
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 385 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 443
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 444 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 492
>gi|241896855|ref|NP_780611.3| putative RNA-binding protein 15B [Mus musculus]
gi|229462811|sp|Q6PHZ5.2|RB15B_MOUSE RecName: Full=Putative RNA-binding protein 15B; AltName:
Full=RNA-binding motif protein 15B
Length = 887
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 327 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 384
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 385 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 443
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 444 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 492
>gi|392350333|ref|XP_236613.6| PREDICTED: putative RNA-binding protein 15B-like [Rattus
norvegicus]
Length = 887
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 327 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 384
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 385 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 443
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 444 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 492
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 41/296 (13%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDA 69
D++ P + L+VGNLS D T+A + ++F + G T + + FV F A
Sbjct: 4 DEDQPRT--LYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHA 61
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFG 122
AA A+ G G +K+ +A K H++VG +S +S +++ F FG
Sbjct: 62 AAALAAMNGRKILGKDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFG 121
Query: 123 NIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
I D + +KD T F+ + DA A++ +NG+ +GG Q+R ++ +PS
Sbjct: 122 KISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSA-- 179
Query: 177 QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
P S++ G S H +Y+ QSS P + ++ G S + +
Sbjct: 180 --PKSNNE----------GASSKHLSYEEVLNQSS-------PSNCTVYCGGIAS-GLSD 219
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
Q++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 220 QLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYW 275
>gi|402859962|ref|XP_003894405.1| PREDICTED: putative RNA-binding protein 15B [Papio anubis]
Length = 890
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 331 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 388
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 389 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 447
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 448 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 496
>gi|388454468|ref|NP_001252598.1| putative RNA-binding protein 15B [Macaca mulatta]
gi|387540072|gb|AFJ70663.1| putative RNA-binding protein 15B [Macaca mulatta]
Length = 890
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 331 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 388
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 389 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 447
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 448 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 496
>gi|441611741|ref|XP_004093062.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15B
[Nomascus leucogenys]
Length = 837
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 278 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 335
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 336 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 394
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 395 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 443
>gi|432092448|gb|ELK25063.1| Putative RNA-binding protein 15B [Myotis davidii]
Length = 649
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 88 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 145
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 146 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 204
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 205 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 253
>gi|54607124|ref|NP_037418.3| putative RNA-binding protein 15B [Homo sapiens]
gi|114587106|ref|XP_516489.2| PREDICTED: putative RNA-binding protein 15B [Pan troglodytes]
gi|229463030|sp|Q8NDT2.3|RB15B_HUMAN RecName: Full=Putative RNA-binding protein 15B; AltName:
Full=One-twenty two protein 3; Short=HuOTT3; AltName:
Full=RNA-binding motif protein 15B
gi|119585543|gb|EAW65139.1| RNA binding motif protein 15B [Homo sapiens]
gi|410220072|gb|JAA07255.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410260990|gb|JAA18461.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410288636|gb|JAA22918.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410335595|gb|JAA36744.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410335597|gb|JAA36745.1| RNA binding motif protein 15B [Pan troglodytes]
Length = 890
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 331 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 388
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 389 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 447
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 448 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 496
>gi|410951403|ref|XP_003982387.1| PREDICTED: putative RNA-binding protein 15B [Felis catus]
Length = 1145
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 587 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 644
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 645 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 703
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQ 177
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R Q
Sbjct: 704 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETRYPQ 755
>gi|384489804|gb|EIE81026.1| hypothetical protein RO3G_05731 [Rhizopus delemar RA 99-880]
Length = 699
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ- 77
PS LW+GN++ DL +LF +G ++ V S + AFV F VE A AAKD L+
Sbjct: 177 PSRALWLGNINPSLGVPDLSQLFSVYGQVESVRILSDKECAFVNFSTVEAAMAAKDDLET 236
Query: 78 --GSDFRGNPIKIEFARP-----------AKPSKHLWVGGISQTVSKEELEEGFLKFGNI 124
GS G P+++ F + P++ LWVG + V+ L+ F FG+I
Sbjct: 237 RLGSKLAGTPVRVGFGKADLAVTEVGPNSQGPTRALWVGNLPANVNATMLKNIFQAFGHI 296
Query: 125 EDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG 160
E + L N F+ + EDA A + + ++I G
Sbjct: 297 ESVRILTHKNCGFINFEHQEDAVRARRALQNKEILG 332
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 40/189 (21%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+ LW+G I+ ++ +L + F +G +E + L D AFV +S +E A A ++
Sbjct: 177 PSRALWLGNINPSLGVPDLSQLFSVYGQVESVRILSDKECAFVNFSTVEAAMAAKDDLET 236
Query: 156 R---QIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSV 212
R ++ G +RV F ++ + E PNS
Sbjct: 237 RLGSKLAGTPVRVGFGKADLAVTEVGPNSQG----------------------------- 267
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
P++ LWVG P+ ++ ML N FG IE ++ +N F+ F ++A
Sbjct: 268 -------PTRALWVGNLPA-NVNATMLKNIFQAFGHIESVRILTHKNCGFINFEHQEDAV 319
Query: 273 RAKEGLQGR 281
RA+ LQ +
Sbjct: 320 RARRALQNK 328
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 19/143 (13%)
Query: 215 NRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARR 273
N+ PS+ LW+G PS+ + + L ++G++E ++ + +FV F +V+ A
Sbjct: 172 NQSQIPSRALWLGNINPSLGVPD--LSQLFSVYGQVESVRILSDKECAFVNFSTVEAAMA 229
Query: 274 AKEGLQGRL---FNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDM 330
AK+ L+ RL + + F ++LA + P S +GP ++ G+ P+ +
Sbjct: 230 AKDDLETRLGSKLAGTPVRVGFGKADLAVTEVGPNS----QGPTRALWVGN--LPANV-- 281
Query: 331 LGPNQSMQPNNFA--GHLQPADI 351
N +M N F GH++ I
Sbjct: 282 ---NATMLKNIFQAFGHIESVRI 301
>gi|395733741|ref|XP_003776287.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15B
[Pongo abelii]
Length = 890
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 331 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 388
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 389 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 447
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 448 DHVKGDSFAYIQYESLDAAQAACAKMXGFPLGGPDRRLRVDFAKAEETR 496
>gi|281338063|gb|EFB13647.1| hypothetical protein PANDA_007613 [Ailuropoda melanoleuca]
Length = 732
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 174 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 231
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 232 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 290
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 291 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 339
>gi|148689224|gb|EDL21171.1| mCG19533 [Mus musculus]
Length = 785
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 225 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 282
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 283 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 341
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 342 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 390
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A +A A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDDVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F S + A A + G
Sbjct: 224 SPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 260
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++ + +
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Query: 171 QP 172
P
Sbjct: 276 TP 277
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 11 AYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
+YDD + +P + ++ G +++ T+ +++ F FG + ++ + + ++FV F E
Sbjct: 190 SYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 249
Query: 68 DAKAAKDALQGSDFRGNPIKIEFAR 92
A A ++ G+ G+ +K + +
Sbjct: 250 SAAHAIVSVNGTTIEGHVVKCYWGK 274
>gi|380797055|gb|AFE70403.1| putative RNA-binding protein 15B, partial [Macaca mulatta]
Length = 683
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 124 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 181
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 182 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 240
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 241 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 289
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + ++F + G V T + + FV F A A+ A+ G
Sbjct: 9 LYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++++ G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDN--HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
T + N H +++ QSS P + ++ G S + EQ++
Sbjct: 180 --------TTYESNSKHLSFEEVMSQSS-------PSNCTVYCG-GVSSGLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I ++ +P + YSFV F S + A A + G
Sbjct: 224 SAFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNG 260
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQH 155
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P SKHL + GG+S ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++ + +
Sbjct: 216 EQLMRQTFSAFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGKE 275
Query: 171 QP 172
P
Sbjct: 276 TP 277
>gi|296225323|ref|XP_002758278.1| PREDICTED: putative RNA-binding protein 15B [Callithrix jacchus]
Length = 813
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 254 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 311
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 312 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 370
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 371 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 419
>gi|126336349|ref|XP_001368088.1| PREDICTED: putative RNA-binding protein 15B-like [Monodelphis
domestica]
Length = 903
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 355 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 412
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 413 MAHRAKVAMSGRVVGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 471
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 472 DHVKGDSFAYIQYESLDAAQAACVQMRGFPLGGPERRLRVDFAKAEETR 520
>gi|395516962|ref|XP_003762652.1| PREDICTED: putative RNA-binding protein 15B [Sarcophilus harrisii]
Length = 689
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 140 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 197
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 198 MAHRAKVAMSGRVVGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 256
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 257 DHVKGDSFAYIQYESLDAAQAACVQMRGFPLGGPDRRLRVDFAKAEETR 305
>gi|156408227|ref|XP_001641758.1| predicted protein [Nematostella vectensis]
gi|156228898|gb|EDO49695.1| predicted protein [Nematostella vectensis]
Length = 599
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 28/199 (14%)
Query: 3 PPPSKFNRAYDDKE---------APP-------------SSNLWVGNLSADTTDADLKEL 40
PPP +F+R D + PP + L+VGNL + DL+
Sbjct: 94 PPPFEFDRGRGDYDRRNRGGGNFTPPQQEYIPPEEDPKATRTLFVGNLETGISCQDLRLS 153
Query: 41 FGKFGA-LDKVTTYSSR----SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAK 95
F KFG LD +R ++AFV F ++ A AK A+QG N IKI + R +
Sbjct: 154 FEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAAKAKCAMQGQCIGRNHIKIGYGRSQQ 213
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
++ LWVGG+ +S ELE F +FG I + K G+ A++ Y L+ A+ A + + G
Sbjct: 214 TTR-LWVGGLGPWISIPELEREFDRFGAIRRIDYRKGGDHAYILYDSLDAASVAAREMRG 272
Query: 156 RQIGGEQLRVDFLRSQPSR 174
Q+G +LR+DF + +R
Sbjct: 273 FQMGDRRLRIDFADKEQAR 291
>gi|431913468|gb|ELK15143.1| Putative RNA-binding protein 15B [Pteropus alecto]
Length = 562
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 4 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 61
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 62 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 120
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 121 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 169
>gi|47229632|emb|CAG06828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 804
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 10/172 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD A + L++GNL T+ DL+ F +FG + +V S ++ F+ F+ ++
Sbjct: 272 DDHRA--TRTLFLGNLDITLTENDLRRAFARFGMITEVDIKRPARGQSNTYGFIKFENLD 329
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK + G +PIKI + +P PS LWVGG+ VS L + F +FG I
Sbjct: 330 VAHRAKMVMSGKVLGHSPIKIGYGKPT-PSTRLWVGGLGPWVSLAALAKEFDRFGTIRTI 388
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQ 177
+ KD A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q
Sbjct: 389 DYAKDDVWAYIQYESLDAAQAACTHMRGFPLGGPDRRLRVDFADAEHCYQQQ 440
>gi|444513559|gb|ELV10405.1| Putative RNA-binding protein 15B [Tupaia chinensis]
Length = 564
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 4 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 61
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 62 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 120
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 121 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 169
>gi|384490609|gb|EIE81831.1| hypothetical protein RO3G_06536 [Rhizopus delemar RA 99-880]
Length = 807
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL-- 76
PS +LW+G L T ++L +F KFGA++ + R AF+ + VE+A A+D L
Sbjct: 256 PSRSLWIGQLDLALTTSELNGMFSKFGAIESIRILPDRECAFINYFGVEEALRARDVLVN 315
Query: 77 -QGSDFRGNPIKIEFARPA-------------KPSKHLWVGGISQTVSKEELEEGFLKFG 122
GS +K+ F +P +P++ LWVG I ++ L + F FG
Sbjct: 316 KMGSRLGNTIVKVGFGKPEAVPQQQLYIENVQEPTRALWVGNIPNNTTQVMLVDTFSTFG 375
Query: 123 NIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGE 161
IE + L N AF+ + +E+A A + ++ R+I G+
Sbjct: 376 TIESVRVLPHKNCAFINFFNVEEAVMAKRALHNREIMGQ 414
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 38/189 (20%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEA---LKN 152
PS+ LW+G + ++ EL F KFG IE + L D AF+ Y +E+A A L N
Sbjct: 256 PSRSLWIGQLDLALTTSELNGMFSKFGAIESIRILPDRECAFINYFGVEEALRARDVLVN 315
Query: 153 INGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSV 212
G ++G ++V F + + + PQ +
Sbjct: 316 KMGSRLGNTIVKVGFGKPE----------------------------------AVPQQQL 341
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
P++ LWVG P+ + ML + FG IE ++ P +N +F+ F +V+EA
Sbjct: 342 YIENVQEPTRALWVGNIPN-NTTQVMLVDTFSTFGTIESVRVLPHKNCAFINFFNVEEAV 400
Query: 273 RAKEGLQGR 281
AK L R
Sbjct: 401 MAKRALHNR 409
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 12 YDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
Y + P+ LWVGN+ +TT L + F FG ++ V ++ AF+ F VE+A
Sbjct: 342 YIENVQEPTRALWVGNIPNNTTQVMLVDTFSTFGTIESVRVLPHKNCAFINFFNVEEAVM 401
Query: 72 AKDALQGSDFRGN---PIKIEFAR 92
AK AL + G +K FA+
Sbjct: 402 AKRALHNREIMGQGTGAVKTGFAK 425
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 132/296 (44%), Gaps = 41/296 (13%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDA 69
D++ P + L+VGNLS D T+A + ++F + G T + + FV F A
Sbjct: 4 DEDQPRT--LYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHA 61
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFG 122
AA A+ G G +K+ +A K H++VG +S +S +++ F FG
Sbjct: 62 AAALAAMNGRKILGKDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFG 121
Query: 123 NIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
I D + ++D T F+ + DA A++ +NG+ +GG Q+R ++ +PS
Sbjct: 122 KISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSA-- 179
Query: 177 QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
P S++ G S H +Y+ QSS P + ++ G S + +
Sbjct: 180 --PKSNNE----------GASSKHLSYEEVLNQSS-------PSNCTVYCGGIAS-GLSD 219
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
Q++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 220 QLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYW 275
>gi|66821693|ref|XP_644288.1| hypothetical protein DDB_G0274995 [Dictyostelium discoideum AX4]
gi|60472437|gb|EAL70390.1| hypothetical protein DDB_G0274995 [Dictyostelium discoideum AX4]
Length = 1104
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 20/175 (11%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
+D++ PS LWVGN+ D ++ DLK FG FG L+ V ++ AFV FK +A A
Sbjct: 906 EDEDHLPSRVLWVGNIGMDVSEDDLKYEFGSFGELESVRILHNKYCAFVNFKDTNEAINA 965
Query: 73 KDALQGSDFRGNPIKIEFARPAKP--------------------SKHLWVGGISQTVSKE 112
K + I + F P S+ +++G +S + ++
Sbjct: 966 KKGMHNQVLGSQYIVVNFRHPKSDDFINGVPVVPITTPETLNSISRAIYIGNVSDNLPEK 1025
Query: 113 ELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
E+ + K+G IE + L+ AFV + + +A AL+ +NG+++G +RV++
Sbjct: 1026 EIRKECEKYGEIESIRILRKKACAFVNFMNIPNATAALQTLNGKKLGDTIVRVNY 1080
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 213 GRNRDGPPSKILWVGYPPSVQMD--EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDE 270
G + D PS++LWVG ++ MD E L FGE+E ++ ++ +FV F+ +E
Sbjct: 905 GEDEDHLPSRVLWVG---NIGMDVSEDDLKYEFGSFGELESVRILHNKYCAFVNFKDTNE 961
Query: 271 ARRAKEGLQGRLFNDPRITIMF 292
A AK+G+ ++ I + F
Sbjct: 962 AINAKKGMHNQVLGSQYIVVNF 983
>gi|149018628|gb|EDL77269.1| rCG25263 [Rattus norvegicus]
Length = 564
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 4 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 61
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 62 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 120
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 121 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 169
>gi|355746671|gb|EHH51285.1| hypothetical protein EGM_10631, partial [Macaca fascicularis]
Length = 597
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 38 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 95
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 96 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 154
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 155 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 203
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 23/274 (8%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL ++ L LFGK G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D T AFV + + +A A++ +NG+ IG +R ++ R P RE +S
Sbjct: 128 RDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE---SSKS 184
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
G +G G + K N+ P + ++ G +PP+V DE ++H
Sbjct: 185 GGQGGGMGGMGGGGGAGNGIKNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDE-LMHKH 243
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + ++F++F S + A RA E
Sbjct: 244 FMQFGPIQDVRVFKDKGFAFIKFVSKEAAARAIE 277
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 52/196 (26%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + +A+ A A
Sbjct: 96 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 155
Query: 76 LQGSDFRGNPIKIEFAR-----PAKPSKH------------------------------- 99
+ G I+ ++ P + SK
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKNQRHTFEEVY 215
Query: 100 ---------LWVGGIS-QTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEA 149
++ GG +S E + + F++FG I+D + KD AF+++ E AA A
Sbjct: 216 NQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVSKEAAARA 275
Query: 150 LKNINGRQIGGEQLRV 165
+++ + ++ G ++
Sbjct: 276 IEHTHNSEVHGNHVKC 291
>gi|37589116|gb|AAH52180.1| RNA binding motif protein 15B [Mus musculus]
Length = 564
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 4 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 61
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 62 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 120
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 121 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 169
>gi|354476449|ref|XP_003500437.1| PREDICTED: putative RNA-binding protein 15B-like [Cricetulus
griseus]
gi|344252785|gb|EGW08889.1| Putative RNA-binding protein 15B [Cricetulus griseus]
Length = 564
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 4 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 61
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 62 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 120
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 121 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 169
>gi|397496175|ref|XP_003818918.1| PREDICTED: putative RNA-binding protein 15B [Pan paniscus]
Length = 552
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 170 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 227
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 228 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 286
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 287 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 335
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 42/284 (14%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDA 69
D E P + L+VGNLS D T+A + ELFG+ G V T + FV F A
Sbjct: 2 DDEQPKT--LYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHA 59
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFG 122
A A+ G G +K+ +A K H++VG +S ++ ++++ F FG
Sbjct: 60 TATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFG 119
Query: 123 NIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P+
Sbjct: 120 KISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPA--- 176
Query: 177 QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
P + + + ++ QSS P + ++ G + + E
Sbjct: 177 --PKTTNETT----------NTKQLSFDEVVNQSS-------PSNCTVYCG-GVTTGLTE 216
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
Q++ FG I I+ +P + YSFV F S + A A + G
Sbjct: 217 QIMRQTFSPFGHIMEIRVFPDKGYSFVRFNSHEAAAHAIVSVNG 260
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS + T D+K FG FG + + T S+ + FV F D
Sbjct: 89 KDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWD 148
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPA----------------------KPSKH-LWVG 103
A+ A + G G I+ +A +PA PS ++ G
Sbjct: 149 AENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCG 208
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
G++ ++++ + + F FG+I + + D +FV ++ E AA A+ ++NG I G +
Sbjct: 209 GVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFVRFNSHEAAAHAIVSVNGTTIEGYVV 268
Query: 164 RV 165
+
Sbjct: 269 KC 270
>gi|57997108|emb|CAD38547.2| hypothetical protein [Homo sapiens]
gi|190689771|gb|ACE86660.1| RNA binding motif protein 15B protein [synthetic construct]
gi|190691137|gb|ACE87343.1| RNA binding motif protein 15B protein [synthetic construct]
Length = 563
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 4 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 61
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 62 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 120
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 121 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 169
>gi|141795846|gb|AAI39837.1| RBM15B protein [Homo sapiens]
Length = 563
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 4 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 61
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 62 MAHRAKVAMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 120
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 121 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 169
>gi|330864798|ref|NP_001193510.1| putative RNA-binding protein 15B [Bos taurus]
gi|296474899|tpg|DAA17014.1| TPA: RNA binding motif protein 15B [Bos taurus]
Length = 894
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 335 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 392
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK + G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 393 MAHRAKVGMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 451
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 452 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 500
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 22/273 (8%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL + ++ L LFGK G + + +AF+ + + A A A+
Sbjct: 9 LYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTALTAMNKR 68
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F IK+ +A P K H++VG +S + E L E F FG I + + ++
Sbjct: 69 VFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVR 128
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHDA 184
D +T AFV + + +A A++++NG+ IG +R ++ R P RE S
Sbjct: 129 DPHTMKSKGYAFVSFVKKAEAENAIQSMNGQWIGSRNIRTNWSTRKLPPPRES-SKSGGQ 187
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNAM 243
G G G + N + H V N+ P + ++ G +PP+V DE ++H
Sbjct: 188 GGGMGGMGGGGGAGNGIKNNQRHTFEEV-YNQSSPTNTTVYCGGFPPNVISDE-LMHKHF 245
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + ++F++F + + A RA E
Sbjct: 246 MQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIE 278
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 53/197 (26%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + +A+ A +
Sbjct: 96 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQS 155
Query: 76 LQGS-----DFRGNPIKIEFARPAKPSKH------------------------------- 99
+ G + R N + P + SK
Sbjct: 156 MNGQWIGSRNIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEV 215
Query: 100 ----------LWVGGIS-QTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAE 148
++ GG +S E + + F++FG I+D + KD AF+++ E AA
Sbjct: 216 YNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVTKEAAAR 275
Query: 149 ALKNINGRQIGGEQLRV 165
A+++ + ++ G ++
Sbjct: 276 AIEHTHNSEVHGNHVKC 292
>gi|357153263|ref|XP_003576393.1| PREDICTED: uncharacterized protein LOC100824421 [Brachypodium
distachyon]
Length = 1003
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 45/200 (22%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
APPS +LWVG+L + T +DL ELF + G ++ +T RSFAFV F R +A AA L
Sbjct: 66 APPSRHLWVGSLGSGVTVSDLSELFLRCGEIEGITRDPGRSFAFVSFMREHEAVAAVREL 125
Query: 77 QGSDFRGNPIKIEFA--------------------------------------------R 92
QG+ RG PI+IEF+ +
Sbjct: 126 QGTRLRGAPIRIEFSKGDKSSGSSMDDRYTQYADERHFVERGRKQQLSPEQSIDKSKRNK 185
Query: 93 PAKPSKHLWVG-GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALK 151
+PS+ LW+G V + L E F FG I AFV+Y+ + A +A +
Sbjct: 186 STEPSEVLWIGFPAGLKVDETALWEAFSSFGEIVKITSFPGRTYAFVKYTSIAAACKAKE 245
Query: 152 NINGRQIGGEQLRVDFLRSQ 171
+ GR ++ + F R++
Sbjct: 246 ALQGRLFNNPRVSICFSRNE 265
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVG---NLSADTTDADLKELFGKFGALDKVTTYSSRSFAF 60
P +++ +K PS LW+G L D T L E F FG + K+T++ R++AF
Sbjct: 174 PEQSIDKSKRNKSTEPSEVLWIGFPAGLKVDETA--LWEAFSSFGEIVKITSFPGRTYAF 231
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFAR 92
V + + A AK+ALQG F + I F+R
Sbjct: 232 VKYTSIAAACKAKEALQGRLFNNPRVSICFSR 263
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + ++F + G V T + + FV F A A+ A+ G
Sbjct: 10 LYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAMNG 69
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 70 RKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARVVK 129
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++++ G+ +GG Q+R ++ +P + +H+
Sbjct: 130 DMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPK---TTHEN- 185
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
+ H ++ QSS P + ++ G S + EQ++
Sbjct: 186 -----------NSKHLSFDEVVNQSS-------PSNCTVYCG-GVSTGLTEQLMRQTFSP 226
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I ++ +P + YSFV F S + A A + G
Sbjct: 227 FGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNG 261
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K FG FG + + T S+ + FV F DA+ A
Sbjct: 97 HVFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQH 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P SKHL + GG+S ++
Sbjct: 157 MGGQWLGGRQIRTNWATRKPPAPKTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLT 216
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++ + +
Sbjct: 217 EQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKE 276
Query: 171 QP 172
P
Sbjct: 277 TP 278
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +S T+ +++ F FG + +V + + ++FV F E A A
Sbjct: 197 NQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAI 256
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ GS G+ +K + +
Sbjct: 257 VSVNGSSIEGHIVKCYWGK 275
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 40/294 (13%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKA 71
E S L+VGNLS D T+ + +LF + G + +T ++S + FV F +DA +
Sbjct: 5 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAAS 64
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNI 124
A+ + G +K+ +A K H++VG +S ++ E++ F FG+I
Sbjct: 65 ARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHI 124
Query: 125 EDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
D + LKD T FV + DA A+ + G+ + G Q+R ++ +P
Sbjct: 125 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPA---- 180
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
P S F DN S H + + P + ++ G S + E +
Sbjct: 181 PKS--------------FQDNGS----KHLKFDDIVTQSSPHNCTVYCGGIQS-GLTEHL 221
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ FG+I I+ +P + YSFV F S D A A + G + + +
Sbjct: 222 MQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFW 275
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS D T D++ F FG L + T S+ + FV F D
Sbjct: 92 KDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLD 151
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVG 103
A+ A + G +G I+ +A +P P SKHL + G
Sbjct: 152 AENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCG 211
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
GI +++ +++ F FG I + + D +FV +S + AA A+ ++NG I G +
Sbjct: 212 GIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLV 271
Query: 164 RVDFLRSQPSRRE 176
+ + + P ++
Sbjct: 272 KCFWGKESPDMQK 284
>gi|75773735|gb|AAI04621.1| RBM15B protein [Bos taurus]
Length = 560
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 1 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 58
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK + G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 59 MAHRAKVGMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 117
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 118 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 166
>gi|426249916|ref|XP_004018692.1| PREDICTED: putative RNA-binding protein 15B, partial [Ovis aries]
Length = 612
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + NL++GNL ++ +L+ F K+G +++V ++AF+ F+ ++
Sbjct: 54 DDQRA--TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLD 111
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK + G NPIKI + + A P+ LWVGG+ S L F +FG+I
Sbjct: 112 MAHRAKVGMSGRVIGRNPIKIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI 170
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSR 174
+K + A+++Y L+ A A + G +GG +LRVDF +++ +R
Sbjct: 171 DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETR 219
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 40/294 (13%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKA 71
E S L+VGNLS D T+ + +LF + G + +T ++S + FV F +DA +
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAAS 62
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNI 124
A+ + G +K+ +A K H++VG +S ++ E++ F FG+I
Sbjct: 63 ARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHI 122
Query: 125 EDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
D + LKD T FV + DA A+ + G+ + G Q+R ++ +P
Sbjct: 123 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPA---- 178
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
P S F DN S H + + P + ++ G S + E +
Sbjct: 179 PKS--------------FQDNGS----KHLKFDDIVTQSSPHNCTVYCGGIQS-GLTEHL 219
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ FG+I I+ +P + YSFV F S D A A + G + + +
Sbjct: 220 MQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFW 273
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS D T D++ F FG L + T S+ + FV F D
Sbjct: 90 KDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLD 149
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVG 103
A+ A + G +G I+ +A +P P SKHL + G
Sbjct: 150 AENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCG 209
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
GI +++ +++ F FG I + + D +FV +S + AA A+ ++NG I G +
Sbjct: 210 GIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLV 269
Query: 164 RVDFLRSQPSRRE 176
+ + + P ++
Sbjct: 270 KCFWGKESPDMQK 282
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 44/286 (15%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDA 69
++ P +S +VGNLS D T+ + +LF + G + +T ++S + FV F DA
Sbjct: 77 EETRPGASPRYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDA 136
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFG 122
AA A+ G G +K+ +A K H++VG +S ++ E+++ F FG
Sbjct: 137 AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFG 196
Query: 123 NIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--R 174
I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++ +P +
Sbjct: 197 KISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK 256
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQM 234
Q N+ R ++ N+ P + ++ G S +
Sbjct: 257 STQENNTKQLRFEDVV------------------------NQSSPKNCTVYCGGIAS-GL 291
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 292 TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 337
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 173 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 232
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 233 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 292
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 293 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 352
Query: 171 QP 172
P
Sbjct: 353 SP 354
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 273 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 332
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 333 VSVNGTTIEGHVVKCYWGK 351
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 224 SPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 270
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 224 SPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 270
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 224 SPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 270
>gi|443689765|gb|ELT92082.1| hypothetical protein CAPTEDRAFT_136516 [Capitella teleta]
Length = 554
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFV 61
P N + + + L+VGNL + TDADL+ +F ++G ++ V ++AF+
Sbjct: 99 PHHLNHIEPEDDDKATRTLFVGNLDIEITDADLRGVFERYGTVEDVDIKRPQQGNAYAFI 158
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKF 121
F ++ A +K + G KI + +P PS LWVGG+ Q +S E LE F +F
Sbjct: 159 KFYNLDMAHRSKVQMSGEYIGKFQCKIGYGKPT-PSPCLWVGGLGQWLSAEVLEREFDRF 217
Query: 122 GNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
G I ++ + A+V Y ++ A ALK++ G +GG +LRVDF
Sbjct: 218 GVIHRIEWPHGKSFAYVLYDNIDAATAALKDMRGFPLGGSDHRLRVDF 265
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 224 SPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 270
>gi|384485171|gb|EIE77351.1| hypothetical protein RO3G_02055 [Rhizopus delemar RA 99-880]
Length = 452
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ- 77
PS LW+GN+S +DL ++F +G ++ S + AF+ F+ V+ A AAK L+
Sbjct: 205 PSRALWLGNISPSIKVSDLFQMFSSYGHIESARILSDKDCAFINFESVKSALAAKKDLET 264
Query: 78 --GSDFRGNPIKIEFARP----------------AKPSKHLWVGGISQTVSKEELEEGFL 119
GS G+ +K+ F + P++ LWVG I S L+ F
Sbjct: 265 RLGSKVGGSVVKVGFGKADVNLAVALTNEASPNVQGPTRALWVGNIPTNTSSHVLQPIFE 324
Query: 120 KFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQI---GGEQLRVDFLR 169
FG +E + L N AF+ + R EDA A K + ++I GG +RV F R
Sbjct: 325 SFGPVETIRILSHKNCAFINFHRQEDAVRARKMLQNKEILGPGGGTVRVGFAR 377
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 35/189 (18%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+ LW+G IS ++ +L + F +G+IE + L D + AF+ + ++ A A K++
Sbjct: 205 PSRALWLGNISPSIKVSDLFQMFSSYGHIESARILSDKDCAFINFESVKSALAAKKDLET 264
Query: 156 R---QIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSV 212
R ++GG ++V F G +D + A ++ S
Sbjct: 265 RLGSKVGGSVVKVGF---------------------------GKADVNLAVALTNEASP- 296
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
N GP ++ LWVG P+ +L FG +E I+ +N +F+ F ++A
Sbjct: 297 --NVQGP-TRALWVGNIPT-NTSSHVLQPIFESFGPVETIRILSHKNCAFINFHRQEDAV 352
Query: 273 RAKEGLQGR 281
RA++ LQ +
Sbjct: 353 RARKMLQNK 361
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 224 SPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 270
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 224 SPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 270
>gi|242013147|ref|XP_002427276.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511617|gb|EEB14538.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 800
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + ++ +L+ +F ++G ++ + + +FAFV F+ ++ A +K
Sbjct: 323 TRTLFAGNLEINISEEELRRIFERYGIVEDIDIKRPPPGTGNAFAFVRFQNLDMAHRSKV 382
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ Q S ++LE F +FG I+ ++K N
Sbjct: 383 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGQWTSIQQLEREFDRFGAIKKIDYIKGDN 441
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+A+++Y ++ A A+K + G +GG +LRVDF
Sbjct: 442 SAYIQYDSIDAAQAAVKEMRGFPLGGMEHRLRVDF 476
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+A P++ +WVG L T+ L+ F +FGA+ K+ + A++ + ++ A+AA
Sbjct: 400 KATPTTRIWVGGLGQWTSIQQLEREFDRFGAIKKIDYIKGDNSAYIQYDSIDAAQAAVKE 459
Query: 76 LQGSDFRG--NPIKIEFA 91
++G G + ++++FA
Sbjct: 460 MRGFPLGGMEHRLRVDFA 477
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK----DGNT-AFVEYSRLEDAAEALK 151
++ L+ G + +S+EEL F ++G +ED + GN AFV + L+ A +
Sbjct: 323 TRTLFAGNLEINISEEELRRIFERYGIVEDIDIKRPPPGTGNAFAFVRFQNLDMAHRSKV 382
Query: 152 NINGRQIGGEQLRVDFLRSQPSRR 175
++G+ IG Q ++ + ++ P+ R
Sbjct: 383 ELSGQYIGKFQCKIGYGKATPTTR 406
>gi|291244499|ref|XP_002742134.1| PREDICTED: OTT-MAL-like [Saccoglossus kowalevskii]
Length = 810
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L+VGNL A +++L+ +F +FG ++ V ++AFV F ++
Sbjct: 250 DDQRA--TRTLFVGNLEAAVAESELRRVFDRFGIVEDVDVKRPMRGQGNAYAFVKFLNLD 307
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G N KI + +P P+ LWVGG+ S LE F +FG I
Sbjct: 308 MAHKAKVAMSGQYLGRNICKIGYGKPV-PTTRLWVGGLGPWTSLAVLEREFDRFGAIRKI 366
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
++K N A++ Y L+ + A + G +GG +LRVDF
Sbjct: 367 DYIKGDNHAYISYDSLDASQAACSQMRGFPLGGPDRRLRVDF 408
>gi|281208502|gb|EFA82678.1| hypothetical protein PPL_04372 [Polysphondylium pallidum PN500]
Length = 918
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
PS LWVGN+ D ++ +LK FG +G L+ V R AFV FK +A AK +
Sbjct: 586 PSRILWVGNIGMDVSEEELKSEFGVYGELESVRILHDRFCAFVNFKDAINAANAKRNMHN 645
Query: 79 SDFRGNPIKIEFARPAKP----------------------SKHLWVGGISQTVSKEELEE 116
I + F P S+ +++G +S + ++E+ +
Sbjct: 646 QVLGSQFIVVNFRHPKSDEMFPNGTTGTTLITTPETLNSLSRAIYIGNVSDNLPEKEIRK 705
Query: 117 GFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
K+G IE + L+ AFV + + +A AL+ +NG+++G +RV++ + QP
Sbjct: 706 ECEKYGEIESVRILRKKACAFVNFMNIPNATVALQALNGKKLGDTIVRVNYGKPQP 761
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNIN 154
+PS+ LWVG I VS+EEL+ F +G +E + L D AFV + +AA A +N++
Sbjct: 585 QPSRILWVGNIGMDVSEEELKSEFGVYGELESVRILHDRFCAFVNFKDAINAANAKRNMH 644
Query: 155 GRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR 214
+ +G + + V+F P E +PN + P++
Sbjct: 645 NQVLGSQFIVVNF--RHPKSDEMFPNGTTG-----------------TTLITTPETLNSL 685
Query: 215 NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
S+ +++G S + E+ + +GEIE ++ + +FV F ++ A A
Sbjct: 686 ------SRAIYIGN-VSDNLPEKEIRKECEKYGEIESVRILRKKACAFVNFMNIPNATVA 738
Query: 275 KEGLQGRLFNDPRITIMF 292
+ L G+ D + + +
Sbjct: 739 LQALNGKKLGDTIVRVNY 756
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GN+S + + ++++ K+G ++ V ++ AFV F + +A A AL G
Sbjct: 689 IYIGNVSDNLPEKEIRKECEKYGEIESVRILRKKACAFVNFMNIPNATVALQALNGKKLG 748
Query: 83 GNPIKIEFARPAKPSKHLWVGGISQTVSKEEL 114
+++ + +P P G +T S++EL
Sbjct: 749 DTIVRVNYGKPQPPF------GSERTSSQQEL 774
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 215 NRDGPPSKILWVGYPPSVQMD--EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
N D PS+ILWVG ++ MD E+ L + ++GE+E ++ R +FV F+ A
Sbjct: 581 NSDEQPSRILWVG---NIGMDVSEEELKSEFGVYGELESVRILHDRFCAFVNFKDAINAA 637
Query: 273 RAKEGLQGRLFNDPRITIMF 292
AK + ++ I + F
Sbjct: 638 NAKRNMHNQVLGSQFIVVNF 657
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL + T+ + LF + G + S + FV F DA +A A+
Sbjct: 15 LYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSDPYCFVEFVNHSDASSAITAMNAR 74
Query: 80 DFRGNPIKIEFAR-------PAKPSK----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
G +++ +A P +P H++VG +S + +L E F FG I D +
Sbjct: 75 MCLGRELRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIETSDLREAFSPFGEISDCR 134
Query: 129 FLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
+KD T FV ++ +DA A+ ++G +G +R ++ +P+ +E
Sbjct: 135 VVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWASRKPNHKET----- 189
Query: 183 DARDGPIIGRGTGFSDNHSA--YKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
G IG +H A Y QSS P + ++ G + E L
Sbjct: 190 ----GSYIG------GHHRALNYDEVFAQSS-------PSNCTVYCGGLNQMASSEDFLR 232
Query: 241 NAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
A FGEI I+ + + Y+F++F S + A RA
Sbjct: 233 QAFDEFGEIVDIRLFKDKGYAFIKFNSKESACRA 266
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS +DL+E F FG + TT S+ + FV F +DA+ A
Sbjct: 105 HIFVGDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHT 164
Query: 76 LQGSDFRGNPIKIE---------------------------FARPAKPSKHLWVGGISQT 108
+ GS I+ FA+ + + ++ GG++Q
Sbjct: 165 MDGSWLGSRAIRTNWASRKPNHKETGSYIGGHHRALNYDEVFAQSSPSNCTVYCGGLNQM 224
Query: 109 VSKEE-LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
S E+ L + F +FG I D + KD AF++++ E A A+ + IGG+ ++ +
Sbjct: 225 ASSEDFLRQAFDEFGEIVDIRLFKDKGYAFIKFNSKESACRAIVARHNSDIGGQAVKCSW 284
Query: 168 LRSQPSRREQWP 179
+ Q + Q+P
Sbjct: 285 GKEQEPAQPQFP 296
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 12 YDD---KEAPPSSNLWVGNLSADTTDAD-LKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
YD+ + +P + ++ G L+ + D L++ F +FG + + + + +AF+ F E
Sbjct: 202 YDEVFAQSSPSNCTVYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKDKGYAFIKFNSKE 261
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSK 98
A A A SD G +K + + +P++
Sbjct: 262 SACRAIVARHNSDIGGQAVKCSWGKEQEPAQ 292
>gi|281209169|gb|EFA83344.1| hypothetical protein PPL_04137 [Polysphondylium pallidum PN500]
Length = 664
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ PS +W GN D T+ +++++FG FG + V ++ ++F+ + + + A+ L
Sbjct: 140 SQPSRVIWAGNTHPDATEEEIRQMFGTFGYIKYVKLVPAKRYSFITYAELNSSIQAQYEL 199
Query: 77 QGSDFRGNPIKIEFARPAK-----------PSKHLWVGGISQTVSKEELEEGFLKFGNIE 125
G+ RG P+K+ F + P K+LW+G ++ +V+++ L E F G +E
Sbjct: 200 NGAMLRGLPLKLGFGKAEAKEATGFDSQNPPCKNLWIGNVAMSVTEDSLRELFETVGKVE 259
Query: 126 DFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+ L AFV + +E A A + GR G L ++F R
Sbjct: 260 YVRVLTGRQCAFVSFQDVETAILAKSAVQGRNFHGLNLAINFRR 303
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
D + PP NLW+GN++ T+ L+ELF G ++ V + R AFV F+ VE A AK
Sbjct: 225 DSQNPPCKNLWIGNVAMSVTEDSLRELFETVGKVEYVRVLTGRQCAFVSFQDVETAILAK 284
Query: 74 DALQGSDFRGNPIKIEFARPA 94
A+QG +F G + I F R +
Sbjct: 285 SAVQGRNFHGLNLAINFRRES 305
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 37/199 (18%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
++PS+ +W G ++EE+ + F FG I+ K + +F+ Y+ L + +A +
Sbjct: 140 SQPSRVIWAGNTHPDATEEEIRQMFGTFGYIKYVKLVPAKRYSFITYAELNSSIQAQYEL 199
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
NG + G L++ F +++ TGF
Sbjct: 200 NGAMLRGLPLKLGFGKAEAKE------------------ATGF----------------- 224
Query: 214 RNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARR 273
+ PP K LW+G ++ + E L G++E ++ R +FV F+ V+ A
Sbjct: 225 -DSQNPPCKNLWIG-NVAMSVTEDSLRELFETVGKVEYVRVLTGRQCAFVSFQDVETAIL 282
Query: 274 AKEGLQGRLFNDPRITIMF 292
AK +QGR F+ + I F
Sbjct: 283 AKSAVQGRNFHGLNLAINF 301
>gi|14041648|emb|CAC38829.1| OTT-MAL [Homo sapiens]
Length = 1883
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|14041646|emb|CAC38828.1| OTT-MAL [Homo sapiens]
Length = 1905
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 50/276 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQ 77
L+VGNLS D T+A + +LF + G T + + FV F A AA A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFSEHRHAAAALAAMN 67
Query: 78 GSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
G G +K+ +A K H++VG +S ++ E+++ F FG I D + +
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVV 127
Query: 131 KDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDA 184
KD T FV + DA A++ + G+ +GG Q+R ++ +P + ++ ++
Sbjct: 128 KDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK---STFES 184
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
R GP+ R P +V P EQ++
Sbjct: 185 RSGPLSPR--------------VPDEAVQSVLPAP----------------EQLMRQTFS 214
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F S + A A + G
Sbjct: 215 PFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNG 250
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFA--RPAKPSKHL--WVGGISQTVSKEELE-----------EGFLK 120
+ G G I+ +A +P P G +S V E ++ + F
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTFESRSGPLSPRVPDEAVQSVLPAPEQLMRQTFSP 215
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
FG I + + D +FV +S E AA A+ ++NG I G ++
Sbjct: 216 FGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKC 260
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 140 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 199
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 200 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 259
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSHD 183
D T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 260 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQ 319
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R ++ N+ P + ++ G S + +Q++
Sbjct: 320 LRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTF 354
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 355 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 391
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 227 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 286
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 287 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 346
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 347 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 406
Query: 171 QP 172
P
Sbjct: 407 SP 408
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 327 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 386
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 387 VSVNGTTIEGHVVKCYWGK 405
>gi|432857215|ref|XP_004068586.1| PREDICTED: putative RNA-binding protein 15-like [Oryzias latipes]
Length = 824
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V S ++ F+ F+ ++
Sbjct: 279 DDQRA--NRTLFLGNLDVSVTESDLRRAFDRFGVITEVDIKRPVKGQSNTYGFIKFENLD 336
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G +P+KI + +P P+ LWVGG+ V L + F +FG I
Sbjct: 337 MAHRAKVAMSGKILGHSPVKIGYGKPT-PTTRLWVGGLGPWVPLTALAKEFDRFGTIRTI 395
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 396 DYRKGEAWAYIQYESLDAAQAACSHMRGFPLGGPDRRLRVDF 437
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
++VGNL T+ + LFG+ GA+ K ++ +AFV F A A A+
Sbjct: 76 VYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMNKR 135
Query: 80 DFRGNPIKIEFA-RPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P +K H++VG +S V + L++ F FG + D K ++
Sbjct: 136 VLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIR 195
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV Y + E+A A++ +NG+ +G +R ++ +P+
Sbjct: 196 DATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT------------ 243
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
GTG D Y RS N+ GP + ++VG S DE L A
Sbjct: 244 -------GTGAGDGQ--YGRSELNYDDVYNQTGPDNTSVYVGNVNSSANDED-LRAAFDK 293
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGR 281
FG I ++ + S+ Y+FV F D A A + G+
Sbjct: 294 FGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQ 329
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 34/189 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + + LK+ F FG + TT S+ + FV + + E+A+ A +
Sbjct: 163 HVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQ 222
Query: 76 LQGSDFRGNPIKIEFARPAKPS---------------------------KHLWVGGISQT 108
+ G I+ +A KP+ ++VG ++ +
Sbjct: 223 MNGQWLGRRTIRTNWA-TRKPTGTGAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSS 281
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ E+L F KFG I + + K AFV + + + A A+ +NG+++ G+ ++ +
Sbjct: 282 ANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWG 341
Query: 169 RSQPSRREQ 177
R+ +Q
Sbjct: 342 RTPEGHSQQ 350
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 12 YDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVED 68
YDD + P +++++VGN+++ D DL+ F KFG + +V + S+ +AFV F + +
Sbjct: 259 YDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDS 318
Query: 69 AKAAKDALQGSDFRGNPIKIEFAR 92
A A + G + G IK + R
Sbjct: 319 ACNAICKMNGQELCGQNIKCSWGR 342
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 71 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 130
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSHD 183
D T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 131 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQ 190
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R ++ N+ P + ++ G S + +Q++
Sbjct: 191 LRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTF 225
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 262
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 98 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 157
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 217
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 218 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Query: 171 QP 172
P
Sbjct: 278 SP 279
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 198 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 257
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 258 VSVNGTTIEGHVVKCYWGK 276
>gi|410914728|ref|XP_003970839.1| PREDICTED: uncharacterized protein LOC101079913 [Takifugu rubripes]
Length = 577
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 11 AYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAK 70
A D + + + L+VGNL D T +L +LF +G ++ + R +AFV K A
Sbjct: 32 ALDSEMSGENVKLFVGNLPIDATQDELNKLFAPYGEINTCSLL--RQYAFVTLKGEGAAD 89
Query: 71 AAKDALQGSDFRGNPIKIEFARPAKP-SKHLWVGGISQTVSKEELEEGFLKFGNIEDF-- 127
A L G ++RG P+ +E +R P S ++VG IS T S ++L F FG + D
Sbjct: 90 RAIRHLDGKEYRGRPLVVEESRARPPNSTKVFVGNISATCSADDLHGLFASFGRVLDCDK 149
Query: 128 ---KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
+ + AFV R E+A A+ +NG G QL V+ ++QP
Sbjct: 150 VKARLCSNVGYAFVHMERKEEAMAAIDALNGTMFKGRQLAVELSKAQP 197
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGAL---DKVTT--YSSRSFAFVYFKRVEDAKAA 72
P S+ ++VGN+SA + DL LF FG + DKV S+ +AFV+ +R E+A AA
Sbjct: 115 PNSTKVFVGNISATCSADDLHGLFASFGRVLDCDKVKARLCSNVGYAFVHMERKEEAMAA 174
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFL 119
DAL G+ F+G + +E ++ A+P + V G + T E+ E G L
Sbjct: 175 IDALNGTMFKGRQLAVELSK-AQPLVNQMVSGGNST-GAEDHEGGLL 219
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVED 68
DD+ P + L+VGNLS D T+ + +LF + G + +T ++S + FV F D
Sbjct: 2 DDETHPRT--LYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRD 59
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKF 121
A AA A+ G G +K+ +A K H++VG ++ ++ E++ F F
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAFAPF 119
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G I D + +KD T FV + DA A+ N++G+ +GG Q+R ++ +P
Sbjct: 120 GKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPA- 178
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
P S DN S R N+ P + ++ G S +
Sbjct: 179 ---PKSTQ--------------DNGSKQLRFDDVV----NQSSPQNCTVYCGGIQS-GLS 216
Query: 236 EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLF 283
E ++ FG+I ++ +P + YSF+ F S D A A + G +
Sbjct: 217 EHLMRQTFSPFGQIMEVRVFPEKGYSFIRFSSHDSAAHAIVSVNGTVI 264
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+L+ + T D++ F FG + +TT S+ + FV F DA+ A
Sbjct: 97 HVFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIIN 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P SK L + GGI +S
Sbjct: 157 MSGQWLGGRQIRTNWATRKPPAPKSTQDNGSKQLRFDDVVNQSSPQNCTVYCGGIQSGLS 216
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +F+ +S + AA A+ ++NG I G ++ + +
Sbjct: 217 EHLMRQTFSPFGQIMEVRVFPEKGYSFIRFSSHDSAAHAIVSVNGTVIEGHVVKCFWGKE 276
Query: 171 QP 172
P
Sbjct: 277 SP 278
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 44/293 (15%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 21 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 80
Query: 80 DFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
G +K+ +A K H++VG +S ++ E+++ F FG I D + +KD
Sbjct: 81 KIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKD 140
Query: 133 GNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARD 186
T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 141 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK---------- 190
Query: 187 GPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 191 --------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTFS 235
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 236 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 288
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|348507889|ref|XP_003441488.1| PREDICTED: putative RNA-binding protein 15-like [Oreochromis
niloticus]
Length = 851
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V S ++ F+ F+ ++
Sbjct: 291 DDQRA--NRTLFLGNLDVTVTESDLRRAFDRFGVITEVDIKRTVRGQSNTYGFIKFENLD 348
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G +PIKI + +P PS LWVGG+ V L + F +FG I
Sbjct: 349 MAHRAKVAMAGKILGHSPIKIGYGKPT-PSTRLWVGGLGPWVPLAALAKEFDRFGTIRTI 407
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQWP 179
+ K A+++Y L+ A ++ G +GG +LRVDF ++ +R +Q P
Sbjct: 408 DYRKGDAWAYIQYESLDAAQAGYTHMRGFPLGGPDRRLRVDFAEAE-TRYQQQP 460
>gi|449490120|ref|XP_004186141.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15
[Taeniopygia guttata]
Length = 654
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVE 67
DD+ A + L++GNL +++DL+ F +FG + +V + ++ F+ F+ ++
Sbjct: 63 DDQRA--NRTLFLGNLDITVSESDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLD 120
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 121 MAHRAKLAMSGKVLLRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 179
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K + A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 180 DYRKGDSWAYIQYESLDAAQAACTHMRGFPLGGPDRRLRVDF 221
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
++VGNL T+ + LFG+ GA+ K ++ +AFV F A A A+
Sbjct: 95 VYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMNKR 154
Query: 80 DFRGNPIKIEFA-RPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P +K H++VG +S V + L++ F FG + D K ++
Sbjct: 155 VLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIR 214
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV Y + E+A A++ +NG+ +G +R ++ +P+
Sbjct: 215 DATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT------------ 262
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
GTG D Y RS N+ GP + ++VG S DE L A
Sbjct: 263 -------GTGAGDGQ--YGRSELNYDDVYNQTGPDNTSVYVGNVNSNANDED-LRAAFDK 312
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGR 281
FG I ++ + S+ Y+FV F D A A + G+
Sbjct: 313 FGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQ 348
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 35/195 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + + LK+ F FG + TT S+ + FV + + E+A+ A +
Sbjct: 182 HVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQ 241
Query: 76 LQGSDFRGNPIKIEFARPAKPS---------------------------KHLWVGGISQT 108
+ G I+ +A KP+ ++VG ++
Sbjct: 242 MNGQWLGRRTIRTNWA-TRKPTGTGAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSN 300
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ E+L F KFG I + + K AFV + + + A A+ +NG+++ G+ ++ +
Sbjct: 301 ANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWG 360
Query: 169 RSQPSRREQWPNSHD 183
R+ P Q N+++
Sbjct: 361 RT-PEGHNQQANAYN 374
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 12 YDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVED 68
YDD + P +++++VGN++++ D DL+ F KFG + +V + S+ +AFV F + +
Sbjct: 278 YDDVYNQTGPDNTSVYVGNVNSNANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDS 337
Query: 69 AKAAKDALQGSDFRGNPIKIEFAR 92
A A + G + G IK + R
Sbjct: 338 ACNAICKMNGQELCGQNIKCSWGR 361
>gi|189238786|ref|XP_974651.2| PREDICTED: similar to AGAP005127-PA [Tribolium castaneum]
Length = 717
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +FG++G ++ + + +FAFV F ++ A AK
Sbjct: 282 TRTLFAGNLEINITEEELRRIFGRYGVVEDIDIKRPPPGTGNAFAFVRFHTLDMAHRAKV 341
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K N
Sbjct: 342 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYVKGDN 400
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LR DF P
Sbjct: 401 QAYILYDSIDAAQAAVKEMRGAPLGGPDRRLRTDFADVTP 440
>gi|353241455|emb|CCA73269.1| related to JSN1-RNA-binding protein (pumilio family)
[Piriformospora indica DSM 11827]
Length = 1295
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 44/216 (20%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ- 77
PS +LW+GNL T L +F +GA++ + + FV F + DA AKD +
Sbjct: 454 PSRSLWIGNLDTTATKETLLTVFSPYGAIESLRLLPEKECGFVNFLDINDAVRAKDDVLN 513
Query: 78 --GSDF---RGNPIKIEFAR----PAKPSKH----------------------------- 99
G + G P++I F + PA+PSK
Sbjct: 514 RLGGNIGLPNGQPVRIGFGKADSAPAQPSKANGPVNMNANVLASTAGAPAGMEVQSTPTR 573
Query: 100 -LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQI 158
LW+G I T + + F FG IE + L N FV + RL+DA A K +NGR +
Sbjct: 574 ALWIGSIPSTTTPATILSIFAPFGPIESARVLTHKNCGFVNFERLDDAVRARKALNGRDV 633
Query: 159 GGEQ---LRVDFLRSQPSRREQWPNSHDARDGPIIG 191
G +R+ + R P + + A D P +G
Sbjct: 634 LGSDVGAIRIGYARV-PVKSGSGDGTGTADDAPPVG 668
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
QG R K E + PS+ LW+G + T +KE L F +G IE + L +
Sbjct: 435 QGQQPRSLSPKGETPQIQTPSRSLWIGNLDTTATKETLLTVFSPYGAIESLRLLPEKECG 494
Query: 137 FVEYSRLEDAAEALKNINGRQIG------GEQLRVDFLRSQPSRREQWPNSHDARDGPII 190
FV + + DA A ++ R G G+ +R+ F + + P +GP+
Sbjct: 495 FVNFLDINDAVRAKDDVLNRLGGNIGLPNGQPVRIGF-----GKADSAPAQPSKANGPVN 549
Query: 191 GRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIE 250
+ A QS+ P++ LW+G PS +L + FG IE
Sbjct: 550 MNANVLASTAGAPAGMEVQST--------PTRALWIGSIPSTTTPATIL-SIFAPFGPIE 600
Query: 251 RIKSYPSRNYSFVEFRSVDEARRAKEGLQGR 281
+ +N FV F +D+A RA++ L GR
Sbjct: 601 SARVLTHKNCGFVNFERLDDAVRARKALNGR 631
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
+ ++ P+ LW+G++ + TT A + +F FG ++ + ++ FV F+R++DA A+
Sbjct: 566 EVQSTPTRALWIGSIPSTTTPATILSIFAPFGPIESARVLTHKNCGFVNFERLDDAVRAR 625
Query: 74 DALQGSDFRGN---PIKIEFAR 92
AL G D G+ I+I +AR
Sbjct: 626 KALNGRDVLGSDVGAIRIGYAR 647
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 71 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 130
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSHD 183
D T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 131 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQ 190
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R ++ N+ P + ++ G S + +Q++
Sbjct: 191 LRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTF 225
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 262
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 98 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 157
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 217
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 218 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Query: 171 QP 172
P
Sbjct: 278 SP 279
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 198 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 257
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 258 VSVNGTTIEGHVVKCYWGK 276
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 71 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 130
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSHD 183
D T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 131 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQ 190
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R ++ N+ P + ++ G S + +Q++
Sbjct: 191 LRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTF 225
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 262
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 98 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 157
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 217
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 218 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Query: 171 QP 172
P
Sbjct: 278 SP 279
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 198 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 257
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 258 VSVNGTTIEGHVVKCYWGK 276
>gi|348519072|ref|XP_003447055.1| PREDICTED: hypothetical protein LOC100709068 [Oreochromis
niloticus]
Length = 603
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
L+VGNL D T +L +LF +G ++ + R +AFV K A A L G ++R
Sbjct: 66 LFVGNLPIDATHEELNKLFAPYGEINTCSLL--RQYAFVTLKGEGAADRAIRHLDGKEYR 123
Query: 83 GNPIKIEFARPAKP-SKHLWVGGISQTVSKEELEEGFLKFGNIEDF-----KFLKDGNTA 136
G P+ +E +R P S ++VG +S T S ++L F FG + D + + A
Sbjct: 124 GRPLVVEESRARPPNSTKVFVGNLSATCSADDLHGLFSAFGRVLDCDKVKARLCSNVGYA 183
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
FV R E+A A++ +NG G QL V+ ++QP
Sbjct: 184 FVHMERKEEALAAIEALNGTMFKGRQLAVELSKAQP 219
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGAL---DKVTT--YSSRSFAFVYFKRVEDAKAA 72
P S+ ++VGNLSA + DL LF FG + DKV S+ +AFV+ +R E+A AA
Sbjct: 137 PNSTKVFVGNLSATCSADDLHGLFSAFGRVLDCDKVKARLCSNVGYAFVHMERKEEALAA 196
Query: 73 KDALQGSDFRGNPIKIEFAR 92
+AL G+ F+G + +E ++
Sbjct: 197 IEALNGTMFKGRQLAVELSK 216
>gi|270010131|gb|EFA06579.1| hypothetical protein TcasGA2_TC009491 [Tribolium castaneum]
Length = 702
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +FG++G ++ + + +FAFV F ++ A AK
Sbjct: 267 TRTLFAGNLEINITEEELRRIFGRYGVVEDIDIKRPPPGTGNAFAFVRFHTLDMAHRAKV 326
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K N
Sbjct: 327 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYVKGDN 385
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LR DF P
Sbjct: 386 QAYILYDSIDAAQAAVKEMRGAPLGGPDRRLRTDFADVTP 425
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 46/296 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
L+VGNLS D T+A + +LF + G + V T + + FV F A AA A+
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 68
Query: 77 QGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
G G +K+ +A K H++VG +S ++ E+++ F FG I D +
Sbjct: 69 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 128
Query: 130 LKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHD 183
+KD T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK------- 181
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHN 241
S Y+ + Q S ++ P + ++ G S + EQ++
Sbjct: 182 -----------------STYESNTKQLSYDEVVSQSSPNNCTVYCGGVTS-GLTEQLMRQ 223
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 224 TFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 279
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 98 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 157
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLT 217
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
++ + + F FG I + + D +FV +S E AA A+ ++NG I G ++ +
Sbjct: 218 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYW 274
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 92 CYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 151
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 152 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 211
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSHD 183
D T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 212 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQ 271
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R ++ N+ P + ++ G S + +Q++
Sbjct: 272 LRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTF 306
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 307 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 343
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 179 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 238
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 239 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 298
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 299 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 358
Query: 171 QP 172
P
Sbjct: 359 SP 360
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 279 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 338
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 339 VSVNGTTIEGHVVKCYWGK 357
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 46/296 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
L+VGNLS D T+A + +LF + G + V T + + FV F A AA A+
Sbjct: 17 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 76
Query: 77 QGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
G G +K+ +A K H++VG +S ++ E+++ F FG I D +
Sbjct: 77 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 136
Query: 130 LKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHD 183
+KD T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 137 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK------- 189
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHN 241
S Y+ + Q S ++ P + ++ G S + EQ++
Sbjct: 190 -----------------STYESNTKQLSYDEVVSQSSPNNCTVYCGGVTS-GLTEQLMRQ 231
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 232 TFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 287
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 106 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 165
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 166 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLT 225
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV +S E AA A+ ++NG I G ++
Sbjct: 226 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKC 280
>gi|47228760|emb|CAG07492.1| unnamed protein product [Tetraodon nigroviridis]
Length = 841
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ADL+ F +FG + +V T ++ F+ F+ ++
Sbjct: 292 DDQRA--NRTLFLGNLDITVTEADLRRAFDRFGVITEVDIKRPTRGQVSTYGFLKFENLD 349
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK ++ G NPIKI + + A PS LWVGG+ V L F +FG I
Sbjct: 350 MAHRAKLSMSGKVVGRNPIKIGYGK-ATPSTRLWVGGLGPWVPLAALAREFDRFGTIRTI 408
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 409 DYRKGHTWAYIQYESLDAAQAACTHMRGFPLGGPERRLRVDF 450
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
++VGNL T+ + LFG+ GA+ K ++ +AFV F A A A+
Sbjct: 76 VYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMNKR 135
Query: 80 DFRGNPIKIEFA-RPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P +K H++VG +S V + L++ F FG + D K ++
Sbjct: 136 VLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIR 195
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV Y + E+A A++ +NG+ +G +R ++ +P+
Sbjct: 196 DATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT------------ 243
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
GTG D Y R+ N+ GP + ++VG S DE L A
Sbjct: 244 -------GTGAGDGQ--YGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDED-LRAAFDK 293
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGR 281
FG I ++ + S+ Y+FV F D A A + G+
Sbjct: 294 FGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQ 329
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 88/195 (45%), Gaps = 35/195 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + + LK+ F FG + TT S+ + FV + + E+A+ A +
Sbjct: 163 HVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQ 222
Query: 76 LQGSDFRGNPIKIEFARPAKPS---------------------------KHLWVGGISQT 108
+ G I+ +A KP+ ++VG ++ +
Sbjct: 223 MNGQWLGRRTIRTNWA-TRKPTGTGAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSS 281
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ E+L F KFG I + + K AFV + + + A A+ +NG+++ G+ ++ +
Sbjct: 282 ANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWG 341
Query: 169 RSQPSRREQWPNSHD 183
R+ P Q N+++
Sbjct: 342 RT-PEGHNQQANAYN 355
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 12 YDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVED 68
YDD + P +++++VGN+++ D DL+ F KFG + +V + S+ +AFV F + +
Sbjct: 259 YDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDS 318
Query: 69 AKAAKDALQGSDFRGNPIKIEFAR 92
A A + G + G IK + R
Sbjct: 319 ACNAICKMNGQELCGQNIKCSWGR 342
>gi|195581400|ref|XP_002080522.1| GD10528 [Drosophila simulans]
gi|194192531|gb|EDX06107.1| GD10528 [Drosophila simulans]
Length = 768
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 294 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 353
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 354 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 412
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 413 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 447
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 124/278 (44%), Gaps = 45/278 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 79 SDFRGNPIKIEFARPAKPSK--------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
G +K+ +A K H++VG +S ++ E+++ F FG I D + +
Sbjct: 71 RKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVV 130
Query: 131 KDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSH 182
KD T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 131 KDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTK 190
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R ++ N+ P + ++ G S + +Q++
Sbjct: 191 QLRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQT 225
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 263
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 99 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 158
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 159 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 218
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 219 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 278
Query: 171 QP 172
P
Sbjct: 279 SP 280
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 199 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 258
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 259 VSVNGTTIEGHVVKCYWGK 277
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S ++ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVSQSSPNNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 224 SPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV +S E AA A+ ++NG I G ++
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKC 270
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 71 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 130
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSHD 183
D T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 131 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQ 190
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R ++ N+ P + ++ G S + +Q++
Sbjct: 191 LRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTF 225
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 262
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 31/189 (16%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS + T D+K F FG + + T S+ + FV F D
Sbjct: 91 KDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLD 150
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVG 103
A+ A + G G I+ +A +P P +K L + G
Sbjct: 151 AENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCG 210
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
GI+ ++ + + + F FG I + + + +FV +S E AA A+ ++NG I G +
Sbjct: 211 GIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVV 270
Query: 164 RVDFLRSQP 172
+ + + P
Sbjct: 271 KCYWGKESP 279
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 198 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 257
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 258 VSVNGTTIEGHVVKCYWGK 276
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 53/328 (16%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS----FAFVYFK 64
N+ +DD P L+VGNL T+A + +LFG+ G + + FV F
Sbjct: 4 NQYFDDDALP--RTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFV 61
Query: 65 RVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEG 117
A AA + G G +K+ +A K H++VG +S V +L+
Sbjct: 62 EHSHAAAALQTMNGRMILGKEVKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLKAA 121
Query: 118 FLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
F FG I D + +KD T FV + DA A++ +NG+ + G +R ++ +
Sbjct: 122 FAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATRK 181
Query: 172 PSRREQWPNSHDARDGPIIGRGTGFSD--NHSAYKRSHPQSSVGRNRDGPPSKILWVGYP 229
P Q P + + D N S+Y + +++G
Sbjct: 182 PPPPRQ----------PETTKQLSYDDVCNSSSYTNT----------------TVYIG-G 214
Query: 230 PSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRIT 289
+ + E + +G I+ ++ +P + Y+F+ F + + A A + G N +
Sbjct: 215 VTTGLTEGKMRETFSHYGHIQEVRIFPDKGYAFIRFMTHESAAHAIVSVNGSQINGHMVK 274
Query: 290 IMF---SSSEL--APGKDYPGSYSGTKG 312
+ SS L A YPG Y+ +G
Sbjct: 275 CSWGKESSDPLYQAQPNTYPGYYNYQQG 302
>gi|195383756|ref|XP_002050592.1| GJ20116 [Drosophila virilis]
gi|194145389|gb|EDW61785.1| GJ20116 [Drosophila virilis]
Length = 793
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 314 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 373
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 374 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 432
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 433 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 467
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + ++F + G V T + + FV F A A+ A+ G
Sbjct: 9 LYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASLAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ ++++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVK 128
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
+ Y+ + Q N+ P + ++ G S + EQ++
Sbjct: 180 ---------------TTYESNSKQLCFDDVVNQSSPSNCTVYCG-GVSTGLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG I I+ +P + YSFV F S + A A + G
Sbjct: 224 SPFGPIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 260
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K FG FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P SK L + GG+S ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++ + +
Sbjct: 216 EQLMRQTFSPFGPIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGKE 275
Query: 171 QP 172
P
Sbjct: 276 TP 277
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 11 AYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
+DD + +P + ++ G +S T+ +++ F FG + ++ + + ++FV F E
Sbjct: 190 CFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGYSFVRFNSHE 249
Query: 68 DAKAAKDALQGSDFRGNPIKIEFAR 92
A A ++ GS G+ +K + +
Sbjct: 250 SAAHAIVSVNGSSIEGHVVKCYWGK 274
>gi|194863642|ref|XP_001970541.1| GG23320 [Drosophila erecta]
gi|190662408|gb|EDV59600.1| GG23320 [Drosophila erecta]
Length = 774
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 294 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 353
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 354 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 412
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 413 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 447
>gi|195425606|ref|XP_002061087.1| GK10751 [Drosophila willistoni]
gi|194157172|gb|EDW72073.1| GK10751 [Drosophila willistoni]
Length = 798
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 316 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 375
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 376 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGGWTSVTQLEREFDRFGAIKKIEYQKGDP 434
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 435 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 469
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
++VGNL T+ + LFG+ GA+ K ++ +AFV F A A A+
Sbjct: 49 VYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMNKR 108
Query: 80 DFRGNPIKIEFA-RPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P +K H++VG +S V + L++ F FG + D K ++
Sbjct: 109 VLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIR 168
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV Y + E+A A++ +NG+ +G +R ++ +P+
Sbjct: 169 DATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT------------ 216
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
GTG D Y R+ N+ GP + ++VG S DE L A
Sbjct: 217 -------GTGAGDGQ--YGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDED-LRAAFDK 266
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGR 281
FG I ++ + S+ Y+FV F D A A + G+
Sbjct: 267 FGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQ 302
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 35/194 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
++VG+LS + + LK+ F FG + TT S+ + FV + + E+A+ A + +
Sbjct: 137 VFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQM 196
Query: 77 QGSDFRGNPIKIEFARPAKPS---------------------------KHLWVGGISQTV 109
G I+ +A KP+ ++VG ++ +
Sbjct: 197 NGQWLGRRTIRTNWA-TRKPTGTGAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSA 255
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+ E+L F KFG I + + K AFV + + + A A+ +NG+++ G+ ++ + R
Sbjct: 256 NDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGR 315
Query: 170 SQPSRREQWPNSHD 183
+ P Q N+++
Sbjct: 316 T-PEGHNQQANAYN 328
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 12 YDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVED 68
YDD + P +++++VGN+++ D DL+ F KFG + +V + S+ +AFV F + +
Sbjct: 232 YDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDS 291
Query: 69 AKAAKDALQGSDFRGNPIKIEFAR 92
A A + G + G IK + R
Sbjct: 292 ACNAICKMNGQELCGQNIKCSWGR 315
>gi|195474554|ref|XP_002089556.1| GE19164 [Drosophila yakuba]
gi|194175657|gb|EDW89268.1| GE19164 [Drosophila yakuba]
Length = 774
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 294 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 353
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 354 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 412
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 413 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 447
>gi|194757497|ref|XP_001961001.1| GF13651 [Drosophila ananassae]
gi|190622299|gb|EDV37823.1| GF13651 [Drosophila ananassae]
Length = 774
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 294 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 353
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +WVGG+ S +LE F +FG I+ ++ K
Sbjct: 354 ELSGQYIGKFQCKIGYGK-VTPATRIWVGGLGAWTSVTQLEREFDRFGVIKKIEYQKGEP 412
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 413 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 447
>gi|19921778|ref|NP_610339.1| spenito, isoform B [Drosophila melanogaster]
gi|24586450|ref|NP_724633.1| spenito, isoform A [Drosophila melanogaster]
gi|5052618|gb|AAD38639.1|AF145664_1 BcDNA.GH11110 [Drosophila melanogaster]
gi|7304123|gb|AAF59160.1| spenito, isoform B [Drosophila melanogaster]
gi|21627747|gb|AAM68878.1| spenito, isoform A [Drosophila melanogaster]
gi|220953662|gb|ACL89374.1| nito-PA [synthetic construct]
Length = 793
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 313 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 372
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 373 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 431
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 432 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 466
>gi|444724640|gb|ELW65239.1| Putative RNA-binding protein 15, partial [Tupaia chinensis]
Length = 1381
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + ++ F+ F+ ++
Sbjct: 751 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 808
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 809 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 867
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 868 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 920
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 41/284 (14%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDA 69
D E+ P + L+VGNLS D T+ + +LF + G + +T ++S + FV F DA
Sbjct: 2 DDESHPRT-LYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA 60
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFG 122
AA A+ G G +K+ +A K H++VG ++ +S E++ F FG
Sbjct: 61 AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFG 120
Query: 123 NIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++ +P
Sbjct: 121 KISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKP---- 176
Query: 177 QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
P +D + + F + +S PQ+ ++ G S ++ E
Sbjct: 177 --PAPKSLQDS--VSKQLRFEE---VVTQSSPQNCT-----------VYCGGIQS-ELSE 217
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
++ FG+I I+ +P + YSF+ F S D A A + G
Sbjct: 218 HLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNG 261
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+L+ D + D++ F FG + +TT S+ + FV F DA+ A
Sbjct: 97 HVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVH 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P SK L + GGI +S
Sbjct: 157 MAGQWLGGRQIRTNWATRKPPAPKSLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELS 216
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ + + F FG I + + + +F+ +S + AA A+ ++NG I G ++
Sbjct: 217 EHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKC 271
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 124/278 (44%), Gaps = 45/278 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 79 SDFRGNPIKIEFARPAKPSK--------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
G +K+ +A K H++VG +S ++ E+++ F FG I D + +
Sbjct: 71 RKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVV 130
Query: 131 KDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSH 182
KD T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 131 KDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTK 190
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R ++ N+ P + ++ G S + +Q++
Sbjct: 191 QLRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQT 225
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 263
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 99 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 158
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 159 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 218
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 219 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 278
Query: 171 QP 172
P
Sbjct: 279 SP 280
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 199 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 258
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 259 VSVNGTTIEGHVVKCYWGK 277
>gi|195121748|ref|XP_002005381.1| GI20446 [Drosophila mojavensis]
gi|193910449|gb|EDW09316.1| GI20446 [Drosophila mojavensis]
Length = 791
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 314 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 373
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 374 ELSGQYIGKFQCKIGYGK-VTPATRIWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 432
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 433 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 467
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S ++ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVSQSSPGNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FG+I I+ +P + YSF+ F S + A A + G + + L
Sbjct: 224 SPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 277
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
++ + + F FG I + + D +F+ +S E AA A+ ++NG I G ++ +
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYW 272
>gi|410899543|ref|XP_003963256.1| PREDICTED: putative RNA-binding protein 15-like [Takifugu rubripes]
Length = 845
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ADL+ F +FG + +V T ++ F+ F+ ++
Sbjct: 292 DDQRA--NRTLFLGNLDITVTEADLRRAFDRFGVITEVDIKRPTRGQVSTYGFLKFENLD 349
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK ++ G NPIKI + + A PS LWVGG+ V L F +FG I
Sbjct: 350 MAHRAKLSMSGKVVGRNPIKIGYGK-ATPSTRLWVGGLGPWVPLAALAREFDRFGTIRTI 408
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 409 DYRKGHTWAYIQYESLDAAQAACTHMRGFPLGGPERRLRVDF 450
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 24/274 (8%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL ++ L LFGK G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RVFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D T AFV + + +A A++ +NG+ IG +R ++ R P RE ++
Sbjct: 128 RDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE---STKA 184
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
G +G G + + H V N+ P + ++ G +PP+V D+ ++H
Sbjct: 185 GGQGGGMGGGGPGNGTGIKSNQRHTFEEV-YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 242
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + ++F++F + + A RA E
Sbjct: 243 FMQFGPIQDVRVFKEKGFAFIKFVTKEAAARAIE 276
>gi|17862204|gb|AAL39579.1| LD14125p [Drosophila melanogaster]
Length = 589
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 109 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 168
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 169 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 227
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 228 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 262
>gi|417413205|gb|JAA52945.1| Putative large rna-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 944
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 356 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 413
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 414 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGSWVPLAALAREFDRFGTIRTI 472
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 473 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 525
>gi|125823894|ref|XP_001335820.1| PREDICTED: putative RNA-binding protein 15 [Danio rerio]
Length = 853
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V T S ++ F+ F+ ++
Sbjct: 298 DDQRA--NRTLFLGNLDITVTENDLRRAFERFGTITEVDIKRPTRGQSSTYGFLKFENLD 355
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK ++ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 356 MAHRAKISMSGKVVGRNPIKIGYGK-ATPTTRLWVGGLGPWVPLTALAREFDRFGTIRTI 414
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 415 DYRKGDTWAYIQYESLDAAQAACTHMRGFPLGGPDRRLRVDFADTEHRYQQQF 467
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 60
Query: 80 DFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
G +K+ +A K H++VG +S ++ E+++ F FG I D + +KD
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKD 120
Query: 133 GNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARD 186
T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 121 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK---------- 170
Query: 187 GPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
S Y+ + Q S N+ P + ++ G S + EQ++
Sbjct: 171 --------------STYEANTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTFS 215
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F S + A A + G
Sbjct: 216 PFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 251
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 87 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 146
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 147 MGGQWLGGRQIRTNWATRKPPAPKSTYEANTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 206
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++ + +
Sbjct: 207 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHIVKCYWGKE 266
Query: 171 QP 172
P
Sbjct: 267 TP 268
>gi|195332305|ref|XP_002032839.1| GM20997 [Drosophila sechellia]
gi|194124809|gb|EDW46852.1| GM20997 [Drosophila sechellia]
Length = 763
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 283 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 342
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 343 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 401
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 402 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 436
>gi|357621997|gb|EHJ73625.1| RNA-binding protein lark [Danaus plexippus]
Length = 341
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGNLS TTDADL+ LF KFG + V R++ FV+ + + + A L G
Sbjct: 8 KIFVGNLSDKTTDADLRPLFEKFGTV--VECDIVRNYGFVHMENEQVGREAIQNLNGEVV 65
Query: 82 RGNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
G IKIE A+ P+ P+ ++VG ++ E+ E F KFG + + ++ N F
Sbjct: 66 HGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR--NYGF 123
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
V D EA+K +NG + G+ ++V SR Q P D GRG +S
Sbjct: 124 VHLDASGDVNEAIKELNGMMVDGQPMKVQL---STSRVRQRPGMGDPEQCYRCGRGGHWS 180
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 15 KEAP--PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAA 72
++AP P++ ++VGNL+ T +++ELF KFG + V R++ FV+ D A
Sbjct: 78 RKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGFVHLDASGDVNEA 135
Query: 73 KDALQGSDFRGNPIKIEFA 91
L G G P+K++ +
Sbjct: 136 IKELNGMMVDGQPMKVQLS 154
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 40/275 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 10 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 69
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 70 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 129
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A+ ++ G+ +GG Q+R ++ +P +
Sbjct: 130 DMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK--------- 180
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
S ++ K+ + V N+ P + ++ G S + +Q++
Sbjct: 181 -----------STQENSTKQLRFEDVV--NQSSPKNCTVYCGGIAS-GLTDQLMRQTFSP 226
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 227 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 261
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 97 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 157 MGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 216
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 217 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 276
Query: 171 QP 172
P
Sbjct: 277 SP 278
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 197 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 256
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 257 VSVNGTTIEGHVVKCYWGK 275
>gi|334323885|ref|XP_001381969.2| PREDICTED: putative RNA-binding protein 15 [Monodelphis domestica]
Length = 959
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVEDAKAAKDAL 76
L++GNL T++DL+ F +FG + +V T + ++ F+ F+ ++ + AK A+
Sbjct: 373 TLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPTRGQTSTYGFLKFENLDMSHRAKLAM 432
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G NPIKI + + A P+ LWVGG+ V L F +FG I + K + A
Sbjct: 433 SGKVIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWA 491
Query: 137 FVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 492 YIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 535
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 40/274 (14%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+A + ELFG+ G V T + FV F A A A+ G
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMNGR 60
Query: 80 DFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
G +K+ +A K H++VG +S ++ ++++ F FG I D + +KD
Sbjct: 61 KILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKD 120
Query: 133 GNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARD 186
T FV + DA A++ + G+ +GG Q+R ++ +P+ P + +
Sbjct: 121 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPA-----PKTTNETT 175
Query: 187 GPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILF 246
+ ++ QSS P + ++ G + + EQ++ F
Sbjct: 176 ----------NTKQLSFDEVVNQSS-------PSNCTVYCG-GVTTGLTEQIMRQTFSPF 217
Query: 247 GEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
G I I+ +P + YSFV F S + A A + G
Sbjct: 218 GHIMEIRVFPDKGYSFVRFNSHEAAAHAIVSVNG 251
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS + T D+K FG FG + + T S+ + FV F D
Sbjct: 80 KDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWD 139
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPA----------------------KPSKH-LWVG 103
A+ A + G G I+ +A +PA PS ++ G
Sbjct: 140 AENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCG 199
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
G++ ++++ + + F FG+I + + D +FV ++ E AA A+ ++NG I G +
Sbjct: 200 GVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFVRFNSHEAAAHAIVSVNGTTIEGYVV 259
Query: 164 RV 165
+
Sbjct: 260 KC 261
>gi|327271017|ref|XP_003220284.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein
15-like [Anolis carolinensis]
Length = 1004
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T +DL+ F +FG + +V T + ++ FV F+ ++
Sbjct: 404 DDQRA--NRTLFLGNLDISVTKSDLQRAFDRFGVITEVDLKRPTRGQTSTYGFVKFENLD 461
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G N IKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 462 MAHRAKLAMSGKVLLCNTIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 520
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K + A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 521 DYRKGDSWAYIQYESLDAAQAACTHMRGFPLGGPDRRLRVDF 562
>gi|390458027|ref|XP_003732041.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897271|ref|XP_003911692.1| PREDICTED: ELAV-like protein 2 isoform 6 [Papio anubis]
gi|426361471|ref|XP_004047934.1| PREDICTED: ELAV-like protein 2 isoform 6 [Gorilla gorilla gorilla]
Length = 390
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 45/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAI 127
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 128 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 187
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 188 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 247
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G P
Sbjct: 248 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGW 307
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 308 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 366
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 367 SLNGYRLGDRVLQVSFKTNK 386
>gi|195026607|ref|XP_001986295.1| GH20604 [Drosophila grimshawi]
gi|193902295|gb|EDW01162.1| GH20604 [Drosophila grimshawi]
Length = 793
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +FGK+G +D + + +FAFV ++ ++ A AK
Sbjct: 314 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 373
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S ++E F +FG I+ ++ K
Sbjct: 374 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQIEREFDRFGAIKKIEYQKGEP 432
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 433 YAYIQYETVEAATSAVKEMRGFPLGGPERRLRTDF 467
>gi|348514898|ref|XP_003444977.1| PREDICTED: putative RNA-binding protein 15-like [Oreochromis
niloticus]
Length = 855
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL +ADL+ F +FG + +V T + ++ F+ F+ ++
Sbjct: 298 DDQRA--NRTLFLGNLDITVAEADLRRAFDRFGVITEVDIKRPTRGQTSTYGFLKFENLD 355
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK ++ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 356 MAHRAKLSMSGKIVGRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 414
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 415 DYRKGDTWAYIQYESLDAAQAACTHMRGFPLGGPERRLRVDF 456
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 24/274 (8%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL + ++ L LF G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGNDPYAFIEYSTYQAATTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D +T AFV + + +A A+ +NG+ IG +R ++ R P RE PN
Sbjct: 128 RDPHTMKSKGYAFVSFVKKAEAENAITAMNGQWIGSRSIRTNWSTRKLPPPRE--PNKGG 185
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
+ G + G G +R H V N+ P + ++ G +PP+V D+ ++H
Sbjct: 186 GQGGGMGGGPGGNGSGVKGSQR-HTFEEV-YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 242
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + ++F++F + + A RA E
Sbjct: 243 FVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIE 276
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 51/195 (26%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + +A+ A A
Sbjct: 96 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITA 155
Query: 76 LQGSDFRGNPIKIEFAR-----PAKPSKH------------------------------- 99
+ G I+ ++ P +P+K
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPNKGGGQGGGMGGGPGGNGSGVKGSQRHTFEEVYN 215
Query: 100 --------LWVGGIS-QTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEAL 150
++ GG +S + + + F++FG I+D + KD AF+++ E AA A+
Sbjct: 216 QSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAI 275
Query: 151 KNINGRQIGGEQLRV 165
++ + ++ G Q++
Sbjct: 276 EHTHNSEVHGNQVKC 290
>gi|73959300|ref|XP_865906.1| PREDICTED: putative RNA-binding protein 15 isoform 3 [Canis lupus
familiaris]
Length = 957
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 367 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 424
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 425 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 483
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 484 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 536
>gi|57088155|ref|XP_537035.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Canis lupus
familiaris]
Length = 969
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 367 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 424
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 425 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 483
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 484 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 536
>gi|301785870|ref|XP_002928350.1| PREDICTED: putative RNA-binding protein 15-like [Ailuropoda
melanoleuca]
Length = 970
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 143/339 (42%), Gaps = 50/339 (14%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 103 CPSPMQTGPTNDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 157
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 158 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 217
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 218 KELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPI 277
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKR 205
V F L P+RR P H A R ++ G S
Sbjct: 278 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKSRFSPITI 337
Query: 206 SHPQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPS 257
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 338 DSMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 396
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 397 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 435
>gi|281340783|gb|EFB16367.1| hypothetical protein PANDA_018274 [Ailuropoda melanoleuca]
Length = 956
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 86.3 bits (212), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 55/287 (19%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+A + +LF + G T + + FV F A +A A+ G
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMNGR 109
Query: 80 DFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLKF 121
G +K+ +A K H++VG +S ++ E+++ F F
Sbjct: 110 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQASQDHFHVFVGDLSPEITTEDIKAAFAPF 169
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 170 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 229
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQ 233
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 230 K------------------------STYESNTKQLSYDDVVNQSSPSNCTVYCGGVTS-G 264
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ EQ++ FG+I I+ +P + YSFV F S + A A + G
Sbjct: 265 LTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 311
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 147 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 206
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 207 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLT 266
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++ + +
Sbjct: 267 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 326
Query: 171 QP 172
P
Sbjct: 327 TP 328
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 11 AYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
+YDD + +P + ++ G +++ T+ +++ F FG + ++ + + ++FV F E
Sbjct: 241 SYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 300
Query: 68 DAKAAKDALQGSDFRGNPIKIEFAR 92
A A ++ G+ G+ +K + +
Sbjct: 301 SAAHAIVSVNGTTIEGHVVKCYWGK 325
>gi|158292616|ref|XP_314009.4| AGAP005127-PA [Anopheles gambiae str. PEST]
gi|157017075|gb|EAA09465.4| AGAP005127-PA [Anopheles gambiae str. PEST]
Length = 790
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + +D +L+ +FGK+G ++ + + +FAFV ++ ++ A AK
Sbjct: 304 TRTLFAGNLEINISDDELRRIFGKYGLVEDIDIKRPAPGTGNAFAFVRYQTLDMAHRAKV 363
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++ K
Sbjct: 364 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGAWTSVTQLEREFDRFGAIKKIEYAKGDT 422
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
AF+ Y ++ A A+K + G +GG ++R+DF
Sbjct: 423 QAFILYDSIDAATAAVKEMRGFALGGPDRRIRIDF 457
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 71 RKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVK 130
Query: 132 DGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSHD 183
D T FV + D A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 131 DMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQ 190
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R ++ N+ P + ++ G S + +Q++
Sbjct: 191 LRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTF 225
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 262
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F D + A
Sbjct: 98 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVH 157
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 217
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 218 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Query: 171 QP 172
P
Sbjct: 278 SP 279
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 198 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 257
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 258 VSVNGTTIEGHVVKCYWGK 276
>gi|427776791|gb|JAA53847.1| Putative spenito [Rhipicephalus pulchellus]
Length = 608
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD +A + L+VGNL T+ DL+ +F ++G ++ + ++AF+ F ++
Sbjct: 225 DDDKA--TRTLFVGNLEVPITEPDLRRIFSRYGVVEDIDIKRPPPGQGNAYAFIKFVNLD 282
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK + G KI + + A PS +WVGG+ S LE F +FG I
Sbjct: 283 MAHRAKVEMSGQYIGKFQCKIGYGK-ATPSTRIWVGGLGSWTSMSVLEREFDRFGLIRKI 341
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQWPNS 181
+++K + A++++ ++ A A + + G +GG ++LRVDF P+ +P +
Sbjct: 342 EYVKGDSHAYIQFDSIDAATSACQQMRGAPLGGADKRLRVDFAHPDPTAYAAYPGA 397
>gi|5916179|gb|AAD55931.1|AF156529_1 Msx2 interacting nuclear target protein [Mus musculus]
Length = 3576
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 370 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 429
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 430 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 488
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +EDA A+K GR+IGG +++VDF
Sbjct: 489 LVLYSEIEDAQAAVKETKGRKIGGNKIKVDF 519
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL + D LK+ LF +F KVT+ S
Sbjct: 251 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSIDTSLKDGLFHEFKKFGKVTSVQIHGASEER 310
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 311 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKA 369
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 370 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 429
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 430 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 477
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +EDA+AA +G
Sbjct: 448 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAAVKETKG 507
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 508 RKIGGNKIKVDFA 520
>gi|37999864|sp|Q62504.2|MINT_MOUSE RecName: Full=Msx2-interacting protein; AltName:
Full=SMART/HDAC1-associated repressor protein; AltName:
Full=SPEN homolog
Length = 3644
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 438 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 497
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 498 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 556
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +EDA A+K GR+IGG +++VDF
Sbjct: 557 LVLYSEIEDAQAAVKETKGRKIGGNKIKVDF 587
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL + D LK+ LF +F KVT+ S
Sbjct: 319 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSIDTSLKDGLFHEFKKFGKVTSVQIHGASEER 378
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 379 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKA 437
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 438 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 497
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 498 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 545
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +EDA+AA +G
Sbjct: 516 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAAVKETKG 575
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 576 RKIGGNKIKVDFA 588
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
>gi|73959298|ref|XP_865892.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Canis lupus
familiaris]
Length = 1042
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 367 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 424
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 425 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 483
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 484 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 536
>gi|120587001|ref|NP_062737.2| msx2-interacting protein [Mus musculus]
Length = 3643
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 439 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 498
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 499 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 557
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +EDA A+K GR+IGG +++VDF
Sbjct: 558 LVLYSEIEDAQAAVKETKGRKIGGNKIKVDF 588
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 320 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 379
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 380 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKA 438
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 439 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 498
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 499 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 546
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +EDA+AA +G
Sbjct: 517 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAAVKETKG 576
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 577 RKIGGNKIKVDFA 589
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
>gi|410967944|ref|XP_003990473.1| PREDICTED: putative RNA-binding protein 15 isoform 3 [Felis catus]
Length = 958
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|13094237|dbj|BAB32786.1| Msx-2 interacting nuclear target protein [Mus musculus]
Length = 3551
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 370 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 429
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 430 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 488
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +EDA A+K GR+IGG +++VDF
Sbjct: 489 LVLYSEIEDAQAAVKETKGRKIGGNKIKVDF 519
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 251 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 310
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 311 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKA 369
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 370 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 429
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 430 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 477
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +EDA+AA +G
Sbjct: 448 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAAVKETKG 507
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 508 RKIGGNKIKVDFA 520
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDK----VTTYSSRSFAFVYFKRVEDAKAAK 73
P S +VGNLS D T+ + ++F + G V T + + FV F A A+
Sbjct: 9 PLVSFRYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASL 68
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIED 126
A+ G G +K+ +A K H++VG +S ++ ++++ F FG I D
Sbjct: 69 AAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISD 128
Query: 127 FKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
+ +KD T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 ARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK---T 185
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
++++ + F D N+ P + ++ G S + EQ++
Sbjct: 186 TYESNSKQLC-----FDDV--------------VNQSSPSNCTVYCG-GVSTGLTEQLMR 225
Query: 241 NAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG I I+ +P + YSFV F S + A A + G
Sbjct: 226 QTFSPFGPIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 265
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K FG FG + + T S+ + FV F DA+ A
Sbjct: 101 HVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 160
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P SK L + GG+S ++
Sbjct: 161 MGGQWLGGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLT 220
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++ + +
Sbjct: 221 EQLMRQTFSPFGPIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGKE 280
Query: 171 QP 172
P
Sbjct: 281 TP 282
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 11 AYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
+DD + +P + ++ G +S T+ +++ F FG + ++ + + ++FV F E
Sbjct: 195 CFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGYSFVRFNSHE 254
Query: 68 DAKAAKDALQGSDFRGNPIKIEFAR 92
A A ++ GS G+ +K + +
Sbjct: 255 SAAHAIVSVNGSSIEGHVVKCYWGK 279
>gi|449271637|gb|EMC81921.1| Putative RNA-binding protein 15, partial [Columba livia]
Length = 568
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L++GNL +++DL+ F +FG + +V + ++ F+ F+ ++
Sbjct: 3 DDQRA--NRTLFLGNLDITVSESDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLD 60
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 61 MAHRAKLAMSGKVLLRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 119
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K + A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 120 DYRKGDSWAYIQYESLDAAQAACTHMRGFPLGGPDRRLRVDF 161
>gi|410967942|ref|XP_003990472.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Felis catus]
Length = 982
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|402855599|ref|XP_003892407.1| PREDICTED: putative RNA-binding protein 15 [Papio anubis]
Length = 969
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|344275625|ref|XP_003409612.1| PREDICTED: putative RNA-binding protein 15 [Loxodonta africana]
Length = 968
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 25/274 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL + ++ L LFG G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D +T AFV + + +A A++ +NG+ IG +R ++ R P RE P+
Sbjct: 128 RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE--PSKGG 185
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
+ G + G S + + + + N+ P + ++ G +PP+V D+ ++H
Sbjct: 186 GQGGGMGGGPGNGSGVKGSQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 241
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + +SF++F + + A A E
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 25/274 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL + ++ L LFG GA+ + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGNDPYAFIEYSNYQAASTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D T AFV + + +A A++ +NG+ IG +R ++ R P RE S
Sbjct: 128 RDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE----SSK 183
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
G + + H V N+ P + ++ G +PP+V D+ ++H
Sbjct: 184 GGGLGGGMGGGPGNGGGVKSNQRHTFDEV-YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 241
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
FG I+ ++ + + ++F++F + D A A E
Sbjct: 242 FGQFGPIQDVRVFKDKGFAFIKFVTKDSAAHAIE 275
>gi|338725322|ref|XP_003365114.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Equus
caballus]
Length = 958
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 57/307 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
L+VGNLS D T+A + +LF + G + V T + + FV F A AA A+
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 68
Query: 77 QGSDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGF 118
G G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 128
Query: 119 LKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 188
Query: 173 SRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPP 230
+ S Y+ + Q S N+ P + ++ G
Sbjct: 189 PAPK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 224
Query: 231 SVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
S + EQ++ FG+I I+ +P + YSFV F S + A A + G +
Sbjct: 225 S-GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 283
Query: 291 MFSSSEL 297
+ L
Sbjct: 284 YWGKETL 290
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 109 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 168
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 169 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 228
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 229 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 283
>gi|395821537|ref|XP_003784094.1| PREDICTED: putative RNA-binding protein 15 isoform 3 [Otolemur
garnettii]
Length = 960
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|335287222|ref|XP_003355304.1| PREDICTED: putative RNA-binding protein 15 [Sus scrofa]
Length = 959
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|410967940|ref|XP_003990471.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Felis catus]
Length = 970
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 44/276 (15%)
Query: 24 WVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 62
Query: 80 DFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
G +K+ +A K H++VG +S ++ E+++ F FG I D + +KD
Sbjct: 63 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 122
Query: 133 GNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWPNSHDA 184
T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q N+
Sbjct: 123 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL 182
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
R ++ N+ P + ++ G S + +Q++
Sbjct: 183 RFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTFS 217
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 218 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 253
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 89 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 148
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 149 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 208
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 209 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 268
Query: 171 QP 172
P
Sbjct: 269 SP 270
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 189 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 248
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 249 VSVNGTTIEGHVVKCYWGK 267
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 31/188 (16%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
N++V NLS TTD +LK++FG+FG + S+ F F+ F+ EDA A ++L
Sbjct: 218 NVYVKNLSESTTDDELKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESL 277
Query: 77 QGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELE 115
G F R +K +F + AK + +L+V + T+ E+L+
Sbjct: 278 NGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLK 337
Query: 116 EGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
E F +FG I K ++D + + FV +S E+A+ AL +NG+ I + L V +
Sbjct: 338 ELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQR 397
Query: 171 QPSRREQW 178
+ RR +
Sbjct: 398 KEERRAKL 405
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 68/291 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
S++L+VG+L + TD+ L +LF + G + V +T S + +V + DA A
Sbjct: 37 STSLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAM 96
Query: 74 DALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L + G I++ ++ S ++++ + +++ + L + F FGNI K
Sbjct: 97 EMLNFTPVNGKSIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILSCK 156
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRV-DFLRSQPSRREQWPNSH 182
D N FV+Y E A A+ +NG + +Q+ V FLR Q RE
Sbjct: 157 IATDSNGQSKGYGFVQYDNEESAQGAIDKLNGMLMNDKQVYVGHFLRKQ--EREST---- 210
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
TG + + Y ++ +S+ D+++
Sbjct: 211 -----------TGMTKFQNVYVKNLSESTT----------------------DDELKK-- 235
Query: 243 MILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+FGE I S S+ + F+ F + ++A +A E L G+ F+D
Sbjct: 236 --VFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDD 284
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 51/288 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
S+N+++ NL + L + F FG + K+ T S S+ + FV + E A+ A D
Sbjct: 125 SANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKGYGFVQYDNEESAQGAID 184
Query: 75 ALQGSDFRGNPIKI-EFARPAKPS--------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + F R + ++++V +S++ + +EL++ F +FGNI
Sbjct: 185 KLNGMLMNDKQVYVGHFLRKQERESTTGMTKFQNVYVKNLSESTTDDELKKVFGEFGNIT 244
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++D + F+ + EDAA+A++++NG++ ++ V + + R ++ +
Sbjct: 245 SAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSEREQELKS 304
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
+ + + G + L+V +D++ L
Sbjct: 305 KFEQTAKEAVDKYQGLN--------------------------LYVKNLDDT-IDDEKLK 337
Query: 241 NAMILFGEIERIK-----SYPSRNYSFVEFRSVDEARRAKEGLQGRLF 283
FG I K S SR FV F + +EA RA + G++
Sbjct: 338 ELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMI 385
>gi|426216198|ref|XP_004002353.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15
[Ovis aries]
Length = 967
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 365 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 422
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 423 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 481
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 482 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 534
>gi|291398305|ref|XP_002715834.1| PREDICTED: RNA binding motif protein 15 [Oryctolagus cuniculus]
Length = 962
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT+ DLK++FG++GA+ SR F FV F+ +DA + +A
Sbjct: 208 NNVYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGKSRCFGFVNFENPDDAARSVEA 267
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G F R +K +F + K + +L+V + +++ ++L
Sbjct: 268 LNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLNLYVKNLDDSITDDKL 327
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +FG I K ++D N + FV YS E+A++AL +NG+ I + L V +
Sbjct: 328 KELFSEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMNGKMIVSKPLYVALAQ 387
Query: 170 SQPSRR 175
+ RR
Sbjct: 388 RKEERR 393
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 52/283 (18%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
S++L+VG+L + T+ L +LF + G + + T+ S + +V + V DA A
Sbjct: 28 STSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQAL 87
Query: 74 DALQGSDFRGNPIKIEFA-RPAKPSK----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L + G PI+I ++ R K ++++ + + + + L + F FGNI K
Sbjct: 88 EVLNFTPVNGKPIRIMYSYRDPTIRKSGAGNIYIKNLDKAIDNKALHDTFSAFGNILSCK 147
Query: 129 FLKDG-----NTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D FV++ E A A+ +NG + +Q+ V FLR Q RE
Sbjct: 148 VATDSAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRRQ--ERES----- 200
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
GT + ++ Y ++ +++ + K ++ Y
Sbjct: 201 ----------GTDKTKFNNVYVKNLSETTTEEDL-----KKIFGEY-------------G 232
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
I + R SR + FV F + D+A R+ E L G+ F++
Sbjct: 233 AITSAVVMRDGDGKSRCFGFVNFENPDDAARSVEALNGKTFDE 275
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 34/202 (16%)
Query: 8 FNRAYDDKEAPPSS---NLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFA 59
F R D + A + N++V NL TT+ADLK +FG++GA+ S+ F
Sbjct: 187 FQRKQDRESALSGTKFNNVYVKNLFEATTEADLKSIFGEYGAITSAVVMRDVDGKSKGFG 246
Query: 60 FVYFKRVEDAKAAKDALQGSDFRGNPIKIEFA------------RPAKPSK--------- 98
FV F VEDA A +AL G +F G + A R + +K
Sbjct: 247 FVNFANVEDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKERNEQSTKETVDKYHGT 306
Query: 99 HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNI 153
+L++ + +V EEL E F +FG I K ++D + FV +S E A+ AL +
Sbjct: 307 NLYIKNLDDSVGDEELRELFSEFGTITSCKVMRDPSGISRGSGFVAFSIAEGASWALGEM 366
Query: 154 NGRQIGGEQLRVDFLRSQPSRR 175
NG+ + G+ L V + + RR
Sbjct: 367 NGKMVAGKPLYVALAQRKEDRR 388
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 68/288 (23%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+L+VG+L D D L +LF + + V T S + +V F DA A D
Sbjct: 25 SLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDV 84
Query: 76 LQGSDFRGNPIKIEF------ARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L + G I+I + AR + + ++++ + + + + L + F FGNI K
Sbjct: 85 LNFTPLNGKTIRIMYSIRDPSARKSG-AANVFIKNLDKAIDHKALFDTFSAFGNILSCKI 143
Query: 130 LKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDA 184
D + FV++ E A A+ +NG I +Q+ V P +R+Q
Sbjct: 144 ATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVG-----PFQRKQ------- 191
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
D SA + + +N + + + D +
Sbjct: 192 -------------DRESALSGTKFNNVYVKNL-----------FEATTEADLKS------ 221
Query: 245 LFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFN 284
+FGE I S S+ + FV F +V++A +A E L G+ F+
Sbjct: 222 IFGEYGAITSAVVMRDVDGKSKGFGFVNFANVEDAAKAVEALNGKNFD 269
>gi|395821535|ref|XP_003784093.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Otolemur
garnettii]
Length = 972
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|358411386|ref|XP_614275.4| PREDICTED: putative RNA-binding protein 15 isoform 1 [Bos taurus]
gi|359063913|ref|XP_002686230.2| PREDICTED: putative RNA-binding protein 15 isoform 1 [Bos taurus]
Length = 958
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|351704318|gb|EHB07237.1| Putative RNA-binding protein 15 [Heterocephalus glaber]
Length = 913
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 325 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 382
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 383 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 441
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 442 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 494
>gi|332237583|ref|XP_003267985.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Nomascus
leucogenys]
Length = 977
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|332237581|ref|XP_003267984.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Nomascus
leucogenys]
Length = 969
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|390466316|ref|XP_003733563.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Callithrix
jacchus]
Length = 978
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|363743160|ref|XP_003642784.1| PREDICTED: putative RNA-binding protein 15-like [Gallus gallus]
Length = 889
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD+ A + L++GNL ++ DL+ F +FG + +V + ++ F+ F+ ++
Sbjct: 293 DDQRA--NRTLFLGNLDITVSETDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLD 350
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 351 MAHRAKLAMSGKVLLRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 409
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K + A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 410 DYRKGDSWAYIQYESLDAAQAACTHMRGFPLGGPDRRLRVDF 451
>gi|321456772|gb|EFX67872.1| hypothetical protein DAPPUDRAFT_330660 [Daphnia pulex]
Length = 739
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +FG +G ++ V + ++AFV F+ ++ A K
Sbjct: 291 TRTLFAGNLEINITEEELRRIFGNYGIVEDVDIKRPPPGTGNAYAFVRFENLDQANRCKV 350
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G +KI + + A P+ +WVGG+ S +LE F +FG I+ ++ K
Sbjct: 351 ELSGQYIGKFQVKIGYGK-ATPTTRIWVGGLGSWTSLAQLEREFDRFGAIKKIEYNKGDT 409
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
+A++ Y +E A A++++ G +GG +L+ DF+ + P
Sbjct: 410 SAYILYETIEAAQAAVQDMRGFCLGGPDRKLKTDFVDTNP 449
>gi|335287220|ref|XP_001929412.3| PREDICTED: putative RNA-binding protein 15 isoform 1 [Sus scrofa]
Length = 1006
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|296489432|tpg|DAA31545.1| TPA: OTT-MAL-like [Bos taurus]
Length = 992
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|149708732|ref|XP_001496267.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Equus
caballus]
Length = 960
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|338725325|ref|XP_003365115.1| PREDICTED: putative RNA-binding protein 15 isoform 3 [Equus
caballus]
Length = 971
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|14161373|gb|AAK54724.1|AF368064_1 putative RNA-binding motif protein 15 long form [Homo sapiens]
Length = 957
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|395821533|ref|XP_003784092.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Otolemur
garnettii]
Length = 964
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|335287224|ref|XP_003355305.1| PREDICTED: putative RNA-binding protein 15 [Sus scrofa]
Length = 972
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|297664148|ref|XP_002810514.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Pongo abelii]
Length = 969
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|440909660|gb|ELR59545.1| Putative RNA-binding protein 15, partial [Bos grunniens mutus]
Length = 990
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|14140099|emb|CAC38861.1| one twenty two protein [Homo sapiens]
gi|119576842|gb|EAW56438.1| RNA binding motif protein 15, isoform CRA_a [Homo sapiens]
Length = 957
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|403284226|ref|XP_003933479.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 977
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDA 69
+ P ++ L+ GNL + A L + ++G + V T SR FAFV +ED
Sbjct: 102 QVPVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDC 161
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKPSK--------HLWVGGISQTVSKEELEEGFLKF 121
+ + L GS + G +++ FA KP + L++G +S +V+ E L + F ++
Sbjct: 162 ETVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEY 221
Query: 122 GNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
GN+ + L DG T FV YS E+ AL+++NG ++ G LRV + S
Sbjct: 222 GNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSLAEGRKS 279
>gi|403284224|ref|XP_003933478.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 970
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|38565992|gb|AAH62316.1| RBM15 protein, partial [Homo sapiens]
gi|39644750|gb|AAH06397.2| RBM15 protein, partial [Homo sapiens]
Length = 957
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 348 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 405
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 406 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 464
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 465 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 517
>gi|14161369|gb|AAK54722.1|AF368062_1 putative RNA-binding motif protein 15 short form [Homo sapiens]
Length = 969
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 44/281 (15%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKD 74
P + +VGNLS D T+ + +LF + G + +T ++S + FV F DA AA
Sbjct: 109 PQDSGYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 168
Query: 75 ALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A+ G G +K+ +A K H++VG +S ++ E+++ F FG I D
Sbjct: 169 AMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 228
Query: 128 KFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS--RREQWP 179
+ +KD T FV + DA A+ ++ G+ +GG Q+R ++ +P + Q
Sbjct: 229 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQEN 288
Query: 180 NSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQML 239
N+ R ++ N+ P + ++ G S + +Q++
Sbjct: 289 NTKQLRFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLM 323
Query: 240 HNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 324 RQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 364
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 31/189 (16%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS + T D+K F FG + + T S+ + FV F D
Sbjct: 193 KDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLD 252
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVG 103
A+ A + G G I+ +A +P P +K L + G
Sbjct: 253 AENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCG 312
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
GI+ ++ + + + F FG I + + + +FV +S E AA A+ ++NG I G +
Sbjct: 313 GIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVV 372
Query: 164 RVDFLRSQP 172
+ + + P
Sbjct: 373 KCYWGKESP 381
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 43/81 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 300 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 359
Query: 74 DALQGSDFRGNPIKIEFARPA 94
++ G+ G+ +K + + +
Sbjct: 360 VSVNGTTIEGHVVKCYWGKES 380
>gi|14161371|gb|AAK54723.1| putative RNA-binding motif protein 15 short form plus alternative
exon [Homo sapiens]
Length = 977
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|296208783|ref|XP_002751239.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Callithrix
jacchus]
Length = 970
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|73695234|gb|AAI03494.1| RBM15 protein [Homo sapiens]
Length = 969
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|47933339|ref|NP_073605.4| putative RNA-binding protein 15 isoform 1 [Homo sapiens]
gi|397478750|ref|XP_003810700.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Pan paniscus]
gi|32363506|sp|Q96T37.2|RBM15_HUMAN RecName: Full=Putative RNA-binding protein 15; AltName:
Full=One-twenty two protein 1; AltName: Full=RNA-binding
motif protein 15
gi|119576844|gb|EAW56440.1| RNA binding motif protein 15, isoform CRA_c [Homo sapiens]
Length = 977
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|319996623|ref|NP_001188474.1| putative RNA-binding protein 15 isoform 2 [Homo sapiens]
gi|114559018|ref|XP_524800.2| PREDICTED: putative RNA-binding protein 15 isoform 2 [Pan
troglodytes]
gi|397478748|ref|XP_003810699.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Pan paniscus]
gi|14140100|emb|CAC38862.1| one twenty two protein [Homo sapiens]
gi|66990081|gb|AAH98140.1| RBM15 protein [Homo sapiens]
gi|73695337|gb|AAI03508.1| RBM15 protein [Homo sapiens]
gi|119576843|gb|EAW56439.1| RNA binding motif protein 15, isoform CRA_b [Homo sapiens]
Length = 969
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|358411388|ref|XP_003582008.1| PREDICTED: putative RNA-binding protein 15 [Bos taurus]
gi|359063916|ref|XP_003585900.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Bos taurus]
Length = 971
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 369 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 426
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 427 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 485
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 486 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 538
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 42/285 (14%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVED 68
+D+ P + L+VGNLS D T+ + +LF + G + +T ++S + FV F D
Sbjct: 2 EDESHPKT--LYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFYEHRD 59
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKF 121
A AA A+ G G +K+ +A K H++VG +S ++ +++ F F
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPF 119
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++ +P
Sbjct: 120 GKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAP 179
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
+ N+ DA S Y+ QSS P + ++ G S +
Sbjct: 180 K---NTQDA------------SPKQLRYEDVVNQSS-------PQNCTVYCGGIQS-GLS 216
Query: 236 EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ ++ FG+I I+ +P + YSF+ F S + A A + G
Sbjct: 217 DHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNG 261
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D++ F FG + +TT S+ + FV F DA+ A
Sbjct: 97 HVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVH 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKPSKH-----------------------LWVGGISQTVS 110
+ G G I+ +A +P P ++ GGI +S
Sbjct: 157 MGGQWLGGRQIRTNWATRKPPAPKNTQDASPKQLRYEDVVNQSSPQNCTVYCGGIQSGLS 216
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + F FG I + + + +F+ +S E AA A+ ++NG I G ++ + +
Sbjct: 217 DHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKE 276
Query: 171 QP 172
P
Sbjct: 277 SP 278
>gi|426330715|ref|XP_004026352.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Gorilla
gorilla gorilla]
Length = 977
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|426330713|ref|XP_004026351.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Gorilla
gorilla gorilla]
Length = 969
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|60656279|gb|AAX32703.1| RNA binding motif protein 15 [synthetic construct]
Length = 933
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 324 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 381
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 382 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 440
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 441 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 493
>gi|60653225|gb|AAX29307.1| RNA binding motif protein 15 [synthetic construct]
Length = 934
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 324 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 381
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 382 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 440
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 441 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 493
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|118480583|tpg|DAA05818.1| TPA_exp: RNA binding motif protein 15 isoform L2 [Homo sapiens]
Length = 913
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 324 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 381
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 382 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 440
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 441 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 493
>gi|407852101|gb|EKG05754.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 746
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 44/203 (21%)
Query: 13 DDKEAPPSSNLWVGNLSA-DTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ P++ +WVGNL + T+ L+ F +FG + ++ +S+ FV+F+ VE+A+
Sbjct: 177 EDELREPTNTVWVGNLDLHEHTEEALRREFSEFGGVIRIARVPDKSYCFVHFRYVEEARN 236
Query: 72 AKDAL--QGSDFRGN----------------PIKIEFARPAK------------------ 95
A +AL +GS R P + RP++
Sbjct: 237 AVEALSARGSLGRARFNYGKMFEYTQEELEIPRDVTGHRPSRRGREEDRHDNDDRRRRSR 296
Query: 96 -------PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAE 148
P+ LW+G + TVS EEL E F FG I+ L N AF+ + +ED +
Sbjct: 297 REEERMEPTNVLWLGDLPPTVSNEELNENFKVFGKIKTISRLDSRNMAFIHFETIEDCTQ 356
Query: 149 ALKNINGRQIGGEQLRVDFLRSQ 171
AL + + IGG ++ +++ R+Q
Sbjct: 357 ALDLMRDQPIGGARVVLNYGRAQ 379
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ LW+G+L ++ +L E F FG + ++ SR+ AF++F+ +ED A D ++
Sbjct: 304 PTNVLWLGDLPPTVSNEELNENFKVFGKIKTISRLDSRNMAFIHFETIEDCTQALDLMRD 363
Query: 79 SDFRGNPIKIEFARPAK-------------------PSKHLWVGGISQTVSKEELEEGFL 119
G + + + R + P+ +++G ++ V++ ++E+ F
Sbjct: 364 QPIGGARVVLNYGRAQRNPTSTEIGLTPDGIPVNETPTNVVYLGQLASDVTEGDVEDLFE 423
Query: 120 KFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
F + KF++ AF + +E A A +N + G LR+ F +S
Sbjct: 424 TFEGFINSKFIQSSGIAFGHFDSIEHARAARIALNNALLRGAPLRISFGKS 474
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 95 KPSKHLWVGGIS-QTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
+P+ +WVG + ++E L F +FG + + D + FV + +E+A A++ +
Sbjct: 182 EPTNTVWVGNLDLHEHTEEALRREFSEFGGVIRIARVPDKSYCFVHFRYVEEARNAVEAL 241
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
+ R G + R ++ + +E+ D RG + + S
Sbjct: 242 SARGSLG-RARFNYGKMFEYTQEELEIPRDVTGHRPSRRG---REEDRHDNDDRRRRSRR 297
Query: 214 RNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
P+ +LW+G PP+V +E L+ +FG+I+ I SRN +F+ F ++++
Sbjct: 298 EEERMEPTNVLWLGDLPPTVSNEE--LNENFKVFGKIKTISRLDSRNMAFIHFETIEDCT 355
Query: 273 RAKEGLQGRLFNDPRITIMFSSSELAP 299
+A + ++ + R+ + + ++ P
Sbjct: 356 QALDLMRDQPIGGARVVLNYGRAQRNP 382
>gi|307188505|gb|EFN73242.1| Putative RNA-binding protein 15B [Camponotus floridanus]
Length = 772
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 307 TRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 366
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 367 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDS 425
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 426 NAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRVDFADVTP 465
>gi|28958098|gb|AAH47479.1| RBM15 protein, partial [Homo sapiens]
Length = 959
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 358 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 415
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 416 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 474
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 475 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 527
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 25/274 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL + ++ L LFG G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D +T AFV + + +A A++ +NG+ IG +R ++ R P RE P+
Sbjct: 128 RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE--PSKGG 185
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
+ G + G S + + + + N+ P + ++ G +PP+V D+ ++H
Sbjct: 186 GQGGGMGGGPGNGSGVKGSQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 241
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I ++ + + +SF++F + + A A E
Sbjct: 242 FVQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAIE 275
>gi|431896472|gb|ELK05884.1| Putative RNA-binding protein 15 [Pteropus alecto]
Length = 947
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 325 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 382
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 383 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 441
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 442 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 494
>gi|10433990|dbj|BAB14088.1| unnamed protein product [Homo sapiens]
Length = 925
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 324 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 381
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 382 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 440
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 441 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 493
>gi|354506098|ref|XP_003515103.1| PREDICTED: putative RNA-binding protein 15-like [Cricetulus
griseus]
Length = 960
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 367 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 424
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 425 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 483
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 484 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 536
>gi|109467371|ref|XP_001068152.1| PREDICTED: putative RNA-binding protein 15-like [Rattus norvegicus]
gi|392345990|ref|XP_003749428.1| PREDICTED: putative RNA-binding protein 15-like [Rattus norvegicus]
gi|149025632|gb|EDL81875.1| rCG28930, isoform CRA_b [Rattus norvegicus]
Length = 962
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 367 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 424
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 425 MSHRAKIAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 483
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 484 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 536
>gi|60360206|dbj|BAD90348.1| mKIAA4257 protein [Mus musculus]
Length = 959
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|383858004|ref|XP_003704493.1| PREDICTED: uncharacterized protein LOC100876513 [Megachile
rotundata]
Length = 772
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 308 TRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 367
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 368 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDS 426
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 427 NAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRVDFADVTP 466
>gi|148681432|gb|EDL13379.1| SPEN homolog, transcriptional regulator (Drosophila), isoform CRA_a
[Mus musculus]
Length = 3186
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 371 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 430
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 431 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 489
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +EDA A+K GR+IGG +++VDF
Sbjct: 490 LVLYSEIEDAQAAVKETKGRKIGGNKIKVDF 520
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 42/209 (20%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL +TD LK+ LF +F KVT+ S + V+F++ ED + A A
Sbjct: 271 IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEERYGLVFFRQQEDQEKALTAS 330
Query: 77 QGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGISQTVSKEELE 115
+G F G I++ EF RP K ++ L++G + +T + +L
Sbjct: 331 KGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKATRTLFIGNLEKTTTYHDLR 389
Query: 116 EGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
F +FG I D K AF++Y + +A+K ++G +G +L++ F +S P
Sbjct: 390 NIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMP 449
Query: 173 SR-----------REQWPNSHDARDGPII 190
+ +Q+ H R GP++
Sbjct: 450 TNCVWLDGLSSNVSDQYLTRHFCRYGPVV 478
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +EDA+AA +G
Sbjct: 449 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAAVKETKG 508
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 509 RKIGGNKIKVDFA 521
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|241240909|ref|XP_002401786.1| hypothetical protein IscW_ISCW005052 [Ixodes scapularis]
gi|215496241|gb|EEC05881.1| hypothetical protein IscW_ISCW005052 [Ixodes scapularis]
Length = 642
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DD +A + L+VGNL ++ADL+ +F ++G ++ V ++AF+ F ++
Sbjct: 245 DDDKA--TRTLFVGNLEVTISEADLRRIFERYGVVEDVDVKRPPPGQGNAYAFIKFLNLD 302
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK + G KI + + A PS +WVGG+ S LE F +FG I
Sbjct: 303 MAHRAKVEMSGQYIGKFQCKIGYGK-ATPSMRIWVGGLGSWTSLAHLEREFDRFGAIRKI 361
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
++K N A+++Y ++ A A + + G +GG ++LRVDF
Sbjct: 362 DWVKGENHAYLQYDSIDAAQAACQEMRGFPLGGPDKRLRVDF 403
>gi|148681433|gb|EDL13380.1| SPEN homolog, transcriptional regulator (Drosophila), isoform CRA_b
[Mus musculus]
Length = 3163
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 371 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 430
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 431 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 489
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +EDA A+K GR+IGG +++VDF
Sbjct: 490 LVLYSEIEDAQAAVKETKGRKIGGNKIKVDF 520
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 42/209 (20%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL +TD LK+ LF +F KVT+ S + V+F++ ED + A A
Sbjct: 271 IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEERYGLVFFRQQEDQEKALTAS 330
Query: 77 QGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGISQTVSKEELE 115
+G F G I++ EF RP K ++ L++G + +T + +L
Sbjct: 331 KGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKATRTLFIGNLEKTTTYHDLR 389
Query: 116 EGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
F +FG I D K AF++Y + +A+K ++G +G +L++ F +S P
Sbjct: 390 NIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMP 449
Query: 173 SR-----------REQWPNSHDARDGPII 190
+ +Q+ H R GP++
Sbjct: 450 TNCVWLDGLSSNVSDQYLTRHFCRYGPVV 478
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +EDA+AA +G
Sbjct: 449 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAAVKETKG 508
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 509 RKIGGNKIKVDFA 521
>gi|328775847|ref|XP_624844.3| PREDICTED: putative RNA-binding protein 15B [Apis mellifera]
gi|380027819|ref|XP_003697614.1| PREDICTED: putative RNA-binding protein 15B-like [Apis florea]
Length = 767
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 307 TRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 366
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 367 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDS 425
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 426 NAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRVDFADVTP 465
>gi|432864864|ref|XP_004070455.1| PREDICTED: putative RNA-binding protein 15-like [Oryzias latipes]
Length = 845
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL + +ADL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 293 DDQRA--NRTLFLGNLDINIAEADLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 350
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK ++ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 351 MAHRAKLSMSGKIVGRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 409
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
+ K A+++Y L+ A A ++ G +GG +LRVDF
Sbjct: 410 DYRKGDTWAYIQYESLDAAQAAWTHMRGFPLGGPERRLRVDF 451
>gi|355745517|gb|EHH50142.1| hypothetical protein EGM_00920, partial [Macaca fascicularis]
Length = 977
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 22/167 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGA-LDKVTTYSSRS-----FAFVYFKRVEDAKAAKDAL 76
L+VGNL+ ++ + E+F + + + ++ +AF+ F EDA+ A ++L
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSL 161
Query: 77 QGSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G D G+ IK+ +A P +PS +++VG +S V+ E L++ F KFG+++
Sbjct: 162 NGKDVNGSDIKVNWAYQSAAIAGGSTPEEPSYNIFVGDLSSEVNDEALKKAFTKFGSLKQ 221
Query: 127 FKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ D T+ FV + + EDA AL+++NG +GG +R ++
Sbjct: 222 AHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGRAIRCNW 268
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 50/210 (23%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGN-IEDFKFLKDGNT-----AFVEYSRLEDAAEAL 150
+K L+VG ++++ S+E++ E F N I+ K L D N AF+E++ EDA +AL
Sbjct: 99 NKILYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKAL 158
Query: 151 KNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS 210
++NG+ + G ++V++ AY+ + +
Sbjct: 159 NSLNGKDVNGSDIKVNW----------------------------------AYQSA---A 181
Query: 211 SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIER------IKSYPSRNYSFVE 264
G + PS ++VG S +++++ L A FG +++ +++ SR Y FV
Sbjct: 182 IAGGSTPEEPSYNIFVG-DLSSEVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVT 240
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
F ++A A + + G I ++S
Sbjct: 241 FGKQEDAENALQSMNGEWLGGRAIRCNWAS 270
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAA 72
PS N++VG+LS++ D LK+ F KFG+L + + T SR + FV F + EDA+ A
Sbjct: 191 PSYNIFVGDLSSEVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENA 250
Query: 73 KDALQGSDFRGNPIKIEFA 91
++ G G I+ +A
Sbjct: 251 LQSMNGEWLGGRAIRCNWA 269
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
+++G I+ E+ FG I DFKF + AFV+Y E AA A+ + G +
Sbjct: 506 VYIGNIAHFTQLHEMIPLLQSFGFIVDFKFHPERGCAFVKYDSHERAALAIIQLAGFNLN 565
Query: 160 GEQLRVDFLRSQPSRREQWPNSHDA 184
G L+ + + +P + + H A
Sbjct: 566 GRPLKCGWGKERPQQYQSRVGGHVA 590
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 61/294 (20%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS---------------------FAFV 61
L+VGNLS D T+ + +LF + G + + ++ + FV
Sbjct: 10 LYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPNANNDPYCFV 69
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 70 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 129
Query: 115 EEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T+ FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 130 KSAFAPFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Query: 169 RSQP--SRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV 226
+P + Q N+ R ++ + T + N + Y +G
Sbjct: 190 TRKPPAPKSTQENNTKQLRFDDVVNQST--AKNCTVYC-----GGIGSG----------- 231
Query: 227 GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ EQ++ +FG+I I+ +P + YSF+ F + D A A + G
Sbjct: 232 -------LTEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNG 278
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 114 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVH 173
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI ++
Sbjct: 174 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFDDVVNQSTAKNCTVYCGGIGSGLT 233
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + + +F+ +S + AA A+ ++NG I G ++ + +
Sbjct: 234 EQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKE 293
Query: 171 QP 172
P
Sbjct: 294 TP 295
>gi|124249066|ref|NP_001039272.1| RNA binding motif protein 15 [Mus musculus]
gi|111308226|gb|AAI20591.1| RNA binding motif protein 15 [Mus musculus]
gi|223459828|gb|AAI37742.1| RNA binding motif protein 15 [Mus musculus]
Length = 962
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 367 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 424
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 425 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 483
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 484 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 536
>gi|348587024|ref|XP_003479268.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein
15-like [Cavia porcellus]
Length = 961
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLKTAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|307198742|gb|EFN79545.1| Putative RNA-binding protein 15B [Harpegnathos saltator]
Length = 774
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 307 TRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 366
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 367 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDS 425
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 426 NAYILYDSIDAAQAAVKEMRGFPLGGPERRLRVDFADVTP 465
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 118/333 (35%), Gaps = 78/333 (23%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK----DGNT-AFVEYSRLEDAAEALK 151
++ L+ G + +++EEL F K+G ++D + GN AFV + L+ A
Sbjct: 307 TRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 366
Query: 152 NINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSS 211
++G+ IG Q ++ Y ++ P +
Sbjct: 367 ELSGQYIGKFQCKI------------------------------------GYGKATPTTR 390
Query: 212 VGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEA 271
+ GP W P L FG I++I + +++ + S+D A
Sbjct: 391 IWVGGLGP-----WTSVP--------QLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAA 437
Query: 272 RRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDML 331
+ A + ++G P + +++ PG + PR G+ RP +D
Sbjct: 438 QAAVKEMRGFPLGGPERRLRVDFADVTPGFGF--------KPRPYPEEGNDFRPRPVDYE 489
Query: 332 GPNQSMQPN-NFAGHLQPADIRGPSMPM---RSIGAHGGHETLLSGPDFKDFHSMQDPNA 387
P P +F + + P R GG+ S P+ M+D
Sbjct: 490 SPYDPYGPEGDFGYGPRGFRGGRGTAPWHDRRGSSTRGGYRG--SYPE----GYMRD--- 540
Query: 388 KNLDPNWRRPSPSPGIRTSPTQGIRQPLNHAPG 420
D +W P P I +G+R+ L+ PG
Sbjct: 541 ---DADWSSRRPPPEIEYEAPRGLRRSLSREPG 570
>gi|344258674|gb|EGW14778.1| Putative RNA-binding protein 15 [Cricetulus griseus]
Length = 912
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 323 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 380
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 381 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 439
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 440 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 492
>gi|198457395|ref|XP_001360651.2| GA15511 [Drosophila pseudoobscura pseudoobscura]
gi|198135960|gb|EAL25226.2| GA15511 [Drosophila pseudoobscura pseudoobscura]
Length = 782
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +F K+G +D + + +FAFV ++ ++ A AK
Sbjct: 301 TRTLFAGNLEVTIADDELRRIFSKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 360
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 361 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 419
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 420 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 454
>gi|195150583|ref|XP_002016230.1| GL11478 [Drosophila persimilis]
gi|194110077|gb|EDW32120.1| GL11478 [Drosophila persimilis]
Length = 782
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL D +L+ +F K+G +D + + +FAFV ++ ++ A AK
Sbjct: 301 TRTLFAGNLEVTIADDELRRIFSKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKI 360
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + P+ +W+GG+ S +LE F +FG I+ ++ K
Sbjct: 361 ELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP 419
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A+++Y +E A A+K + G +GG +LR DF
Sbjct: 420 YAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 454
>gi|340727193|ref|XP_003401933.1| PREDICTED: putative RNA-binding protein 15B-like [Bombus
terrestris]
Length = 770
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 306 TRTLFAGNLEINITEDELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 365
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 366 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDS 424
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 425 NAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRVDFADVTP 464
>gi|432103939|gb|ELK30772.1| Putative RNA-binding protein 15 [Myotis davidii]
Length = 863
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T++DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 267 DDQRA--NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 324
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 325 MSHRAKVAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 383
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ +Q+
Sbjct: 384 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYHQQY 436
>gi|350423266|ref|XP_003493425.1| PREDICTED: putative RNA-binding protein 15B-like [Bombus impatiens]
Length = 770
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 306 TRTLFAGNLEINITEDELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 365
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 366 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDS 424
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 425 NAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRVDFADVTP 464
>gi|332021060|gb|EGI61447.1| Putative RNA-binding protein 15B [Acromyrmex echinatior]
Length = 750
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 285 TRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 344
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 345 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDS 403
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 404 NAYILYDSIDAAQAAVKEMRGFPLGGPERRLRVDFADVTP 443
>gi|71666555|ref|XP_820235.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885572|gb|EAN98384.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 746
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 44/203 (21%)
Query: 13 DDKEAPPSSNLWVGNLSA-DTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ P++ +WVGNL + T+ L+ F +FG + ++ +S+ FV+F+ VE+A+
Sbjct: 177 EDELREPTNTVWVGNLDLHEHTEEVLRSEFSEFGRVIRIARVPDKSYCFVHFRYVEEARN 236
Query: 72 AKDAL--QGSDFRGN----------------PIKIEFARPAK------------------ 95
A +AL +GS R P + RP++
Sbjct: 237 AVEALSARGSLGRARFNYGKMFEYTQEELEMPRDVTGHRPSRRGREEDRHDNDDRRRRSR 296
Query: 96 -------PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAE 148
P+ LW+G + TVS EEL E F FG I+ L N AF+ + +ED +
Sbjct: 297 REEERMEPTNVLWLGDLPPTVSNEELNENFKVFGKIKTISRLDSRNMAFIHFETIEDCTQ 356
Query: 149 ALKNINGRQIGGEQLRVDFLRSQ 171
AL + + IGG ++ +++ R+Q
Sbjct: 357 ALDLMRDQPIGGARVVLNYGRAQ 379
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ LW+G+L ++ +L E F FG + ++ SR+ AF++F+ +ED A D ++
Sbjct: 304 PTNVLWLGDLPPTVSNEELNENFKVFGKIKTISRLDSRNMAFIHFETIEDCTQALDLMRD 363
Query: 79 SDFRGNPIKIEFARPAK-------------------PSKHLWVGGISQTVSKEELEEGFL 119
G + + + R + P+ +++G ++ V++ ++E+ F
Sbjct: 364 QPIGGARVVLNYGRAQRNPTSTETGLTPDGIPVNETPTNVVYLGQLASDVTEGDVEDLFE 423
Query: 120 KFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
F + KF++ AF + +E A A +N + G LR+ F +S
Sbjct: 424 PFEGFINSKFIQSSGIAFGHFDSIEHARAARIALNNALLRGAPLRISFGKS 474
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Query: 95 KPSKHLWVGGISQTVSKEE-LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
+P+ +WVG + EE L F +FG + + D + FV + +E+A A++ +
Sbjct: 182 EPTNTVWVGNLDLHEHTEEVLRSEFSEFGRVIRIARVPDKSYCFVHFRYVEEARNAVEAL 241
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
+ R G + R ++ + +E+ D RG + + S
Sbjct: 242 SARGSLG-RARFNYGKMFEYTQEELEMPRDVTGHRPSRRG---REEDRHDNDDRRRRSRR 297
Query: 214 RNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
P+ +LW+G PP+V +E L+ +FG+I+ I SRN +F+ F ++++
Sbjct: 298 EEERMEPTNVLWLGDLPPTVSNEE--LNENFKVFGKIKTISRLDSRNMAFIHFETIEDCT 355
Query: 273 RAKEGLQGRLFNDPRITIMFSSSELAP 299
+A + ++ + R+ + + ++ P
Sbjct: 356 QALDLMRDQPIGGARVVLNYGRAQRNP 382
>gi|355558256|gb|EHH15036.1| hypothetical protein EGK_01068, partial [Macaca mulatta]
Length = 977
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|322789770|gb|EFZ14936.1| hypothetical protein SINV_14451 [Solenopsis invicta]
Length = 734
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 268 TRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 327
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 328 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDS 386
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 387 NAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRVDFADVTP 426
>gi|51593323|gb|AAH80828.1| Rbm15 protein, partial [Mus musculus]
Length = 946
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 351 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 408
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 409 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 467
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 468 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 520
>gi|34784964|gb|AAH57038.1| Rbm15 protein, partial [Mus musculus]
Length = 953
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 358 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 415
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 416 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 474
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 475 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 527
>gi|432896166|ref|XP_004076291.1| PREDICTED: uncharacterized protein LOC101157077 [Oryzias latipes]
Length = 515
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
L+VGNL D T ++ ++F +G ++ + R +AFV K A A L G ++R
Sbjct: 8 LFVGNLPIDATHEEISKIFSPYGEINTCSLL--RQYAFVTLKGEGAADRAIRHLDGKEYR 65
Query: 83 GNPIKIEFARPAKP-SKHLWVGGISQTVSKEELEEGFLKFGNIEDF-----KFLKDGNTA 136
G P+ +E +R P S ++VG +S T S ++L F FG + D + + A
Sbjct: 66 GRPLVVEESRARPPNSTKIFVGNLSATCSADDLHGLFSTFGRVLDCDKVKARLCSNVGYA 125
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDA 184
FV R E+A A+ +NG G QL V+ ++QP + NS ++
Sbjct: 126 FVHMERKEEAQAAIDALNGTMFKGRQLAVELSKAQPLVNQMSGNSANS 173
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGAL---DKVTT--YSSRSFAFVYFKRVEDAKAA 72
P S+ ++VGNLSA + DL LF FG + DKV S+ +AFV+ +R E+A+AA
Sbjct: 79 PNSTKIFVGNLSATCSADDLHGLFSTFGRVLDCDKVKARLCSNVGYAFVHMERKEEAQAA 138
Query: 73 KDALQGSDFRGNPIKIEFAR 92
DAL G+ F+G + +E ++
Sbjct: 139 IDALNGTMFKGRQLAVELSK 158
>gi|74147567|dbj|BAE38672.1| unnamed protein product [Mus musculus]
Length = 948
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 357 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 414
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 415 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 473
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 474 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 526
>gi|74212055|dbj|BAE40192.1| unnamed protein product [Mus musculus]
Length = 949
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 354 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 411
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 412 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 470
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 471 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 523
>gi|109013397|ref|XP_001100087.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Macaca
mulatta]
Length = 969
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 368 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 425
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 426 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 484
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 485 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 537
>gi|30802064|gb|AAH51409.1| Rbm15 protein, partial [Mus musculus]
Length = 949
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVE 67
DD+ A + L++GNL T+ DL+ F +FG + +V + + ++ F+ F+ ++
Sbjct: 354 DDQRA--NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLD 411
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ AK A+ G NPIKI + + A P+ LWVGG+ V L F +FG I
Sbjct: 412 MSHRAKLAMSGKIIIRNPIKIGYGK-ATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTI 470
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQW 178
+ K + A+++Y L+ A A ++ G +GG +LRVDF ++ ++Q+
Sbjct: 471 DYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQY 523
>gi|328708342|ref|XP_003243663.1| PREDICTED: putative RNA-binding protein 15B-like [Acyrthosiphon
pisum]
Length = 761
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 85/155 (54%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL +D +L+ +FG++G ++ + + ++AFV ++ ++ A AK
Sbjct: 313 TRTLFAGNLEVSISDEELRRIFGRYGVVEDIDVKRPLPGTGNAYAFVRYQNLDMAHRAKV 372
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + + P++ +WVGG+ S +LE+ F +FG I+ +++K
Sbjct: 373 ELSGQYLGKFQCKIGYGK-STPTQRIWVGGLGPWTSLAQLEQEFDRFGVIKKIEYVKGDI 431
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGGEQ--LRVDF 167
A++++ ++ A A+K + G +GG + LR DF
Sbjct: 432 CAYIQFESIDAATAAVKEMRGVALGGSEHKLRTDF 466
>gi|254281259|ref|NP_001156869.1| ELAV-like protein 4 isoform c [Mus musculus]
Length = 356
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 143/339 (42%), Gaps = 64/339 (18%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 34 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 88
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 89 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 148
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 149 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 208
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKR 205
V F L P+RR P H A R PI G
Sbjct: 209 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGM----------- 257
Query: 206 SHPQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPS 257
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 258 ---TSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 313
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 314 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 352
>gi|345490930|ref|XP_001607958.2| PREDICTED: putative RNA-binding protein 15-like [Nasonia
vitripennis]
Length = 740
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + T+ +L+ +F K+G +D + + ++AFV F+ ++ A K
Sbjct: 272 TRTLFAGNLEINITEEELRRIFSKYGIVDDIDIKRPPPGTGNAYAFVRFQTLDMAHRCKV 331
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++K +
Sbjct: 332 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGPWTSVAQLEREFDRFGAIKKIDYIKGDS 390
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQP 172
A++ Y ++ A A+K + G +GG +LRVDF P
Sbjct: 391 NAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRVDFADVTP 430
>gi|2801552|gb|AAC40080.1| RNA binding protein Elavl4 [Mus musculus]
Length = 346
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 143/339 (42%), Gaps = 64/339 (18%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 24 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 78
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 79 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 138
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 139 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 198
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKR 205
V F L P+RR P H A R PI G
Sbjct: 199 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGM----------- 247
Query: 206 SHPQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPS 257
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 248 ---TSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 303
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 304 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 342
>gi|327264130|ref|XP_003216869.1| PREDICTED: ELAV-like protein 3-like [Anolis carolinensis]
Length = 386
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 149/332 (44%), Gaps = 50/332 (15%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 57 NGATDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSLGYGFV 111
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 112 NYVDSNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 171
Query: 119 LKFGNIEDFKFLKDGNTA-------FVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLR 169
++G I + L D TA F+ + + +A EA+K +NG++ G E + V F
Sbjct: 172 SQYGRIITSRILVDQVTAGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFAN 231
Query: 170 SQPSRREQWPNSH----DAR--DGPIIGRGTGFS-DN--HSAY--KRSHP------QSSV 212
+ + Q +H AR GP+ + F DN + AY KR P S
Sbjct: 232 NPSQKTGQALLTHLYQTTARRYTGPLHHQTQRFRLDNLLNMAYGVKRFSPITIDSMTSLA 291
Query: 213 GRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVE 264
G N G S ++V Y S + DE +L FG + +K + + + FV
Sbjct: 292 GVNLTGASSAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVT 350
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G D + + F +S+
Sbjct: 351 MTNYDEAAMAIASLNGYRLGDRILQVSFKTSK 382
>gi|344241813|gb|EGV97916.1| ELAV-like protein 4 [Cricetulus griseus]
gi|431896875|gb|ELK06139.1| ELAV-like protein 4, partial [Pteropus alecto]
Length = 350
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 143/339 (42%), Gaps = 64/339 (18%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 28 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 82
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 83 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 142
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 143 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 202
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKR 205
V F L P+RR P H A R PI G
Sbjct: 203 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGM----------- 251
Query: 206 SHPQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPS 257
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 252 ---TSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 307
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 308 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 346
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 55/288 (19%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 71 RKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDIKSAFAP 130
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS- 173
FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++ +P
Sbjct: 131 FGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA 190
Query: 174 -RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSV 232
+ Q N+ R ++ N+ P + ++ G S
Sbjct: 191 PKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYCGGIAS- 225
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 273
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 109 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 168
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 169 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 228
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 229 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 288
Query: 171 QP 172
P
Sbjct: 289 SP 290
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 209 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 268
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 269 VSVNGTTIEGHVVKCYWGK 287
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TTD +LK FG++G++ SR F FV F+ EDA A +A
Sbjct: 225 TNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEA 284
Query: 76 LQGSDF-----------RGNPIKIEFARPAKPSK----------HLWVGGISQTVSKEEL 114
L G F + + ++E +R + +L+V + TV+ E+L
Sbjct: 285 LNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKL 344
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +FG I K ++D + FV +S +A+ L +NG+ +GG+ L V +
Sbjct: 345 RELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQ 404
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 405 RKEERRAKL 413
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 56/284 (19%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKD 74
+L+VG+L + TD+ L + F + + V T +S + +V + +DA+ A
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 75 ALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L S G I+I ++ ++ +L+V + ++V + L E F G I K
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKV 165
Query: 130 LKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHD 183
D G + FV++ + A A++ +NG+ + +Q+ V FLR + RE +
Sbjct: 166 ATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKE--ERESAADKMK 223
Query: 184 ARDGPIIGRGTGFSDNH--SAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ + +D+ + + + SS RDG
Sbjct: 224 FTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGK-------------------- 263
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
SR + FV F + ++A RA E L G+ F+D
Sbjct: 264 ---------------SRCFGFVNFENPEDAARAVEALNGKKFDD 292
>gi|407417062|gb|EKF37920.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 746
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 44/203 (21%)
Query: 13 DDKEAPPSSNLWVGNLSA-DTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ P++ +WVGNL + T+ L+ F +FG + ++ +S+ FV+F+ VE+A+
Sbjct: 177 EDELREPTNTVWVGNLDLHEHTEELLRREFSEFGRVIRIARVPDKSYCFVHFRYVEEARN 236
Query: 72 AKDALQ------------GSDFRGNPIKIEFARPA---KPSKH----------------- 99
A +AL G F ++E R KPS+
Sbjct: 237 AVEALSARGSLGRARFNYGKMFEYTQEELEMPRDVTGHKPSRRGREEDRHDNDDRRRRSR 296
Query: 100 -----------LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAE 148
LW+G + TVS EEL E F FG I+ L N AF+ + +ED +
Sbjct: 297 REEERMEPTNVLWLGDLPPTVSNEELNENFKVFGTIKTISRLDSRNMAFIHFETIEDCTQ 356
Query: 149 ALKNINGRQIGGEQLRVDFLRSQ 171
AL + + IGG ++ +++ R+Q
Sbjct: 357 ALDLMRDQPIGGARVVLNYGRAQ 379
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ LW+G+L ++ +L E F FG + ++ SR+ AF++F+ +ED A D ++
Sbjct: 304 PTNVLWLGDLPPTVSNEELNENFKVFGTIKTISRLDSRNMAFIHFETIEDCTQALDLMRD 363
Query: 79 SDFRGNPIKIEFARPAK-------------------PSKHLWVGGISQTVSKEELEEGFL 119
G + + + R + P+ +++G ++ V++ ++E+ F
Sbjct: 364 QPIGGARVVLNYGRAQRNPTSTETGLTPDGIPVNETPTNVVYLGQLASDVTEGDVEDLFE 423
Query: 120 KFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
F + KF++ AF + +E A A +N + G LR+ F +S
Sbjct: 424 PFEGFINSKFIQSSGIAFGHFDSIEHARAARIALNNVLLRGAPLRISFGKS 474
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 8/207 (3%)
Query: 95 KPSKHLWVGGISQTVSKEEL-EEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
+P+ +WVG + EEL F +FG + + D + FV + +E+A A++ +
Sbjct: 182 EPTNTVWVGNLDLHEHTEELLRREFSEFGRVIRIARVPDKSYCFVHFRYVEEARNAVEAL 241
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
+ R G + R ++ + +E+ D RG + + S
Sbjct: 242 SARGSLG-RARFNYGKMFEYTQEELEMPRDVTGHKPSRRG---REEDRHDNDDRRRRSRR 297
Query: 214 RNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
P+ +LW+G PP+V +E L+ +FG I+ I SRN +F+ F ++++
Sbjct: 298 EEERMEPTNVLWLGDLPPTVSNEE--LNENFKVFGTIKTISRLDSRNMAFIHFETIEDCT 355
Query: 273 RAKEGLQGRLFNDPRITIMFSSSELAP 299
+A + ++ + R+ + + ++ P
Sbjct: 356 QALDLMRDQPIGGARVVLNYGRAQRNP 382
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 40/311 (12%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFRSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 273
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 274 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 333
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 334 RVLQVSFKTNK 344
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TTD +LK FG++G++ SR F FV F+ EDA A +A
Sbjct: 225 TNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEA 284
Query: 76 LQGSDF-----------RGNPIKIEFARPAKPSK----------HLWVGGISQTVSKEEL 114
L G F + + ++E +R + +L+V + TV+ E+L
Sbjct: 285 LNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKL 344
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +FG I K ++D + FV +S +A+ L +NG+ +GG+ L V +
Sbjct: 345 RELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQ 404
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 405 RKEERRAKL 413
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 56/284 (19%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKD 74
+L+VG+L + TD+ L + F + + V T +S + +V + +DA+ A
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 75 ALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L S G I+I ++ ++ +L+V + ++V + L E F G I K
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKV 165
Query: 130 LKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHD 183
D G + FV++ + A A++ +NG+ + +Q+ V FLR + RE +
Sbjct: 166 ATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKE--ERESAADKMK 223
Query: 184 ARDGPIIGRGTGFSDNH--SAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ + +D+ + + + SS RDG
Sbjct: 224 FTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGK-------------------- 263
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
SR + FV F + ++A RA E L G+ F+D
Sbjct: 264 ---------------SRCFGFVNFENPEDAARAVEALNGKKFDD 292
>gi|348554579|ref|XP_003463103.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cavia porcellus]
Length = 347
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 143/340 (42%), Gaps = 65/340 (19%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 24 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 78
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 79 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 138
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 139 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 198
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA----RDGPIIGRGTGFSDNHSAYK 204
V F L P+RR P H A R PI G
Sbjct: 199 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFSRFSPITIDGM---------- 248
Query: 205 RSHPQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYP 256
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 249 ----TSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNK 303
Query: 257 SRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 304 CKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TTD +LK FG++G++ SR F FV F+ EDA A +A
Sbjct: 220 TNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEA 279
Query: 76 LQGSDF-----------RGNPIKIEFARPAKPSK----------HLWVGGISQTVSKEEL 114
L G F + + ++E +R + +L+V + TV+ E+L
Sbjct: 280 LNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDAGNKFDGLNLYVKNLDDTVTDEKL 339
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +FG I K ++D + FV +S +A+ L +NG+ +GG+ L V +
Sbjct: 340 RELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQ 399
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 400 RKEERRAKL 408
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 68/290 (23%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKD 74
+L+VG+L + TD+ L + F + + V T +S + +V + EDA+ A
Sbjct: 41 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQ 100
Query: 75 ALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L S G I+I ++ ++ +L+V + ++V + L E F G I K
Sbjct: 101 KLNYSTLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETFSGCGTIVSCKV 160
Query: 130 LKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHD 183
D G + FV++ + A A++ +NG+ + +Q+ V FL R+E+ ++ D
Sbjct: 161 AADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFL-----RKEERESAAD 215
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
F++ ++V V D+++
Sbjct: 216 KMK---------FTN-------------------------VYVKNLSEVTTDDEL----K 237
Query: 244 ILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
FG+ I S SR + FV F + ++A RA E L G+ F+D
Sbjct: 238 TTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKFDD 287
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS---------------------FAFV 61
L+VGNLS D T+ + +LF + G + ++ + FV
Sbjct: 10 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPNTNNDPYCFV 69
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 70 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 129
Query: 115 EEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 130 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Query: 169 RSQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV 226
+P + Q N+ R ++ N+ P + ++
Sbjct: 190 TRKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYC 225
Query: 227 GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
G S + EQ++ +FG+I I+ +P + YSF+ F + D A A + G
Sbjct: 226 GGIGS-GLTEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNG 278
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 114 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 173
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI ++
Sbjct: 174 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGLT 233
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + + +F+ +S + AA A+ ++NG I G ++ + +
Sbjct: 234 EQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKE 293
Query: 171 QP 172
P
Sbjct: 294 TP 295
>gi|125991914|ref|NP_001075075.1| ELAV-like protein 4 [Bos taurus]
gi|73976985|ref|XP_859918.1| PREDICTED: ELAV-like protein 4 isoform 5 [Canis lupus familiaris]
gi|291398926|ref|XP_002715151.1| PREDICTED: ELAV-like 4-like isoform 2 [Oryctolagus cuniculus]
gi|301772324|ref|XP_002921582.1| PREDICTED: ELAV-like protein 4-like [Ailuropoda melanoleuca]
gi|426215482|ref|XP_004002001.1| PREDICTED: ELAV-like protein 4 isoform 1 [Ovis aries]
gi|124829171|gb|AAI33284.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Bos taurus]
gi|296489084|tpg|DAA31197.1| TPA: ELAV-like 4 [Bos taurus]
Length = 366
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 55/289 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQ 77
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+
Sbjct: 10 TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMN 69
Query: 78 GSDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFL 119
G G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 70 GRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDIKSAFA 129
Query: 120 KFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++ +P
Sbjct: 130 PFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPP 189
Query: 174 --RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPS 231
+ Q N+ R ++ N+ P + ++ G S
Sbjct: 190 APKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYCGGIAS 225
Query: 232 VQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 -GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 273
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 109 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 168
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 169 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 228
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 229 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 288
Query: 171 QP 172
P
Sbjct: 289 SP 290
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 209 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 268
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 269 VSVNGTTIEGHVVKCYWGK 287
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 31/188 (16%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
N++V NLS TTD LK++FG+FG + S+ F F+ F+ EDA A ++L
Sbjct: 40 NVYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESL 99
Query: 77 QGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELE 115
G F R +K +F + AK + +L+V + T+ E+L+
Sbjct: 100 NGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLK 159
Query: 116 EGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
E F +FG I K ++D + + FV +S E+A+ AL +NG+ I + L V +
Sbjct: 160 ELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQR 219
Query: 171 QPSRREQW 178
+ RR +
Sbjct: 220 KEERRAKL 227
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 37/196 (18%)
Query: 98 KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKN 152
++++V +S++ + + L++ F +FGNI ++D + F+ + EDAA+A+++
Sbjct: 39 QNVYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVES 98
Query: 153 INGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSV 212
+NG++ ++ V + + R ++ + + + + G +
Sbjct: 99 LNGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGL-------------NLY 145
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIK-----SYPSRNYSFVEFRS 267
+N D +D++ L FG I K S SR FV F +
Sbjct: 146 VKNLDD--------------TIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFST 191
Query: 268 VDEARRAKEGLQGRLF 283
+EA RA + G++
Sbjct: 192 SEEASRALSEMNGKMI 207
>gi|608543|gb|AAA96945.1| ribonucleoprotein [Xenopus laevis]
Length = 366
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 20/273 (7%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL ++ L LFGK G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D T AFV + + +A A++ +NG+ IG +R ++ R P RE S
Sbjct: 128 RDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRES-SKSGG 186
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
G G G + N + H V + + G+ P V DE ++H
Sbjct: 187 QGGGMGGMGGGGGAGNGIKNNQRHTFEEVYSQSSPTNTTVYCGGFQPHVISDE-LMHKHF 245
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + ++F++F + + A RA E
Sbjct: 246 MQFGPIQDVRVFKDKGFAFIKFVAKEAAARAIE 278
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 53/197 (26%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + +A+ A A
Sbjct: 96 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQA 155
Query: 76 LQGSDFRGNPIKIEFAR-----PAKPSKH------------------------------- 99
+ G I+ ++ P + SK
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEV 215
Query: 100 ----------LWVGGIS-QTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAE 148
++ GG +S E + + F++FG I+D + KD AF+++ E AA
Sbjct: 216 YSQSSPTNTTVYCGGFQPHVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVAKEAAAR 275
Query: 149 ALKNINGRQIGGEQLRV 165
A+++ + ++ G ++
Sbjct: 276 AIEHTHNTEVHGNHVKC 292
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S ++ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVSQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|345780791|ref|XP_859879.2| PREDICTED: ELAV-like protein 4 isoform 4 [Canis lupus familiaris]
Length = 364
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 29 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 83
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 84 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 143
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 144 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 203
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 204 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 259
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 260 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 318
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 319 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 360
>gi|149693651|ref|XP_001492503.1| PREDICTED: ELAV-like protein 4 isoform 1 [Equus caballus]
Length = 366
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|297282271|ref|XP_002808320.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein-like
[Macaca mulatta]
Length = 3672
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G NP+K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNPLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNPLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIELFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDALQ 77
L+VGNL TD + LF + GA+ K + +AF+ F A A ++
Sbjct: 40 LFVGNLDPAVTDEFIATLFNQMGAVTKAKIIFDFQGLADPYAFIEFSDHNQAAQALQSMN 99
Query: 78 GSDFRGNPIKIEFA----RPAKPSK--------HLWVGGISQTVSKEELEEGFLKFGNIE 125
G +++ +A +P S+ H++VG +S + +L+E FL FG +
Sbjct: 100 GRQLLDRELRVNWAVEPNQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLPFGEVS 159
Query: 126 DFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
+ K ++D T FV Y R EDA A++ +NG+ +G +R ++ +P +
Sbjct: 160 EAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWASRKPGEEGERR 219
Query: 180 NSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQML 239
RD RG F H +++++ + ++ P + ++VG S+ DE +
Sbjct: 220 GGGFERDRE---RGERF---HGGFEKTYDEIF---HQTSPDNTSVYVGQIGSLTEDE--I 268
Query: 240 HNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
A FG I ++ + + Y+FV+F + A RA
Sbjct: 269 RRAFDRFGAINEVRIFKLQGYAFVKFEQKEPAARA 303
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 45/193 (23%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS++ LKE F FG + + TT ++ + FV + R EDA+ A +
Sbjct: 133 HVFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQ 192
Query: 76 LQGSDFRGNPIKIEFA--------------------------------------RPAKPS 97
+ G I+ +A + + +
Sbjct: 193 MNGQWLGRRTIRTNWASRKPGEEGERRGGGFERDRERGERFHGGFEKTYDEIFHQTSPDN 252
Query: 98 KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQ 157
++VG I +++++E+ F +FG I + + K AFV++ + E AA A+ +N +
Sbjct: 253 TSVYVGQIG-SLTEDEIRRAFDRFGAINEVRIFKLQGYAFVKFEQKEPAARAIVQMNNTE 311
Query: 158 IGGEQLRVDFLRS 170
I G+ +R + +S
Sbjct: 312 IMGQMVRCSWGKS 324
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 8 FNRAYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFK 64
F + YD+ + +P +++++VG + + T D +++ F +FGA+++V + + +AFV F+
Sbjct: 237 FEKTYDEIFHQTSPDNTSVYVGQIGSLTED-EIRRAFDRFGAINEVRIFKLQGYAFVKFE 295
Query: 65 RVEDAKAAKDALQGSDFRGNPIKIEFAR 92
+ E A A + ++ G ++ + +
Sbjct: 296 QKEPAARAIVQMNNTEIMGQMVRCSWGK 323
>gi|241670456|ref|XP_002411413.1| RNA recognition motif protein, putative [Ixodes scapularis]
gi|215504059|gb|EEC13553.1| RNA recognition motif protein, putative [Ixodes scapularis]
Length = 3850
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L++GNL D T ++L++ F +FG + ++ S+ S+AF+ + + A L G
Sbjct: 351 TLFIGNLEKDITTSELRKHFDQFGEIIEIDIKKQGSASSYAFIQYSDIASVVKAMRKLDG 410
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
+ N IK+ F + + P+ +W+ GI TVS++ L F ++G + ++ A V
Sbjct: 411 ENLGANRIKLGFGK-SMPTMCVWLDGIVDTVSEKFLSRTFSRYGPVSFAAIDREKGHALV 469
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ LE A A+ + GR +GG++L+VDF
Sbjct: 470 YFDSLECAQHAVAEMRGRVLGGKKLQVDF 498
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 31/175 (17%)
Query: 27 NLSADTTDADLKE-LFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAK---------- 70
+ SADT+ LK+ LF ++ KVT + +A V FK+ ED +
Sbjct: 257 SCSADTS---LKDGLFHEYKKHGKVTVVKVIGQGTERYAVVCFKKPEDVEKALEVSKDKL 313
Query: 71 --------AAKDALQGSDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKF 121
A + L G D P++ E K ++ L++G + + ++ EL + F +F
Sbjct: 314 FFGCKIEVTAHEGLDGEDNEFRPLEAELDEYHPKATRTLFIGNLEKDITTSELRKHFDQF 373
Query: 122 GNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
G I + K G+ AF++YS + +A++ ++G +G ++++ F +S P+
Sbjct: 374 GEIIEIDIKKQGSASSYAFIQYSDIASVVKAMRKLDGENLGANRIKLGFGKSMPT 428
>gi|301606869|ref|XP_002933032.1| PREDICTED: putative RNA-binding protein 15-like isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301606871|ref|XP_002933033.1| PREDICTED: putative RNA-binding protein 15-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 836
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-----RSFAFVYFKRVEDAK 70
+A + L+VGNL ++++ +FG+FG + +V + ++ F+ F+ ++ A
Sbjct: 296 DARANRTLFVGNLDVVVKESEIYRVFGRFGTITEVDIKRAGRGQQTTYGFIKFENLDMAH 355
Query: 71 AAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
AK A+ G R + +KI + + P+ LWVGG+ V L F +FG I +
Sbjct: 356 RAKVAMSGKMLRSHALKIGYGKVV-PTNRLWVGGLGPWVPVTALAREFDRFGTIRQIDYR 414
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGE--QLRVDF 167
K N A+++Y L+ A A + G +GG+ +LRVDF
Sbjct: 415 KGENWAYIQYESLDAAQAACTQMRGFPMGGDHRRLRVDF 453
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 129/314 (41%), Gaps = 38/314 (12%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAA 72
P +NL + L T++DL+ELF FG + + T+ S + FV F+ E+A A
Sbjct: 82 PRNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAEEAARA 141
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
A+ G + +K+ ARP+ S +L++ + +T+++++L F FG I +
Sbjct: 142 IQAMNGRQYMNKRLKVSIARPSSSSITGANLYIKNLPRTITEDQLRAIFNPFGEIISARL 201
Query: 130 LKDGNT----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDA- 184
L DG+ AFV + + A A+ +N + + +RR + P+ A
Sbjct: 202 LYDGDVPKGIAFVRFDKRACAERAVAELNNTVPANCSQPIAVKFADTNRRSRAPSGSSAG 261
Query: 185 -RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDG---------PPSKILWVGY------ 228
G ++ + +++ PQ ++ + G PPS GY
Sbjct: 262 MHQGSMMAYPSMPMPYGGGFQQPQPQPTMAPLQPGFVPMSPDMLPPSARTPYGYCLFVFN 321
Query: 229 -PPSVQMDEQMLHNAMILFG-----EIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRL 282
PP MDE FG I R +R Y FV R EA A + L
Sbjct: 322 LPPF--MDEDGFARLFANFGGVVSASISRKSLSQARRYGFVTMRDFGEAATAIQNLNDYD 379
Query: 283 FNDPRITIMFSSSE 296
R+++ F S+
Sbjct: 380 VFGYRLSVSFKSNR 393
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 51/303 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP-- 186
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQM 234
P + +Y QSS P + ++ G S +
Sbjct: 187 -------------PAPKSTYELNTKQLSYDEVVSQSS-------PSNCTVYCGGVTS-GL 225
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
EQ++ FG+I I+ +P + YSF+ F S + A A + G + +
Sbjct: 226 TEQLMRQTFSPFGQILEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
Query: 295 SEL 297
L
Sbjct: 286 ETL 288
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +F+ ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQILEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|149693653|ref|XP_001492549.1| PREDICTED: ELAV-like protein 4 isoform 3 [Equus caballus]
Length = 366
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 61/294 (20%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS---------------------FAFV 61
L+VGNLS D T+ + +LF + G + ++ + FV
Sbjct: 48 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMPNANNDPYCFV 107
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 108 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 167
Query: 115 EEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 168 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 227
Query: 169 RSQP--SRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV 226
+P + Q N+ R ++ + + S N + Y +G
Sbjct: 228 TRKPPAPKSTQENNTKQLRFEDVVNQSS--SKNCTVYC-----GGIGAG----------- 269
Query: 227 GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ EQ++ +FG+I I+ +P + YSF+ F + D A A + G
Sbjct: 270 -------LSEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNG 316
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 152 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 211
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI +S
Sbjct: 212 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSSKNCTVYCGGIGAGLS 271
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + + +F+ +S + AA A+ ++NG I G ++ + +
Sbjct: 272 EQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKE 331
Query: 171 QP 172
P
Sbjct: 332 TP 333
>gi|432868074|ref|XP_004071398.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oryzias latipes]
Length = 359
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 140/337 (41%), Gaps = 50/337 (14%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR 56
P N + DD + +NL V L + T + K LFG G + DK+T S
Sbjct: 25 PVISTNGSTDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSL 79
Query: 57 SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEE 113
+ FV + DA A + L G + IK+ +ARP+ S +L+V G+ +T+S+++
Sbjct: 80 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKD 139
Query: 114 LEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRV 165
+E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 140 MEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITV 199
Query: 166 DF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSH 207
F L +RR P H R ++ G S
Sbjct: 200 KFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKSRFSPITIDS 259
Query: 208 PQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRN 259
S G N GP ++V Y S + DE +L FG + +K + +
Sbjct: 260 MTSLAGVNLTGPTGAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG 318
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 319 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 55/304 (18%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 60
Query: 80 DFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLKF 121
G +K+ +A K H++VG +S ++ E+++ F F
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 180
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQ 233
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 181 K------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-G 215
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 216 LTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWG 275
Query: 294 SSEL 297
L
Sbjct: 276 KETL 279
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 98 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 157
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 217
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 218 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 272
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
++ L+ GNL + A L + + + V T SR FAFV +ED +
Sbjct: 146 TTKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVI 205
Query: 74 DALQGSDFRGNPIKIEFARPAKP-------SKH-LWVGGISQTVSKEELEEGFLKFGNIE 125
L GS + G +++ FA KP ++H L+VG +S TV+ E L E F K GN+
Sbjct: 206 KNLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVV 265
Query: 126 DFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ L DG T FV YS E+ EAL ++NG ++ G ++RV+
Sbjct: 266 GARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNL 313
>gi|291398930|ref|XP_002715153.1| PREDICTED: ELAV-like 4-like isoform 4 [Oryctolagus cuniculus]
Length = 402
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 67 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 121
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 122 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 181
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 182 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 241
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 242 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 297
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 298 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 356
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 357 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 398
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TTD +LK FG+FG + S+ F FV F+ +DA A +A
Sbjct: 210 NNVFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAVEA 269
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G +F R N +K F + K + +L+V + ++ E+L
Sbjct: 270 LNGKNFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLDDSIGDEKL 329
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG I K ++D N + FV +S E+A+ AL +NG+ + + L V +
Sbjct: 330 KELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVTLAQ 389
Query: 170 SQPSRR 175
+ RR
Sbjct: 390 RKEDRR 395
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 119/289 (41%), Gaps = 64/289 (22%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TDA L +LF + G + V T+ S + +V F +DA A
Sbjct: 30 TTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARAL 89
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
D L + PI+I ++ PS ++++ + + + + L + F FGNI
Sbjct: 90 DVLNFTPLNNRPIRIMYSH-RDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSC 148
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D + FV++ E A +A++ +NG + +Q+ V FLR Q
Sbjct: 149 KVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQ---------- 198
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ SA ++ + +N S DE L N
Sbjct: 199 ----------------ERESAADKAKFNNVFVKN------------LSESTTDDE--LKN 228
Query: 242 AMILFGEIE-----RIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
FG I R S+ + FV F + D+A RA E L G+ F+D
Sbjct: 229 TFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAVEALNGKNFDD 277
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKDAL 76
N+++ NL L + F FG + KV T SS + + FV F E A+ A + L
Sbjct: 120 NIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKL 179
Query: 77 QGSDFRGNPIKI---------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
G + + E A +++V +S++ + +EL+ F +FG I
Sbjct: 180 NGMLLNDKQVYVGPFLRKQERESAADKAKFNNVFVKNLSESTTDDELKNTFGEFGTITSA 239
Query: 128 KFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
++DG+ FV + +DAA A++ +NG+ ++ V + + R +
Sbjct: 240 VVMRDGDGKSKCFGFVNFENADDAARAVEALNGKNFDDKEWYVGKAQKKSERENEL 295
>gi|73977009|ref|XP_532585.2| PREDICTED: ELAV-like protein 4 isoform 1 [Canis lupus familiaris]
gi|291398932|ref|XP_002715154.1| PREDICTED: ELAV-like 4-like isoform 5 [Oryctolagus cuniculus]
gi|426215486|ref|XP_004002003.1| PREDICTED: ELAV-like protein 4 isoform 3 [Ovis aries]
Length = 366
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|71051886|gb|AAH99348.1| ElrD protein, partial [Xenopus laevis]
Length = 360
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 25 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 79
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 80 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 139
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 140 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPI 199
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 200 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 255
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 256 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 314
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 315 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 53 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 111
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 112 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 171
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 172 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 231
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G P
Sbjct: 232 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGW 291
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 292 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 350
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 351 SLNGYRLGDRVLQVSFKTNK 370
>gi|40807107|gb|AAH65343.1| Elavl3 protein [Danio rerio]
Length = 359
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 152/338 (44%), Gaps = 52/338 (15%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR 56
P N A DD + +NL V L + T + K LFG G + DK+T S
Sbjct: 25 PVISTNGATDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSL 79
Query: 57 SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEE 113
+ FV + DA A + L G + IK+ +ARP+ S +L+V G+ +T+S+++
Sbjct: 80 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKD 139
Query: 114 LEEGFLKFGNIEDFKFLKDGNTA-------FVEYSRLEDAAEALKNINGRQIGG--EQLR 164
+E+ F ++G I + L D TA F+ + + +A EA+K +NG++ G E +
Sbjct: 140 MEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 199
Query: 165 VDFLRSQPSRR-------EQWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHP---- 208
V F + PS++ + + + GP+ + F DN +++Y KR P
Sbjct: 200 VKF-ANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKRFSPITID 258
Query: 209 --QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSR 258
S G N GP ++V Y S + DE +L FG + +K + +
Sbjct: 259 SMTSLAGVNLTGPTGAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCK 317
Query: 259 NYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 318 GFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 139/326 (42%), Gaps = 46/326 (14%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVE 67
K +NL V L + T +LK LFG G + DK+T S + FV + +
Sbjct: 33 KTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPK 91
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNI 124
DA+ A + L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I
Sbjct: 92 DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI 151
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------- 167
+ L D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 152 ITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN 211
Query: 168 ------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDG 218
L P+RR P + A R ++ G S S G N G
Sbjct: 212 QAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPG 271
Query: 219 PPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDE 270
P ++V Y + DE +L FG + +K + + + FV + DE
Sbjct: 272 HPGTGWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDE 330
Query: 271 ARRAKEGLQGRLFNDPRITIMFSSSE 296
A A L G D + + F +++
Sbjct: 331 AAMAIASLNGYRLGDRVLQVSFKTNK 356
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 217
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G P
Sbjct: 218 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGW 277
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 278 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 336
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 337 SLNGYRLGDRVLQVSFKTNK 356
>gi|348554577|ref|XP_003463102.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cavia porcellus]
gi|354468154|ref|XP_003496532.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cricetulus griseus]
Length = 383
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 48 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 102
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 103 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 162
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 163 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 223 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 278
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 279 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 337
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 338 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 42/285 (14%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVED 68
+D+ P + L+VGNLS D T+ + +LF + G + +T ++S + FV F D
Sbjct: 2 EDESHPKT--LYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRD 59
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKF 121
A AA A+ G G +K+ +A K H++VG +S ++ +++ F F
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPF 119
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++ +P
Sbjct: 120 GKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP--- 176
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
P +D ++ K+ V N+ P + ++ G S +
Sbjct: 177 ---PAPKSVQD--------------NSAKQLRFDEVV--NQSSPQNCTVYCGGIQS-GLT 216
Query: 236 EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
E ++ FG+I I+ +P + YSF+ F S + A A + G
Sbjct: 217 EHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNG 261
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D++ F FG + +TT S+ + FV F DA+ A
Sbjct: 97 HVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVH 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI ++
Sbjct: 157 MGGQWLGGRQIRTNWATRKPPAPKSVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLT 216
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +F+ +S E AA A+ ++NG I G ++ + +
Sbjct: 217 EHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 276
Query: 171 QP 172
P
Sbjct: 277 SP 278
>gi|194207476|ref|XP_001492529.2| PREDICTED: ELAV-like protein 4 isoform 2 [Equus caballus]
Length = 383
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 48 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 102
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 103 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 162
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 163 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 223 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 278
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 279 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 337
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 338 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 32/193 (16%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAA 72
P +N++V NLS TT+ +LKE+FGKFG + V SR F FV F+ +DA A
Sbjct: 215 PKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARA 274
Query: 73 KDALQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSK 111
+ L G F R +K +F + K + +L++ + ++
Sbjct: 275 VEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDD 334
Query: 112 EE-LEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+E L+E F FG I K ++D N + FV + EDA+ AL +NG+ IG + L V
Sbjct: 335 DEKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYV 394
Query: 166 DFLRSQPSRREQW 178
+ + RR +
Sbjct: 395 ALAQRKEERRARL 407
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 52/283 (18%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L DA L ++F + G++ V T S +A+V F DA A
Sbjct: 38 ATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARAL 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L + G PI+I ++ S+ ++++ + +++ + L + F FGNI K
Sbjct: 98 EMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCK 157
Query: 129 FLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
+ FV++ E A A+ +NG + +++ V F+R Q RE
Sbjct: 158 VATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQ--ERENV---- 211
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+G ++ Y ++ +S+ N K ++ + P + +
Sbjct: 212 -----------SGNPKFNNVYVKNLSESTTEDNL-----KEIFGKFGP--------ITSV 247
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+++ R SR + FV F + D+A RA E L G+ F+D
Sbjct: 248 VVM-----REGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDD 285
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TTD +LK+ FG+FG + S+ F FV F+ +DA A +A
Sbjct: 213 NNVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEA 272
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G R + +KI+F + K + +L+V + +++ E+L
Sbjct: 273 LNGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGANLYVKNLDDSIADEKL 332
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +G I K ++D N + FV +S E+A+ AL +NG+ + + L V +
Sbjct: 333 KELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQ 392
Query: 170 SQPSRR 175
+ RR
Sbjct: 393 RKEDRR 398
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 54/284 (19%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TD+ L +LF + G + V TT S + +V + +DA A
Sbjct: 33 TTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARAL 92
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
D L + PI+I ++ PS ++++ + + + + L + F FGNI
Sbjct: 93 DVLNFTPLNNRPIRIMYSH-RDPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILSC 151
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K DG+ FV++ E A +A++ +NG + +Q+ V FLR Q E+
Sbjct: 152 KVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQ----ERESTG 207
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
A+ + + S K++ + + +
Sbjct: 208 DRAKFNNVFVKNLSESTTDDELKKTFGEFGT--------------------------ITS 241
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
A+++ R S+ + FV F S D+A RA E L G+ +D
Sbjct: 242 AVVM-----RDGDGKSKCFGFVNFESTDDAARAVEALNGKKIDD 280
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
N+++ NL L + F FG + S+ + FV F E A+ A + L
Sbjct: 123 NIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKL 182
Query: 77 QGSDFRGNPIKI-EFARPAKPS--------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
G + + F R + +++V +S++ + +EL++ F +FG I
Sbjct: 183 NGMLLNDKQVYVGPFLRKQERESTGDRAKFNNVFVKNLSESTTDDELKKTFGEFGTITSA 242
Query: 128 KFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
++DG+ FV + +DAA A++ +NG++I ++ V + + R +
Sbjct: 243 VVMRDGDGKSKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKKSEREHEL 298
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 217
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G P
Sbjct: 218 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGW 277
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 278 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 336
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 337 SLNGYRLGDRVLQVSFKTNK 356
>gi|193690854|ref|XP_001946792.1| PREDICTED: hypothetical protein LOC100158669 [Acyrthosiphon pisum]
Length = 756
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL +D +L+ +FG++G ++ + + ++AFV ++ ++ A AK
Sbjct: 312 TRTLFAGNLEISISDEELRRIFGRYGVVEDIDVKRPLPGTGNAYAFVRYQNLDMAHRAKV 371
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + + P++ +WVGG+ S +LE F +FG I+ +++K
Sbjct: 372 ELSGQYLGKFQCKIGYGK-STPTQRIWVGGLGPWTSLAQLEREFDRFGVIKKIEYVKGDI 430
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A++++ ++ A A+K + G +GG +LR DF
Sbjct: 431 CAYIQFESIDAATAAVKEMRGVALGGPEHKLRTDF 465
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK----DGNT-AFVEYSRLEDAAEALK 151
++ L+ G + ++S EEL F ++G +ED + GN AFV Y L+ A A
Sbjct: 312 TRTLFAGNLEISISDEELRRIFGRYGVVEDIDVKRPLPGTGNAYAFVRYQNLDMAHRAKV 371
Query: 152 NINGRQIGGEQLRVDFLRSQPSRR 175
++G+ +G Q ++ + +S P++R
Sbjct: 372 ELSGQYLGKFQCKIGYGKSTPTQR 395
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ +WVG L T+ A L+ F +FG + K+ A++ F+ ++ A AA ++G
Sbjct: 392 PTQRIWVGGLGPWTSLAQLEREFDRFGVIKKIEYVKGDICAYIQFESIDAATAAVKEMRG 451
Query: 79 SDFRG--NPIKIEFA 91
G + ++ +FA
Sbjct: 452 VALGGPEHKLRTDFA 466
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
++ L+ GNL + A L + + + V T SR FAFV +ED +
Sbjct: 144 TTKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVI 203
Query: 74 DALQGSDFRGNPIKIEFARPAKP-------SKH-LWVGGISQTVSKEELEEGFLKFGNIE 125
L GS + G +++ FA KP ++H L+VG +S TV+ E L E F K GN+
Sbjct: 204 KNLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVV 263
Query: 126 DFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ L DG T FV YS E+ EAL ++NG ++ G ++RV+
Sbjct: 264 GARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNL 311
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S ++ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVSQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|328700850|ref|XP_001952161.2| PREDICTED: putative RNA-binding protein 15-like [Acyrthosiphon
pisum]
Length = 750
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+VGNL +D +L LFG++G ++ + + ++AFV ++ ++ A AK
Sbjct: 311 TRTLFVGNLEFSISDEELHCLFGRYGVVEDIDIKRPLPGTGNAYAFVRYQNLDMAHRAKV 370
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + + PS+ +WVGG+ S +LE+ F +FG I+ +F+K
Sbjct: 371 ELSGQYLGKFQCKIGYGK-SIPSQRIWVGGLGPWTSLAQLEQEFDRFGVIKKIEFVKSDI 429
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
A++++ ++ A A+ + G +GG +LR D+ +S
Sbjct: 430 CAYIQFECIDAATAAVNEMRGVSLGGPEHKLRTDYAKS 467
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK----DGNT-AFVEYSRLEDAAEALK 151
++ L+VG + ++S EEL F ++G +ED + GN AFV Y L+ A A
Sbjct: 311 TRTLFVGNLEFSISDEELHCLFGRYGVVEDIDIKRPLPGTGNAYAFVRYQNLDMAHRAKV 370
Query: 152 NINGRQIGGEQLRVDFLRSQPSRR 175
++G+ +G Q ++ + +S PS+R
Sbjct: 371 ELSGQYLGKFQCKIGYGKSIPSQR 394
>gi|326925350|ref|XP_003208879.1| PREDICTED: ELAV-like protein 4-like [Meleagris gallopavo]
Length = 379
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 44 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 98
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 99 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 158
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 159 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 218
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 219 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 274
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 275 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 333
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 334 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 375
>gi|224058156|ref|XP_002196701.1| PREDICTED: ELAV-like protein 4 [Taeniopygia guttata]
Length = 371
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 211 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 266
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 267 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 325
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 326 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 217
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G P
Sbjct: 218 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGW 277
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 278 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 336
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 337 SLNGYRLGDRVLQVSFKTNK 356
>gi|157131668|ref|XP_001655916.1| RNA recognition motif protein split ends [Aedes aegypti]
gi|108871456|gb|EAT35681.1| AAEL012171-PA [Aedes aegypti]
Length = 663
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + +D +L+ +FGK+G ++ + + +FAFV ++ ++ A AK
Sbjct: 205 TRTLFAGNLEINISDDELRRIFGKYGIVEDIDIKRPPPGTGNAFAFVRYQTLDMAHRAKV 264
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++ K
Sbjct: 265 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGAWTSVTQLEREFDRFGAIKKIEYNKGDT 323
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQWPNSHDARDGPIIGR 192
AF+ Y ++ A A+K + G +G ++R+DF + + P R
Sbjct: 324 QAFILYDSIDAATAAVKEMRGFPLGAPDRRIRIDF-------------ADNGTTPPFPKR 370
Query: 193 GTGFSDNHSAYKR----SHPQSSVGRN 215
G GF D Y+R +P+SS N
Sbjct: 371 GGGF-DEGGEYRRGPDYEYPESSYEEN 396
>gi|158254301|gb|AAI54223.1| Zgc:85696 [Danio rerio]
Length = 556
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
L+VGNL+ DTT +L +F +G + V+ R FAFV+ + A+ A L G +F
Sbjct: 8 KLFVGNLALDTTQEELSAIFESYGQV--VSCSVLRQFAFVHLQGEGAAERAIRELNGREF 65
Query: 82 RGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+G + +E +R +P S ++VG +S + E+L+E F FG + + +K AFV
Sbjct: 66 KGRNLVVEESR-GRPLHSTKVFVGNLSSMCTTEDLQELFQTFGKVLECDKVK--GYAFVH 122
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
EDA +A++ ++G G L V+ + QPS++
Sbjct: 123 MENKEDALQAIEALHGTSFKGRPLSVELSKVQPSKQ 158
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
S+ ++VGNLS+ T DL+ELF FG + DKV + +AFV+ + EDA A +AL
Sbjct: 82 STKVFVGNLSSMCTTEDLQELFQTFGKVLECDKV-----KGYAFVHMENKEDALQAIEAL 136
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGI 105
G+ F+G P+ +E ++ +PSK G I
Sbjct: 137 HGTSFKGRPLSVELSK-VQPSKQTPTGKI 164
>gi|338721769|ref|XP_003364429.1| PREDICTED: ELAV-like protein 4 [Equus caballus]
Length = 371
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 266
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 267 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 325
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 326 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|254281262|ref|NP_001156871.1| ELAV-like protein 4 isoform d [Mus musculus]
gi|73977013|ref|XP_860413.1| PREDICTED: ELAV-like protein 4 isoform 17 [Canis lupus familiaris]
gi|291398928|ref|XP_002715152.1| PREDICTED: ELAV-like 4-like isoform 3 [Oryctolagus cuniculus]
gi|354468152|ref|XP_003496531.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cricetulus griseus]
gi|426215484|ref|XP_004002002.1| PREDICTED: ELAV-like protein 4 isoform 2 [Ovis aries]
Length = 371
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 266
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 267 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 325
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 326 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 25/274 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL + ++ L LF G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D +T AFV + + +A A++ +NG+ IG +R ++ R P RE P+
Sbjct: 128 RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE--PSKGG 185
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
+ G + G S + + + + N+ P + ++ G +PP+V D+ ++H
Sbjct: 186 GQGGGMGGGPGNGSGVKGSQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 241
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + +SF++F + + A A E
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
>gi|348520155|ref|XP_003447594.1| PREDICTED: hypothetical protein LOC100696008 [Oreochromis
niloticus]
Length = 575
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+ L+VGNL+ DTT +L +F +G + V+ R FAFV+ + A+ A L G
Sbjct: 6 TVKLFVGNLALDTTQEELSAIFEPYGQV--VSCSVLRQFAFVHLQGEGAAERAIRELNGR 63
Query: 80 DFRGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
+FRG + +E +R +P S ++VG +S + E+L++ F FG + + +K AF
Sbjct: 64 EFRGRNLVVEESR-GRPLHSTKVFVGNLSGMCTTEDLQQLFQTFGKVLECDKVK--GYAF 120
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
V EDA +A++ ++G G L V+ + QPS++
Sbjct: 121 VHMENKEDALQAIEALHGTSFKGRPLSVELSKVQPSKQ 158
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
S+ ++VGNLS T DL++LF FG + DKV + +AFV+ + EDA A +AL
Sbjct: 82 STKVFVGNLSGMCTTEDLQQLFQTFGKVLECDKV-----KGYAFVHMENKEDALQAIEAL 136
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGI 105
G+ F+G P+ +E ++ +PSK G I
Sbjct: 137 HGTSFKGRPLSVELSK-VQPSKQAPTGKI 164
>gi|327263685|ref|XP_003216648.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Anolis carolinensis]
Length = 390
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 137/320 (42%), Gaps = 45/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAI 127
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 128 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 187
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 188 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 247
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G
Sbjct: 248 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHAGTGW 307
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 308 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 366
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 367 SLNGYRLGDRVLQVSFKTNK 386
>gi|47086421|ref|NP_997973.1| RNA binding motif protein 14 [Danio rerio]
gi|46249892|gb|AAH68361.1| Zgc:85696 [Danio rerio]
gi|68085002|gb|AAH56604.2| Zgc:85696 [Danio rerio]
Length = 556
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
L+VGNL+ DTT +L +F +G + V+ R FAFV+ + A+ A L G +F
Sbjct: 8 KLFVGNLALDTTQEELSAIFESYGQV--VSCSVLRQFAFVHLQGEGAAERAIRELNGREF 65
Query: 82 RGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+G + +E +R +P S ++VG +S + E+L+E F FG + + +K AFV
Sbjct: 66 KGRNLVVEESR-GRPLHSTKVFVGNLSSMCTTEDLQELFQTFGKVLECDKVK--GYAFVH 122
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
EDA +A++ ++G G L V+ + QPS++
Sbjct: 123 MENKEDALQAIEALHGTSFKGRPLSVELSKVQPSKQ 158
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
S+ ++VGNLS+ T DL+ELF FG + DKV + +AFV+ + EDA A +AL
Sbjct: 82 STKVFVGNLSSMCTTEDLQELFQTFGKVLECDKV-----KGYAFVHMENKEDALQAIEAL 136
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGI 105
G+ F+G P+ +E ++ +PSK G I
Sbjct: 137 HGTSFKGRPLSVELSK-VQPSKQTPTGKI 164
>gi|49119672|gb|AAH72716.1| Zgc:91918 [Danio rerio]
Length = 360
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 134/321 (41%), Gaps = 48/321 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYMEPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F +FG I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + R +A EA+K +NG++ G E + V F
Sbjct: 158 VDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNPSQKSSQALLSH 217
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRN---RDGPPS 221
L P+RR P + A R ++ G S S G N G
Sbjct: 218 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGVTSLAGINLPAHAGTGW 277
Query: 222 KILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAK 275
I P DE +L FG + +K + + + FV + DEA A
Sbjct: 278 CIFVYNLAPDA--DENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAI 335
Query: 276 EGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 336 ASLNGYRLGDRVLQVSFKTNK 356
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 25/274 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL + ++ L LF G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D +T AFV + + +A A++ +NG+ IG +R ++ R P RE P+
Sbjct: 128 RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE--PSKGG 185
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
+ G + G S + + + + N+ P + ++ G +PP+V D+ ++H
Sbjct: 186 GQGGGMGGGPGNGSGVKGSQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 241
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + +SF++F + + A A E
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 55/288 (19%)
Query: 23 LWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 10 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 69
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 70 RKILGKEVKVNWATTPSSQKKDTSSKYFCCILRKSYHFHVFVGDLSPEITTEDIKSAFAP 129
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS- 173
FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++ +P
Sbjct: 130 FGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA 189
Query: 174 -RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSV 232
+ Q N+ R ++ N+ P + ++ G S
Sbjct: 190 PKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYCGGIAS- 224
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 225 GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 272
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 108 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 167
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 168 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 227
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 228 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 287
Query: 171 QP 172
P
Sbjct: 288 SP 289
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 208 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 267
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 268 VSVNGTTIEGHVVKCYWGK 286
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 25/274 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL + ++ L LF G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D +T AFV + + +A A++ +NG+ IG +R ++ R P RE P+
Sbjct: 128 RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE--PSKGG 185
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
+ G + G S + + + + N+ P + ++ G +PP+V D+ ++H
Sbjct: 186 GQGGGMGGGPGNGSGVKGSQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 241
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + +SF++F + + A A E
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 55/304 (18%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 60
Query: 80 DFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLKF 121
G +K+ +A K H++VG +S ++ E+++ F F
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 180
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQ 233
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 181 K------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-G 215
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 216 LTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWG 275
Query: 294 SSEL 297
L
Sbjct: 276 KETL 279
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 98 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 157
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 217
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 218 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 272
>gi|47220048|emb|CAG12196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 144/343 (41%), Gaps = 56/343 (16%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR 56
P N + DD + +NL V L + T + K LFG G + DK+T S
Sbjct: 23 PVISTNGSTDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSL 77
Query: 57 SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEE 113
+ FV + DA A + L G + IK+ +ARP+ S +L+V G+ +T+S+++
Sbjct: 78 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKD 137
Query: 114 LEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRV 165
+E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 138 MEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITV 197
Query: 166 DF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSH 207
F L +RR P H R ++ G + + + R
Sbjct: 198 KFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKSSPTLFPRFS 257
Query: 208 P------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------ 253
P S G N GP ++V Y S + DE +L FG + +K
Sbjct: 258 PITIDSMTSLAGVNLTGPTGAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFT 316
Query: 254 SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + + FV + DEA A L G D + + F +S+
Sbjct: 317 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 359
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
++VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 8 MYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 67
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 68 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAAFAP 127
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 128 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 187
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 188 PK------------------------STYESNTKQLSYDDVVNQSSPSNCTVYCGGVTS- 222
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 223 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 282
Query: 293 SSSEL 297
L
Sbjct: 283 GKETL 287
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 106 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 165
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 166 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLT 225
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 226 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 280
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 11 AYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
+YDD + +P + ++ G +++ T+ +++ F FG + ++ + + ++FV F E
Sbjct: 200 SYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 259
Query: 68 DAKAAKDALQGSDFRGNPIKIEFAR 92
A A ++ G+ G+ +K + +
Sbjct: 260 SAAHAIVSVNGTTIEGHVVKCYWGK 284
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMETAGNDPYCFVEFHDDRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKKMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S ++ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVSQSSPNNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV +S E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|312370926|gb|EFR19225.1| hypothetical protein AND_22865 [Anopheles darlingi]
Length = 759
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + +D +L+ +FGK+G ++ + + +FAFV ++ ++ A AK
Sbjct: 248 TRTLFAGNLEINISDEELRRIFGKYGLVEDIDIKRPPPGTGNAFAFVRYQTLDMAHRAKV 307
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++ K
Sbjct: 308 ELSGQYIGKFQCKIGYGK-ATPTTRVWVGGLGAWTSVTQLEREFDRFGAIKKIEYTKGDT 366
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A++ Y ++ A A+K + G +G ++R+DF
Sbjct: 367 QAYILYDSIDAATAAVKEMRGFPLGAPDRRIRIDF 401
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 126
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 127 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 186
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 187 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 246
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G P
Sbjct: 247 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGW 306
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 307 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 365
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 366 SLNGYRLGDRVLQVSFKTNK 385
>gi|432920249|ref|XP_004079910.1| PREDICTED: uncharacterized protein LOC101158309 [Oryzias latipes]
Length = 564
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
L+VGNL+ DTT +L +F +G + V+ R FAFV+ + A+ A L G +F
Sbjct: 8 KLFVGNLALDTTQEELSAIFEPYGQV--VSCSVLRQFAFVHLQGEGAAERAIRELNGREF 65
Query: 82 RGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
RG + +E +R +P S ++VG +S + E+L++ F FG + + +K AFV
Sbjct: 66 RGRNLVVEESR-GRPLHSTKVFVGNLSGMCTTEDLQQLFQTFGKVLECDKVK--GYAFVH 122
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
EDA +A++ ++G G L V+ + QPS++
Sbjct: 123 MENKEDALQAIEALHGTSFKGRPLSVELSKVQPSKQ 158
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
S+ ++VGNLS T DL++LF FG + DKV + +AFV+ + EDA A +AL
Sbjct: 82 STKVFVGNLSGMCTTEDLQQLFQTFGKVLECDKV-----KGYAFVHMENKEDALQAIEAL 136
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGI 105
G+ F+G P+ +E ++ +PSK G I
Sbjct: 137 HGTSFKGRPLSVELSK-VQPSKQAPTGKI 164
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 55/288 (19%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 189 PK------------------------STYESNAKQLSYDDVVNQSSPSNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ EQ++ FG+I I+ +P + YSFV F S + A A + G
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 271
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++ + +
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Query: 171 QP 172
P
Sbjct: 287 TP 288
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 11 AYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
+YDD + +P + ++ G +++ T+ +++ F FG + ++ + + ++FV F E
Sbjct: 201 SYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 260
Query: 68 DAKAAKDALQGSDFRGNPIKIEFAR 92
A A ++ G+ G+ +K + +
Sbjct: 261 SAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|410967448|ref|XP_003990231.1| PREDICTED: ELAV-like protein 4 [Felis catus]
Length = 494
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 148/347 (42%), Gaps = 58/347 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 48 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 102
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 103 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 162
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 163 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 223 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 278
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 279 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 337
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK 301
+ + FV + DEA A L G D + + F +++ A GK
Sbjct: 338 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK-AEGK 383
>gi|119627248|gb|EAX06843.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Homo sapiens]
Length = 356
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 142/339 (41%), Gaps = 64/339 (18%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 34 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 88
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 89 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 148
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 149 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 208
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKR 205
V F L P+RR P H A R PI G
Sbjct: 209 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGM----------- 257
Query: 206 SHPQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPS 257
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 258 ---TSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 313
Query: 258 RNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 314 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 352
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 125
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 126 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 185
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 186 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 245
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G P
Sbjct: 246 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGW 305
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 306 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 364
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 365 SLNGYRLGDRVLQVSFKTNK 384
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 134/321 (41%), Gaps = 48/321 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYMEPKDAEKAI 126
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F +FG I + L
Sbjct: 127 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSRIL 186
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + R +A EA+K +NG++ G E + V F
Sbjct: 187 VDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNPSQKSSQALLSH 246
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRN---RDGPPS 221
L P+RR P + A R ++ G S S G N G
Sbjct: 247 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGVTSLAGINLPAHAGTGW 306
Query: 222 KILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAK 275
I P DE +L FG + +K + + + FV + DEA A
Sbjct: 307 CIFVYNLAPDA--DENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAI 364
Query: 276 EGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 365 ASLNGYRLGDRVLQVSFKTNK 385
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 123/305 (40%), Gaps = 55/305 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 188
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSV 232
+ S Y+ + Q S ++ P + ++ G S
Sbjct: 189 PK------------------------STYESNTKQLSYDEVVSQSSPGNCTVYCGGVTS- 223
Query: 233 QMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+ EQ++ FG+I I+ +P + YSF+ F S + A A + G + +
Sbjct: 224 GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYW 283
Query: 293 SSSEL 297
L
Sbjct: 284 GKETL 288
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +F+ +S E AA A+ ++NG I G ++
Sbjct: 227 EQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKC 281
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 55/289 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQ 77
L+VGNLS D T+ + ++F + G T + + FV F A A+ A+
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAIN 67
Query: 78 GSDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFL 119
G G +K+ +A K H++VG +S ++ ++++ F
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFA 127
Query: 120 KFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
FG I D + +KD T FV + DA A+ + G+ +GG Q+R ++ +P
Sbjct: 128 PFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPP 187
Query: 174 RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPS 231
+ S Y+ + Q + N+ P + ++ G S
Sbjct: 188 APK------------------------STYESNAKQLTYEEVVNQSSPSNCTVYCGGVTS 223
Query: 232 VQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ EQ++ FG+I ++ +P + YSFV F S + A A + G
Sbjct: 224 -GLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + +TT S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 227 EQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Query: 171 QP 172
P
Sbjct: 287 TP 288
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 55/289 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQ 77
L+VGNLS D T+ + ++F + G T + + FV F A A+ A+
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMN 67
Query: 78 GSDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFL 119
G G +K+ +A K H++VG +S ++ ++++ F
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFA 127
Query: 120 KFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
FG I D + +KD T FV + DA A+ + G+ +GG Q+R ++ +P
Sbjct: 128 PFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPP 187
Query: 174 RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPS 231
+ S Y+ + Q + N+ P + ++ G S
Sbjct: 188 APK------------------------STYESNTKQLTYEEVVNQSSPSNCTVYCGGVTS 223
Query: 232 VQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ EQ++ FG+I ++ +P + YSFV F S + A A + G
Sbjct: 224 -GLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + +TT S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 227 EQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Query: 171 QP 172
P
Sbjct: 287 TP 288
>gi|334321532|ref|XP_003340124.1| PREDICTED: ELAV-like protein 4 isoform 2 [Monodelphis domestica]
Length = 347
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 142/340 (41%), Gaps = 65/340 (19%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 24 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 78
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 79 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 138
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 139 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 198
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA----RDGPIIGRGTGFSDNHSAYK 204
V F L P+RR P H A R PI G
Sbjct: 199 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRFSRFSPITIDGM---------- 248
Query: 205 RSHPQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYP 256
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 249 ----TSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNK 303
Query: 257 SRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 304 CKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 343
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 55/289 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQ 77
L+VGNLS D T+ + ++F + G T + + FV F A A+ A+
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAMN 67
Query: 78 GSDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFL 119
G G +K+ +A K H++VG +S ++ ++++ F
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAFA 127
Query: 120 KFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
FG I D + +KD T FV + DA A+ + G+ +GG Q+R ++ +P
Sbjct: 128 PFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKPP 187
Query: 174 RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPS 231
+ S Y+ + Q + N+ P + ++ G S
Sbjct: 188 APK------------------------STYESNTKQLTYEEVVNQSSPSNCTVYCGGVTS 223
Query: 232 VQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ EQ++ FG+I ++ +P + YSFV F S + A A + G
Sbjct: 224 -GLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + +TT S+ + FV F DA+ A
Sbjct: 107 HVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQ 166
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLT 226
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
++ + + F FG I + + D +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 227 EQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Query: 171 QP 172
P
Sbjct: 287 TP 288
>gi|112983834|ref|NP_001037293.1| RNA-binding protein lark [Bombyx mori]
gi|57236850|gb|AAW48898.1| lark-PA [Bombyx mori]
Length = 343
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
+++GNLS TT+ADL+ LF K+G + V R++ FV+ + + + A L G
Sbjct: 8 KIFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFVHMENEQVGREAIQNLNGELV 65
Query: 82 RGNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
G IKIE A+ P+ P+ ++VG ++ E+ E F KFG + + ++ N F
Sbjct: 66 HGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR--NYGF 123
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
V D +A+K +NG + G+ ++V SR Q P D GRG +S
Sbjct: 124 VHLDATGDVNDAIKELNGMMVDGQPMKVQL---STSRVRQRPGMGDPEQCYRCGRGGHWS 180
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 11 AYDDKEAP--PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVED 68
A ++AP P++ ++VGNL+ T +++ELF KFG + V R++ FV+ D
Sbjct: 74 AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGFVHLDATGD 131
Query: 69 AKAAKDALQGSDFRGNPIKIEFA 91
A L G G P+K++ +
Sbjct: 132 VNDAIKELNGMMVDGQPMKVQLS 154
>gi|395530250|ref|XP_003767210.1| PREDICTED: ELAV-like protein 4 [Sarcophilus harrisii]
Length = 707
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 372 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 426
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 427 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 486
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 487 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 546
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 547 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 602
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 603 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 661
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 662 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 703
>gi|47212234|emb|CAF96201.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+ ++VGNL+ DTT +L +F +G + V+ R FAFV+ + A+ A L G
Sbjct: 6 TVKIFVGNLALDTTQEELSCIFEPYGQV--VSCSVLRQFAFVHLQGEGSAERAIRELNGR 63
Query: 80 DFRGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
+FRG + +E +R +P S ++VG +S + E+L++ F FG + + +K AF
Sbjct: 64 EFRGRNLVVEESR-GRPLHSTKVFVGNLSGMCTTEDLQQLFQTFGKVLECDKVK--GYAF 120
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
V EDA +A++ ++G G L V+ + QPS++
Sbjct: 121 VHMENKEDALQAIEALHGTSFKGRPLSVELSKVQPSKQ 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
S+ ++VGNLS T DL++LF FG + DKV + +AFV+ + EDA A +AL
Sbjct: 82 STKVFVGNLSGMCTTEDLQQLFQTFGKVLECDKV-----KGYAFVHMENKEDALQAIEAL 136
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGI 105
G+ F+G P+ +E ++ +PSK G I
Sbjct: 137 HGTSFKGRPLSVELSK-VQPSKQTPTGKI 164
>gi|410929393|ref|XP_003978084.1| PREDICTED: uncharacterized protein LOC101079487 [Takifugu rubripes]
Length = 568
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGNL+ DTT +L +F +G + V+ R FAFV+ + A+ A L G +F
Sbjct: 8 KIFVGNLALDTTQEELSAIFEPYGQV--VSCSVLRQFAFVHLQGEGAAERAIRELNGREF 65
Query: 82 RGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
RG + +E +R +P S ++VG +S + E+L++ F FG + + +K AFV
Sbjct: 66 RGRNLVVEESR-GRPLHSTKVFVGNLSGMCTTEDLQQLFQTFGKVLECDKVK--GYAFVH 122
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
EDA +A++ ++G G L V+ + QPS++
Sbjct: 123 METKEDALQAIEALHGTSFKGRPLSVELSKVQPSKQ 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
S+ ++VGNLS T DL++LF FG + DKV + +AFV+ + EDA A +AL
Sbjct: 82 STKVFVGNLSGMCTTEDLQQLFQTFGKVLECDKV-----KGYAFVHMETKEDALQAIEAL 136
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGI 105
G+ F+G P+ +E ++ +PSK G I
Sbjct: 137 HGTSFKGRPLSVELSK-VQPSKQTPTGKI 164
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
SN++V NLS TD +LKE+FGK+G + SR F FV F+ + A A
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQE 273
Query: 76 LQGSDF---------------RGNPIKIEFARPAKP------SKHLWVGGISQTVSKEEL 114
L G F R +K +F + + + +L++ + + + E+L
Sbjct: 274 LNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKL 333
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F ++GNI K ++D N + FV + EDA AL +NG+ +G + L V +
Sbjct: 334 RELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQ 393
Query: 170 SQPSRREQW 178
+ R+ +
Sbjct: 394 RKEDRKAKL 402
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 52/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L DA L ++F + G + V + S +A+V + DA A
Sbjct: 33 PATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARA 92
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + G PI+I ++ S+ ++++ + +++ + L + F FGNI
Sbjct: 93 LELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSC 152
Query: 128 KFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D G + FV++ + E A A+ +NG I +++ V F+R Q
Sbjct: 153 KIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQ---------- 202
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
D + FS+ Y ++ + ++ E
Sbjct: 203 ----DRENVSSNIKFSN---VYVKNLSDTVTDD------------------ELKEMFGKY 237
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
I + R SR + FV F + D A +A + L G++FND + +
Sbjct: 238 GTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYV 286
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKD 74
++NL++ NL + D L+ELF ++G + SR FV FK EDA A
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQ 107
+ G P+ + A+ + K SQ
Sbjct: 376 EMNGKMVGSKPLYVALAQRKEDRKAKLQAQFSQ 408
>gi|221316767|ref|NP_001138246.1| ELAV-like protein 4 isoform 2 [Homo sapiens]
gi|384475927|ref|NP_001245109.1| ELAV-like protein 4 [Macaca mulatta]
gi|114556464|ref|XP_001135692.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 11 [Pan troglodytes]
gi|332219803|ref|XP_003259047.1| PREDICTED: ELAV-like protein 4 isoform 2 [Nomascus leucogenys]
gi|395855037|ref|XP_003799978.1| PREDICTED: ELAV-like protein 4 isoform 1 [Otolemur garnettii]
gi|397518904|ref|XP_003829615.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pan paniscus]
gi|402854505|ref|XP_003891908.1| PREDICTED: ELAV-like protein 4 isoform 2 [Papio anubis]
gi|426329575|ref|XP_004025814.1| PREDICTED: ELAV-like protein 4 isoform 2 [Gorilla gorilla gorilla]
gi|14280327|gb|AAK57540.1| HUD1 [Homo sapiens]
gi|380810346|gb|AFE77048.1| ELAV-like protein 4 isoform 2 [Macaca mulatta]
Length = 366
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|147901721|ref|NP_001084762.1| RNA binding motif protein 15 [Xenopus laevis]
gi|47125240|gb|AAH70824.1| MGC83913 protein [Xenopus laevis]
Length = 830
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-----RSFAFVYFKRVEDAK 70
+A + L+VGNL + ++ +FG+FG + +V + ++ F+ F+ ++ A
Sbjct: 294 DARANRTLFVGNLDVIVKETEIYRVFGRFGTITEVDIKRAGRGQQTTYGFIKFENLDMAH 353
Query: 71 AAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
AK A+ G R +KI + + P+ LWVGG+ V L F +FG I +
Sbjct: 354 RAKVAMSGKMLRSYALKIGYGKVV-PTNRLWVGGLGPWVPVTALAREFDRFGTIRQIDYR 412
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGE--QLRVDF 167
K N A+++Y L+ A A + G +GG+ +LRVDF
Sbjct: 413 KGENWAYIQYESLDAAQAACTQMRGFPLGGDHRRLRVDF 451
>gi|297664981|ref|XP_002810891.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pongo abelii]
Length = 366
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 96 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 154
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 155 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 214
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 215 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 273
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 274 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 331
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 332 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 390
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 391 IASLNGYRLGDRVLQVSFKTNK 412
>gi|390465920|ref|XP_003733490.1| PREDICTED: ELAV-like protein 4 isoform 3 [Callithrix jacchus]
gi|403258119|ref|XP_003921626.1| PREDICTED: ELAV-like protein 4 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ TT+ DLKE+FGKFGA+ V S+ F FV F+ ++A A
Sbjct: 211 NNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGRSKCFGFVNFESPDEAALAVQD 270
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R +K +F + + + +L++ + TV E+L
Sbjct: 271 LNGKKFSDKEWYVGRAQKKSEREIELKEKFEKNLQEAADKYQNTNLYLKNLDDTVDDEKL 330
Query: 115 EEGFLKFGNIEDFKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +FG I K ++D N A FV + +DA+ AL +N + +G + L V +
Sbjct: 331 RELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYVALAQ 390
Query: 170 SQPSRR 175
+ R+
Sbjct: 391 RKEDRK 396
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 58/287 (20%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L DA L ++F + G + VT+ S +A+V + DA A
Sbjct: 30 PATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARA 89
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
+ L + G PI+I ++ PS ++++ + +++ + L + F FGNI
Sbjct: 90 LEMLNFTPINGRPIRIMYSN-RDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS 148
Query: 127 FKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPN 180
K D FV+Y R E A A++ +NG + +++ V F+R Q R+ P
Sbjct: 149 CKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQ--ERDNSPG 206
Query: 181 SHDARDGPI--IGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
+ + + + T D + + +SV RDG
Sbjct: 207 NVKFNNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGR----------------- 249
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
S+ + FV F S DEA A + L G+ F+D
Sbjct: 250 ------------------SKCFGFVNFESPDEAALAVQDLNGKKFSD 278
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 77/206 (37%), Gaps = 54/206 (26%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEA 149
P+ L+VG + +V +L + F + G + + +D + A+V Y+ DAA A
Sbjct: 30 PATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARA 89
Query: 150 LKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
L+ +N I G +R+ + PS R+ G F N
Sbjct: 90 LEMLNFTPINGRPIRIMYSNRDPSLRKS-------------GTANIFIKNLDK------- 129
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIK-----SYPSRNYSFVE 264
+D + L++ +FG I K + S+ Y FV+
Sbjct: 130 -----------------------SIDNKALYDTFCVFGNILSCKVATDPAGESKGYGFVQ 166
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITI 290
+ + A A E L G L ND ++ +
Sbjct: 167 YERDEAAHAAIEKLNGMLMNDKKVYV 192
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELF-GKFGALD------KVTTYSSRSFAFVYFKRVED 68
E PP +++VG+L+ D TD L ELF K+ ++ T SR + FV F D
Sbjct: 181 EVPPDHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDND 240
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAK-----------------PSKHLWVGGISQTVSK 111
A + G PI++ A P + ++ ++VGG+ VS+
Sbjct: 241 KTLAMTEMNGVYCSTRPIRVGLATPRRSQGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSE 300
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+EL + F K+G++ K FV++ DA EAL+ +NG IG + +R+ + RS
Sbjct: 301 DELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALQGLNGSTIGKQAIRLSWGRSP 360
Query: 172 PSRREQWPNSHDARDGPIIGRGTGF 196
S++ + H R+G + GT F
Sbjct: 361 TSKQSRGDYGH-RRNGNGMYYGTPF 384
>gi|395730526|ref|XP_003775742.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 402
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 67 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 121
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 122 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 181
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 182 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 241
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 242 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 297
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 298 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 356
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 357 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 398
>gi|119627249|gb|EAX06844.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_d [Homo sapiens]
Length = 365
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 30 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 84
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 85 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 144
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 145 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 204
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 205 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 260
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 261 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 319
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 320 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 361
>gi|348509183|ref|XP_003442131.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oreochromis
niloticus]
Length = 359
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 52/338 (15%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR 56
P N + DD + +NL V L + T + K LFG G + DK+T S
Sbjct: 25 PVISTNGSTDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSL 79
Query: 57 SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEE 113
+ FV + DA A + L G + IK+ +ARP+ S +L+V G+ +T+S+++
Sbjct: 80 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKD 139
Query: 114 LEEGFLKFGNIEDFKFLKDGNTA-------FVEYSRLEDAAEALKNINGRQIGG--EQLR 164
+E+ F ++G I + L D TA F+ + + +A EA+K +NG++ G E +
Sbjct: 140 MEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPIT 199
Query: 165 VDFLRSQPSRR-------EQWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHP---- 208
V F + PS++ + + + GP+ + F DN +++Y KR P
Sbjct: 200 VKF-ANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKRFSPITID 258
Query: 209 --QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSR 258
S G N GP ++V Y S + DE +L FG + +K + +
Sbjct: 259 SMTSLAGVNLTGPTGAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCK 317
Query: 259 NYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 318 GFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355
>gi|334321530|ref|XP_001373647.2| PREDICTED: ELAV-like protein 4 isoform 1 [Monodelphis domestica]
Length = 366
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|332219807|ref|XP_003259049.1| PREDICTED: ELAV-like protein 4 isoform 4 [Nomascus leucogenys]
gi|332808951|ref|XP_001135610.2| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 10 [Pan troglodytes]
gi|397518906|ref|XP_003829616.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pan paniscus]
gi|402854509|ref|XP_003891910.1| PREDICTED: ELAV-like protein 4 isoform 4 [Papio anubis]
gi|426329579|ref|XP_004025816.1| PREDICTED: ELAV-like protein 4 isoform 4 [Gorilla gorilla gorilla]
gi|119627246|gb|EAX06841.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_a [Homo sapiens]
Length = 402
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 67 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 121
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 122 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 181
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 182 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 241
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 242 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 297
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 298 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 356
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 357 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 398
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
SN++V NLS TD +LKE+FGK+G + SR F FV F+ + A A
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQE 273
Query: 76 LQGSDF---------------RGNPIKIEFARPAKP------SKHLWVGGISQTVSKEEL 114
L G F R +K +F + + + +L++ + + + E+L
Sbjct: 274 LNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKL 333
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F ++GNI K ++D N + FV + EDA AL +NG+ +G + L V +
Sbjct: 334 RELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQ 393
Query: 170 SQPSRREQW 178
+ R+ +
Sbjct: 394 RKEDRKAKL 402
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 52/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L DA L ++F + G + V + S +A+V + DA A
Sbjct: 33 PATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARA 92
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + G PI+I ++ S+ ++++ + +++ + L + F FGNI
Sbjct: 93 LELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSC 152
Query: 128 KFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D G + FV++ + E A A+ +NG I +++ V F+R Q
Sbjct: 153 KIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQ---------- 202
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
D + FS+ Y ++ + ++ E
Sbjct: 203 ----DRENVSSNIKFSN---VYVKNLSDTVTDD------------------ELKEMFGKY 237
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
I + R SR + FV F + D A +A + L G++FND + +
Sbjct: 238 GTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYV 286
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKD 74
++NL++ NL + D L+ELF ++G + SR FV FK EDA A
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQ 107
+ G P+ + A+ + K SQ
Sbjct: 376 EMNGKMVGSKPLYVALAQRKEDRKAKLQAQFSQ 408
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 35/279 (12%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL ++ L LF G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D +T AFV + + +A A++ +NG+ IG +R ++ R P RE
Sbjct: 128 RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREASKGGGQ 187
Query: 184 ARDGPIIG------RGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQ 237
+G+ Y +S P ++ + G+PP+V D+
Sbjct: 188 GGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTT----------VYCGGFPPNVISDD- 236
Query: 238 MLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
++H + FG I+ ++ + + +SF++F + + A A E
Sbjct: 237 LMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
>gi|390465922|ref|XP_003733491.1| PREDICTED: ELAV-like protein 4 isoform 4 [Callithrix jacchus]
gi|403258121|ref|XP_003921627.1| PREDICTED: ELAV-like protein 4 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 402
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 67 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 121
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 122 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 181
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 182 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 241
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 242 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 297
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 298 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 356
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 357 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 398
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
++ L+ GNL + A L + ++ + + V TT SR FAFV V+D +
Sbjct: 115 TTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVI 174
Query: 74 DALQGSDFRGNPIKIEFARPAKPSKHLW--------VGGISQTVSKEELEEGFLKFGNIE 125
L GS + G +K+ FA KP + L+ VG +S TV+ E L E F + G +
Sbjct: 175 KNLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVV 234
Query: 126 DFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ L DG T FV YS E+ EAL ++NG ++ G ++RV+
Sbjct: 235 GARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNL 282
>gi|390465924|ref|XP_002750851.2| PREDICTED: ELAV-like protein 4 isoform 1 [Callithrix jacchus]
Length = 366
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|221316771|ref|NP_001138248.1| ELAV-like protein 4 isoform 4 [Homo sapiens]
gi|114556460|ref|XP_001135439.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 8 [Pan troglodytes]
gi|332219809|ref|XP_003259050.1| PREDICTED: ELAV-like protein 4 isoform 5 [Nomascus leucogenys]
gi|395855043|ref|XP_003799981.1| PREDICTED: ELAV-like protein 4 isoform 4 [Otolemur garnettii]
gi|397518910|ref|XP_003829618.1| PREDICTED: ELAV-like protein 4 isoform 5 [Pan paniscus]
gi|402854511|ref|XP_003891911.1| PREDICTED: ELAV-like protein 4 isoform 5 [Papio anubis]
gi|426329581|ref|XP_004025817.1| PREDICTED: ELAV-like protein 4 isoform 5 [Gorilla gorilla gorilla]
gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens]
Length = 366
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|395730528|ref|XP_003775743.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 366
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 362
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDA 69
E+P ++ L+ GNL A L + +G+ + V T SR FAFV VED
Sbjct: 106 ESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDC 165
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKP--------SKHLWVGGISQTVSKEELEEGFLKF 121
A + L GS++ G +++ F+ KP L+VG +S +V+ E L + F ++
Sbjct: 166 NAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEY 225
Query: 122 GNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
GN+ + L DG T FV YS + AL+++NG ++ G +RV
Sbjct: 226 GNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRV 275
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 46/313 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
+NL V L + T +LK LFG G S + FV + +DA+ A + L G
Sbjct: 46 TNLIVNYLPQNMTQEELKSLFGSIG--------QSLGYGFVNYIDPKDAEKAINTLNGLR 97
Query: 81 FRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-- 135
+ IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L D T
Sbjct: 98 LQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGI 157
Query: 136 ----AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF---------------LRSQPSR 174
F+ + + +A EA+K +NG++ G E + V F L P+R
Sbjct: 158 SRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQNPNQAILSQLYQSPNR 217
Query: 175 REQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYP 229
R P + A R ++ G S S G N G P ++V Y
Sbjct: 218 RYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YN 276
Query: 230 PSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLF 283
+ DE +L FG + +K + + + FV + DEA A L G
Sbjct: 277 LAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 336
Query: 284 NDPRITIMFSSSE 296
D + + F +++
Sbjct: 337 GDRVLQVSFKTNK 349
>gi|297664975|ref|XP_002810888.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pongo abelii]
Length = 369
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 34 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 88
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 89 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 148
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 149 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 208
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 209 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 264
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 265 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 323
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 324 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 365
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL T+ADL+ +FG++GA+ S+ F FV F V+DA A +A
Sbjct: 203 NNVFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDGKSKGFGFVNFANVDDAAKAVEA 262
Query: 76 LQGSDFRGNPIKIEFARPAKPSK---------------------HLWVGGISQTVSKEEL 114
L G +F G + A+ + +L++ + +V EEL
Sbjct: 263 LNGKNFDGKEWYVGKAQKKSERELELKGQHEQITKETVDKYHGTNLYIKNLDDSVGDEEL 322
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +FG I K ++D N + FV +S E A AL +NG+ + G+ L V +
Sbjct: 323 MELFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGATRALGEMNGKMVAGKPLYVALAQ 382
Query: 170 SQPSRR 175
+ RR
Sbjct: 383 RKEDRR 388
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 110/289 (38%), Gaps = 70/289 (24%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+L+VG+L D D L +LF + + V T S + +V F DA A D
Sbjct: 25 SLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNAHDAAKAIDV 84
Query: 76 LQGSDFRGNPIKIEF------ARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L + G I+I + AR + + ++++ + + + + L + F FGNI K
Sbjct: 85 LNFTPLNGKIIRIMYSIRDPSARKSGAA-NVFIKNLDKAIDHKALYDTFSAFGNILSCKV 143
Query: 130 LKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHD 183
D + FV++ E A A+ +NG I +Q+ V FLR Q
Sbjct: 144 ATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVFVGPFLRKQ------------ 191
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
D SA + + +N +D +
Sbjct: 192 --------------DRESALSGTKFNNVFVKNL-----------------LDSMTEADLE 220
Query: 244 ILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFN 284
+FGE I S S+ + FV F +VD+A +A E L G+ F+
Sbjct: 221 RIFGEYGAITSAVVMRDVDGKSKGFGFVNFANVDDAAKAVEALNGKNFD 269
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKD 74
++N+++ NL L + F FG + KV T +S + FV F+ E A+ A D
Sbjct: 111 AANVFIKNLDKAIDHKALYDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAID 170
Query: 75 ALQGSDFRGNPIKI---------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + E A +++V + ++++ +LE F ++G I
Sbjct: 171 KLNGMLINDKQVFVGPFLRKQDRESALSGTKFNNVFVKNLLDSMTEADLERIFGEYGAIT 230
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++D + FV ++ ++DAA+A++ +NG+ G++ V + + R +
Sbjct: 231 SAVVMRDVDGKSKGFGFVNFANVDDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKG 290
Query: 181 SHD 183
H+
Sbjct: 291 QHE 293
>gi|391347173|ref|XP_003747839.1| PREDICTED: putative RNA-binding protein 15B-like [Metaseiulus
occidentalis]
Length = 620
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DDK + L+VGNL ++A+L+ LF ++G ++ + ++AF+ F ++
Sbjct: 183 DDKA---TRTLFVGNLEVTISEAELRRLFERYGVVEDIDVKRPPPGQGNAYAFIKFLNLD 239
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK L G KI + + A P+ +WVGG+ S LE F +FG I
Sbjct: 240 MAHRAKVELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGNWTSLGHLEREFDRFGAIRKV 298
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
F+K + A+++Y ++ A A + + G +GG ++LR+DF
Sbjct: 299 DFVKGESHAYIQYDSIDAAQAACQEMRGFALGGPDKRLRLDF 340
>gi|344278909|ref|XP_003411234.1| PREDICTED: ELAV-like protein 4-like [Loxodonta africana]
Length = 419
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 84 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 138
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 139 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 198
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 199 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 258
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 259 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 314
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 315 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 373
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 374 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 415
>gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus]
Length = 371
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+ +
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMIQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 266
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 267 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 325
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 326 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 141 CPSPMQTGPTNDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 195
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 196 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 255
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 256 KELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPI 315
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 316 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 371
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 372 ITIDSMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 430
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 431 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 472
>gi|221316773|ref|NP_001138249.1| ELAV-like protein 4 isoform 5 [Homo sapiens]
gi|114556458|ref|XP_001135525.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 9 [Pan troglodytes]
gi|332219805|ref|XP_003259048.1| PREDICTED: ELAV-like protein 4 isoform 3 [Nomascus leucogenys]
gi|397518908|ref|XP_003829617.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pan paniscus]
gi|402854507|ref|XP_003891909.1| PREDICTED: ELAV-like protein 4 isoform 3 [Papio anubis]
gi|426329577|ref|XP_004025815.1| PREDICTED: ELAV-like protein 4 isoform 3 [Gorilla gorilla gorilla]
gi|119627250|gb|EAX06845.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_e [Homo sapiens]
gi|221041752|dbj|BAH12553.1| unnamed protein product [Homo sapiens]
Length = 369
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 34 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 88
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 89 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 148
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 149 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 208
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 209 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 264
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 265 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 323
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 324 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 365
>gi|221316769|ref|NP_001138247.1| ELAV-like protein 4 isoform 3 [Homo sapiens]
gi|14280325|gb|AAK57539.1| HUD4 [Homo sapiens]
Length = 383
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 48 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 102
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 103 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 162
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 163 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 223 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 278
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 279 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 337
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 338 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
>gi|388852381|emb|CCF53996.1| related to JSN1-RNA-binding protein (pumilio family) [Ustilago
hordei]
Length = 1305
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 48/215 (22%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
A P+ +LW+G+L D T DL + F +G ++ ++ AF+ + + DA A+D +
Sbjct: 518 AQPTRSLWIGHLRPDATSQDLLQSFSPYGPIETFRMVPEKACAFINYVDIVDAVRARDDI 577
Query: 77 QG--------------------------------------SDFRGNPIKIEF-----ARP 93
G SD G + + A P
Sbjct: 578 VGRLACRLGFGTIGPEGQVRVGFGKPDSMPQSGMGSFAPMSDSFGGAVDVAGTEVFGAEP 637
Query: 94 A--KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALK 151
A +PS+ LW+G + T E L F FG IE + L + AF+ + RL+DA A K
Sbjct: 638 ANQEPSRALWIGSVPSTTCTEALMSIFSSFGPIESIRVLASKSCAFINFQRLDDAIIARK 697
Query: 152 NINGRQIGGEQL---RVDFLRSQPSRREQWPNSHD 183
+NGR++ G +L ++ F + Q E + S D
Sbjct: 698 ALNGRELLGTELGPVKIGFAKVQTRIPESYLGSLD 732
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 143/338 (42%), Gaps = 71/338 (21%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
A+P++ LW+G + + ++L + F +G IE F+ + + AF+ Y + DA A +I
Sbjct: 518 AQPTRSLWIGHLRPDATSQDLLQSFSPYGPIETFRMVPEKACAFINYVDIVDAVRARDDI 577
Query: 154 NGR--------QIGGE-QLRVDFLR--SQP-SRREQWPNSHDARDGPIIGRGTGFSDNHS 201
GR IG E Q+RV F + S P S + D+ G + GT
Sbjct: 578 VGRLACRLGFGTIGPEGQVRVGFGKPDSMPQSGMGSFAPMSDSFGGAVDVAGTEVFGAEP 637
Query: 202 AYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYS 261
A + PS+ LW+G PS E ++ + FG IE I+ S++ +
Sbjct: 638 ANQE--------------PSRALWIGSVPSTTCTEALM-SIFSSFGPIESIRVLASKSCA 682
Query: 262 FVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGK--------DYPGSYSGTKGP 313
F+ F+ +D+A A++ L GR +EL P K P SY G+ P
Sbjct: 683 FINFQRLDDAIIARKALNGR---------ELLGTELGPVKIGFAKVQTRIPESYLGSLDP 733
Query: 314 RSEMFFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLLSG 373
S F + ++ L SMQ + GH+ S GA H TL G
Sbjct: 734 GSPEF------QAAMETLA---SMQASA-DGHV-------------SQGAEEYHSTL--G 768
Query: 374 PDFKDFHSMQDPNAKNLDPNW-RRPSPSPGIRTSPTQG 410
PD +Q ++ L PN R PS +P T+ + G
Sbjct: 769 PDQLSRQHLQ-LGSQALAPNLSREPSRAPASATTLSSG 805
>gi|148235423|ref|NP_001081035.1| ELAV-like protein 2 [Xenopus laevis]
gi|288561905|sp|Q91903.2|ELAV2_XENLA RecName: Full=ELAV-like protein 2; AltName: Full=Elav like-1;
Short=Xel-1; AltName: Full=Protein ElrB; AltName:
Full=p45
gi|608539|gb|AAA96943.1| ribonucleoprotein [Xenopus laevis]
Length = 389
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 51/337 (15%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRS 57
P + N D K +NL V L + T +LK LFG G + DK+T S
Sbjct: 55 PVESNNTEDSK-----TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLG 109
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEEL 114
+ FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T++++EL
Sbjct: 110 YGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKEL 169
Query: 115 EEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVD 166
E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 170 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVK 229
Query: 167 F---------------LRSQPSRREQWPNSHDAR----DGPIIGRGTGFSDNHSAYKRSH 207
F L P+RR P + A+ D + G S
Sbjct: 230 FANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGGIKSRFSPMAIDG 289
Query: 208 PQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRN 259
S G N G ++V Y + DE +L FG + +K + +
Sbjct: 290 MTSLAGINFPGHAGTGWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG 348
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 349 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 385
>gi|395855039|ref|XP_003799979.1| PREDICTED: ELAV-like protein 4 isoform 2 [Otolemur garnettii]
Length = 383
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 48 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 102
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 103 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 162
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 163 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 223 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 278
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 279 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 337
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 338 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
>gi|297664979|ref|XP_002810890.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pongo abelii]
Length = 371
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 266
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 267 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 325
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 326 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|390465918|ref|XP_003733489.1| PREDICTED: ELAV-like protein 4 isoform 2 [Callithrix jacchus]
gi|403258117|ref|XP_003921625.1| PREDICTED: ELAV-like protein 4 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 371
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 266
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 267 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 325
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 326 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 32/190 (16%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAA 72
P +N++V NLS TT+ +LKE+FGKFG + V SR F FV F+ +DA A
Sbjct: 215 PKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARA 274
Query: 73 KDALQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSK 111
+ L G F R +K +F + K + +L++ + ++
Sbjct: 275 VEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDD 334
Query: 112 EE-LEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+E L+E F FG I K ++D N + FV + EDA+ AL +NG+ IG + L V
Sbjct: 335 DEKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYV 394
Query: 166 DFLRSQPSRR 175
+ + RR
Sbjct: 395 ALAQRKEERR 404
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 52/283 (18%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L DA L ++F + G++ V T S +A+V F DA A
Sbjct: 38 ATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARAL 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L + G PI+I ++ S+ ++++ + +++ + L + F FGNI K
Sbjct: 98 EMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCK 157
Query: 129 FLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
+ FV++ E A A+ +NG + +++ V F+R Q RE
Sbjct: 158 VATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQ--ERENV---- 211
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+G ++ Y ++ +S+ N K ++ + P + +
Sbjct: 212 -----------SGNPKFNNVYVKNLSESTTEDNL-----KEIFGKFGP--------ITSV 247
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+++ R SR + FV F + D+A RA E L G+ F+D
Sbjct: 248 VVM-----REGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDD 285
>gi|168037574|ref|XP_001771278.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677367|gb|EDQ63838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LW+GN+S D ++A +++ F +FG +D VT YSSR++AFV F+ +EDA AK LQ
Sbjct: 1 PPSRHLWIGNVSQDASEAAIRDKFSQFGDVDSVTVYSSRNYAFVNFRNLEDAVEAKTHLQ 60
Query: 78 GSDFRGNPIKIEFAR 92
G G I+IE+A+
Sbjct: 61 GFVLGGMAIRIEYAK 75
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLW+G +SQ S+ + + F +FG+++ N AFV + LEDA EA ++ G
Sbjct: 2 PSRHLWIGNVSQDASEAAIRDKFSQFGDVDSVTVYSSRNYAFVNFRNLEDAVEAKTHLQG 61
Query: 156 RQIGGEQLRVDFLR 169
+GG +R+++ +
Sbjct: 62 FVLGGMAIRIEYAK 75
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 219 PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGL 278
PPS+ LW+G S E + + FG+++ + Y SRNY+FV FR++++A AK L
Sbjct: 1 PPSRHLWIG-NVSQDASEAAIRDKFSQFGDVDSVTVYSSRNYAFVNFRNLEDAVEAKTHL 59
Query: 279 QGRLFNDPRITIMFS 293
QG + I I ++
Sbjct: 60 QGFVLGGMAIRIEYA 74
>gi|114556468|ref|XP_001135779.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 12 [Pan troglodytes]
gi|332219801|ref|XP_003259046.1| PREDICTED: ELAV-like protein 4 isoform 1 [Nomascus leucogenys]
gi|395855041|ref|XP_003799980.1| PREDICTED: ELAV-like protein 4 isoform 3 [Otolemur garnettii]
gi|397518902|ref|XP_003829614.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pan paniscus]
gi|402854503|ref|XP_003891907.1| PREDICTED: ELAV-like protein 4 isoform 1 [Papio anubis]
gi|426329573|ref|XP_004025813.1| PREDICTED: ELAV-like protein 4 isoform 1 [Gorilla gorilla gorilla]
gi|221042444|dbj|BAH12899.1| unnamed protein product [Homo sapiens]
gi|261860582|dbj|BAI46813.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 4
[synthetic construct]
Length = 371
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 266
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 267 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 325
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 326 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 44/270 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL ++ + LF + G++ K ++ +AFV F A A +
Sbjct: 44 LYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDPYAFVEFSDHGQASQALQTMNKR 103
Query: 80 DFRGNPIKIEFARP--AKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+K+ +A +PSK H++VG +S V ++L E F+ FG++ D K +
Sbjct: 104 LLHDREMKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVI 163
Query: 131 KDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDA 184
+D NT FV Y + E+A A++ +NG+ +G +R ++ +P +E+ N ++
Sbjct: 164 RDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSNYNEK 223
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
+ + +G DN S Y VG ++ DE + A
Sbjct: 224 SYDEVYNQTSG--DNTSVY----------------------VGNIANLTEDE--IRQAFA 257
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
+G I ++ + + Y+FV+F + + A +A
Sbjct: 258 SYGRISEVRIFKMQGYAFVKFENKNAAAKA 287
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 30/177 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
++VG+LS++ + L+E F FG + T S+ + FV + + E+A+ A + +
Sbjct: 133 VFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 192
Query: 77 QGSDFRGNPIKIEFA--RPA---KPSKH------------------LWVGGISQTVSKEE 113
G I+ +A +P KPS + ++VG I+ ++++E
Sbjct: 193 NGQWLGRRTIRTNWATRKPGDQEKPSNYNEKSYDEVYNQTSGDNTSVYVGNIA-NLTEDE 251
Query: 114 LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + F +G I + + K AFV++ AA+A+ +N + +GG+ +R + ++
Sbjct: 252 IRQAFASYGRISEVRIFKMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWGKT 308
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYS------SRSFAFVYFKRVEDAKAAKDAL 76
L+VGNL TD L LF + GA+ K + FAFV F A A ++
Sbjct: 40 LFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQSM 99
Query: 77 QGSDFRGNPIKIEFA-RPAKPSK----------HLWVGGISQTVSKEELEEGFLKFGNIE 125
G +++ +A P +P H++VG +S + +L E FL FG +
Sbjct: 100 NGRQLLEREMRVNWAVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGEVS 159
Query: 126 DFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
+ K ++D T FV Y R EDA A++ +NG+ +G +R ++ +P
Sbjct: 160 EAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGER 219
Query: 180 NSHDAR---DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDE 236
D D P G G H +++++ + V R + + +VG S+ DE
Sbjct: 220 RERDRNERGDRPHRGEG-----RHHHFEKTYDE--VFREAAADNTSV-YVGNINSLTEDE 271
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
+ FG+I ++ + S+ Y+FV+F + A RA
Sbjct: 272 --IRRGFERFGQIVEVRIFKSQGYAFVKFEQKESAARA 307
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 52/205 (25%)
Query: 14 DKEAPPSS---NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFK 64
D+ P +S +++VG+LSA+ L+E F FG + + T ++ + FV +
Sbjct: 122 DRNKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYP 181
Query: 65 RVEDAKAAKDALQGSDFRGNPIKIEFA---------------------RP---------- 93
R EDA+ A + + G I+ +A RP
Sbjct: 182 RREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGERRERDRNERGDRPHRGEGRHHHF 241
Query: 94 -----------AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSR 142
A + ++VG I+ +++++E+ GF +FG I + + K AFV++ +
Sbjct: 242 EKTYDEVFREAAADNTSVYVGNIN-SLTEDEIRRGFERFGQIVEVRIFKSQGYAFVKFEQ 300
Query: 143 LEDAAEALKNINGRQIGGEQLRVDF 167
E AA A+ +N + + G+ +R +
Sbjct: 301 KESAARAIVQMNNQDVSGQMVRCSW 325
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 128/328 (39%), Gaps = 60/328 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 47 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 106
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 107 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 166
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FG I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 167 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP-- 224
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKR-------------SHPQSSVGR------- 214
P + IG + Y R ++++ +
Sbjct: 225 ----PAPKSTYECRCIGEEKEMWNFGEKYARFSCSRRLIAEIDEKQIKTTIQKSNTKQLS 280
Query: 215 -----NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
N+ P + ++ G S + EQ++ FG+I I+ +P + YSFV F S +
Sbjct: 281 YDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 339
Query: 270 EARRAKEGLQGRLFNDPRITIMFSSSEL 297
A A + G + + L
Sbjct: 340 SAAHAIVSVNGTTIEGHVVKCYWGKETL 367
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 31/202 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ TTD DLK FG++G + S+ F FV F+ +DA A ++
Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGKSKGFGFVNFENADDAARAVES 274
Query: 76 LQGSDF---------------RGNPIKIEFARPAKP------SKHLWVGGISQTVSKEEL 114
L G F R +++ + + K S +L+V + ++S E+L
Sbjct: 275 LNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKL 334
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG + K ++D N + FV +S E+A EA+ ++G+ I + L V +
Sbjct: 335 KEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMSQLSGKMIESKPLYVAIAQ 394
Query: 170 SQPSRREQWPNSHDARDGPIIG 191
+ RR Q+ P +G
Sbjct: 395 RKEDRRAQFSQVRPVAMQPSVG 416
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 70/292 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TD+ L + F + G + V T S + +V F +DA A
Sbjct: 35 TTSLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAI 94
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
L G PI++ ++ PS ++++ + +++ + L + F FGNI
Sbjct: 95 QELNYIPLYGKPIRVMYSH-RDPSVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSC 153
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D + FV+Y+ E A +A++ +NG + +Q+ V FLR Q R+ N
Sbjct: 154 KVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQ--ERDSTANK 211
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
T F++ Y ++ +S+ + L N
Sbjct: 212 ------------TKFTN---VYVKNLAESTTDDD-----------------------LKN 233
Query: 242 AMILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
A FGE +I S S+ + FV F + D+A RA E L G F+D
Sbjct: 234 A---FGEYGKITSAVVMKDGDGKSKGFGFVNFENADDAARAVESLNGHKFDD 282
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
SSNL+V NL +D LKE+F FG + +S+ FV F E+A A
Sbjct: 317 SSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMS 376
Query: 75 ALQGSDFRGNPIKIEFAR 92
L G P+ + A+
Sbjct: 377 QLSGKMIESKPLYVAIAQ 394
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKA 71
+P +N++V NLS TT+ +LKE+FGKFG + V SR F FV F+ +DA
Sbjct: 217 SPKFNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKSRCFGFVNFENPDDAAR 276
Query: 72 AKDALQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVS 110
A + L G R +K +F + K + +L++ + +V
Sbjct: 277 AVEDLNGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVD 336
Query: 111 KEE-LEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
+E L+E F +FG I K ++D N + FV + EDA+ AL +NG+ +G + L
Sbjct: 337 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLY 396
Query: 165 VDFLRSQPSRREQW 178
V + + RR +
Sbjct: 397 VALAQRKEERRARL 410
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 119/293 (40%), Gaps = 64/293 (21%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAAKD 74
++L+VG+L DA L ++F + G++ V T S +A+V F DA A +
Sbjct: 42 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME 101
Query: 75 ALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L + G PI+I ++ S+ ++++ + +++ + L + F FG I K
Sbjct: 102 MLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKV 161
Query: 130 LKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHD 183
+ FV+Y + E A A+ +NG + +++ V F+R Q RE
Sbjct: 162 ATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ--ERENV----- 214
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRN------RDGPPSKILWVGYPPSVQMDEQ 237
G ++ Y ++ +S+ N + GP + ++ V
Sbjct: 215 ----------FGSPKFNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVV----------- 253
Query: 238 MLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
R SR + FV F + D+A RA E L G+ +D + +
Sbjct: 254 -------------RADDGKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELYV 293
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 50/287 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTY---SSRSFAFVYFKRVEDAKAAKD 74
++N+++ NL + L + F FG + KV T S+ + FV +++ E A+ A +
Sbjct: 129 AANIFIKNLDKSIDNKALFDTFSAFGTILSCKVATEISGESKGYGFVQYEQDESAQNAIN 188
Query: 75 ALQGSDFRGNPIKIE-FARPAKPSK--------HLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + F R + +++V +S++ +++ L+E F KFG I
Sbjct: 189 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEMFGKFGPIT 248
Query: 126 DFKFLK--DGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++ DG + FV + +DAA A++++NG+++ ++L V + + R Q
Sbjct: 249 SVIVVRADDGKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELYVGRAQKKSEREMQLKE 308
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
+ N ++ + +N DG SV DE+ L
Sbjct: 309 KFE-------------KSNKETADKNQGTNLYLKNLDG------------SVDDDEK-LK 342
Query: 241 NAMILFGEIERIKSYPSRN-----YSFVEFRSVDEARRAKEGLQGRL 282
FG I K N FV F+S ++A RA + G++
Sbjct: 343 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAMNGKM 389
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + FS S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFS-RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 272
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 273 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 332
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 333 RVLQVSFKTNK 343
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 32/191 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKA 71
+P +N++V NLS TD DLK+LFG +G + T SR F FV F+ + A A
Sbjct: 210 SPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAA 269
Query: 72 AKDALQGSDFRGNPI------------------KIEFARPAKPSK----HLWVGGISQTV 109
A + L G+ + + KIE R ++ K +L++ + +
Sbjct: 270 AVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSF 329
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
S E+L++ F +FG I K + D N + FV +S E+A++AL +NG+ IG + L
Sbjct: 330 SDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLY 389
Query: 165 VDFLRSQPSRR 175
V + + R+
Sbjct: 390 VAVAQRKEERK 400
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 115/294 (39%), Gaps = 68/294 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + + L +LF + + + T SS +A+V F +DA A
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 74 DALQGSDFRGNPIKIEFAR---PAKPSKH--LWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L + G PI+I F++ + S H +++ + ++ + L + F FG + K
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCK 153
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D + FV++ E A A+K +NG I +Q+ V F+R Q REQ S
Sbjct: 154 VALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQ--EREQTNGS- 210
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
P ++V DE +
Sbjct: 211 ------------------------------------PKFTNVYVKNLSETYTDEDLKK-- 232
Query: 243 MILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
LFG I S SR + FV F++ D A A E L G N+ R+
Sbjct: 233 --LFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRV 284
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 32/194 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKA 71
+P +N++V NLS TT+ +LKELFG FG + V SR F FV F+ +DA
Sbjct: 217 SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVH 276
Query: 72 AKDALQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVS 110
A + L G F R +K F + K + +L++ + +V
Sbjct: 277 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 336
Query: 111 KEE-LEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
+E L+E F +FG I K ++D N + FV + EDA AL +NG+ +G + L
Sbjct: 337 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLY 396
Query: 165 VDFLRSQPSRREQW 178
V + + RR +
Sbjct: 397 VALAQRKEERRARL 410
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 52/285 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
L+VG+L DA L ++F + G++ V T S +A+V F DA A + L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 77 QGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+ G PI+I ++ S+ ++++ + +++ + L + F FGNI K
Sbjct: 104 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 163
Query: 132 D-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHDAR 185
+ FV+Y + E A A+ +NG + +++ V F+R Q RE
Sbjct: 164 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ--ERENV------- 214
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
G ++ Y ++ +S+ N K L+ + P + + +++
Sbjct: 215 --------FGSPKFNNVYVKNLSESTTEDNL-----KELFGNFGP--------ITSVIVV 253
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
R SR + FV F + D+A A E L G+ F+D + +
Sbjct: 254 -----RADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 293
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 50/287 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTY---SSRSFAFVYFKRVEDAKAAKD 74
++N+++ NL + L + F FG + KV T S+ + FV +++ E A+ A +
Sbjct: 129 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAIN 188
Query: 75 ALQGSDFRGNPIKI-EFARPAKPSK--------HLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + F R + +++V +S++ +++ L+E F FG I
Sbjct: 189 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 248
Query: 126 DFKFLK--DGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++ DG + FV + +DA A++++NG++ ++L V + + R Q
Sbjct: 249 SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKE 308
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
S + N R+ + +N DG SV DE+ L
Sbjct: 309 SFE-------------KSNKETADRNQGTNLYLKNLDG------------SVDDDEK-LK 342
Query: 241 NAMILFGEIERIKSYPSRN-----YSFVEFRSVDEARRAKEGLQGRL 282
FG I K N FV F+S ++A RA + G++
Sbjct: 343 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKM 389
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 20/172 (11%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDA 69
E+P ++ L+ GNL A L + +G+ + V T SR FAFV VED
Sbjct: 106 ESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDC 165
Query: 70 KAAKDALQGSDFRGNPIKIEFARPAKP--------SKHLWVGGISQTVSKEELEEGFLKF 121
A + L GS++ G +++ F+ KP L+VG +S +V+ E L + F ++
Sbjct: 166 NAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEY 225
Query: 122 GNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
GN+ + L DG T FV YS + AL+++NG ++ G +R+
Sbjct: 226 GNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISL 277
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + FS S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFS-RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 272
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 273 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 332
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 333 RVLQVSFKTNK 343
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT+ DL+E+FGKFG + V S+ F FV F+ ++A A
Sbjct: 213 NNVFVKNLSETTTEDDLREIFGKFGTITSVVVMREGDGRSKCFGFVNFESPDEAALAVQD 272
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R +K +F + + + +L++ + TV E+L
Sbjct: 273 LNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQETADKYQNTNLYLKNLDDTVDDEKL 332
Query: 115 EEGFLKFGNIEDFKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +FG I K ++D N A FV + EDA+ AL +N + +G + L V +
Sbjct: 333 RELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALAEMNNKMVGSKPLYVALAQ 392
Query: 170 SQPSRREQW 178
+ R+ +
Sbjct: 393 RKEDRKARL 401
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L DA L ++F + G + VTT S +A+V + DA A
Sbjct: 32 PATSLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARA 91
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
+ L + G PI+I ++ PS ++++ + +++ + L + F FGNI
Sbjct: 92 LEMLNFTPINGRPIRIMYSN-RDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS 150
Query: 127 FKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQ 171
K D + FV+Y R E A A++ +NG + +++ V F+R Q
Sbjct: 151 CKVATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFIRKQ 201
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 54/206 (26%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEA 149
P+ L+VG + +V +L + F + G + + +D T A+V Y+ DAA A
Sbjct: 32 PATSLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARA 91
Query: 150 LKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
L+ +N I G +R+ + PS R+ G F N
Sbjct: 92 LEMLNFTPINGRPIRIMYSNRDPSLRKS-------------GTANIFIKNLDK------- 131
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIK-----SYPSRNYSFVE 264
+D + L++ +FG I K S S+ Y FV+
Sbjct: 132 -----------------------SIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQ 168
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITI 290
+ + A A E L G L ND ++ +
Sbjct: 169 YERDEAAHAAIEKLNGMLMNDKKVYV 194
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
++NL++ NL D L+ELF +FGA+ +SR FV FK EDA A
Sbjct: 315 NTNLYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALA 374
Query: 75 ALQGSDFRGNPIKIEFAR 92
+ P+ + A+
Sbjct: 375 EMNNKMVGSKPLYVALAQ 392
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 32/194 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKA 71
+P +N++V NLS TT+ +LKELFG FG + V SR F FV F+ +DA
Sbjct: 217 SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVH 276
Query: 72 AKDALQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVS 110
A + L G F R +K F + K + +L++ + +V
Sbjct: 277 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 336
Query: 111 KEE-LEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
+E L+E F +FG I K ++D N + FV + EDA AL +NG+ +G + L
Sbjct: 337 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLY 396
Query: 165 VDFLRSQPSRREQW 178
V + + RR +
Sbjct: 397 VALAQRKEERRARL 410
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 122/286 (42%), Gaps = 52/286 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+L+VG+L DA L ++F + G++ V T S +A+V F DA A +
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
L + G PI+I ++ S+ ++++ + +++ + L + F FGNI K
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 162
Query: 131 KD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHDA 184
+ FV+Y + E A A+ +NG + +++ V F+R Q RE
Sbjct: 163 TEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ--ERENV------ 214
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
G ++ Y ++ +S+ N K L+ + P + + ++
Sbjct: 215 ---------FGSPKFNNVYVKNLSESTTEDNL-----KELFGNFGP--------ITSVIV 252
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
+ R SR + FV F + D+A A E L G+ F+D + +
Sbjct: 253 V-----RADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 293
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 50/287 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTY---SSRSFAFVYFKRVEDAKAAKD 74
++N+++ NL + L + F FG + KV T S+ + FV +++ E A+ A +
Sbjct: 129 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAIN 188
Query: 75 ALQGSDFRGNPIKI-EFARPAKPSK--------HLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + F R + +++V +S++ +++ L+E F FG I
Sbjct: 189 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 248
Query: 126 DFKFLK--DGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++ DG + FV + +DA A++++NG++ ++L V + + R Q
Sbjct: 249 SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKE 308
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
S + N R+ + +N DG SV DE+ L
Sbjct: 309 SFE-------------KSNKETADRNQGTNLYLKNLDG------------SVDDDEK-LK 342
Query: 241 NAMILFGEIERIKSYPSRN-----YSFVEFRSVDEARRAKEGLQGRL 282
FG I K N FV F+S ++A RA + G++
Sbjct: 343 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKM 389
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 55/304 (18%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 83
Query: 80 DFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLKF 121
G +K+ +A K H++VG +S ++ E+++ F F
Sbjct: 84 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAAFAPF 143
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G I D + +KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 144 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 203
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQ 233
+ S Y+ + Q S N+ P + ++ G S
Sbjct: 204 K------------------------STYESNTKQLSYDDVVNQSSPSNCTVYCGGVTS-G 238
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
+ EQ++ FG+I I+ +P + YSFV F S + A A + G + +
Sbjct: 239 LTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWG 298
Query: 294 SSEL 297
L
Sbjct: 299 KETL 302
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 121 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 180
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 181 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLT 240
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 241 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 295
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 11 AYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
+YDD + +P + ++ G +++ T+ +++ F FG + ++ + + ++FV F E
Sbjct: 215 SYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 274
Query: 68 DAKAAKDALQGSDFRGNPIKIEFAR 92
A A ++ G+ G+ +K + +
Sbjct: 275 SAAHAIVSVNGTTIEGHVVKCYWGK 299
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + FS S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFS-RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 272
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 273 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 332
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 333 RVLQVSFKTNK 343
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 41/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 126
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 127 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 186
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 187 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 245
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + FS S S G N G P ++V Y +
Sbjct: 246 QLYQSPNRR--YPGPLAQQAQRFS-RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 301
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 302 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 361
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 362 RVLQVSFKTNK 372
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 61/288 (21%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRV 66
D+++ S++L+VG+L D T+A L E+F G + + T S +A+V + V
Sbjct: 23 DNQQLYNSASLYVGDLQPDVTEAILYEVFNSVGPVSSIRVCRDSITRKSLGYAYVNYYSV 82
Query: 67 EDAKAAKDALQGSDFRGNPIKIEFARP-----AKPSKHLWVGGISQTVSKEELEEGFLKF 121
+DA+AA ++L D +G+P +I ++ + +++V + +++ + + F F
Sbjct: 83 QDAEAALESLNYIDIKGHPTRIMWSNKDPTLRKSGAGNIFVKNLDRSIDTKAFYDTFSHF 142
Query: 122 GNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRR 175
G I K D N FV Y E A EA++ +NG IGG+++ V F++ Q
Sbjct: 143 GPILSCKVAMDENGVSKGYGFVHYDTEESAKEAIEKVNGMVIGGKKVEVSPFIKKQ---- 198
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
++ P S D F++ Y R+ P S W D
Sbjct: 199 DRDPASVDV-----------FTN---LYVRNFPVS--------------W---------D 221
Query: 236 EQMLHNAMILFGEIERI---KSYPSRNYSFVEFRSVDEARRAKEGLQG 280
E+ L + +GEI + + R ++FV F + A+ A E L G
Sbjct: 222 EEALKQFLDKYGEITSMMIKEDGKGRKFAFVNFAEPEMAKEAVEALNG 269
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 31/204 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS---RSFAFVYFKRVEDAKAAKDALQ 77
+NL+V N + LK+ K+G + + R FAFV F E AK A +AL
Sbjct: 209 TNLYVRNFPVSWDEEALKQFLDKYGEITSMMIKEDGKGRKFAFVNFAEPEMAKEAVEALN 268
Query: 78 GSDF-----------------RGNPIKIEF------ARPAKPSKHLWVGGISQTVSKEEL 114
G+ R +K ++ + +K S +L++ + + + E L
Sbjct: 269 GTKLEEGSEPLLVCPHQDKAKRQAFLKSQYISGLDGSIASKASSNLYIKNLDDSFTDESL 328
Query: 115 EEGFLKFGNIEDFKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +FG+I K ++D + FV +SR E+A +A+ ++ + + G+ L V
Sbjct: 329 QELFGQFGSITSCKIMRDASGVSRGFGFVCFSRPEEATKAIAGMHLKIVKGKPLYVGLAE 388
Query: 170 SQPSRREQWPNSHDARDGPIIGRG 193
+ R + S +R+G + +G
Sbjct: 389 KKEQRLSRLQQSSRSRNGDSMNQG 412
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKD 74
SSNL++ NL TD L+ELFG+FG++ SR F FV F R E+A A
Sbjct: 311 SSNLYIKNLDDSFTDESLQELFGQFGSITSCKIMRDASGVSRGFGFVCFSRPEEATKAIA 370
Query: 75 ALQGSDFRGNPIKIEFA 91
+ +G P+ + A
Sbjct: 371 GMHLKIVKGKPLYVGLA 387
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT+ DLK++FG++G + SR F FV F+ +DA + +A
Sbjct: 208 NNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFENPDDAAQSVEA 267
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G F R +K F + K + +L+V + +++ ++L
Sbjct: 268 LNGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETVDKFQGLNLYVKNLDDSITDDKL 327
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +FG I K ++D N + FV +S E+A+ AL +NG+ + + L V +
Sbjct: 328 KELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTEMNGKMVVSKPLYVALAQ 387
Query: 170 SQPSRR 175
+ RR
Sbjct: 388 RKEERR 393
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKD 74
++L+VG+L + T+ L +LF + G + + T+ S + +V + V DA A +
Sbjct: 29 TSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQAIE 88
Query: 75 ALQGSDFRGNPIKIEFA-RPAKPSK----HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L + G PI+I ++ R K ++++ + + + + L + F FG+I K
Sbjct: 89 VLNFTPVNGKPIRIMYSYRDPTIRKSGTGNIYIKNLDKAIDNKALHDTFSAFGSILSCKV 148
Query: 130 LKDG-----NTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQ 171
D FV++ E A A+ +NG + +Q+ V FLR Q
Sbjct: 149 ATDSLGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRKQ 196
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 54/202 (26%)
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNI 153
L+VG + Q V++ +L + F + G + + +D + +V Y+ + DAA+A++ +
Sbjct: 31 LYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQAIEVL 90
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
N + G+ +R+ + RD I GTG + Y ++ ++
Sbjct: 91 NFTPVNGKPIRI---------------MYSYRDPTIRKSGTG-----NIYIKNLDKA--- 127
Query: 214 RNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP-----SRNYSFVEFRSV 268
+D + LH+ FG I K S Y FV+F +
Sbjct: 128 --------------------IDNKALHDTFSAFGSILSCKVATDSLGQSLGYGFVQFDNE 167
Query: 269 DEARRAKEGLQGRLFNDPRITI 290
+ A+ A + L G L ND ++ +
Sbjct: 168 ESAKNAIDKLNGMLLNDKQVYV 189
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 32/191 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKA 71
+P +N++V NLS TD DLK+LFG +G + T SR F FV F+ + A A
Sbjct: 210 SPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAA 269
Query: 72 AKDALQGSDFRGNPI------------------KIEFARPAKPSK----HLWVGGISQTV 109
A + L G+ + + KIE R ++ K +L++ + +
Sbjct: 270 AVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSF 329
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
S E+L++ F +FG I K + D N + FV +S E+A++AL +NG+ IG + L
Sbjct: 330 SDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLY 389
Query: 165 VDFLRSQPSRR 175
V + + R+
Sbjct: 390 VAVAQRKEERK 400
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 115/294 (39%), Gaps = 68/294 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + + L +LF + + + T SS +A+V F +DA A
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 74 DALQGSDFRGNPIKIEFAR---PAKPSKH--LWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L + G PI+I F++ + S H +++ + ++ + L + F FG + K
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCK 153
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D + FV++ E A A+K +NG I +Q+ V F+R Q REQ S
Sbjct: 154 VALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQ--EREQTNGS- 210
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
P ++V DE +
Sbjct: 211 ------------------------------------PKFTNVYVKNLSETYTDEDLKK-- 232
Query: 243 MILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
LFG I S SR + FV F++ D A A E L G N+ R+
Sbjct: 233 --LFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRV 284
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL T+ L LF + G++ ++ +AFV F + A A A+
Sbjct: 12 LYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNNDPYAFVEFVNHQAASTALIAMNKR 71
Query: 80 DFRGNPIKIEFA-----RPAKPSK---HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
IK+ +A +P + + H++VG +S + L E F FG I + + ++
Sbjct: 72 HVLEKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVR 131
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + +A A+ +NG+ +G +R ++ +P P + +R
Sbjct: 132 DPQTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPP----PRTERSR 187
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
G + +Y+ + QSS P + ++ G + ++E ++ A
Sbjct: 188 QG---------NAKAVSYEEVYNQSS-------PTNCTVYCG-GFTNGINEDLIEKAFSR 230
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
FG I+ I+S+ + Y+F+ F + + A A E + N ++ +
Sbjct: 231 FGTIQDIRSFKDKGYAFIRFSTKEAATHAIEAMHNAEINGQQVKCFW 277
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + +A++A A
Sbjct: 99 HIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHA 158
Query: 76 LQGSDFRGNPIKIEFA--RPAKPSKH-------------------------LWVGGISQT 108
+ G I+ ++ +P P ++ GG +
Sbjct: 159 MNGQWLGNRSIRTNWSTRKPPPPRTERSRQGNAKAVSYEEVYNQSSPTNCTVYCGGFTNG 218
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++++ +E+ F +FG I+D + KD AF+ +S E A A++ ++ +I G+Q++
Sbjct: 219 INEDLIEKAFSRFGTIQDIRSFKDKGYAFIRFSTKEAATHAIEAMHNAEINGQQVKC 275
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 40/259 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQ 77
L+VGNLS D T+A + +LF + G T + + FV F A AA A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMN 67
Query: 78 GSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
G G +K+ +A K H++VG +S ++ E+++ F FG I D + +
Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVV 127
Query: 131 KDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDA 184
KD T FV + DA A++ + G+ +GG Q+R ++ +P
Sbjct: 128 KDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP------------ 175
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
P + +Y QSS P + ++ G S + EQ++
Sbjct: 176 ---PAPKSTYELNTKQLSYDEVVSQSS-------PSNCTVYCGGVTS-GLTEQLMRQTFS 224
Query: 245 LFGEIERIKSYPSRNYSFV 263
FG+I I+ +P + YSF+
Sbjct: 225 PFGQILEIRVFPDKGYSFI 243
>gi|357601983|gb|EHJ63226.1| RNA recognition motif protein split ends [Danaus plexippus]
Length = 518
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + +D +L+ +FG++G ++ + + +FAFV ++ ++ A AK
Sbjct: 68 TRTLFAGNLEINISDEELRRIFGRYGIVEDIDIKRPPPGTGNAFAFVRYQTLDMAHRAKV 127
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++ K
Sbjct: 128 ELSGQYIGKFQCKIGYGK-ATPTTRVWVGGLGPWTSVAQLEREFDRFGAIKKIEYAKGEP 186
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A++ Y ++ A A+K + G +GG +LR+DF
Sbjct: 187 HAYILYDSIDAAQAAVKEMRGFPLGGPDRRLRIDF 221
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT+ DLK+ FG++G + ++ F FV F+ +DA A +A
Sbjct: 203 NNVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKTKCFGFVNFENADDAATAVEA 262
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R N +K+ F + K + +L++ + ++ + L
Sbjct: 263 LNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDRL 322
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
++ F FG I K ++D N + FV +S E+A++AL +NG+ + + L V +
Sbjct: 323 KQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVALAQ 382
Query: 170 SQPSRR 175
+ RR
Sbjct: 383 RKEDRR 388
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 68/291 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L A+ TD+ L +LF + G + V TT S + +V + +DA A
Sbjct: 23 TTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARAL 82
Query: 74 DALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
D L + G+PI+I ++ S ++++ + + + + L + F FGNI K
Sbjct: 83 DMLNFTPLNGSPIRIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILSCK 142
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D + FV++ E A +A++ +NG + +Q+ V FLR Q
Sbjct: 143 VATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQ----------- 191
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+ SA ++ + +N S E+ L A
Sbjct: 192 ---------------ERESAIDKTRFNNVYVKNL--------------SETTTEEDLKKA 222
Query: 243 MILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
FGE I S ++ + FV F + D+A A E L G+ F+D
Sbjct: 223 ---FGEYGTITSAVVMRDGDGKTKCFGFVNFENADDAATAVEALNGKKFDD 270
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 54/205 (26%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEAL 150
+ L+VG + V+ L + F + G + + +D T +V YS +DAA AL
Sbjct: 23 TTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARAL 82
Query: 151 KNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS 210
+N + G +R+ + PS R+ G G F N
Sbjct: 83 DMLNFTPLNGSPIRIMYSHRDPSVRKS-------------GSGNIFIKNLDK-------- 121
Query: 211 SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIK-----SYPSRNYSFVEF 265
+D + LH+ FG I K S S+ Y FV+F
Sbjct: 122 ----------------------GIDHKALHDTFSAFGNILSCKVATDSSGQSKGYGFVQF 159
Query: 266 RSVDEARRAKEGLQGRLFNDPRITI 290
+ + A++A E L G L ND ++ +
Sbjct: 160 DNEESAQKAIEKLNGMLLNDKQVYV 184
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 53 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 111
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 112 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 171
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 172 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 230
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 231 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 288
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 289 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 347
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 348 IASLNGYRLGDRVLQVSFKTNK 369
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 54/290 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQ 77
L+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+
Sbjct: 9 TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMN 68
Query: 78 GSDFRGNPIKIEFARPAKPSK---------------------HLWVGGISQTVSKEELEE 116
G G +K+ +A K H++VG +S ++ E+++
Sbjct: 69 GRKILGKEVKVNWATTPSSQKKDTSSKYIVAITVHLRDQDHFHVFVGDLSPEITTEDIKS 128
Query: 117 GFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 129 AFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 188
Query: 171 QPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPP 230
+P + S ++ K+ + V N+ P + ++ G
Sbjct: 189 KPPAPK--------------------STQENSTKQLRFEDVV--NQSSPKNCTVYCGGIA 226
Query: 231 SVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 227 S-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 275
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 111 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 170
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 171 MGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 230
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 231 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 290
Query: 171 QP 172
P
Sbjct: 291 SP 292
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 211 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 270
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 271 VSVNGTTIEGHVVKCYWGK 289
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 53 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 111
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 112 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 171
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 172 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 230
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 231 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 288
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 289 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 347
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 348 IASLNGYRLGDRVLQVSFKTNK 369
>gi|170032157|ref|XP_001843949.1| RNA recognition motif protein split ends [Culex quinquefasciatus]
gi|167871898|gb|EDS35281.1| RNA recognition motif protein split ends [Culex quinquefasciatus]
Length = 708
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 8/155 (5%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
+ L+ GNL + +D +L+ +FGK+G ++ + + +FAFV ++ ++ A AK
Sbjct: 246 TRTLFAGNLEINISDDELRRIFGKYGIVEDIDIKRPPPGTGNAFAFVRYQTLDMAHRAKV 305
Query: 75 ALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
L G KI + + A P+ +WVGG+ S +LE F +FG I+ ++ K
Sbjct: 306 ELSGQYIGKFQCKIGYGK-ATPTTRIWVGGLGAWTSVTQLEREFDRFGAIKKIEYNKGDT 364
Query: 135 TAFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF 167
A++ Y ++ A A+K + G +G ++R+DF
Sbjct: 365 QAYILYDSIDAATAAVKEMRGFPLGAPDRRIRLDF 399
>gi|70983602|ref|XP_747328.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|66844954|gb|EAL85290.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|159123666|gb|EDP48785.1| nucleic acid-binding protein [Aspergillus fumigatus A1163]
Length = 324
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAK 73
P ++VGNL D T DLK +FG +++V + SR FA+V+F +E AK+
Sbjct: 142 PRQTVYVGNLFYDVTAEDLKNHMQQFGVVERVDLITDNRGLSRGFAYVHFDSIEAAKSCV 201
Query: 74 DALQGSDFRGNPIKIEFA-----RPAKP-SKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+A+ F G I ++A RP +P S+ L++G +S ++ +L E F N+ D
Sbjct: 202 EAMHLQIFEGRRITAQYASSGGTRPLRPASRTLYLGNLSFEMTDRDLNELFRDINNVIDV 261
Query: 128 KFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ D T A E+ +E A +A + ++G+ G ++RVD+
Sbjct: 262 RVSVDRRTGQPRGFAHAEFLDVESAQKAFEILSGKAPYGRRIRVDY 307
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKA 71
P S L++GNLS + TD DL ELF + V T R FA F VE A+
Sbjct: 229 PASRTLYLGNLSFEMTDRDLNELFRDINNVIDVRVSVDRRTGQPRGFAHAEFLDVESAQK 288
Query: 72 AKDALQGSDFRGNPIKIEFA 91
A + L G G I+++++
Sbjct: 289 AFEILSGKAPYGRRIRVDYS 308
>gi|608549|gb|AAA96940.1| ribonucleoprotein [Danio rerio]
gi|68085524|gb|AAH65965.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Danio rerio]
Length = 367
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 60/345 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 29 CPSPMQTGGSNDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 83
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 84 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 143
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT---------AFVEYSRLEDAAEALKNINGRQIGG-- 160
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G
Sbjct: 144 KELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAA 203
Query: 161 EQLRVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKR 205
E + V F L P+RR P H A+ R + KR
Sbjct: 204 EPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKR 259
Query: 206 SHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK---- 253
P S VG N G ++V Y S DE +L FG + +K
Sbjct: 260 FSPITIDSMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRD 318
Query: 254 --SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + + FV + DEA A L G D + + F +++
Sbjct: 319 FNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 363
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 50/273 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL + T+ + LF + G++ K S+ +AFV F D A ALQ
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFS---DHGQASQALQTM 104
Query: 80 DFR---GNPIKIEFA-RPAKPSK--------HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ R +K+ +A P + H++VG +S V ++L E F FG++ D
Sbjct: 105 NKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 164
Query: 128 KFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K ++D NT FV Y + E+A A++ +NG+ +G +R ++ +P +E+ P+
Sbjct: 165 KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEK-PSH 223
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ N +Y + Q+S G N ++VG S+ DE +
Sbjct: 224 Y----------------NEKSYDEIYNQTS-GDNTS------VYVGNIASLTEDE--IRQ 258
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
FG I ++ + + Y+FV+F + D A +A
Sbjct: 259 GFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 291
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 30/177 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
++VG+LS++ + L+E F FG + T S+ + FV + + E+A+ A + +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 77 QGSDFRGNPIKIEFA--RPA---KPSKH------------------LWVGGISQTVSKEE 113
G I+ +A +P KPS + ++VG I+ +++++E
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDE 255
Query: 114 LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ +GF FG I + + K AFV++ + AA+A+ +N + +GG+ +R + ++
Sbjct: 256 IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 312
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 47 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 105
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 106 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 165
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 166 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 224
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 225 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 282
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 283 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 341
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 342 IASLNGYRLGDRVLQVSFKTNK 363
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDAL 76
L+ GNL + A L + ++ + + V T SR FAFV V+D + L
Sbjct: 126 LYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFAFVTMTTVQDCELVIKNL 185
Query: 77 QGSDFRGNPIKIEFARPAKP-------SKH-LWVGGISQTVSKEELEEGFLKFGNIEDFK 128
GS + G +K+ FA KP ++H L+VG +S TV+ E L E F + GN+ +
Sbjct: 186 DGSLYGGRTMKVNFADRPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEAFGRCGNVVGAR 245
Query: 129 FLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
L DG T FV YS E+ EA+ ++NG ++ G ++RV+
Sbjct: 246 VLYDGETGRSRGYGFVCYSTKEEMDEAISSLNGTELEGREIRVNL 290
>gi|451849890|gb|EMD63193.1| hypothetical protein COCSADRAFT_38066 [Cochliobolus sativus ND90Pr]
Length = 326
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 27/199 (13%)
Query: 10 RAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFK 64
R K P + L++GNL + T LK +F +FG ++ + SR FA+V +K
Sbjct: 125 RERTSKNIEPHNVLYIGNLYYEVTPDQLKRVFSRFGDIESIKIVYDNRGLSRGFAYVEYK 184
Query: 65 RVEDAKAAKDALQGSDFRGNPIKIEF----ARPAK-----------PSKHLWVGGISQTV 109
V DA+AA D L F G + ++F +PAK PSK L++G +S +
Sbjct: 185 NVSDAQAAIDNLDMQVFEGRNLVVQFHAPKYQPAKGRGPNGNEPNPPSKTLFIGNMSFEM 244
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQL 163
S ++L + F N+ D + D T A ++ + A A + + + I G QL
Sbjct: 245 SDKDLNDLFRDIRNVLDVRVAIDRRTGQPRGFAHADFIDVASATRAREVLKEKVIYGRQL 304
Query: 164 RVDFLRSQP-SRREQWPNS 181
RVDF +S P ++RE+ +S
Sbjct: 305 RVDFSKSSPQTQREKRQDS 323
>gi|410902665|ref|XP_003964814.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 151/337 (44%), Gaps = 51/337 (15%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR 56
P N + DD + +NL V L + T + K LFG G + DK+T S
Sbjct: 25 PVISTNGSTDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSL 79
Query: 57 SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEE 113
+ FV + DA A + L G + IK+ +ARP+ S +L+V G+ +T+S+++
Sbjct: 80 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKD 139
Query: 114 LEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRV 165
+E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 140 MEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITV 199
Query: 166 DFLRSQPSRR-------EQWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHP----- 208
F + PS++ + + + GP+ + F DN +++Y KR P
Sbjct: 200 KF-ANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKRFSPITIDS 258
Query: 209 -QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRN 259
S G N GP ++V Y S + DE +L FG + +K + +
Sbjct: 259 MTSLAGVNLTGPTGAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG 317
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 318 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 354
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 274
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 275 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 333
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 334 IASLNGYRLGDRVLQVSFKTNK 355
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 274
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 275 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 333
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 334 IASLNGYRLGDRVLQVSFKTNK 355
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 126/318 (39%), Gaps = 64/318 (20%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGAL------------DKVTTY---------- 53
E S L+VGNLS D T+ + +LF + G D++ +
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWL 62
Query: 54 ------SSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HL 100
SS + FV F +DA +A+ + G +K+ +A K H+
Sbjct: 63 CCLQHTSSDPYCFVEFVDHKDAASARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHV 122
Query: 101 WVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNIN 154
+VG +S ++ E++ F FG+I D + LKD T FV + DA A+ +
Sbjct: 123 FVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMA 182
Query: 155 GRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR 214
G+ + G Q+R ++ +P P S F DN S H +
Sbjct: 183 GQWLQGRQIRTNWATRKPPA----PKS--------------FQDNGS----KHLKFDDIV 220
Query: 215 NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
+ P + ++ G S + E ++ FG+I I+ +P + YSFV F S D A A
Sbjct: 221 TQSSPHNCTVYCGGIQS-GLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHA 279
Query: 275 KEGLQGRLFNDPRITIMF 292
+ G + + +
Sbjct: 280 IVSVNGTVIEGNLVKCFW 297
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVED 68
K+ +++VG+LS D T D++ F FG L + T S+ + FV F D
Sbjct: 114 KDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLD 173
Query: 69 AKAAKDALQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVG 103
A+ A + G +G I+ +A +P P SKHL + G
Sbjct: 174 AENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYCG 233
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQL 163
GI +++ +++ F FG I + + D +FV +S + AA A+ ++NG I G +
Sbjct: 234 GIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLV 293
Query: 164 RVDFLRSQPSRRE 176
+ + + P ++
Sbjct: 294 KCFWGKESPDMQK 306
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 147/328 (44%), Gaps = 51/328 (15%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVE 67
K +NL V L + T +LK LFG G + DK+T S + FV + +
Sbjct: 33 KTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPK 91
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNI 124
DA+ A + L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I
Sbjct: 92 DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI 151
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE 176
+ L D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 152 ITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKT 210
Query: 177 ---------QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNR 216
Q PN GP+ + F DN + AY KR P S G N
Sbjct: 211 NQAILSQLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINI 268
Query: 217 DGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSV 268
G P ++V Y + DE +L FG + +K + + + FV +
Sbjct: 269 PGHPGTGWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 327
Query: 269 DEARRAKEGLQGRLFNDPRITIMFSSSE 296
DEA A L G D + + F +++
Sbjct: 328 DEAAMAIASLNGYRLGDRVLQVSFKTNK 355
>gi|348509181|ref|XP_003442130.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oreochromis
niloticus]
gi|410902663|ref|XP_003964813.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Takifugu rubripes]
gi|432868072|ref|XP_004071397.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oryzias latipes]
Length = 345
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 42/326 (12%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR 56
P N + DD + +NL V L + T + K LFG G + DK+T S
Sbjct: 25 PVISTNGSTDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSL 79
Query: 57 SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEE 113
+ FV + DA A + L G + IK+ +ARP+ S +L+V G+ +T+S+++
Sbjct: 80 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKD 139
Query: 114 LEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRV 165
+E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 140 MEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITV 199
Query: 166 DFLRSQPSRR-------EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDG 218
F + PS++ + + + GP+ + F S S G N G
Sbjct: 200 KF-ANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRF--RFSPITIDSMTSLAGVNLTG 256
Query: 219 PPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDE 270
P ++V Y S + DE +L FG + +K + + + FV + DE
Sbjct: 257 PTGAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDE 315
Query: 271 ARRAKEGLQGRLFNDPRITIMFSSSE 296
A A L G D + + F +S+
Sbjct: 316 AAMAIASLNGYRLGDRVLQVSFKTSK 341
>gi|405960114|gb|EKC26061.1| Ankyrin repeat and SOCS box protein 8 [Crassostrea gigas]
Length = 1029
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVE 67
DDK + L+VGNL + TD +LK++F K+G L+++ ++AF+ F ++
Sbjct: 248 DDK---ATRTLFVGNLDYNITDEELKDVFEKYGFLEEIDIKRPQRGQGNAYAFIKFMNLD 304
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A AK + G KI + + PS +WVGG+ V+ + LE F +FG IE
Sbjct: 305 YAHRAKVEMSGQYIGRFQCKIGYGK-VTPSTCIWVGGLGPWVTHQMLEREFDRFGIIERI 363
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGE--QLRVDF 167
++ + + A+V Y ++ A A + G +GG+ +LR+DF
Sbjct: 364 EWPQSKSYAYVLYDNIDAAQAACSEMRGAPLGGQDRRLRIDF 405
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-----RSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ TTD DLK +FG+FG + + F FV F+ +DA A ++
Sbjct: 219 TNVYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGEGKPKGFGFVNFENADDAAKAVES 278
Query: 76 LQGSDF---------------RGNPIKIEFARPAKP------SKHLWVGGISQTVSKEEL 114
L G F R +K+++ + K S +L+V + +VS E+L
Sbjct: 279 LNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSSNLYVKNLDDSVSDEKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +G + K ++D N + FV +S E+A +A+ ++G+ I + L V +
Sbjct: 339 KELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSEMSGKMIENKPLYVAVAQ 398
Query: 170 SQPSRR 175
+ RR
Sbjct: 399 RKEDRR 404
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 70/292 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TD+ L + F + G + V T S + +V F +DA A
Sbjct: 39 TTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAI 98
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
L G P+++ ++ PS ++++ + +++ + L + F FGNI
Sbjct: 99 QELNYIPLNGKPVRVMYSH-RDPSVRRSGAGNIFIKNLDKSIDHKALHDTFSVFGNIISC 157
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D + FV+Y E A +A+ +NG + +Q+ V FLR Q
Sbjct: 158 KVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYVGPFLRRQ---------- 207
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
RD G T F++ Y ++ +S+ + L N
Sbjct: 208 --ERDS--TGNKTIFTN---VYVKNLAESTTDDD-----------------------LKN 237
Query: 242 AMILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+FGE +I S + + FV F + D+A +A E L G+ F+D
Sbjct: 238 ---IFGEFGKITSAVVMKDGEGKPKGFGFVNFENADDAAKAVESLNGKTFDD 286
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKD 74
SSNL+V NL +D LKELF +G + SR FV F E+A A
Sbjct: 321 SSNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMS 380
Query: 75 ALQGSDFRGNPIKIEFAR 92
+ G P+ + A+
Sbjct: 381 EMSGKMIENKPLYVAVAQ 398
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 44/260 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 128
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 129 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S ++ P + ++ G S + EQ++
Sbjct: 180 ---------------STYESNTKQLSYDEVVSQSSPNNCTVYCGGVTS-GLTEQLMRQTF 223
Query: 244 ILFGEIERIKSYPSRNYSFV 263
FG+I I+ +P + YSFV
Sbjct: 224 SPFGQIMEIRVFPDKGYSFV 243
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 31/148 (20%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 156 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLT 215
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFV 138
++ + + F FG I + + D +FV
Sbjct: 216 EQLMRQTFSPFGQIMEIRVFPDKGYSFV 243
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 274
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 275 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 333
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 334 IRSLNGYRLGDRVLQVSFKTNK 355
>gi|417414192|gb|JAA53395.1| Putative msx2-interacting protein spen log transcriptional
regulator, partial [Desmodus rotundus]
Length = 3664
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + + +AF+ + + A +
Sbjct: 412 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKANGVPQYAFLQYCDIASVCKAIKKM 471
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 472 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSANVSDQYLTRHFCRYGPVIKVVFDRLKGMA 530
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ Y+ +E A A+K GR+IGG +++VDF
Sbjct: 531 LIIYNEIEYAQTAVKETKGRKIGGNKIKVDF 561
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 42/209 (20%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL +TD LK+ LF +F KVT+ S + V+F++ ED + A A
Sbjct: 312 IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEERYGLVFFRQQEDQEKALTAS 371
Query: 77 QGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGISQTVSKEELE 115
+G F G I++ EF RP K ++ L++G + +T + +L
Sbjct: 372 KGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKATRTLFIGNLEKTTTYHDLR 430
Query: 116 EGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
F +FG I D K AF++Y + +A+K ++G +G +L++ F +S P
Sbjct: 431 NIFQRFGEIVDIDIKKANGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMP 490
Query: 173 SR-----------REQWPNSHDARDGPII 190
+ +Q+ H R GP+I
Sbjct: 491 TNCVWLDGLSANVSDQYLTRHFCRYGPVI 519
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LSA+ +D L F ++G + KV + A + + +E A+ A +G
Sbjct: 490 PTNCVWLDGLSANVSDQYLTRHFCRYGPVIKVVFDRLKGMALIIYNEIEYAQTAVKETKG 549
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 550 RKIGGNKIKVDFA 562
>gi|18463972|gb|AAL73053.1| HUC [Sphoeroides nephelus]
Length = 356
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 151/337 (44%), Gaps = 51/337 (15%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR 56
P N + DD + +NL V L + T + K LFG G + DK+T S
Sbjct: 23 PVISTNGSTDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSL 77
Query: 57 SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEE 113
+ FV + DA A + L G + IK+ +ARP+ S +L+V G+ +T+S+++
Sbjct: 78 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKD 137
Query: 114 LEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRV 165
+E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 138 MEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITV 197
Query: 166 DFLRSQPSRR-------EQWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHP----- 208
F + PS++ + + + GP+ + F DN +++Y KR P
Sbjct: 198 KF-ANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNASYGVKRFSPITIDS 256
Query: 209 -QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRN 259
S G N GP ++V Y S + DE +L FG + +K + +
Sbjct: 257 MTSLAGVNLTGPTGAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG 315
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 316 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 352
>gi|302811197|ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
gi|302815025|ref|XP_002989195.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300143095|gb|EFJ09789.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300144923|gb|EFJ11603.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
Length = 567
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 43/217 (19%)
Query: 3 PPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRS 57
PP SKFN N++V NLS TTD DL++LFG FG + S+
Sbjct: 186 PPASKFN------------NVFVKNLSEITTDEDLQKLFGVFGPISSAVVMKEVDGKSKC 233
Query: 58 FAFVYFKRVEDAKAAKDALQGSDF---------------RGNPIKIEFARPAKPSK---- 98
F FV F+ EDA A + L G+ F R +K +F K ++
Sbjct: 234 FGFVNFENPEDAVKAVEDLHGTTFQDKELYVSRAQKKNEREAELKAKFEHERKDTEDKSP 293
Query: 99 -HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKN 152
+L++ + + E+L++ F FGN+ K ++D + FV +S + A A+
Sbjct: 294 TNLYLKNLDDGIDDEKLKDMFSAFGNVTSCKVMRDPLGHSKGSGFVAFSTSDAALRAVAQ 353
Query: 153 INGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPI 189
+NG+ IG + L V + + R+ + +R GP+
Sbjct: 354 MNGKMIGSKPLYVAMAQKKEERKAKLEAQFASR-GPV 389
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 114/294 (38%), Gaps = 66/294 (22%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
S+ L+VG+L +A + ++F + G + V T S +A+V + +DA A
Sbjct: 14 STALYVGDLDPSVNEAQIFDIFKQIGNVMSVRLCRDMVTKRSLGYAYVNYNNTQDASRAI 73
Query: 74 DALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L G P++I F+ S +L+V + +++ + L + F +G I K
Sbjct: 74 EELNFMPVNGKPVRIMFSYRDPSIRKSGSGNLFVKNLDKSIDNKALHDLFSPYGKILSCK 133
Query: 129 FLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHD 183
D + FV++ + A A++ ING + +QL V
Sbjct: 134 IALDVSNVSKGHGFVQFDTEDAAHTAIEKINGTTLHDKQLFV------------------ 175
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKI--LWVGYPPSVQMDEQMLHN 241
GP + R + RD P SK ++V + DE L
Sbjct: 176 ---GPFVRR---------------------QERDPPASKFNNVFVKNLSEITTDED-LQK 210
Query: 242 AMILFGEIERIKSY-----PSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
+FG I S+ + FV F + ++A +A E L G F D + +
Sbjct: 211 LFGVFGPISSAVVMKEVDGKSKCFGFVNFENPEDAVKAVEDLHGTTFQDKELYV 264
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 44/260 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 17 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 76
Query: 79 SDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
G +K+ +A K H++VG +S ++ E+++ F FG I D + +K
Sbjct: 77 RKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVK 136
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 137 DMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK--------- 187
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
S Y+ + Q S ++ P + ++ G S + EQ++
Sbjct: 188 ---------------STYESNTKQLSYDEVVSQSSPNNCTVYCGGVTS-GLTEQLMRQTF 231
Query: 244 ILFGEIERIKSYPSRNYSFV 263
FG+I I+ +P + YSFV
Sbjct: 232 SPFGQIMEIRVFPDKGYSFV 251
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 31/148 (20%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 104 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 163
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 164 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLT 223
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFV 138
++ + + F FG I + + D +FV
Sbjct: 224 EQLMRQTFSPFGQIMEIRVFPDKGYSFV 251
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 274
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 275 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 333
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 334 IASLNGYRLGDRVLQVSFKTNK 355
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 126
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 127 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 186
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 187 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 245
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 246 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 303
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 304 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 362
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 363 IASLNGYRLGDRVLQVSFKTNK 384
>gi|417414186|gb|JAA53392.1| Putative msx2-interacting protein spen log transcriptional
regulator, partial [Desmodus rotundus]
Length = 3397
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDALQG 78
L++GNL TT DL+ +F +FG + + + +AF+ + + A + G
Sbjct: 147 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKANGVPQYAFLQYCDIASVCKAIKKMDG 206
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A +
Sbjct: 207 EYLGNNRLKLGFGK-SMPTNCVWLDGLSANVSDQYLTRHFCRYGPVIKVVFDRLKGMALI 265
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
Y+ +E A A+K GR+IGG +++VDF
Sbjct: 266 IYNEIEYAQTAVKETKGRKIGGNKIKVDF 294
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 42/209 (20%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL +TD LK+ LF +F KVT+ S + V+F++ ED + A A
Sbjct: 45 IKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEERYGLVFFRQQEDQEKALTAS 104
Query: 77 QGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGISQTVSKEELE 115
+G F G I++ EF RP K ++ L++G + +T + +L
Sbjct: 105 KGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKATRTLFIGNLEKTTTYHDLR 163
Query: 116 EGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
F +FG I D K AF++Y + +A+K ++G +G +L++ F +S P
Sbjct: 164 NIFQRFGEIVDIDIKKANGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMP 223
Query: 173 SR-----------REQWPNSHDARDGPII 190
+ +Q+ H R GP+I
Sbjct: 224 TNCVWLDGLSANVSDQYLTRHFCRYGPVI 252
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LSA+ +D L F ++G + KV + A + + +E A+ A +G
Sbjct: 223 PTNCVWLDGLSANVSDQYLTRHFCRYGPVIKVVFDRLKGMALIIYNEIEYAQTAVKETKG 282
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 283 RKIGGNKIKVDFA 295
>gi|118484218|gb|ABK93989.1| unknown [Populus trichocarpa]
Length = 149
Score = 80.5 bits (197), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 49/75 (65%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNLS + DL + F +FG LD V RS+AFV F + EDA AA +LQ
Sbjct: 39 PPSRHLWVGNLSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAIKSLQ 98
Query: 78 GSDFRGNPIKIEFAR 92
G GNP++IEFA+
Sbjct: 99 GYPLAGNPLRIEFAK 113
Score = 67.4 bits (163), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 50/75 (66%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG +S ++ + +L + FL+FG+++ F + AFV +++ EDA A+K++ G
Sbjct: 40 PSRHLWVGNLSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAIKSLQG 99
Query: 156 RQIGGEQLRVDFLRS 170
+ G LR++F ++
Sbjct: 100 YPLAGNPLRIEFAKA 114
Score = 48.9 bits (115), Expect = 0.014, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 205 RSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVE 264
R +S G+ + PPS+ LWVG S ++E L + + FG+++ + P R+Y+FV
Sbjct: 25 RFESSNSNGKRGNNPPSRHLWVG-NLSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVN 83
Query: 265 FRSVDEARRAKEGLQG 280
F ++A A + LQG
Sbjct: 84 FNKEEDAIAAIKSLQG 99
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ T++ DLK +FG+FG + V S+ F FV F+ +DA + +A
Sbjct: 208 NNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEA 267
Query: 76 LQGSDFRGN---------------PIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G G +K F + K + +L+V + ++ ++L
Sbjct: 268 LNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKL 327
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG I K ++D N + FV +S E+AA AL +NGR I + L V +
Sbjct: 328 KELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQ 387
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 388 RKEDRRARL 396
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TD+ L +LF + G + V T+ S + +V + DA A
Sbjct: 28 TTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRAL 87
Query: 74 DALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
D L + GNPI++ ++ S ++++ + + + + L + F FG+I K
Sbjct: 88 DVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCK 147
Query: 129 FLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D + FV++ E A +A++ +NG + +Q+ V FLR Q
Sbjct: 148 VATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSEKTKF 207
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+ + T D + + P +SV RDG
Sbjct: 208 NNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGK--------------------- 246
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGR 281
S+ + FV F + D+A R+ E L G+
Sbjct: 247 --------------SKCFGFVNFENADDAARSVEALNGK 271
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 51/288 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKD 74
S N+++ NL L + F FG++ KV T SS + F FV F E A A +
Sbjct: 116 SGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIE 175
Query: 75 ALQGSDFRGNPI-------KIEFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + K E ++ +K +++V +++T S+E+L+ F +FG I
Sbjct: 176 KLNGMLLNDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPIT 235
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++DG FV + +DAA +++ +NG+++ G++ W
Sbjct: 236 SVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKE---------------W-- 278
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
+G+ S+ K S + SV D L+V +D+ L
Sbjct: 279 --------YVGKAQKKSEREVELK-SRFEQSVKEAADKYQGANLYVKNLDD-SIDDDKLK 328
Query: 241 NAMILFGEIERIKSYP-----SRNYSFVEFRSVDEARRAKEGLQGRLF 283
FG I K SR FV F S +EA RA + GR+
Sbjct: 329 ELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMI 376
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ TT+ DLKE+FGKFG + V S+ F FV F+ ++A A
Sbjct: 304 NNVYVKNLAETTTEDDLKEIFGKFGTITSVVVMRDGDGRSKCFGFVNFESPDEAALAVQD 363
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R +K +F + + + +L++ + TV E+L
Sbjct: 364 LNGKKFSDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDTVDDEKL 423
Query: 115 EEGFLKFGNIEDFKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +FG I K ++D N A FV + +DA+ AL +N + +G + L V +
Sbjct: 424 RELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYVALAQ 483
Query: 170 SQPSRR 175
+ R+
Sbjct: 484 RKEDRK 489
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 117/286 (40%), Gaps = 56/286 (19%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L DA L ++F + G + VT+ S +A+V + DA A
Sbjct: 123 PATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARA 182
Query: 73 KDALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + G PI+I ++ + ++++ + +++ + L + F FGNI
Sbjct: 183 LEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALHDTFCVFGNILSC 242
Query: 128 KFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D FV+Y R E A A++ +NG + +++ V F+R Q R+ P S
Sbjct: 243 KVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQ--ERDNSPGS 300
Query: 182 HDARDGPI--IGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQML 239
+ + + T D + + +SV RDG
Sbjct: 301 VKFNNVYVKNLAETTTEDDLKEIFGKFGTITSVVVMRDGDGR------------------ 342
Query: 240 HNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
S+ + FV F S DEA A + L G+ F+D
Sbjct: 343 -----------------SKCFGFVNFESPDEAALAVQDLNGKKFSD 371
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAK 73
++ L+ GNL + A L + +G + V T SR FAFV VED A
Sbjct: 112 NTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVI 171
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK--------HLWVGGISQTVSKEELEEGFLKFGNIE 125
+ L GS F G +++ F+ KP + L+VG +S +V+ E L E F ++GNI
Sbjct: 172 ENLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIV 231
Query: 126 DFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
+ L DG T FV Y+ + AL ++NG ++ G +RV + + S
Sbjct: 232 GARVLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQGKKS 285
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 125
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 126 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 185
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 186 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 244
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 245 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 302
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 303 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 361
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 362 IASLNGYRLGDRVLQVSFKTNK 383
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS T + +L+++FG+FGA+ V SR F FV F+ EDA A +A
Sbjct: 206 TNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEA 265
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G R +K F + AK + +L++ + ++S E+L
Sbjct: 266 LNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNLDDSISDEKL 325
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +G I K ++D + FV +S E+A+ AL +NG+ + + L V +
Sbjct: 326 KELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPLYVALAQ 385
Query: 170 SQPSRR 175
+ RR
Sbjct: 386 RKEERR 391
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 110/284 (38%), Gaps = 66/284 (23%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKD 74
++L+VG+L + TD+ L +LF + G + V T+ S + +V + +DA A +
Sbjct: 27 TSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALE 86
Query: 75 ALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L + G PI+I ++ + ++++ + + + + L + F FGNI K
Sbjct: 87 VLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKV 146
Query: 130 LKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDA 184
D + FV+Y E A +A++ +NG + +Q+ V
Sbjct: 147 AVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYV------------------- 187
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
GP + R H RD K + + +
Sbjct: 188 --GPFV--------------RKH-------ERDMAVDKTRFTNVFVKNLSESTLEEELRK 224
Query: 245 LFGEIERIKSYP--------SRNYSFVEFRSVDEARRAKEGLQG 280
+FGE I S SR + FV F + ++A RA E L G
Sbjct: 225 IFGEFGAITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNG 268
>gi|440911744|gb|ELR61381.1| Msx2-interacting protein, partial [Bos grunniens mutus]
Length = 3626
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 412 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 471
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 472 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 530
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 531 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 561
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + D E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 293 PTSQLLSSLDKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 352
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 353 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 411
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 412 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 471
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 472 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 519
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 490 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 549
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 550 RKIGGNKIKVDFA 562
>gi|354498410|ref|XP_003511308.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein-like
[Cricetulus griseus]
Length = 3715
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 536 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 595
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 596 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 654
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 655 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 685
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 417 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 476
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 477 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 535
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 536 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 595
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 596 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 643
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 614 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 673
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 674 RKIGGNKIKVDFA 686
>gi|426240459|ref|XP_004014118.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein [Ovis
aries]
Length = 3628
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 429 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 488
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 489 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 547
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 548 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 578
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + D E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 310 PTSQLLSSLDKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 369
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 370 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 428
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 429 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 488
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 489 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 536
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 507 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 566
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 567 RKIGGNKIKVDFA 579
>gi|410053240|ref|XP_003316137.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Pan
troglodytes]
Length = 447
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 45/315 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S FV
Sbjct: 147 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGVSL-GXRFV 201
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ + A A + LQG + I++ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 202 KYSDPKKADKAINTLQGLKLQTKTIQVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 261
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 262 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAESITVKFANN 321
Query: 171 QPSRREQW--PNSHDARDGPIIGRG-TGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
Q RR P S AR PI G +G + + + +
Sbjct: 322 QVRRRAALLTPLSLIARFSPIAIDGMSGLAGVGLSGGAAGAGWCI-------------FV 368
Query: 228 YPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGR 281
Y S + DE +L FG + +K + + + FV + DEA A L G
Sbjct: 369 YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGY 428
Query: 282 LFNDPRITIMFSSSE 296
+ + + F +S+
Sbjct: 429 RLGERVLQVSFKTSK 443
>gi|149024496|gb|EDL80993.1| rCG30673 [Rattus norvegicus]
Length = 3563
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 369 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 428
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 429 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGLA 487
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +E A A++ GR+IGG +++VDF
Sbjct: 488 LVLYSEIEYAQAAVRETKGRKIGGNKIKVDF 518
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 250 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 309
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 310 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKA 368
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 369 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 428
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 429 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 476
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 447 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGLALVLYSEIEYAQAAVRETKG 506
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 507 RKIGGNKIKVDFA 519
>gi|427795303|gb|JAA63103.1| Putative msx2-interacting protein, partial [Rhipicephalus
pulchellus]
Length = 4690
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L++GNL D T +L++ F +FG + ++ S+ S+AF+ + + A L G
Sbjct: 405 TLFIGNLEKDITTTELRKHFDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDG 464
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
+ N IK+ F + + P+ +W+ G+++ VS + L F ++G + ++ A V
Sbjct: 465 ENLGANRIKLGFGK-SMPTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALV 523
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ LE A A+ + GR +GG++L+VDF
Sbjct: 524 YFDSLECAQHAVAEMRGRVLGGKKLQVDF 552
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 28/179 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAA---- 72
+ V NL +TD LK+ LF ++ KVT + +A V FK+ ED + A
Sbjct: 304 ICVRNLPVRSTDTSLKDGLFHEYKKHGKVTVVKVIGQGTERYAVVCFKKPEDVEKALEVS 363
Query: 73 --------------KDALQGSDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEG 117
+ L G D P++ E K ++ L++G + + ++ EL +
Sbjct: 364 KDKLFFGCKIEVTSHEGLDGEDNEFRPLEAELDEYHPKATRTLFIGNLEKDITTTELRKH 423
Query: 118 FLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F +FG+I + K G+ AF++Y+ + +A++ ++G +G ++++ F +S P+
Sbjct: 424 FDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDGENLGANRIKLGFGKSMPT 482
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ +W+ ++ +D L FG++G + R A VYF +E A+ A ++G
Sbjct: 481 PTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALVYFDSLECAQHAVAEMRG 540
Query: 79 SDFRGNPIKIEFA-RPAKPSKHLWVGGISQTVSKEELEEGFL----KFGNIEDFKFLKDG 133
G ++++FA R + + + Q + + + EG +F I D +F +DG
Sbjct: 541 RVLGGKKLQVDFASRECQSAFFDKIEMSGQVLQNDRIWEGRRERRQEFDVIRDERFARDG 600
Query: 134 NTAFVE---YSRLE 144
+ YSR E
Sbjct: 601 RGVAFDGRGYSRYE 614
>gi|407339771|ref|NP_001258424.1| uncharacterized protein LOC690911 [Rattus norvegicus]
Length = 3611
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGLA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +E A A++ GR+IGG +++VDF
Sbjct: 556 LVLYSEIEYAQAAVRETKGRKIGGNKIKVDF 586
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGLALVLYSEIEYAQAAVRETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|427793103|gb|JAA62003.1| Putative msx2-interacting protein, partial [Rhipicephalus
pulchellus]
Length = 4688
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L++GNL D T +L++ F +FG + ++ S+ S+AF+ + + A L G
Sbjct: 403 TLFIGNLEKDITTTELRKHFDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDG 462
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
+ N IK+ F + + P+ +W+ G+++ VS + L F ++G + ++ A V
Sbjct: 463 ENLGANRIKLGFGK-SMPTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALV 521
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ LE A A+ + GR +GG++L+VDF
Sbjct: 522 YFDSLECAQHAVAEMRGRVLGGKKLQVDF 550
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 28/179 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAA---- 72
+ V NL +TD LK+ LF ++ KVT + +A V FK+ ED + A
Sbjct: 302 ICVRNLPVRSTDTSLKDGLFHEYKKHGKVTVVKVIGQGTERYAVVCFKKPEDVEKALEVS 361
Query: 73 --------------KDALQGSDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEG 117
+ L G D P++ E K ++ L++G + + ++ EL +
Sbjct: 362 KDKLFFGCKIEVTSHEGLDGEDNEFRPLEAELDEYHPKATRTLFIGNLEKDITTTELRKH 421
Query: 118 FLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F +FG+I + K G+ AF++Y+ + +A++ ++G +G ++++ F +S P+
Sbjct: 422 FDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDGENLGANRIKLGFGKSMPT 480
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ +W+ ++ +D L FG++G + R A VYF +E A+ A ++G
Sbjct: 479 PTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALVYFDSLECAQHAVAEMRG 538
Query: 79 SDFRGNPIKIEFA-RPAKPSKHLWVGGISQTVSKEELEEGFL----KFGNIEDFKFLKDG 133
G ++++FA R + + + Q + + + EG +F I D +F +DG
Sbjct: 539 RVLGGKKLQVDFASRECQSAFFDKIEMSGQVLQNDRIWEGRRERRQEFDVIRDERFARDG 598
Query: 134 NTAFVE---YSRLE 144
+ YSR E
Sbjct: 599 RGVAFDGRGYSRYE 612
>gi|347446711|ref|NP_001231530.1| ELAV-like protein 4 isoform 2 [Danio rerio]
Length = 398
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 60/345 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 60 CPSPMQTGGSNDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 114
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 115 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 174
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT---------AFVEYSRLEDAAEALKNINGRQIGG-- 160
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G
Sbjct: 175 KELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAA 234
Query: 161 EQLRVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKR 205
E + V F L P+RR P H A+ R + KR
Sbjct: 235 EPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKR 290
Query: 206 SHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK---- 253
P S VG N G ++V Y S DE +L FG + +K
Sbjct: 291 FSPITIDSMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRD 349
Query: 254 --SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + + FV + DEA A L G D + + F +++
Sbjct: 350 FNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 394
>gi|392348489|ref|XP_002729608.2| PREDICTED: msx2-interacting protein [Rattus norvegicus]
Length = 3642
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 467 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 526
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 527 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGLA 585
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V YS +E A A++ GR+IGG +++VDF
Sbjct: 586 LVLYSEIEYAQAAVRETKGRKIGGNKIKVDF 616
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 348 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 407
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 408 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWVGPETESENEF-RPLDERIDEFHPKA 466
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 467 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 526
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 527 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 574
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 545 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGLALVLYSEIEYAQAAVRETKG 604
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 605 RKIGGNKIKVDFA 617
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT+ DLK++FG+FG + S+ F FV F +DA + +A
Sbjct: 219 NNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFDDPDDAARSVEA 278
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G F R +K +F + K + +L+V + ++S ++L
Sbjct: 279 LNGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGLNLYVKNLDDSISDDKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +FG I K ++D N + FV +S E+A++AL +NG+ + + L V +
Sbjct: 339 KELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMNGKMVVSKPLYVALAQ 398
Query: 170 SQPSRR 175
+ RR
Sbjct: 399 RKEERR 404
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 64/289 (22%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
S++L+VG+L D+ L +LF + G + V +T S + +V + +A A
Sbjct: 39 STSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEATRAL 98
Query: 74 DALQGSDFRGNPIKIEFA-RPAKPSK----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
D L + G PI+I ++ R K ++++ + +++ + L + F FGNI K
Sbjct: 99 DELNFTPLNGKPIRIMYSYRDPTIRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCK 158
Query: 129 FLKDG-----NTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D FV++ E A A+ +NG + +Q+ V FLR Q E+ +
Sbjct: 159 VATDSLGQSRGYGFVQFDNEESAKSAIDKLNGMLLNDKQVFVGPFLRKQ----ERESTAD 214
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQ------SSVGRNRDGPPSKILWVGYPPSVQMDE 236
R + + + K+ + ++V R+ DG
Sbjct: 215 KTRFNNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADG------------------ 256
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
S+ + FV F D+A R+ E L G+ F+D
Sbjct: 257 -------------------KSKCFGFVNFDDPDDAARSVEALNGKKFDD 286
>gi|301772092|ref|XP_002921461.1| PREDICTED: msx2-interacting protein-like [Ailuropoda melanoleuca]
Length = 3673
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFSRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|431906293|gb|ELK10490.1| Msx2-interacting protein [Pteropus alecto]
Length = 3622
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDALQG 78
L++GNL TT DL+ +F +FG + + +AF+ + + A + G
Sbjct: 371 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDG 430
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A V
Sbjct: 431 EYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALV 489
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
Y+ +E A A+K GR+IGG +++VDF
Sbjct: 490 LYNEIEYAQTAVKETKGRKIGGNKIKVDF 518
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 250 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 309
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 310 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 368
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 369 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 428
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 429 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 476
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+ A +G
Sbjct: 447 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQTAVKETKG 506
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 507 RKIGGNKIKVDFA 519
>gi|297484241|ref|XP_002694185.1| PREDICTED: msx2-interacting protein [Bos taurus]
gi|296479096|tpg|DAA21211.1| TPA: spen homolog, transcriptional regulator [Bos taurus]
Length = 3652
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + D E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLDKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|119908535|ref|XP_591419.3| PREDICTED: msx2-interacting protein [Bos taurus]
Length = 3652
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + D E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLDKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|427796493|gb|JAA63698.1| Putative msx2-interacting protein, partial [Rhipicephalus
pulchellus]
Length = 4645
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L++GNL D T +L++ F +FG + ++ S+ S+AF+ + + A L G
Sbjct: 360 TLFIGNLEKDITTTELRKHFDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDG 419
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
+ N IK+ F + + P+ +W+ G+++ VS + L F ++G + ++ A V
Sbjct: 420 ENLGANRIKLGFGK-SMPTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALV 478
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ LE A A+ + GR +GG++L+VDF
Sbjct: 479 YFDSLECAQHAVAEMRGRVLGGKKLQVDF 507
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 28/179 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAA---- 72
+ V NL +TD LK+ LF ++ KVT + +A V FK+ ED + A
Sbjct: 259 ICVRNLPVRSTDTSLKDGLFHEYKKHGKVTVVKVIGQGTERYAVVCFKKPEDVEKALEVS 318
Query: 73 --------------KDALQGSDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEG 117
+ L G D P++ E K ++ L++G + + ++ EL +
Sbjct: 319 KDKLFFGCKIEVTSHEGLDGEDNEFRPLEAELDEYHPKATRTLFIGNLEKDITTTELRKH 378
Query: 118 FLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F +FG+I + K G+ AF++Y+ + +A++ ++G +G ++++ F +S P+
Sbjct: 379 FDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDGENLGANRIKLGFGKSMPT 437
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ +W+ ++ +D L FG++G + R A VYF +E A+ A ++G
Sbjct: 436 PTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALVYFDSLECAQHAVAEMRG 495
Query: 79 SDFRGNPIKIEFA-RPAKPSKHLWVGGISQTVSKEELEEGFL----KFGNIEDFKFLKDG 133
G ++++FA R + + + Q + + + EG +F I D +F +DG
Sbjct: 496 RVLGGKKLQVDFASRECQSAFFDKIEMSGQVLQNDRIWEGRRERRQEFDVIRDERFARDG 555
Query: 134 NTAFVE---YSRLE 144
+ YSR E
Sbjct: 556 RGVAFDGRGYSRYE 569
>gi|148236291|ref|NP_001081613.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus laevis]
gi|728726|emb|CAA59430.1| Xel-1 [Xenopus laevis]
Length = 389
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 142/337 (42%), Gaps = 51/337 (15%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRS 57
P + N D K +NL V L + T +LK LFG G + DK+T S
Sbjct: 55 PVESNNTEDSK-----TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLG 109
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEEL 114
+ FV + +DA+ A + + G + IK+ +ARP+ S +L+V G+ +T++++EL
Sbjct: 110 YGFVNYIDPKDAEKAINTVNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKEL 169
Query: 115 EEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVD 166
E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 170 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVK 229
Query: 167 F---------------LRSQPSRREQWPNSHDAR----DGPIIGRGTGFSDNHSAYKRSH 207
F L P+RR P + A+ D + G S
Sbjct: 230 FANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGGIKSRFSPMAIDG 289
Query: 208 PQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRN 259
S G N G ++V Y + DE +L FG + +K + +
Sbjct: 290 MTSLAGINFPGHAGTGWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG 348
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 349 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 385
>gi|18858615|ref|NP_571524.1| ELAV-like protein 3 [Danio rerio]
gi|1683635|gb|AAB36515.1| zHuC [Danio rerio]
Length = 345
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 42/326 (12%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR 56
P N A DD + +NL V L + T + K LFG G + DK+T S
Sbjct: 25 PVISTNGATDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSL 79
Query: 57 SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEE 113
+ FV + DA A + L G + IK+ +ARP+ S +L+V G+ +T+S+++
Sbjct: 80 GYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKD 139
Query: 114 LEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRV 165
+E+ F ++G I + L + T F+ + + +A EA+K +NG++ G E + V
Sbjct: 140 MEQLFSQYGRIITSRILVNQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITV 199
Query: 166 DFLRSQPSRR-------EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDG 218
F + PS++ + + + GP+ + F S S G N G
Sbjct: 200 KF-ANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRF--RFSPITIDSMTSLAGVNLTG 256
Query: 219 PPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDE 270
P ++V Y S + DE +L FG + +K + + + FV + DE
Sbjct: 257 PTGAGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDE 315
Query: 271 ARRAKEGLQGRLFNDPRITIMFSSSE 296
A A L G D + + F +S+
Sbjct: 316 AAMAIASLNGYRLGDRVLQVSFKTSK 341
>gi|348570876|ref|XP_003471222.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein-like
[Cavia porcellus]
Length = 3771
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 532 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 591
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 592 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVIKVVFDRLKGMA 650
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 651 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 681
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 413 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 472
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 473 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 531
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 532 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 591
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP+I
Sbjct: 592 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVI 639
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 610 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVIKVVFDRLKGMALVLYNEIEYAQAAVKETKG 669
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 670 RKIGGNKIKVDFA 682
>gi|281346233|gb|EFB21817.1| hypothetical protein PANDA_010353 [Ailuropoda melanoleuca]
Length = 3648
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 412 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 471
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 472 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 530
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 531 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 561
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 293 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 352
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 353 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 411
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 412 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 471
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 472 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 519
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 490 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 549
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 550 RKIGGNKIKVDFA 562
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 137/320 (42%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 158 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQ 217
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G
Sbjct: 218 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHAGTGW 277
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 278 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 336
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 337 SLNGYRLGDRVLQVSFKTNK 356
>gi|168273122|dbj|BAG10400.1| spen homolog, transcriptional regulator [synthetic construct]
Length = 3623
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 396 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 455
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 456 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 514
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 515 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 545
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 277 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 336
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 337 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 395
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 396 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 455
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 456 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 503
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 474 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 533
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 534 RKIGGNKIKVDFA 546
>gi|410966072|ref|XP_003989562.1| PREDICTED: msx2-interacting protein, partial [Felis catus]
Length = 3651
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 410 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 469
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 470 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 528
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 529 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 559
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 291 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 350
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 351 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 409
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 410 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 469
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 470 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 517
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 488 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 547
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 548 RKIGGNKIKVDFA 560
>gi|359319100|ref|XP_003638995.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein [Canis
lupus familiaris]
Length = 3612
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|323507800|emb|CBQ67671.1| related to JSN1-RNA-binding protein (pumilio family) [Sporisorium
reilianum SRZ2]
Length = 1333
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 49/200 (24%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ LW+G+L T++DL ++ ++G+++ + +S AFV F + DA AK+ L G
Sbjct: 539 PTRTLWIGHLRPTVTNSDLLQILTRYGSIETIRLVPEKSCAFVNFVEIADAVRAKEDLLG 598
Query: 79 SDFRGNP---------IKIEFARP--------------------------------AKP- 96
+++ F +P A+P
Sbjct: 599 RLGGRLGLGSMGPEGQVRVGFGKPESVPQVGLGGFAPNMDTLGGLADGAAANDAFGAEPV 658
Query: 97 ----SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKN 152
S+ LW+G I T S E L F FG IE + L + AFV + RL+DA A K
Sbjct: 659 NQEASRALWIGSIPSTTSTETLVSIFAPFGPIESIRVLASKSCAFVNFDRLDDAMAARKA 718
Query: 153 INGRQIGGEQ---LRVDFLR 169
++GR++ G + +R+ F +
Sbjct: 719 LHGREVLGAEVGPVRIGFAK 738
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKN-- 152
+P++ LW+G + TV+ +L + ++G+IE + + + + AFV + + DA A ++
Sbjct: 538 QPTRTLWIGHLRPTVTNSDLLQILTRYGSIETIRLVPEKSCAFVNFVEIADAVRAKEDLL 597
Query: 153 ------INGRQIGGE-QLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKR 205
+ +G E Q+RV F + E P P + G +D +A
Sbjct: 598 GRLGGRLGLGSMGPEGQVRVGF-----GKPESVPQVGLGGFAPNMDTLGGLADGAAANDA 652
Query: 206 SHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEF 265
+ N++ S+ LW+G PS E ++ + FG IE I+ S++ +FV F
Sbjct: 653 FGAEPV---NQEA--SRALWIGSIPSTTSTETLV-SIFAPFGPIESIRVLASKSCAFVNF 706
Query: 266 RSVDEARRAKEGLQGR 281
+D+A A++ L GR
Sbjct: 707 DRLDDAMAARKALHGR 722
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S LW+G++ + T+ L +F FG ++ + +S+S AFV F R++DA AA+ AL G
Sbjct: 663 SRALWIGSIPSTTSTETLVSIFAPFGPIESIRVLASKSCAFVNFDRLDDAMAARKALHGR 722
Query: 80 DFRG---NPIKIEFAR-PAKPS 97
+ G P++I FA+ PA+ S
Sbjct: 723 EVLGAEVGPVRIGFAKVPARVS 744
>gi|401410022|ref|XP_003884459.1| hypothetical protein NCLIV_048580 [Neospora caninum Liverpool]
gi|325118877|emb|CBZ54429.1| hypothetical protein NCLIV_048580 [Neospora caninum Liverpool]
Length = 420
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S L+ G L D T+ L+++ + G L KV Y + AFV F + A+AA+DAL+GS
Sbjct: 65 SRTLFFGRLPEDVTEDTLRDVVAQHGDLKKVAVYPEKRMAFVEFYDLRHAEAARDALRGS 124
Query: 80 DFRGNPIKIEFARPAKPSKH-----LWV---------GGISQTVSKEELEEGFLKFGNIE 125
D G ++++F+ +P K L+V G + S + E F K G+++
Sbjct: 125 DVLGKRVEVQFSAVKRPDKDGNTGTLYVRPVSTVHVSGSWTDPNSLDAYRELFAKHGDLK 184
Query: 126 DFKFLKDGNT-AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ T FVEY L DA +AL ++NG G L + F
Sbjct: 185 KVSANRKRETEKFVEYFDLRDAQKALDSLNGYVFNGATLHICF 227
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 217 DGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
D S+ L+ G P + E L + + G+++++ YP + +FVEF + A A++
Sbjct: 61 DALQSRTLFFGRLPE-DVTEDTLRDVVAQHGDLKKVAVYPEKRMAFVEFYDLRHAEAARD 119
Query: 277 GLQGRLFNDPRITIMFSSSELAPGKD 302
L+G R+ + FS+ + P KD
Sbjct: 120 ALRGSDVLGKRVEVQFSAVKR-PDKD 144
>gi|410032347|ref|XP_003949352.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein [Pan
troglodytes]
Length = 3974
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 744 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 803
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 804 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVLKVVFDRLKGMA 862
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 863 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 893
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 625 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 684
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 685 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 743
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 744 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 803
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 804 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVL 851
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 822 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVLKVVFDRLKGMALVLYNEIEYAQAAVKETKG 881
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 882 RKIGGNKIKVDFA 894
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 146/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 265
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 266 PSTCSPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 324
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 325 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 376
>gi|296206804|ref|XP_002750362.1| PREDICTED: msx2-interacting protein [Callithrix jacchus]
Length = 3675
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|426327960|ref|XP_004024776.1| PREDICTED: msx2-interacting protein [Gorilla gorilla gorilla]
Length = 3662
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|119572141|gb|EAW51756.1| spen homolog, transcriptional regulator (Drosophila) [Homo sapiens]
Length = 3664
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|405963075|gb|EKC28679.1| ELAV-like protein 2 [Crassostrea gigas]
Length = 502
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 132/316 (41%), Gaps = 42/316 (13%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P++NL V L +D D KELF K G L DK T YS F FV + EDA+
Sbjct: 189 PNTNLIVNYLPQTLSDEDFKELFEKIGPLKSYKIVRDKATNYSY-GFGFVDYVNEEDAER 247
Query: 72 AKDALQGSDFRGNPIKIEFARP---AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
A + G IK+ +AR ++++ I ++ +EEL F +FG I +
Sbjct: 248 AIHEMNGQKMDHKTIKVSYARKNDSESKGANIYIANIPRSFGEEELGAHFRQFGEIIQVR 307
Query: 129 FLKDGNT------AFVEYSRLEDAAEALKNINGRQI--GGEQLRVDF------------- 167
L+D +T FV Y++ +AA AL+ +NG+ + G L + F
Sbjct: 308 LLRDKSTNESKGVGFVYYTKRSEAAAALEAMNGKTLLKGYPALSIKFADINARKGRAPYQ 367
Query: 168 LRSQPSRREQWPNSH---DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKIL 224
++ Q + R P S+ GP+ T N + S G +IL
Sbjct: 368 IQVQTNLRYPTPGSNPYGGGPHGPMRSTNTRMRFNPMSGNYSPGVGGGGGGGGDMGGQIL 427
Query: 225 WVGYPPSVQMDEQMLHNAMILFGEIERIKSY------PSRNYSFVEFRSVDEARRAKEGL 278
+V Y +E+ L G + ++ + Y FV + + EA A L
Sbjct: 428 FV-YNIGYDAEEKTLWQLFAPLGTVTKVNVIMDHVRNQCKGYGFVTMKHLHEAEGAILAL 486
Query: 279 QGRLFNDPRITIMFSS 294
G ++N+ R+++ F S
Sbjct: 487 NGAMYNNRRLSVSFKS 502
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TTD +LK +FG+FG + S+ F FV F+ +DA A +A
Sbjct: 207 NNVFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAVEA 266
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R N +K F + K + +L+V + ++ ++L
Sbjct: 267 LNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLDDSLGDDKL 326
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG I K ++D N + FV +S ++A+ AL +NG+ + + L V +
Sbjct: 327 KELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALLEMNGKMVVSKPLYVTLAQ 386
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 387 RKEDRRARL 395
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 64/289 (22%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TDA L +LF + G + V T+ S + +V F +DA A
Sbjct: 27 TTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARAL 86
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
D L + PI+I ++ PS ++++ + + + + L + F FGNI
Sbjct: 87 DVLNFTPLNNRPIRIMYSH-RDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSC 145
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D + FV++ E A +A++ +NG + +Q+ V FLR Q E+ +
Sbjct: 146 KVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQ----ERESTA 201
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
A+ + F N S S DE L N
Sbjct: 202 DKAKFNNV------FVKNLSE----------------------------STTDDE--LKN 225
Query: 242 AMILFGEIE-----RIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
FG I R S+ + FV F + D+A RA E L G+ F+D
Sbjct: 226 VFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAVEALNGKKFDD 274
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 114/285 (40%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKDAL 76
N+++ NL L + F FG + KV T SS + + FV F E A+ A + L
Sbjct: 117 NIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKL 176
Query: 77 QGSDFRGNPI-------KIEFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
G + K E A +K +++V +S++ + +EL+ F +FG I
Sbjct: 177 NGMLLNDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITSA 236
Query: 128 KFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
++DG+ FV + +DAA A++ +NG++ ++W
Sbjct: 237 VVMRDGDGKSKCFGFVNFENADDAARAVEALNGKKFDD---------------KEW---- 277
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+G+ S+ + K+ Q S+ D L+V D++ L
Sbjct: 278 ------YVGKAQKKSERENELKQRFEQ-SMKEAADKYQGANLYVKNLDDSLGDDK-LKEL 329
Query: 243 MILFGEIERIKSYP-----SRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K SR FV F + DEA RA + G++
Sbjct: 330 FSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALLEMNGKM 374
>gi|5541865|emb|CAB51072.1| hypothetical protein [Homo sapiens]
Length = 3261
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDALQG 78
L++GNL TT DL+ +F +FG + + +AF+ + + A + G
Sbjct: 36 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDG 95
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A V
Sbjct: 96 EYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALV 154
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
Y+ +E A A+K GR+IGG +++VDF
Sbjct: 155 LYNEIEYAQAAVKETKGRKIGGNKIKVDF 183
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 112 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 171
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 172 RKIGGNKIKVDFA 184
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALK 151
K ++ L++G + +T + +L F +FG I D K AF++Y + +A+K
Sbjct: 32 KATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIK 91
Query: 152 NINGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
++G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 92 KMDGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 141
>gi|14790190|ref|NP_055816.2| msx2-interacting protein [Homo sapiens]
gi|41688816|sp|Q96T58.1|MINT_HUMAN RecName: Full=Msx2-interacting protein; AltName:
Full=SMART/HDAC1-associated repressor protein; AltName:
Full=SPEN homolog
gi|14029609|gb|AAK52750.1|AF356524_1 nuclear receptor transcription cofactor [Homo sapiens]
Length = 3664
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 49 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 107
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 108 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 167
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 168 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 226
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 227 QLYQSPNRR--YPGPLAQQAQRF--RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 281
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 282 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 341
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 342 RVLQVSFKTNK 352
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 24 WVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS-FAFVYFKRVEDAKAAKDALQGS 79
+VGNLS D T+ + +LF + G + +T ++S + FV F DA AA A+ G
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 81
Query: 80 DFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
G +K+ +A K H++VG +S ++ E+++ F FG I D + +KD
Sbjct: 82 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 141
Query: 133 GNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ--PSRREQWPNSHDA 184
T FV + DA A+ ++ G+ +GG Q+R + Q N+
Sbjct: 142 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQL 201
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
R ++ N+ P + ++ G S + +Q++
Sbjct: 202 RFEDVV------------------------NQSSPKNCTVYCGGIAS-GLTDQLMRQTFS 236
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
FG+I I+ +P + YSFV F + + A A + G
Sbjct: 237 PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 272
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 108 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 167
Query: 76 LQGSDFRGNPIKIEFARPAKP---------SKHL----------------WVGGISQTVS 110
+ G G I+ P +K L + GGI+ ++
Sbjct: 168 MGGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 227
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 228 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 287
Query: 171 QP 172
P
Sbjct: 288 SP 289
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 208 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 267
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 268 VSVNGTTIEGHVVKCYWGK 286
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS T++ DL++ FG++G + V S+ F FV F+ EDA A DA
Sbjct: 219 NNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFENPEDAAKAVDA 278
Query: 76 LQGSDF---------------RGNPIKIEFARPAKP------SKHLWVGGISQTVSKEEL 114
L G F R +K F + K +L+V + T+ E+L
Sbjct: 279 LNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLDDTIDDEKL 338
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F ++G I K ++D + FV +S E+A+ AL +NG+ I + L V +
Sbjct: 339 KELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQ 398
Query: 170 SQPSRR 175
+ RR
Sbjct: 399 RKEERR 404
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L TD+ L +LF + G + V +T S + +V + +DA A
Sbjct: 39 TTSLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAI 98
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
D L + I++ +R + ++++ + +++ + L E F FG I K
Sbjct: 99 DVLNFTPLNNKTIRVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCK 158
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQ 171
D + FV+Y E A A+ +NG + +Q+ V FLR Q
Sbjct: 159 IATDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQ 207
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TTD +L + FG++G + SR F FV F+ +DA A +
Sbjct: 212 NNVYVKNLSESTTDEELMKFFGEYGTITSAVIMRDADGKSRCFGFVNFENPDDAAKAVEG 271
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G R +K F + K S +L++ + T+S E+L
Sbjct: 272 LNGKKVDDKEWYVGKAQKKSEREQELKGRFEQSIKESADKYQGVNLYLKNLDDTISDEKL 331
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F ++G I K ++D + FV +S E+A+ AL +NG+ I G+ L V +
Sbjct: 332 KEMFAEYGTITSCKVMRDPTGIGRGSGFVAFSTPEEASRALGEMNGKMIAGKPLYVALAQ 391
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 392 RKEDRRARL 400
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 126/310 (40%), Gaps = 70/310 (22%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFG------KFGALDKVTTYSS 55
APPP+ A ++ +++L+VG+L + DA L +LF +TT S
Sbjct: 14 APPPNGVANAPNNPNQFVTTSLYVGDLEQNVNDAQLYDLFNQVVQVVSVRVCRDLTTRRS 73
Query: 56 RSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTV 109
+ +V F +DA A D L + PI+I ++ PS ++++ + + +
Sbjct: 74 LGYGYVNFSNPQDAARALDVLNFTPLNNRPIRIMYSH-RDPSLRKSGTANIFIKNLDKAI 132
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
+ L + F FG I K D + FV++ E A A+ +NG I +Q+
Sbjct: 133 DHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDSEESAQNAIDKLNGMLINDKQVY 192
Query: 165 V-DFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKI 223
V FLR Q RE + T F++ Y ++ +S+
Sbjct: 193 VGHFLRKQ--DRENALSK------------TKFNN---VYVKNLSESTT----------- 224
Query: 224 LWVGYPPSVQMDEQMLHNAMILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAK 275
DE++ M FGE I S SR + FV F + D+A +A
Sbjct: 225 -----------DEEL----MKFFGEYGTITSAVIMRDADGKSRCFGFVNFENPDDAAKAV 269
Query: 276 EGLQGRLFND 285
EGL G+ +D
Sbjct: 270 EGLNGKKVDD 279
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKD 74
++N+++ NL L + F FG + K+ T +S + + FV F E A+ A D
Sbjct: 120 TANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDSEESAQNAID 179
Query: 75 ALQGSDFRGNPIKI---------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + E A +++V +S++ + EEL + F ++G I
Sbjct: 180 KLNGMLINDKQVYVGHFLRKQDRENALSKTKFNNVYVKNLSESTTDEELMKFFGEYGTIT 239
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQ 177
++D + FV + +DAA+A++ +NG+++ ++ V + + S REQ
Sbjct: 240 SAVIMRDADGKSRCFGFVNFENPDDAAKAVEGLNGKKVDDKEWYVGKAQKK-SEREQ 295
>gi|332261865|ref|XP_003279986.1| PREDICTED: msx2-interacting protein [Nomascus leucogenys]
Length = 3655
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 419 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 478
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 479 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 537
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 538 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 568
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 300 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 359
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 360 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 418
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 419 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 478
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 479 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 526
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 497 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 556
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 557 RKIGGNKIKVDFA 569
>gi|347446713|ref|NP_571528.2| ELAV-like protein 4 isoform 3 [Danio rerio]
Length = 403
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 60/345 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 65 CPSPMQTGGSNDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 119
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 120 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 179
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT---------AFVEYSRLEDAAEALKNINGRQIGG-- 160
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G
Sbjct: 180 KELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAA 239
Query: 161 EQLRVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKR 205
E + V F L P+RR P H A+ R + KR
Sbjct: 240 EPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKR 295
Query: 206 SHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK---- 253
P S VG N G ++V Y S DE +L FG + +K
Sbjct: 296 FSPITIDSMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRD 354
Query: 254 --SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + + FV + DEA A L G D + + F +++
Sbjct: 355 FNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 399
>gi|347446708|ref|NP_001231529.1| ELAV-like protein 4 isoform 1 [Danio rerio]
Length = 411
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 60/345 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 73 CPSPMQTGGSNDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 127
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 128 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 187
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT---------AFVEYSRLEDAAEALKNINGRQIGG-- 160
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G
Sbjct: 188 KELEQLFSQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAA 247
Query: 161 EQLRVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKR 205
E + V F L P+RR P H A+ R + KR
Sbjct: 248 EPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKR 303
Query: 206 SHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK---- 253
P S VG N G ++V Y S DE +L FG + +K
Sbjct: 304 FSPITIDSMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRD 362
Query: 254 --SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + + FV + DEA A L G D + + F +++
Sbjct: 363 FNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 407
>gi|194208003|ref|XP_001914854.1| PREDICTED: msx2-interacting protein [Equus caballus]
Length = 3664
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 434 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 493
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 494 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVIKVVFDRLKGMA 552
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 553 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 583
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ A + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 315 PTSQLLSALEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 374
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 375 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 433
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 434 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 493
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP+I
Sbjct: 494 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVI 541
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 512 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVIKVVFDRLKGMALVLYNEIEYAQAAVKETKG 571
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 572 RKIGGNKIKVDFA 584
>gi|380810782|gb|AFE77266.1| msx2-interacting protein [Macaca mulatta]
gi|383416741|gb|AFH31584.1| msx2-interacting protein [Macaca mulatta]
Length = 3672
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|395821181|ref|XP_003783926.1| PREDICTED: msx2-interacting protein [Otolemur garnettii]
Length = 3674
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LILYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A + + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALILYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|297666332|ref|XP_002811483.1| PREDICTED: msx2-interacting protein [Pongo abelii]
Length = 3662
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|393220498|gb|EJD05984.1| hypothetical protein FOMMEDRAFT_119427 [Fomitiporia mediterranea
MF3/22]
Length = 1316
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 21/195 (10%)
Query: 98 KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGR- 156
+ LW+G + +V+ E+L F +G IE + L + FV + EDA A ++ R
Sbjct: 453 RSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQEDAIRAKDDVLNRL 512
Query: 157 --QIG---GEQLRVDFLRSQ-----PSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS 206
QIG G +R+ F +++ P++ P + A GP +G N+ A S
Sbjct: 513 GGQIGMPNGAAVRIGFGKAESAPVAPAKGASGPGTTAAPTGP-TKSSSGNGANNMAGIES 571
Query: 207 HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFR 266
QS+ P++ LW+G PS +L + +G IE + +N F+ F
Sbjct: 572 QLQST--------PTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFINFE 622
Query: 267 SVDEARRAKEGLQGR 281
+D+A RA++ L GR
Sbjct: 623 RLDDAVRARKALNGR 637
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 52/200 (26%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL----- 76
+LW+GNL + T L +F +GA++ + + FV F EDA AKD +
Sbjct: 454 SLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQEDAIRAKDDVLNRLG 513
Query: 77 -QGSDFRGNPIKIEFAR-------PAK--------------------------------- 95
Q G ++I F + PAK
Sbjct: 514 GQIGMPNGAAVRIGFGKAESAPVAPAKGASGPGTTAAPTGPTKSSSGNGANNMAGIESQL 573
Query: 96 ---PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKN 152
P++ LW+G I T + + F +G IE + L N F+ + RL+DA A K
Sbjct: 574 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 633
Query: 153 INGRQIGGEQ---LRVDFLR 169
+NGR + G +R+ F +
Sbjct: 634 LNGRDVLGSDVGAIRIGFAK 653
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 574 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 633
Query: 76 LQGSDFRGN---PIKIEFAR 92
L G D G+ I+I FA+
Sbjct: 634 LNGRDVLGSDVGAIRIGFAK 653
>gi|355744939|gb|EHH49564.1| hypothetical protein EGM_00244, partial [Macaca fascicularis]
Length = 3638
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 413 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 472
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 473 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 531
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 532 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 562
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 294 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 353
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 354 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 412
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 413 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 472
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 473 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 520
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 491 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 550
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 551 RKIGGNKIKVDFA 563
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 53 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 111
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 112 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 171
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 172 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 230
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 231 QLYQSPNRR--YPGPLAQQAQRF--RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 285
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 286 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 345
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 346 RVLQVSFKTNK 356
>gi|195433104|ref|XP_002064555.1| GK23912 [Drosophila willistoni]
gi|194160640|gb|EDW75541.1| GK23912 [Drosophila willistoni]
Length = 5727
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T ++L+ F FG + ++ ++AF + + A + G
Sbjct: 707 LFIGNLEKDITASELRVHFESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 766
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ VS+ L+ F +FG + ++ A V Y
Sbjct: 767 LGSNRIKLGFGK-SMPTNCVWIDGVGDKVSESVLQSQFTRFGTVTKVSIDRNRQLALVLY 825
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + G++L+VDF
Sbjct: 826 DQVQNAQAAVKDMRGTIMRGKRLQVDF 852
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 76/302 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ ED + A +
Sbjct: 605 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPEDVEKALEVS 664
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 665 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITASELRVH 724
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 725 FESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMPTNC 784
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
W I G G S
Sbjct: 785 V-W----------IDGVGDKVS-------------------------------------- 795
Query: 236 EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSS 295
E +L + FG + ++ +R + V + V A+ A + ++G + R+ + F+S
Sbjct: 796 ESVLQSQFTRFGTVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTIMRGKRLQVDFASR 855
Query: 296 EL 297
E
Sbjct: 856 EC 857
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FG + KV+ +R A V + +V++A+AA ++G
Sbjct: 781 PTNCVWIDGVGDKVSESVLQSQFTRFGTVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 840
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 841 TIMRGKRLQVDFA 853
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFR--FSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 271
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 272 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 331
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 332 RVLQVSFKTNK 342
>gi|403287708|ref|XP_003935077.1| PREDICTED: msx2-interacting protein [Saimiri boliviensis
boliviensis]
Length = 3542
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 420 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 479
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 480 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 538
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 539 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 569
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 301 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 360
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 361 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 419
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 420 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 479
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 480 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 527
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 498 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 557
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 558 RKIGGNKIKVDFA 570
>gi|444728133|gb|ELW68597.1| Msx2-interacting protein [Tupaia chinensis]
Length = 3511
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 419 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 478
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 479 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVLKVVFDRLKGMA 537
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 538 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 568
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 300 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 359
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 360 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 418
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 419 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 478
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 479 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVL 526
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 497 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVLKVVFDRLKGMALVLYNEIEYAQAAVKETKG 556
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 557 RKIGGNKIKVDFA 569
>gi|355557579|gb|EHH14359.1| hypothetical protein EGK_00272 [Macaca mulatta]
Length = 3529
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 411 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 470
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 471 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 529
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 530 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 560
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 292 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 351
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 352 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 410
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 411 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 470
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 471 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 518
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 489 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 548
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 549 RKIGGNKIKVDFA 561
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFR--FSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 271
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 272 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSLNGYRLGD 331
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 332 RVLQVSFKTNK 342
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRF--RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 271
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 272 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 331
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 332 RVLQVSFKTNK 342
>gi|397469292|ref|XP_003806295.1| PREDICTED: msx2-interacting protein isoform 1 [Pan paniscus]
gi|397469294|ref|XP_003806296.1| PREDICTED: msx2-interacting protein isoform 2 [Pan paniscus]
Length = 3259
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDALQG 78
L++GNL TT DL+ +F +FG + + +AF+ + + A + G
Sbjct: 36 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDG 95
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A V
Sbjct: 96 EYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVLKVVFDRLKGMALV 154
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
Y+ +E A A+K GR+IGG +++VDF
Sbjct: 155 LYNEIEYAQAAVKETKGRKIGGNKIKVDF 183
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 112 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVLKVVFDRLKGMALVLYNEIEYAQAAVKETKG 171
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 172 RKIGGNKIKVDFA 184
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALK 151
K ++ L++G + +T + +L F +FG I D K AF++Y + +A+K
Sbjct: 32 KATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIK 91
Query: 152 NINGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
++G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 92 KMDGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVL 141
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 61/294 (20%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRS----------------FAFV 61
L+VGNLS D T+ + +LF + G SSR + FV
Sbjct: 10 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQHTSNDPYCFV 69
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 70 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 129
Query: 115 EEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 130 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Query: 169 RSQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV 226
+P + Q N+ R ++ N+ P + ++
Sbjct: 190 TRKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYC 225
Query: 227 GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
G S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 226 GGIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 278
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 114 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 173
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 174 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 233
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 234 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 293
Query: 171 QP 172
P
Sbjct: 294 SP 295
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 214 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 273
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 274 VSVNGTTIEGHVVKCYWGK 292
>gi|221116369|ref|XP_002164038.1| PREDICTED: putative RNA-binding protein 15B-like [Hydra
magnipapillata]
Length = 620
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSR------SFAFVYFKRVEDAKAAKDAL 76
L+VGNL T +L +F +GA+D + R ++AF+ + +E A +AK+ +
Sbjct: 185 LFVGNLDQGITKDELMRIFEHWGAIDDIDV--KRPPNGIPAYAFIKYLELEAAASAKNQM 242
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G + G IK+ + + +PS LW+GG+ S + L F +FG + +++K A
Sbjct: 243 FGKEINGRLIKVGYGK-TQPSTRLWIGGLGHWCSSDLLNREFDRFGALRKIEYVKGSRHA 301
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHD 183
FVE+ ++ A+ A + G +GG ++ ++P + HD
Sbjct: 302 FVEFESIDAASAAHTEMRGFPLGGPDRKIKIDYAEPDSNCHSSDDHD 348
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 53/190 (27%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN----TAFVEYSRLEDAAEAL 150
+ ++ L+VG + Q ++K+EL F +G I+D + N AF++Y LE AA A
Sbjct: 180 RATRTLFVGNLDQGITKDELMRIFEHWGAIDDIDVKRPPNGIPAYAFIKYLELEAAASAK 239
Query: 151 KNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS 210
+ G++I G ++V + ++QPS R
Sbjct: 240 NQMFGKEINGRLIKVGYGKTQPSTR----------------------------------- 264
Query: 211 SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDE 270
LW+G +L+ FG + +I+ ++FVEF S+D
Sbjct: 265 -------------LWIG-GLGHWCSSDLLNREFDRFGALRKIEYVKGSRHAFVEFESIDA 310
Query: 271 ARRAKEGLQG 280
A A ++G
Sbjct: 311 ASAAHTEMRG 320
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
PS+ LW+G L + L F +FGAL K+ AFV F+ ++ A AA ++G
Sbjct: 261 PSTRLWIGGLGHWCSSDLLNREFDRFGALRKIEYVKGSRHAFVEFESIDAASAAHTEMRG 320
Query: 79 SDFRG--NPIKIEFARP 93
G IKI++A P
Sbjct: 321 FPLGGPDRKIKIDYAEP 337
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 41/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFR-RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 272
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 273 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 332
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 333 RVLQVSFKTNK 343
>gi|45382273|ref|NP_990161.1| ELAV-like protein 4 [Gallus gallus]
gi|5739519|gb|AAD50508.1|AF176675_1 RNA-binding protein HuD [Gallus gallus]
Length = 371
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 211 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 266
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L G + +K +
Sbjct: 267 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPSGAVNNVKVIRDFNT 325
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 326 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367
>gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens]
Length = 366
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 143/342 (41%), Gaps = 57/342 (16%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVGQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP 208
V F L P+RR P H A+ R + KR P
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSP 261
Query: 209 ------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------S 254
S VG N G ++V Y S DE +L FG + +K +
Sbjct: 262 ITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNT 320
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + FV + DEA A L G D + + F +++
Sbjct: 321 NKCKGFGFVTMTNYDEAAMAITSLNGYRLGDRVLQVSFKTNK 362
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 61/294 (20%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFV 61
L+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 130
Query: 115 EEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 131 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 190
Query: 169 RSQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV 226
+P + Q N+ R ++ N+ P + ++
Sbjct: 191 TRKPPAPKSTQETNTKQLRFEDVV------------------------NQSSPKNCTVYC 226
Query: 227 GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
G S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 227 GGIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 279
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 115 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 174
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 175 MGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 234
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 235 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 294
Query: 171 QP 172
P
Sbjct: 295 SP 296
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 275 VSVNGTTIEGHVVKCYWGK 293
>gi|332226897|ref|XP_003262629.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Nomascus leucogenys]
Length = 411
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 55/299 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNLS D T+A + +LF + G T + + FV F A AA A+ G
Sbjct: 46 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 105
Query: 79 SDFRGNPIKIEFARPAKPSK------------------HLWVGGISQTVSKEELEEGFLK 120
G +K+ +A K H++VG +S ++ E+++ F
Sbjct: 106 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 165
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
FG I +F + A +++S DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 166 FGRISSNQFYMN---AIIKFS---DAENAIQQMGGQWLGGRQIRTNWATRKPPAPK---- 215
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQM 238
S Y+ + Q S N+ P + ++ G S + EQ+
Sbjct: 216 --------------------STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQL 254
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
+ FG+I I+ +P + YSFV F S + A A + G + + L
Sbjct: 255 MRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 313
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 31/169 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
+++VG+LS + T D+K F FG + SS F + DA+ A + G
Sbjct: 144 HVFVGDLSPEITTEDIKAAFAPFGRI------SSNQFYMNAIIKFSDAENAIQQMGGQWL 197
Query: 82 RGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVSKEELEE 116
G I+ +A PA S + ++ GG++ ++++ + +
Sbjct: 198 GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQ 257
Query: 117 GFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 258 TFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 306
>gi|449514035|ref|XP_002190678.2| PREDICTED: ELAV-like protein 2-like [Taeniopygia guttata]
Length = 380
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DAK A
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-PSLGYGFVNYVDPKDAKKAV 125
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T+++ ELE+ F ++G+I + L
Sbjct: 126 NTLNGFRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQTELEQLFSQYGHIITSRIL 185
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQWPNSH 182
D T F+ + + +A EA+K +NG++ G E + V F + PS++ +
Sbjct: 186 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPVTVKF-ANNPSQKTNQATPN 244
Query: 183 DARDGPIIGRGTGFS-DN--HSAY--KRSHPQSS------VGRNRDGPPSK--ILWVGYP 229
P+ + F DN + AY KR P + G N G ++V Y
Sbjct: 245 RRYPAPLAQQAQRFRLDNLLNIAYGVKRFPPMTIDGMTALAGINISGHAGTGWCIFV-YN 303
Query: 230 PSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLF 283
+ DE +L FG + +K + + + FV + DEA A L G
Sbjct: 304 LAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRL 363
Query: 284 NDPRITIMFSSSE 296
D + + F +++
Sbjct: 364 GDRVLQVSFKTNK 376
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 61/296 (20%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFA 59
+N +VGNLS D T+ + +LF + G S+ +
Sbjct: 12 ANSYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 71
Query: 60 FVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKE 112
FV F DA AA A+ G G +K+ +A K H++VG +S ++ E
Sbjct: 72 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 131
Query: 113 ELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVD 166
+++ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R +
Sbjct: 132 DIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 191
Query: 167 FLRSQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKIL 224
+ +P + Q N+ R ++ N+ P + +
Sbjct: 192 WATRKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTV 227
Query: 225 WVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
+ G S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 228 YCGGIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 282
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 118 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 177
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 178 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 237
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 238 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 297
Query: 171 QP 172
P
Sbjct: 298 SP 299
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 218 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 277
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 278 VSVNGTTIEGHVVKCYWGK 296
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 38/211 (18%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY------SSRSFAFVYFKRVEDAKAAKD 74
+N++V NL DTTDA L ++F KFG + V S+ F FV +++VEDA+AA +
Sbjct: 224 TNVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVN 283
Query: 75 ALQGSDFRGNPIKIEFARPAKPSK-----------------------HLWVGGISQTVSK 111
AL G++ G + + AR K ++ +L+V + + +
Sbjct: 284 ALNGTELAGKTLFV--ARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLDDAIDE 341
Query: 112 EELEEGFLKFGNIEDFKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGG--EQLR 164
+++ F FG I K ++D G + F+ +S E+A +A+ +NG+ I G + L
Sbjct: 342 DKIRTEFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMNGQTIQGFPKPLY 401
Query: 165 VDFLRSQPSRREQWPNSHDARDGPIIGRGTG 195
V + RR Q + G + GR G
Sbjct: 402 VALAQRAEDRRAQLAAHFAQQRGNMGGRMAG 432
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
PS +L+VG+L + T+A L E+F G + + T S +A+V F DA+ A
Sbjct: 43 PSGSLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERA 102
Query: 73 KDALQGSDFRGNPIKIEFAR--PAKPSKHL---WVGGISQTVSKEELEEGFLKFGNIEDF 127
D L S RG P +I +++ PA L ++ + +T+ + L + F FGNI
Sbjct: 103 LDTLNYSLIRGKPCRIMWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGNILSC 162
Query: 128 KFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
K + D N + FV Y E A A+ +NG I G+Q+ V + R E
Sbjct: 163 KVVTDENGSKGYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVPRKERVE 215
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 52/285 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGAL--DKVTT--YSSRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + KV T S+ + FV+++ E A+ A +
Sbjct: 134 NVFIKNLDKTIDNKALLDTFSAFGNILSCKVVTDENGSKGYGFVHYETQEAAETAIAKVN 193
Query: 78 GSDFRGNPI----------KIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
G G + ++E +++V + + + L + F KFG I
Sbjct: 194 GMVINGKQVFVGIFVPRKERVELGEGVTKFTNVFVKNLPEDTTDAALNDMFSKFGKITSV 253
Query: 128 KFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+K + FV Y ++EDA A+ +NG ++ G+ L V + + R +
Sbjct: 254 VIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARAQKKAEREAELKQR 313
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+DA I + G + Y ++ + +DE +
Sbjct: 314 YDALRLERINKYQGI----NLYVKNLDDA-----------------------IDEDKIRT 346
Query: 242 AMILFGEIERIKSY-----PSRNYSFVEFRSVDEARRAKEGLQGR 281
FG I +K SR + F+ F S +EA +A + G+
Sbjct: 347 EFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMNGQ 391
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS +TT+ DLKE+FGKFG + S+ F FV F+ +DA A
Sbjct: 219 NNVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAVQE 278
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R +K +F + + + +L++ + +V ++L
Sbjct: 279 LNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDDKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F ++G I K ++D N + FV + EDA+ AL +N + +G + L V +
Sbjct: 339 RELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYVALAQ 398
Query: 170 SQPSRR 175
+ R+
Sbjct: 399 RKEDRK 404
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L DA L ++F + G + V T S +A+V + DA A
Sbjct: 38 PATSLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARA 97
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
+ L + G PI+I ++ PS ++++ + +++ + L + F FGNI
Sbjct: 98 LEMLNFTPINGKPIRIMYSN-RDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS 156
Query: 127 FKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQ 171
K D + FV+Y R E A A+ +NG + +++ V F+R Q
Sbjct: 157 CKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQ 207
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 54/206 (26%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEA 149
P+ L+VG + +V +L + F + G + + +D NT A+V YS DAA A
Sbjct: 38 PATSLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARA 97
Query: 150 LKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
L+ +N I G+ +R+ + PS R+ G F N
Sbjct: 98 LEMLNFTPINGKPIRIMYSNRDPSLRKS-------------GTANIFIKNLDK------- 137
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIK-----SYPSRNYSFVE 264
+D + L++ +FG I K S S+ Y FV+
Sbjct: 138 -----------------------SIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQ 174
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITI 290
+ + A+ A + L G L ND ++ +
Sbjct: 175 YERDEAAQAAIDKLNGMLMNDKKVYV 200
>gi|313230196|emb|CBY07900.1| unnamed protein product [Oikopleura dioica]
Length = 423
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 24/189 (12%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKD 74
+NL V L + T L+ELF G ++ T S + FV F+R DAK A D
Sbjct: 120 TNLIVNYLPQNYTQDQLRELFSSIGDIETCKLCRHRETKMSLGYGFVNFRRSSDAKRAVD 179
Query: 75 ALQGSDFRGNPIKIEFARPAK---PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+ G + IK+ +ARP+ + +L+V GI ++++ E++ F + G I + L
Sbjct: 180 SFNGLSIQTKSIKVSYARPSSNIIKNTNLYVAGIPRSITLAEIKNLFGRLGKIISARILH 239
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQ-------- 177
D +T AF+ Y +A A+K+++ GE L V F + Q ++ Q
Sbjct: 240 DKDTGLSKGVAFIRYDTRVEAERAVKHMHHFNYEGEVLTVKFAKRQSLKKPQKLYLQNME 299
Query: 178 -WPNSHDAR 185
W NS R
Sbjct: 300 FWDNSLTQR 308
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 41/280 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL T+ L LF G ++ S +AF+ F A A A+ G
Sbjct: 10 LYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAATALAAMNGR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F +K+ +A P K H++VG +S + L+E F FG I + + ++
Sbjct: 70 LFLDKEMKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHDA 184
D T AFV + + DA A+ ++NG+ +G +R ++ R P R PN +
Sbjct: 130 DPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRA--PNKYSG 187
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
R F D + N+ P + ++ G + E+++
Sbjct: 188 Y------RAVTFDDVY--------------NQSSPTNCTVYCG-GIVEGLTEELVEQVFS 226
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFN 284
FG I I+++ + Y+F++F + + A A E + N
Sbjct: 227 RFGTIVEIRAFRDKGYAFIKFSTKEAATTAIEAVHNTEIN 266
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 32/176 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + LKE F FG + T S+ +AFV F + DA+ A ++
Sbjct: 97 HIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINS 156
Query: 76 LQGSDFRGNPIKIEFAR-----PAKPSKH---------------------LWVGGISQTV 109
+ G I+ ++ P P+K+ ++ GGI + +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPRAPNKYSGYRAVTFDDVYNQSSPTNCTVYCGGIVEGL 216
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++E +E+ F +FG I + + +D AF+++S E A A++ ++ +I G ++
Sbjct: 217 TEELVEQVFSRFGTIVEIRAFRDKGYAFIKFSTKEAATTAIEAVHNTEINGHPVKC 272
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 3 PPPSKFNR-------AYDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTT 52
PPP N+ +DD + +P + ++ G + T+ ++++F +FG + ++
Sbjct: 177 PPPRAPNKYSGYRAVTFDDVYNQSSPTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRA 236
Query: 53 YSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFAR 92
+ + +AF+ F E A A +A+ ++ G+P+K + +
Sbjct: 237 FRDKGYAFIKFSTKEAATTAIEAVHNTEINGHPVKCFWGK 276
>gi|28175406|gb|AAH45210.1| MGC52864 protein [Xenopus laevis]
Length = 460
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
++VGN+ TT ++ ELF ++G + V + +AFV+ + E+A A + L G +
Sbjct: 3 IFVGNVDDRTTQEEITELFERYGTV--VNCAVMKQYAFVHMRGAEEATKAVEDLNGRELN 60
Query: 83 GNPIKIEFARPA-KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
G + +E ++P + + ++VG +S + E+ + F ++G + + +KD AFV +
Sbjct: 61 GKKMLVELSKPRPQNTWKIFVGNVSSSCEGSEIRKIFEEYGRVVECDIVKD--YAFVHMT 118
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDF 167
R +A A++ +NG++I G+++ V+
Sbjct: 119 RESEARAAIEALNGKEIKGKRINVEM 144
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
++VG + ++EE+ E F ++G + + +K AFV E+A +A++++NGR++
Sbjct: 3 IFVGNVDDRTTQEEITELFERYGTVVNCAVMK--QYAFVHMRGAEEATKAVEDLNGRELN 60
Query: 160 GEQLRVDFLRSQP 172
G+++ V+ + +P
Sbjct: 61 GKKMLVELSKPRP 73
>gi|148222587|ref|NP_001079614.1| RNA binding motif protein 14 [Xenopus laevis]
gi|80477004|gb|AAI08787.1| MGC52864 protein [Xenopus laevis]
Length = 467
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
++VGN+ TT ++ ELF ++G + V + +AFV+ + E+A A + L G +
Sbjct: 10 IFVGNVDDRTTQEEITELFERYGTV--VNCAVMKQYAFVHMRGAEEATKAVEDLNGRELN 67
Query: 83 GNPIKIEFARPA-KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
G + +E ++P + + ++VG +S + E+ + F ++G + + +KD AFV +
Sbjct: 68 GKKMLVELSKPRPQNTWKIFVGNVSSSCEGSEIRKIFEEYGRVVECDIVKD--YAFVHMT 125
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDF 167
R +A A++ +NG++I G+++ V+
Sbjct: 126 RESEARAAIEALNGKEIKGKRINVEM 151
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
++VG + ++EE+ E F ++G + + +K AFV E+A +A++++NGR++
Sbjct: 10 IFVGNVDDRTTQEEITELFERYGTVVNCAVMK--QYAFVHMRGAEEATKAVEDLNGRELN 67
Query: 160 GEQLRVDFLRSQP 172
G+++ V+ + +P
Sbjct: 68 GKKMLVELSKPRP 80
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 146/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 265
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 266 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 324
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 325 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 376
>gi|449486615|ref|XP_002189293.2| PREDICTED: msx2-interacting protein [Taeniopygia guttata]
Length = 3566
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 452 TRTLFIGNLEKTTTYHDLRNIFQRFGGIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 511
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S V+ + L F ++G + F + A
Sbjct: 512 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSTNVTDQYLTRHFCRYGPVVKVVFDRLKGMA 570
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 571 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 601
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 42/209 (20%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL +TD LK+ LF +F KVT+ S + V+F++ ED + A +A
Sbjct: 352 IKVQNLPVRSTDTSLKDGLFHEFKKYGKVTSVQIHGASEERYGLVFFRQQEDQEKALNAS 411
Query: 77 QGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGISQTVSKEELE 115
+G F G I++ EF RP K ++ L++G + +T + +L
Sbjct: 412 KGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKATRTLFIGNLEKTTTYHDLR 470
Query: 116 EGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
F +FG I D K AF++Y + +A+K ++G +G +L++ F +S P
Sbjct: 471 NIFQRFGGIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMP 530
Query: 173 SR-----------REQWPNSHDARDGPII 190
+ +Q+ H R GP++
Sbjct: 531 TNCVWLDGLSTNVTDQYLTRHFCRYGPVV 559
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS + TD L F ++G + KV + A V + +E A+AA +G
Sbjct: 530 PTNCVWLDGLSTNVTDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 589
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 590 RKIGGNKIKVDFA 602
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 146/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 265
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 266 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 324
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 325 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 376
>gi|339243331|ref|XP_003377591.1| paraspeckle component 1 [Trichinella spiralis]
gi|316973596|gb|EFV57164.1| paraspeckle component 1 [Trichinella spiralis]
Length = 461
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 7 KFNRAYDD--------KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSF 58
+F+ +YD K+ + L++GNL DTT+ +L+ELF KFG L + S + F
Sbjct: 35 RFDASYDSEGALEIQRKKFSGRARLFIGNLPQDTTEEELRELFSKFGELSECFI-SRKGF 93
Query: 59 AFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGF 118
AFV A+ AK+ L G F+G P++I FA A L V +S VS E L F
Sbjct: 94 AFVRMANRPSAERAKEKLDGFVFKGRPLRIRFAANAAA---LRVKELSPLVSNELLFSAF 150
Query: 119 LKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNIN 154
FG++E + D VE+ R A EALK IN
Sbjct: 151 SMFGDVERAVHIVDDRGRPTGEGIVEFERKPGAQEALKRIN 191
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 107 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 165
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 166 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 225
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 226 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 284
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 285 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 342
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 343 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 401
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 402 IASLNGYRLGDRVLQVSFKTNK 423
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 27/190 (14%)
Query: 5 PSKFNRAYDDKEA---PPS---SNLWVGNLSADTTDADLKELFGKFG------ALDKVTT 52
P N +++E PP+ + L+ GNL + A L ++ F L T
Sbjct: 57 PETINVKLEEEEKDLDPPAAINTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDT 116
Query: 53 YSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKH---------LWVG 103
SR FAFV VED D L G+++ G +K+ FA KP+K L+VG
Sbjct: 117 GQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLYPETEHKLFVG 176
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQ 157
+S TV+ E L E F + G++ + + DG+T FV YS + AL++++G +
Sbjct: 177 NLSWTVTSESLAEAFRECGDVVGARVVYDGDTGRSRGYGFVCYSSKAEMETALESLDGFE 236
Query: 158 IGGEQLRVDF 167
+ G +RV+
Sbjct: 237 LEGRAIRVNL 246
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL TTD DLK +FG++G + S+ F FV F+ +DA + +A
Sbjct: 211 NNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKSKCFGFVNFENADDAARSVEA 270
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G F R +K F + K + +L+V + +++ ++L
Sbjct: 271 LNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVKNLDDSIADDKL 330
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +FG I K ++D N + FV +S E+A+ AL ++NG+ + + L V +
Sbjct: 331 RELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMNGKMVASKPLYVALAQ 390
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 391 RKEDRRARL 399
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 68/291 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
S++L+VG+L ++ TD+ L +LFG+ G + V +T S + +V + +DA A
Sbjct: 31 STSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAARAL 90
Query: 74 DALQGSDFRGNPIKI--EFARPA---KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
D L + G PI+I F P+ + ++++ + + + + L + F FG I K
Sbjct: 91 DMLNFTPLNGKPIRIMYSFRDPSIRRSGTANIFIKNLDKAIDNKALYDTFSTFGAILSCK 150
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D + FV++ E A A +NG + +Q+ V F+R Q RE N
Sbjct: 151 IATDASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVGPFVRKQ--ERESATNK- 207
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
T F ++ Y ++ +S+ DE + +
Sbjct: 208 -----------TKF---NNVYVKNLLESTT----------------------DEDLKN-- 229
Query: 243 MILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+FGE I S S+ + FV F + D+A R+ E L G+ F+D
Sbjct: 230 --IFGEYGPITSAVVMQDGDGKSKCFGFVNFENADDAARSVEALNGKKFDD 278
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFGA V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + ++ E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGINDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 128/293 (43%), Gaps = 59/293 (20%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ Y ++ + MD++ L +
Sbjct: 179 --REAELGARAKEFTN---VYIKNFGED-----------------------MDDERLKDL 210
Query: 243 MILFGEIERIK-----SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
FG +K S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 211 FGKFGAALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 140/309 (45%), Gaps = 37/309 (11%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 38 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 96
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 97 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 156
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRR------E 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 157 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKVNHTILS 215
Query: 177 QWPNSHDAR-DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPSVQ 233
Q S + R GP+ + FS S S G N G ++V Y +
Sbjct: 216 QLYQSPNRRYPGPLAQQAQRFS-RFSPMTIDGMTSLAGINFPGHAGTGWCIFV-YNLAPD 273
Query: 234 MDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPR 287
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 274 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 333
Query: 288 ITIMFSSSE 296
+ + F +S+
Sbjct: 334 LQVSFKTSK 342
>gi|363741980|ref|XP_417618.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC419460
[Gallus gallus]
Length = 3584
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 466 TRTLFIGNLEKTTTYHDLRNIFQRFGGIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 525
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S V+ + L F ++G + F + A
Sbjct: 526 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSTNVTDQYLTRHFCRYGPVVKVVFDRLKGMA 584
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 585 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 615
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 42/209 (20%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL +TD LK+ LF +F KVT+ S + V+F++ ED + A +A
Sbjct: 366 IKVQNLPVRSTDTSLKDGLFHEFKKYGKVTSVQIHGASEERYGLVFFRQQEDQEKALNAS 425
Query: 77 QGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGISQTVSKEELE 115
+G F G I++ EF RP K ++ L++G + +T + +L
Sbjct: 426 KGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKATRTLFIGNLEKTTTYHDLR 484
Query: 116 EGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
F +FG I D K AF++Y + +A+K ++G +G +L++ F +S P
Sbjct: 485 NIFQRFGGIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMP 544
Query: 173 SR-----------REQWPNSHDARDGPII 190
+ +Q+ H R GP++
Sbjct: 545 TNCVWLDGLSTNVTDQYLTRHFCRYGPVV 573
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS + TD L F ++G + KV + A V + +E A+AA +G
Sbjct: 544 PTNCVWLDGLSTNVTDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 603
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 604 RKIGGNKIKVDFA 616
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 61/294 (20%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFV 61
L+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 130
Query: 115 EEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 131 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 190
Query: 169 RSQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV 226
+P + Q N+ R ++ N+ P + ++
Sbjct: 191 TRKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYC 226
Query: 227 GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
G S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 227 GGIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 279
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 115 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 174
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 175 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 234
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 235 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 294
Query: 171 QP 172
P
Sbjct: 295 SP 296
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 275 VSVNGTTIEGHVVKCYWGK 293
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 146/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 24 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 78
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 79 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 138
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 139 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 198
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 199 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 258
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 259 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 317
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 318 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 369
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 146/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 28 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 82
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 83 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 142
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 143 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 202
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 203 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 262
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 263 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 321
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 322 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 373
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 125/317 (39%), Gaps = 61/317 (19%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFV 61
L+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 10 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 69
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 70 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 129
Query: 115 EEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 130 KSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Query: 169 RSQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV 226
+P + Q N+ R ++ N+ P + ++
Sbjct: 190 TRKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYC 225
Query: 227 GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDP 286
G S + +Q++ FG+I +++P + YSFV F + + A A + G
Sbjct: 226 GGIAS-GLTDQLMRQTFSPFGQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGTTIEGH 284
Query: 287 RITIMFSSSELAPGKDY 303
+ + KD+
Sbjct: 285 VVKCYWGKETPDTTKDF 301
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + +TT S+ + FV F DA+ A
Sbjct: 114 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVH 173
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 174 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 233
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 234 DQLMRQTFSPFGQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 293
Query: 171 QP 172
P
Sbjct: 294 TP 295
>gi|427796491|gb|JAA63697.1| Putative msx2-interacting protein, partial [Rhipicephalus
pulchellus]
Length = 4119
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L++GNL D T +L++ F +FG + ++ S+ S+AF+ + + A L G
Sbjct: 404 TLFIGNLEKDITTTELRKHFDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDG 463
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
+ N IK+ F + + P+ +W+ G+++ VS + L F ++G + ++ A V
Sbjct: 464 ENLGANRIKLGFGK-SMPTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALV 522
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ LE A A+ + GR +GG++L+VDF
Sbjct: 523 YFDSLECAQHAVAEMRGRVLGGKKLQVDF 551
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 28/179 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAA---- 72
+ V NL +TD LK+ LF ++ KVT + +A V FK+ ED + A
Sbjct: 303 ICVRNLPVRSTDTSLKDGLFHEYKKHGKVTVVKVIGQGTERYAVVCFKKPEDVEKALEVS 362
Query: 73 --------------KDALQGSDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEG 117
+ L G D P++ E K ++ L++G + + ++ EL +
Sbjct: 363 KDKLFFGCKIEVTSHEGLDGEDNEFRPLEAELDEYHPKATRTLFIGNLEKDITTTELRKH 422
Query: 118 FLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F +FG+I + K G+ AF++Y+ + +A++ ++G +G ++++ F +S P+
Sbjct: 423 FDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDGENLGANRIKLGFGKSMPT 481
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ +W+ ++ +D L FG++G + R A VYF +E A+ A ++G
Sbjct: 480 PTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALVYFDSLECAQHAVAEMRG 539
Query: 79 SDFRGNPIKIEFA-RPAKPSKHLWVGGISQTVSKEELEEGFL----KFGNIEDFKFLKDG 133
G ++++FA R + + + Q + + + EG +F I D +F +DG
Sbjct: 540 RVLGGKKLQVDFASRECQSAFFDKIEMSGQVLQNDRIWEGRRERRQEFDVIRDERFARDG 599
Query: 134 NTAFVE---YSRLE 144
+ YSR E
Sbjct: 600 RGVAFDGRGYSRYE 613
>gi|71003490|ref|XP_756415.1| hypothetical protein UM00268.1 [Ustilago maydis 521]
gi|46095793|gb|EAK81026.1| hypothetical protein UM00268.1 [Ustilago maydis 521]
Length = 2031
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 48/199 (24%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ LW+G+L T +DL +F ++G+++ V +S AF+ + + DA A++ + G
Sbjct: 540 PTRTLWIGHLRPTVTSSDLVHIFSRYGSIETVRLVPEKSCAFINYADLADAVRAREDVFG 599
Query: 79 --------------------------------------SDFRGNPIKIEFARPA------ 94
SD G P+ +
Sbjct: 600 RMNGRLGLGTIGPEGQVRVGFGKPESLPQAGFGLFATASDTTGAPLDAYTSEVVGTEGGN 659
Query: 95 -KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
+PS+ LW+G I + S E L F FG IE + L + AF+ Y RL+DA A + +
Sbjct: 660 QEPSRALWIGSIPSSTSIETLISIFAPFGPIESVRVLASKSCAFINYERLDDAMVARQTL 719
Query: 154 NGRQIGGEQL---RVDFLR 169
+GR + G +L R+ F +
Sbjct: 720 HGRDVLGAELGPVRIGFAK 738
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNIN 154
+P++ LW+G + TV+ +L F ++G+IE + + + + AF+ Y+ L DA A +++
Sbjct: 539 QPTRTLWIGHLRPTVTSSDLVHIFSRYGSIETVRLVPEKSCAFINYADLADAVRAREDVF 598
Query: 155 GRQ--------IGGE-QLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKR 205
GR IG E Q+RV F + E P + G SD A
Sbjct: 599 GRMNGRLGLGTIGPEGQVRVGF-----GKPESLPQAG-------FGLFATASDTTGAPLD 646
Query: 206 SHPQSSVG-RNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVE 264
++ VG + PS+ LW+G PS E ++ + FG IE ++ S++ +F+
Sbjct: 647 AYTSEVVGTEGGNQEPSRALWIGSIPSSTSIETLI-SIFAPFGPIESVRVLASKSCAFIN 705
Query: 265 FRSVDEARRAKEGLQGR 281
+ +D+A A++ L GR
Sbjct: 706 YERLDDAMVARQTLHGR 722
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
PS LW+G++ + T+ L +F FG ++ V +S+S AF+ ++R++DA A+ L G
Sbjct: 662 PSRALWIGSIPSSTSIETLISIFAPFGPIESVRVLASKSCAFINYERLDDAMVARQTLHG 721
Query: 79 SDFRG---NPIKIEFAR-PAKPS 97
D G P++I FA+ PA S
Sbjct: 722 RDVLGAELGPVRIGFAKVPANAS 744
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 136/320 (42%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 126
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 127 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 186
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQ--IGGEQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ E + V F
Sbjct: 187 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPSATEPITVKFANNPSQKTNQAILSQ 246
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G
Sbjct: 247 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHAGTGW 306
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 307 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 365
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 366 SLNGYRLGDRVLQVSFKTNK 385
>gi|427796441|gb|JAA63672.1| Putative msx2-interacting protein, partial [Rhipicephalus
pulchellus]
Length = 4054
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L++GNL D T +L++ F +FG + ++ S+ S+AF+ + + A L G
Sbjct: 349 TLFIGNLEKDITTTELRKHFDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDG 408
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
+ N IK+ F + + P+ +W+ G+++ VS + L F ++G + ++ A V
Sbjct: 409 ENLGANRIKLGFGK-SMPTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALV 467
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ LE A A+ + GR +GG++L+VDF
Sbjct: 468 YFDSLECAQHAVAEMRGRVLGGKKLQVDF 496
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 28/179 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAA---- 72
+ V NL +TD LK+ LF ++ KVT + +A V FK+ ED + A
Sbjct: 248 ICVRNLPVRSTDTSLKDGLFHEYKKHGKVTVVKVIGQGTERYAVVCFKKPEDVEKALEVS 307
Query: 73 --------------KDALQGSDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEG 117
+ L G D P++ E K ++ L++G + + ++ EL +
Sbjct: 308 KDKLFFGCKIEVTSHEGLDGEDNEFRPLEAELDEYHPKATRTLFIGNLEKDITTTELRKH 367
Query: 118 FLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F +FG+I + K G+ AF++Y+ + +A++ ++G +G ++++ F +S P+
Sbjct: 368 FDQFGDIIEIDIKKQGSASSYAFIQYADIASVVKAMRKLDGENLGANRIKLGFGKSMPT 426
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+ +W+ ++ +D L FG++G + R A VYF +E A+ A ++G
Sbjct: 425 PTMCVWLDGVTEMVSDKFLSRTFGRYGPVSFAVVDRERGHALVYFDSLECAQHAVAEMRG 484
Query: 79 SDFRGNPIKIEFA-RPAKPSKHLWVGGISQTVSKEELEEGFL----KFGNIEDFKFLKDG 133
G ++++FA R + + + Q + + + EG +F I D +F +DG
Sbjct: 485 RVLGGKKLQVDFASRECQSAFFDKIEMSGQVLQNDRIWEGRRERRQEFDVIRDERFARDG 544
Query: 134 NTAFVE---YSRLE 144
+ YSR E
Sbjct: 545 RGVAFDGRGYSRYE 558
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 61/294 (20%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFV 61
L+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 130
Query: 115 EEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 131 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 190
Query: 169 RSQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV 226
+P + Q N+ R ++ N+ P + ++
Sbjct: 191 TRKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYC 226
Query: 227 GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
G S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 227 GGIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 279
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 115 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 174
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 175 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 234
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 235 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 294
Query: 171 QP 172
P
Sbjct: 295 SP 296
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 275 VSVNGTTIEGHVVKCYWGK 293
>gi|255075981|ref|XP_002501665.1| predicted protein [Micromonas sp. RCC299]
gi|226516929|gb|ACO62923.1| predicted protein [Micromonas sp. RCC299]
Length = 667
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 23/180 (12%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKD 74
SN++V NLS D + LK +F KFGA++ V+T SSR F FV F +V A+AA
Sbjct: 31 SNVYVKNLSEDVDELTLKGVFDKFGAVESCCVIRDVSTNSSRGFGFVKFMQVHQAEAAIK 90
Query: 75 ALQGSDFRGNPIKIEFARP-----------AKPSKHLWVGGISQTVSKEELEEGFLKFGN 123
+ G RG ++++FA S +++V G+ ++ EL F FG
Sbjct: 91 EMNGKVIRGKVLEVKFANSDSSATTAASGVGTISDNIYVKGLPPLWTEVELRAFFKIFGT 150
Query: 124 IEDFKFLKDGNT----AFVEYSRLEDAAEALKNINGRQIGGEQ--LRVDFLRSQPSRREQ 177
I + + L T A + +S +E AA A+ NGR G Q L + F S R
Sbjct: 151 IIECRLLHASGTTTAGALIRFSSMEQAASAVVTANGRVPAGGQVPLVIRFADSHSKTRRS 210
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 52/337 (15%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRS 57
P + N D K +NL V L + T +LK LFG G + DK+T S
Sbjct: 26 PVESNNTEDSK-----TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLG 79
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEEL 114
+ FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T++++EL
Sbjct: 80 YGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKEL 139
Query: 115 EEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVD 166
E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 140 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVK 199
Query: 167 F---------------LRSQPSRREQWPNSHDAR----DGPIIGRGTGFSDNHSAYKRSH 207
F L P+RR P + A+ D + G S
Sbjct: 200 FANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGGIKSRFSPMAIDG 259
Query: 208 PQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRN 259
S G N G ++V Y + DE +L FG + +K + +
Sbjct: 260 MTSLAGINFPGHAGTGWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG 318
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 319 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKE+FGK+G V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPI-----------KIEFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G D G + + E R + K +L+V + + E L
Sbjct: 251 MNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ FL FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGRPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N + FV + E A A+ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKER 179
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A D +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ ++ E L+E F K+G
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D N FV + R EDA +A+ +NG+ + G+ + V + + R+ +
Sbjct: 220 VKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
+ FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|327271181|ref|XP_003220366.1| PREDICTED: ELAV-like protein 4-like [Anolis carolinensis]
Length = 410
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 142/333 (42%), Gaps = 57/333 (17%)
Query: 11 AYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYF 63
A DD + +NL V L + T + + LFG G + DK+T S + FV +
Sbjct: 84 ATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-QSLGYGFVNY 138
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLK 120
+DA+ A + L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F +
Sbjct: 139 IDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQ 198
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF----- 167
+G I + L D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 199 YGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPS 258
Query: 168 ----------LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP------QSS 211
L P+RR P H A+ R + KR P S
Sbjct: 259 QKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSPITIDGMTSL 314
Query: 212 VGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFV 263
VG N G ++V Y S DE +L FG + +K + + + FV
Sbjct: 315 VGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 373
Query: 264 EFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G D + + F +++
Sbjct: 374 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 406
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 62/295 (21%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFV 61
L+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK--------HLWVGGISQTVSKEE 113
F DA AA A+ G G +K+ +A K H++VG +S ++ E+
Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTED 130
Query: 114 LEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
++ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 131 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 190
Query: 168 LRSQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILW 225
+P + Q N+ R ++ N+ P + ++
Sbjct: 191 ATRKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVY 226
Query: 226 VGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
G S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 227 CGGIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 280
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 116 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 175
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 176 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 235
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 236 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 295
Query: 171 QP 172
P
Sbjct: 296 SP 297
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 216 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 275
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 276 VSVNGTTIEGHVVKCYWGK 294
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFG-KFGALD------KVTTYSSRSFAFVYFKRVED 68
E +++VG+L+AD TD L ELF K+ ++ T SR + FV F D
Sbjct: 192 EVVSDHSIFVGDLAADVTDEMLMELFASKYRSVKGAKVIIDANTGRSRGYGFVRFGEDSD 251
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAKPS-----------------KHLWVGGISQTVSK 111
A + G PI+I A P + + + ++VGG+ VS+
Sbjct: 252 KSRAMTEMNGVYCSTRPIRIGPATPRRTAGDSGSSTPGHSDGDSTNRTVYVGGLDPNVSE 311
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+EL + F K+G++ K + FV+Y DA EAL+ +NG IG + +R+ + RS
Sbjct: 312 DELRKSFAKYGDVASVKIPQGKQCGFVQYVNRTDAEEALQGLNGSVIGKQAVRLSWGRS- 370
Query: 172 PSRREQWPNSHDARDGPIIG 191
PS ++ +S + R+ G
Sbjct: 371 PSHKQPRGDSGNRRNNMYYG 390
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 127/326 (38%), Gaps = 69/326 (21%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSR------SFAFVYFKRVEDAKAAKDAL 76
+WVG+L + L FG G + + +R + FV F +A AL
Sbjct: 106 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFY---SHASADKAL 162
Query: 77 QGSDFRGN-------PIKIEFA-------RPAKPSKH-LWVGGISQTVSKEELEEGFL-K 120
Q +F G+ P K+ +A R S H ++VG ++ V+ E L E F K
Sbjct: 163 Q--NFTGHAMPNTDRPFKLNWASYSMGEKRSEVVSDHSIFVGDLAADVTDEMLMELFASK 220
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
+ +++ K + D NT FV + D + A+ +NG +R+
Sbjct: 221 YRSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCSTRPIRI--------- 271
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQM 234
GP R T D+ S S P S G D + G P+V
Sbjct: 272 ------------GPATPRRTA-GDSGS----STPGHSDG---DSTNRTVYVGGLDPNVSE 311
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
DE L + +G++ +K + FV++ + +A A +GL G + + + +
Sbjct: 312 DE--LRKSFAKYGDVASVKIPQGKQCGFVQYVNRTDAEEALQGLNGSVIGKQAVRLSWGR 369
Query: 295 SELAPGKDYPGSYSGTKGPRSEMFFG 320
S P P SG + R+ M++G
Sbjct: 370 S---PSHKQPRGDSGNR--RNNMYYG 390
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 50/273 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL ++ + LF + G++ K ++ +AFV F D A ALQ
Sbjct: 46 LYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGANDPYAFVEFL---DHSQASQALQTM 102
Query: 80 DFR---GNPIKIEFARP--AKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ R +K+ +A +PSK H++VG +S V ++L E F FG++ D
Sbjct: 103 NKRLLLDREMKVNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 162
Query: 128 KFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K ++D NT FV Y + E+A A++ +NG+ +G +R ++ +P +E+ +
Sbjct: 163 KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPTHY 222
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
++ I + +G DN S Y VG ++ DE +
Sbjct: 223 NEKSFDEIYNQTSG--DNTSVY----------------------VGNIANLSEDE--IRQ 256
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
A +G I ++ + + Y+FV+F + D A +A
Sbjct: 257 AFASYGRISEVRIFKMQGYAFVKFDNKDAAAKA 289
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 85/174 (48%), Gaps = 30/174 (17%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
++VG+LS++ + L+E F FG + T S+ + FV + + E+A+ A + +
Sbjct: 135 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 194
Query: 77 QGSDFRGNPIKIEFA--RPA---KPSKH------------------LWVGGISQTVSKEE 113
G I+ +A +P KP+ + ++VG I+ +S++E
Sbjct: 195 NGQWLGRRTIRTNWATRKPGDQEKPTHYNEKSFDEIYNQTSGDNTSVYVGNIA-NLSEDE 253
Query: 114 LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ + F +G I + + K AFV++ + AA+A+ +N +++GG+ +R +
Sbjct: 254 IRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSW 307
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKE+FGK+G V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPI-----------KIEFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G D G + + E R + K +L+V + + E L
Sbjct: 251 MNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ FL FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGRPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N + FV + E A A+ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKER 179
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A D +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ ++ E L+E F K+G
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D N FV + R EDA +A+ +NG+ + G+ + V + + R+ +
Sbjct: 220 VKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
+ FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 59/302 (19%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY------------------- 53
+D+ P + L+VGNLS D T+ + +LF + G
Sbjct: 2 EDESHPKT--LYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQ 59
Query: 54 --SSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGG 104
S+ + FV F DA AA A+ G G +K+ +A K H++VG
Sbjct: 60 QSSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGD 119
Query: 105 ISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQI 158
+S ++ E+++ F FG I D + +KD T FV + DA A+ ++ G+ +
Sbjct: 120 LSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWL 179
Query: 159 GGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDG 218
GG Q+R ++ +P P + +D + K+ + V N+
Sbjct: 180 GGRQIRTNWATRKP------PAPKNVQD--------------NGSKQLRFEDVV--NQSS 217
Query: 219 PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGL 278
P + ++ G S + E ++ FG+I I+ +P + YSF+ F S + A A +
Sbjct: 218 PQNCTVYCGGIQS-GLSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSV 276
Query: 279 QG 280
G
Sbjct: 277 NG 278
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + +TT S+ + FV F DA+ A
Sbjct: 114 HVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVH 173
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P SK L + GGI +S
Sbjct: 174 MGGQWLGGRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLS 233
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +F+ +S E AA A+ ++NG I ++ + +
Sbjct: 234 EHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKE 293
Query: 171 QP 172
P
Sbjct: 294 SP 295
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 140/309 (45%), Gaps = 37/309 (11%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 125
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 126 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 185
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRR------E 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 186 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKVNHTILS 244
Query: 177 QWPNSHDAR-DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPSVQ 233
Q S + R GP+ + FS S S G N G ++V Y +
Sbjct: 245 QLYQSPNRRYPGPLAQQAQRFS-RFSPMTIDGMTSLAGINFPGHAGTGWCIFV-YNLAPD 302
Query: 234 MDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPR 287
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 303 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 362
Query: 288 ITIMFSSSE 296
+ + F +S+
Sbjct: 363 LQVSFKTSK 371
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 146/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 270
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 271 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 329
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 330 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 381
>gi|432919034|ref|XP_004079712.1| PREDICTED: ELAV-like protein 2-like [Oryzias latipes]
Length = 389
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYVDPKDAEKAI 126
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 127 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 186
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + R +A EA+K +N ++ G E + V F
Sbjct: 187 VDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALLSQ 246
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G
Sbjct: 247 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMAIDGVTSLAGINIPGHAGTGW 306
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 307 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIA 365
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 366 SLNGYRLGDRVLQVSFKTNK 385
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 146/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 270
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 271 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 329
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 330 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 381
>gi|327290511|ref|XP_003229966.1| PREDICTED: RNA-binding protein 14-like [Anolis carolinensis]
Length = 607
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
Query: 22 NLWVGNLSADTTDADLKELFGKF--GALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
++VGN+ +T+ +L++LF GA+ KV + FAFV+ + A A L G
Sbjct: 6 KVFVGNVPEETSQVELRDLFQAVEPGAVLKVALM--KQFAFVHLRDEAAADRAIAKLNGQ 63
Query: 80 DFRGNPIKIEFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
G+ + +E +RP +P+ ++VG +S T + EL F +FG + + +KD AF
Sbjct: 64 LVHGHRVVVEHSRP-RPTHTVKIFVGNVSATCTSGELRALFQEFGPVVECDTVKD--YAF 120
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + EDAA A++++NGR++ G ++ V+
Sbjct: 121 VHMEKDEDAAAAIEHLNGREVKGRRINVEL 150
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF +FG + + T + +AFV+ ++ EDA AA + L G +
Sbjct: 84 KIFVGNVSATCTSGELRALFQEFGPVVECDTV--KDYAFVHMEKDEDAAAAIEHLNGREV 141
Query: 82 RGNPIKIEFARPA 94
+G I +E + A
Sbjct: 142 KGRRINVELSNKA 154
>gi|396472554|ref|XP_003839148.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
gi|312215717|emb|CBX95669.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
Length = 379
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVE 67
D +APP L++GNL + T L+ +F +FG ++ V SR F +V FK +
Sbjct: 184 DTSDAPPGRTLYIGNLYYEVTADQLQRVFSRFGEIENVKIIYDNRGLSRGFGYVEFKNIP 243
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPA-------------KPSKHLWVGGISQTVSKEEL 114
DA+ A D L F G + ++F R PSK L++G +S +S ++L
Sbjct: 244 DAQTAIDNLDMQVFEGRNLVVQFHREKPGFGKNNRANSTNSPSKTLFIGNMSFEMSDKDL 303
Query: 115 EEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ F + N+ D + D T A ++ + A A + + + G +LR+DF
Sbjct: 304 NDLFREVRNVVDVRVAIDRRTGQPRGFAHADFLDIASATHAKNILANKVVYGRELRIDF 362
Score = 43.5 bits (101), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 217 DGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY-----PSRNYSFVEFRSVDEA 271
D PP + L++G ++ L FGEIE +K SR + +VEF+++ +A
Sbjct: 187 DAPPGRTLYIGNL-YYEVTADQLQRVFSRFGEIENVKIIYDNRGLSRGFGYVEFKNIPDA 245
Query: 272 RRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGD 321
+ A + L ++F + + F + GK+ + T P +F G+
Sbjct: 246 QTAIDNLDMQVFEGRNLVVQFHREKPGFGKN--NRANSTNSPSKTLFIGN 293
>gi|221042398|dbj|BAH12876.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 138/323 (42%), Gaps = 53/323 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T + + LFG G + DK+T S + FV + +DA+ A
Sbjct: 12 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 70
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 71 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 130
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 131 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQ 190
Query: 168 LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHP------QSSVGRNRDGPPS 221
L P+RR P H A+ R + KR P S VG N G
Sbjct: 191 LYQSPNRRYPGPLHHQAQR----FRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTG 246
Query: 222 K--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARR 273
++V Y S DE +L FG + +K + + + FV + DEA
Sbjct: 247 TGWCIFV-YNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAM 305
Query: 274 AKEGLQGRLFNDPRITIMFSSSE 296
A L G D + + F +++
Sbjct: 306 AIASLNGYRLGDRVLQVSFKTNK 328
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 265
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 266 PSACSPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 324
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 325 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 376
>gi|358344177|ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
gi|355502103|gb|AES83306.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
Length = 824
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 61/280 (21%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDA 75
++VG L D T+ DL+++F + G + +V T ++ FAF+ F+ VE AK A
Sbjct: 216 EVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAE 275
Query: 76 LQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFG--NIEDFKFLKDG 133
L+ G + P++ S L++G I +T +KE L+E +G N+ED ++D
Sbjct: 276 LKNPVINGKQCGVT---PSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDS 332
Query: 134 NT-------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARD 186
N AF+E+S DA +A K + R V F +P++ + D D
Sbjct: 333 NDKGTNRGFAFLEFSSRSDAMDAFKRLQKRD-------VTFGVDKPAKVSFADSFIDPGD 385
Query: 187 GPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILF 246
+ T F D PPS DE + N + +
Sbjct: 386 EIMSQVKTVFID----------------------------ALPPS--WDEDYVRNLLKKY 415
Query: 247 GEIERI---KSYPS---RNYSFVEFRSVDEARRAKEGLQG 280
GE+E+I ++ P+ ++Y FV F S D A R + + G
Sbjct: 416 GEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITG 455
>gi|169626491|ref|XP_001806645.1| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
gi|160706106|gb|EAT76075.2| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
Length = 321
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAA 72
PP + L++GNL + T L+++F +FG + V SR F +V FK ++DA+ A
Sbjct: 126 PPHNTLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDNRGMSRGFGYVEFKSIDDAQTA 185
Query: 73 KDALQGSDFRGNPIKIEFAR-------------PAK-PSKHLWVGGISQTVSKEELEEGF 118
D L F G + +++ R PA PSK L++G +S +S ++L + F
Sbjct: 186 IDNLDMQVFEGRNLVVQYHRAKSDSDRPKREFPPANLPSKTLFIGNMSFEMSDKDLNDLF 245
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
N+ D + D T A ++ + A +A + ++ + I G +LRVDF RS
Sbjct: 246 RDIRNVNDVRVAIDRRTGQPRGFAHADFLDVASATKAKEILSAKTIYGRELRVDFSRS 303
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 51/214 (23%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEAL 150
P L++G + V+ E+L++ F +FG + K + D +VE+ ++DA A+
Sbjct: 127 PHNTLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDNRGMSRGFGYVEFKSIDDAQTAI 186
Query: 151 KNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS 210
N++ + G L V + R++ D P KR P +
Sbjct: 187 DNLDMQVFEGRNLVVQYHRAKSD-----------SDRP---------------KREFPPA 220
Query: 211 SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERI---------KSYPSRNYS 261
++ PSK L++G S +M ++ L++ LF +I + ++ R ++
Sbjct: 221 NL-------PSKTLFIGN-MSFEMSDKDLND---LFRDIRNVNDVRVAIDRRTGQPRGFA 269
Query: 262 FVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSS 295
+F V A +AKE L + + + FS S
Sbjct: 270 HADFLDVASATKAKEILSAKTIYGRELRVDFSRS 303
Score = 44.3 bits (103), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 7 KFNRAYDDKEAP---------PSSNLWVGNLSADTTDADLKELFGKFGALDKVT------ 51
+++RA D + P PS L++GN+S + +D DL +LF ++ V
Sbjct: 202 QYHRAKSDSDRPKREFPPANLPSKTLFIGNMSFEMSDKDLNDLFRDIRNVNDVRVAIDRR 261
Query: 52 TYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPA 94
T R FA F V A AK+ L G ++++F+R A
Sbjct: 262 TGQPRGFAHADFLDVASATKAKEILSAKTIYGRELRVDFSRSA 304
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 32/191 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKA 71
+P +N++V NLS TTD DLK +FGK+G++ S+ F FV F+ + A A
Sbjct: 648 SPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAA 707
Query: 72 AKDALQGSDFRGNPI------------------KIEFARPAKPSK----HLWVGGISQTV 109
A + L G+ F + + K E R K K +L++ + +V
Sbjct: 708 AVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSV 767
Query: 110 SKEELEEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
+ E+L+E F +FG I K + D + FV + E+A AL +NG+ IG + L
Sbjct: 768 NDEKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLY 827
Query: 165 VDFLRSQPSRR 175
V + + R+
Sbjct: 828 VAVAQRKEERK 838
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 64/292 (21%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY------SSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + L +LF + + + +S +A+V F +DA A
Sbjct: 472 NASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNAL 531
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + G PI+I F+ PS ++++ + ++ + L + F FG +
Sbjct: 532 EHLNFTPLNGKPIRIMFSH-RDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSC 590
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D N FV++ + E A A+K +NG I +Q+ V F+R
Sbjct: 591 KIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVR------------ 638
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
H R+ RG G + Y ++ +++ + L N
Sbjct: 639 HQERN-----RGNGSPKFTNVYVKNLSETTTDDD-----------------------LKN 670
Query: 242 AMILFGEIE-----RIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
+G I R S S+ + FV F+S D A A E L G FND ++
Sbjct: 671 IFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKV 722
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 135/320 (42%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYVDPKDAEKAI 125
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 126 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 185
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQ--IGGEQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ E + V F
Sbjct: 186 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPSAAEPITVKFANNPSQKTNQAILSQ 245
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L PSRR P + A R ++ G S G N G
Sbjct: 246 LYHSPSRRYPAPLAQQAQRFRLDNLLNMAYGVKSRFPPMTIDGMTSLAGINIPGHAGTGW 305
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 306 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 364
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 365 SLNGYRLGDRVLQVSFKTNK 384
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPI-------------IGRGTGFSDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + + NH+AY +P S + R R
Sbjct: 372 EERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVTQTQNHAAY---YPPSQIARLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 51/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P+++L+VG+L D T+A L E F G + D +T+ SS ++A+V F+ +DA+
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQHTKDAEH 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
A D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNIL 126
Query: 126 DFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ D N + FV + E A A+K +NG + G ++ F+ SR+E
Sbjct: 127 SCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKV---FVGQFKSRKE----- 178
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 ---REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV------- 220
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR+ Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|351709080|gb|EHB11999.1| Msx2-interacting protein [Heterocephalus glaber]
Length = 3566
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ F +FG + + +AF+ + + A +
Sbjct: 348 TRTLFIGNLEKTTTYHDLRNTFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 407
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 408 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVIKVVFDRLKGMA 466
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ Y+ +E A A+K GR+IGG +++VDF
Sbjct: 467 LILYNEIEYAQAAVKETKGRKIGGNKIKVDF 497
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 42/204 (20%)
Query: 28 LSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDALQGSDF 81
L+A D LK+ LF +F KVT+ S + V+F++ ED + A A +G F
Sbjct: 253 LAASQHDTSLKDGLFHEFKKFGKVTSVQIHGASEERYGLVFFRQQEDQEKALTASKGKLF 312
Query: 82 RGNPIKI------------EFARP---------AKPSKHLWVGGISQTVSKEELEEGFLK 120
G I++ EF RP K ++ L++G + +T + +L F +
Sbjct: 313 FGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNTFQR 371
Query: 121 FGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR--- 174
FG I D K AF++Y + +A+K ++G +G +L++ F +S P+
Sbjct: 372 FGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTNCVW 431
Query: 175 --------REQWPNSHDARDGPII 190
+Q+ H R GP+I
Sbjct: 432 LDGLSSNVSDQYLTRHFCRYGPVI 455
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A + + +E A+AA +G
Sbjct: 426 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVIKVVFDRLKGMALILYNEIEYAQAAVKETKG 485
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 486 RKIGGNKIKVDFA 498
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 41/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + FS S S G N G ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFS-RFSPMTIDGMTSLAGINIPGHAGTGWCIFV-YNLA 272
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 273 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 332
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 333 RVLQVSFKTNK 343
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 32/193 (16%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSF 58
P+K RA DD E ++N++VG LS + + LK F G + + SR F
Sbjct: 179 PAKKARA-DDGEEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGF 237
Query: 59 AFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKP------------------SKHL 100
+V F +E A A GS+ G I++ +A KP ++ L
Sbjct: 238 GYVEFADLE-ASAKAIEKDGSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDKQSPPAETL 296
Query: 101 WVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNIN 154
W+G +S +V+++++ E F + G+++ + D +T +V++S +EDA+ ALK +N
Sbjct: 297 WIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMN 356
Query: 155 GRQIGGEQLRVDF 167
G +I G +RVDF
Sbjct: 357 GAEIAGRAIRVDF 369
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 7 KFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAF 60
K + ++DK++PP+ LW+G+LS T+ + E FG+ G + V T + + F +
Sbjct: 280 KRAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGY 339
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFARP 93
V F VEDA AA A+ G++ G I+++FA P
Sbjct: 340 VQFSSVEDASAALKAMNGAEIAGRAIRVDFAPP 372
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 93/209 (44%), Gaps = 43/209 (20%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEAL 150
+ +++VG +S V + L+ F G + + + D ++ +VE++ LE +A+A+
Sbjct: 193 TTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAKAI 252
Query: 151 KNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQS 210
+ +G +I G +RV++ T N +A KR+
Sbjct: 253 EK-DGSEIDGRAIRVNY-------------------------ATQRKPNEAAEKRAK--- 283
Query: 211 SVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRN------YSFVE 264
V ++ PP++ LW+G S + E ++ A G+++ ++ R+ + +V+
Sbjct: 284 -VFNDKQSPPAETLWIGS-LSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQ 341
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITIMFS 293
F SV++A A + + G I + F+
Sbjct: 342 FSSVEDASAALKAMNGAEIAGRAIRVDFA 370
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 115/270 (42%), Gaps = 37/270 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL T+ L LFG+ G + + +AF+ F A A A+
Sbjct: 10 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVTALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P K H++VG +S + L E F FG I + + ++
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + DA A++ +NG+ +G +R ++ +P +
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK---------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRS-HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
G ++ + KR+ P N+ P + ++ G S + E+++ N
Sbjct: 180 ---------GVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFS 230
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
FG+I+ I+ + + Y+F+ F + + A A
Sbjct: 231 QFGQIQDIRVFRDKGYAFIRFTTKEAAAHA 260
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 36/180 (20%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + DA+AA A
Sbjct: 97 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 156
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----------------------------HLWVGGIS 106
+ G I+ ++ P+K ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFT 216
Query: 107 QTVSKEEL-EEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ EEL + F +FG I+D + +D AF+ ++ E AA A+ + +I G ++
Sbjct: 217 SNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKC 276
>gi|194766417|ref|XP_001965321.1| GF20711 [Drosophila ananassae]
gi|190617931|gb|EDV33455.1| GF20711 [Drosophila ananassae]
Length = 5735
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 744 LFIGNLEKDITAGELRGHFEGFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 803
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 804 LGSNRIKLGFGK-SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRNRQLALVLY 862
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + G +L+VDF
Sbjct: 863 DQVQNAQAAVKDMRGTIMRGRKLQVDF 889
>gi|380021805|ref|XP_003694747.1| PREDICTED: RNA-binding protein lark-like [Apis florea]
Length = 351
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ TT+AD+K LF K+G + V +++ FV+ + E + A L G
Sbjct: 12 IFIGNLADKTTNADIKPLFEKYGKV--VECDVVKNYGFVHMENEEAGRNAIQNLNGHIVH 69
Query: 83 GNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G IK E A+ P P+ ++VG ++ ++ E F K+G + + ++ N FV
Sbjct: 70 GQEIKCEAAKSRKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVR--NYGFV 127
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
D +A+K +NGR + G+ ++V SR Q P D GRG +S
Sbjct: 128 HLEATGDVNDAIKELNGRMVDGQAMKVQI---STSRVRQRPGMGDPEQCYRCGRGGHWS 183
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKE FG++GA V + SR F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDD 250
Query: 76 LQGSDFRGNPI-----------KIEFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G D G I + E R + K +L+V + + E L
Sbjct: 251 MNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFTPFGSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N + FV + E A A+ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKER 179
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPIIG----RG--TGF-------SDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + R +G+ + NH+AY +P S + R R
Sbjct: 372 EERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAY---YPPSQIARLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 51/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P+++L+VG+L D T+A L E F G + D +T+ SS ++A+V F+ +DA+
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQHTKDAEH 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
A D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNIL 126
Query: 126 DFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ D N + FV + E A A+K +NG + G ++ F+ SR+E
Sbjct: 127 SCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKV---FVGQFKSRKE----- 178
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 ---REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV------- 220
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR+ Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPIIG----RG--TGF-------SDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + R +G+ + NH+AY +P S + R R
Sbjct: 372 EERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAY---YPPSQIARLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 51/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P+++L+VG+L D T+A L E F G + D +T+ SS ++A+V F+ +DA+
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQHTKDAEH 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
A D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNIL 126
Query: 126 DFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ D N + FV + E A A+K +NG + G ++ F+ SR+E
Sbjct: 127 SCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKV---FVGQFKSRKE----- 178
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 ---REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV------- 220
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR+ Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|307187784|gb|EFN72750.1| RNA-binding protein lark [Camponotus floridanus]
Length = 331
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ T++AD+K LF K+G + V +++ FV+ + E + A L G
Sbjct: 12 IFIGNLADKTSNADIKPLFEKYGKV--VECDVVKNYGFVHMENEEAGRNAIQNLNGHMVH 69
Query: 83 GNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G PIK E A+ P P+ ++VG ++ ++ E F K+G + + ++ N FV
Sbjct: 70 GQPIKCEAAKSRKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVR--NYGFV 127
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
D +A+K +NG+ + G+ ++V SR Q P D GRG +S
Sbjct: 128 HLEATGDVNDAIKELNGQIVDGQPMKVQI---STSRVRQRPGMGDPEQCYRCGRGGHWS 183
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ ++VGNL+ +T ++ELF K+G + V R++ FV+ + D A L G
Sbjct: 87 PTTKIFVGNLTDNTKAPQVRELFAKYGTV--VECDIVRNYGFVHLEATGDVNDAIKELNG 144
Query: 79 SDFRGNPIKIEFA 91
G P+K++ +
Sbjct: 145 QIVDGQPMKVQIS 157
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 30/198 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F++ EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDAIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + E L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPI 189
R+ N + R +
Sbjct: 372 EERQAYLTNEYMQRKASV 389
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F + G V T S ++A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAEHA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGN+
Sbjct: 69 LDTMNFDVIKGKPLRIMWSQ-RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPTLSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYV 263
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 106/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFGTREAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GIPLNDCKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + + EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR Q R + ++ D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDAI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ T++ DLK +FG+FG + V S+ F FV F+ +DA + +A
Sbjct: 208 NNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEA 267
Query: 76 LQGSDFRGN---------------PIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G G +K F + K + +L+V + ++ ++L
Sbjct: 268 LNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKL 327
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG I K ++D N + FV +S E+AA AL +NGR I + L V +
Sbjct: 328 KELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQ 387
Query: 170 SQPSR 174
+ R
Sbjct: 388 RKEDR 392
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TD+ L +LF + G + V T+ S + +V + DA A
Sbjct: 28 TTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRAL 87
Query: 74 DALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
D L + GNPI++ ++ S ++++ + + + + L + F FG+I K
Sbjct: 88 DVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCK 147
Query: 129 FLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D + FV++ E A +A++ +NG + +Q+ V FLR Q
Sbjct: 148 VATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSEKTKF 207
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+ + T D + + P +SV RDG
Sbjct: 208 NNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDG------------------------ 243
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGR 281
S+ + FV F + D+A R+ E L G+
Sbjct: 244 -----------EGKSKCFGFVNFENADDAARSVEALNGK 271
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 51/288 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKD 74
S N+++ NL L + F FG++ KV T SS + F FV F E A A +
Sbjct: 116 SGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIE 175
Query: 75 ALQGSDFRGNPI-------KIEFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + K E ++ +K +++V +++T S+E+L+ F +FG I
Sbjct: 176 KLNGMLLNDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPIT 235
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++DG FV + +DAA +++ +NG+++ G++ W
Sbjct: 236 SVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGKE---------------W-- 278
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
+G+ S+ K S + SV D L+V +D+ L
Sbjct: 279 --------YVGKAQKKSEREVELK-SRFEQSVKEAADKYQGANLYVKNLDD-SIDDDKLK 328
Query: 241 NAMILFGEIERIKSYP-----SRNYSFVEFRSVDEARRAKEGLQGRLF 283
FG I K SR FV F S +EA RA + GR+
Sbjct: 329 ELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMI 376
>gi|328786023|ref|XP_623841.3| PREDICTED: RNA-binding protein lark-like isoform 1 [Apis mellifera]
Length = 356
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ TT+AD+K LF K+G + V +++ FV+ + E + A L G
Sbjct: 12 IFIGNLADKTTNADIKPLFEKYGKV--VECDVVKNYGFVHMENEEAGRNAIQNLNGHIVH 69
Query: 83 GNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G IK E A+ P P+ ++VG ++ ++ E F K+G + + ++ N FV
Sbjct: 70 GQEIKCEAAKSRKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVR--NYGFV 127
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
D +A+K +NGR + G+ ++V SR Q P D GRG +S
Sbjct: 128 HLEATGDVNDAIKELNGRMVDGQAMKVQI---STSRVRQRPGMGDPEQCYRCGRGGHWS 183
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A+K +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIKKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 142/337 (42%), Gaps = 52/337 (15%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRS 57
P + N D K +NL V L + T +LK LFG G + DK+T S
Sbjct: 55 PVESNNTEDSK-----TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLG 108
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEEL 114
+ FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T++++EL
Sbjct: 109 YGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKEL 168
Query: 115 EEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVD 166
E+ F ++G I + L D T F+ + + +A EA+K +NG++ G E + V
Sbjct: 169 EQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVK 228
Query: 167 F---------------LRSQPSRREQWPNSHDAR----DGPIIGRGTGFSDNHSAYKRSH 207
F L P+RR P + A+ D + G S
Sbjct: 229 FANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGGIKSRFSPMAIDG 288
Query: 208 PQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRN 259
S G N G ++V Y + DE +L FG + +K + +
Sbjct: 289 MTSLAGINFPGHAGTGWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG 347
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G D + + F +S+
Sbjct: 348 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 384
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAA 72
E+ P + L+VGNL + ++ L LF G + + +AF+ + + A A
Sbjct: 3 ESQPKT-LYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTA 61
Query: 73 KDALQGSDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNI 124
A+ F IK+ +A P K H++VG +S + E L E F FG I
Sbjct: 62 LTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEI 121
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQ 177
+ + ++D +T AFV + + +A A++ +NG+ IG +R ++ R P RE
Sbjct: 122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREP 181
Query: 178 WPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQ 237
+ Y +S P ++ + G+PP+V D+
Sbjct: 182 ----------------SKXXXXXEVYNQSSPTNTT----------VYCGGFPPNVISDD- 214
Query: 238 MLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
++H + FG I+ ++ + + +SF++F + + A A E
Sbjct: 215 LMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 253
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 28/172 (16%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + +A+ A A
Sbjct: 96 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQA 155
Query: 76 LQGSDFRGNPIKIEFAR-----PAKPSKH----------------LWVGGIS-QTVSKEE 113
+ G I+ ++ P +PSK ++ GG +S +
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKXXXXXEVYNQSSPTNTTVYCGGFPPNVISDDL 215
Query: 114 LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ + F++FG I+D + KD +F+++ E AA A+++ + ++ G ++
Sbjct: 216 MHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKC 267
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 115/270 (42%), Gaps = 37/270 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL T+ L LFG+ G + + +AF+ F A A A+
Sbjct: 10 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVTALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P K H++VG +S + L E F FG I + + ++
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + DA A++ +NG+ +G +R ++ +P +
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK---------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRS-HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
G ++ + KR+ P N+ P + ++ G S + E+++ N
Sbjct: 180 ---------GVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFS 230
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
FG+I+ I+ + + Y+F+ F + + A A
Sbjct: 231 QFGQIQDIRVFRDKGYAFIRFTTKEAAAHA 260
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 36/180 (20%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + DA+AA A
Sbjct: 97 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 156
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----------------------------HLWVGGIS 106
+ G I+ ++ P+K ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFT 216
Query: 107 QTVSKEEL-EEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ EEL + F +FG I+D + +D AF+ ++ E AA A+ + +I G ++
Sbjct: 217 SNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKC 276
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 128/288 (44%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V +SQ
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQ----------- 176
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 177 KEREAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 138/311 (44%), Gaps = 42/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFR--FSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 271
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 272 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 331
Query: 286 PRITIMFSSSE 296
+ F +++
Sbjct: 332 RVLQXSFKTNK 342
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|45387723|ref|NP_991217.1| uncharacterized protein LOC402952 [Danio rerio]
gi|41351185|gb|AAH65633.1| Zgc:77262 [Danio rerio]
Length = 331
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
++VGN+++ TT+ +L+ LF K+GA+ +++ FV+ E A+ A AL +
Sbjct: 4 IFVGNVASATTEDELRALFEKYGAVSDCDIL--KNYGFVHMDEEEAAQKAVSALHKHEVN 61
Query: 83 GNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
G+ I +E+A + + ++VG + + V+ +++E F FG + + +K N AFV
Sbjct: 62 GSRITVEYATTKVRNATKIYVGNVPEGVAAAKIKELFQPFGKVVECDIVK--NYAFVHMQ 119
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
R +A +A+ +N ++ G+++ V RS PSR
Sbjct: 120 RENEALDAIAKLNHSKVDGQKIFVSLSRSNPSR 152
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 129/288 (44%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ + S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 127 FKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D G + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|391342872|ref|XP_003745739.1| PREDICTED: uncharacterized protein LOC100905200 [Metaseiulus
occidentalis]
Length = 4516
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
L++GNL D T ++L++ F FG + D S S+AF+ + + A L G
Sbjct: 124 LFIGNLEKDITTSELRKHFESFGEIIEIDIKKQASLSSYAFIQYSDIASVVKAMRKLDGE 183
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+ N IK+ F + + P+ +W+ GI+ TV+++ L F ++G + ++ A V
Sbjct: 184 NLGANRIKLGFGK-SMPTMCVWLDGIADTVNEKFLTRQFSRYGTVTYTVIDRERGHALVY 242
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ L+ A A+ + GR + G++L+VDF
Sbjct: 243 FDSLDCAQHAVSEMRGRALNGKRLQVDF 270
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 118/304 (38%), Gaps = 79/304 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAK------ 70
+ V NL +TD LK+ LF ++ KVT + +A V FK+ ED +
Sbjct: 22 ICVRNLPVRSTDTSLKDGLFHEYKKHGKVTVVKVIGQGTDRYAVVCFKKPEDVEKALEVS 81
Query: 71 ------------AAKDALQGSDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEG 117
A + L G D P++ E K ++ L++G + + ++ EL +
Sbjct: 82 KDKLFFGCKIEVKAHEGLDGEDNEFRPLEAELDEYNPKATRTLFIGNLEKDITTSELRKH 141
Query: 118 FLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
F FG I + K + AF++YS + +A++ ++G +G ++++ F +S P
Sbjct: 142 FESFGEIIEIDIKKQASLSSYAFIQYSDIASVVKAMRKLDGENLGANRIKLGFGKSMP-- 199
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQ 233
+ +W+ G +V
Sbjct: 200 ----------------------------------------------TMCVWLDGIADTV- 212
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
+E+ L +G + R ++ V F S+D A+ A ++GR N R+ + F+
Sbjct: 213 -NEKFLTRQFSRYGTVTYTVIDRERGHALVYFDSLDCAQHAVSEMRGRALNGKRLQVDFA 271
Query: 294 SSEL 297
S E
Sbjct: 272 SREC 275
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG---ALDKVTTYSSRS--FAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG +++ +T S +S F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVELMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPIIG----RG--TGF-------SDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + R +G+ + NH+AY +P S + R R
Sbjct: 372 EERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAY---YPPSQIARLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 134/289 (46%), Gaps = 51/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P+++L+VG+L D T+A L E F G + D +T+ SS ++A+V F+ +DA+
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQHTKDAEH 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
A D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNIL 126
Query: 126 DFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ D N + FV + E A A+K +NG + G ++ F+ SR+E
Sbjct: 127 SCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKV---FVGQFKSRKE----- 178
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 ---REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV------- 220
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
E+ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ------ELMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 107/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VELMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR+ Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|261330753|emb|CBH13738.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 666
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 10 RAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYF 63
R D E SNL++ L TD+ L ELF FG+++ + T SR AFV F
Sbjct: 261 RVPDCSEDAIRSNLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKF 320
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEFA------RPAKPSKHLWVGGISQTVSKEELEEG 117
R+ DA+ A +AL GS F G I + A RP P+ +V + + KE+L
Sbjct: 321 VRLCDAQRAVEALNGSIFCGETITVRVAKPNAAYRPGAPTNKTFVRNVPLSAKKEDLVSH 380
Query: 118 FLKFGNIEDFKFLKDG---------NTAFVEYSRLEDAAEALKNIN 154
F K+G + + D N F+ Y+ E AA A + +
Sbjct: 381 FSKYGQVVEVSIHGDTAQCSTNKKRNVVFITYTTKEAAAWAAQQTH 426
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 99 HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKN 152
+L++ G+ +V+ L E F FG+IE K + D +T AFV++ RL DA A++
Sbjct: 273 NLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKFVRLCDAQRAVEA 332
Query: 153 INGRQIGGEQLRVDFLRSQPSRREQWP-NSHDARDGPIIGRGTGFSDNHSAY 203
+NG GE + V + + R P N R+ P+ + + S Y
Sbjct: 333 LNGSIFCGETITVRVAKPNAAYRPGAPTNKTFVRNVPLSAKKEDLVSHFSKY 384
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPIIG----RG--TGF-------SDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + R +G+ + NH+AY +P S + R R
Sbjct: 372 EERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAY---YPPSQIARLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 51/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P+++L+VG+L D T+A L E F G + D +T+ SS ++A+V F+ +DA+
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSS-NYAYVNFQHTKDAEH 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
A D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNIL 126
Query: 126 DFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ D N + FV + E A A+K +NG + G ++ F+ SR+E
Sbjct: 127 SCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKV---FVGQFKSRKE----- 178
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 ---REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV------- 220
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR+ Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 18 PPS---SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVED 68
PPS ++L+VG+LS D T+A L E+F G + + T S +A+V + + D
Sbjct: 10 PPSFSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLAD 69
Query: 69 AKAAKDALQGSDFRGNPIKIEFARP-----AKPSKHLWVGGISQTVSKEELEEGFLKFGN 123
A+ A D L ++ +G P ++ ++ + +++V + +T+ + L + F FGN
Sbjct: 70 AERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGN 129
Query: 124 IEDFK-----FLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I K F K N FV Y E A EA++ +NG Q+G + + V + R
Sbjct: 130 ILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSER---- 185
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQMDEQ 237
T F++ L+V +P +V E
Sbjct: 186 -----------ATNDTKFTN-------------------------LYVKNFPDTVT--EA 207
Query: 238 MLHNAMILFGEIER--IKS-YPSRNYSFVEFRSVDEARRAKEGLQGR 281
L +GEI +KS +R + F+ + D AR A E L G+
Sbjct: 208 HLKQLFSPYGEITSMIVKSDNKNRKFCFINYSDADSARNAMENLNGK 254
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
+ N++V NL + L + F FG + KV T S+++ FV+++ E AK A +
Sbjct: 103 TGNIFVKNLDKTIDNKALFDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIE 162
Query: 75 ALQGSDFRGNPI-------KIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ G + K E A +L+V TV++ L++ F +G I
Sbjct: 163 KVNGMQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITSM 222
Query: 128 KFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
D F+ YS + A A++N+NG++I E ++D+
Sbjct: 223 IVKSDNKNRKFCFINYSDADSARNAMENLNGKKI-TEDGKIDY 264
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS---SRSFAFVYFKRVEDAKAAKDALQ 77
+NL+V N T+A LK+LF +G + + S +R F F+ + + A+ A + L
Sbjct: 193 TNLYVKNFPDTVTEAHLKQLFSPYGEITSMIVKSDNKNRKFCFINYSDADSARNAMENLN 252
Query: 78 GS--------DFRGNPIKIEFARPA 94
G D+ +P K E +PA
Sbjct: 253 GKKITEDGKIDYNYDPKKEETEKPA 277
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|296203566|ref|XP_002748951.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Callithrix
jacchus]
Length = 604
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N++V N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 159 TNVYVKNFGEDMDDEHLKDLFGKFGPTLSVKVMTDERGKSKGFGFVSFERGEDAQKAVDE 218
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
L G + G I + E R + K +L+V + + E L
Sbjct: 219 LNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDKITRYQGLNLYVKYLDDYIDDERL 278
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NG+ + + L V +
Sbjct: 279 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGKIVATKPLYVALAQR 338
Query: 171 QPSRREQWPNSHDARDGPI 189
+ R+ N H R +
Sbjct: 339 KEERQAHLTNEHMHRTASV 357
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 47/248 (18%)
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKI-----------EFARPAKPSKHLWVG 103
S+ + FV+F+ E A+ A + + G + + E AK +++V
Sbjct: 105 SKGYGFVHFETQEAAERAIEKMNGMLLNDQKVFVGRFKSRKEREAELGARAKEFTNVYVK 164
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQI 158
+ + E L++ F KFG K + D G + FV + R EDA +A+ +NG+++
Sbjct: 165 NFGEDMDDEHLKDLFGKFGPTLSVKVMTDERGKSKGFGFVSFERGEDAQKAVDELNGKEL 224
Query: 159 GGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDG 218
G+Q+ V + + R+ + + I R G +
Sbjct: 225 SGKQIYVGRAQKKVERQTELKRKFEQMKQDKITRYQGLN--------------------- 263
Query: 219 PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY----PSRNYSFVEFRSVDEARRA 274
L+V Y +D++ L FG I K S+ + FV F S +EA +A
Sbjct: 264 -----LYVKYLDDY-IDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKA 317
Query: 275 KEGLQGRL 282
+ G++
Sbjct: 318 VTEMNGKI 325
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 61/278 (21%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F+ +DA+ A
Sbjct: 9 PMTSLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMFTRRSSGYAYVNFQHPKDAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
D + G ++I +++ PS L G+ V E +G+
Sbjct: 69 LDTMNFDVINGKSVRIMWSQ-RDPS--LRKSGV---VCDENGSKGY-------------- 108
Query: 133 GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGR 192
FV + E A A++ +NG + +++ V + SR+E R+ + R
Sbjct: 109 ---GFVHFETQEAAERAIEKMNGMLLNDQKVFVGRFK---SRKE--------REAELGAR 154
Query: 193 GTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERI 252
F++ + + G + D K L+ + P++ + +++ + ER
Sbjct: 155 AKEFTNVYV--------KNFGEDMDDEHLKDLFGKFGPTLSV--KVMTD--------ERG 196
Query: 253 KSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
K S+ + FV F ++A++A + L G+ + +I +
Sbjct: 197 K---SKGFGFVSFERGEDAQKAVDELNGKELSGKQIYV 231
>gi|403221305|dbj|BAM39438.1| polyadenylate-binding protein [Theileria orientalis strain
Shintoku]
Length = 656
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 19/187 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
S++L+VG+L D T+A L E+F G + + T S +A+V + +DA+AA
Sbjct: 26 SASLYVGDLQPDVTEAVLYEVFNTIGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAEAAL 85
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + +G+P +I ++ PS +++V + +++ + L + F FG I
Sbjct: 86 ENLNYIEIKGHPTRIMWSN-RDPSLRKSGAGNIFVKNLDKSIDTKSLYDTFAHFGTILSC 144
Query: 128 KFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D A FV Y E A EA++ +NG IGG+++ V FLR Q E+ +
Sbjct: 145 KVAVDSTGASRRYGFVHYESEESAREAIEKVNGMLIGGKKVEVAPFLRKQDRETEEVYTN 204
Query: 182 HDARDGP 188
R+ P
Sbjct: 205 LYVRNFP 211
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 43/257 (16%)
Query: 8 FNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS---RSFAFVYFK 64
F R D + +NL+V N AD + L++ K+G + + R FAFV +K
Sbjct: 190 FLRKQDRETEEVYTNLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKGRRFAFVNYK 249
Query: 65 RVEDAKAAKDAL------QGSD-----------FRGNPIKIEFARPA------KPSKHLW 101
AK L + SD R N +K +F+ + + + +L+
Sbjct: 250 EASVAKEVVTTLNDLKLEEASDPLLVCPHQDKVKRQNMLKAQFSTVSPGQDDKRLTSNLY 309
Query: 102 VGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGR 156
+ + T L E F +FG I K + D N FV +S ++A +A+ ++ +
Sbjct: 310 IKNLDDTFDDASLGELFKQFGTITSSKVMLDANNNSRGFGFVCFSNPQEATKAIAAMHLK 369
Query: 157 QIGGEQLRVDFLRSQPSRREQWPNSHDARDG-PIIGRGTGFSDNHSA-YKRSHPQSSVGR 214
+ G+ L V +R+Q R G R FSD S Y+R P V
Sbjct: 370 LVKGKPLYVGL----AEKRDQRLMRMQQRRGFEPHARDLMFSDPQSMYYQRQFPGVVVPN 425
Query: 215 NRDGPPSKILWVGYPPS 231
N PPSK +PP+
Sbjct: 426 NV--PPSK----KFPPN 436
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 142/327 (43%), Gaps = 49/327 (14%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKD 302
++ +S S+ + FV F ++A++A + + G+ N +I + + ++ +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Query: 303 YPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+ K R + G + LD
Sbjct: 276 LKRKFEQMKQDRITRYQGVNLYVKNLD 302
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 142/327 (43%), Gaps = 49/327 (14%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKD 302
++ +S S+ + FV F ++A++A + + G+ N +I + + ++ +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Query: 303 YPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+ K R + G + LD
Sbjct: 276 LKRKFEQMKQDRITRYQGVNLYVKNLD 302
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 265
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 266 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 324
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 325 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 376
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 265
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 266 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 324
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 325 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 376
>gi|72393389|ref|XP_847495.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359593|gb|AAX80026.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803525|gb|AAZ13429.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 666
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 10 RAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYF 63
R D E SNL++ L TD+ L ELF FG+++ + T SR AFV F
Sbjct: 261 RVPDCSEDAIRSNLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKF 320
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEFA------RPAKPSKHLWVGGISQTVSKEELEEG 117
R+ DA+ A +AL GS F G I + A RP P+ +V + + KE+L
Sbjct: 321 VRLCDAQRAVEALNGSIFCGETITVRVAKPNAAYRPGAPTNKTFVRNVPLSAKKEDLVSH 380
Query: 118 FLKFGNIEDFKFLKDG---------NTAFVEYSRLEDAAEALKNIN 154
F K+G + + D N F+ Y+ E AA A + +
Sbjct: 381 FSKYGQVVEVSIHGDTAQCSTNKKRNVVFITYTTKEAAAWAAQQTH 426
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 99 HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKN 152
+L++ G+ +V+ L E F FG+IE K + D +T AFV++ RL DA A++
Sbjct: 273 NLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKFVRLCDAQRAVEA 332
Query: 153 INGRQIGGEQLRVDFLRSQPSRREQWP-NSHDARDGPIIGRGTGFSDNHSAY 203
+NG GE + V + + R P N R+ P+ + + S Y
Sbjct: 333 LNGSIFCGETITVRVAKPNAAYRPGAPTNKTFVRNVPLSAKKEDLVSHFSKY 384
>gi|20197865|gb|AAM15289.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 803
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV-TTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PS L+V N+++ D++L LF FG + + T SR F + + + A AA ALQ
Sbjct: 183 PSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQ 242
Query: 78 GSDFRGNPIKIEFARPAK-PSKH------LWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ R + I F+ P + PS+ L + + TVS +EL + F +G I + +
Sbjct: 243 NTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTVSNDELLQLFGAYGEIREIRET 302
Query: 131 KDGN-TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
+ F+EY + DA ALK +N +IGG+ ++++ R +RR P
Sbjct: 303 PNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELSRPGGARRLSVP 352
>gi|307195687|gb|EFN77529.1| RNA-binding protein lark [Harpegnathos saltator]
Length = 325
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ T++AD+K LF K+G + V +++ FV+ + E + A L G
Sbjct: 12 IFIGNLADKTSNADIKPLFEKYGKV--VECDVVKNYGFVHMENEEAGRNAIQNLNGHMVH 69
Query: 83 GNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G PIK E A+ P P+ ++VG ++ ++ E F K+G + + ++ N FV
Sbjct: 70 GQPIKCEAAKSRKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVR--NYGFV 127
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
D +A+K +NG+ + G+ ++V SR Q P D GRG +S
Sbjct: 128 HLEATGDVNDAIKELNGQIVDGQPMKVQI---STSRVRQRPGMGDPEQCYRCGRGGHWS 183
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ ++VGNL+ +T ++ELF K+G + V R++ FV+ + D A L G
Sbjct: 87 PTTKIFVGNLTDNTKAPQVRELFAKYGTV--VECDIVRNYGFVHLEATGDVNDAIKELNG 144
Query: 79 SDFRGNPIKIEFA 91
G P+K++ +
Sbjct: 145 QIVDGQPMKVQIS 157
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 142/327 (43%), Gaps = 49/327 (14%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKD 302
++ +S S+ + FV F ++A++A + + G+ N +I + + ++ +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Query: 303 YPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+ K R + G + LD
Sbjct: 276 LKRKFEQMKQDRITRYQGVNLYVKNLD 302
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 31 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 85
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 86 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 145
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 146 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 205
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 206 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 265
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 266 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 324
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 325 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 376
>gi|383848340|ref|XP_003699809.1| PREDICTED: RNA-binding protein lark-like [Megachile rotundata]
Length = 351
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ T++AD+K LF K+G + V +++ FV+ + E + A L G
Sbjct: 12 IFIGNLADKTSNADIKPLFEKYGKV--VECDVVKNYGFVHMENEEAGRNAIQNLNGQIVH 69
Query: 83 GNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G PIK E A+ P P+ ++VG ++ ++ E F K+G + + ++ N FV
Sbjct: 70 GQPIKCEAAKSRKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVR--NYGFV 127
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
D +A+K +NG+ + G+ ++V SR Q P D GRG +S
Sbjct: 128 HLEATGDVNDAIKELNGQMVDGQPMKVQI---STSRVRQRPGMGDPEQCYRCGRGGHWS 183
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ ++VGNL+ +T ++ELF K+G + V R++ FV+ + D A L G
Sbjct: 87 PTTKIFVGNLTDNTKAPQVRELFAKYGTV--VECDIVRNYGFVHLEATGDVNDAIKELNG 144
Query: 79 SDFRGNPIKIEFA 91
G P+K++ +
Sbjct: 145 QMVDGQPMKVQIS 157
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 138/311 (44%), Gaps = 42/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 313 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 371
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 372 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 431
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 432 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFA-NNPSQKTNQAILS 490
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + F S S G N G P ++V Y +
Sbjct: 491 QLYQSPNRR--YPGPLAQQAQRF--RFSPMTIDGMTSLAGINIPGHPGTGWCIFV-YNLA 545
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 546 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 605
Query: 286 PRITIMFSSSE 296
+ F +++
Sbjct: 606 RVLQXSFKTNK 616
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 82 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 141
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 142 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 201
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 202 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 261
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 262 KEERQAHLTNQYMQR 276
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 105/274 (38%), Gaps = 54/274 (19%)
Query: 36 DLKELFGKFGALDKVTTYS-------SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKI 88
D K L+ F A + + S+ + FV+F+ E A+ A + + G + +
Sbjct: 2 DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 61
Query: 89 -----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-- 135
E AK ++++ + + E L+E F KFG K + D +
Sbjct: 62 GRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKS 121
Query: 136 ---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGR 192
FV + R EDA +A+ +NG+++ G+Q+ V + + R+ + + I R
Sbjct: 122 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITR 181
Query: 193 GTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERI 252
G + V DG +D++ L FG I
Sbjct: 182 YQGVN------------LYVKNLDDG---------------IDDERLRKEFSPFGTITSA 214
Query: 253 KSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
K S+ + FV F S +EA +A + GR+
Sbjct: 215 KVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 248
>gi|28302297|gb|AAH46684.1| LOC398498 protein, partial [Xenopus laevis]
Length = 531
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
++VGN+ T++ ++ LF ++GA+ R +AFV+ + +A A + L G +
Sbjct: 70 IFVGNIDERTSEGEVTALFERYGAVLNCAVM--RQYAFVHMRGTREATKAVEELNGRELN 127
Query: 83 GNPIKIEFARPA-KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
G + +E ++P + + ++VG +S + E+ + F ++G + + +KD AFV +
Sbjct: 128 GKKMLVELSKPRPQNTWKIFVGNVSSSCEAAEIRKIFEEYGRVLECDIVKD--YAFVHMT 185
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDF 167
R +A A++ +NG+ I G+++ V+
Sbjct: 186 RESEARAAIEALNGKDIKGKRINVEM 211
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 18 PPSSNLW---VGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
P N W VGN+S+ A+++++F ++G + + + +AFV+ R +A+AA +
Sbjct: 138 PRPQNTWKIFVGNVSSSCEAAEIRKIFEEYGRVLECDIV--KDYAFVHMTRESEARAAIE 195
Query: 75 ALQGSDFRGNPIKIEFA 91
AL G D +G I +E +
Sbjct: 196 ALNGKDIKGKRINVEMS 212
>gi|119484580|ref|XP_001262069.1| nucleic acid-binding protein [Neosartorya fischeri NRRL 181]
gi|119410225|gb|EAW20172.1| nucleic acid-binding protein [Neosartorya fischeri NRRL 181]
Length = 307
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAK 73
P +++GNL D T DLK +FG ++KV + SR FA+V+F ++ AK+
Sbjct: 124 PKPTVYIGNLFYDVTAEDLKNHMQQFGVVEKVDLITDNRGMSRGFAYVHFDSIDSAKSCV 183
Query: 74 DALQGSDFRGNPIKIEFA------RPAKP-SKHLWVGGISQTVSKEELEEGFLKFGNIED 126
+A+ + G I ++A RP +P S+ L++G +S ++ +L E F N+ D
Sbjct: 184 EAMHLQAYEGRRIIAQYASSGGGSRPVQPVSRTLYLGNLSFEMTDRDLNELFRDINNVID 243
Query: 127 FKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ D T A E+ +E A +A + ++G+ G ++RVD+
Sbjct: 244 VRVSVDRRTGQPRGFAHAEFLDVESAQKAFEILSGKAPFGRRIRVDY 290
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKA 71
P S L++GNLS + TD DL ELF + V T R FA F VE A+
Sbjct: 212 PVSRTLYLGNLSFEMTDRDLNELFRDINNVIDVRVSVDRRTGQPRGFAHAEFLDVESAQK 271
Query: 72 AKDALQGSDFRGNPIKIEFA 91
A + L G G I+++++
Sbjct: 272 AFEILSGKAPFGRRIRVDYS 291
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 125/274 (45%), Gaps = 25/274 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQG 78
L+VGNL + ++ L LF G + + +AF+ + + A A A+
Sbjct: 8 TLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Query: 79 SDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
F IK+ +A P K H++VG +S + E L E F FG I + + +
Sbjct: 68 RLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQWPNSHD 183
+D +T AFV + + +A A++ +N + I +R ++ R P RE P+
Sbjct: 128 RDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLPPPRE--PSKGG 185
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNA 242
+ G + G S + + + + N+ P + ++ G +PP+V D+ ++H
Sbjct: 186 GQGGGMGGGPGNGSGVKGSQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISDD-LMHKH 241
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
+ FG I+ ++ + + +SF++F + + A A E
Sbjct: 242 FVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 18 PPS---SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVED 68
PPS ++L+VG+LS D T+A L E+F G + + T S +A+V + + D
Sbjct: 10 PPSFSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLAD 69
Query: 69 AKAAKDALQGSDFRGNPIKIEFARP-----AKPSKHLWVGGISQTVSKEELEEGFLKFGN 123
A+ A D L ++ +G P ++ ++ + +++V + +T+ + L + F FGN
Sbjct: 70 AERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGN 129
Query: 124 IEDFK-----FLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I K F K N FV Y E A EA++ +NG Q+G + + V + R
Sbjct: 130 ILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSER---- 185
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQMDEQ 237
T F++ L+V +P +V E
Sbjct: 186 -----------ATNDTKFTN-------------------------LYVKNFPDTVT--EA 207
Query: 238 MLHNAMILFGEIER--IKS-YPSRNYSFVEFRSVDEARRAKEGLQGR 281
L +GEI +KS +R + F+ + D AR A E L G+
Sbjct: 208 HLKQLFSPYGEITSMIVKSDNKNRKFCFINYSDADSARNAMENLNGK 254
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
+ N++V NL + L + F FG + KV T S+++ FV+++ E AK A +
Sbjct: 103 TGNIFVKNLDKTIDNKALFDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIE 162
Query: 75 ALQGSDFRGNPI-------KIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ G + K E A +L+V TV++ L++ F +G I
Sbjct: 163 KVNGMQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITSM 222
Query: 128 KFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
D F+ YS + A A++N+NG++I E ++D+
Sbjct: 223 IVKSDNKNRKFCFINYSDADSARNAMENLNGKKI-TEDGKIDY 264
>gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 144/355 (40%), Gaps = 66/355 (18%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 30 CPSPMQTGPTNDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 84
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 85 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 144
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 145 KELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRVEAEEAIKGLNGQKPSGAAEPI 204
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTG---------- 195
V F L P+RR P H A R ++ G
Sbjct: 205 TVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMASPLF 264
Query: 196 ------FSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFG 247
S S S VG N G ++V Y S DE +L FG
Sbjct: 265 SLLYLHLSTRFSPITIDSMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFG 323
Query: 248 EIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ +K + + + FV + DEA A L G D + + F +++
Sbjct: 324 AVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 378
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 142/327 (43%), Gaps = 49/327 (14%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKD 302
++ +S S+ + FV F ++A++A + + G+ N +I + + ++ +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Query: 303 YPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+ K R + G + LD
Sbjct: 276 LKRKFEQMKQDRITRYQGVNLYVKNLD 302
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKRVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKELFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|50415109|gb|AAH77356.1| LOC398498 protein [Xenopus laevis]
Length = 471
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
++VGN+ T++ ++ LF ++GA+ R +AFV+ + +A A + L G +
Sbjct: 10 IFVGNIDERTSEGEVTALFERYGAVLNCAVM--RQYAFVHMRGTREATKAVEELNGRELN 67
Query: 83 GNPIKIEFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
G + +E ++P +P ++VG +S + E+ + F ++G + + +KD AFV
Sbjct: 68 GKKMLVELSKP-RPQNTWKIFVGNVSSSCEAAEIRKIFEEYGRVLECDIVKD--YAFVHM 124
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
+R +A A++ +NG+ I G+++ V+
Sbjct: 125 TRESEARAAIEALNGKDIKGKRINVEM 151
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 18 PPSSNLW---VGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
P N W VGN+S+ A+++++F ++G + + + +AFV+ R +A+AA +
Sbjct: 78 PRPQNTWKIFVGNVSSSCEAAEIRKIFEEYGRVLECDIV--KDYAFVHMTRESEARAAIE 135
Query: 75 ALQGSDFRGNPIKIEFA 91
AL G D +G I +E +
Sbjct: 136 ALNGKDIKGKRINVEMS 152
>gi|344282867|ref|XP_003413194.1| PREDICTED: LOW QUALITY PROTEIN: msx2-interacting protein-like
[Loxodonta africana]
Length = 3747
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 511 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 570
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 571 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVIKVVFDRLKGMA 629
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+I G +++VDF
Sbjct: 630 LVLYNEIEYAQAAVKETKGRKISGNKIKVDF 660
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 392 PTSQLLSCLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGASEER 451
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 452 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 510
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 511 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 570
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP+I
Sbjct: 571 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVI 618
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 589 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVIKVVFDRLKGMALVLYNEIEYAQAAVKETKG 648
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 649 RKISGNKIKVDFA 661
>gi|237833563|ref|XP_002366079.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|211963743|gb|EEA98938.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|221486284|gb|EEE24545.1| RNA binding protein, putative [Toxoplasma gondii GT1]
gi|221508072|gb|EEE33659.1| RNA binding protein, putative [Toxoplasma gondii VEG]
Length = 382
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
S L+ G L D T+ L+++ + G L KV Y + AFV F + A+AA+DAL+GS
Sbjct: 65 SRTLFFGRLPEDVTEDSLRDVVLQHGDLKKVAVYPEKRMAFVEFYDLRHAEAARDALRGS 124
Query: 80 DFRGNPIKIEFARPAKPSKH-----LWV---------GGISQTVSKEELEEGFLKFGNIE 125
D G ++++F+ +P K L+V G + S + E F K G+++
Sbjct: 125 DVLGKRVEVQFSAVKRPDKDGNTGTLYVRPVSTVHVSGNWTDPNSLDAYRELFSKHGDLK 184
Query: 126 DFKFLKDGNT-AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ T FVEY L DA +AL+++NG G L + F
Sbjct: 185 KVSANRKRETEKFVEYFDLRDAQKALESLNGYVFNGATLHICF 227
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 217 DGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
D S+ L+ G P + E L + ++ G+++++ YP + +FVEF + A A++
Sbjct: 61 DALQSRTLFFGRLPE-DVTEDSLRDVVLQHGDLKKVAVYPEKRMAFVEFYDLRHAEAARD 119
Query: 277 GLQGRLFNDPRITIMFSSSELAPGKD 302
L+G R+ + FS+ + P KD
Sbjct: 120 ALRGSDVLGKRVEVQFSAVKR-PDKD 144
>gi|195470186|ref|XP_002087389.1| GE16637 [Drosophila yakuba]
gi|194173490|gb|EDW87101.1| GE16637 [Drosophila yakuba]
Length = 4999
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 664 LFIGNLEKDITAGELRGHFEGFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 723
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + + A V Y
Sbjct: 724 LGSNRIKLGFGK-SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRSRQLALVLY 782
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + G +L+VDF
Sbjct: 783 DQVQNAQAAVKDMRGTILRGRKLQVDF 809
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 118/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 562 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 621
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 622 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRGH 681
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 682 FEGFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 738
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 739 ---------------------------------------------TNCVWIDGV--GEKV 751
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ SR + V + V A+ A + ++G + ++ + F+S
Sbjct: 752 SESFLQSQFTRFGTVTKVSIDRSRQLALVLYDQVQNAQAAVKDMRGTILRGRKLQVDFAS 811
Query: 295 SEL 297
E
Sbjct: 812 REC 814
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FG + KV+ SR A V + +V++A+AA ++G
Sbjct: 738 PTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRSRQLALVLYDQVQNAQAAVKDMRG 797
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 798 TILRGRKLQVDFA 810
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 57/292 (19%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFV 61
L+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 10 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 69
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEEL 114
F DA AA A+ G G +K+ +A K H++VG +S ++ E++
Sbjct: 70 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI 129
Query: 115 EEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 130 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Query: 169 RSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGY 228
+P + S ++ K+ + V N+ P + ++ G
Sbjct: 190 TRKPPAPK--------------------STQENSTKQLRFEDVV--NQSSPKNCTVYCGG 227
Query: 229 PPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 228 IAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 278
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 114 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 173
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 174 MGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 233
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 234 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 293
Query: 171 QP 172
P
Sbjct: 294 SP 295
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 214 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 273
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 274 VSVNGTTIEGHVVKCYWGK 292
>gi|81914424|sp|Q8CH84.1|ELAV2_RAT RecName: Full=ELAV-like protein 2; AltName: Full=Hu-antigen B;
Short=HuB
gi|27374986|dbj|BAC53775.1| RNA binding protein HuB [Rattus norvegicus]
Length = 359
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 145/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G P
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGT 274
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 275 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 333
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 334 IASLNGYRLGDRVLQVSFKTNK 355
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 32/194 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKA 71
+P +N++V NLS TTD DLK +FGK+G++ S+ F FV F+ + A A
Sbjct: 188 SPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAA 247
Query: 72 AKDALQGSDFRGNPI------------------KIEFARPAKPSK----HLWVGGISQTV 109
A + L G+ F + + K E R K K +L++ + +V
Sbjct: 248 AVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSV 307
Query: 110 SKEELEEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
+ E+L+E F +FG I K + D + FV + E+A AL +NG+ IG + L
Sbjct: 308 NDEKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLY 367
Query: 165 VDFLRSQPSRREQW 178
V + + R+ +
Sbjct: 368 VAVAQRKEERKARL 381
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 64/292 (21%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY------SSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + L +LF + + + +S +A+V F +DA A
Sbjct: 12 NASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNAL 71
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + G PI+I F+ PS ++++ + ++ + L + F FG +
Sbjct: 72 EHLNFTPLNGKPIRIMFSH-RDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSC 130
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D N FV++ + E A A+K +NG I +Q+ V F+R
Sbjct: 131 KIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVR------------ 178
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
H R+ RG G + Y ++ +++ + L N
Sbjct: 179 HQERN-----RGNGSPKFTNVYVKNLSETTTDDD-----------------------LKN 210
Query: 242 AMILFGEIE-----RIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
+G I R S S+ + FV F+S D A A E L G FND ++
Sbjct: 211 IFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKV 262
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDAR 185
R+ N + R
Sbjct: 372 EERQAHLTNQYMQR 385
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F + G V T S S+A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + + F + + + G + D K L+ + P++ +
Sbjct: 179 --REAELGAKAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++AR+A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYV 263
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 107/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G+ + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|322797564|gb|EFZ19608.1| hypothetical protein SINV_13630 [Solenopsis invicta]
Length = 324
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ T++AD+K LF K+G + V +++ FV+ + E + A L G
Sbjct: 12 IFIGNLADKTSNADIKPLFEKYGKV--VECDVVKNYGFVHMENEEAGRNAIQNLNGHMVH 69
Query: 83 GNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G PIK E A+ P P+ ++VG ++ ++ E F K+G + + ++ N FV
Sbjct: 70 GQPIKCEAAKSRKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVR--NYGFV 127
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
D +A+K +NG+ + G+ ++V SR Q P D GRG +S
Sbjct: 128 HLEATGDVNDAIKELNGQIVDGQPMKVQI---STSRVRQRPGMGDPEQCYRCGRGGHWS 183
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ ++VGNL+ +T ++ELF K+G + V R++ FV+ + D A L G
Sbjct: 87 PTTKIFVGNLTDNTKAPQVRELFAKYGTV--VECDIVRNYGFVHLEATGDVNDAIKELNG 144
Query: 79 SDFRGNPIKIEFA 91
G P+K++ +
Sbjct: 145 QIVDGQPMKVQIS 157
>gi|334328479|ref|XP_001366092.2| PREDICTED: msx2-interacting protein isoform 1 [Monodelphis
domestica]
Length = 3559
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 438 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDITSVCKAIKKM 497
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S ++ + L F ++G + + + A
Sbjct: 498 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSTNITDQYLTRHFCRYGPVVKVVYDRLKGMA 556
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 557 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 587
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 43/219 (19%)
Query: 14 DKEAPPSS-NLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRV 66
+KE P S + V NL +TD LK+ LF +F KVT+ S + V+F++
Sbjct: 328 EKEEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKYGKVTSVQIHGASEERYGLVFFRQQ 387
Query: 67 EDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGI 105
ED + A++A +G F G I++ EF RP K ++ L++G +
Sbjct: 388 EDQEKAQNASKGKLFFGVQIEVTAWVGPETESENEF-RPLDERIDEFHPKATRTLFIGNL 446
Query: 106 SQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQ 162
+T + +L F +FG I D K AF++Y + +A+K ++G +G +
Sbjct: 447 EKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDITSVCKAIKKMDGEYLGNNR 506
Query: 163 LRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
L++ F +S P+ +Q+ H R GP++
Sbjct: 507 LKLGFGKSMPTNCVWLDGLSTNITDQYLTRHFCRYGPVV 545
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS + TD L F ++G + KV + A V + +E A+AA +G
Sbjct: 516 PTNCVWLDGLSTNITDQYLTRHFCRYGPVVKVVYDRLKGMALVLYNEIEYAQAAVKETKG 575
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 576 RKIGGNKIKVDFA 588
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 127 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 186
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 187 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 246
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 247 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 306
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 307 KEERQAHLTNQYMQR 321
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 36 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 95
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 96 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 155
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 156 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 215
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 216 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 248
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 249 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 293
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 206 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 265
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 266 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 325
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 326 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 385
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 386 KEERQAHLTNQYMQR 400
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 115 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 174
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 175 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 234
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 235 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 294
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 295 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 327
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 328 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 372
>gi|296805985|ref|XP_002843812.1| nucleic acid-binding protein [Arthroderma otae CBS 113480]
gi|238845114|gb|EEQ34776.1| nucleic acid-binding protein [Arthroderma otae CBS 113480]
Length = 318
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 23/178 (12%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAK 73
P S ++VGN+ D T ADLKE K+G + ++ S SR F +V F+ +E+AK A
Sbjct: 88 PKSTVYVGNILFDITAADLKEYASKYGKVVGSRIIYDSRGLSRGFGYVKFENIEEAKKAV 147
Query: 74 DALQGSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLKFGN 123
+ + S+F G + + +A R +P++ ++VG I+ ++ +L E F N
Sbjct: 148 NDMHLSEFEGRKLSVNYAQMDLKEETPQRTIEPTRTVFVGNIAHQITDRDLHELFDSIPN 207
Query: 124 IEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
+ D + D T A E++ +E A + + G+ G LR+D+ S +RR
Sbjct: 208 VFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEALKGKAPYGRPLRLDY--SHSTRR 263
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TTD +L FG++G + SR F FV F+ +DA A +
Sbjct: 214 NNVYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFENPDDAAKAVEG 273
Query: 76 LQGSDF---------------RGNPIKIEFARPAK------PSKHLWVGGISQTVSKEEL 114
L G F R +K F + K P +L++ + T+S E+L
Sbjct: 274 LNGKKFDDKEWYVGKAQKKSEREQELKGRFEQSIKEAADKYPGLNLYLKNLDDTISDEKL 333
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +G I K ++D + FV +S E+A AL +NG+ G+ L V +
Sbjct: 334 KEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMNGKMFAGKPLYVALAQ 393
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 394 RKEERRARL 402
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 126/311 (40%), Gaps = 71/311 (22%)
Query: 2 APPPSK-FNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYS 54
APPP+ A ++ +++L+VG+L + D+ L +LF + G + V TT
Sbjct: 15 APPPNGGVANAPNNANQFVTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRR 74
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQT 108
S + +V F +DA A D L + I+I ++ PS ++++ + +
Sbjct: 75 SLGYGYVNFSNPQDAARALDVLNFTPLNNRSIRIMYSH-RDPSLRKSGTANIFIKNLDKA 133
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQL 163
+ + L + F FG I K D + FV++ E A A+ +NG I +Q+
Sbjct: 134 IDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDNEEAAQNAIDKLNGMLINDKQV 193
Query: 164 RV-DFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK 222
V FLR Q D +A ++ +
Sbjct: 194 YVGHFLRKQ--------------------------DRENALSKTKFNN------------ 215
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY--------PSRNYSFVEFRSVDEARRA 274
++V DE++ MI FGE I S SR + FV F + D+A +A
Sbjct: 216 -VYVKNLSESTTDEEL----MINFGEYGTITSALIMRDADGKSRCFGFVNFENPDDAAKA 270
Query: 275 KEGLQGRLFND 285
EGL G+ F+D
Sbjct: 271 VEGLNGKKFDD 281
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 114/288 (39%), Gaps = 51/288 (17%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKD 74
++N+++ NL L + F FG + K+ T +S + + FV F E A+ A D
Sbjct: 122 TANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDNEEAAQNAID 181
Query: 75 ALQGSDFRGNPIKI---------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + E A +++V +S++ + EEL F ++G I
Sbjct: 182 KLNGMLINDKQVYVGHFLRKQDRENALSKTKFNNVYVKNLSESTTDEELMINFGEYGTIT 241
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++D + FV + +DAA+A++ +NG++ ++ V + + R ++
Sbjct: 242 SALIMRDADGKSRCFGFVNFENPDDAAKAVEGLNGKKFDDKEWYVGKAQKKSEREQEL-- 299
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
+ + S+ D P L++ DE+ L
Sbjct: 300 ------------------------KGRFEQSIKEAADKYPGLNLYLKNLDDTISDEK-LK 334
Query: 241 NAMILFGEIERIK-----SYPSRNYSFVEFRSVDEARRAKEGLQGRLF 283
+G I K + SR FV F + +EA RA + G++F
Sbjct: 335 EMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMNGKMF 382
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAK 73
P NL++ NL +D LKE+F +G + T SR FV F E+A A
Sbjct: 315 PGLNLYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRAL 374
Query: 74 DALQGSDFRGNPIKIEFAR 92
+ G F G P+ + A+
Sbjct: 375 GEMNGKMFAGKPLYVALAQ 393
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 138/311 (44%), Gaps = 41/311 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 98 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQ--IGGEQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ E + V F + PS++
Sbjct: 158 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPSATEPITVKF-ANNPSQKTNQAILS 216
Query: 177 ---QWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPS 231
Q PN GP+ + FS S S G N G ++V Y +
Sbjct: 217 QLYQSPNRR--YPGPLAQQAQRFS-RFSPMTIDGMTSLAGINIPGHAGTGWCIFV-YNLA 272
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 273 PDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGD 332
Query: 286 PRITIMFSSSE 296
+ + F +++
Sbjct: 333 RVLQVSFKTNK 343
>gi|18406092|ref|NP_565990.1| MEI2-like 2 protein [Arabidopsis thaliana]
gi|75337307|sp|Q9SJG8.2|AML2_ARATH RecName: Full=Protein MEI2-like 2; Short=AML2; AltName:
Full=MEI2-like protein 2
gi|13605835|gb|AAK32903.1|AF367316_1 At2g42890/F7D19.11 [Arabidopsis thaliana]
gi|20197963|gb|AAD21720.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|23506039|gb|AAN28879.1| At2g42890/F7D19.11 [Arabidopsis thaliana]
gi|330255088|gb|AEC10182.1| MEI2-like 2 protein [Arabidopsis thaliana]
Length = 843
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV-TTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PS L+V N+++ D++L LF FG + + T SR F + + + A AA ALQ
Sbjct: 196 PSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQ 255
Query: 78 GSDFRGNPIKIEFARPAK-PSKH------LWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ R + I F+ P + PS+ L + + TVS +EL + F +G I + +
Sbjct: 256 NTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTVSNDELLQLFGAYGEIREIRET 315
Query: 131 KDGN-TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
+ F+EY + DA ALK +N +IGG+ ++++ R +RR P
Sbjct: 316 PNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELSRPGGARRLSVP 365
>gi|326472099|gb|EGD96108.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 293
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFG-ALDKVTTYSSRS----FAFVYFKRVEDAK 70
E P + ++VGN+ D T ADLKE K+G L Y SR F +V F+ VE+AK
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYDSRGLSRGFGYVRFESVEEAK 136
Query: 71 AAKDALQGSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLK 120
A D + S++ G + + FA R +P++ ++VG I+ V+ +L F
Sbjct: 137 KAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRKMEPTRTIFVGNIAHQVTDRDLHALFDD 196
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
N+ D + D T A E++ +E A + + G+ G LR+D+ S +R
Sbjct: 197 IPNVFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDY--SHSAR 254
Query: 175 R 175
R
Sbjct: 255 R 255
Score = 40.4 bits (93), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKF-------GALDKVTTYSSRSFAFVYFKRVE 67
++ P+ ++VGN++ TD DL LF A+D+ T R FA F VE
Sbjct: 168 RKMEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMP-RGFAHAEFTDVE 226
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAK 95
A A + L+G G P++++++ A+
Sbjct: 227 SAIAGFEMLKGQAPYGRPLRLDYSHSAR 254
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 118/287 (41%), Gaps = 38/287 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL A ++ L LF + GA+ + +AFV F + A A A+
Sbjct: 10 LYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAATALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F +K+ +A P K H++VG +S + + L+E F FG I + + ++
Sbjct: 70 SFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + +A A+ +NG+ +G +R ++ +P H
Sbjct: 130 DPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNN 189
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
P Y+ + QSS P + ++ G + DE ++
Sbjct: 190 SKP-------------NYEEVYNQSS-------PTNCTVYCGGFTNGITDE-LIKKTFSP 228
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
FG I+ I+ + + Y+F++F + + A A E N + +
Sbjct: 229 FGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFW 275
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 33/177 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + LKE F FG + T S+ +AFV F + +A+AA +A
Sbjct: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINA 156
Query: 76 LQGSDFRGNPIKIEFARP---------------AKPSKH------------LWVGGISQT 108
+ G I+ ++ +KP+ ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNG 216
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ E +++ F FG I+D + KD AF++++ E A A+++ + +I G ++
Sbjct: 217 ITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKC 273
>gi|395522187|ref|XP_003765121.1| PREDICTED: uncharacterized protein LOC100928630 [Sarcophilus
harrisii]
Length = 3539
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + D +AF+ + + A +
Sbjct: 428 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDITSVCKAIKKM 487
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S ++ + L F ++G + + + A
Sbjct: 488 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSTNITDQYLTRHFCRYGPVVKVVYDRLKGMA 546
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 547 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 577
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 43/219 (19%)
Query: 14 DKEAPPSS-NLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRV 66
+KE P S + V NL +TD LK+ LF +F KVT+ S + V+F++
Sbjct: 318 EKEEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKYGKVTSVQIHGASEERYGLVFFRQQ 377
Query: 67 EDAKAAKDALQGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGI 105
ED + A++A +G F G I++ EF RP K ++ L++G +
Sbjct: 378 EDQEKAQNASKGKLFFGVQIEVTAWVGPETESENEF-RPLDERIDEFHPKATRTLFIGNL 436
Query: 106 SQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQ 162
+T + +L F +FG I D K AF++Y + +A+K ++G +G +
Sbjct: 437 EKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDITSVCKAIKKMDGEYLGNNR 496
Query: 163 LRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
L++ F +S P+ +Q+ H R GP++
Sbjct: 497 LKLGFGKSMPTNCVWLDGLSTNITDQYLTRHFCRYGPVV 535
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS + TD L F ++G + KV + A V + +E A+AA +G
Sbjct: 506 PTNCVWLDGLSTNITDQYLTRHFCRYGPVVKVVYDRLKGMALVLYNEIEYAQAAVKETKG 565
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 566 RKIGGNKIKVDFA 578
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 61/293 (20%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFVY 62
+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELE 115
F DA AA A+ G G +K+ +A K H++VG +S ++ E+++
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 116 EGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 170 SQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
+P + Q N+ R ++ N+ P + ++ G
Sbjct: 181 RKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYCG 216
Query: 228 YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 217 GIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 268
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 104 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 163
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 164 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 223
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 224 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 283
Query: 171 QP 172
P
Sbjct: 284 SP 285
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 204 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 263
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 264 VSVNGTTIEGHVVKCYWGK 282
>gi|326477036|gb|EGE01046.1| RNA recognition motif-containing protein [Trichophyton equinum CBS
127.97]
Length = 300
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 23/178 (12%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG-ALDKVTTYSSRS----FAFVYFKRVEDAKAAK 73
P + ++VGN+ D T ADLKE K+G L Y SR F +V F+ VE+AK A
Sbjct: 87 PKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYDSRGLSRGFGYVRFESVEEAKKAI 146
Query: 74 DALQGSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLKFGN 123
D + S++ G + + FA R +P++ ++VG I+ V+ +L F N
Sbjct: 147 DEMHLSEYEGRKLSVNFAQVDLRDEQPQRKMEPTRTIFVGNIAHQVTDRDLHALFDDIPN 206
Query: 124 IEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
+ D + D T A E++ +E A + + G+ G LR+D+ S +RR
Sbjct: 207 VFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDY--SHSARR 262
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKF-------GALDKVTTYSSRSFAFVYFKRVE 67
++ P+ ++VGN++ TD DL LF A+D+ T R FA F VE
Sbjct: 175 RKMEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMP-RGFAHAEFTDVE 233
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAK 95
A A + L+G G P++++++ A+
Sbjct: 234 SAIAGFEMLKGQAPYGRPLRLDYSHSAR 261
>gi|42571201|ref|NP_973674.1| MEI2-like 2 protein [Arabidopsis thaliana]
gi|145331103|ref|NP_001078043.1| MEI2-like 2 protein [Arabidopsis thaliana]
gi|330255089|gb|AEC10183.1| MEI2-like 2 protein [Arabidopsis thaliana]
gi|330255090|gb|AEC10184.1| MEI2-like 2 protein [Arabidopsis thaliana]
Length = 830
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV-TTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PS L+V N+++ D++L LF FG + + T SR F + + + A AA ALQ
Sbjct: 183 PSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQ 242
Query: 78 GSDFRGNPIKIEFARPAK-PSKH------LWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ R + I F+ P + PS+ L + + TVS +EL + F +G I + +
Sbjct: 243 NTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTVSNDELLQLFGAYGEIREIRET 302
Query: 131 KDGN-TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
+ F+EY + DA ALK +N +IGG+ ++++ R +RR P
Sbjct: 303 PNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELSRPGGARRLSVP 352
>gi|358412972|ref|XP_887465.4| PREDICTED: ELAV-like protein 3 isoform 8 [Bos taurus]
Length = 511
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 182 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 236
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 237 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 296
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 297 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFA-N 355
Query: 171 QPSRR-------EQWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN--- 215
PS++ + + +S GP+ + F DN + AY KR P + G +
Sbjct: 356 NPSQKTGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLA 415
Query: 216 ---RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVE 264
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 416 GVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVT 475
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 476 MTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 507
>gi|297824253|ref|XP_002880009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325848|gb|EFH56268.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 827
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV-TTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PS L+V N+++ D++L LF FG + + T SR F + + + A AA ALQ
Sbjct: 181 PSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRALQ 240
Query: 78 GSDFRGNPIKIEFARPAK-PSKH------LWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ R + I F+ P + PS+ L + + TVS +EL + F +G I + +
Sbjct: 241 NTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTVSNDELLQLFGAYGEIREIRET 300
Query: 131 KDGN-TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWP 179
+ F+EY + DA ALK +N +IGG+ ++++ R +RR P
Sbjct: 301 PNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELSRPGGARRLSVP 350
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 145/322 (45%), Gaps = 51/322 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 77 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 135
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 136 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 195
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRRE------ 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 196 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKTNQAILS 254
Query: 177 ---QWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQ------SSVGRNRDGPPSK 222
Q PN GP+ + F DN + AY KR P S G N G
Sbjct: 255 QLYQSPNRR--YPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHAGT 312
Query: 223 --ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRA 274
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 313 GWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMA 371
Query: 275 KEGLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 372 IASLNGYRLGDRVLQVSFKTNK 393
>gi|326679167|ref|XP_003201252.1| PREDICTED: msx2-interacting protein [Danio rerio]
Length = 3426
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL +F +FG + D S +AF+ + + A +
Sbjct: 435 TRTLFIGNLEKTTTYNDLLNIFQRFGEIVDIDIKKVNGSPQYAFLQYCDIASVCKAIKKM 494
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S +++++ L F ++G++ F + A
Sbjct: 495 DGEYLGNNRLKLGFGK-SMPTTCVWLDGLSSSITEQYLTRHFCRYGHVVKVVFDRLKGMA 553
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ Y+ +E A A+K G +IGG +++VDF
Sbjct: 554 LILYNNIEYAQAAVKETKGWKIGGNKIKVDF 584
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAE 148
+ ++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +
Sbjct: 2 VRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKVLPKRGSEGGVAAFVDFVDIKSAQK 61
Query: 149 ALKNINGRQIGGEQLRVDF 167
A +IN ++G LR D+
Sbjct: 62 AHNSIN--KMGDRDLRTDY 78
>gi|302506947|ref|XP_003015430.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
gi|291179002|gb|EFE34790.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
Length = 293
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFG-ALDKVTTYSSRS----FAFVYFKRVEDAK 70
E P + ++VGN+ D T ADLKE K+G L Y SR F +V F+ VE+AK
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYDSRGLSRGFGYVRFESVEEAK 136
Query: 71 AAKDALQGSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLK 120
A D + S++ G + + FA R +P++ ++VG I+ V+ +L F
Sbjct: 137 KAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRKMEPTRTIFVGNIAHQVTDRDLHALFDD 196
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
N+ D + D T A E++ +E A + + G+ G LR+D+ S +R
Sbjct: 197 IPNVFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDY--SHSAR 254
Query: 175 R 175
R
Sbjct: 255 R 255
Score = 40.4 bits (93), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKF-------GALDKVTTYSSRSFAFVYFKRVE 67
++ P+ ++VGN++ TD DL LF A+D+ T R FA F VE
Sbjct: 168 RKMEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMP-RGFAHAEFTDVE 226
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAK 95
A A + L+G G P++++++ A+
Sbjct: 227 SAIAGFEMLKGQAPYGRPLRLDYSHSAR 254
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKE+FGK+G V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDD 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G D G I + E R + K +L+V + + E L
Sbjct: 251 MNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 137/327 (41%), Gaps = 49/327 (14%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A+ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K ++ Y P++ + N
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKEMFGKYGPALSVKVMTDDNG 228
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKD 302
S+ + FV F ++A++A + + G+ N I + + ++ +
Sbjct: 229 -------------KSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKKVERQTE 275
Query: 303 YPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+ K R + G + LD
Sbjct: 276 LKRKFEQMKQDRITRYQGVNLYVKNLD 302
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDAR 185
R+ N + R
Sbjct: 372 EDRQAHLTNEYMQR 385
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F + G V T S S+A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEHA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAEL---- 183
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
G + + Y + + G + D K L+ + P++ +
Sbjct: 184 ----------GAKVKEFPNVYIK-----NFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 106/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G+ + + E K ++++ + + E L++ F KFG
Sbjct: 160 GTLLNDRKVFVGRFKSRKEREAELGAKVKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------------- 263
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
GR + + KR Q R + + D++ L
Sbjct: 264 ---------GRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ TTD DLK FG++G + S+ F FV F+ +DA A ++
Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVES 274
Query: 76 LQGSDF---------------RGNPIKIEFARPAKP------SKHLWVGGISQTVSKEEL 114
L G F R +++ + + K S +L+V + ++S E+L
Sbjct: 275 LNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKL 334
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG + K ++D N + FV ++ E+A EA+ ++G+ I + L V +
Sbjct: 335 KEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQ 394
Query: 170 SQPSRR 175
+ RR
Sbjct: 395 RKEDRR 400
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 70/292 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TD+ L + FG+ G + V T S + +V F +DA A
Sbjct: 35 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 94
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
L G PI++ ++ PS ++++ + +++ + L + F FGNI
Sbjct: 95 QELNYIPLYGKPIRVMYSH-RDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSC 153
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D + FV+Y+ E A +A++ +NG + +Q+ V FLR Q R+ N
Sbjct: 154 KVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQ--ERDSTANK 211
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
T F++ Y ++ +S+ + L N
Sbjct: 212 ------------TKFTN---VYVKNLAESTTDDD-----------------------LKN 233
Query: 242 AMILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
A FGE +I S S+ + FV F + D+A RA E L G F+D
Sbjct: 234 A---FGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDD 282
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKD 74
+ N+++ NL L + F FG + KV SS + + FV + E A+ A +
Sbjct: 123 AGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIE 182
Query: 75 ALQGSDFRGNPIKI-------EFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + E A +K +++V ++++ + ++L+ F ++G I
Sbjct: 183 KLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKIT 242
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
+KDG FV + +DAA A++++NG + ++ V + + R +
Sbjct: 243 SAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETEL 300
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
SSNL+V NL +D LKE+F FG + +S+ FV F E+A A
Sbjct: 317 SSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMS 376
Query: 75 ALQGSDFRGNPIKIEFAR 92
L G P+ + A+
Sbjct: 377 QLSGKMIESKPLYVAIAQ 394
>gi|332031363|gb|EGI70876.1| RNA-binding protein lark [Acromyrmex echinatior]
Length = 355
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ T++AD+K LF K+G + V +++ FV+ + E + A L G
Sbjct: 12 IFIGNLADKTSNADIKPLFEKYGKV--VECDVVKNYGFVHMENEEAGRNAIQNLNGHMVH 69
Query: 83 GNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G PIK E A+ P P+ ++VG ++ ++ E F K+G + + ++ N FV
Sbjct: 70 GQPIKCEAAKSRKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVR--NYGFV 127
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
D +A+K +NG+ + G+ ++V SR Q P D GRG +S
Sbjct: 128 HLEATGDVNDAIKELNGQIVDGQPMKVQI---STSRVRQRPGMGDPEQCYRCGRGGHWS 183
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ ++VGNL+ +T ++ELF K+G + V R++ FV+ + D A L G
Sbjct: 87 PTTKIFVGNLTDNTKAPQVRELFAKYGTV--VECDIVRNYGFVHLEATGDVNDAIKELNG 144
Query: 79 SDFRGNPIKIEFA 91
G P+K++ +
Sbjct: 145 QIVDGQPMKVQIS 157
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 63/352 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHS---- 201
V F L P+RR P H A R ++ G S
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVP 270
Query: 202 ---AYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIE 250
R P S VG N G ++V Y S DE +L FG +
Sbjct: 271 PSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGAVN 329
Query: 251 RIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+K + + + FV + DEA A L G D + + F +++
Sbjct: 330 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 381
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 65/287 (22%)
Query: 18 PPS---SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVED 68
PPS ++L+VG+LS D T+A L E+F G + + T S +A+V + + D
Sbjct: 10 PPSFSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLAD 69
Query: 69 AKAAKDALQGSDFRGNPIKIEFARP-----AKPSKHLWVGGISQTVSKEELEEGFLKFGN 123
A+ A D L ++ +G P ++ ++ + +++V + +T+ + L + F FGN
Sbjct: 70 AERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGN 129
Query: 124 IEDFK-----FLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I K F K N FV Y E A EA++ +NG Q+G + + V + R
Sbjct: 130 ILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSER---- 185
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQMDEQ 237
T F++ L+V +P +V E
Sbjct: 186 -----------ATNDTKFTN-------------------------LYVKNFPDTVT--EA 207
Query: 238 MLHNAMILFGEIER--IKS-YPSRNYSFVEFRSVDEARRAKEGLQGR 281
L +GEI +KS +R + F+ + D AR A E L G+
Sbjct: 208 HLKELFSPYGEITSMIVKSDNKNRKFCFINYSDADSARNAMENLNGK 254
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
+ N++V NL + L + F FG + KV T S+++ FV+++ E AK A +
Sbjct: 103 TGNIFVKNLDKTIDNKALFDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIE 162
Query: 75 ALQGSDFRGNPI-------KIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ G + K E A +L+V TV++ L+E F +G I
Sbjct: 163 KVNGMQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDTVTEAHLKELFSPYGEITSM 222
Query: 128 KFLKDGNT---AFVEYSRLEDAAEALKNINGRQI 158
D F+ YS + A A++N+NG++I
Sbjct: 223 IVKSDNKNRKFCFINYSDADSARNAMENLNGKKI 256
>gi|302659529|ref|XP_003021453.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
gi|291185354|gb|EFE40835.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
Length = 293
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFG-ALDKVTTYSSRS----FAFVYFKRVEDAK 70
E P + ++VGN+ D T ADLKE K+G L Y SR F +V F+ VE+AK
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYDSRGLSRGFGYVRFESVEEAK 136
Query: 71 AAKDALQGSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLK 120
A D + S++ G + + FA R +P++ ++VG I+ V+ +L F
Sbjct: 137 KAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRKMEPTRTIFVGNIAHQVTDRDLHALFDD 196
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
N+ D + D T A E++ +E A + + G+ G LR+D+ S +R
Sbjct: 197 IPNVFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDY--SHSAR 254
Query: 175 R 175
R
Sbjct: 255 R 255
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKF-------GALDKVTTYSSRSFAFVYFKRVE 67
++ P+ ++VGN++ TD DL LF A+D+ T R FA F VE
Sbjct: 168 RKMEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMP-RGFAHAEFTDVE 226
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAK 95
A A + L+G G P++++++ A+
Sbjct: 227 SAIAGFEMLKGQAPYGRPLRLDYSHSAR 254
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 34/201 (16%)
Query: 8 FNRAYDDKEA---PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFA 59
F R + EA P +N++V NLS T+D DLK++F +GA+ SR F
Sbjct: 196 FVRRLERIEANGSPKFTNVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFG 255
Query: 60 FVYFKRVEDAKAAKDALQGSDF---------------RGNPIKIEF--ARPAKPSK---- 98
FV F+ + A AA + L G F R +K +F R ++ K
Sbjct: 256 FVNFQSPDSAAAAVEKLNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEKMKAA 315
Query: 99 HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNI 153
+L++ + T+ +E L+E F +FG+I K + D + FV +S E+A+ AL +
Sbjct: 316 NLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEM 375
Query: 154 NGRQIGGEQLRVDFLRSQPSR 174
NG+ IG + L V + + R
Sbjct: 376 NGKMIGKKPLYVAIAQRREER 396
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 107/283 (37%), Gaps = 50/283 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTT------YSSRSFAFVYFKRVEDAKAA 72
P+ +L+VG+L + + L +LF + + +S +A+V F +DA A
Sbjct: 31 PNRSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKA 90
Query: 73 KDALQGSDFRGNPIKIEFAR---PAKPSKH--LWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + G PI+I F+ + S H +++ + + + L E F FG +
Sbjct: 91 MEVLNFTPLNGKPIRIMFSHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLSC 150
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K D N F+++ EDA A+ +NG + ++ V
Sbjct: 151 KVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYV----------------- 193
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
GP + R N S + ++ K ++ Y
Sbjct: 194 ----GPFVRRLERIEANGSPKFTNVYVKNLSETTSDEDLKKIFSSY-------------G 236
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
I + + ++ SR + FV F+S D A A E L G F+D
Sbjct: 237 AITSAIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKLNGMTFSD 279
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDAR 185
R+ N + R
Sbjct: 372 EERQAHLTNEYMQR 385
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F + G V T S+A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRRSGVGNIFVKNLDKSINNKVLYDTASAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 106/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKVLYDTASAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 50/273 (18%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL ++ + LF + G++ K ++ +AFV F D A ALQ
Sbjct: 44 LYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGANDPYAFVEFS---DHAQASQALQTM 100
Query: 80 DFR---GNPIKIEFARP--AKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ R +K+ +A +PSK H++VG +S V ++L E F FG++ D
Sbjct: 101 NKRLLLDREMKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 160
Query: 128 KFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K ++D NT FV Y + E+A A++ +NG+ +G +R ++ +P +E+ +
Sbjct: 161 KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPVHY 220
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
++ I + +G DN S Y VG + E+ +
Sbjct: 221 NEKSYDEIYNQTSG--DNTSVY--------VGN----------------IANLSEEDIRQ 254
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
A +G I ++ + + Y+FV+F + D A +A
Sbjct: 255 AFASYGRISEVRIFKMQGYAFVKFDNKDAAAKA 287
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 30/180 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
++VG+LS++ + L+E F FG + T S+ + FV + + E+A+ A + +
Sbjct: 133 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 192
Query: 77 QGSDFRGNPIKIEFA--RPAKPSK---------------------HLWVGGISQTVSKEE 113
G I+ +A +P K ++VG I+ +S+E+
Sbjct: 193 NGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYDEIYNQTSGDNTSVYVGNIA-NLSEED 251
Query: 114 LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
+ + F +G I + + K AFV++ + AA+A+ +N +++GG+ +R + ++ S
Sbjct: 252 IRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKTGDS 311
>gi|308483894|ref|XP_003104148.1| CRE-RSP-8 protein [Caenorhabditis remanei]
gi|308258456|gb|EFP02409.1| CRE-RSP-8 protein [Caenorhabditis remanei]
Length = 297
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 6/86 (6%)
Query: 12 YDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKR 65
YD + PPS L V NLS+ TTD DL+++FG+FG +DK + +SR F F+YFK
Sbjct: 65 YDRENPPPSKCLGVFNLSSYTTDKDLRDVFGEFGEIDKCDLVYDRPSGNSRGFGFIYFKL 124
Query: 66 VEDAKAAKDALQGSDFRGNPIKIEFA 91
+EDA AA++ L +D G+ I+++++
Sbjct: 125 IEDATAAREKLCNTDLDGHKIRVDYS 150
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 160 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 219
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 220 NGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 279
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 280 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 339
Query: 172 PSRREQWPNSHDAR 185
R+ N + R
Sbjct: 340 EERQAHLTNEYMQR 353
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL------DKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F + G + V T S S+A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
D + +G P++I +++ PS L G+ V E +G+
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPS--LRRSGV---VCDENGSKGY-------------- 108
Query: 133 GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
FV + E A A++ +NG + ++ V +S+ R
Sbjct: 109 ---GFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKER 147
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 34/298 (11%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +++VGN+ TD L+E+F G ++ K+ SF F+ + A A
Sbjct: 70 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAI 129
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+L G G PIK+ +A + P + +++VG + V+ L F + D
Sbjct: 130 LSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDA 189
Query: 128 KFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ + D T FV + +DA A+ ++NG+ +G Q+R ++ + E
Sbjct: 190 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGE----- 244
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK----ILWVG-YPPSVQMDE 236
+ I+ S+ S + +P N DGP + ++VG P M++
Sbjct: 245 ----EKQILDTKVDLSNGSSESGKENP------NEDGPENNPQFTTVYVGNLPHEATMND 294
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
L + G IE ++ + + FV + + +EA A + G+L +I + S
Sbjct: 295 VHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKCSWGS 352
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 32/187 (17%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS T+ DLK FG +G + S+ F FV F+ EDA A +A
Sbjct: 211 NNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAEDAAKAVEA 270
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEE 113
L G R +K F + K S +L++ + +++ E+
Sbjct: 271 LNGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEK 330
Query: 114 LEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
L+E F +FG I +K ++D N + FV +S E+A+ AL +NG+ I + L V
Sbjct: 331 LKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAVA 390
Query: 169 RSQPSRR 175
+ + RR
Sbjct: 391 QRKEDRR 397
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + D+ L +LF + G + V T S + +V F +DA A
Sbjct: 31 TTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAL 90
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
D L + I++ ++ S+ ++++ + +T+ + L + F FG I K
Sbjct: 91 DVLNFTPMNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCK 150
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRV-DFLRSQ 171
DG+ FV++ + A A+ +NG I +Q+ V FLR Q
Sbjct: 151 IATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQ 199
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTY---SSRSFAFVYFKRVEDAKAAKD 74
++N+++ NL L + F FG + K+ T S+ + FV F+ + A+ A D
Sbjct: 119 TANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAID 178
Query: 75 ALQGSDFRGNPIKI-EFARPAKPSKHL--------WVGGISQTVSKEELEEGFLKFGNIE 125
L G + + F R L +V +S++ ++++L+ F +G I
Sbjct: 179 KLNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTIT 238
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
++D + FV + EDAA+A++ +NG+++ ++ V + + R ++
Sbjct: 239 SAVLMRDADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKKSEREQELKG 298
Query: 181 SHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
+ K S G N L++ DE++
Sbjct: 299 RFE-----------------QTVKESVVDKFQGLN--------LYLKNLDDSITDEKLKE 333
Query: 241 NAMILFGEIERIKSYP--------SRNYSFVEFRSVDEARRAKEGLQGRLF 283
+F E I SY SR FV F + +EA RA + G++
Sbjct: 334 ----MFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMNGKMI 380
>gi|195114438|ref|XP_002001774.1| GI17029 [Drosophila mojavensis]
gi|193912349|gb|EDW11216.1| GI17029 [Drosophila mojavensis]
Length = 5892
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T ++L+ F FG + ++ ++AF + + A + G
Sbjct: 689 LFIGNLEKDITASELRVHFESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 748
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + + A V Y
Sbjct: 749 LGSNRIKLGFGK-SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRMRQLALVLY 807
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K + G + G +L+VDF
Sbjct: 808 DQVQNAQAAVKEMRGTIMRGRKLQVDF 834
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 587 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 646
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 647 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITASELRVH 706
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 707 FESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMPT 764
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FG + KV+ R A V + +V++A+AA ++G
Sbjct: 763 PTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRMRQLALVLYDQVQNAQAAVKEMRG 822
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 823 TIMRGRKLQVDFA 835
>gi|348544591|ref|XP_003459764.1| PREDICTED: RNA-binding protein 4.1-like [Oreochromis niloticus]
Length = 419
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNLS DTT +L+ LF ++G + + + ++F FV+ +A+ A L +
Sbjct: 4 IFIGNLSPDTTSDELRSLFSQYGKIAECSI--VKNFGFVHMDDKTEAEEAIRNLHQYELN 61
Query: 83 GNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
G P+ +E +R ++ S L VG I+ T +EL F +FG + + +K N AFV
Sbjct: 62 GQPMNVELSRGKSRGSTKLHVGNIACT--NQELRAKFEEFGTVLECDIVK--NYAFVHME 117
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDF----LRSQP 172
R+EDA EA+ ++ G+ + V LR+ P
Sbjct: 118 RMEDAMEAINQLDNTAFKGKLMSVKLSTSRLRTAP 152
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 32/191 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKA 71
+P +N++V NLS TTD DLK +FGK+G++ S+ F FV F+ + A A
Sbjct: 214 SPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAA 273
Query: 72 AKDALQGSDFRGNPI------------------KIEFARPAKPSK----HLWVGGISQTV 109
A + L G+ F + + K E R K K +L++ + +V
Sbjct: 274 AVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGXNLYLKNLDDSV 333
Query: 110 SKEELEEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLR 164
+ E+L E F +FG I K + D + FV + E+A AL +NG+ IG + L
Sbjct: 334 NDEKLXELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLY 393
Query: 165 VDFLRSQPSRR 175
V + + R+
Sbjct: 394 VAVAQRKEERK 404
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 64/292 (21%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY------SSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + L +LF + + + +S +A+V F +DA A
Sbjct: 38 NASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNAL 97
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + G PI+I F+ PS ++++ + ++ + L + F FG +
Sbjct: 98 EHLNFTPLNGKPIRIMFSH-RDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSC 156
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D N FV++ + E A A+K +NG I +Q+ V F+R
Sbjct: 157 KIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVR------------ 204
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
H R+ G G + Y ++ +++ + L N
Sbjct: 205 HQERN-----XGNGSPKFTNVYVKNLSETTTDDD-----------------------LKN 236
Query: 242 AMILFGEIE-----RIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
+G I R S S+ + FV F+S D A A E L G FND ++
Sbjct: 237 IFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKV 288
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 30/194 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L+
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQ 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDAR 185
R+ N + R
Sbjct: 372 EERQAYLTNEYMQR 385
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F G + + T S ++A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 69 LDTMNFDVIKGKPLRIMWSQ-RDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
+ D N + FV + E A A++ +NG + G ++ F+ SR+E
Sbjct: 128 CNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKV---FVGQFKSRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV---------------- 263
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
GR + + KR+ Q R + + D++ L
Sbjct: 264 ---------GRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDI--DDERLQK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 60/232 (25%)
Query: 93 PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD------GNTAFVEYSRLEDA 146
P+ P+ L+VG + V++ L E F G I + +D N A+V + +DA
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDA 65
Query: 147 AEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS 206
AL +N I G+ LR+ + + PS R+ G G F N
Sbjct: 66 EHALDTMNFDVIKGKPLRIMWSQRDPSLRKS-------------GMGNIFVKNLDK---- 108
Query: 207 HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP----SRNYSF 262
++ + L++ + FG I S+ Y F
Sbjct: 109 --------------------------SINNKALYDTVSAFGNILSCNVVCDENGSKGYGF 142
Query: 263 VEFRSVDEARRAKEGLQGRLFNDPRITI-MFSS-----SEL-APGKDYPGSY 307
V F + + A RA E + G L N ++ + F S +EL A K++P Y
Sbjct: 143 VHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVY 194
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 30/194 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L+
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQ 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDAR 185
R+ N + R
Sbjct: 372 EERQAYLTNEYMQR 385
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F G + + T S ++A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 69 LDTMNFDVIKGKPLRIMWSQ-RDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
+ D N + FV + E A A++ +NG + G ++ F+ SR+E
Sbjct: 128 CNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKV---FVGQFKSRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 108/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR+ Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDI--DDERLQK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 60/232 (25%)
Query: 93 PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD------GNTAFVEYSRLEDA 146
P+ P+ L+VG + V++ L E F G I + +D N A+V + +DA
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDA 65
Query: 147 AEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS 206
AL +N I G+ LR+ + + PS R+ G G F N
Sbjct: 66 EHALDTMNFDVIKGKPLRIMWSQRDPSLRKS-------------GMGNIFVKNLDK---- 108
Query: 207 HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP----SRNYSF 262
++ + L++ + FG I S+ Y F
Sbjct: 109 --------------------------SINNKALYDTVSAFGNILSCNVVCDENGSKGYGF 142
Query: 263 VEFRSVDEARRAKEGLQGRLFNDPRITI-MFSS-----SEL-APGKDYPGSY 307
V F + + A RA E + G L N ++ + F S +EL A K++P Y
Sbjct: 143 VHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVY 194
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 139/309 (44%), Gaps = 38/309 (12%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 125
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 126 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 185
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRR------E 176
D T F+ + + +A EA+K +NG++ G E + V F + PS++
Sbjct: 186 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKF-ANNPSQKVNHTILS 244
Query: 177 QWPNSHDAR-DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPSVQ 233
Q S + R GP+ + F S S G N G ++V Y +
Sbjct: 245 QLYQSPNRRYPGPLAQQAQRF--RFSPMTIDGMTSLAGINFPGHAGTGWCIFV-YNLAPD 301
Query: 234 MDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPR 287
DE +L FG + +K + + + FV + DEA A L G D
Sbjct: 302 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV 361
Query: 288 ITIMFSSSE 296
+ + F +S+
Sbjct: 362 LQVSFKTSK 370
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 36/272 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL TD L LF + GA+ K + FAF+ F A A A+ G
Sbjct: 39 LFVGNLDPAITDEFLATLFNQIGAVTKAKVCFDGMNDPFAFIEFGDHNQAGQALQAMNGR 98
Query: 80 DFRGNPIKIEFA---------RPAKPSKH--LWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+++ +A R + S+H ++VG +S V +L E FL FG++ + K
Sbjct: 99 SLLDREMRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSEAK 158
Query: 129 FLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
++D T FV Y R EDA A++ +NG+ +G +R ++ +P
Sbjct: 159 IIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGGERRD 218
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
G F + + N+ + ++VG + DE + A
Sbjct: 219 RGERGERRHYEKTFDEIY--------------NQTSADNTSVYVGQINQLTEDE--IRRA 262
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRA 274
FG I ++ + + Y+FV+F + A RA
Sbjct: 263 FDRFGPINEVRMFKVQGYAFVKFEQKEAAARA 294
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVED 68
+E +++VG+LS++ L+E F FG + + T ++ + FV + R ED
Sbjct: 122 QETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSEAKIIRDTATNKAKGYGFVSYPRRED 181
Query: 69 AKAAKDALQGSDFRGNPIKIEFA---------------------------------RPAK 95
A+ A + + G I+ +A + +
Sbjct: 182 AERAIEQMNGQWLGRRTIRTNWATRKPEEEGGGERRDRGERGERRHYEKTFDEIYNQTSA 241
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
+ ++VG I+Q ++++E+ F +FG I + + K AFV++ + E AA A+ +N
Sbjct: 242 DNTSVYVGQINQ-LTEDEIRRAFDRFGPINEVRMFKVQGYAFVKFEQKEAAARAIVQMNN 300
Query: 156 RQIGGEQLRVDFLRSQPS 173
+I G+Q+R + +S S
Sbjct: 301 AEIQGQQVRCSWGKSGES 318
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT+ DL + FG+FG + + S+ F FV F+ EDA A +A
Sbjct: 204 NNVFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFENAEDAAKAVEA 263
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G R +K F + K + +L++ + ++ E+L
Sbjct: 264 LNGKKIDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDEKL 323
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG I K ++D N + FV +S E+A+ AL +NG+ + + L V +
Sbjct: 324 KELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKIVVSKPLYVALAQ 383
Query: 170 SQPSRR 175
+ RR
Sbjct: 384 RKEDRR 389
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L A TD+ L +LF + G + V T+ S + +V + +DA A
Sbjct: 24 TTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARAL 83
Query: 74 DALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L + G+PI++ ++ + ++++ + + + + L + F FGNI K
Sbjct: 84 EMLNFTPLNGSPIRVMYSHRDPTIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 143
Query: 129 FLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQ 171
D FV++ E A +A++ +NG + +Q+ V FLR Q
Sbjct: 144 VATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQ 192
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 19/193 (9%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVE 67
D + S++L+VG+L D T+A L E+F G + + T S +A+V + +
Sbjct: 20 DTQVFSSASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQ 79
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKF 121
DA+AA ++L + +G+P +I ++ PS +++V + +++ + L + F F
Sbjct: 80 DAEAALESLNYIEIKGHPTRIMWSN-RDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHF 138
Query: 122 GNIEDFKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRR 175
G I K D + A FV Y E A EA++ +NG IGG+++ V FLR Q
Sbjct: 139 GPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDREG 198
Query: 176 EQWPNSHDARDGP 188
E+ + R+ P
Sbjct: 199 EEVFTNLYVRNFP 211
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 31/189 (16%)
Query: 8 FNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS---RSFAFVYFK 64
F R D + +NL+V N AD + L++ K+G + + R FAFV +K
Sbjct: 190 FLRKQDREGEEVFTNLYVRNFPADWNEEALRQFLEKYGEITSMMLKEDSKGRRFAFVNYK 249
Query: 65 RVEDAKAAKDAL-----------------QGSDFRGNPIKIEFARPA------KPSKHLW 101
E AK + L Q R N ++ +F + + + +L+
Sbjct: 250 EPEVAKEVVNTLNDLKLDESSEPLLVCPHQDKAKRQNLLRAQFNNSSMGQEDKRVTSNLY 309
Query: 102 VGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGR 156
+ + + E L E F FG I K + D N FV ++ ++A +A+ ++ +
Sbjct: 310 IKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAIAAMHLK 369
Query: 157 QIGGEQLRV 165
+ G+ L V
Sbjct: 370 LVKGKPLYV 378
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDAR 185
R+ N + R
Sbjct: 372 EERQAHLTNEYMQR 385
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F + G V T S S+A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + + F + + + G + D K L+ + P++ +
Sbjct: 179 --REAELGAKAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYV 263
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 211 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 270
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 271 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 330
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 331 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 390
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 391 KEERQAHLTNQYMQR 405
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 120 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 179
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L+E F KFG
Sbjct: 180 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 239
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 240 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 299
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 300 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 332
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 333 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 377
>gi|195035277|ref|XP_001989104.1| GH11539 [Drosophila grimshawi]
gi|193905104|gb|EDW03971.1| GH11539 [Drosophila grimshawi]
Length = 5843
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T ++L+ F FG + ++ ++AF + + A + G
Sbjct: 669 LFIGNLEKDITASELRGHFESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 728
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G + VS+ L+ F +FG + + A V Y
Sbjct: 729 LGSNRIKLGFGK-SMPTNCVWIDGCGEKVSESFLQSQFTRFGTVTKVSIDRTRQLALVLY 787
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + G +L+VDF
Sbjct: 788 DQVQNAQAAVKDMRGTIMRGRKLQVDF 814
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 117/302 (38%), Gaps = 76/302 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 567 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 626
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 627 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITASELRGH 686
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 687 FESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMPTNC 746
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
W I G G S
Sbjct: 747 -VW----------IDGCGEKVS-------------------------------------- 757
Query: 236 EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSS 295
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 758 ESFLQSQFTRFGTVTKVSIDRTRQLALVLYDQVQNAQAAVKDMRGTIMRGRKLQVDFASR 817
Query: 296 EL 297
E
Sbjct: 818 EC 819
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ +++ L+ F +FG + KV+ +R A V + +V++A+AA ++G
Sbjct: 743 PTNCVWIDGCGEKVSESFLQSQFTRFGTVTKVSIDRTRQLALVLYDQVQNAQAAVKDMRG 802
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 803 TIMRGRKLQVDFA 815
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N + D LKE+F K+G V + SR F FV F++ EDA A +
Sbjct: 191 TNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGKSRGFGFVSFEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G++ G + K E + + S++ L++ + T+ E+L
Sbjct: 251 INGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F + DA+ A
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVVKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N AFV + + A A++ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ +AFV+F+ + A A + +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + E+L+E F K+G
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDEMEDEQLKEMFEKYGKTLS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + + EDA +A++ ING ++ G+ + V + + R+ +
Sbjct: 220 VKVMTDSSGKSRGFGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKKMERQAELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + L++ +D++ L
Sbjct: 280 FELLKQERISRYQGVN--------------------------LYIKNLDDT-IDDEKLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Score = 43.1 bits (100), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 34/137 (24%)
Query: 218 GPPSKILWVGYPPSVQ---------------MDEQMLHNAMILFGEIERIKSYP----SR 258
G P +I+W PS++ +D + L++ FG I K S+
Sbjct: 79 GKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK 138
Query: 259 NYSFVEFRSVDEARRAKEGLQGRLFNDPRITI-MFSS-----SEL-APGKDYPGSYSGTK 311
Y+FV F + D A RA E + G L ND ++ + F S +EL A K++ Y
Sbjct: 139 GYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKN- 197
Query: 312 GPRSEMFFGDQIRPSQL 328
FGD++ QL
Sbjct: 198 -------FGDEMEDEQL 207
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ TTD DLK FG++G + S+ F FV F+ +DA A ++
Sbjct: 199 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVES 258
Query: 76 LQGSDF---------------RGNPIKIEFARPAKP------SKHLWVGGISQTVSKEEL 114
L G F R +++ + + K S +L+V + ++S E+L
Sbjct: 259 LNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKL 318
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG + K ++D N + FV ++ E+A EA+ ++G+ I + L V +
Sbjct: 319 KEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQ 378
Query: 170 SQPSRR 175
+ RR
Sbjct: 379 RKEDRR 384
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 70/292 (23%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + TD+ L + FG+ G + V T S + +V F +DA A
Sbjct: 19 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 78
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
L G PI++ ++ PS ++++ + +++ + L + F FGNI
Sbjct: 79 QELNYIPLYGKPIRVMYSH-RDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSC 137
Query: 128 KFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D + FV+Y+ E A +A++ +NG + +Q+ V FLR Q R+ N
Sbjct: 138 KVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQ--ERDSTANK 195
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
T F++ Y ++ +S+ + L N
Sbjct: 196 ------------TKFTN---VYVKNLAESTTDDD-----------------------LKN 217
Query: 242 AMILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
A FGE +I S S+ + FV F + D+A RA E L G F+D
Sbjct: 218 A---FGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDD 266
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYSS---RSFAFVYFKRVEDAKAAKD 74
+ N+++ NL L + F FG + KV SS + + FV + E A+ A +
Sbjct: 107 AGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIE 166
Query: 75 ALQGSDFRGNPIKI-------EFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIE 125
L G + + E A +K +++V ++++ + ++L+ F ++G I
Sbjct: 167 KLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKIT 226
Query: 126 DFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
+KDG FV + +DAA A++++NG + ++ V + + R +
Sbjct: 227 SAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETEL 284
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKD 74
SSNL+V NL +D LKE+F FG + +S+ FV F E+A A
Sbjct: 301 SSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMS 360
Query: 75 ALQGSDFRGNPIKIEFAR 92
L G P+ + A+
Sbjct: 361 QLSGKMIESKPLYVAIAQ 378
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 126 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 185
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 186 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 245
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + V +
Sbjct: 246 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQR 305
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N H R
Sbjct: 306 KEERQAHLTNQHMQR 320
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 35 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 94
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 95 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 154
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 155 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 214
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 215 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 247
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 248 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 292
>gi|327305247|ref|XP_003237315.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
gi|326460313|gb|EGD85766.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
Length = 293
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFG-ALDKVTTYSSRS----FAFVYFKRVEDAK 70
E P + ++VGN+ D T ADLKE K+G L Y SR F +V F+ VE+AK
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYDSRGLSRGFGYVKFESVEEAK 136
Query: 71 AAKDALQGSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLK 120
A D + S++ G + + FA R +P++ ++VG I+ V+ +L F
Sbjct: 137 KAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRKMEPTRTIFVGNIAHQVTDRDLHALFDD 196
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
N+ D + D T A E++ +E A + + G+ G LR+D+ S +R
Sbjct: 197 IPNVFDVRVAVDRRTGMPRGFAHAEFTDVESAIAGFEMLKGQAPYGRPLRLDY--SHSAR 254
Query: 175 R 175
R
Sbjct: 255 R 255
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKF-------GALDKVTTYSSRSFAFVYFKRVE 67
++ P+ ++VGN++ TD DL LF A+D+ T R FA F VE
Sbjct: 168 RKMEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMP-RGFAHAEFTDVE 226
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAK 95
A A + L+G G P++++++ A+
Sbjct: 227 SAIAGFEMLKGQAPYGRPLRLDYSHSAR 254
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 61/293 (20%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFVY 62
+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELE 115
F DA AA A+ G G +K+ +A K H++VG +S ++ E+++
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 116 EGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 170 SQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
+P + Q N+ R ++ N+ P + ++ G
Sbjct: 181 RKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYCG 216
Query: 228 YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 217 GIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 268
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 104 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 163
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 164 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 223
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 224 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 283
Query: 171 QP 172
P
Sbjct: 284 SP 285
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 204 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 263
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 264 VSVNGTTIEGHVVKCYWGK 282
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 61/293 (20%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFVY 62
+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELE 115
F DA AA A+ G G +K+ +A K H++VG +S ++ E+++
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 116 EGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 170 SQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
+P + Q N+ R ++ N+ P + ++ G
Sbjct: 181 RKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYCG 216
Query: 228 YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 217 GIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 268
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 104 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 163
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 164 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 223
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 224 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 283
Query: 171 QP 172
P
Sbjct: 284 SP 285
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 42/79 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 204 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 263
Query: 74 DALQGSDFRGNPIKIEFAR 92
++ G+ G+ +K + +
Sbjct: 264 VSVNGTTIEGHVVKCYWGK 282
>gi|386768866|ref|NP_001245816.1| split ends, isoform D [Drosophila melanogaster]
gi|442624893|ref|NP_001259804.1| split ends, isoform E [Drosophila melanogaster]
gi|383291252|gb|AFH03493.1| split ends, isoform D [Drosophila melanogaster]
gi|440213050|gb|AGB92341.1| split ends, isoform E [Drosophila melanogaster]
Length = 5505
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 603 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 662
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 663 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 721
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 722 DQVQNAQAAVKDMRGTILRRKKLQVDF 748
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 118/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 501 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 560
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 561 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 620
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 621 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 677
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 678 ---------------------------------------------TNCVWIDGV--DEKV 690
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 691 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 750
Query: 295 SEL 297
E
Sbjct: 751 REC 753
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 677 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 736
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 737 TILRRKKLQVDFA 749
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 61/293 (20%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFVY 62
+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 48 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 107
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELE 115
F DA AA A+ G G +K+ +A K H++VG +S ++ E+++
Sbjct: 108 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 167
Query: 116 EGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 168 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 227
Query: 170 SQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
+P + Q N+ R ++ N+ P + ++ G
Sbjct: 228 RKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYCG 263
Query: 228 YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 264 GIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 315
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 151 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 210
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 211 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 270
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 271 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTAIEGHVVKCYWGKE 330
Query: 171 QP 172
P
Sbjct: 331 SP 332
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F++ EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPIIG----RG--TGF-------SDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + R +G+ + NH+AY +P S + R R
Sbjct: 372 EERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAY---YPPSQIARLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P+++L+VG+L D T+A L E F G + D +T SS ++A+V F+ +DA+
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSS-NYAYVNFQHPKDAEH 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
A D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQ-HDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNIL 126
Query: 126 DFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N + FV + E A A++ +NG + ++ V +S+ R
Sbjct: 127 SCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKER 179
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 106/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + + EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDGI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|442624888|ref|NP_001259802.1| split ends, isoform G [Drosophila melanogaster]
gi|440213048|gb|AGB92339.1| split ends, isoform G [Drosophila melanogaster]
Length = 5487
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 603 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 662
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 663 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 721
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 722 DQVQNAQAAVKDMRGTILRRKKLQVDF 748
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 118/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 501 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 560
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 561 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 620
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 621 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 677
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 678 ---------------------------------------------TNCVWIDGV--DEKV 690
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 691 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 750
Query: 295 SEL 297
E
Sbjct: 751 REC 753
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 677 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 736
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 737 TILRRKKLQVDFA 749
>gi|348544593|ref|XP_003459765.1| PREDICTED: RNA-binding protein 4.1-like [Oreochromis niloticus]
Length = 380
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ + T +L+ELF K+G + + +++ FV+ + +A+ A L
Sbjct: 4 IFIGNLACNATAEELRELFEKYGKVTECDI--VKNYGFVHMSNMSEAEEAIKNLHQHQLH 61
Query: 83 GNPIKIEFA--RPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
G + +E + RP +K L V + + V+ E L F +FG + + +KD AFV
Sbjct: 62 GWRMNVEMSKGRPKSTTK-LHVSNLGEGVTSEVLRARFEEFGPVVECDIVKD--YAFVHM 118
Query: 141 SRLEDAAEALKNINGRQIGGE----QLRVDFLRSQPSRREQW------PNSHDARDGPII 190
R+EDA EA+ N++ G+ QL LR+ P + H ++D P +
Sbjct: 119 ERVEDAMEAISNLDNTAFKGKLMSVQLSTSRLRTAPGMGNHTGCFVCGKHGHWSKDCP-V 177
Query: 191 GRGTGFSDN---HSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQ 233
GR +SD+ H A+ H S G P+ ++G P Q
Sbjct: 178 GRNGSYSDSMRGHGAWAPPHDPPSYGSYGMASPAAADYMGGPAYSQ 223
>gi|350416927|ref|XP_003491172.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein lark-like
[Bombus impatiens]
Length = 458
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+ T++AD+K LF K+G + V +++ FV+ + E + A L G
Sbjct: 106 IFIGNLADKTSNADIKPLFEKYGKV--VECDVVKNYGFVHMENEEAGRNAIQNLNGHIVH 163
Query: 83 GNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G PIK E A+ P P+ ++VG ++ ++ E F K+G + + ++ N FV
Sbjct: 164 GQPIKCEAAKSRKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVR--NYGFV 221
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFS 197
D +A+K +NG+ + G+ ++V SR Q P D GRG +S
Sbjct: 222 HLEATGDVNDAIKELNGQMVDGQPMKVQI---STSRVRQRPGMGDPEQCYRCGRGGHWS 277
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ ++VGNL+ +T ++ELF K+G + V R++ FV+ + D A L G
Sbjct: 181 PTTKIFVGNLTDNTKAPQVRELFAKYGTV--VECDIVRNYGFVHLEATGDVNDAIKELNG 238
Query: 79 SDFRGNPIKIEFA 91
G P+K++ +
Sbjct: 239 QMVDGQPMKVQIS 251
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + V +
Sbjct: 240 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQR 299
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N H R
Sbjct: 300 KEERQAHLTNQHMQR 314
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 88
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 89 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 148
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 149 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 208
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 209 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 241
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 242 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 286
>gi|6467825|gb|AAF13218.1|AF188205_1 Spen RNP motif protein long isoform [Drosophila melanogaster]
Length = 5533
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 658 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 717
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 718 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 776
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 777 DQVQNAQAAVKDMRGTILRRKKLQVDF 803
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 117/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 556 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 615
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 616 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 675
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 676 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 732
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G V
Sbjct: 733 ---------------------------------------------TNCVWIDGVDEKV-- 745
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 746 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 805
Query: 295 SEL 297
E
Sbjct: 806 REC 808
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 732 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 791
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 792 TILRRKKLQVDFA 804
>gi|409046171|gb|EKM55651.1| hypothetical protein PHACADRAFT_256428 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1287
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 51/202 (25%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ- 77
P+ +LW+GNL + T L +F +GA++ + + FV F DA AKD +
Sbjct: 443 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 502
Query: 78 --GSDF---RGNPIKIEFAR-------PAK------------------------------ 95
G D G ++I F + PAK
Sbjct: 503 RLGGDIGMPNGQTVRIGFGKADSAPVAPAKGTNLNSPVATSPGGNVSKNASNAGLAGMDA 562
Query: 96 -----PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEAL 150
P++ LW+G I T + + F FG IE + L N F+ + RL+DA A
Sbjct: 563 QLQSTPTRALWIGSIPSTTTPATILSVFSPFGPIESARVLTHKNCGFINFERLDDAVRAR 622
Query: 151 KNINGRQIGGEQ---LRVDFLR 169
K +NGR + G +R+ F +
Sbjct: 623 KALNGRDVLGSDVGAIRIGFAK 644
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + +V+ E+L F +G IE + L + FV + DA A ++
Sbjct: 443 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 502
Query: 156 RQIG------GEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
R G G+ +R+ F ++ + P + P+ T N S +
Sbjct: 503 RLGGDIGMPNGQTVRIGFGKADSA--PVAPAKGTNLNSPV---ATSPGGNVSKNASNAGL 557
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
+ + P++ LW+G PS +L + FG IE + +N F+ F +D
Sbjct: 558 AGMDAQLQSTPTRALWIGSIPSTTTPATIL-SVFSPFGPIESARVLTHKNCGFINFERLD 616
Query: 270 EARRAKEGLQGR 281
+A RA++ L GR
Sbjct: 617 DAVRARKALNGR 628
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F FG ++ + ++ F+ F+R++DA A+ A
Sbjct: 565 QSTPTRALWIGSIPSTTTPATILSVFSPFGPIESARVLTHKNCGFINFERLDDAVRARKA 624
Query: 76 LQGSDFRGN---PIKIEFAR 92
L G D G+ I+I FA+
Sbjct: 625 LNGRDVLGSDVGAIRIGFAK 644
>gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]
Length = 412
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 38/217 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + A DD + +NL V L + T + + LFG G + DK+T
Sbjct: 36 CPSPMQTGAATDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 90
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 91 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 150
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 151 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 210
Query: 164 RVDF---------------LRSQPSRREQWPNSHDAR 185
V F L P+RR P H A+
Sbjct: 211 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQ 247
>gi|24580581|ref|NP_524718.2| split ends, isoform B [Drosophila melanogaster]
gi|10727420|gb|AAF51534.2| split ends, isoform B [Drosophila melanogaster]
Length = 5533
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 658 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 717
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 718 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 776
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 777 DQVQNAQAAVKDMRGTILRRKKLQVDF 803
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 117/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 556 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 615
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 616 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 675
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 676 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 732
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G V
Sbjct: 733 ---------------------------------------------TNCVWIDGVDEKV-- 745
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 746 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 805
Query: 295 SEL 297
E
Sbjct: 806 REC 808
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 732 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 791
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 792 TILRRKKLQVDFA 804
>gi|24580579|ref|NP_722615.1| split ends, isoform A [Drosophila melanogaster]
gi|46397733|sp|Q8SX83.2|SPEN_DROME RecName: Full=Protein split ends
gi|10727421|gb|AAF51535.2| split ends, isoform A [Drosophila melanogaster]
Length = 5560
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 658 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 717
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 718 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 776
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 777 DQVQNAQAAVKDMRGTILRRKKLQVDF 803
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 118/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 556 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 615
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 616 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 675
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 676 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 732
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 733 ---------------------------------------------TNCVWIDGV--DEKV 745
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 746 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 805
Query: 295 SEL 297
E
Sbjct: 806 REC 808
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 732 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 791
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 792 TILRRKKLQVDFA 804
>gi|296226907|ref|XP_002759113.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Callithrix jacchus]
Length = 604
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 159 TNVYIKNFGEDMDDEHLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDV 218
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 219 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 278
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 279 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 338
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 339 KEERQAHLTNLYMQR 353
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 61/278 (21%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L T+A L E F G + + T+ S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPYVTEAMLFEKFSPAGPILSIRVCRDMITHRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
D + +G P++I +++ PS L G+ V E +G+
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPS--LRKSGV---VCDENGPKGY-------------- 108
Query: 133 GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGR 192
FV + E A A++ +NG + ++ V + SR+E R+ + R
Sbjct: 109 ---GFVHFETQEAAERAIEKMNGMLLNDRKVFVGPFK---SRKE--------REAELGAR 154
Query: 193 GTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERI 252
F++ + + G + D K L+ + P++ + ++
Sbjct: 155 AKEFTNVYI--------KNFGEDMDDEHLKDLFGKFGPALSV-------------KVMTD 193
Query: 253 KSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
+S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 194 ESGKSKGFGFVSFERHEDAQKAVDVMNGKELNGKQIYV 231
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 195 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 254
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 255 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 314
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 315 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 374
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 375 KEERQAHLTNQYMQR 389
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 53/292 (18%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P ++L+VG+L D T+A L E F G + DK+T S +A+V +++ DAK
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITR-RSLGYAYVNYQQPVDAKR 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPSKHLWVGG---------ISQTVSKEELEEGFLKFG 122
A + L +G P++I +++ + VGG + +++ + L + F FG
Sbjct: 68 ALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYDTFSAFG 127
Query: 123 NIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
NI K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE-- 182
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 183 ------REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV---- 224
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 225 ---------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 267
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 104 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 163
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 164 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 223
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 224 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 283
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 284 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 316
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 317 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 361
>gi|442624895|ref|NP_001259805.1| split ends, isoform F [Drosophila melanogaster]
gi|440213051|gb|AGB92342.1| split ends, isoform F [Drosophila melanogaster]
Length = 5510
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 608 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 667
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 668 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 726
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 727 DQVQNAQAAVKDMRGTILRRKKLQVDF 753
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 118/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 506 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 565
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 566 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 625
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 626 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 682
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 683 ---------------------------------------------TNCVWIDGV--DEKV 695
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 696 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 755
Query: 295 SEL 297
E
Sbjct: 756 REC 758
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 682 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 741
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 742 TILRRKKLQVDFA 754
>gi|6979936|gb|AAF34661.1|AF221715_1 split ends long isoform [Drosophila melanogaster]
Length = 5554
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 652 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 711
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 712 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 770
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 771 DQVQNAQAAVKDMRGTILRRKKLQVDF 797
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 118/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 550 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 609
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 610 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 669
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 670 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 726
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 727 ---------------------------------------------TNCVWIDGV--DEKV 739
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 740 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 799
Query: 295 SEL 297
E
Sbjct: 800 REC 802
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 726 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 785
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 786 TILRRKKLQVDFA 798
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRVVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 57/288 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-------SRSFAFVYFKRVEDAKAAKD 74
N+++ NL D+K L+ F A + + S+ + FV+F+ E A+ A +
Sbjct: 100 NIFIKNLDKSI---DIKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIE 156
Query: 75 ALQGSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGN 123
+ G + + E AK ++++ + + E L++ F KFG
Sbjct: 157 KMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGP 216
Query: 124 IEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 217 ALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 276
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
+ I R G + V DG +D++
Sbjct: 277 KRKFEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDER 309
Query: 239 LHNAMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
L FG I K S+ + FV F S +EA +A + GR+
Sbjct: 310 LRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRV 357
>gi|410921400|ref|XP_003974171.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 4-like [Takifugu
rubripes]
Length = 414
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 144/354 (40%), Gaps = 69/354 (19%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 67 CPSPMQTGPTNDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 121
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 122 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 181
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------------------AFVEYSRLEDAAEALKNI 153
+ELE+ F ++G I + L D T F+ + + +A EA+K +
Sbjct: 182 KELEQLFSQYGRIITSRILVDQVTGARVCLXSSGPAGGSRGVGFIRFDKRVEAEEAIKGL 241
Query: 154 NGRQIGG--EQLRVDF---------------LRSQPSRREQWPNSHDARDGPIIGRGTGF 196
NG++ G E + V F L P+RR P H A+ R
Sbjct: 242 NGQKPSGAAEPITVKFANNPSQKTSQALLSQLYQSPNRRYPGPLHHQAQR----FRLDNL 297
Query: 197 SDNHSAYKRSHP------QSSVGRNRDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGE 248
+ KR P S VG N G ++V Y S DE +L FG
Sbjct: 298 LNMAYGVKRFSPITIDSMTSLVGMNIPGHTGTGWCIFV-YNLSPDSDESVLWQLFGPFGA 356
Query: 249 IERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ +K + + + FV + DEA A L G D + + F +++
Sbjct: 357 VNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 410
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPIIG----RG--TGF-------SDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + R +G+ + NH+AY +P S + + R
Sbjct: 372 EERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAY---YPPSQIAQLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F G + + T S ++A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 69 LDTMNFDVIKGKPLRIMWSQ-RDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
+ D N + FV + E A A++ +NG + G ++ F+ SR+E
Sbjct: 128 CNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKV---FVGQFKSRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 108/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI------------------ 261
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+GR + + KR+ Q R + + D++ L
Sbjct: 262 -------YVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 60/232 (25%)
Query: 93 PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD------GNTAFVEYSRLEDA 146
P+ P+ L+VG + V++ L E F G I + +D N A+V + +DA
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDA 65
Query: 147 AEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS 206
AL +N I G+ LR+ + + PS R+ G G F N
Sbjct: 66 EHALDTMNFDVIKGKPLRIMWSQRDPSLRKS-------------GMGNIFVKNLDK---- 108
Query: 207 HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP----SRNYSF 262
++ + L++ + FG I S+ Y F
Sbjct: 109 --------------------------SINNKALYDTVSAFGNILSCNVVCDENGSKGYGF 142
Query: 263 VEFRSVDEARRAKEGLQGRLFNDPRITI-MFSS-----SEL-APGKDYPGSY 307
V F + + A RA E + G L N ++ + F S +EL A K++P Y
Sbjct: 143 VHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVY 194
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 50/315 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +L+ LF G + DKV +S + FV + +DA+ A
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHS-LGYGFVNYLNAKDAERAI 78
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ FARP+ S +L++ G+ +T++++++E+ FL FG+I + + L
Sbjct: 79 NTLNGLRLQSKTIKVSFARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVL 138
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF-----------LRSQ 171
D T AF+ + + +A EA+ + NG + G E + V F L SQ
Sbjct: 139 VDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANPNQNKNVALLSQ 198
Query: 172 ----PSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
P+RR P H A+ G D+ S+ SSV ++V
Sbjct: 199 ICHSPARRFGGPVHHQAQRFRFSPMGV---DHMSSI------SSVNVASSATSGWCIFV- 248
Query: 228 YPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGR 281
Y DE +L FG + +K + + + FV + +EA A L G
Sbjct: 249 YNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGY 308
Query: 282 LFNDPRITIMFSSSE 296
D + + F +S+
Sbjct: 309 RLGDKTLQVSFKTSK 323
>gi|24580583|ref|NP_722616.1| split ends, isoform C [Drosophila melanogaster]
gi|6715140|gb|AAF26299.1|AF184612_1 split ends [Drosophila melanogaster]
gi|22945598|gb|AAN10511.1| split ends, isoform C [Drosophila melanogaster]
Length = 5476
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 601 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 660
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 661 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 719
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 720 DQVQNAQAAVKDMRGTILRRKKLQVDF 746
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 118/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 499 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 558
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 559 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 618
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 619 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 675
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 676 ---------------------------------------------TNCVWIDGV--DEKV 688
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 689 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 748
Query: 295 SEL 297
E
Sbjct: 749 REC 751
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 675 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 734
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 735 TILRRKKLQVDFA 747
>gi|194386544|dbj|BAG61082.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 159 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 218
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 219 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 278
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 279 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 338
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 339 KEERQAHLTNQYMQR 353
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 47/248 (18%)
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKI-----------EFARPAKPSKHLWVG 103
S+ + FV+F+ E A+ A + + G + + E AK ++++
Sbjct: 105 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 164
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQI 158
+ + E L++ F KFG K + D + FV + R EDA +A+ +NG+++
Sbjct: 165 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 224
Query: 159 GGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDG 218
G+Q+ V + + R+ + + I R G + V DG
Sbjct: 225 NGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVN------------LYVKNLDDG 272
Query: 219 PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY----PSRNYSFVEFRSVDEARRA 274
+D++ L FG I K S+ + FV F S +EA +A
Sbjct: 273 ---------------IDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKA 317
Query: 275 KEGLQGRL 282
+ GR+
Sbjct: 318 VTEMNGRI 325
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 117/278 (42%), Gaps = 61/278 (21%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD 132
D + +G P++I +++ PS L G+ V E +G+
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPS--LRKSGV---VCDENGSKGY-------------- 108
Query: 133 GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGR 192
FV + E A A++ +NG + ++ V + SR+E R+ + R
Sbjct: 109 ---GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE--------REAELGAR 154
Query: 193 GTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERI 252
F++ + + G + D K L+ + P++ + ++
Sbjct: 155 AKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------------KVMTD 193
Query: 253 KSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
+S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 194 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 231
>gi|442624890|ref|NP_001259803.1| split ends, isoform H [Drosophila melanogaster]
gi|440213049|gb|AGB92340.1| split ends, isoform H [Drosophila melanogaster]
Length = 5458
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 601 LFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 660
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 661 LGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLY 719
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + ++L+VDF
Sbjct: 720 DQVQNAQAAVKDMRGTILRRKKLQVDF 746
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 118/303 (38%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 499 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 558
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 559 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 618
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 619 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 675
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 676 ---------------------------------------------TNCVWIDGV--DEKV 688
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 689 SESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFAS 748
Query: 295 SEL 297
E
Sbjct: 749 REC 751
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 675 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 734
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 735 TILRRKKLQVDFA 747
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 35/271 (12%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL A T+ L LFG+ G + + +AF+ F A A A+
Sbjct: 10 LYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGNDPYAFLEFTNHASAATALAAMNRR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F +K+ +A P K H++VG +S + L E F FG I + + ++
Sbjct: 70 VFLEKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + DA A++ +NG+ +G +R ++ +P +
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTK---------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
GP G S+ + P N+ P + ++ G S + E+++ +
Sbjct: 180 -GPNEGA-------PSSKRVKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEELMQSTFSQ 231
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
FG+I+ ++ + + Y+F+ F + + A A E
Sbjct: 232 FGQIQDVRVFRDKGYAFIRFTTKEAAAHAIE 262
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 36/180 (20%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + DA+AA A
Sbjct: 97 HIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 156
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----------------------------HLWVGGIS 106
+ G I+ ++ P+K ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPTKGPNEGAPSSKRVKQPTFDEVYNQSSPTNTTVYCGGFT 216
Query: 107 QTVSKEEL-EEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
V EEL + F +FG I+D + +D AF+ ++ E AA A++ + +I G ++
Sbjct: 217 SNVITEELMQSTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKC 276
>gi|402853087|ref|XP_003891234.1| PREDICTED: msx2-interacting protein [Papio anubis]
Length = 3498
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + FAF + ++ + +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQFAFPQYCDIDIVRKVIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++V F
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVTF 586
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALK 151
++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +A
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQKAHN 64
Query: 152 NINGRQIGGEQLRVDF 167
++N ++G LR D+
Sbjct: 65 SVN--KMGDRDLRTDY 78
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSKH------LWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS H +++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 61/293 (20%)
Query: 24 WVGNLSADTTDADLKELFGKFGALDKVTTY---------------------SSRSFAFVY 62
+VGNLS D T+ + +LF + G S+ + FV
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELE 115
F DA AA A+ G G +K+ +A K H++VG +S ++ E+++
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 116 EGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
F FG I D + +KD T FV + DA A+ ++ G+ +GG Q+R ++
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 170 SQPS--RREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
+P + Q N+ R ++ N+ P + ++ G
Sbjct: 181 RKPPAPKSTQENNTKQLRFEDVV------------------------NQSSPKNCTVYCG 216
Query: 228 YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
S + +Q++ FG+I I+ +P + YSFV F + + A A + G
Sbjct: 217 GIAS-GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNG 268
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 104 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 163
Query: 76 LQGSDFRGNPIKIEFA--RPAKP-------SKHL----------------WVGGISQTVS 110
+ G G I+ +A +P P +K L + GGI+ ++
Sbjct: 164 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 223
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ + + F FG I + + + +FV +S E AA A+ ++NG I G ++ + +
Sbjct: 224 DQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 283
Query: 171 QP 172
P
Sbjct: 284 SP 285
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 43/81 (53%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +P + ++ G +++ TD +++ F FG + ++ + + ++FV F E A A
Sbjct: 204 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 263
Query: 74 DALQGSDFRGNPIKIEFARPA 94
++ G+ G+ +K + + +
Sbjct: 264 VSVNGTTIEGHVVKCYWGKES 284
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 124/301 (41%), Gaps = 40/301 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL ++ L LF + G + + +AFV F + A A A+
Sbjct: 10 LYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTALAAMNKR 69
Query: 80 DFRGNPIKIEFA-----RPAKPSK---HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F +K+ +A +P + + H++VG +S + E L E F FG I + + ++
Sbjct: 70 LFLDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + +A A++ +NG+ +G +R ++ +P P + A
Sbjct: 130 DPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPP----PKTEKA- 184
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
A + P N+ P + ++ G + + E ++
Sbjct: 185 ----------------AQRAKQPTFDEVYNQSSPTNCTVYCG-GFTTGLTEDLMQKTFSQ 227
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPG 305
FG I+ I+ + + Y+F++F + + A A E + N + + G D PG
Sbjct: 228 FGVIQDIRVFKDKGYAFIKFATKESATHAIETIHNTEINGQMVKCFWGKENGGMGAD-PG 286
Query: 306 S 306
+
Sbjct: 287 A 287
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 32/176 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + +A+ A A
Sbjct: 97 HIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQA 156
Query: 76 LQGSDFRGNPIKIEFA--RPAKPSKH------------------------LWVGGISQTV 109
+ G I+ ++ +P P ++ GG + +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTFDEVYNQSSPTNCTVYCGGFTTGL 216
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+++ +++ F +FG I+D + KD AF++++ E A A++ I+ +I G+ ++
Sbjct: 217 TEDLMQKTFSQFGVIQDIRVFKDKGYAFIKFATKESATHAIETIHNTEINGQMVKC 272
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 3 PPPSKFNRA--------YDD---KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT 51
PPP K +A +D+ + +P + ++ G + T+ +++ F +FG + +
Sbjct: 176 PPPPKTEKAAQRAKQPTFDEVYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIR 235
Query: 52 TYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFAR 92
+ + +AF+ F E A A + + ++ G +K + +
Sbjct: 236 VFKDKGYAFIKFATKESATHAIETIHNTEINGQMVKCFWGK 276
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|328789990|ref|XP_392307.4| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Apis
mellifera]
Length = 664
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 22/187 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGA-LDKVTTYSS-------RSFAFVYFKRVEDAK 70
P+ L+VGN+ ++ E FGK A L +V YSS R F F+ ++ + A
Sbjct: 242 PNLRLFVGNIPKSKGKEEILEEFGKLTAGLTEVIIYSSPDDKKKNRGFCFLEYESHKAAS 301
Query: 71 AAKDALQGSDFR--GNPIKIEFARPAK--------PSKHLWVGGISQTVSKEELEEGFLK 120
AK L + G I +++A P + + L+V ++Q S+E+L+E F +
Sbjct: 302 LAKRRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKESFEQ 361
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR--SQPSRREQW 178
+GNIE K +KD AFV + ++A +A+ +NG++IGG + V + S ++E+
Sbjct: 362 YGNIERVKKIKD--YAFVHFEERDNAVKAMNELNGKEIGGSHIEVSLAKPPSDKKKKEEM 419
Query: 179 PNSHDAR 185
+ + R
Sbjct: 420 LRARERR 426
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|350409228|ref|XP_003488661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Bombus
impatiens]
Length = 664
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 22/187 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGA-LDKVTTYSS-------RSFAFVYFKRVEDAK 70
P+ L+VGN+ ++ E FGK A L +V YSS R F F+ ++ + A
Sbjct: 242 PNLRLFVGNIPKSKGKEEILEEFGKLTAGLTEVIIYSSPDDKKKNRGFCFLEYESHKAAS 301
Query: 71 AAKDALQGSDFR--GNPIKIEFARPAK--------PSKHLWVGGISQTVSKEELEEGFLK 120
AK L + G I +++A P + + L+V ++Q S+E+L+E F +
Sbjct: 302 LAKRRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKESFEQ 361
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR--SQPSRREQW 178
+GNIE K +KD AFV + ++A +A+ +NG++IGG + V + S ++E+
Sbjct: 362 YGNIERVKKIKD--YAFVHFEERDNAVKAMNELNGKEIGGSHIEVSLAKPPSDKKKKEEM 419
Query: 179 PNSHDAR 185
+ + R
Sbjct: 420 LRARERR 426
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV-TTYS----SRSFAFVYF 63
NR K P + L++GNL + T LK +F +FG ++ V Y SR FA+V +
Sbjct: 124 NRERTPKNIEPHNVLYIGNLYYEVTPDQLKRVFSRFGDIESVRMVYDNRGLSRGFAYVEY 183
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEF--------------ARPAKPSKHLWVGGISQTV 109
K V DA+AA D L F G + +++ P P+K L++G +S +
Sbjct: 184 KNVSDAQAAIDNLDMQVFEGRNLVVQYHSPKYQTTKARSPNGEPNPPTKTLFIGNMSFEM 243
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQL 163
S ++L + F N+ D + D T A ++ + A A + + + I G QL
Sbjct: 244 SDKDLNDLFRDIRNVTDVRVAIDRRTGQPRGFAHADFIDVASATRAKEVLKEKIIYGRQL 303
Query: 164 RVDF 167
RVDF
Sbjct: 304 RVDF 307
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 53/216 (24%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEA 149
+P L++G + V+ ++L+ F +FG+IE + + D A+VEY + DA A
Sbjct: 133 EPHNVLYIGNLYYEVTPDQLKRVFSRFGDIESVRMVYDNRGLSRGFAYVEYKNVSDAQAA 192
Query: 150 LKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHS-AYKRSHP 208
+ N++ + G L V + HS Y+ +
Sbjct: 193 IDNLDMQVFEGRNLVVQY--------------------------------HSPKYQTTKA 220
Query: 209 QSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERI---------KSYPSRN 259
+S G PP+K L++G S +M ++ L++ LF +I + ++ R
Sbjct: 221 RSPNGE--PNPPTKTLFIG-NMSFEMSDKDLND---LFRDIRNVTDVRVAIDRRTGQPRG 274
Query: 260 YSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSS 295
++ +F V A RAKE L+ ++ ++ + FS+S
Sbjct: 275 FAHADFIDVASATRAKEVLKEKIIYGRQLRVDFSTS 310
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 132/289 (45%), Gaps = 51/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P ++L+VG+L D T+A L E F G + DK+T S +A+V +++ D++
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITR-RSLGYAYVNYQQPRDSER 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
A D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 126 DFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 127 SCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE----- 178
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 ---REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV------- 220
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|198436066|ref|XP_002132189.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
intestinalis]
Length = 743
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 11 AYDDKEAPPSSN------LWVGNLSADTTDADLKELFGKFGALDKVTTYSSR----SFAF 60
++ DK PP + L+VGNL D ++ D++++F +G +D + + S+ F
Sbjct: 265 SFMDKAIPPEDDPYATRTLFVGNLEPDVSNYDIRKVFEVYGRVDDIDVKRAARGLGSYCF 324
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLK 120
V F ++ A AK +L G N +++ + + SK +WVGG+ + +LE F +
Sbjct: 325 VRFSNLDQAYKAKISLNGKAVIKNVVRVGYGKVMLSSK-VWVGGLGSWTTLSDLEREFDR 383
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQI--GGEQLRVDFLRSQP 172
FG I F K ++ + Y ++ A A + G + +LR+DFL +P
Sbjct: 384 FGAIRRIDFRKGDTSSAILYETIDAAQAACNQMRGFLMPNAETRLRMDFLDPEP 437
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKE+FGK+G V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + K E + +++ L+V + + E L
Sbjct: 251 MYGKDMNGKSMFVGRAQKKVERQTELKRKFEQMNQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ FL FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGRPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N + FV + E A A+ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKER 179
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A D +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ ++ E L+E F K+G
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALS 219
Query: 127 FKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D N FV + R EDA +A+ + G+ + G+ + V + + R+ +
Sbjct: 220 VKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMYGKDMNGKSMFVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ + I R G + V DG +D++ L
Sbjct: 280 FEQMNQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
+ FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFLPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRV 66
+ E P ++ L+ GNL + A L + ++G+ + V T SR FAFV +
Sbjct: 99 ETNEIPVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSI 158
Query: 67 EDAKAAKDALQGSDFRGNPIKIEFARPAKPSK--------HLWVGGISQTVSKEELEEGF 118
ED A + L S + G +++ F+ KP + L+VG +S + + E L + F
Sbjct: 159 EDCNAVIENLDESQYMGRILRVNFSDNPKPKEPLYPETEYKLFVGNLSWSATSESLTQAF 218
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
++GN+ + L DG T FV YS + AL +++G ++ G LRV +
Sbjct: 219 QEYGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALVSLDGVELEGRALRVSLAEGRK 278
Query: 173 S 173
S
Sbjct: 279 S 279
>gi|335775987|gb|AEH58755.1| polyadenylate-binding protein 1-like protein [Equus caballus]
Length = 510
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 65 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 124
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 125 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 184
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 185 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 244
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 245 KEERQAHLTNQYMQR 259
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 47/248 (18%)
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKI-----------EFARPAKPSKHLWVG 103
S+ + FV+F+ E A+ A + + G + + E AK ++++
Sbjct: 11 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 70
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQI 158
+ + E L++ F KFG K + D + FV + R EDA +A+ +NG+++
Sbjct: 71 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKEL 130
Query: 159 GGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDG 218
G+Q+ V + + R+ + + I R G + V DG
Sbjct: 131 NGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVN------------LYVKNLDDG 178
Query: 219 PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY----PSRNYSFVEFRSVDEARRA 274
+D++ L FG I K S+ + FV F S +EA +A
Sbjct: 179 ---------------IDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKA 223
Query: 275 KEGLQGRL 282
+ GR+
Sbjct: 224 VTEMNGRI 231
>gi|426387255|ref|XP_004060089.1| PREDICTED: ELAV-like protein 3 isoform 3 [Gorilla gorilla gorilla]
Length = 346
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 141/335 (42%), Gaps = 62/335 (18%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 23 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 77
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 78 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 137
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 138 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 197
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFSDNHSAYKRSHPQSSVGRNR----DG-- 218
+ Q +H AR GP+ H +R P S + R DG
Sbjct: 198 PSQKTGQALLTHLYQSSARRYAGPL----------HHQTQRFRPLSLIARFSPIAIDGMS 247
Query: 219 ---------PPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYS 261
+ W Y S + DE +L FG + +K + + +
Sbjct: 248 GLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFG 307
Query: 262 FVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
FV + DEA A L G + + + F +S+
Sbjct: 308 FVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 342
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 32/202 (15%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY------SS 55
A P+K +R D EA P++N++VG LS + + L F G + + S
Sbjct: 195 AQAPAKKSRT--DGEAEPTANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKS 252
Query: 56 RSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFA-----------------RPAKPSK 98
+ F FV FK E+A A A+ G + G I+ +FA + + P+
Sbjct: 253 KGFGFVRFKTAEEAAKAV-AMTGHEIDGRAIRCDFAAEKTDNPVERRAQKFNDQRSAPAA 311
Query: 99 HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKN 152
L++GG+S ++++ + E F FG+I+ D T +VE++ ++ A AL+
Sbjct: 312 TLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEA 371
Query: 153 INGRQIGGEQLRVDFLRSQPSR 174
+NG+++ G ++RVD+ +P R
Sbjct: 372 MNGKELSGRRIRVDYSGPKPDR 393
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 46/213 (21%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL------KDGNTAFVEYSRLEDAA 147
A+P+ +++VGG+S V E L F G + + + + K FV + E+AA
Sbjct: 208 AEPTANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAA 267
Query: 148 EALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSH 207
+A+ + G +I G +R DF + + D P+ R F+D SA
Sbjct: 268 KAVA-MTGHEIDGRAIRCDF-------------AAEKTDNPVERRAQKFNDQRSA----- 308
Query: 208 PQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPS-------RNY 260
P+ L++G S ++E ++ A FG+I+R+ S P+ + +
Sbjct: 309 ------------PAATLYLGGL-SYDLNEDAVYEAFGDFGDIQRV-SLPTDRETGAPKGF 354
Query: 261 SFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
+VEF VD+A A E + G+ + RI + +S
Sbjct: 355 GYVEFADVDQATAALEAMNGKELSGRRIRVDYS 387
>gi|229442309|gb|AAI72877.1| spen homolog, transcriptional regulator [synthetic construct]
Length = 1113
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR---SFAFVYFKRVEDAKAAKDAL 76
+ L++GNL TT DL+ +F +FG + + +AF+ + + A +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
G N +K+ F + + P+ +W+ G+S VS + L F ++G + F + A
Sbjct: 497 DGEYLGNNRLKLGFGK-SMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMA 555
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V Y+ +E A A+K GR+IGG +++VDF
Sbjct: 556 LVLYNEIEYAQAAVKETKGRKIGGNKIKVDF 586
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 4 PPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRS 57
P S+ + + E S + V NL +TD LK+ LF +F KVT+ S
Sbjct: 318 PTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEER 377
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKI------------EFARPA---------KP 96
+ V+F++ ED + A A +G F G I++ EF RP K
Sbjct: 378 YGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEF-RPLDERIDEFHPKA 436
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNI 153
++ L++G + +T + +L F +FG I D K AF++Y + +A+K +
Sbjct: 437 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 496
Query: 154 NGRQIGGEQLRVDFLRSQPSR-----------REQWPNSHDARDGPII 190
+G +G +L++ F +S P+ +Q+ H R GP++
Sbjct: 497 DGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVV 544
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAE 148
+ ++HLWVG + + V +E++ E F ++G +E K L + G AFV++ ++ A +
Sbjct: 2 VRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDFVDIKSAQK 61
Query: 149 ALKNINGRQIGGEQLRVDF 167
A ++N ++G LR D+
Sbjct: 62 AHNSVN--KMGDRDLRTDY 78
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ LS++ +D L F ++G + KV + A V + +E A+AA +G
Sbjct: 515 PTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKG 574
Query: 79 SDFRGNPIKIEFA 91
GN IK++FA
Sbjct: 575 RKIGGNKIKVDFA 587
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 7 KFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFV 61
K +A+ D++ +NL+V NL + TD + ++F KFG + S+ F FV
Sbjct: 223 KERQAHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFV 282
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKI-----------------EFARPAKPSKH----L 100
FK E A+AA DAL ++ G + + E A+ K SK+ L
Sbjct: 283 NFKDHESAQAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANL 342
Query: 101 WVGGISQTVSKEELEEGFLKFGNIEDFKFLKD--GNT---AFVEYSRLEDAAEALKNING 155
++ + + ++L F FG I K ++D G + FV YS E+A +A+ +N
Sbjct: 343 YIKNLEDDMDDDKLRAEFEPFGTITSCKIMRDEKGTSKGFGFVCYSSPEEATKAVAEMNN 402
Query: 156 RQIGGEQLRVDFLRSQPSRREQWPNSHDARD 186
+ +G + L V + + RR+Q + AR+
Sbjct: 403 KMLGSKPLYVSPAQRREVRRQQLESQIAARN 433
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
PS++L+VG L + T+A L E+F G + + T S +A+V + D + A
Sbjct: 54 PSASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 113
Query: 73 KDALQGSDFRGNPIKIEFAR--PAKPSK---HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L S + +I +++ PA ++++ + + + + L + F FGN+
Sbjct: 114 LEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAFGNVLSC 173
Query: 128 KFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
K D N FV Y E A A+K +NG + +++ V S+ R+
Sbjct: 174 KVATDENGRSRGFGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHYISKKERQ 226
>gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegicus]
gi|34328053|ref|NP_034617.1| ELAV-like protein 3 [Mus musculus]
gi|3913870|sp|Q60900.1|ELAV3_MOUSE RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC
gi|1146120|gb|AAC52999.1| mHuC-L [Mus musculus]
gi|26006109|dbj|BAC41352.1| HuC [Rattus norvegicus]
gi|30354162|gb|AAH52097.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Mus musculus]
gi|148693297|gb|EDL25244.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Mus musculus]
gi|149020436|gb|EDL78241.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Rattus norvegicus]
Length = 367
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 145/338 (42%), Gaps = 55/338 (16%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 31 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 85
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 86 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 146 SQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 205
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAYKRSHPQSSVGRNR----D 217
+ Q +H AR GP+ + F DN + AY P S + R D
Sbjct: 206 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAID 265
Query: 218 G-----------PPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSR 258
G + W Y S + DE +L FG + +K + +
Sbjct: 266 GMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCK 325
Query: 259 NYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G + + + F +S+
Sbjct: 326 GFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 211 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 270
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 271 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 330
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 331 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 390
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 391 KEERQAHLTNQYMQR 405
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 120 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 179
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 180 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 239
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 240 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 299
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 300 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 332
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 333 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 377
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 125/308 (40%), Gaps = 69/308 (22%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSR--------------- 56
P ++L+VG+L D T+A L E F G + D R
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDXXXXXXXRWRRSHHPELLPAPQP 68
Query: 57 ----SFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGIS 106
F RVE ++ A D + +G P++I +++ PS ++++ +
Sbjct: 69 GEEVQFCARKIPRVEPSERALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLD 127
Query: 107 QTVSKEELEEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQ 162
+++ + L + F FGNI K + D N + FV + E A A++ +NG + +
Sbjct: 128 KSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRK 187
Query: 163 LRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK 222
+ V + SR+E R+ + R F++ + + G + D K
Sbjct: 188 VFVGRFK---SRKE--------REAELGARAKEFTNVYI--------KNFGEDMDDERLK 228
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRL 282
L+ + P++ + ++ +S S+ + FV F ++A++A + + G+
Sbjct: 229 DLFGKFGPALSV-------------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKE 275
Query: 283 FNDPRITI 290
N +I +
Sbjct: 276 LNGKQIYV 283
>gi|359067089|ref|XP_002688919.2| PREDICTED: ELAV-like protein 3 [Bos taurus]
Length = 408
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 79 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 133
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 134 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 193
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 194 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKF-AN 252
Query: 171 QPSRR-------EQWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN--- 215
PS++ + + +S GP+ + F DN + AY KR P + G +
Sbjct: 253 NPSQKTGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLA 312
Query: 216 ---RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVE 264
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 313 GVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVT 372
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 373 MTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 404
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFG-KFGALD------KVTTYSSRSFAFVYFKRVED 68
E +++VG+L+AD TD L ELF K+ ++ T SR + FV F D
Sbjct: 139 EVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDND 198
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPA-----------------KPSKHLWVGGISQTVSK 111
A + G+ PI+I A P ++ ++VGG+ VS+
Sbjct: 199 KSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSTNRTVYVGGLDPNVSE 258
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+EL + F K+G++ K FV++ DA EAL+ +NG IG + +R+ + RS
Sbjct: 259 DELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRS- 317
Query: 172 PSRREQWPNSHDARDGPIIG 191
PS ++ +S R+ G
Sbjct: 318 PSHKQSRADSGSRRNNMYYG 337
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRV 66
+D EA ++NL + L + T ++ LF G +D T S + FV + R
Sbjct: 42 NDGEAK-ATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQ 100
Query: 67 EDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGN 123
EDA A +L G + IK+ FARP+ S +L+V G+++T+S+ +LE F FG
Sbjct: 101 EDAYKAVTSLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQ 160
Query: 124 IEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
I + L D T FV + R +A +A++ +NG+ G E + V F S
Sbjct: 161 IITSRILSDNVTGISKGVGFVRFDRKSEAEDAIEKLNGKIPAGCTEPITVKFANS 215
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLW 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPIIG----RG--TGF-------SDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + R +G+ + NH+AY +P S V + R
Sbjct: 372 EERQAYLTNEYMQRTASVRAVPNQRAPPSGYFMAAVPQTQNHAAY---YPPSQVAQLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 131/287 (45%), Gaps = 47/287 (16%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F G + + T S ++A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHA 68
Query: 73 KDALQGSDFRGNPIKIEFAR--PAKPSK---HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ +G P++I +++ P+ + +++V + ++++ + L + FGNI
Sbjct: 69 LHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 128 KFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHD 183
K + D N + FV + E A A++ +NG + ++ F+ SR+E
Sbjct: 129 KVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKV---FVGQFKSRKE------- 178
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 -REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV--------- 220
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ + +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRT 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R + V DG + LW + P
Sbjct: 280 FEQMKQDRITRYQVVN------------LYVKNLDDGIDDERLWKAFSP----------- 316
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 317 ----FGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 91/232 (39%), Gaps = 60/232 (25%)
Query: 93 PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD------GNTAFVEYSRLEDA 146
P+ P+ L+VG + V++ L E F G I + +D N A+V + +DA
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDA 65
Query: 147 AEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS 206
AL +N I G+ LR+ + + PS R++ G G F N
Sbjct: 66 EHALHTMNFDVIKGKPLRIMWSQRDPSLRKR-------------GVGNIFVKNLDK---- 108
Query: 207 HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP----SRNYSF 262
++ + L++ + FG I K S+ Y F
Sbjct: 109 --------------------------SINNKALYDTVSAFGNILSCKVVCDENGSKGYGF 142
Query: 263 VEFRSVDEARRAKEGLQGRLFNDPRITI-MFSS-----SEL-APGKDYPGSY 307
V F + + A RA E + G L ND ++ + F S +EL A K++P Y
Sbjct: 143 VHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVY 194
>gi|195155519|ref|XP_002018651.1| GL25911 [Drosophila persimilis]
gi|194114804|gb|EDW36847.1| GL25911 [Drosophila persimilis]
Length = 5525
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGS 79
L++GNL + T ++L+ F FG + ++ ++AF + + A + G
Sbjct: 715 TLFIGNLEKEITASELRVHFESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGE 774
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + + A V
Sbjct: 775 HLGSNRIKLGFGK-SMPTNCVWIDGVGEKVSESFLQSQFTRFGAVTKVSIDRQRQLALVL 833
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDF 167
Y ++++A A+K++ G + G +L+VDF
Sbjct: 834 YDQVQNAQAAVKDMRGTIMRGRKLQVDF 861
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 614 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 673
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 674 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKEITASELRVH 733
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 734 FESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMPT 791
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ R A V + +V++A+AA ++G
Sbjct: 790 PTNCVWIDGVGEKVSESFLQSQFTRFGAVTKVSIDRQRQLALVLYDQVQNAQAAVKDMRG 849
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 850 TIMRGRKLQVDFA 862
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFG-KFGALD------KVTTYSSRSFAFVYFKRVED 68
E +++VG+L+AD TD L ELF K+ ++ T SR + FV F D
Sbjct: 192 EVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDND 251
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPA-----------------KPSKHLWVGGISQTVSK 111
A + G+ PI+I A P ++ ++VGG+ VS+
Sbjct: 252 KSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSTNRTVYVGGLDPNVSE 311
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+EL + F K+G++ K FV++ DA EAL+ +NG IG + +R+ + RS
Sbjct: 312 DELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRS- 370
Query: 172 PSRREQWPNSHDARDGPIIG 191
PS ++ +S R+ G
Sbjct: 371 PSHKQSRADSGSRRNNMYYG 390
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 127/327 (38%), Gaps = 71/327 (21%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDAL 76
+WVG+L + L FG G + + T S + FV F +A+ AL
Sbjct: 106 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFY---SHGSAEKAL 162
Query: 77 QGSDFRGN-------PIKIEFARPAKPSKH--------LWVGGISQTVSKEELEEGFL-K 120
Q +F G+ P K+ +A + K ++VG ++ V+ E L E F K
Sbjct: 163 Q--NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANK 220
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
+ +++ K + D NT FV + D + A+ +NG +R+
Sbjct: 221 YRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIG-------- 272
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQ 233
P + G G SD S ++ ++VG P+V
Sbjct: 273 ----PATPRRSSGDSGSSTPGHSDGDST------------------NRTVYVGGLDPNVS 310
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
DE L A +G++ +K + FV+F S +A A +GL G + + + +
Sbjct: 311 EDE--LRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWG 368
Query: 294 SSELAPGKDYPGSYSGTKGPRSEMFFG 320
S P + SG++ R+ M++G
Sbjct: 369 RS---PSHKQSRADSGSR--RNNMYYG 390
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFG-KFGALD------KVTTYSSRSFAFVYFKRVED 68
E +++VG+L+AD TD L ELF K+ ++ T SR + FV F D
Sbjct: 192 EVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDND 251
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPA-----------------KPSKHLWVGGISQTVSK 111
A + G+ PI+I A P ++ ++VGG+ VS+
Sbjct: 252 KSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSTNRTVYVGGLDPNVSE 311
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+EL + F K+G++ K FV++ DA EAL+ +NG IG + +R+ + RS
Sbjct: 312 DELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRS- 370
Query: 172 PSRREQWPNSHDARDGPIIG 191
PS ++ +S R+ G
Sbjct: 371 PSHKQSRADSGSRRNNMYYG 390
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 127/327 (38%), Gaps = 71/327 (21%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDAL 76
+WVG+L + L FG G + + T S + FV F +A+ AL
Sbjct: 106 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFY---SHGSAEKAL 162
Query: 77 QGSDFRGN-------PIKIEFARPAKPSKH--------LWVGGISQTVSKEELEEGFL-K 120
Q +F G+ P K+ +A + K ++VG ++ V+ E L E F K
Sbjct: 163 Q--NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANK 220
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
+ +++ K + D NT FV + D + A+ +NG +R+
Sbjct: 221 YRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIG-------- 272
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQ 233
P + G G SD S ++ ++VG P+V
Sbjct: 273 ----PATPRRSSGDSGSSTPGHSDGDST------------------NRTVYVGGLDPNVS 310
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
DE L A +G++ +K + FV+F S +A A +GL G + + + +
Sbjct: 311 EDE--LRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWG 368
Query: 294 SSELAPGKDYPGSYSGTKGPRSEMFFG 320
S P + SG++ R+ M++G
Sbjct: 369 RS---PSHKQSRADSGSR--RNNMYYG 390
>gi|299753873|ref|XP_002911923.1| pumilio/RRM domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298410502|gb|EFI28429.1| pumilio/RRM domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 1304
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 89/224 (39%), Gaps = 49/224 (21%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDA-KAAKDALQ 77
P+ +LW+GNL + T L +F +GA++ + + FV F DA +A +D L
Sbjct: 463 PTRSLWIGNLDSSVTSEQLIHIFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 522
Query: 78 --GSDF---RGNPIKIEFAR-------PAK------------------------------ 95
G + G ++I F + PAK
Sbjct: 523 RLGGNIGMPNGQTVRIGFGKADSAPVAPAKGSNASPGPTSPNTAAKANTAAGANSMDAQL 582
Query: 96 ---PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKN 152
P++ LW+G I T + + F +G IE + L N F+ + RL+DA A K
Sbjct: 583 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 642
Query: 153 INGRQIGGEQ---LRVDFLRSQPSRREQWPNSHDARDGPIIGRG 193
+NGR + G +R+ F + + DA + + G G
Sbjct: 643 LNGRDVLGSDVGAIRIGFAKVPTKNNADGATTEDASNVAVQGVG 686
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + +V+ E+L F +G IE + L + FV + DA A +++
Sbjct: 463 PTRSLWIGNLDSSVTSEQLIHIFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 522
Query: 156 RQIG------GEQLRVDFLR--SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSH 207
R G G+ +R+ F + S P + N+ P + + +
Sbjct: 523 RLGGNIGMPNGQTVRIGFGKADSAPVAPAKGSNASPGPTSP---------NTAAKANTAA 573
Query: 208 PQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRS 267
+S+ P++ LW+G PS +L + +G IE + +N F+ F
Sbjct: 574 GANSMDAQLQSTPTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFINFER 632
Query: 268 VDEARRAKEGLQGR 281
+D+A RA++ L GR
Sbjct: 633 LDDAVRARKALNGR 646
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 583 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 642
Query: 76 LQGSDFRGN---PIKIEFARPAKPSKHLWVGGISQTVSKEELE-EGFLKFG-NIEDFKFL 130
L G D G+ I+I FA+ P+K+ G ++ S ++ G L G I + +
Sbjct: 643 LNGRDVLGSDVGAIRIGFAK--VPTKNNADGATTEDASNVAVQGVGDLSVGATIHALRSI 700
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQ 177
K +T + L A E ++ + G + + S PS EQ
Sbjct: 701 KGASTIPSDQQVLGGAVENYRSNLLLSMIGNGMHGNGYSSSPSVTEQ 747
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 208 PQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRS 267
P++ N+ P++ LW+G S EQ++H +G IE ++ P + FV F
Sbjct: 451 PKTENQNNQAQTPTRSLWIGNLDSSVTSEQLIH-IFAPYGAIESLRLLPEKECGFVNFVD 509
Query: 268 VDEARRAKEGLQGRLF------NDPRITIMFSSSELAPGKDYPGSYSGTKGPRS 315
+A RAKE + RL N + I F ++ AP GS + + GP S
Sbjct: 510 QADAIRAKEDVLNRLGGNIGMPNGQTVRIGFGKADSAPVAPAKGS-NASPGPTS 562
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSKH------LWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS H +++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|194853276|ref|XP_001968134.1| GG24702 [Drosophila erecta]
gi|190660001|gb|EDV57193.1| GG24702 [Drosophila erecta]
Length = 5592
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 668 LFIGNLEKDITAGELRGHFEGFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 727
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG + ++ A V Y
Sbjct: 728 LGSNRIKLGFGK-SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRNRQLALVLY 786
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + +L+VDF
Sbjct: 787 DQVQNAQAAVKDMRGTILRNRKLQVDF 813
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 78/303 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 566 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 625
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 626 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRGH 685
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 686 FEGFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 742
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWV-GYPPSVQM 234
+ +W+ G ++
Sbjct: 743 ---------------------------------------------TNCVWIDGV--GEKV 755
Query: 235 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
E L + FG + ++ +R + V + V A+ A + ++G + + ++ + F+S
Sbjct: 756 SESFLQSQFTRFGTVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRNRKLQVDFAS 815
Query: 295 SEL 297
E
Sbjct: 816 REC 818
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 44/73 (60%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FG + KV+ +R A V + +V++A+AA ++G
Sbjct: 742 PTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 801
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 802 TILRNRKLQVDFA 814
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLW 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPIIG----RG--TGF-------SDNHSAYKRSHPQSSVGRNRDG 218
R+ N + R + R +G+ + NH+AY +P S V + R
Sbjct: 372 EERQAYLTNEYMQRTASVRAVPNQRAPPSGYFMAAVPQTQNHAAY---YPPSQVAQLRPS 428
Query: 219 P 219
P
Sbjct: 429 P 429
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 131/287 (45%), Gaps = 47/287 (16%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F G + + T S ++A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHA 68
Query: 73 KDALQGSDFRGNPIKIEFAR--PAKPSK---HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ +G P++I +++ P+ + +++V + ++++ + L + FGNI
Sbjct: 69 LHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 128 KFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHD 183
K + D N + FV + E A A++ +NG + ++ F+ SR+E
Sbjct: 129 KVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKV---FVGQFKSRKE------- 178
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 -REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPALSV--------- 220
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 111/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ + +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRT 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ D + Y+ + V DG + LW + P
Sbjct: 280 FEQMK----------QDRITRYQVVN--LYVKNLDDGIDDERLWKAFSP----------- 316
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 317 ----FGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 91/232 (39%), Gaps = 60/232 (25%)
Query: 93 PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD------GNTAFVEYSRLEDA 146
P+ P+ L+VG + V++ L E F G I + +D N A+V + +DA
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDA 65
Query: 147 AEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRS 206
AL +N I G+ LR+ + + PS R++ G G F N
Sbjct: 66 EHALHTMNFDVIKGKPLRIMWSQRDPSLRKR-------------GVGNIFVKNLDK---- 108
Query: 207 HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP----SRNYSF 262
++ + L++ + FG I K S+ Y F
Sbjct: 109 --------------------------SINNKALYDTVSAFGNILSCKVVCDENGSKGYGF 142
Query: 263 VEFRSVDEARRAKEGLQGRLFNDPRITI-MFSS-----SEL-APGKDYPGSY 307
V F + + A RA E + G L ND ++ + F S +EL A K++P Y
Sbjct: 143 VHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVY 194
>gi|49355761|ref|NP_001411.2| ELAV-like protein 3 isoform 1 [Homo sapiens]
gi|21264436|sp|Q14576.3|ELAV3_HUMAN RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC; AltName: Full=Paraneoplastic cerebellar
degeneration-associated antigen; AltName:
Full=Paraneoplastic limbic encephalitis antigen 21
gi|119604626|gb|EAW84220.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Homo sapiens]
gi|380783929|gb|AFE63840.1| ELAV-like protein 3 isoform 1 [Macaca mulatta]
Length = 367
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 145/338 (42%), Gaps = 55/338 (16%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 31 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 85
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 86 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 146 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 205
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAYKRSHPQSSVGRNR----D 217
+ Q +H AR GP+ + F DN + AY P S + R D
Sbjct: 206 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAID 265
Query: 218 G-----------PPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSR 258
G + W Y S + DE +L FG + +K + +
Sbjct: 266 GMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCK 325
Query: 259 NYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ FV + DEA A L G + + + F +S+
Sbjct: 326 GFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 227 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 286
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 287 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 346
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 347 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 406
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 407 KEERQAHLTNQYMQR 421
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 136 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 195
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 196 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 255
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 256 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 315
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 316 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 348
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 349 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 393
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 118/284 (41%), Gaps = 43/284 (15%)
Query: 56 RSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTV 109
R F Y +DA+ A D + +G P++I +++ PS ++++ + +++
Sbjct: 88 RDLTFYYSSSRQDAERALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSI 146
Query: 110 SKEELEEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ L + F FGNI K + D N + FV + E A A++ +NG + ++ V
Sbjct: 147 DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 206
Query: 166 DFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILW 225
+ SR+E R+ + R F++ + + G + D K L+
Sbjct: 207 GRFK---SRKE--------REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLF 247
Query: 226 VGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+ P++ + ++ +S S+ + FV F ++A++A + + G+ N
Sbjct: 248 GKFGPALSV-------------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNG 294
Query: 286 PRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+I + + ++ + + K R + G + LD
Sbjct: 295 KQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 338
>gi|296485880|tpg|DAA27995.1| TPA: ELAV-like protein 3-like [Bos taurus]
Length = 407
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 78 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 132
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 133 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 192
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 193 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKF-AN 251
Query: 171 QPSRR-------EQWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN--- 215
PS++ + + +S GP+ + F DN + AY KR P + G +
Sbjct: 252 NPSQKTGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLA 311
Query: 216 ---RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVE 264
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 312 GVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVT 371
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 372 MTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 403
>gi|195386414|ref|XP_002051899.1| GJ24602 [Drosophila virilis]
gi|194148356|gb|EDW64054.1| GJ24602 [Drosophila virilis]
Length = 5779
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T ++L+ F FG + ++ ++AF + + A + G
Sbjct: 639 LFIGNLEKDITASELRVHFESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 698
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N I + F + + P+ +W+ G+ + VS+ L+ F +FG + + A V Y
Sbjct: 699 LGSNRINLGFGK-SMPTNCVWIDGVGEKVSETFLQSQFTRFGTVTKVSIDRTRQLALVLY 757
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + G +L+VDF
Sbjct: 758 DQVQNAQAAVKDMRGTIMRGRKLQVDF 784
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 116/302 (38%), Gaps = 76/302 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 537 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 596
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 597 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYNPKATRTLFIGNLEKDITASELRVH 656
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++ + F +S P+
Sbjct: 657 FESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRINLGFGKSMPTNC 716
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
W I G G S
Sbjct: 717 -VW----------IDGVGEKVS-------------------------------------- 727
Query: 236 EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSS 295
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 728 ETFLQSQFTRFGTVTKVSIDRTRQLALVLYDQVQNAQAAVKDMRGTIMRGRKLQVDFASR 787
Query: 296 EL 297
E
Sbjct: 788 EC 789
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + ++ L+ F +FG + KV+ +R A V + +V++A+AA ++G
Sbjct: 713 PTNCVWIDGVGEKVSETFLQSQFTRFGTVTKVSIDRTRQLALVLYDQVQNAQAAVKDMRG 772
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 773 TIMRGRKLQVDFA 785
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVED 68
++ +P +N++V NLS T+ DLK+LF FG + V +S+ F FV F+ +
Sbjct: 193 ERSSPKFTNVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQSSDS 252
Query: 69 AKAAKDALQGSDFRGNPIKIEFA-RPAKPSK-----------------------HLWVGG 104
A A + L GS N K+ F R K S+ +L++
Sbjct: 253 AATAVEKLNGST--TNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYEKFQGANLYLKN 310
Query: 105 ISQTVSKEELEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIG 159
I +++++E+L+E F +FG I K + D FV ++ E+A++A+ +NG+ IG
Sbjct: 311 IDKSLNEEKLKELFSEFGTITSCKVMSDARGRSKGVGFVAFTTPEEASKAIDEMNGKIIG 370
Query: 160 GEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
+ + V + + R+ Q P I G + HS+ +R PQ
Sbjct: 371 QKPVYVSVAQRKEERKAQLQAHF-----PAIQVSGGNAGYHSSVQRLAPQ 415
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 114/294 (38%), Gaps = 66/294 (22%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+S+L+VG+L + DA L +LF + + V T SS + +V + DA A
Sbjct: 24 NSSLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAM 83
Query: 74 DALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L G PI+I F+ +L++ + ++ + L E F FGN+ K
Sbjct: 84 ENLNYVPLNGKPIRIMFSHRDPLIRKTGFANLFIKNLETSIDNKALHETFSVFGNVLSCK 143
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D N FV++ + A A++ ++GR + +++ V F+R Q ++ N
Sbjct: 144 VAMDSNGHSKGHGFVQFDNDQSAKNAIEKLDGRLMNDKKVYVGYFVRCQERSSPKFTN-- 201
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
Y ++ +S D + L N
Sbjct: 202 -------------------VYVKNLSESYTNE--------------------DLKQLFNT 222
Query: 243 MILFGEIERIKSYP-----SRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIM 291
FG I +K S+ + FV F+S D A A E L G ND ++ +
Sbjct: 223 ---FGVITSVKIMKDENGNSKRFGFVNFQSSDSAATAVEKLNGSTTNDGKVLFV 273
>gi|393245402|gb|EJD52912.1| hypothetical protein AURDEDRAFT_110760 [Auricularia delicata
TFB-10046 SS5]
Length = 1219
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 80/207 (38%), Gaps = 57/207 (27%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD---- 74
PS +LW+GNL + T L +F +GA++ + + FV F DA AKD
Sbjct: 323 PSRSLWIGNLDSSMTSEALIHVFAPYGAIESLRLLPEKECGFVNFVDQNDAIRAKDDVLN 382
Query: 75 ---ALQGSDFRGNPIKIEFAR-------PAK----------------------------- 95
L G G ++I F + PAK
Sbjct: 383 RLGGLIGMP-NGQAVRIGFGKADSAPVAPAKGASNIMSPTSPSSGPGGKTTGVQSPITPG 441
Query: 96 ----------PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLED 145
P++ LW+G I T + + F FG IE + L N FV + RL+D
Sbjct: 442 AGGDSSLQSSPTRALWIGSIPSTTTPATILSVFSPFGPIESARVLTHKNCGFVNFERLDD 501
Query: 146 AAEALKNINGRQIGGEQ---LRVDFLR 169
A A K +NGR + G +R+ F R
Sbjct: 502 AVRARKALNGRDVLGSDVGAIRIGFAR 528
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+ LW+G + +++ E L F +G IE + L + FV + DA A ++
Sbjct: 323 PSRSLWIGNLDSSMTSEALIHVFAPYGAIESLRLLPEKECGFVNFVDQNDAIRAKDDVLN 382
Query: 156 RQIG------GEQLRVDFLR--SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSH 207
R G G+ +R+ F + S P + ++ + P G G + S
Sbjct: 383 RLGGLIGMPNGQAVRIGFGKADSAPVAPAKGASNIMSPTSPSSGPGGKTTGVQSPIT--- 439
Query: 208 PQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRS 267
P + + P++ LW+G PS +L + FG IE + +N FV F
Sbjct: 440 PGAGGDSSLQSSPTRALWIGSIPSTTTPATIL-SVFSPFGPIESARVLTHKNCGFVNFER 498
Query: 268 VDEARRAKEGLQGR 281
+D+A RA++ L GR
Sbjct: 499 LDDAVRARKALNGR 512
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 240 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 299
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 300 KEERQAHLTNQYMQR 314
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 88
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 89 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 148
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 149 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 208
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 209 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 241
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 242 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 286
>gi|340054118|emb|CCC48412.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 773
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 127/337 (37%), Gaps = 95/337 (28%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDAD-LKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKA 71
+D+ P++ +WVGNL D L+E+F +FG + +V +S+ FV+F+ VE+A+
Sbjct: 200 EDEMREPTNTVWVGNLDPYIHTEDYLQEVFREFGRVIRVAKVPDKSYCFVHFRYVEEARI 259
Query: 72 AKDALQGSDFRGNPIKIEF-------------------------ARPAK----------- 95
A + L RG+ + F RP +
Sbjct: 260 AVETLT---VRGSLTGVRFNYGKMFEYGQEDGHVPEDLSGCGTQQRPHRRGREDERYEHD 316
Query: 96 --------------PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
P+ LW+G + ++S EEL E F FG I L N AF+ +
Sbjct: 317 ERRRRPRREEEPMEPTNVLWLGDVPPSISNEELNENFKVFGTINSISRLASKNMAFIHFE 376
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHS 201
+E +AL + + I G +L +++ R+Q
Sbjct: 377 TIESCTQALDLMRDQPIAGVRLSLNYGRAQ------------------------------ 406
Query: 202 AYKRSHPQSS-VGRNRDG-----PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY 255
HPQ+S G DG P+ ++++G S ++E + + F K
Sbjct: 407 ----RHPQTSAAGLTPDGIPLSETPTNVVYIGQLASDVVEED-VEDMFEPFEGFISSKFI 461
Query: 256 PSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
S +F F SV+ AR A+ L I I F
Sbjct: 462 QSSGIAFAHFDSVEHARIARVALNNAHLKGSPIRISF 498
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 95 KPSKHLWVGGISQTVSKEE-LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNI 153
+P+ +WVG + + E+ L+E F +FG + + D + FV + +E+A A++ +
Sbjct: 205 EPTNTVWVGNLDPYIHTEDYLQEVFREFGRVIRVAKVPDKSYCFVHFRYVEEARIAVETL 264
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
R G V F + Q DG + +G ++R
Sbjct: 265 TVR---GSLTGVRFNYGKMFEYGQ-------EDGHVPEDLSGCGTQQRPHRRGREDERYE 314
Query: 214 RN----------RDGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSF 262
+ P+ +LW+G PPS+ +E L+ +FG I I S+N +F
Sbjct: 315 HDERRRRPRREEEPMEPTNVLWLGDVPPSISNEE--LNENFKVFGTINSISRLASKNMAF 372
Query: 263 VEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAP 299
+ F +++ +A + ++ + R+++ + ++ P
Sbjct: 373 IHFETIESCTQALDLMRDQPIAGVRLSLNYGRAQRHP 409
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 146 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 205
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 206 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 265
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 266 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTGMNGRIVATKPLYVALAQR 325
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 326 KEERQAHLTNQYMQR 340
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 111/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 55 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 114
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 115 GMLLNDRKVSVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 174
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 175 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 234
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 235 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 267
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A G+ GR+
Sbjct: 268 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTGMNGRI 312
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 122/289 (42%), Gaps = 41/289 (14%)
Query: 50 VTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGI---- 105
+ T S +A+V F++ DA+ A D + +G P++I +++ P + VG I
Sbjct: 1 MITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPPLRKSGVGNIFIKN 60
Query: 106 -SQTVSKEELEEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGG 160
+++ + L + F FGNI K + D N + FV + E A A++ +NG +
Sbjct: 61 LDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLND 120
Query: 161 EQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPP 220
++ V + SR+E R+ + R F++ + + G + D
Sbjct: 121 RKVSVGRFK---SRKE--------REAELGARAKEFTNVYI--------KNFGEDMDDER 161
Query: 221 SKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQG 280
K L+ + P++ + ++ +S S+ + FV F ++A++A + + G
Sbjct: 162 LKDLFGKFGPALSV-------------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNG 208
Query: 281 RLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+ N +I + + ++ + + K R + G + LD
Sbjct: 209 KELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 257
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 240 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 299
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 300 KEERQAHLTNQYMQR 314
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 88
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 89 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 148
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 149 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 208
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 209 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 241
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 242 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 286
>gi|134026264|gb|AAI36135.1| ELAV (embryonic lethal, abnormal vision)-like 3 (Hu antigen C)
[Xenopus (Silurana) tropicalis]
Length = 342
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 40/320 (12%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 27 NGAADDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSLGYGFV 81
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V + +T++++E+E+ F
Sbjct: 82 NYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLF 141
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 142 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANN 201
Query: 171 QPSRREQWPNSH----DAR--DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
+ Q +H AR GP+ + F S + G + GP +
Sbjct: 202 PSQKTGQALLTHLYQTTARRYTGPLHHQTQRF--RFSPITIDSVTNLAGVSLTGPTTAGW 259
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y S + DE +L FG + +K + + + FV + DEA A
Sbjct: 260 CIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIA 318
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +S+
Sbjct: 319 SLNGYRLGDRVLQVSFKTSK 338
>gi|148237069|ref|NP_001084078.1| ELAV-like protein 1-A [Xenopus laevis]
gi|123909821|sp|Q1JQ73.1|ELV1A_XENLA RecName: Full=ELAV-like protein 1-A; AltName: Full=36 kDa
embryonic-type cytoplasmic polyadenylation
element-binding protein; Short=36 kDa eCPE-binding
protein; Short=36 kDa eCPEB; Short=p36; AltName:
Full=Protein ElrA-A; Short=ElrA
gi|94574290|gb|AAI16460.1| ElrA protein [Xenopus laevis]
Length = 337
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 139/325 (42%), Gaps = 59/325 (18%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRS----------FAFVYF 63
+NL V L + T +L+ LF G + DKV + RS + FV +
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNY 79
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLK 120
+DA+ A + L G + IK+ FARP+ S +L++ G+ +T++++++E+ FL
Sbjct: 80 LNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIKDANLYISGLPRTMTQKDVEDMFLP 139
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF----- 167
FG+I + + L D T AF+ + + +A EA+ + NG + G E + V F
Sbjct: 140 FGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANPN 199
Query: 168 ------LRSQ----PSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRD 217
L SQ P+RR P H A+ G D+ S+ SSV
Sbjct: 200 QNKNVALLSQICHSPARRFGGPVHHQAQRFRFSPMGV---DHMSSI------SSVNVASS 250
Query: 218 GPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEA 271
++V Y DE +L FG + +K + + + FV + +EA
Sbjct: 251 ATSGWCIFV-YNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEA 309
Query: 272 RRAKEGLQGRLFNDPRITIMFSSSE 296
A L G D + + F +S+
Sbjct: 310 AMAIASLNGYRLGDKTLQVSFKTSK 334
>gi|110331931|gb|ABG67071.1| RNA binding motif protein 15B [Bos taurus]
Length = 331
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 32 TTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPI 86
++ +L+ F K+G +++V ++AF+ F+ ++ A AK + G NPI
Sbjct: 1 VSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKVGMSGRVIGRNPI 60
Query: 87 KIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDA 146
KI + + A P+ LWVGG+ S L F +FG+I +K + A+++Y L+ A
Sbjct: 61 KIGYGK-ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAA 119
Query: 147 AEALKNINGRQIGG--EQLRVDFLRSQPSR 174
A + G +GG +LRVDF +++ +R
Sbjct: 120 QAACAKMRGFPLGGPDRRLRVDFAKAEETR 149
Score = 46.2 bits (108), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+A P++ LWVG L +T+ A L F +FG++ + SFA++ ++ ++ A+AA
Sbjct: 66 KANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAK 125
Query: 76 LQGSDFRG--NPIKIEFAR 92
++G G ++++FA+
Sbjct: 126 MRGFPLGGPDRRLRVDFAK 144
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 127 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 186
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 187 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 246
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 247 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 306
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 307 KEERQAHLTNQYMQR 321
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 36 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 95
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 96 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 155
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 156 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 215
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 216 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 248
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 249 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 293
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 132 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 191
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 192 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 251
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 252 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 311
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 312 KEERQAHLTNQYMQR 326
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 41 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 100
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 101 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 160
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 161 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 220
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 221 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 253
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 254 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 298
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 31/190 (16%)
Query: 17 APPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKA 71
P +N++V NL + TD +LK+ FGK+G + +SRSF FV F+ E A
Sbjct: 234 VPRFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFESPEAAAV 293
Query: 72 AKDALQGSDFRGNPI-----------------KIEFARPAKPSK----HLWVGGISQTVS 110
A + + G + + K E R ++ K +L++ + +V+
Sbjct: 294 AVEKMNGISLGEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVN 353
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
E+L+E F ++GN+ K + + FV YS E+A+ AL +NG+ IG + L V
Sbjct: 354 DEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYV 413
Query: 166 DFLRSQPSRR 175
F + + RR
Sbjct: 414 AFAQRKEERR 423
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVEDAKAAK 73
P+S+L+VG+L + L +LF + + V T S +A+V F EDA A
Sbjct: 56 PNSSLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDLTRRSLGYAYVNFANPEDASRAM 115
Query: 74 DALQGSDFRGNPIKIEFARPAKPSKHL------WVGGISQTVSKEELEEGFLKFGNIEDF 127
D+L + R PI+I + PS L ++ + ++ + L E F FG I
Sbjct: 116 DSLNYAPIRDRPIRIMLSN-RDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILSC 174
Query: 128 KFLKDG-----NTAFVEYSRLEDAAEALKNINGRQIGGEQLRV-DFLRSQPSRREQ 177
K D FV++ + E A A+ +NG + +Q+ V F+R Q R +
Sbjct: 175 KVAMDAVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRSRSE 230
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG-----ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+NL+V N++++TTD +ELF KFG +L+K + F FV +++ EDA A +A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L S+ G + + E R K +K+ L+V + +V E+L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
EE F +G I K ++ N FV +S E+A +A+ N + + G+ L V +
Sbjct: 339 EEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 170 SQPSRREQWPNSHDARD 186
+ RR Q AR+
Sbjct: 399 RKDVRRSQLAQQIQARN 415
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
S N+++ NL D + L + F FG + K+ T S+ F FV+F+ AK A D
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 184
Query: 75 ALQGSDFRGNPIKI--EFARPAKPSK---------HLWVGGISQTVSKEELEEGFLKFGN 123
AL G G I + +R + S+ +L+V I+ + E+ +E F KFG
Sbjct: 185 ALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGP 244
Query: 124 IEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I KD + FV Y + EDA +A++ +N ++ GE+L V + + R
Sbjct: 245 IVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVL 304
Query: 179 PNSHDA 184
++A
Sbjct: 305 KKQYEA 310
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFG-KFGALD------KVTTYSSRSFAFVYFKRVED 68
E +++VG+L+AD TD L ELF K+ ++ T SR + FV F D
Sbjct: 153 EVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDND 212
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPA-----------------KPSKHLWVGGISQTVSK 111
A + G+ PI+I A P ++ ++VGG+ VS+
Sbjct: 213 KSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSTNRTVYVGGLDPNVSE 272
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+EL + F K+G++ K FV++ DA EAL+ +NG IG + +R+ + RS
Sbjct: 273 DELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRS- 331
Query: 172 PSRREQWPNSHDARDGPIIG 191
PS ++ +S R+ G
Sbjct: 332 PSHKQSRADSGSRRNNMYYG 351
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 127/327 (38%), Gaps = 71/327 (21%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDAL 76
+WVG+L + L FG G + + T S + FV F +A+ AL
Sbjct: 67 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFY---SHGSAEKAL 123
Query: 77 QGSDFRGN-------PIKIEFARPAKPSKH--------LWVGGISQTVSKEELEEGFL-K 120
Q +F G+ P K+ +A + K ++VG ++ V+ E L E F K
Sbjct: 124 Q--NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANK 181
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
+ +++ K + D NT FV + D + A+ +NG +R+
Sbjct: 182 YRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIG-------- 233
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQ 233
P + G G SD S ++ ++VG P+V
Sbjct: 234 ----PATPRRSSGDSGSSTPGHSDGDST------------------NRTVYVGGLDPNVS 271
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
DE L A +G++ +K + FV+F S +A A +GL G + + + +
Sbjct: 272 EDE--LRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWG 329
Query: 294 SSELAPGKDYPGSYSGTKGPRSEMFFG 320
S P + SG++ R+ M++G
Sbjct: 330 RS---PSHKQSRADSGSR--RNNMYYG 351
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 154 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 213
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 214 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 273
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 274 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 333
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 334 KEERQAHLTNQYMQR 348
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 63 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 122
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 123 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 182
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 183 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 242
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 243 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 275
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 276 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 320
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 34/292 (11%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+++VGN+ TD L+E+F G ++ K+ SF F+ + A A +L G
Sbjct: 76 SVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 135
Query: 80 DFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDG 133
G PIK+ +A + P + +++VG + V+ L F + D + + D
Sbjct: 136 QLYGQPIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQ 195
Query: 134 NTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDG 187
T FV + +DA A+ ++NG+ +G Q+R ++ ++ +
Sbjct: 196 KTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATK---------GANAGEEK 246
Query: 188 PIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK----ILWVG-YPPSVQMDEQMLHNA 242
I+ S+ S + +P N DGP + ++VG P M++ L
Sbjct: 247 QILDTKVDLSNGSSESGKENP------NDDGPENNPQFTTVYVGNLPHEATMNDVHLFFH 300
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 294
+ G IE ++ + + FV + + +EA A + G+L +I + S
Sbjct: 301 SLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKCSWGS 352
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNIN 154
+ ++VG I V+ L+E F G +E K ++ ++ F++Y AA A+ ++N
Sbjct: 74 CRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLN 133
Query: 155 GRQIGGEQLRVDFLRSQPSRRE 176
GRQ+ G+ ++V++ + R +
Sbjct: 134 GRQLYGQPIKVNWAYTSTPRED 155
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 32/183 (17%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL TDADLK LFG+FG + SR F FV F++ E A A +
Sbjct: 119 TNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEK 178
Query: 76 LQGSDF---------------RGNPIKIEF-----ARPAKPSK--HLWVGGISQTVSKEE 113
+ G R +K +F R K K +L+V + +V +
Sbjct: 179 MNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTK 238
Query: 114 LEEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
LEE F +FG I K + N FVE+S E+A++A+ +NG+ +G + + V
Sbjct: 239 LEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLA 298
Query: 169 RSQ 171
+ +
Sbjct: 299 QCK 301
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG-----ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+NL+V N++++TTD +ELF KFG +L+K + F FV +++ EDA A +A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L S+ G + + E R K +K+ L+V + +V E+L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
EE F +G I K ++ N FV +S E+A +A+ N + + G+ L V +
Sbjct: 339 EEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 170 SQPSRREQWPNSHDARD 186
+ RR Q AR+
Sbjct: 399 RKDVRRSQLAQQIQARN 415
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
S N+++ NL D + L + F FG + K+ T S+ F FV+F+ AK A D
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 184
Query: 75 ALQGSDFRGNPIKI--EFARPAKPSK---------HLWVGGISQTVSKEELEEGFLKFGN 123
AL G G I + +R + S+ +L+V I+ + E+ +E F KFG
Sbjct: 185 ALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGP 244
Query: 124 IEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I KD + FV Y + EDA +A++ +N ++ GE+L V + + R
Sbjct: 245 IVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVL 304
Query: 179 PNSHDA 184
++A
Sbjct: 305 KKQYEA 310
>gi|198436064|ref|XP_002132190.1| PREDICTED: similar to predicted protein isoform 2 [Ciona
intestinalis]
Length = 833
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 11 AYDDKEAPPSSN------LWVGNLSADTTDADLKELFGKFGALDKVTTYSSR----SFAF 60
++ DK PP + L+VGNL D ++ D++++F +G +D + + S+ F
Sbjct: 355 SFMDKAIPPEDDPYATRTLFVGNLEPDVSNYDIRKVFEVYGRVDDIDVKRAARGLGSYCF 414
Query: 61 VYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLK 120
V F ++ A AK +L G N +++ + + SK +WVGG+ + +LE F +
Sbjct: 415 VRFSNLDQAYKAKISLNGKAVIKNVVRVGYGKVMLSSK-VWVGGLGSWTTLSDLEREFDR 473
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQI--GGEQLRVDFLRSQP 172
FG I F K ++ + Y ++ A A + G + +LR+DFL +P
Sbjct: 474 FGAIRRIDFRKGDTSSAILYETIDAAQAACNQMRGFLMPNAETRLRMDFLDPEP 527
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 75.9 bits (185), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
++ L+ GNL + A L + ++ + + V TT SR FAFV V+D +
Sbjct: 115 TTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVI 174
Query: 74 DALQGSDFRGNPIKIEFARPAKPSKHLW--------VGGISQTVSKEELEEGFLKFGNIE 125
L GS + G +K+ FA KP + L+ VG +S TV+ E L E F + G +
Sbjct: 175 KNLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVV 234
Query: 126 DFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ L DG T FV YS E+ EAL ++NG ++ G ++RV+
Sbjct: 235 GARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNL 282
>gi|348525751|ref|XP_003450385.1| PREDICTED: ELAV-like protein 2-like [Oreochromis niloticus]
Length = 440
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 46/320 (14%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 119 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYVDPKDAEKAI 177
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 178 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 237
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--------------- 167
D T F+ + R +A EA+K +N ++ G E + V F
Sbjct: 238 VDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALLSQ 297
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R ++ G S S G N G
Sbjct: 298 LYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMAIDGVTSLAGINIPGHAGTGW 357
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 358 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIA 416
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 417 SLNGYRLGDRVLQVSFKTNK 436
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG-----ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+NL+V N++++TTD +ELF KFG +L+K + F FV +++ EDA A +A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L S+ G + + E R K +K+ L+V + +V E+L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
EE F +G I K ++ N FV +S E+A +A+ N + + G+ L V +
Sbjct: 339 EEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 170 SQPSRREQWPNSHDARD 186
+ RR Q AR+
Sbjct: 399 RKDVRRSQLAQQIQARN 415
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
S N+++ NL D + L + F FG + K+ T S+ F FV+F+ AK A D
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 184
Query: 75 ALQGSDFRGNPIKI--EFARPAKPSK---------HLWVGGISQTVSKEELEEGFLKFGN 123
AL G G I + +R + S+ +L+V I+ + E+ +E F KFG
Sbjct: 185 ALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGP 244
Query: 124 IEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I KD + FV Y + EDA +A++ +N ++ GE+L V + + R
Sbjct: 245 IVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVL 304
Query: 179 PNSHDA 184
++A
Sbjct: 305 KKQYEA 310
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVE 67
D A ++ L+ GNL + A L ++ F L T SR FAFV VE
Sbjct: 78 DPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVE 137
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKH---------LWVGGISQTVSKEELEEGF 118
D D L G+++ G +K+ FA KP+K L+VG +S TV+ E L F
Sbjct: 138 DCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAF 197
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ G++ + + DG+T FV YS + AL++++G ++ G +RV+
Sbjct: 198 RECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNL 252
>gi|395512536|ref|XP_003775304.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Sarcophilus
harrisii]
Length = 287
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 29/179 (16%)
Query: 3 PPPSKF--------NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL------- 47
PPP+ N A DD + +NL V L + T + K LFG G +
Sbjct: 19 PPPTALPNGPLVSTNGATDDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVR 74
Query: 48 DKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGG 104
DK+T S + FV + DA A + L G + IK+ +ARP+ S +L+V G
Sbjct: 75 DKITG-QSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSG 133
Query: 105 ISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQ 157
+ +T+S++E+E+ F ++G I + L D T F+ + + +A EA+K +NG++
Sbjct: 134 LPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK 192
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 37/272 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL T+ L LFG+ G + + +AF+ F A A A+
Sbjct: 10 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAATALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P K H++VG +S + L E F FG I + + ++
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + DA A++ +NG+ +G +R ++ +P +
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK---------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRS-HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
G ++ + KR+ P N+ P + ++ G S + E+++ N
Sbjct: 180 ---------GVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFS 230
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKE 276
FG+I+ I+ + + Y+F+ F + + A A E
Sbjct: 231 QFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIE 262
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 36/180 (20%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + DA+AA A
Sbjct: 97 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 156
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----------------------------HLWVGGIS 106
+ G I+ ++ P+K ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFT 216
Query: 107 QTVSKEEL-EEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ EEL + F +FG I+D + +D AF+ ++ E AA A++ + +I G ++
Sbjct: 217 SNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKC 276
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
++ L+ GNL + A L + + V TT SR FAFV +ED +
Sbjct: 249 ATKLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVI 308
Query: 74 DALQGSDFRGNPIKIEFARPAKP-------SKH-LWVGGISQTVSKEELEEGFLKFGNIE 125
L G+ + G +++ A KP ++H L+VG +S TV+ E L + F + GN+
Sbjct: 309 KNLDGTLYSGRTMRVNMADRPKPKAPLYPETEHKLFVGNLSWTVTPEMLTDAFQRCGNVV 368
Query: 126 DFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ L DG T FV YS E+ +A++ +NG +I G ++RV+
Sbjct: 369 GARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNL 416
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V + S+ F FV F++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S ++A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L +D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + + A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 38/287 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL + ++ L LF + GA+ + +AFV F + A A A+
Sbjct: 10 LYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F +K+ +A P K H++VG +S + + L+E F FG I + + ++
Sbjct: 70 SFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + +A A+ +NG+ +G +R ++ +P H
Sbjct: 130 DPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNN 189
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
P Y+ + QSS P + ++ G + DE +++
Sbjct: 190 SKP-------------NYEEVYNQSS-------PTNCTVYCGGFTNGITDE-LINKTFSP 228
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
FG I+ I+ + + Y+F++F + + A A E N + +
Sbjct: 229 FGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFW 275
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 33/177 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + LKE F FG + T S+ +AFV F + +A+AA A
Sbjct: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAA 156
Query: 76 LQGSDFRGNPIKIEFARP---------------AKPSKH------------LWVGGISQT 108
+ G I+ ++ +KP+ ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNG 216
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ E + + F FG I+D + KD AF++++ E A A+++ + +I G ++
Sbjct: 217 ITDELINKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKC 273
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG-----ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+NL+V N++++TTD +ELF KFG +L+K + F FV +++ EDA A +A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L S+ G + + E R K +K+ L+V + +V E+L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
EE F +G I K ++ N FV +S E+A +A+ N + + G+ L V +
Sbjct: 339 EEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 170 SQPSRREQWPNSHDARD 186
+ RR Q AR+
Sbjct: 399 RKDVRRSQLAQQIQARN 415
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
S N+++ NL D + L + F FG + K+ T S+ F FV+F+ AK A D
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 184
Query: 75 ALQGSDFRGNPIKI--EFARPAKPSK---------HLWVGGISQTVSKEELEEGFLKFGN 123
AL G G I + +R + S+ +L+V I+ + E+ +E F KFG
Sbjct: 185 ALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGP 244
Query: 124 IEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I KD + FV Y + EDA +A++ +N ++ GE+L V + + R
Sbjct: 245 IVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVL 304
Query: 179 PNSHDA 184
++A
Sbjct: 305 KKQYEA 310
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG-----ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+NL+V N++++TTD +ELF KFG +L+K + F FV +++ EDA A +A
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 278
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L S+ G + + E R K +K+ L+V + +V E+L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
EE F +G I K ++ N FV +S E+A +A+ N + + G+ L V +
Sbjct: 339 EEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 170 SQPSRREQWPNSHDARD 186
+ RR Q AR+
Sbjct: 399 RKDVRRSQLAQQIQARN 415
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
S N+++ NL D + L + F FG + K+ T S+ F FV+F+ AK A D
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 184
Query: 75 ALQGSDFRGNPIKI--EFARPAKPSK---------HLWVGGISQTVSKEELEEGFLKFGN 123
AL G G I + +R + S+ +L+V I+ + E+ +E F KFG
Sbjct: 185 ALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGP 244
Query: 124 IEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I KD + FV Y + EDA +A++ +N ++ GE+L V + + R
Sbjct: 245 IVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVL 304
Query: 179 PNSHDA 184
++A
Sbjct: 305 KKQYEA 310
>gi|45360753|ref|NP_989050.1| RNA binding motif protein 14 [Xenopus (Silurana) tropicalis]
gi|38174074|gb|AAH61344.1| RNA binding motif protein 14 [Xenopus (Silurana) tropicalis]
gi|89269922|emb|CAJ81697.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 468
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
++VGN+ TT ++ ELF ++G + V + +AFV+ + E+A A + L G +
Sbjct: 10 IFVGNVDDSTTQEEITELFERYGTV--VNCAVMKQYAFVHMRGSEEATKAVEDLNGRELN 67
Query: 83 GNPIKIEFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
G + +E ++P +P ++VG +S + E+ + F + G + + +KD AFV
Sbjct: 68 GKKMLVELSKP-RPQNTWKIFVGNVSSSCEVSEIRKMFEEHGRVVECDIVKD--YAFVHM 124
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
+R ++ A++ +NG+++ G+++ V+
Sbjct: 125 TRESESRAAIEALNGKEVKGKRINVEM 151
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
++VG + + ++EE+ E F ++G + + +K AFV E+A +A++++NGR++
Sbjct: 10 IFVGNVDDSTTQEEITELFERYGTVVNCAVMK--QYAFVHMRGSEEATKAVEDLNGRELN 67
Query: 160 GEQLRVDFLRSQP 172
G+++ V+ + +P
Sbjct: 68 GKKMLVELSKPRP 80
>gi|355745275|gb|EHH49900.1| hypothetical protein EGM_00635 [Macaca fascicularis]
Length = 289
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYS 54
P P + DD + +NL V L + T + + LFG G + DK+T
Sbjct: 48 CPSPMQTGATTDDSK----TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG-Q 102
Query: 55 SRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSK 111
S + FV + +DA+ A + L G + IK+ +ARP+ S +L+V G+ +T+++
Sbjct: 103 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 162
Query: 112 EELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQL 163
+ELE+ F ++G I + L D T F+ + + +A EA+K +NG++ G E +
Sbjct: 163 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPI 222
Query: 164 RVDF---------------LRSQPSRREQWPNSHDAR 185
V F L P+RR P H A+
Sbjct: 223 TVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQ 259
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V T SR F FV +++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANKAVED 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G++ G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F + DA+ A
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVVKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N AFV + + A A++ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ +AFV+F+ + A A + +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + E L+E F K+G
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLS 219
Query: 127 FKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D G + FV Y + EDA +A++++NG ++ G+ + V + + R+ +
Sbjct: 220 VKVMMDPTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + L++ +D++ L
Sbjct: 280 FEMLKQERISRYQGVN--------------------------LYIKNLDDT-IDDEKLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 30/198 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F++ EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 77 QGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEELE 115
G + G I K E + + +++ L+V + + E L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKCKFEQMKQDRITRYQVVNLYVKNLDDAIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDARDGPI 189
R+ N + R +
Sbjct: 372 EERQAYLTNEYMQRKASV 389
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 135/289 (46%), Gaps = 51/289 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKA 71
P+++L+VG+L D T+A L E F + G + D +T +SS ++A+V F+ +DA+
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSS-NYAYVNFQHPKDAEH 67
Query: 72 AKDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIE 125
A D + +G P++I +++ PS +++V + ++++ + L + FGN+
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQ-RDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVL 126
Query: 126 DFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 127 SCKVVCDENGSKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFK---SRKE----- 178
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
R+ + R F + + + G + D K L+ + P++ +
Sbjct: 179 ---REAELGARAKEFPNVYI--------KNFGEDMDDERLKDLFGKFGPTLSV------- 220
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 ------KVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYV 263
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFETREAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GIPLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + + EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKCK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R + +N D +D++ L
Sbjct: 280 FEQMKQDRI-------------TRYQVVNLYVKNLDD--------------AIDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V + S+ F FV F++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S ++A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L +D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + + A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 52/284 (18%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L A+ TD+ L ELF + G V + S +A+V + DA A
Sbjct: 120 PTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARA 179
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+AL + PI++ ++ S+ ++++ + +T+ + L + F FG I
Sbjct: 180 MEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSC 239
Query: 128 KFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D FV+Y + E A A+K++NG I + + V FLR Q E+ +S
Sbjct: 240 KVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQ----ERDNSS 295
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
A+ + F N S V S ++ +G MD +
Sbjct: 296 DKAKFNNV------FVKNLSESTTKEDLIKVFSEYGTITSAVVMIG------MDGK---- 339
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
SR + FV F S D+A RA E L G+ ND
Sbjct: 340 ---------------SRCFGFVNFESPDDAARAVEELNGKKIND 368
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT DL ++F ++G + SR F FV F+ +DA A +
Sbjct: 301 NNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEE 360
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G R +K F + K + ++L++ + ++ ++L
Sbjct: 361 LNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQL 420
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F FG I K ++D N + FV +S E+A++AL +NG+ I G+ L V F +
Sbjct: 421 RELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQ 480
Query: 170 SQPSRR 175
+ R+
Sbjct: 481 RKEERK 486
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 54/206 (26%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEA 149
P+ L+VG + V+ +L E F + G + + +D N+ A+V YS DAA A
Sbjct: 120 PTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARA 179
Query: 150 LKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
++ +N + + +RV + PS R RS
Sbjct: 180 MEALNFAPLNNKPIRVMYSNRDPSSR-----------------------------RSGSA 210
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY-----PSRNYSFVE 264
+ +N D +D + LH+ FG I K S+ + FV+
Sbjct: 211 NIFIKNLDK--------------TIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQ 256
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITI 290
+ + A+ A + L G L ND + +
Sbjct: 257 YEKEESAQSAMKSLNGMLINDKPVYV 282
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
NL++ NL TD L+ELF FG + S+ FV F E+A A +
Sbjct: 405 NLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEM 464
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQ 107
G G P+ + FA+ + K + SQ
Sbjct: 465 NGKMISGKPLYVAFAQRKEERKAMLQAQFSQ 495
>gi|143346991|gb|ABO93208.1| Elav [Platynereis dumerilii]
Length = 361
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 136/317 (42%), Gaps = 43/317 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRS-------FAFVYFKRV 66
+NL V L T +++ LF G + DK T SS + + FV +KR
Sbjct: 42 TNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKATDQSSGTSSCQSLGYGFVNYKRP 101
Query: 67 EDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGN 123
EDA+ A + L G + IK+ +ARP+ S +L++ G+ +++S+ EL F G+
Sbjct: 102 EDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYLSGLPKSMSEPELRSLFSSCGS 161
Query: 124 IEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRR 175
I + + L D T F+ + + +A A+K +NG+ G E + V F + S +
Sbjct: 162 IINCRILCDNTTGLSKGVGFIRFDQRVEAERAIKQLNGKVPEGATEPITVKFANAPSSNK 221
Query: 176 EQWPNSHDARD--------GPI---IGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKIL 224
Q P + A GPI GR + S P + + N +
Sbjct: 222 NQLPITAMATYLSPTRRFLGPIHHPAGRFSSASRFSPLDGGLMPNTLLSGNALNGAGWCI 281
Query: 225 WVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGL 278
+V Y + + +E +L FG ++ +K + + + FV + DEA A + L
Sbjct: 282 FV-YNLAPETEENVLWQLFGPFGAVQSVKVIRDFQTQKCKGFGFVTMTNYDEALMAIQSL 340
Query: 279 QGRLFNDPRITIMFSSS 295
G + + + F ++
Sbjct: 341 NGYTLGNRVLQVSFKTN 357
>gi|315046346|ref|XP_003172548.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
gi|311342934|gb|EFR02137.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
Length = 304
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 23/178 (12%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG-ALDKVTTYS----SRSFAFVYFKRVEDAKAAK 73
P + ++VGN+ D T ADLKE K+G L Y SR F +V F+ VE+AK A
Sbjct: 92 PKATIYVGNILFDITAADLKEFASKYGKVLGTRIIYDTRGLSRGFGYVRFQSVEEAKKAI 151
Query: 74 DALQGSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLKFGN 123
D + S++ G + + FA + +P++ ++VG I+ +++ +L F N
Sbjct: 152 DEMHLSEYEGRKLSVNFAQIELREEQPQKQMEPTRTIFVGNIAHQITERDLHAIFDDIPN 211
Query: 124 IEDFKFLKDGNT----AFV--EYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
+ D + D T FV E++ +E A + + G+ G LR+D+ S +RR
Sbjct: 212 VFDVRVAVDRRTGMPRGFVHAEFTDVESAIAGFEILKGQAPYGRPLRLDY--SHSARR 267
>gi|344228406|gb|EGV60292.1| hypothetical protein CANTEDRAFT_136776 [Candida tenuis ATCC 10573]
Length = 647
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 31/197 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG-----ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ + TD +LKELF +G L+K S+ F FV F DA A D
Sbjct: 232 TNVFVKNLAPEYTDQELKELFSAYGPITSSYLEKDLEGKSKGFGFVNFDNHNDAVKAVDE 291
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L + G PI + E + K SK+ L++ + T+ E+L
Sbjct: 292 LNNKEIAGQPIYVGRAQKKRERMEELRRQYEATKLEKLSKYQGVNLFIKNLDDTIDSEKL 351
Query: 115 EEGFLKFGNIEDFKFL-----KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F FGNI + + K FV +S E+A +A+ +N R + G+ L V +
Sbjct: 352 ENEFKPFGNITSARVMVDEQGKSKGFGFVCFSSPEEATKAITEMNQRMVEGKPLYVALAQ 411
Query: 170 SQPSRREQWPNSHDARD 186
+ RR Q AR+
Sbjct: 412 RKDVRRSQLEQQIQARN 428
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
S++L+VG L+ +A L E+F G + + T S +A+V F + +D + A
Sbjct: 50 SASLYVGELNTSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFVKFDDGEQAI 109
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L S G P +I +++ PS ++++ + + + L + F FG I
Sbjct: 110 EDLNYSLIEGRPCRIMWSQ-RDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFGRILSC 168
Query: 128 KFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K D GN+ FV Y E A A++N+NG + ++ V S+ R ++
Sbjct: 169 KVATDELGNSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKKDRESKF 224
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT DL ++FG +G + SR F F+ FK +DA A +
Sbjct: 218 NNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEE 277
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G R +K F + K + +L++ + ++ ++L
Sbjct: 278 LNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQL 337
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +G I K ++D N + FV +S E+A++AL +NG+ I G+ L V F +
Sbjct: 338 CELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQ 397
Query: 170 SQPSRR 175
+ R+
Sbjct: 398 RKEDRK 403
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 117/281 (41%), Gaps = 52/281 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+L+VG+L A TD+ L ELF + G +++ S +A+V F DA A +
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
L + G PI++ ++ S+ ++++ + + + + L + F FGNI K
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 131 KD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHDA 184
D FV+Y + E A A+K++NG I + + V FLR Q RE NS D
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQ--ERE---NSVDK 214
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
+ F N S + S ++ VG MD +
Sbjct: 215 TKFNNV-----FVKNLSESTTKEDLVKIFGAYGNITSAVIMVG------MDGK------- 256
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
SR + F+ F+S D+A RA E L G+ ND
Sbjct: 257 ------------SRCFGFINFKSPDDAARAVEELNGKKIND 285
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 27/190 (14%)
Query: 7 KFNRAYD-DKEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFA 59
K N +Y +E S ++VG L + D L + F KFG L T S+ +
Sbjct: 114 KVNWSYTAQQENQGSYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYG 173
Query: 60 FVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKH-------------------- 99
FV F R EDA+ A + G G IK+ + SK
Sbjct: 174 FVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEINNETSIQNCT 233
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
+++G I + V ++L++ ++G+IE+ + KD AF+++S+ E A A+ NG+ I
Sbjct: 234 VYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIIN 293
Query: 160 GEQLRVDFLR 169
G LR + R
Sbjct: 294 GSTLRCSWGR 303
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 40/238 (16%)
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKP----SKHLWVGGISQTVSKEE 113
+ FV F A+ AKD + G G +K+ ++ A+ S ++VGG+ V+ +
Sbjct: 85 YGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWSYTAQQENQGSYKIFVGGLQPEVNDDL 144
Query: 114 LEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
L + F KFG + D + LK T FV + R EDA A++ +NG ++ G ++V++
Sbjct: 145 LYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNW 204
Query: 168 LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
+ S + + + P KRS+ + + N + +++G
Sbjct: 205 VTSNIASKTEQP------------------------KRSYDEIN---NETSIQNCTVYIG 237
Query: 228 -YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFN 284
P +V+ D+ L + +G IE ++ + Y+F++F + A A G++ N
Sbjct: 238 NIPKNVESDD--LKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIIN 293
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERVSEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|71896483|ref|NP_001025497.1| ELAV-like protein 3 [Xenopus (Silurana) tropicalis]
gi|123913100|sp|Q28FX0.1|ELAV3_XENTR RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|89266725|emb|CAJ83874.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Xenopus (Silurana) tropicalis]
Length = 343
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 141/321 (43%), Gaps = 41/321 (12%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 27 NGAADDSK----TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSLGYGFV 81
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V + +T++++E+E+ F
Sbjct: 82 NYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLF 141
Query: 119 LKFGNIEDFKFLKDGNT-------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLR 169
++G I + L D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 142 SQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFAN 201
Query: 170 SQPSRREQWPNSH----DAR--DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK- 222
+ + Q +H AR GP+ + F S + G + GP +
Sbjct: 202 NPSQKTGQALLTHLYQTTARRYTGPLHHQTQRF--RFSPITIDSVTNLAGVSLTGPTTAG 259
Query: 223 -ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAK 275
++V Y S + DE +L FG + +K + + + FV + DEA A
Sbjct: 260 WCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAI 318
Query: 276 EGLQGRLFNDPRITIMFSSSE 296
L G D + + F +S+
Sbjct: 319 ASLNGYRLGDRVLQVSFKTSK 339
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGK+G V T S+ F FV F++ E+A A +
Sbjct: 191 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEEANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + + E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N AFV + + A A++ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
>gi|226372036|gb|ACO51643.1| RNA-binding protein 4B [Rana catesbeiana]
Length = 328
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
L+VGNL T +LK LF +FG + + + ++AFV+ + + A A + L
Sbjct: 3 KLFVGNLPPAATQTELKSLFEQFGKVSECDIIT--NYAFVHMEDKKSADEAVNNLNQCKL 60
Query: 82 RGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
G I +E +R KP S L V +S + +EL E F ++G + + +KD AFV
Sbjct: 61 HGVSINVEHSR-GKPRASTKLHVSSLSTDCTGDELREKFEEYGGVLECDIVKD--YAFVH 117
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ 177
+ E+A EA++N+N + G+++ V LR P EQ
Sbjct: 118 MEKAEEALEAIRNLNNLEFKGKKMHVQLSTSRLRVTPGMGEQ 159
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 23 LWVGNLSADTTDADLKELFG---KFGALDKV----TTYSSRSFAFVYFKRVEDAKAAKDA 75
++VG+L AD D L F K A KV T S+ F FV F + K + +
Sbjct: 97 IFVGDLRADVDDNILLTTFQSRYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEE 156
Query: 76 LQGSDFRGNPIKIEFARPA------------KPSKHLWVGGISQTVSKEELEEGFLKFGN 123
+QG+ + I++ ARP + ++VGG++ T+++EEL F FGN
Sbjct: 157 MQGAYVGSSRIRVSVARPKAKIETGPVVSGPEEITTVFVGGLNNTITEEELRAYFGTFGN 216
Query: 124 IEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
I K + N AF++Y + A +A+ +NG +GG +LR+ F R+Q
Sbjct: 217 IVAVKIIPLKNIAFIQYEKKSSAEQAISELNGSHLGGAKLRLSFGRTQ 264
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
+ ++VG L+ T+ +L+ FG FG + V ++ AF+ +++ A+ A L GS
Sbjct: 191 TTVFVGGLNNTITEEELRAYFGTFGNIVAVKIIPLKNIAFIQYEKKSSAEQAISELNGSH 250
Query: 81 FRGNPIKIEFARP---AKPSKH 99
G +++ F R PS H
Sbjct: 251 LGGAKLRLSFGRTQLNVNPSAH 272
>gi|148224170|ref|NP_001084080.1| ELAV-like protein 3 [Xenopus laevis]
gi|82245647|sp|Q91584.1|ELAV3_XENLA RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|608541|gb|AAA96944.1| ribonucleoprotein [Xenopus laevis]
Length = 348
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 41/314 (13%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T + K LFG G + DK+T S + FV + DA A
Sbjct: 34 TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYVDPNDADKAI 92
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V + +T++++E+E+ F ++G I + L
Sbjct: 93 NTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRIL 152
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQWPNSH 182
D T F+ + + +A EA+K +NG++ G E + V F + + Q +H
Sbjct: 153 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTH 212
Query: 183 ----DAR--DGPIIGRGTGFSDNHSAYKRSHP------QSSVGRNRDGPPSK--ILWVGY 228
AR GP+ + FS S R P + G + GP + ++V Y
Sbjct: 213 LYQTTARRYTGPLHHQTQRFSP-LSILPRFSPITIDSVTNLAGVSLTGPTTAGWCIFV-Y 270
Query: 229 PPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRL 282
S + DE +L FG + +K + + + FV + DEA A L G
Sbjct: 271 NLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYR 330
Query: 283 FNDPRITIMFSSSE 296
D + + F +S+
Sbjct: 331 LGDRVLQVSFKTSK 344
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V T SR F FV +++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANKAVED 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G++ G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F + DA+ A
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVVKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + + A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ +AFV+F+ + A A + +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + E L+E F K+G
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLS 219
Query: 127 FKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D G + FV Y + EDA +A++++NG ++ G+ + V + + R+ +
Sbjct: 220 VKVMMDPTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + L++ +D++ L
Sbjct: 280 FEMLKQERISRYQGVN--------------------------LYIKNLDDT-IDDEKLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT DL ++FG +G + SR F F+ FK +DA A +
Sbjct: 218 NNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEE 277
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G R +K F + K + +L++ + ++ ++L
Sbjct: 278 LNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQL 337
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +G I K ++D N + FV +S E+A++AL +NG+ I G+ L V F +
Sbjct: 338 CELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQ 397
Query: 170 SQPSRR 175
+ R+
Sbjct: 398 RKEDRK 403
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 117/281 (41%), Gaps = 52/281 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+L+VG+L A TD+ L ELF + G +++ S +A+V F DA A +
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
L + G PI++ ++ S+ ++++ + + + + L + F FGNI K
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 131 KD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHDA 184
D FV+Y + E A A+K++NG I + + V FLR Q RE NS D
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQ--ERE---NSVDK 214
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
+ F N S + S ++ VG MD +
Sbjct: 215 TKFNNV-----FVKNLSESTTKEDLVKIFGAYGNITSAVIMVG------MDGK------- 256
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
SR + F+ F+S D+A RA E L G+ ND
Sbjct: 257 ------------SRCFGFINFKSPDDAARAVEELNGKKIND 285
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRV 66
+D EA ++NL + L + T ++ LF G +D T S + FV + R
Sbjct: 11 NDGEAK-ATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQ 69
Query: 67 EDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGN 123
EDA A +L G + IK+ FARP+ S +L+V G+++T+S+ +LE F FG
Sbjct: 70 EDAYKAVTSLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQ 129
Query: 124 IEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
I + L D T FV + R +A +A++ +NG+ G E + V F S
Sbjct: 130 IITSRILSDNVTGISKGVGFVRFDRKSEAEDAIEKLNGKIPAGCTEPITVKFANS 184
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 37/273 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL T+ L LFG+ G + + +AF+ F A A A+
Sbjct: 10 LYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAATALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P K H++VG +S + L E F FG I + + ++
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + DA A++ +NG+ +G +R ++ +P +
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK---------- 179
Query: 186 DGPIIGRGTGFSDNHSAYKRS-HPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
G ++ + KR+ P N+ P + ++ G S + E+++ N
Sbjct: 180 ---------GVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFS 230
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEG 277
FG+I+ I+ + + Y+F+ F + + A A E
Sbjct: 231 QFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEA 263
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 36/180 (20%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L+E F FG + T S+ +AFV F + DA+AA A
Sbjct: 97 HIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 156
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----------------------------HLWVGGIS 106
+ G I+ ++ P+K ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFT 216
Query: 107 QTVSKEEL-EEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ EEL + F +FG I+D + +D AF+ ++ E AA A++ + +I G ++
Sbjct: 217 SNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKC 276
>gi|387018162|gb|AFJ51199.1| RNA-binding protein 14-like [Crotalus adamanteus]
Length = 596
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P ++VGN+ + + A+L++LF + V +AFV+ + A+ A L G
Sbjct: 3 PGVKVFVGNVPEEASQAELRDLFEAAVPGEVVKVVLKEQYAFVHLRNEAAAERAIQKLNG 62
Query: 79 SDFRGNPIKIEFARPAKPSK--HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA 136
+ +EF+RP +P+ ++VG +S T + EL F +FG + + +KD A
Sbjct: 63 HLLHYRRVFLEFSRP-RPTHTVKIFVGNVSATCTSGELRVLFQEFGPVIECDIVKD--YA 119
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
FV + EDA A++++NGR+I G+++ V+
Sbjct: 120 FVHMEKDEDARTAIEHLNGREIKGKRINVEL 150
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
++VGN+SA T +L+ LF +FG + + + +AFV+ ++ EDA+ A + L G + +
Sbjct: 85 IFVGNVSATCTSGELRVLFQEFGPVIECDIV--KDYAFVHMEKDEDARTAIEHLNGREIK 142
Query: 83 GNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKD----GNTAF 137
G I +E + K K G I Q E+ K +E+ + D GN AF
Sbjct: 143 GKRINVELSN--KAHKRGVAGYIGQFGGDEK-----NKIPTLENMQARNDGVRSGNLAF 194
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V + S+ F FV F++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGKSKGFGFVSFEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S ++A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L +D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + + A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V T S+ F FV F++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K L+DG + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGAITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N AFV + + A A++ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V + S+ F FV F++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S ++A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L +D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + + A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V N+ D TD +L +LFGK+G + +S+ F FV F++ +DA+ A D
Sbjct: 209 TNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDDDGTSKGFGFVNFEKHQDAQNAVDD 268
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L DFRG + + E A+ K SK+ L+V + + + L
Sbjct: 269 LHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSKYQGVNLYVKNLDDDMDDDRL 328
Query: 115 EEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFL 168
+ F +G I K ++D T FV ++ EDA A+ +NGR IG + + V
Sbjct: 329 RDEFSVYGVITSAKIMRDEKTNISRGFGFVCFTSPEDATRAVTEMNGRIIGSKPIYVAIA 388
Query: 169 RSQPSRREQW 178
+ + RR Q
Sbjct: 389 QRKEVRRSQL 398
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
S++L+VG L T+A L E+F G + + T S +A+V F R+ DA+ A
Sbjct: 27 SASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMADAERAL 86
Query: 74 DALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L S +G +I +++ PS ++++ + ++ + L + F FGNI
Sbjct: 87 ETLNYSMIKGRSCRIMWSQ-RDPSLRKGNNGNIFIKNLDPSIDHKALHDTFSAFGNILSC 145
Query: 128 KFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K D GN+ FV Y LE A A+K++NG + ++ F+ SR+E+
Sbjct: 146 KIAHDEQGNSKGYGFVHYETLEAAESAIKSVNGMLLNDRKV---FVGHHISRKERESKLG 202
Query: 183 DAR 185
++R
Sbjct: 203 ESR 205
>gi|169646279|ref|NP_001108616.1| RNA binding motif protein 14 [Danio rerio]
gi|194332550|ref|NP_001123764.1| uncharacterized protein LOC100170513 [Xenopus (Silurana)
tropicalis]
gi|63100727|gb|AAH95368.1| Zgc:110682 [Danio rerio]
gi|163915521|gb|AAI57377.1| Zgc:110682 protein [Danio rerio]
gi|189441765|gb|AAI67521.1| LOC100170513 protein [Xenopus (Silurana) tropicalis]
Length = 471
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
L+VGNL +TT DL LF FG + +T R FAFV+ + A +A L G ++
Sbjct: 8 KLFVGNLDLETTQDDLIALFAPFGEVVHITVL--RQFAFVHLQGEGAADSAIRDLNGREY 65
Query: 82 RGNPIKIEFA--RPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT---- 135
RG + +E + RP +K ++VG + + S E+L + F +G + D +K +
Sbjct: 66 RGRSLVVEESKGRPLNSTK-VFVGNLCASCSVEDLYDLFSPYGKVLDCDKVKTKPSSLTG 124
Query: 136 -AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
AFV EDA +A++ ++G G L V+ + Q S
Sbjct: 125 YAFVYMEHKEDAEQAIEGLHGTTFMGRPLAVELSKVQQS 163
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL---DKVTTYSS--RSFAFVYFKRVEDAKAAKD 74
S+ ++VGNL A + DL +LF +G + DKV T S +AFVY + EDA+ A +
Sbjct: 82 STKVFVGNLCASCSVEDLYDLFSPYGKVLDCDKVKTKPSSLTGYAFVYMEHKEDAEQAIE 141
Query: 75 ALQGSDFRGNPIKIEFAR 92
L G+ F G P+ +E ++
Sbjct: 142 GLHGTTFMGRPLAVELSK 159
>gi|403412253|emb|CCL98953.1| predicted protein [Fibroporia radiculosa]
Length = 1287
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 58/223 (26%)
Query: 5 PSKFNRAYDDKEA------PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSF 58
PS NRA K P+ +LW+GNL + T L +F +GA++ + +
Sbjct: 419 PSTQNRATSPKSEGSTQMQTPTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKEC 478
Query: 59 AFVYFKRVEDA-KAAKDALQ--GSDF---RGNPIKIEFAR-------PAK---------- 95
FV F DA +A +D L G D G ++I F + PAK
Sbjct: 479 GFVNFVDQADAIRAKEDVLNRLGGDIGMPNGQTVRIGFGKADSAPVAPAKGTNLNSPSAT 538
Query: 96 --------------------------PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
P++ LW+G I T + + F +G IE +
Sbjct: 539 SPGGTLGKSSSNNAGLAGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARV 598
Query: 130 LKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQ---LRVDFLR 169
L N F+ + RL+DA A K +NGR + G +R+ F +
Sbjct: 599 LTHKNCGFINFERLDDAVRARKALNGRDVLGSDVGAIRIGFAK 641
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + +V+ E+L F +G IE + L + FV + DA A +++
Sbjct: 439 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 498
Query: 156 RQIG------GEQLRVDFLRSQ-----PSRREQWPNSHDARDGPIIGRGTGFSDNHSAYK 204
R G G+ +R+ F ++ P++ + G +G+ S N++
Sbjct: 499 RLGGDIGMPNGQTVRIGFGKADSAPVAPAKGTNLNSPSATSPGGTLGKS---SSNNAGLA 555
Query: 205 RSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVE 264
Q P++ LW+G PS +L + +G IE + +N F+
Sbjct: 556 GMDAQ------LQSTPTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFIN 608
Query: 265 FRSVDEARRAKEGLQGR 281
F +D+A RA++ L GR
Sbjct: 609 FERLDDAVRARKALNGR 625
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 190 IGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEI 249
+ R + + S R+ S G + P++ LW+G S EQ++H +G I
Sbjct: 409 LSRTSSYLAAPSTQNRATSPKSEGSTQMQTPTRSLWIGNLDSSVTSEQLIH-VFAPYGAI 467
Query: 250 ERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
E ++ P + FV F +A RAKE + RL D
Sbjct: 468 ESLRLLPEKECGFVNFVDQADAIRAKEDVLNRLGGD 503
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 237 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 296
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 297 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 356
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 357 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 416
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 417 KEERQAHLTNQYMQR 431
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 146 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 205
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 206 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 265
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 266 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 325
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 326 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 358
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 359 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 403
>gi|383847619|ref|XP_003699450.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Megachile rotundata]
Length = 664
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 22/187 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGA-LDKVTTYSS-------RSFAFVYFKRVEDAK 70
P+ L+VGN+ ++ E FGK A L +V YSS R F F+ ++ + A
Sbjct: 242 PNLRLFVGNIPKSKGKEEILEEFGKLTAGLTEVIIYSSPDDKKKNRGFCFLEYESHKAAS 301
Query: 71 AAKDALQGSDFR--GNPIKIEFARPAK--------PSKHLWVGGISQTVSKEELEEGFLK 120
AK L + G I +++A P + + L+V ++Q S+E+L+E F +
Sbjct: 302 LAKRRLSTGRIKVWGCDIIVDWADPQEEPDEQTMSKVRVLYVKNLTQDCSEEKLKEVFEQ 361
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR--SQPSRREQW 178
+GNIE K +KD AFV + ++A +A+ +NG++IGG + V + S ++E+
Sbjct: 362 YGNIERVKKIKD--YAFVHFEERDNAVKAMNELNGKEIGGSHIEVSLAKPPSDKKKKEEM 419
Query: 179 PNSHDAR 185
+ + R
Sbjct: 420 LRARERR 426
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V T S+ F FV F++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + + E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N AFV + + A A++ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V + SR F F+ +++ EDA A +
Sbjct: 191 TNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRGFGFISYEKHEDANKAVED 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G++ G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F + DA+ A
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVVKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + + A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 136/323 (42%), Gaps = 53/323 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 46 TNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYVDPKDAEKAI 104
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 105 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 164
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQ--IGGEQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ E + V F
Sbjct: 165 VDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQKPPAATEPITVKFANNPSQKTNQAILSQ 224
Query: 168 LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ------SSVGRNRDGPPS 221
L P+RR P + A+ R + KR P S G N G
Sbjct: 225 LYHSPNRRYPAPLAQQAQR----FRLDNLLNMAYGVKRFPPMTIDGMTSLAGINIPGHAG 280
Query: 222 K--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARR 273
++V Y + DE +L FG + +K + + + FV + DEA
Sbjct: 281 TGWCIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAM 339
Query: 274 AKEGLQGRLFNDPRITIMFSSSE 296
A L G D + + F +++
Sbjct: 340 AIASLNGYRLGDRVLQVSFKTNK 362
>gi|402225652|gb|EJU05713.1| hypothetical protein DACRYDRAFT_20114 [Dacryopinax sp. DJM-731 SS1]
Length = 1322
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 49/200 (24%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDA-KAAKDAL- 76
PS +LW+GNL + T L F K+G ++ + + FV F + DA +A +D L
Sbjct: 464 PSRSLWIGNLDSHITGQVLANAFTKYGPIESFRMLAEKECGFVNFVDISDAIRAKEDVLE 523
Query: 77 -QGSDF--RGN--PIKIEFAR--------------------------------------- 92
QG GN P++I F +
Sbjct: 524 TQGGVIPSLGNSQPVRIGFGKIDSAPSTPMGVASPGGMPGIMTPLSAVAPQSAGGMEAQL 583
Query: 93 PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKN 152
+ P++ LW+G I T + + F FG IE + L N FV + RL+DA A K
Sbjct: 584 QSSPTRALWIGSIPSTTTPATILSIFSPFGPIESARVLTHKNCGFVNFERLDDAVCARKA 643
Query: 153 INGRQIGGEQ---LRVDFLR 169
+NGR + G +R+ F R
Sbjct: 644 LNGRDVLGPDVGAIRIGFAR 663
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 8/189 (4%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+ LW+G + ++ + L F K+G IE F+ L + FV + + DA A +++
Sbjct: 464 PSRSLWIGNLDSHITGQVLANAFTKYGPIESFRMLAEKECGFVNFVDISDAIRAKEDVLE 523
Query: 156 RQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPI-IGRGTGFSDNHSAYKRSHPQSSVGR 214
Q G + SQP R + A P+ + G + PQS+ G
Sbjct: 524 TQGG---VIPSLGNSQPV-RIGFGKIDSAPSTPMGVASPGGMPGIMTPLSAVAPQSAGGM 579
Query: 215 NR--DGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
P++ LW+G PS +L + FG IE + +N FV F +D+A
Sbjct: 580 EAQLQSSPTRALWIGSIPSTTTPATIL-SIFSPFGPIESARVLTHKNCGFVNFERLDDAV 638
Query: 273 RAKEGLQGR 281
A++ L GR
Sbjct: 639 CARKALNGR 647
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F FG ++ + ++ FV F+R++DA A+ A
Sbjct: 584 QSSPTRALWIGSIPSTTTPATILSIFSPFGPIESARVLTHKNCGFVNFERLDDAVCARKA 643
Query: 76 LQGSDFRG---NPIKIEFAR 92
L G D G I+I FAR
Sbjct: 644 LNGRDVLGPDVGAIRIGFAR 663
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 140/329 (42%), Gaps = 45/329 (13%)
Query: 11 AYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYF 63
A D ++ +NL V L + T +L+ LF G + DKV +S + FV +
Sbjct: 10 AEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHS-LGYGFVNY 68
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEFARPAK---PSKHLWVGGISQTVSKEELEEGFLK 120
+DA+ A + L G + IK+ +ARP+ +L++ G+ +T++++++E+ F +
Sbjct: 69 VTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSR 128
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF----- 167
FG I + + L D T AF+ + + +A EA+ + NG + G E + V F
Sbjct: 129 FGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPN 188
Query: 168 ----------LRSQPSRREQWPNSHDARDGPIIGRGTGFS--DNHSAYKRSHPQSSVGRN 215
L P+RR P H A+ +GR S S H G N
Sbjct: 189 QNKNVALLSQLYHSPARRFGGPVHHQAQRFRWVGRRHAASGVQRFSPMGVDHMSGLSGVN 248
Query: 216 RDGPPSK--ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRS 267
G S +++ Y DE +L FG + +K + + + FV +
Sbjct: 249 VPGNASSGWCIFI-YNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 307
Query: 268 VDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+EA A L G D + + F +++
Sbjct: 308 YEEAAMAIASLNGYRLGDKILQVSFKTNK 336
>gi|148701115|gb|EDL33062.1| mCG8382, isoform CRA_c [Mus musculus]
Length = 614
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
N+++ N D D LK+LFGKFG V + S+ F FV F++ EDA+ A D +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 77 QGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEELE 115
G + G I + E R + K +L+V + + E L
Sbjct: 252 NGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 116 EGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V + +
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 172 PSRREQWPNSHDAR 185
R+ N + R
Sbjct: 372 EERQAYLTNEYMQR 385
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L D T+A L E F G + + T S ++A+V F+ +DA+ A
Sbjct: 9 PTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS +++V + ++++ + L + FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-HDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N + FV + E A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 106/285 (37%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N++V NL + L + FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + + EDA +A+ +NG+++ G+Q+ V
Sbjct: 220 VKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYV---------------- 263
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
GR + + KR Q R + + D++ L
Sbjct: 264 ---------GRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDI--DDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
A FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 AFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVE 67
D EA ++NL + L + T ++ LF G +D T S + FV + R E
Sbjct: 79 DGEAK-ATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYVRQE 137
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNI 124
DA A +L G + IK+ FARP+ S +L+V G+++T+S+ +LE F FG I
Sbjct: 138 DAYKAVTSLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQI 197
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
+ L D T FV + R +A +A+ +NG+ G E + V F S
Sbjct: 198 ITSRILSDNVTGISKGVGFVRFDRKSEAEDAIDKLNGKIPAGCTEPITVKFANS 251
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS +D +L ++FG+FG S+ F FV F+ +DA A DA
Sbjct: 218 TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDA 277
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R +K +F + K + +L+V + ++V+ ++L
Sbjct: 278 LNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKL 337
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F FG I K ++D + FV +S E+A+ A+ +NG+ I + L V +
Sbjct: 338 REHFAPFGTITSCKVMRDPTGVSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYVALAQ 397
Query: 170 SQPSRR 175
+ R+
Sbjct: 398 RKEDRK 403
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 60/287 (20%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L A TD+ L E F + G + V TT S + +V + +DA A
Sbjct: 38 TTSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRAL 97
Query: 74 DALQGSDFRGNPIKIEFA-RPAKPSK----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L G I++ ++ R K ++++ + +++ + L E F FG I K
Sbjct: 98 NELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCK 157
Query: 129 FLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHD 183
D FV+Y E A A+ +NG + +Q+ V P H
Sbjct: 158 VAVDPSGQSKGYGFVQYDTDEAAQRAIDKLNGMLLNDKQVYV------------GPFVHK 205
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
+ P G F++ Y ++ +S + ++ L+
Sbjct: 206 LQRDP-SGEKVKFTN---VYVKNLSES-----------------------LSDEELNKVF 238
Query: 244 ILFG-----EIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
FG I R S+ + FV F + D+A RA + L G+ F+D
Sbjct: 239 GEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDD 285
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 106/284 (37%), Gaps = 47/284 (16%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
N+++ NL L E F FG + S+ + FV + E A+ A D L
Sbjct: 128 NIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQRAIDKL 187
Query: 77 QGSDFRGNPIKI-----EFARPAKPSK----HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
G + + + R K +++V +S+++S EEL + F +FG
Sbjct: 188 NGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSC 247
Query: 128 KFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
++DG FV + +DAA A+ +NG+ ++W
Sbjct: 248 VIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDD---------------KEW---- 288
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+G+ S+ + K+ QS S + SV D+ H A
Sbjct: 289 ------FVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFA 342
Query: 243 ---MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLF 283
I ++ R + SR FV F + +EA RA + G++
Sbjct: 343 PFGTITSCKVMRDPTGVSRGSGFVAFSTPEEASRAITEMNGKMI 386
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFG-KFGALD------KVTTYSSRSFAFVYFKRVED 68
E +++VG+L+AD TD L ELF K+ ++ T SR + FV F D
Sbjct: 189 EVASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDND 248
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPA-----------------KPSKHLWVGGISQTVSK 111
A + G PI+I A P ++ ++VGG+ VS+
Sbjct: 249 KSHAMSEMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSSNRTVYVGGLDPNVSE 308
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+EL + F K+G++ K FV+++ DA EAL+ +NG IG + +R+ + RS
Sbjct: 309 DELRKAFAKYGDLASVKIPLGKQCGFVQFASRTDAEEALQGLNGSLIGKQAVRLSWGRS- 367
Query: 172 PSRREQWPNSHDARDGPIIG 191
PS ++ +S + R+ G
Sbjct: 368 PSHKQSRGDSGNRRNNMYYG 387
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 127/327 (38%), Gaps = 71/327 (21%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDAL 76
+WVG+L + L FG G + + T S + FV F +A+ AL
Sbjct: 103 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFF---SHASAEKAL 159
Query: 77 QGSDFRGNPI-------KIEFA-------RPAKPSKH-LWVGGISQTVSKEELEEGFL-K 120
Q +F G+ + K+ +A R S H ++VG ++ V+ E L E F K
Sbjct: 160 Q--NFTGHVMPNTDRAFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSK 217
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
+ +++ K + D NT FV + D + A+ +NG +R+
Sbjct: 218 YRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIG-------- 269
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQ 233
P + G G SD S+ ++ ++VG P+V
Sbjct: 270 ----PATPRRSSGDSGSSTPGHSDGDSS------------------NRTVYVGGLDPNVS 307
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
DE L A +G++ +K + FV+F S +A A +GL G L + + +
Sbjct: 308 EDE--LRKAFAKYGDLASVKIPLGKQCGFVQFASRTDAEEALQGLNGSLIGKQAVRLSWG 365
Query: 294 SSELAPGKDYPGSYSGTKGPRSEMFFG 320
S P SG + R+ M++G
Sbjct: 366 RS---PSHKQSRGDSGNR--RNNMYYG 387
>gi|170061963|ref|XP_001866463.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880034|gb|EDS43417.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 341
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 37/310 (11%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L T ++K LF G + DKVT S + FV + R EDA+ A
Sbjct: 27 TNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTAGQSLGYGFVNYHRPEDAEKAI 86
Query: 74 DALQGSDFRGNPIKIEFARP---AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ G + IK+ FARP A +L+V G+S+++++++LE F +G I + L
Sbjct: 87 NTFNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLSKSMTQQDLEALFQPYGQIITSRIL 146
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQ----- 177
D T F+ + + +A A++ +NG G E + V F + + +
Sbjct: 147 CDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTPKGASEPITVKFANNPSNNINKAIPPL 206
Query: 178 ------WPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPS 231
PN GPI G FS +S S + N ++V Y +
Sbjct: 207 AAYLTPTPNLRRFPPGPIHPLGGRFS-RYSPLTGDLGTSVLSANAINGSGWCIFV-YNLA 264
Query: 232 VQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+ +E +L FG ++ +K + + + FV + DEA A + L G +
Sbjct: 265 PETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSLNGYTLGN 324
Query: 286 PRITIMFSSS 295
+ + F ++
Sbjct: 325 RVLQVSFKTN 334
>gi|431093|gb|AAA58677.1| huc [Homo sapiens]
Length = 359
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 49/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T + FV
Sbjct: 31 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-RDLGYGFV 85
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 86 NYPDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 146 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 205
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHP--------QSS 211
+ Q +H AR GP+ + F DN + AY KR P +
Sbjct: 206 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 265
Query: 212 VGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
VG + ++V Y S + DE +L FG + +K + + + FV
Sbjct: 266 VGLSGGAAGGWCIFV-YNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 324
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 325 TNYDEAAMAIASLNGYRLAERVLQVSFKTSK 355
>gi|410907065|ref|XP_003967012.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 2-like, partial
[Takifugu rubripes]
Length = 321
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 134/319 (42%), Gaps = 46/319 (14%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAKD 74
NL V L + +LK LFG G + DK+T S + FV + +DA+ A +
Sbjct: 1 NLIVNYLPQNMXQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYVDPKDAEKAIN 59
Query: 75 ALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 60 TLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILV 119
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF---------------L 168
D T F+ + R +A EA+K +N ++ G E + V F L
Sbjct: 120 DQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTSQALLSQL 179
Query: 169 RSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--I 223
P+RR P + A R ++ G S S G N G
Sbjct: 180 YQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMAIDGVTSLAGINIPGHAGTGWC 239
Query: 224 LWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEG 277
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 240 IFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIAS 298
Query: 278 LQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 299 LNGYRLGDRVLQVSFKTNK 317
>gi|149061998|gb|EDM12421.1| rCG48334, isoform CRA_f [Rattus norvegicus]
Length = 614
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 123/301 (40%), Gaps = 48/301 (15%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++NL+VGNL A L ELF FG +D T S+ + FV + A A
Sbjct: 292 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 351
Query: 74 DALQGSDFRGNPIKIEFA-------RPAKPSKH-----LWVGGISQTVSKEELEEGFLKF 121
+ G G +K+ +PSK L+V +S +++ + L FL F
Sbjct: 352 KRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPF 411
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G + + K KD T FV+YS AAEA+ ++NGR + G ++ V + PS
Sbjct: 412 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVR-VSGIPS-- 468
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
PNS A + P R + S R L+V PS +D
Sbjct: 469 -TLPNS--AVESPSTTRNSAVE-----------SPSTTRTVKEIDMSNLYVCNMPS-SID 513
Query: 236 EQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRIT 289
+ L + FG+I + ++ ++ Y F++F + A +A + G L I
Sbjct: 514 TKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMII 573
Query: 290 I 290
+
Sbjct: 574 V 574
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 108/279 (38%), Gaps = 65/279 (23%)
Query: 37 LKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKP 96
K+ KF TYS+ SFA ++E KA D + K E P+ P
Sbjct: 229 FKKRLVKFADDVSCYTYSTESFAAA---KLEKRKAQFDDQDKHLHK----KQEHTPPSFP 281
Query: 97 ----------SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEY 140
+ +L+VG + +V +L E FL FG I + + D T FV+Y
Sbjct: 282 QDGGKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKY 341
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNH 200
S A+EA+K +NGR + G L+V R +P+S D P
Sbjct: 342 SDPRCASEAIKRMNGRLVEGTALKV--------RVTGFPSSEDNSQQP------------ 381
Query: 201 SAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP---- 256
+++ +K+ S+ M+ L + + FGE+ K
Sbjct: 382 --------------SKETDMAKLYVCNL--SLSMNTDRLIHLFLPFGEVTNAKVAKDHTT 425
Query: 257 --SRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
S+ Y FV++ S A A L GRL + +I + S
Sbjct: 426 GLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVS 464
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 27/179 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
+NL+VG + + T+ +LF FG + + + + + V F A AA D L G
Sbjct: 686 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQ 745
Query: 81 FRGNPIKIEFA-RPAKPS--------------------KHLWVGGISQTVSKEELEEGFL 119
G+ + + A PA+ + +L+V + V+ E L + FL
Sbjct: 746 IGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFL 805
Query: 120 KFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
G I K + + T FV+++ AA AL ++NG + G L V P
Sbjct: 806 PCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 864
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
S L++ NL T + LF FG + KV + ++ V++ A A + G
Sbjct: 597 SRLYITNLPRSMTADKMVNLFAPFGQITKVLM--NLEYSLVWYADAPSATKAVQHMDGYM 654
Query: 81 FRGNPIKIEFARPA---------KPSK-----HLWVGGISQTVSKEELEEGFLKFGNIED 126
G + ++ + KP K +L+VG + ++++++ + F FG +
Sbjct: 655 VEGKRLVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQ 714
Query: 127 FKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ + V + AA A+ +++G QIGG L V
Sbjct: 715 ARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAV 753
>gi|74139976|dbj|BAE31823.1| unnamed protein product [Mus musculus]
Length = 636
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|323305308|gb|EGA59055.1| Pab1p [Saccharomyces cerevisiae FostersB]
gi|323333819|gb|EGA75210.1| Pab1p [Saccharomyces cerevisiae AWRI796]
Length = 466
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG-----ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+NL+V N++++TTD +ELF KFG +L+K + F FV +++ EDA A +A
Sbjct: 108 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEA 167
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L S+ G + + E R K +K+ L+V + +V E+L
Sbjct: 168 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 227
Query: 115 EEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
EE F +G I K ++ N FV +S E+A +A+ N + + G+ L V +
Sbjct: 228 EEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 287
Query: 170 SQPSRREQWPNSHDARD 186
+ RR Q AR+
Sbjct: 288 RKDVRRSQLAQQIQARN 304
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
S N+++ NL D + L + F FG + K+ T S+ F FV+F+ AK A D
Sbjct: 14 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 73
Query: 75 ALQGSDFRGNPIKI--EFARPAKPSK---------HLWVGGISQTVSKEELEEGFLKFGN 123
AL G G I + +R + S+ +L+V I+ + E+ +E F KFG
Sbjct: 74 ALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGP 133
Query: 124 IEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I KD + FV Y + EDA +A++ +N ++ GE+L V + + R
Sbjct: 134 IVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVL 193
Query: 179 PNSHDA 184
++A
Sbjct: 194 KKQYEA 199
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-----RSFAFVYFKRVEDAKAAKDA 75
+NL++ NL +TT +L E+FGKFG + S R F FV ++ E A A DA
Sbjct: 354 TNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASKAVDA 413
Query: 76 LQGSDFRGNPIKIEFA-----RPAKPSK----------------HLWVGGISQTVSKEEL 114
L D++GN + + A R A+ K +L+V + E+L
Sbjct: 414 LHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDEYDDEKL 473
Query: 115 EEGFLKFGNIEDFKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+ F FG I K +KD G + FV +S ++A +A+ +NG+ +G + L V +
Sbjct: 474 QNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSKPLYVSLAQ 533
Query: 170 SQPSRREQW 178
+ R++Q
Sbjct: 534 RKEVRKQQL 542
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 31/183 (16%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG L T+A L E+F G + + T S +A+V + DA+ A
Sbjct: 171 PNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERA 230
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
+ L S + +I +++ PS ++++ + +T+ + L + F FG+I
Sbjct: 231 LEQLNYSLIKNKACRIMWSQ-RDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILS 289
Query: 127 FKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGE-------------QLRVDFL 168
K D + A FV Y E A A+K +NG Q+ + Q ++D +
Sbjct: 290 CKVATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGIHVPRRDRQAKIDEV 349
Query: 169 RSQ 171
RSQ
Sbjct: 350 RSQ 352
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 55/212 (25%)
Query: 91 ARPA-KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRL 143
A PA +P+ L+VG + TV++ L E F G + + +D T A+V Y
Sbjct: 165 ASPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNA 224
Query: 144 EDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAY 203
DA AL+ +N I + R+ + + PS R+ G+G F N
Sbjct: 225 ADAERALEQLNYSLIKNKACRIMWSQRDPSLRK-------------TGQGNIFIKNLDE- 270
Query: 204 KRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY-----PSR 258
+D + LH+ FG+I K S+
Sbjct: 271 -----------------------------TIDNKALHDTFAAFGDILSCKVATDEHGASK 301
Query: 259 NYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
Y FV + + + A A +G+ G ND + +
Sbjct: 302 GYGFVHYVTGESAEAAIKGVNGMQLNDKVVFV 333
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V T S+ F FV F++ EDA A +
Sbjct: 197 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEE 256
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + + E + + S++ L++ + T+ E+L
Sbjct: 257 MNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 316
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 317 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 376
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 377 KEERKAHLTNQYMQR 391
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 21/293 (7%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN++ + T++ L E+F G ++ K+ SF FV + A A L G
Sbjct: 75 VYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGRH 134
Query: 81 FRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
G IK+ +A + + H++VG +S V+ L F + + D + + D
Sbjct: 135 IYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNK 194
Query: 135 TA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGP 188
T FV + ++A A+ + G+ +G Q+R ++ S + ++H+A
Sbjct: 195 TGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNSEEKPETDNHNA---V 251
Query: 189 IIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFG 247
++ G S +SA S S + P ++VG V DE H + G
Sbjct: 252 VLTNG---SSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVG 308
Query: 248 EIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPG 300
IE I+ + + FV + + EA A + G + I + + PG
Sbjct: 309 AIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNKPTPPG 361
>gi|281337375|gb|EFB12959.1| hypothetical protein PANDA_010283 [Ailuropoda melanoleuca]
Length = 369
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 143/346 (41%), Gaps = 66/346 (19%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 28 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 82
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 83 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 142
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDF--- 167
++G I + L D T F+ + + +A EA+K +NG++ G E + V F
Sbjct: 143 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 202
Query: 168 ------------LRSQPSRREQWPNSHDAR--DGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
L +RR P H + + RG+G S +S P S +
Sbjct: 203 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRASGVCRGSGQSPRD---PQSSPLSLIA 259
Query: 214 RNR----DG-----------PPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK--- 253
R DG + W Y S + DE +L FG + +K
Sbjct: 260 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 319
Query: 254 ---SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ + + FV + DEA A L G + + + F +S+
Sbjct: 320 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 365
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 21/294 (7%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+++VGN++ + T++ L E+F G ++ K+ SF FV + A A L G
Sbjct: 49 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 108
Query: 80 DFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDG 133
G IK+ +A + + H++VG +S V+ L F + + D + + D
Sbjct: 109 HIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDN 168
Query: 134 NTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDG 187
T FV + ++A A+ + G+ +G Q+R ++ S + ++H+A
Sbjct: 169 KTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNSEEKPETDNHNA--- 225
Query: 188 PIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILF 246
++ G S +SA S S + P ++VG V DE H +
Sbjct: 226 VVLTNG---SSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGV 282
Query: 247 GEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPG 300
G IE I+ + + FV + + EA A + G + I + + PG
Sbjct: 283 GAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNKPTPPG 336
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKV-----TTYSSRSFAFVYFKRVEDAKAAKDALQ 77
L+VGNL + T+ LK LF G + + S+ + F+ ++ A+ A A+
Sbjct: 49 LYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYETHVGAQRALAAMN 108
Query: 78 GSDFRGNPIKIEFA-RPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
G D P+K+ +A RP K H++VG ++Q ++ +L+ F KFG I + + +
Sbjct: 109 GRDVYKMPLKVNWATRPDGIKKDTSKDHHIFVGDLAQELTTLDLQNEFEKFGKISEARVV 168
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+D T FV + + E A A+ +N + I G ++R ++ S+
Sbjct: 169 RDAQTNRSKGYGFVAFLKKESAEMAITEMNNKSICGREVRTNWATSR 215
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVED 68
K+ +++VG+L+ + T DL+ F KFG + + T S+ + FV F + E
Sbjct: 130 KDTSKDHHIFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYGFVAFLKKES 189
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAK--------PSK----------HLWVGGISQTVS 110
A+ A + G ++ +A K P K ++VGGI++ V
Sbjct: 190 AEMAITEMNNKSICGREVRTNWATSRKLPPPTVIDPHKVAQASSFSNTTVYVGGITKDVH 249
Query: 111 KEE-LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
++ L+ F +FG +E+ + + FV+ + A A+ +NG I G ++ +
Sbjct: 250 TQQVLQASFSRFGVVEEVRTFE--TFGFVKMQTHQAATNAICEMNGASISGCTVKCRW 305
>gi|448521353|ref|XP_003868484.1| Pub1 protein [Candida orthopsilosis Co 90-125]
gi|380352824|emb|CCG25580.1| Pub1 protein [Candida orthopsilosis]
Length = 426
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS-----FAFVYFKRVEDAKAAKDALQ 77
L+VGNL ++ + +LF + + + ++ +AF+ F +DA A L
Sbjct: 61 LYVGNLPKSASEEQISKLFSVSKPIKSIKLLNDKNKLGFNYAFIEFDENQDADMALSTLN 120
Query: 78 GSDFRGNPIKIEFA----------RPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
G IK+ +A P P+ +++VG +S V+ E L++ F KF + ++
Sbjct: 121 GKLLNNCEIKVNWAYQSATIASNSTPEDPTYNVFVGDLSSEVNDEALKKAFNKFDSFKEA 180
Query: 128 KFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ D T+ FV + + EDA AL+ +NG +GG +R ++ + S + NS
Sbjct: 181 HVMWDMQTSRSRGYGFVTFGKQEDAELALQTMNGEWLGGRAIRCNWAAHKQSNNRDYANS 240
Query: 182 HDARD 186
H R+
Sbjct: 241 HGLRN 245
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAA 72
P+ N++VG+LS++ D LK+ F KF + + + T SR + FV F + EDA+ A
Sbjct: 149 PTYNVFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFGKQEDAELA 208
Query: 73 KDALQGSDFRGNPIKIEFA 91
+ G G I+ +A
Sbjct: 209 LQTMNGEWLGGRAIRCNWA 227
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
+++G I+ ++E+ FG I DFKF + AFV+Y E AA A+ + G +
Sbjct: 341 VYLGNIAHVTQQQEMIPLLQNFGFIVDFKFHPEKGCAFVKYDSHERAALAIIQLAGFNLN 400
Query: 160 GEQLRVDFLRSQPSRREQWPNSHDAR 185
G L+ + + +P + + S+ R
Sbjct: 401 GRPLKCGWGKERPPQYQNRATSYQGR 426
>gi|16307494|gb|AAH10294.1| Rbm14 protein [Mus musculus]
Length = 618
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|345787182|ref|XP_542056.3| PREDICTED: ELAV-like protein 3 [Canis lupus familiaris]
Length = 647
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 318 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 372
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 373 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 432
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 433 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 492
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 493 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 552
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 553 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 612
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 613 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 643
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 19/193 (9%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVE 67
D + S++L+VG+L D T+A L E+F G + + T S +A+V + +
Sbjct: 20 DTQVFSSASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQ 79
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKF 121
DA+ A + L + +G+P +I ++ PS +++V + +++ + L + F F
Sbjct: 80 DAQEALENLNYIEIKGHPTRIMWSN-RDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHF 138
Query: 122 GNIEDFKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRR 175
G I K D + A FV Y E A EA++ +NG IGG+++ V FLR Q
Sbjct: 139 GPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDRES 198
Query: 176 EQWPNSHDARDGP 188
E+ + R+ P
Sbjct: 199 EEVFTNLYVRNFP 211
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 8 FNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS---RSFAFVYFK 64
F R D + +NL+V N AD + L++ K+G + + R FAFV +K
Sbjct: 190 FLRKQDRESEEVFTNLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKGRRFAFVNYK 249
Query: 65 RVEDAKAAKDAL-----------------QGSDFRGNPIKIEFARPA------KPSKHLW 101
E AK + L Q R N ++ +F + + +L+
Sbjct: 250 EPEVAKEVVNTLNDLKLEESSEPLLVCPHQDKAKRQNLLRAQFNNSTMAQEDKRVTSNLY 309
Query: 102 VGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGR 156
+ + + E L E F FG I K + D N FV ++ ++A +A+ ++ +
Sbjct: 310 IKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAIAAMHLK 369
Query: 157 QIGGEQLRV 165
+ G+ L V
Sbjct: 370 LVKGKPLYV 378
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 44/283 (15%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
L+VGNLS D T+A + +LF + G + V+ A + Q D
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCK---------MIMDEVKVNWATTPSSQKKDTS 59
Query: 83 GNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------A 136
+ + + R ++ H++VG +S ++ E+++ F FG I D + +KD T
Sbjct: 60 SSTV-VSTQR-SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 117
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGF 196
FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 118 FVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK-------------------- 157
Query: 197 SDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKS 254
S Y+ + Q S N+ P + ++ G S + EQ++ FG+I I+
Sbjct: 158 ----STYESNTKQLSYDEVVNQSSPSNCTVYCGGVTS-GLTEQLMRQTFSPFGQIMEIRV 212
Query: 255 YPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
+P + YSFV F S + A A + G + + L
Sbjct: 213 FPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 255
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 74 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 133
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 134 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLT 193
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + F FG I + + D +FV ++ E AA A+ ++NG I G ++
Sbjct: 194 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 248
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 358 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 417
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 418 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 477
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 478 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 537
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 538 KEERQAHLTNQYMQR 552
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 267 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 326
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 327 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 386
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 387 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 446
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 447 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 479
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 480 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 524
>gi|354475185|ref|XP_003499810.1| PREDICTED: ELAV-like protein 3 [Cricetulus griseus]
Length = 359
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 30 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 84
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 85 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 144
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 145 SQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 204
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 205 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 264
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 265 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 324
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 325 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 355
>gi|2078529|gb|AAC51293.1| Hlark [Homo sapiens]
Length = 366
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 15/164 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA---LQG 78
L++GNL + T+ +++ LF ++G + + +++ FV+ +ED AA+DA L
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVH---IEDKTAAEDAIRNLHH 57
Query: 79 SDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
G I +E ++ +K S L VG IS T + +EL F ++G + + +KD AF
Sbjct: 58 YKLHGVNINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECDIVKD--YAF 115
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ 177
V R EDA EA++ ++ + G+++ V LR+ P +Q
Sbjct: 116 VHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQ 159
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-----RSFAFVYFKRVEDAKAAKDA 75
+NL++ NL + T +L E+F K+G + + R F FV ++ E A A +A
Sbjct: 238 TNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADESGKHRGFGFVNYENHESASKAVEA 297
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSKH----------LWVGGISQTVSKEEL 114
L D++GN + + E R + K+ L++ + E+L
Sbjct: 298 LHDKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTLKYQGVNLYIKNLDDEYDDEKL 357
Query: 115 EEGFLKFGNIEDFKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+ FL FG I K +KD FV +S ++A +A+ +NG+ +G + L V +
Sbjct: 358 QAEFLPFGTITSCKVMKDDKGVSRGFGFVCFSAPDEATKAVAEMNGKMLGSKPLYVSLAQ 417
Query: 170 SQPSRREQW 178
+ R++Q
Sbjct: 418 RKDVRKQQL 426
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG L T+A L E+F G + + T S +A+V + DA+ A
Sbjct: 55 PNTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAERA 114
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
+ L S + +I +++ PS ++++ + +T+ + L + F FG+I
Sbjct: 115 LEQLNYSLIKNKACRIMWSQ-RDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILS 173
Query: 127 FKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K D A FV Y E A A+K +NG Q+ +V F+ RRE+
Sbjct: 174 CKVAMDSTGASKGYGFVHYVTAESAEAAIKGVNGMQLND---KVVFVGIHVPRRERQAKI 230
Query: 182 HDAR 185
+ R
Sbjct: 231 DEVR 234
>gi|357462057|ref|XP_003601310.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355490358|gb|AES71561.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 180
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 18 PPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ 77
PPS +LWVGNLS + + +L F +FG L+KV RS+AF+ F+ EDA A +LQ
Sbjct: 40 PPSRHLWVGNLSHNIVEDELAHPFIRFGPLEKVAFQPGRSYAFINFEVDEDAIDAMRSLQ 99
Query: 78 GSDFRGNPIKIEFARPAK----------PSKHLWVGGISQTVSKEELEEG 117
G GNP++IEFA+ P+ ++++ I +V EG
Sbjct: 100 GFLLAGNPLRIEFAKAVSVAKLILFVNFPADYMYIPQIFSSVRFYSFNEG 149
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
PS+HLWVG +S + ++EL F++FG +E F + AF+ + EDA +A++++ G
Sbjct: 41 PSRHLWVGNLSHNIVEDELAHPFIRFGPLEKVAFQPGRSYAFINFEVDEDAIDAMRSLQG 100
Query: 156 RQIGGEQLRVDFLRS 170
+ G LR++F ++
Sbjct: 101 FLLAGNPLRIEFAKA 115
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 219 PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGL 278
PPS+ LWVG +++++ H I FG +E++ P R+Y+F+ F ++A A L
Sbjct: 40 PPSRHLWVGNLSHNIVEDELAH-PFIRFGPLEKVAFQPGRSYAFINFEVDEDAIDAMRSL 98
Query: 279 QGRLFNDPRITIMF----SSSELAPGKDYPGSY 307
QG L + I F S ++L ++P Y
Sbjct: 99 QGFLLAGNPLRIEFAKAVSVAKLILFVNFPADY 131
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS-----RSFAFVYFKRVEDAKAAKDA 75
+NL++ NL +TT +L E+FGKFG + S R F FV ++ E A A DA
Sbjct: 265 TNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASKAVDA 324
Query: 76 LQGSDFRGNPIKIEFA-----RPAKPSK----------------HLWVGGISQTVSKEEL 114
L D++GN + + A R A+ K +L+V + E+L
Sbjct: 325 LHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDEYDDEKL 384
Query: 115 EEGFLKFGNIEDFKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+ F FG I K +KD G + FV +S ++A +A+ +NG+ +G + L V +
Sbjct: 385 QNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSKPLYVSLAQ 444
Query: 170 SQPSRREQW 178
+ R++Q
Sbjct: 445 RKEVRKQQL 453
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 31/183 (16%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG L T+A L E+F G + + T S +A+V + DA+ A
Sbjct: 82 PNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERA 141
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
+ L S + +I +++ PS ++++ + +T+ + L + F FG+I
Sbjct: 142 LEQLNYSLIKNKACRIMWSQ-RDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILS 200
Query: 127 FKFLKDGNTA-----FVEYSRLEDAAEALKNINGRQIGGE-------------QLRVDFL 168
K D + A FV Y E A A+K +NG Q+ + Q ++D +
Sbjct: 201 CKVATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGIHVPRRDRQAKIDEV 260
Query: 169 RSQ 171
RSQ
Sbjct: 261 RSQ 263
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 55/212 (25%)
Query: 91 ARPA-KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRL 143
A PA +P+ L+VG + TV++ L E F G + + +D T A+V Y
Sbjct: 76 ASPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNA 135
Query: 144 EDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAY 203
DA AL+ +N I + R+ + + PS R+ G+G F N
Sbjct: 136 ADAERALEQLNYSLIKNKACRIMWSQRDPSLRK-------------TGQGNIFIKNLDE- 181
Query: 204 KRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY-----PSR 258
+D + LH+ FG+I K S+
Sbjct: 182 -----------------------------TIDNKALHDTFAAFGDILSCKVATDEHGASK 212
Query: 259 NYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
Y FV + + + A A +G+ G ND + +
Sbjct: 213 GYGFVHYVTGESAEAAIKGVNGMQLNDKVVFV 244
>gi|328876996|gb|EGG25359.1| hypothetical protein DFA_03608 [Dictyostelium fasciculatum]
Length = 1145
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS-----------------FAFVYF 63
+NL V N+ T+ DLK+LF +FG ++ ++R + FV F
Sbjct: 704 TNLIVHNIPKHFTNEDLKDLFEEFGEIESYKVVANRKAPSTLLPQQPPPQANMGYGFVKF 763
Query: 64 KRVEDAKAAKDALQGSDFRGNPIKIEFARP-AKPSKH--LWVGGISQTVSKEELEEGFLK 120
E A AA +++ G IK+ +A P ++ S H L++ + V+KE+L E F K
Sbjct: 764 VHSESAAAAIESMNGHMTDSKTIKVSYATPTSQQSTHANLYINRLEPHVTKEDLAEAFSK 823
Query: 121 FGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQI 158
FG + + + L D NT FV +S DA AL +NG I
Sbjct: 824 FGELVETRILMDLNTNTSRCVGFVHFSNRRDALAALSAMNGANI 867
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKD 74
+NL++ L T DL E F KFG L + + T +SR FV+F DA AA
Sbjct: 801 ANLYINRLEPHVTKEDLAEAFSKFGELVETRILMDLNTNTSRCVGFVHFSNRRDALAALS 860
Query: 75 ALQGSDF--RGNPIKIEFA 91
A+ G++ + PI ++FA
Sbjct: 861 AMNGANISQQSTPIYVKFA 879
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR-------SFAFVYFKRVED 68
EAP ++L+VGNLS T+ L E+F G + V R ++ FV + +
Sbjct: 6 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 65
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKF 121
A+ A L G I++ +A + +K H++VG +S V+ E L + F F
Sbjct: 66 AETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSAF 125
Query: 122 GNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G + D + + D N+ F+ + DA +A+ +NG +G +RV++ +
Sbjct: 126 GTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGA 185
Query: 176 EQWPNSHDARDGPIIGRGTG-----FSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG--Y 228
+ R G + G+ F +Y+ Q+ + ++VG
Sbjct: 186 PPTTTASSPRPGGAVTTGSAPAPINFQGGPLSYESVVQQTPA-------YNSTVYVGNLV 238
Query: 229 PPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
P Q D L ++ G + I+ R ++FV+ + + A A LQG++ + I
Sbjct: 239 PYCTQADLIPLFQSI---GYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPI 295
Query: 289 TIMFSSSELAPGKDYPG 305
+ G PG
Sbjct: 296 KCSWGKDRADGGTAQPG 312
>gi|119594959|gb|EAW74553.1| RNA binding motif protein 14, isoform CRA_b [Homo sapiens]
Length = 618
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++NL+VGNL A L ELF FG +D T S+ + FV + A A
Sbjct: 295 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 354
Query: 74 DALQGSDFRGNPIKIEFA-------RPAKPSKH-----LWVGGISQTVSKEELEEGFLKF 121
+ G G +++ A +PSK L+V +S +++ + L FL F
Sbjct: 355 KRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPF 414
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G + + K KD T FV+YS AAEA+ ++NGR + G ++ V + PS
Sbjct: 415 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVR-VSGIPS-- 471
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
PNS A + P R + S R L+V PS +D
Sbjct: 472 -TLPNS--AVESPSTTRNSAVE-----------SPSTTRTVKEIDMSNLYVCNMPS-SID 516
Query: 236 EQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRIT 289
+ L + FG+I + ++ ++ Y F++F + A +A + G L I
Sbjct: 517 TKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMII 576
Query: 290 I 290
+
Sbjct: 577 V 577
Score = 47.0 bits (110), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 27/179 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
+NL+VG + + T+ +LF FG + + + + + V F A AA D L G
Sbjct: 689 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQ 748
Query: 81 FRGNPIKIEFA-RPAKPS--------------------KHLWVGGISQTVSKEELEEGFL 119
G+ + + A PA+ + +L+V + V+ E L + FL
Sbjct: 749 IGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFL 808
Query: 120 KFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
G I K + + T FV+++ AA AL ++NG + G L V P
Sbjct: 809 PCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 867
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
S L++ NL T + LF FG + KV + ++ V++ A A + G
Sbjct: 600 SRLYITNLPRSMTADKMVNLFAPFGQITKVLM--NLEYSLVWYADAPSATKAVQHMDGYM 657
Query: 81 FRGNPIKIEFARPA---------KPSK-----HLWVGGISQTVSKEELEEGFLKFGNIED 126
G + ++ + KP K +L+VG + ++++++ + F FG +
Sbjct: 658 VEGKRLVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQ 717
Query: 127 FKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ + V + AA A+ +++G QIGG L V
Sbjct: 718 ARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAV 756
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 52/258 (20%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
L+VGNL + T+ + LF + G++ K V F ++ A + Q S
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTK---------VIFDEMKVNWAVEPGQQQS--- 95
Query: 83 GNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------ 136
KI+ R H++VG +S V ++L E F FG++ D K ++D NT
Sbjct: 96 ----KIDTTRHF----HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYG 147
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGF 196
FV Y + E+A A++ +NG+ +G +R ++ +P +E+ P+ +
Sbjct: 148 FVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEK-PSHY-------------- 192
Query: 197 SDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP 256
N +Y + Q+S G N ++VG S+ DE + FG I ++ +
Sbjct: 193 --NEKSYDEIYNQTS-GDNTS------VYVGNIASLTEDE--IRQGFASFGRITEVRIFK 241
Query: 257 SRNYSFVEFRSVDEARRA 274
+ Y+FV+F + D A +A
Sbjct: 242 MQGYAFVKFDNKDAAAKA 259
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 30/177 (16%)
Query: 23 LWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDAL 76
++VG+LS++ + L+E F FG + T S+ + FV + + E+A+ A + +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 77 QGSDFRGNPIKIEFA--RPA---KPSKH------------------LWVGGISQTVSKEE 113
G I+ +A +P KPS + ++VG I+ +++++E
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDE 223
Query: 114 LEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ +GF FG I + + K AFV++ + AA+A+ +N + +GG+ +R + ++
Sbjct: 224 IRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 280
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVE 67
D + +NL V L D TD +L LF G ++ T S +AFV F
Sbjct: 78 DNQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEI 137
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNI 124
DA+ A +L G R +K+ +ARP S +L+V + +T++ +ELE+ F K+GNI
Sbjct: 138 DAQNAIKSLNGVTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNI 197
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNIN 154
L+D T AFV +++ E+A EA+ +N
Sbjct: 198 VQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 233
>gi|409082590|gb|EKM82948.1| hypothetical protein AGABI1DRAFT_104752 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1296
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 50/201 (24%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ- 77
P+ +LW+GNL + T L +F +GA++ + + FV F DA AKD +
Sbjct: 455 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADALRAKDDVLN 514
Query: 78 --GSDFR---GNPIKIEFAR-------PAK------------------------------ 95
G + G ++I F + PAK
Sbjct: 515 RLGGNINMPNGQLVRIGFGKADSAPVAPAKGTPVSPGPTSPNSSGKNASGNGGLNSIDAQ 574
Query: 96 ----PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALK 151
P++ LW+G I T + + F +G IE + L N F+ + RL+DA A K
Sbjct: 575 LQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARK 634
Query: 152 NINGRQIGGEQ---LRVDFLR 169
+NGR + G +R+ F +
Sbjct: 635 ALNGRDVLGSDVGAIRIGFAK 655
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 41/206 (19%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + +V+ E+L F +G IE + L + FV + DA A ++
Sbjct: 455 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADALRAKDDVLN 514
Query: 156 RQIG------GEQLRVDFLRSQPSRREQWPNSHDARDGPII-GRGTGFSDNHSAYKRSHP 208
R G G+ +R+ F + A P+ +GT S ++ P
Sbjct: 515 RLGGNINMPNGQLVRIGFGK--------------ADSAPVAPAKGTPVSPGPTS-----P 555
Query: 209 QSSVGRNRDG-------------PPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY 255
SS G+N G P++ LW+G PS +L + +G IE +
Sbjct: 556 NSS-GKNASGNGGLNSIDAQLQSTPTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVL 613
Query: 256 PSRNYSFVEFRSVDEARRAKEGLQGR 281
+N F+ F +D+A RA++ L GR
Sbjct: 614 THKNCGFINFERLDDAVRARKALNGR 639
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 576 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 635
Query: 76 LQGSDFRGN---PIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFG-NIEDFKFLK 131
L G D G+ I+I FA+ S GG ++ S G L G I + +K
Sbjct: 636 LNGRDVLGSDVGAIRIGFAKVPVKSGQEGAGGPEESSSVVVQGVGDLSVGATIHALRNVK 695
Query: 132 DGNTAFVEYSRLEDAAE 148
+T + L A E
Sbjct: 696 GASTIPADQQVLGGAVE 712
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 220 PSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQ 279
P++ LW+G S EQ++H +G IE ++ P + FV F +A RAK+ +
Sbjct: 455 PTRSLWIGNLDSSVTSEQLIH-VFAPYGAIESLRLLPEKECGFVNFVDQADALRAKDDVL 513
Query: 280 GRL---FNDPR---ITIMFS---SSELAPGKDYPGS 306
RL N P + I F S+ +AP K P S
Sbjct: 514 NRLGGNINMPNGQLVRIGFGKADSAPVAPAKGTPVS 549
>gi|213623456|gb|AAI69769.1| ElrC protein [Xenopus laevis]
Length = 341
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 36/308 (11%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T + K LFG G + DK+T S + FV + DA A
Sbjct: 34 TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYVDPNDADKAI 92
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V + +T++++E+E+ F ++G I + L
Sbjct: 93 NTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRIL 152
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRSQPSRREQWPNSH 182
D T F+ + + +A EA+K +NG++ G E + V F + + Q +H
Sbjct: 153 VDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTH 212
Query: 183 ----DAR--DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK--ILWVGYPPSVQM 234
AR GP+ + F S + G + GP + ++V Y S +
Sbjct: 213 LYQTTARRYTGPLHHQTQRF--RFSPITIDSVTNLAGVSLTGPTTAGWCIFV-YNLSPEA 269
Query: 235 DEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
DE +L FG + +K + + + FV + DEA A L G D +
Sbjct: 270 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 329
Query: 289 TIMFSSSE 296
+ F +S+
Sbjct: 330 QVSFKTSK 337
>gi|444510189|gb|ELV09524.1| RNA-binding protein 4B [Tupaia chinensis]
Length = 357
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 23/195 (11%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA---LQGS 79
L++GNL + T+ +++ LF ++G + + +++ FV+ +ED AA+DA L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVH---IEDKTAAEDAIRNLHHY 58
Query: 80 DFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G I +E ++ +K S L VG IS T + +EL F ++G + + +KD AFV
Sbjct: 59 KLHGVNINVEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD--YAFV 116
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ------WPNSHDARDGP 188
R EDA EA++ ++ + G+++ V LR+ P +Q H +++ P
Sbjct: 117 HMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCGKEGHWSKECP 176
Query: 189 I--IGRGTGFSDNHS 201
+ GR F+D ++
Sbjct: 177 VDRTGRVADFTDQYN 191
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG---ALDKVTTYS--SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG ++ VT S S+ F FV F+R EDA+ A D
Sbjct: 236 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDESGKSKGFGFVSFERHEDARKAVDE 295
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 296 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 355
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 356 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 415
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 416 KEERQAHLTNQYMQR 430
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 145 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 204
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 205 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 264
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 265 VKVVTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 324
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 325 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 357
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 358 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 402
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 111/271 (40%), Gaps = 41/271 (15%)
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGI-----SQTVSKEELEEGFLKFG 122
DA+ A D + +G P++I +++ + VG I +++ + L + F FG
Sbjct: 109 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 168
Query: 123 NIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
NI K + D N + FV + E A A++ +NG + ++ F+ SR+E
Sbjct: 169 NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV---FVGRFKSRKE-- 223
Query: 179 PNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQM 238
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 224 ------REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV---- 265
Query: 239 LHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELA 298
++ +S S+ + FV F ++AR+A + + G+ N +I + + ++
Sbjct: 266 ---------KVVTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVE 316
Query: 299 PGKDYPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+ + K R + G + LD
Sbjct: 317 RQTELKRKFEQMKQDRITRYQGVNLYVKNLD 347
>gi|392595910|gb|EIW85233.1| hypothetical protein CONPUDRAFT_79901 [Coniophora puteana
RWD-64-598 SS2]
Length = 1277
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 51/202 (25%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQ- 77
P+ +LW+GNL + T L +F +GA++ + + FV F DA AKD +
Sbjct: 428 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 487
Query: 78 --GSDF---RGNPIKIEFAR-------PAK------------------------------ 95
G + G ++I F + PAK
Sbjct: 488 RLGGNIGMPNGQTVRIGFGKADSAPVAPAKGSTVNASGATSPSGATTKASSPGIAAGMDA 547
Query: 96 -----PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEAL 150
P++ LW+G I T + + F +G IE + L N F+ + RL+DA A
Sbjct: 548 QLQSSPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRAR 607
Query: 151 KNINGRQIGGEQ---LRVDFLR 169
K +NGR + G +R+ F +
Sbjct: 608 KALNGRDVLGSDVGAIRIGFAK 629
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + V+ E+L F +G IE + L + FV + DA A ++
Sbjct: 428 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 487
Query: 156 RQIG------GEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
R G G+ +R+ F + + P + G + S + + K S P
Sbjct: 488 RLGGNIGMPNGQTVRIGF-----GKADSAPVA--PAKGSTVNASGATSPSGATTKASSPG 540
Query: 210 SSVGRNR--DGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRS 267
+ G + P++ LW+G PS +L + +G IE + +N F+ F
Sbjct: 541 IAAGMDAQLQSSPTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFINFER 599
Query: 268 VDEARRAKEGLQGR 281
+D+A RA++ L GR
Sbjct: 600 LDDAVRARKALNGR 613
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 550 QSSPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 609
Query: 76 LQGSDFRGN---PIKIEFAR 92
L G D G+ I+I FA+
Sbjct: 610 LNGRDVLGSDVGAIRIGFAK 629
>gi|417403347|gb|JAA48481.1| Putative rna-binding protein lark [Desmodus rotundus]
Length = 616
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|195350023|ref|XP_002041541.1| GM16721 [Drosophila sechellia]
gi|194123314|gb|EDW45357.1| GM16721 [Drosophila sechellia]
Length = 2358
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T +L+ F FG + ++ ++AF + + A + G
Sbjct: 657 LFIGNLEKDITAGELRGHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEH 716
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+ + V + L+ F +FG + + A V Y
Sbjct: 717 LGSNRIKLGFGK-SMPTNCVWIDGVGEKVPESFLQSQFTRFGTVTKVSIDRSKQLALVLY 775
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
++++A A+K++ G + G +L+VDF
Sbjct: 776 DQVQNAQAAVKDMRGTILRGRKLQVDF 802
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 555 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 614
Query: 77 QGSDFRGNPIKIE----------FARP---------AKPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 615 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRGH 674
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 675 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMPT 732
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + ++ L+ F +FG + KV+ S+ A V + +V++A+AA ++G
Sbjct: 731 PTNCVWIDGVGEKVPESFLQSQFTRFGTVTKVSIDRSKQLALVLYDQVQNAQAAVKDMRG 790
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 791 TILRGRKLQVDFA 803
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 34/292 (11%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +++VGN+ TD L+E+F G ++ K+ SF F+ + A A
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAI 173
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+L G G PIK+ +A + P + +++VG + V+ L F + D
Sbjct: 174 LSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDA 233
Query: 128 KFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ + D T FV + +DA A+ ++NG+ +G Q+R ++ + E+
Sbjct: 234 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEE---- 289
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK----ILWVG-YPPSVQMDE 236
I+ S+ S + +P N DGP + ++VG P M++
Sbjct: 290 -----KQILDTKVDLSNGSSESGKENP------NDDGPENNPQFTTVYVGNLPHEATMND 338
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
L + G IE ++ + + FV + + +EA A + G+L +I
Sbjct: 339 VHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQI 390
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 21/293 (7%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN++ + T++ L E+F G ++ K+ SF FV + A A L G
Sbjct: 73 VYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGRH 132
Query: 81 FRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
G IK+ +A + + H++VG +S V+ L F + + D + + D
Sbjct: 133 VYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNK 192
Query: 135 TA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGP 188
T FV + ++A A+ + G+ +G Q+R ++ S + ++H+A
Sbjct: 193 TGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNSEEKPETDNHNA---V 249
Query: 189 IIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFG 247
++ G S N+SA S S ++ P ++VG V DE H + G
Sbjct: 250 VLTNG---SSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELHRHFYNLGVG 306
Query: 248 EIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPG 300
IE ++ + + FV + + EA A + G + I + PG
Sbjct: 307 AIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPTPPG 359
>gi|449547615|gb|EMD38583.1| hypothetical protein CERSUDRAFT_113767 [Ceriporiopsis subvermispora
B]
Length = 1280
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + TV+ E+L F +G IE + L + FV + DA A +++
Sbjct: 441 PTRSLWIGNLDSTVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 500
Query: 156 RQIG------GEQLRVDFLRSQ-----PSRREQWPNSHDARDGPIIGRGTGFSDNHSAYK 204
R G G+ +R+ F ++ P++ + G +G+ TG N++ +
Sbjct: 501 RLGGDIGMPNGQTVRIGFGKADSAPVAPAKGTNLNSPVATSPGGAMGKATG---NNAGLQ 557
Query: 205 RSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVE 264
Q P++ LW+G PS +L + +G IE + +N F+
Sbjct: 558 GMDAQ------LQSTPTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFIN 610
Query: 265 FRSVDEARRAKEGLQGR 281
F +D+A RA++ L GR
Sbjct: 611 FERLDDAVRARKALNGR 627
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 52/203 (25%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDA-KAAKDALQ 77
P+ +LW+GNL + T L +F +GA++ + + FV F DA +A +D L
Sbjct: 441 PTRSLWIGNLDSTVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 500
Query: 78 --GSDF---RGNPIKIEFAR-------PAK------------------------------ 95
G D G ++I F + PAK
Sbjct: 501 RLGGDIGMPNGQTVRIGFGKADSAPVAPAKGTNLNSPVATSPGGAMGKATGNNAGLQGMD 560
Query: 96 ------PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEA 149
P++ LW+G I T + + F +G IE + L N F+ + RL+DA A
Sbjct: 561 AQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRA 620
Query: 150 LKNINGRQIGGEQ---LRVDFLR 169
K +NGR + G +R+ F +
Sbjct: 621 RKALNGRDVLGSDVGAIRIGFAK 643
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 564 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 623
Query: 76 LQGSDFRGN---PIKIEFARPAKPSKHLWVGGISQTVSKEELEEGF--LKFG-NIEDFKF 129
L G D G+ I+I FA+ P K+ GG Q + +G L G I +
Sbjct: 624 LNGRDVLGSDVGAIRIGFAK--VPVKNGQEGGAGQDEASGLNVQGVGDLSVGATIHALRH 681
Query: 130 LKDGNTAFVEYSRLEDAAE 148
+K T V+ L A E
Sbjct: 682 VKGAATVPVDQQVLSGAVE 700
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 192 RGTGFSDNHSA--YKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEI 249
RGT + SA + P+S + P++ LW+G S EQ++H +G I
Sbjct: 411 RGTSYLQAPSASQTRAVSPKSENSSTQMQTPTRSLWIGNLDSTVTSEQLIH-VFAPYGAI 469
Query: 250 ERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
E ++ P + FV F +A RAKE + RL D
Sbjct: 470 ESLRLLPEKECGFVNFVDQADAIRAKEDVLNRLGGD 505
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS T + +L+++FG+FG + V SR F FV F+ EDA A +A
Sbjct: 206 TNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEA 265
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G R +K F + A+ + +L++ + ++S ++L
Sbjct: 266 LNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKNLDDSISDDKL 325
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +G I K ++D + FV +S E+A+ AL +NG+ + + L V +
Sbjct: 326 KELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQ 385
Query: 170 SQPSRR 175
+ RR
Sbjct: 386 RKEERR 391
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKD 74
++L+VG+L + TD+ L +LF + G + V T+ S + +V + +DA A +
Sbjct: 27 TSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALE 86
Query: 75 ALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKF 129
L + G PI+I ++ + ++++ + + + + L + F FGNI K
Sbjct: 87 VLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKV 146
Query: 130 LKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQ 171
D + FV+Y E A +A++ +NG + +Q+ V F+R Q
Sbjct: 147 AVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQ 194
>gi|357617562|gb|EHJ70861.1| hypothetical protein KGM_04943 [Danaus plexippus]
Length = 668
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 24/199 (12%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGA-LDKVTTYSS-------RSFAFVYFKRVEDAK 70
P+ L+VGN+ ++ E FGK A L +V YSS R F F+ ++ + A
Sbjct: 296 PNLRLFVGNIPKSKGKEEILEEFGKLTAGLVEVIIYSSPDDKKKNRGFCFLEYESHKAAS 355
Query: 71 AAKDALQGSDFR--GNPIKIEFARPAK--------PSKHLWVGGISQTVSKEELEEGFLK 120
AK L + G I +++A P + K L+V ++Q +++E L+E F +
Sbjct: 356 LAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQEITEEALKEEFER 415
Query: 121 FGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR--SQPSRREQW 178
+GN+E K +KD AFV + + A +A++ I+G+++GG +L V + S ++E+
Sbjct: 416 YGNVERVKKIKD--YAFVHFEDRDCAVKAMQEIDGKELGGARLEVSLAKPPSDKKKKEEI 473
Query: 179 PNSHDARDGPII-GRGTGF 196
+ + R +I GRG GF
Sbjct: 474 LRARERRMTQMIYGRG-GF 491
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT DL ++FG +G + SR F F+ FK +DA A +
Sbjct: 217 NNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEE 276
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G R +K F + K + +L++ + ++ ++L
Sbjct: 277 LNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQL 336
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F +G I K ++D N + FV +S E+A++AL +NG+ I G+ L V F +
Sbjct: 337 CELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQ 396
Query: 170 SQPSRR 175
+ R+
Sbjct: 397 RKEDRK 402
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 114/281 (40%), Gaps = 53/281 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFA--FVYFKRVEDAKAAKDA 75
+L+VG+L A TD+ L E F G + V RSF +V F DA A +
Sbjct: 40 SLYVGDLEASVTDSQLYE-FQPGGQVMSVRVCRDIRLGRSFGKPYVNFNNPVDAARALEL 98
Query: 76 LQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
L + G PI++ ++ S+ ++++ + + + + L + F FGNI K
Sbjct: 99 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 158
Query: 131 KD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSHDA 184
D FV+Y + E A A+K++NG I + + V FLR Q RE NS D
Sbjct: 159 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQ--ERE---NSVDK 213
Query: 185 RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMI 244
+ F N S + S ++ VG MD +
Sbjct: 214 TKFNNV-----FVKNLSESTTKEDLVKIFGAYGNITSAVIMVG------MDGK------- 255
Query: 245 LFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
SR + F+ F+S D+A RA E L G+ ND
Sbjct: 256 ------------SRCFGFINFKSPDDAARAVEELNGKKIND 284
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS +D +L ++FG+FG S+ F FV F+ +DA A DA
Sbjct: 224 TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDA 283
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R +K +F + K + +L+V + ++V+ ++L
Sbjct: 284 LNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKL 343
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F FG I K ++D + FV +S E+A A+ +NG+ I + L V +
Sbjct: 344 REHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQ 403
Query: 170 SQPSRR 175
+ R+
Sbjct: 404 RKEDRK 409
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 115/287 (40%), Gaps = 60/287 (20%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L A TD+ L E F + G + V TT S + +V + +DA A
Sbjct: 44 TTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRAL 103
Query: 74 DALQGSDFRGNPIKIEFA-RPAKPSK----HLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
+ L G I++ ++ R K ++++ + +++ + L E F FG I K
Sbjct: 104 NELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCK 163
Query: 129 FLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHD 183
D FV+Y E A A+ +NG + +Q+ V P H
Sbjct: 164 VAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYV------------GPFVHK 211
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
+ P G F++ Y ++ +S + ++ L+
Sbjct: 212 LQRDP-SGEKVKFTN---VYVKNLSES-----------------------LSDEELNKVF 244
Query: 244 ILFG-----EIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
FG I R S+ + FV F + D+A RA + L G+ F+D
Sbjct: 245 GEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDD 291
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 106/284 (37%), Gaps = 47/284 (16%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
N+++ NL L E F FG + S+ + FV + E A+ A D L
Sbjct: 134 NIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKL 193
Query: 77 QGSDFRGNPIKI-----EFARPAKPSK----HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
G + + + R K +++V +S+++S EEL + F +FG
Sbjct: 194 NGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSC 253
Query: 128 KFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
++DG FV + +DAA A+ +NG+ ++W
Sbjct: 254 VIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDD---------------KEW---- 294
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
+G+ S+ + K+ QS S + SV D+ H A
Sbjct: 295 ------FVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFA 348
Query: 243 ---MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLF 283
I ++ R S SR FV F + +EA RA + G++
Sbjct: 349 PFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMI 392
>gi|49355765|ref|NP_115657.2| ELAV-like protein 3 isoform 2 [Homo sapiens]
gi|119604627|gb|EAW84221.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Homo sapiens]
gi|261861050|dbj|BAI47047.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3
[synthetic construct]
gi|380783931|gb|AFE63841.1| ELAV-like protein 3 isoform 2 [Macaca mulatta]
Length = 360
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 31 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 85
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 86 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 146 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 205
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 206 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 265
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 266 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 325
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 326 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 356
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 40/274 (14%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL A T+ + LFG+ G + + +AF+ F A A A+
Sbjct: 10 LYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAATALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
+K+ +A P K H++VG +S + L + F FG I + + ++
Sbjct: 70 VVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSR-REQWPNSHD 183
D T AFV + + DA A++ +NG+ +G +R ++ R PS+ E P+S
Sbjct: 130 DPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKR 189
Query: 184 ARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAM 243
A+ P N+ P + ++ G S + E ++ N
Sbjct: 190 AK---------------------QPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTF 228
Query: 244 ILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEG 277
FG+I+ ++ + + Y+F+ F + + A A E
Sbjct: 229 SQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEA 262
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 35/179 (19%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + L++ F FG + T S+ +AFV F + DA+AA A
Sbjct: 97 HIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQA 156
Query: 76 LQGSDFRGNPIKIEFARPAKPSK----------------------------HLWVGGISQ 107
+ G I+ ++ PSK ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTS 216
Query: 108 TVSKEEL-EEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
V E+L + F +FG I+D + +D AF+ ++ E AA A++ + +I G ++
Sbjct: 217 NVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKC 275
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 21/293 (7%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN++ + T++ L E+F G ++ K+ SF FV + A A L G
Sbjct: 74 VYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGRH 133
Query: 81 FRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
G IK+ +A + + H++VG +S V+ L F + + D + + D
Sbjct: 134 VYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNK 193
Query: 135 TA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGP 188
T FV + ++A A+ + G+ +G Q+R ++ S + ++H+A
Sbjct: 194 TGRSRGYGFVSFRNQQEAETAIAEMTGKWLGSRQIRCNWATKNNSEEKPETDNHNA---V 250
Query: 189 IIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFG 247
++ G S N+SA S S ++ P ++VG V DE H + G
Sbjct: 251 VLTNG---SSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELHRHFYNLGVG 307
Query: 248 EIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPG 300
IE ++ + + FV + + EA A + G + I + PG
Sbjct: 308 AIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPTPPG 360
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 38/287 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL ++ L LF + GA+ + +AFV F + A A A+
Sbjct: 10 LYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F +K+ +A P K H++VG +S + + L+E F FG I + + ++
Sbjct: 70 SFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + +A A+ +NG+ +G +R ++ +P H
Sbjct: 130 DPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNN 189
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
P Y+ + QSS P + ++ G + DE ++
Sbjct: 190 SKP-------------NYEEVYNQSS-------PTNCTVYCGGFTNGITDE-LIKKTFSP 228
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
FG I+ I+ + + Y+F++F + + A A E N + +
Sbjct: 229 FGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFW 275
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 33/177 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + LKE F FG + T S+ +AFV F + +A+AA +A
Sbjct: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINA 156
Query: 76 LQGSDFRGNPIKIEFARP---------------AKPSKH------------LWVGGISQT 108
+ G I+ ++ +KP+ ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNG 216
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ E +++ F FG I+D + KD AF++++ E A A+++ + +I G ++
Sbjct: 217 ITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKC 273
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 17/153 (11%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L + T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 68 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYIDPKDAEKAI 126
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 127 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 186
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQ 157
D T F+ + + +A EA+K +NG++
Sbjct: 187 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQK 219
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT DL ++FG++G++ SR F F+ F+ + A A
Sbjct: 225 NNVFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGKSRCFGFINFENPDAASRAVQE 284
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
L G R +K F + K + +L++ + ++ ++L
Sbjct: 285 LNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQL 344
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F FG I +K ++D N + FV +S E+A++AL +NG+ I G+ L V F +
Sbjct: 345 RELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQ 404
Query: 170 SQPSRR 175
+ R+
Sbjct: 405 RKEDRK 410
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 68/292 (23%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L +D+ L ELF + G VT+ S +A+V F DA A
Sbjct: 44 PTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARA 103
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+ L + PI++ ++ S+ ++++ + +T+ + L E F FG I
Sbjct: 104 LEVLNFAVLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILSC 163
Query: 128 KFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D FV+Y + E A A+K++NG I + + V FLR Q
Sbjct: 164 KVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQ---------- 213
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
RD HS + ++ + +N +K E +L
Sbjct: 214 --ERD-------------HS-FDKTKFNNVFVKNLSESTTK-------------EDLLK- 243
Query: 242 AMILFGEIERIKSY--------PSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+FGE I S SR + F+ F + D A RA + L G+ ND
Sbjct: 244 ---VFGEYGSITSAVVMIGMDGKSRCFGFINFENPDAASRAVQELNGKKIND 292
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS--------SRSFAFVYFKRVEDAKAAK 73
NL++ NL D L+ELF FG K+T+Y S+ FV F E+A A
Sbjct: 329 NLYLKNLDDSIGDDQLRELFSNFG---KITSYKVMRDQNGLSKGSGFVAFSTREEASQAL 385
Query: 74 DALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQ 107
+ G G P+ + FA+ + K + SQ
Sbjct: 386 TEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQ 419
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVE 67
D + +NL V L D TD +L LF G ++ T S +AFV F
Sbjct: 95 DTQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEI 154
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNI 124
DA+ A +L G R +K+ +ARP S +L+V + +T++ +ELE+ F K+GNI
Sbjct: 155 DAQNAIKSLNGVTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNI 214
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNIN 154
L+D T AFV +++ E+A EA+ +N
Sbjct: 215 VQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 250
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 124/305 (40%), Gaps = 42/305 (13%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAA 72
EA P + L+VGNL + L LF + G + + +AFV F + A A
Sbjct: 4 EAYPKT-LYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTA 62
Query: 73 KDALQGSDFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNI 124
A+ F +K+ +A P K H++VG +S + + L E F FG I
Sbjct: 63 LIAMNKRVFLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEI 122
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDF-LRSQPSRREQ 177
+ + ++D T AFV + + +A A++ +NG+ +G +R ++ R P R +
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRAE 182
Query: 178 WPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQ 237
PN S + + Q+S P + ++ G S D+
Sbjct: 183 KPNQ---------------SKKQITFDEVYNQTS-------PTNTTVYCGGFASGLTDD- 219
Query: 238 MLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
++ FG I+ I+ + + Y+F++F S + A A E + N + +
Sbjct: 220 LVTKTFSRFGAIQDIRVFKDKGYAFIKFVSKESATHAIENIHNTEINGHTVKCFWGKENG 279
Query: 298 APGKD 302
G D
Sbjct: 280 GLGPD 284
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 8 FNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVE 67
F+ Y+ + +P ++ ++ G ++ TD + + F +FGA+ + + + +AF+ F E
Sbjct: 193 FDEVYN-QTSPTNTTVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFKDKGYAFIKFVSKE 251
Query: 68 DAKAAKDALQGSDFRGNPIKIEFAR 92
A A + + ++ G+ +K + +
Sbjct: 252 SATHAIENIHNTEINGHTVKCFWGK 276
>gi|401422974|ref|XP_003875974.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492214|emb|CBZ27488.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 696
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKD 74
SNL+V L D +L ELF K G ++ + T SR AFV FK VE+A+ A D
Sbjct: 233 SNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFKNVENAENAVD 292
Query: 75 ALQGSDFRGNPIKIEFAR------PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
AL G+ G+ I + A P P+ +V + TVS+ L E F +FG + D
Sbjct: 293 ALNGTTVNGHQITVRVANSRAAYLPGNPTNKTFVRNVPLTVSRTTLFEYFAQFGEVTDLS 352
Query: 129 FLKDG-----NTAFVEYSRLEDAAEALKNI 153
D N + S ED A+ NI
Sbjct: 353 IKSDTAQGRHNLSGRSTSTTEDGADDKLNI 382
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 94 AKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAA 147
A+ +L+V G+ +V +EL E F K G IE K + D +T AFV++ +E+A
Sbjct: 229 AEVRSNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFKNVENAE 288
Query: 148 EALKNINGRQIGGEQLRVDFLRSQPSRREQWP-NSHDARDGPI-IGRGTGF 196
A+ +NG + G Q+ V S+ + P N R+ P+ + R T F
Sbjct: 289 NAVDALNGTTVNGHQITVRVANSRAAYLPGNPTNKTFVRNVPLTVSRTTLF 339
>gi|47209605|emb|CAF93000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+++TT +++ LF ++G + + T ++F FV+ +A A L +
Sbjct: 4 IFIGNLASETTSDEIRSLFSQYGKISECTI--VKNFGFVHMDDKAEADEAIRNLHQYELN 61
Query: 83 GNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
G P+ +E +R ++ S L VG I+ T +EL F +FG + + +K N AFV
Sbjct: 62 GQPMNVELSRGKSRGSTKLHVGNIACT--NQELRAKFEEFGAVVECDIVK--NYAFVHME 117
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDF----LRSQP 172
R+EDA +A+ ++ G+ + V LR+ P
Sbjct: 118 RMEDAMDAINQLDNTAFKGKLMSVKLSTSRLRTAP 152
>gi|395850849|ref|XP_003797986.1| PREDICTED: ELAV-like protein 3 isoform 2 [Otolemur garnettii]
gi|402904299|ref|XP_003914984.1| PREDICTED: ELAV-like protein 3 isoform 2 [Papio anubis]
Length = 359
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 30 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 84
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 85 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 144
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 145 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 204
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 205 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 264
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 265 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 324
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 325 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 355
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 30/197 (15%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAK 70
+A +N+++ N + D +LKELF +FG V SR F FV +++ EDA
Sbjct: 87 KAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSRGFGFVSYEKHEDAN 146
Query: 71 AAKDALQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTV 109
A D + G + G I K E + + S++ L++ + T+
Sbjct: 147 KAVDEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTI 206
Query: 110 SKEELEEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
E+L + F FG+I K L+DG + FV + E+A +A+ +NGR +G + L V
Sbjct: 207 DDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFPSREEATKAVTEMNGRIVGSKPLYV 266
Query: 166 DFLRSQPSRREQWPNSH 182
+ + R+ N +
Sbjct: 267 ALAQRKEERKAHLTNQY 283
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 109/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ +AFV+F+ E A A + +
Sbjct: 1 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 60
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + V L+E F +FG
Sbjct: 61 GLLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 120
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K ++D + FV Y + EDA +A+ +NG+++ G+ + V + + R+ +
Sbjct: 121 VKVMRDSSGKSRGFGFVSYEKHEDANKAVDEMNGKEMSGKAIFVGRAQKKVERQAELKRK 180
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + L++ +D++ L
Sbjct: 181 FEQLKQERISRYQGVN--------------------------LYIKNLDDT-IDDEKLRK 213
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 214 EFSPFGSITSAKVMLEDGRSKGFGFVCFPSREEATKAVTEMNGRI 258
>gi|344240064|gb|EGV96167.1| ELAV-like protein 3 [Cricetulus griseus]
Length = 352
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 23 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 77
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 78 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 137
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 138 SQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 197
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 198 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 257
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 258 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 317
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 318 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 348
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELFGK+G V T S+ F FV F++ E+A A +
Sbjct: 178 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEEANKAVEE 237
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + + E + + S++ L++ + T+ E+L
Sbjct: 238 MNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 297
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 298 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 357
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 358 KEERKAHLTNQYMQR 372
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 50 VTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS------KHLWVG 103
+ T S +A+V F++ DA+ A D + +G PI+I +++ PS ++++
Sbjct: 33 MITRRSLFYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIK 91
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIG 159
+ +++ + L + F FGNI K + D N AFV + + A A++ +NG +
Sbjct: 92 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLN 151
Query: 160 GEQLRVDFLRSQPSR 174
++ V +S+ R
Sbjct: 152 DRKVFVGRFKSRKER 166
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVE 67
D EA ++NL + L + T ++ LF G +D T S + FV + R E
Sbjct: 43 DGEAK-ATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYVRQE 101
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNI 124
DA A +L G + IK+ FARP+ S +L+V G+++T+S+ +LE F FG I
Sbjct: 102 DAYKAVTSLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQI 161
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
+ L D T FV + R +A +A+ +NG+ G E + V F S
Sbjct: 162 ITSRILSDNVTGISKGVGFVRFDRKSEAEDAIDKLNGKIPAGCTEPITVKFANS 215
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 126/293 (43%), Gaps = 59/293 (20%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY------SSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + Y S +A V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ +++T+ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V +SQ R +
Sbjct: 128 CKVVSDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAEL---- 183
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
GTG + + Y ++ +MD++ L+
Sbjct: 184 ----------GTGTKEFTNVYIKNFGD-----------------------RMDDETLNGL 210
Query: 243 MILFGEIERIKSY-----PSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
FG+I +K S+ + FV F ++A++A + + G+ N I +
Sbjct: 211 FGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYV 263
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 32/196 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D L LFG+FG + V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKIEFARPAKPSKH----------------------LWVGGISQTVSKEE 113
+ G + G I + A+ K +H L+V + + E
Sbjct: 251 MNGKELNGKHIYVGRAQ-KKDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDER 309
Query: 114 LEEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
L++ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 310 LQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQ 369
Query: 170 SQPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 370 RKEERQAHLTNQYIQR 385
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 110/290 (37%), Gaps = 61/290 (21%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL+ + L + F FG + S S+ FV+F+ E A+ A + +
Sbjct: 100 NVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E K ++++ + E L F +FG I
Sbjct: 160 GMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILS 219
Query: 127 FKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D G + FV + R EDA +A+ +NG+++ G+ + V
Sbjct: 220 VKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYV---------------- 263
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQ-----MDE 236
GR D H+ K Q + ++ I + G V+ +D+
Sbjct: 264 ---------GRAQKKDDRHTELKHKFEQVTQDKS-------IRYQGINLYVKNLDDGIDD 307
Query: 237 QMLHNAMILFGEIERIKSYP----SRNYSFVEFRSVDEARRAKEGLQGRL 282
+ L FG I K S+ + FV F S +EA +A + GR+
Sbjct: 308 ERLQKEFSPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNGRI 357
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELF-GKFGALD------KVTTYSSRSFAFVYFKRVED 68
E +++VG+L+ D TDA L ELF K+ ++ T SR + FV F D
Sbjct: 192 EISSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDND 251
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAK-----------------PSKHLWVGGISQTVSK 111
A + G PI++ A P + ++ ++VGG+ VS+
Sbjct: 252 KIHAMTEMNGVYCSTRPIRVGPATPRRSQGDSGTSPPRQSHVDSTNRTVYVGGLDPNVSE 311
Query: 112 EELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQ 171
+EL + F K+G++ K FV++ DA EAL +NG IG + +R+ + RS
Sbjct: 312 DELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALHGLNGSTIGKQAVRLSWGRSP 371
Query: 172 PSRREQWPNSH 182
S++ + + H
Sbjct: 372 ASKQSRGDSGH 382
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 116/302 (38%), Gaps = 66/302 (21%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSR------SFAFVYFKRVEDAKAAKDAL 76
+WVG+L + L FG G + + +R + F+ F +A+ AL
Sbjct: 106 IWVGDLQYWMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFY---THVSAEKAL 162
Query: 77 QGSDFRGNPI-------KIEFA-------RPAKPSKH-LWVGGISQTVSKEELEEGFL-K 120
Q +F G+ + K+ +A R S H ++VG ++ V+ L E F K
Sbjct: 163 Q--NFSGHVMPNTDRAFKLNWASYSMGEKRSEISSDHSIFVGDLAVDVTDAMLLELFSNK 220
Query: 121 FGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
+ +++ K + D NT FV + D A+ +NG +RV
Sbjct: 221 YRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRV--------- 271
Query: 175 REQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQ 233
GP R + S ++SH S+ ++ ++VG P+V
Sbjct: 272 ------------GPATPRRSQGDSGTSPPRQSHVDST---------NRTVYVGGLDPNVS 310
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 293
DE L A +G++ +K + FV+F + +A A GL G + + +
Sbjct: 311 EDE--LRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALHGLNGSTIGKQAVRLSWG 368
Query: 294 SS 295
S
Sbjct: 369 RS 370
>gi|157870247|ref|XP_001683674.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126740|emb|CAJ05119.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 692
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDK------VTTYSSRSFAFVYFKRVEDAKAAKD 74
SNL+V L D +L ELF K G ++ + T SR AFV FK VE A+ A D
Sbjct: 230 SNLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFKNVEHAENAVD 289
Query: 75 ALQGSDFRGNPIKIEFAR------PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
AL G+ G+ I + A P P+ +V + TVS+ L E F +FG + D
Sbjct: 290 ALNGTTVNGHQITVRVANSRAAYLPGNPTNKTFVRNVPLTVSRTTLFEYFAQFGEVTDLS 349
Query: 129 FLKDG-----NTAFVEYSRLEDAAEALKNI 153
D N + S ED A+ NI
Sbjct: 350 IKSDTAQGRHNPSGRSASTTEDGADDKLNI 379
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 99 HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKN 152
+L+V G+ +V +EL E F K G IE K + D +T AFV++ +E A A+
Sbjct: 231 NLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFKNVEHAENAVDA 290
Query: 153 INGRQIGGEQLRVDFLRSQPSRREQWP-NSHDARDGPI-IGRGTGF 196
+NG + G Q+ V S+ + P N R+ P+ + R T F
Sbjct: 291 LNGTTVNGHQITVRVANSRAAYLPGNPTNKTFVRNVPLTVSRTTLF 336
>gi|311248628|ref|XP_003123218.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Sus
scrofa]
Length = 359
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 30 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 84
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 85 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 144
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 145 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 204
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 205 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 264
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 265 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 324
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 325 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 355
>gi|86262142|ref|NP_063922.2| RNA-binding protein 14 [Mus musculus]
gi|73621447|sp|Q8C2Q3.1|RBM14_MOUSE RecName: Full=RNA-binding protein 14; AltName: Full=RNA-binding
motif protein 14
gi|26353152|dbj|BAC40206.1| unnamed protein product [Mus musculus]
gi|74195530|dbj|BAE39579.1| unnamed protein product [Mus musculus]
gi|148701118|gb|EDL33065.1| mCG8382, isoform CRA_e [Mus musculus]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V + S+ F FV F++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANQAVED 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + + A A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ +AFV+F+ + A A + +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + E L+E F K+G
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLS 219
Query: 127 FKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D G + FV + + EDA +A++++NG+ I G+ + V + + R+ +
Sbjct: 220 VKVMTDPSGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQAELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + +N D +D++ L
Sbjct: 280 FEQLKQERISRYQGV-------------NLYIKNLDD--------------TIDDEKLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|20151563|gb|AAM11141.1| LD15253p [Drosophila melanogaster]
Length = 1521
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 14 DKEAPPSS-NLWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAK 70
D+ P S+ L++GNL D T +L+ F FG + ++ ++AF + +
Sbjct: 164 DEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVV 223
Query: 71 AAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
A + G N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG +
Sbjct: 224 KAMRKMDGEHLGSNRIKLGFGK-SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSID 282
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
++ A V Y ++++A A+K++ G + ++L+VDF
Sbjct: 283 RNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDF 319
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 117/302 (38%), Gaps = 76/302 (25%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 72 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 131
Query: 77 QGSDFRGNPIKIE----------FARPA---------KPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 132 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSH 191
Query: 118 FLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
F FG I + K G A F +YS + +A++ ++G +G ++++ F +S P
Sbjct: 192 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMP--- 248
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
+ +W+ ++
Sbjct: 249 ---------------------------------------------TNCVWIDGVDE-KVS 262
Query: 236 EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSS 295
E L + FG + ++ +R + V + V A+ A + ++G + ++ + F+S
Sbjct: 263 ESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFASR 322
Query: 296 EL 297
E
Sbjct: 323 EC 324
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ +R A V + +V++A+AA ++G
Sbjct: 248 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRG 307
Query: 79 SDFRGNPIKIEFA 91
+ R ++++FA
Sbjct: 308 TILRRKKLQVDFA 320
>gi|62460492|ref|NP_001014901.1| RNA-binding protein 14 [Bos taurus]
gi|73621446|sp|Q5EA36.1|RBM14_BOVIN RecName: Full=RNA-binding protein 14; AltName: Full=RNA-binding
motif protein 14
gi|59857831|gb|AAX08750.1| RNA binding motif protein 14 [Bos taurus]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 225
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 226 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 285
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 286 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 345
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 346 KEERQAHLTNQYMQR 360
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 75 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 134
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 135 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 194
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 195 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 254
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 255 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 287
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 288 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 332
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 124/290 (42%), Gaps = 43/290 (14%)
Query: 50 VTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS------KHLWVG 103
+ T S +A+V F++ DA+ A D + +G P++I +++ PS ++++
Sbjct: 21 MITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIK 79
Query: 104 GISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIG 159
+ +++ + L + F FGNI K + D N + FV + E A A++ +NG +
Sbjct: 80 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLN 139
Query: 160 GEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGP 219
++ F+ SR+E R+ + R F++ + + G + D
Sbjct: 140 DRKV---FVGRFKSRKE--------REAELGARAKEFTNVYI--------KNFGEDMDDE 180
Query: 220 PSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQ 279
K L+ + P++ + ++ +S S+ + FV F ++A++A + +
Sbjct: 181 RLKDLFGKFGPALSV-------------KVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 227
Query: 280 GRLFNDPRITIMFSSSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLD 329
G+ N +I + + ++ + + K R + G + LD
Sbjct: 228 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 277
>gi|426229023|ref|XP_004008593.1| PREDICTED: ELAV-like protein 3 isoform 1 [Ovis aries]
Length = 359
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 30 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 84
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 85 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 144
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 145 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKF-AN 203
Query: 171 QPSRR-------EQWPNSHDARDGPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN--- 215
PS++ + + +S GP+ + F DN + AY KR P + G +
Sbjct: 204 NPSQKTGQALLTQLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLA 263
Query: 216 ---RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVE 264
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 264 GVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVT 323
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 324 MTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 355
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKELF K+G V T SR F FV +++ EDA A +
Sbjct: 192 TNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGKSRGFGFVSYEKHEDANKAVEE 251
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G++ G + K E + + S++ L++ + T+ E+L
Sbjct: 252 MNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 311
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 312 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 371
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 372 KEERKAHLTNQYMQR 386
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 10 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 69
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 70 LDTMNFDVVKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 128
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N AFV + + A A++ +NG + ++ V +S+ R
Sbjct: 129 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 180
>gi|344295811|ref|XP_003419604.1| PREDICTED: RNA-binding protein 4B-like [Loxodonta africana]
Length = 359
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 23/195 (11%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA---LQGS 79
L++GNL + T+ +++ LF ++G + + +++ FV+ +ED AA+DA L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVH---IEDKTAAEDAIRNLHHY 58
Query: 80 DFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G I +E ++ +K S L VG IS T + +EL F ++G + + +KD AFV
Sbjct: 59 KLHGVNINVEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD--YAFV 116
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ------WPNSHDARDGP 188
R EDA EA++ ++ + G+++ V LR+ P +Q H +++ P
Sbjct: 117 HMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCGKEGHWSKECP 176
Query: 189 I--IGRGTGFSDNHS 201
+ GR F++ +S
Sbjct: 177 VDRTGRVADFAEQYS 191
>gi|383415143|gb|AFH30785.1| RNA-binding protein 14 isoform 1 [Macaca mulatta]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+NL++ NL T + +E+F K+G + +S+ F FV ++ E+A++A DA
Sbjct: 225 TNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHEEAQSAVDA 284
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L +D RG + + E A+ K SK+ L++ + V E+L
Sbjct: 285 LHDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYIKNLEDDVDDEKL 344
Query: 115 EEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
F FG I K ++D + FV +S ++A +A+ +N + IG + L V +
Sbjct: 345 RAEFEPFGTITSCKVMRDDKSTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQ 404
Query: 170 SQPSRREQW 178
+ RR+Q
Sbjct: 405 RREVRRQQL 413
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKDAL 76
N+++ NL + L + F FG + KV T S+ + FV+++ E A+ A A+
Sbjct: 133 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETGEAAETAIKAV 192
Query: 77 QGSDFRGNPIKIEF--ARPAKPSK---------HLWVGGISQTVSKEELEEGFLKFGNIE 125
G + + + +R + SK +L++ + +V+++E EE F K+GN+
Sbjct: 193 NGMLLNDKKVYVGYHISRKERQSKLDEMKAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVT 252
Query: 126 D--FKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPN 180
+ ++GN+ FV Y E+A A+ ++ I G++L V + + R E+
Sbjct: 253 SAIVQVDEEGNSKGFGFVNYEHHEEAQSAVDALHDTDIRGKKLFVSRAQKKAEREEELRR 312
Query: 181 SHD 183
S++
Sbjct: 313 SYE 315
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 16/172 (9%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDAL 76
L+VG L T+A L E+F G + + T S +A+V + D + A + L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 77 QGSDFRGNPIKIEFAR--PA---KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
S + +I +++ PA ++++ + + + + L + F FGN+ K
Sbjct: 106 NYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 132 DGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
D + FV Y E A A+K +NG + +++ V + S+ R+ +
Sbjct: 166 DEHGRSKGYGFVHYETGEAAETAIKAVNGMLLNDKKVYVGYHISRKERQSKL 217
>gi|440899388|gb|ELR50691.1| RNA-binding protein 14 [Bos grunniens mutus]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRRLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRRLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|410906771|ref|XP_003966865.1| PREDICTED: RNA-binding protein 4.1-like [Takifugu rubripes]
Length = 416
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDFR 82
+++GNL+++TT +++ LF ++G + + T ++F FV+ +A A L +
Sbjct: 4 IFIGNLASETTSDEIRSLFSQYGKIAECTI--VKNFGFVHMDDKAEADEAIRNLHQYELN 61
Query: 83 GNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYS 141
G P+ +E +R ++ S L VG I+ T +EL F +FG + + +K N AFV
Sbjct: 62 GQPMNVELSRGKSRGSTKLHVGNIACT--NQELRAKFEEFGAVLECDIVK--NYAFVHME 117
Query: 142 RLEDAAEALKNINGRQIGGEQLRVDF----LRSQP 172
R+EDA +A+ ++ G+ + V LR+ P
Sbjct: 118 RMEDAMDAINQLDNTAFKGKLMSVKLSTSRLRTAP 152
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ F+ SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV---FVGRFKSRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|197099062|ref|NP_001125363.1| RNA-binding protein 14 [Pongo abelii]
gi|73621448|sp|Q5RC41.1|RBM14_PONAB RecName: Full=RNA-binding protein 14; AltName: Full=RNA-binding
motif protein 14
gi|55727832|emb|CAH90669.1| hypothetical protein [Pongo abelii]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 30/188 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ TTD DLK +F + GA+ S+ F FV F+ V+DA A +A
Sbjct: 210 NNIYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFENVDDAAKAVEA 269
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELE 115
L G F R +K F + + + +L++ + +V+ E+L+
Sbjct: 270 LNGKKFDDKEWYVGKAQKKSERELELKGRFEQSLESVEKYQAVNLYIKNLDDSVNDEKLK 329
Query: 116 EGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
E F FG I K + D + + FV +S E+A+ AL +NG+ + + L V +
Sbjct: 330 ELFSDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPAQR 389
Query: 171 QPSRREQW 178
+ RR +
Sbjct: 390 KEERRARL 397
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 54/283 (19%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKD 74
++L+VG+L + TD+ L +LF + G + V +T S + +V + +DA A D
Sbjct: 31 TSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 90
Query: 75 ALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
L + P++I ++ PS ++++ + +T+ + L + F FGNI K
Sbjct: 91 VLNFTPLNNKPLRIMYSH-RDPSIRKSGMANIFIKNLDKTIDHKALHDTFSSFGNILSCK 149
Query: 129 FLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRV-DFLRSQPSRREQWPNSH 182
D + FV++ E A A+ +NG I +Q+ V +FLR Q
Sbjct: 150 VATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLINDKQVYVGNFLRKQ----------- 198
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
RD + F++ Y ++ +S+ + S+ + + +A
Sbjct: 199 -ERDSAL--SNIKFNN---IYVKNLAESTTDEDLK-------------SIFEEHGAITSA 239
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
+++ R S+ + FV F +VD+A +A E L G+ F+D
Sbjct: 240 VVM-----RDADGKSKCFGFVNFENVDDAAKAVEALNGKKFDD 277
>gi|2078531|gb|AAC53171.1| Mlark [Mus musculus]
Length = 367
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 15/164 (9%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA---LQG 78
L++GNL + T+ +++ LF ++G + + +++ FV+ +ED AA+DA L
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVH---IEDKTAAEDAIRNLHH 57
Query: 79 SDFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
G I +E ++ +K S L VG IS T + +EL F ++G + + +KD AF
Sbjct: 58 YKLHGVNINVEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD--YAF 115
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ 177
V R EDA EA++ ++ + G+++ V LR+ P +Q
Sbjct: 116 VHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQ 159
>gi|410950486|ref|XP_003981936.1| PREDICTED: ELAV-like protein 3 isoform 1 [Felis catus]
gi|431918945|gb|ELK17812.1| ELAV-like protein 3 [Pteropus alecto]
Length = 352
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 23 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 77
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 78 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 137
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 138 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 197
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 198 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 257
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 258 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 317
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 318 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 348
>gi|301784863|ref|XP_002927842.1| PREDICTED: RNA-binding protein 14-like [Ailuropoda melanoleuca]
gi|281346285|gb|EFB21869.1| hypothetical protein PANDA_017685 [Ailuropoda melanoleuca]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|404501516|ref|NP_596879.1| RNA-binding protein 14 [Rattus norvegicus]
gi|392338034|ref|XP_003753424.1| PREDICTED: RNA-binding protein 14-like [Rattus norvegicus]
gi|392344818|ref|XP_003749082.1| PREDICTED: RNA-binding protein 14-like [Rattus norvegicus]
gi|149061997|gb|EDM12420.1| rCG48334, isoform CRA_e [Rattus norvegicus]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.6 bits (109), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|392567132|gb|EIW60307.1| hypothetical protein TRAVEDRAFT_70736 [Trametes versicolor
FP-101664 SS1]
Length = 1299
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 90/228 (39%), Gaps = 59/228 (25%)
Query: 1 MAPPPSKFNRAYDDK-EAP------PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY 53
+A P NRA K E P P+ +LW+GNL + + L +F +GA++ +
Sbjct: 424 LAAPSQGQNRAVSPKSENPSGQMQTPTRSLWIGNLDSSFSSEQLIHVFAPYGAIESLRLL 483
Query: 54 SSRSFAFVYFKRVEDAKAAKDALQ---GSDF---RGNPIKIEFAR-------PAK----- 95
+ FV F DA AKD + G D G ++I F + PAK
Sbjct: 484 PEKECGFVNFVDQADAIRAKDDVLNRLGGDIGMPNGQTVRIGFGKADSAPVAPAKGANLN 543
Query: 96 -------------------------------PSKHLWVGGISQTVSKEELEEGFLKFGNI 124
P++ LW+G I T + + F +G I
Sbjct: 544 SPIATSPGGVLGKAGSNNVGLSGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPI 603
Query: 125 EDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQ---LRVDFLR 169
E + L N F+ + RL+DA A K +NGR + G +R+ F +
Sbjct: 604 ESARVLTHKNCGFINFERLDDAVRARKALNGRDVLGSDVGAIRIGFAK 651
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + + S E+L F +G IE + L + FV + DA A ++
Sbjct: 449 PTRSLWIGNLDSSFSSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 508
Query: 156 RQIG------GEQLRVDFLRSQ-----PSRREQWPNSHDARDGPIIGRGTGFSDNHSAYK 204
R G G+ +R+ F ++ P++ + G ++G+ G ++ +
Sbjct: 509 RLGGDIGMPNGQTVRIGFGKADSAPVAPAKGANLNSPIATSPGGVLGKA-GSNNVGLSGM 567
Query: 205 RSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVE 264
+ QS+ P++ LW+G PS +L + +G IE + +N F+
Sbjct: 568 DAQLQST--------PTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFIN 618
Query: 265 FRSVDEARRAKEGLQGR 281
F +D+A RA++ L GR
Sbjct: 619 FERLDDAVRARKALNGR 635
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 572 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 631
Query: 76 LQGSDFRGN---PIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFG-NIEDFKFLK 131
L G D G+ I+I FA+ + GG + + G L G I + +K
Sbjct: 632 LNGRDVLGSDVGAIRIGFAKVPVKNGQDGSGGQDEGANVNVQGVGDLSVGATIHALRNIK 691
Query: 132 DGNTAFVEYSRLEDAAE 148
+T V+ L + E
Sbjct: 692 GASTIPVDQQVLSGSLE 708
>gi|403302354|ref|XP_003941825.1| PREDICTED: ELAV-like protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 352
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 23 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 77
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 78 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 137
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 138 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 197
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 198 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 257
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 258 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 317
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 318 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 348
>gi|354496138|ref|XP_003510184.1| PREDICTED: RNA-binding protein 14 [Cricetulus griseus]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 140/336 (41%), Gaps = 49/336 (14%)
Query: 5 PSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRS 57
PS +RA + + +NL + L T+ +L+ LF + G + D+V T S
Sbjct: 487 PSSSSRAMEGTSSDSKTNLIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRV-TGQSLG 545
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEEL 114
+ F+ + DA+ A L G IK+ +ARP S +L++ G+ + ++++EL
Sbjct: 546 YGFIDYVHPRDAERAVCLLNGLQCPPKTIKVSYARPNSSSIRDANLYINGLPKNMTQKEL 605
Query: 115 EEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVD 166
E F +G+I + L D + F+ ++ +A EA+K +NG++ G E L V
Sbjct: 606 EHLFSPYGHIITSRILTDKASGTSRGVGFIRFNMKSEAEEAIKALNGQKPCGILEPLVVR 665
Query: 167 FLRSQPSRREQWPNSH--DARDGPII--GRGTGFSDNHSAYKRSH--PQSSVGRNRDGPP 220
F +Q Q P + GP+ R +G ++ + + S+ RD
Sbjct: 666 FAHNQTQVTPQNPLCQLPHSSHGPLPPQPRRSGLNNTPIPTRAAQNLTPSTTENTRD--- 722
Query: 221 SKILWVGYPPSVQM-------------DEQMLHNAMILFGEIERIK------SYPSRNYS 261
++ V +P DE +L FG + +K + + +
Sbjct: 723 --LVGVTFPGQTVTGWCIFIYNLAPDSDENILWQLFGPFGAVSNVKIIRDFNTNKCKRFG 780
Query: 262 FVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
FV S +EA A L G + + F ++++
Sbjct: 781 FVTMTSYNEAALAIASLNGYCLGGRVLQVSFKTNKV 816
>gi|296471614|tpg|DAA13729.1| TPA: RNA-binding protein 14 [Bos taurus]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGAVRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.6 bits (109), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|5454064|ref|NP_006319.1| RNA-binding protein 14 isoform 1 [Homo sapiens]
gi|402892710|ref|XP_003909552.1| PREDICTED: RNA-binding protein 14 [Papio anubis]
gi|426369329|ref|XP_004051645.1| PREDICTED: RNA-binding protein 14 isoform 1 [Gorilla gorilla
gorilla]
gi|73913750|sp|Q96PK6.2|RBM14_HUMAN RecName: Full=RNA-binding protein 14; AltName: Full=Paraspeckle
protein 2; Short=PSP2; AltName: Full=RNA-binding motif
protein 14; AltName: Full=RRM-containing coactivator
activator/modulator; AltName:
Full=Synaptotagmin-interacting protein;
Short=SYT-interacting protein
gi|3746787|gb|AAC64058.1| SYT interacting protein SIP [Homo sapiens]
gi|12653435|gb|AAH00488.1| RBM14 protein [Homo sapiens]
gi|119594958|gb|EAW74552.1| RNA binding motif protein 14, isoform CRA_a [Homo sapiens]
gi|167773197|gb|ABZ92033.1| RNA binding motif protein 14 [synthetic construct]
gi|193785611|dbj|BAG51046.1| unnamed protein product [Homo sapiens]
gi|355566267|gb|EHH22646.1| RNA-binding motif protein 14 [Macaca mulatta]
gi|380783623|gb|AFE63687.1| RNA-binding protein 14 isoform 1 [Macaca mulatta]
gi|384944744|gb|AFI35977.1| RNA-binding protein 14 isoform 1 [Macaca mulatta]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 60/320 (18%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFVYFKRVEDAKAAK 73
+NL V L T +LK LFG G + DK+T S + FV + +DA+ A
Sbjct: 38 TNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITG-QSLGYGFVNYVDPKDAEKAI 96
Query: 74 DALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
+ L G + IK+ +ARP+ S +L+V G+ +T++++ELE+ F ++G I + L
Sbjct: 97 NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 156
Query: 131 KDGNT------AFVEYSRLEDAAEALKNINGRQ--IGGEQLRVDF--------------- 167
D T F+ + + +A EA+K +NG++ E + V F
Sbjct: 157 VDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQKPPAATEPITVKFANNPSQKTNQAILSQ 216
Query: 168 LRSQPSRREQWPNSHDA---RDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK-- 222
L P+RR P + A R P+ G S G N G
Sbjct: 217 LYHSPNRRYPAPLAQQAQRFRFPPMTIDGM--------------TSLAGINIPGHAGTGW 262
Query: 223 ILWVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKE 276
++V Y + DE +L FG + +K + + + FV + DEA A
Sbjct: 263 CIFV-YNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIA 321
Query: 277 GLQGRLFNDPRITIMFSSSE 296
L G D + + F +++
Sbjct: 322 SLNGYRLGDRVLQVSFKTNK 341
>gi|62897219|dbj|BAD96550.1| RNA binding motif protein 14 variant [Homo sapiens]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|443896159|dbj|GAC73503.1| RNA-binding protein [Pseudozyma antarctica T-34]
Length = 1243
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNIN 154
+P++ LW+G + TV+ +EL + F +G IE F+ + + AFV Y L DA A +++
Sbjct: 507 QPTRSLWIGHLRPTVTSQELVQAFSPYGAIETFRLVPEKGCAFVNYVDLADAVRAREDVV 566
Query: 155 GRQIGGE---------QLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKR 205
R G Q+RV F + E P P +G T D++++
Sbjct: 567 ARLGGRLGLGTLGPEAQVRVGF-----GKPEAVPQ-------PGLGGFTPMLDSYASSLD 614
Query: 206 SHPQSSVG-RNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFV 263
+ G + PS+ LW+G PP+ D +L + FG IE ++ S++ +F+
Sbjct: 615 AAAAELGGVEAANHEPSRALWIGSIPPTTSSD--VLVSVFAPFGSIESVRVLSSKSCAFI 672
Query: 264 EFRSVDEARRAKEGLQGRLFNDPR---ITIMFSSSELAPGKDY 303
F ++A A++ L GR P + I F+ P + Y
Sbjct: 673 NFERTEDAMTARKLLNGRDVLGPEVGAVKIGFAKVPSKPSEGY 715
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
PS LW+G++ T+ L +F FG+++ V SS+S AF+ F+R EDA A+ L G
Sbjct: 630 PSRALWIGSIPPTTSSDVLVSVFAPFGSIESVRVLSSKSCAFINFERTEDAMTARKLLNG 689
Query: 79 SDFRG---NPIKIEFAR-PAKPSK 98
D G +KI FA+ P+KPS+
Sbjct: 690 RDVLGPEVGAVKIGFAKVPSKPSE 713
>gi|395851689|ref|XP_003798385.1| PREDICTED: RNA-binding protein 14 [Otolemur garnettii]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|345783055|ref|XP_852283.2| PREDICTED: RNA-binding protein 14 isoform 1 [Canis lupus
familiaris]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|15022507|gb|AAK77961.1|AF315632_1 coactivator activator [Homo sapiens]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 33/291 (11%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSR-------SFAFVYFKRVED 68
EAP ++L+VGNLS T+ L E+F G + V R ++ FV + +
Sbjct: 11 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRA 70
Query: 69 AKAAKDALQGSDFRGNPIKIEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKF 121
A+ A L G I++ +A + +K H++VG +S V+ E L + F F
Sbjct: 71 AETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSAF 130
Query: 122 GNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G + D + + D N+ F+ + DA +A+ +NG +G +RV++ +Q ++
Sbjct: 131 GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-NQKTQG 189
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG--YPPSVQ 233
G F Y++ Q++ P + ++VG P + Q
Sbjct: 190 GAPGGGARPSAGGGAPAPVNFQGGPLTYEQVLAQTA-------PYNTTVYVGNLVPYTTQ 242
Query: 234 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFN 284
D L ++ G + I+ R ++FV+ + + A +A LQG++ +
Sbjct: 243 ADLIPLFQSI---GYLSEIRMQADRGFAFVKLDTHEHAAQAIVQLQGQMVH 290
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%)
Query: 15 KEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKD 74
+ AP ++ ++VGNL TT ADL LF G L ++ + R FAFV E A A
Sbjct: 223 QTAPYNTTVYVGNLVPYTTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAQAIV 282
Query: 75 ALQGSDFRGNPIKIEFAR 92
LQG G PIK + +
Sbjct: 283 QLQGQMVHGRPIKCSWGK 300
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 84 NPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDG-------NTA 136
NP+ + A A HL+VG +S V++ L E F G ++ K + D N
Sbjct: 2 NPMGMGGAAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYG 61
Query: 137 FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRRE 176
FVEY + A AL+ +NGR+I ++RV++ +E
Sbjct: 62 FVEYMDMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKE 101
>gi|444510190|gb|ELV09525.1| RNA-binding protein 14 [Tupaia chinensis]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELHSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELHSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|346716308|ref|NP_001231150.1| RNA-binding protein 14 [Sus scrofa]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|344283287|ref|XP_003413403.1| PREDICTED: ELAV-like protein 3 [Loxodonta africana]
Length = 360
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 48/331 (14%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 31 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 85
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 86 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 146 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 205
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFS-DN--HSAY--KRSHPQSSVGRN---- 215
+ Q +H AR GP+ + F DN + AY KR P + G +
Sbjct: 206 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAG 265
Query: 216 --RDGPPSKILWV--GYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEF 265
G + W Y S + DE +L FG + +K + + + FV
Sbjct: 266 VGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTM 325
Query: 266 RSVDEARRAKEGLQGRLFNDPRITIMFSSSE 296
+ DEA A L G + + + F +S+
Sbjct: 326 TNYDEAAMAIASLNGYRLGERVLQVSFKTSK 356
>gi|350539351|ref|NP_001233311.1| RNA-binding protein 14 [Pan troglodytes]
gi|397517055|ref|XP_003828735.1| PREDICTED: RNA-binding protein 14 isoform 1 [Pan paniscus]
gi|343958970|dbj|BAK63340.1| RNA-binding protein 14 [Pan troglodytes]
gi|410222928|gb|JAA08683.1| RNA binding motif protein 14 [Pan troglodytes]
gi|410256128|gb|JAA16031.1| RNA binding motif protein 14 [Pan troglodytes]
gi|410293820|gb|JAA25510.1| RNA binding motif protein 14 [Pan troglodytes]
gi|410339483|gb|JAA38688.1| RNA binding motif protein 14 [Pan troglodytes]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 44/285 (15%)
Query: 32 TTDADLKELFGKFGALDKVT----TYSSRSFAFVYFKRVEDAKAAKDALQGSDFRGNPIK 87
T+A + +LF + G T + + FV F A AA A+ G G +K
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVK 60
Query: 88 IEFARPAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA---- 136
+ +A K H++VG +S ++ E+++ F FG I D + +KD T
Sbjct: 61 VNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKG 120
Query: 137 --FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGT 194
FV + DA A++ + G+ +GG Q+R ++ +P +
Sbjct: 121 YGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK------------------ 162
Query: 195 GFSDNHSAYKRSHPQSSVGR--NRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERI 252
S Y+ + Q S ++ P + ++ G S + EQ++ FG+I I
Sbjct: 163 ------STYESNTKQLSYDEVVSQSSPNNCTVYCGGVTS-GLTEQLMRQTFSPFGQIMEI 215
Query: 253 KSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSEL 297
+ +P + YSFV F S + A A + G + + L
Sbjct: 216 RVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETL 260
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + T D+K F FG + + T S+ + FV F DA+ A
Sbjct: 79 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 138
Query: 76 LQGSDFRGNPIKIEFAR---PAKPSKH----------------------LWVGGISQTVS 110
+ G G I+ +A PA S + ++ GG++ ++
Sbjct: 139 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLT 198
Query: 111 KEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
++ + + F FG I + + D +FV +S E AA A+ ++NG I G ++ +
Sbjct: 199 EQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYW 255
>gi|431910218|gb|ELK13291.1| RNA-binding protein 14 [Pteropus alecto]
Length = 664
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|158299010|ref|XP_001689173.1| AGAP009990-PA [Anopheles gambiae str. PEST]
gi|157014163|gb|EDO63446.1| AGAP009990-PA [Anopheles gambiae str. PEST]
Length = 5072
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L+VGNL D T ++L++ F FG + ++ ++AF + + A + G
Sbjct: 215 LFVGNLEKDITGSELRKQFECFGEIIEIDIKKQGVSAYAFCQYSDIVSVVKAIRKMDGEH 274
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ G+S + S+ L F FG + ++ A + Y
Sbjct: 275 LGNNRIKLGFGK-SMPTNCVWLDGVSDSASENYLAAQFNHFGTVSQVSVDRERKLALIYY 333
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
+++ A A+K + G + G +L+VDF
Sbjct: 334 EQVQQAQAAVKEMRGVMLRGRKLQVDF 360
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 30/180 (16%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVT-----TYSSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL + ++D LK+ LF ++ KVT ++ +A V FK+ ED A +
Sbjct: 112 ICVRNLPSRSSDTSLKDGLFHEYKKHGKVTWVKVVGQNTDRYALVCFKKPEDVDKALEVS 171
Query: 77 QGSDFRGNPIKI------------EFARP---------AKPSKHLWVGGISQTVSKEELE 115
F G I++ EF RP K ++ L+VG + + ++ EL
Sbjct: 172 HDKLFFGCKIEVAPYAGYYDVDDNEF-RPYEAELDEYHPKSTRTLFVGNLEKDITGSELR 230
Query: 116 EGFLKFGNIEDFKFLKDGNT--AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
+ F FG I + K G + AF +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 231 KQFECFGEIIEIDIKKQGVSAYAFCQYSDIVSVVKAIRKMDGEHLGNNRIKLGFGKSMPT 290
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ +S ++ L F FG + +V+ R A +Y+++V+ A+AA ++G
Sbjct: 289 PTNCVWLDGVSDSASENYLAAQFNHFGTVSQVSVDRERKLALIYYEQVQQAQAAVKEMRG 348
Query: 79 SDFRGNPIKIEFA 91
RG ++++FA
Sbjct: 349 VMLRGRKLQVDFA 361
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 34/292 (11%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAK 73
++ +++VGN+ TD L+E+F G ++ K+ SF F+ + A A
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAI 173
Query: 74 DALQGSDFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+L G G PIK+ +A + P + +++VG + V+ L F + D
Sbjct: 174 LSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDA 233
Query: 128 KFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
+ + D T FV + +DA A+ ++NG+ +G Q+R ++ + E+
Sbjct: 234 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWATKGANAGEE---- 289
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK----ILWVG-YPPSVQMDE 236
I+ S+ S + +P N DGP + ++VG P M++
Sbjct: 290 -----KQILDTKVDLSNGSSESGKENP------NEDGPENNPQFTTVYVGNLPHEATMND 338
Query: 237 QMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRI 288
L + G IE ++ + + FV + + +EA A + G+L +I
Sbjct: 339 VHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQI 390
>gi|348565065|ref|XP_003468324.1| PREDICTED: RNA-binding protein 14-like [Cavia porcellus]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|291385475|ref|XP_002709279.1| PREDICTED: RNA binding motif protein 14 [Oryctolagus cuniculus]
Length = 667
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
>gi|403301165|ref|XP_003941269.1| PREDICTED: RNA-binding protein 14 [Saimiri boliviensis boliviensis]
Length = 669
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.6 bits (109), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKE F K+G V + S+ F FV F+R EDA A D
Sbjct: 191 TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDD 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + + E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 62/295 (21%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N AFV + + A A++ +NG + ++ V + RRE
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFK---CRRE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + + F++ Y ++ + MD++ L
Sbjct: 179 --REAELGAKAKEFTN---VYIKNFGED-----------------------MDDERLKET 210
Query: 243 MILFGEIERIK-----SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
+G+ +K S S+ + FV F ++A +A + + G+ N IMF
Sbjct: 211 FSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDDMNGKDVNG---KIMF 262
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 21/293 (7%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN++ + T++ L E+F G ++ K+ SF FV + A A L G
Sbjct: 73 VYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGRH 132
Query: 81 FRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGN 134
G IK+ +A + + H++VG +S V+ L F + + D + + D
Sbjct: 133 IYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNK 192
Query: 135 TA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGP 188
T FV + ++A A+ + G+ +G Q+R ++ S + ++H+A
Sbjct: 193 TGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNSEEKPETDNHNA---V 249
Query: 189 IIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG-YPPSVQMDEQMLHNAMILFG 247
++ G S ++SA S S + P ++VG V DE H + G
Sbjct: 250 VLTNG---SSSNSATDASQDGGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYSLGVG 306
Query: 248 EIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPG 300
IE I+ + + FV + + EA A + G + I + + PG
Sbjct: 307 AIEEIRVQQDKGFGFVRYSTHGEAALAIQMGNGLVVRGKPIKCSWGNKPTPPG 359
>gi|383422057|gb|AFH34242.1| RNA-binding protein 4B [Macaca mulatta]
Length = 359
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 23/195 (11%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA---LQGS 79
L++GNL + T+ +++ LF ++G + + +++ FV+ +ED AA+DA L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVH---IEDKTAAEDAIRNLHHY 58
Query: 80 DFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G I +E ++ +K S L VG IS T + +EL F ++G + + +KD AFV
Sbjct: 59 KLHGVNINVEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECDIVKD--YAFV 116
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ--W----PNSHDARDGP 188
R EDA EA++ ++ + G+++ V LR+ P +Q W H +++ P
Sbjct: 117 HMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGWYRCGKEGHWSKECP 176
Query: 189 I--IGRGTGFSDNHS 201
+ GR F++ ++
Sbjct: 177 VDRTGRVADFTEQYN 191
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NLS TT DL ++F ++G + SR F FV F+ +DA A +
Sbjct: 301 NNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEE 360
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G R +K F + K + ++L++ + ++ ++L
Sbjct: 361 LNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQL 420
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E F FG I K ++D N + FV +S E+A++AL +NG+ I G+ L V F +
Sbjct: 421 RELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQ 480
Query: 170 SQPSRR 175
+ R+
Sbjct: 481 RKEERK 486
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 52/284 (18%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P+++L+VG+L A+ TD+ L ELF + G V + S +A+V + DA A
Sbjct: 120 PTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARA 179
Query: 73 KDALQGSDFRGNPIKIEFARPAKPSK-----HLWVGGISQTVSKEELEEGFLKFGNIEDF 127
+AL + PI++ ++ S+ ++++ + +T+ + L + F FG I
Sbjct: 180 MEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSC 239
Query: 128 KFLKDG-----NTAFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNS 181
K D FV+Y + E A A+K++NG I + + V FLR Q E+ +S
Sbjct: 240 KVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQ----ERDNSS 295
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
A+ + F N S V S ++ +G MD +
Sbjct: 296 DKAKFNNV------FVKNLSESTTKEDLIKVFSEYGTITSAVVMIG------MDGK---- 339
Query: 242 AMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
SR + FV F S D+A RA E L G+ ND
Sbjct: 340 ---------------SRCFGFVNFESPDDAARAVEELNGKKIND 368
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 54/206 (26%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEA 149
P+ L+VG + V+ +L E F + G + + +D N+ A+V YS DAA A
Sbjct: 120 PTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARA 179
Query: 150 LKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
++ +N + + +RV + PS R RS
Sbjct: 180 MEALNFAPLNNKPIRVMYSNRDPSSR-----------------------------RSGSA 210
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSY-----PSRNYSFVE 264
+ +N D +D + LH+ FG I K S+ + FV+
Sbjct: 211 NIFIKNLDK--------------TIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQ 256
Query: 265 FRSVDEARRAKEGLQGRLFNDPRITI 290
+ + A+ A + L G L ND + +
Sbjct: 257 YEKEESAQSAMKSLNGMLINDKPVYV 282
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDAL 76
NL++ NL TD L+ELF FG + S+ FV F E+A A +
Sbjct: 405 NLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEM 464
Query: 77 QGSDFRGNPIKIEFARPAKPSKHLWVGGISQ 107
G G P+ + FA+ + K + SQ
Sbjct: 465 NGKMISGKPLYVAFAQRKEERKAMLQAQFSQ 495
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 123/301 (40%), Gaps = 48/301 (15%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++NL+VGNL A L ELF FG +D T S+ + FV + A A
Sbjct: 208 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 267
Query: 74 DALQGSDFRGNPIKIEFA-------RPAKPSKH-----LWVGGISQTVSKEELEEGFLKF 121
+ G G +K+ +PSK L+V +S +++ + L FL F
Sbjct: 268 KRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPF 327
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G + + K KD T FV+YS AAEA+ ++NGR + G ++ V + PS
Sbjct: 328 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVR-VSGIPS-- 384
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
PNS A + P R + S R L+V PS +D
Sbjct: 385 -TLPNS--AVESPSTTRNSAVE-----------SPSTTRTVKEIDMSNLYVCNMPS-SID 429
Query: 236 EQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRIT 289
+ L + FG+I + ++ ++ Y F++F + A +A + G L I
Sbjct: 430 TKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMII 489
Query: 290 I 290
+
Sbjct: 490 V 490
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 48/207 (23%)
Query: 99 HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKN 152
+L+VG + +V +L E FL FG I + + D T FV+YS A+EA+K
Sbjct: 210 NLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKR 269
Query: 153 INGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSV 212
+NGR + G L+V R +P+S D P
Sbjct: 270 MNGRLVEGTALKV--------RVTGFPSSEDNSQQP------------------------ 297
Query: 213 GRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYP------SRNYSFVEFR 266
+++ +K+ S+ M+ L + + FGE+ K S+ Y FV++
Sbjct: 298 --SKETDMAKLYVCNL--SLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYS 353
Query: 267 SVDEARRAKEGLQGRLFNDPRITIMFS 293
S A A L GRL + +I + S
Sbjct: 354 SPHHAAEAVIHLNGRLVDGRKIEVRVS 380
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 27/179 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
+NL+VG + + T+ +LF FG + + + + + V F A AA D L G
Sbjct: 602 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQ 661
Query: 81 FRGNPIKIEFA-RPAKPS--------------------KHLWVGGISQTVSKEELEEGFL 119
G+ + + A PA+ + +L+V + V+ E L + FL
Sbjct: 662 IGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFL 721
Query: 120 KFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
G I K + + T FV+++ AA AL ++NG + G L V P
Sbjct: 722 PCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 780
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
S L++ NL T + LF FG + KV + ++ V++ A A + G
Sbjct: 513 SRLYITNLPRSMTADKMVNLFAPFGQITKVLM--NLEYSLVWYADAPSATKAVQHMDGYM 570
Query: 81 FRGNPIKIEFARPA---------KPSK-----HLWVGGISQTVSKEELEEGFLKFGNIED 126
G + ++ + KP K +L+VG + ++++++ + F FG +
Sbjct: 571 VEGKRLVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQ 630
Query: 127 FKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ + V + AA A+ +++G QIGG L V
Sbjct: 631 ARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAV 669
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N + D +LKELF +FG V S+ F FV +++ EDA A +
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G + G I K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L +D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVMKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + E A +A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ +AFV+F+ E A A + +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + V L+E F +FG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K ++D + FV Y + EDA +A++ +NG+++ G+ + V + + R+ +
Sbjct: 220 VKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + L++ +D++ L
Sbjct: 280 FEQLKQERISRYQGVN--------------------------LYIKNLDDT-IDDEKLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 31/197 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFG-----ALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
+NL+V N++++TTD +E+F +FG +L+K + F FV ++ EDA A +A
Sbjct: 219 TNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEA 278
Query: 76 LQGSDFRGNPIKI-----------------EFARPAKPSKH----LWVGGISQTVSKEEL 114
L SD G + + E R K +K+ L+V + +V E+L
Sbjct: 279 LNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 115 EEGFLKFGNIEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
EE F +G I K ++ N FV +S E+A +A+ N + + G+ L V +
Sbjct: 339 EEEFAPYGTITSAKVMRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 170 SQPSRREQWPNSHDARD 186
+ RR Q AR+
Sbjct: 399 RKDVRRSQLAQQIQARN 415
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGAL--DKVTTYS---SRSFAFVYFKRVEDAKAAKD 74
S N+++ NL D + L + F FG + K+ T S+ F FV+F+ AK A D
Sbjct: 125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAID 184
Query: 75 ALQGSDFRGNPIKI--EFARPAKPSK---------HLWVGGISQTVSKEELEEGFLKFGN 123
AL G G I + +R + S+ +L+V I+ + E+ +E F +FG
Sbjct: 185 ALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQEMFAQFGP 244
Query: 124 IEDFKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
I KD + FV Y EDA +A++ +N + GE+L V + + R
Sbjct: 245 IVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQKKNERMHVL 304
Query: 179 PNSHDA 184
++A
Sbjct: 305 KKQYEA 310
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 14 DKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVE 67
D + +NL V L D TD +L LF G ++ T S +AFV F
Sbjct: 95 DTQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEI 154
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGFLKFGNI 124
DA+ A +L G R +K+ +ARP S +L+V + +T++ +ELE+ F K+GNI
Sbjct: 155 DAQNAIKSLNGVTVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNI 214
Query: 125 EDFKFLKDGNT------AFVEYSRLEDAAEALKNIN 154
L+D T AFV +++ E+A EA+ +N
Sbjct: 215 VQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 250
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 34/299 (11%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALD--KVTTYSSRSFAFVYFKRVEDAKAAKDALQGS 79
+++VGN+ TD+ L E+F G ++ K+ SF FV + A A +L G
Sbjct: 78 SVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAALAIVSLNGR 137
Query: 80 DFRGNPIKIEFARPAKPSK------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDG 133
G PIK+ +A + + +++VG + V+ L F + D + + D
Sbjct: 138 QLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQ 197
Query: 134 NTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDG 187
T FV + +DA A+ +NG+ +G Q+R ++ + E+ N+ D++
Sbjct: 198 KTGRSRGFGFVSFRNQQDAQTAINELNGKWLGNRQIRCNWATKGANAGEEKQNT-DSKGM 256
Query: 188 PIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSK----ILWVGYPPSVQMDEQMLHNAM 243
+ G+ + +A N DGP + ++VG P ++ +H
Sbjct: 257 VELINGSSEAGKENA------------NEDGPENNPQYTTVYVGNLPH-DINSNDVHRFF 303
Query: 244 ILF--GEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPG 300
L G IE ++ + + FV + + +EA A + G+L +I + S PG
Sbjct: 304 HLLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLVGGRQIKCSWGSKPTPPG 362
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF--VEYSRLEDAAEALKNIN 154
+ ++VG I V+ L E F G +E K ++ ++F V+Y AA A+ ++N
Sbjct: 76 CRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAALAIVSLN 135
Query: 155 GRQIGGEQLRVDFLRSQPSRRE 176
GRQ+ G+ ++V++ + R +
Sbjct: 136 GRQLFGQPIKVNWAYASTQRED 157
>gi|125977312|ref|XP_001352689.1| GA21193 [Drosophila pseudoobscura pseudoobscura]
gi|54641438|gb|EAL30188.1| GA21193 [Drosophila pseudoobscura pseudoobscura]
Length = 352
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 8/148 (5%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
L++GNL T +L+ LF K+G + V +++ FV+ + + + A L G
Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTV--VECDVVKNYGFVHMETEQQGRDAIQNLNGYVL 65
Query: 82 RGNPIKIEFAR----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
N IK+E A+ P P+ ++VG ++ E+ E F K+G + + ++ N F
Sbjct: 66 NDNAIKVEAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVR--NYGF 123
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRV 165
V + D +A+K +NGR + G+ L+V
Sbjct: 124 VHLDCVGDVQDAIKELNGRVVDGQPLKV 151
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ ++VGNL+ T +++ELF K+G + V R++ FV+ V D + A L G
Sbjct: 84 PTTKIFVGNLTDKTRAPEVRELFQKYGTV--VECDIVRNYGFVHLDCVGDVQDAIKELNG 141
Query: 79 SDFRGNPIKIEFA 91
G P+K++ +
Sbjct: 142 RVVDGQPLKVQVS 154
>gi|426387251|ref|XP_004060087.1| PREDICTED: ELAV-like protein 3 isoform 1 [Gorilla gorilla gorilla]
gi|355703162|gb|EHH29653.1| Hu-antigen C [Macaca mulatta]
Length = 339
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 139/318 (43%), Gaps = 35/318 (11%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 23 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 77
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 78 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 137
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 138 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 197
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKIL 224
+ Q +H AR GP+ + F + A + VG + +
Sbjct: 198 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRFSPIAIDGMSGLAGVGLSGGAAGAGWC 257
Query: 225 WVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGL 278
Y S + DE +L FG + +K + + + FV + DEA A L
Sbjct: 258 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 317
Query: 279 QGRLFNDPRITIMFSSSE 296
G + + + F +S+
Sbjct: 318 NGYRLGERVLQVSFKTSK 335
>gi|393909855|gb|EFO22008.2| transformer-2b6 [Loa loa]
Length = 469
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 17/111 (15%)
Query: 12 YDDK--------EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRS 57
YDD+ E PS L V LS TT+ DLKELF ++G LD V T SR
Sbjct: 279 YDDRRYTFSRRDEPEPSRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRG 338
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFA---RPAKPSKHLWVGGI 105
F FVYFK++EDA AK+ + G++ G+ I+I+++ RP P+ +++G +
Sbjct: 339 FGFVYFKKIEDAIEAKERVAGTEIDGHKIRIDYSITKRPHTPTPGIYMGAV 389
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAE 148
+PS+ L V G+S ++ +L+E F ++G++++ + + D T FV + ++EDA E
Sbjct: 293 EPSRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIE 352
Query: 149 ALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNH---SAYKR 205
A + + G +I G ++R+D+ ++R P P I G S +Y+R
Sbjct: 353 AKERVAGTEIDGHKIRIDY---SITKRPHTPT-------PGIYMGAVDSRRRGPPRSYRR 402
Query: 206 S-HPQSSVGRNRDGPPSK 222
S P S R RD PP++
Sbjct: 403 SPSPYRSYRRYRDSPPNR 420
>gi|296218875|ref|XP_002807420.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 14 [Callithrix
jacchus]
Length = 669
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VGN+SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|119627672|gb|EAX07267.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_g [Homo sapiens]
Length = 338
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 17/183 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L +D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K L+DG + FV +S E+A +A+ +NGR +G + L V + + R+ N +
Sbjct: 128 CKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQY 187
Query: 183 DAR 185
R
Sbjct: 188 MQR 190
>gi|312079180|ref|XP_003142063.1| transformer-2b6 [Loa loa]
Length = 424
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 17/111 (15%)
Query: 12 YDDK--------EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRS 57
YDD+ E PS L V LS TT+ DLKELF ++G LD V T SR
Sbjct: 234 YDDRRYTFSRRDEPEPSRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRG 293
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFA---RPAKPSKHLWVGGI 105
F FVYFK++EDA AK+ + G++ G+ I+I+++ RP P+ +++G +
Sbjct: 294 FGFVYFKKIEDAIEAKERVAGTEIDGHKIRIDYSITKRPHTPTPGIYMGAV 344
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAE 148
+PS+ L V G+S ++ +L+E F ++G++++ + + D T FV + ++EDA E
Sbjct: 248 EPSRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIE 307
Query: 149 ALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNH---SAYKR 205
A + + G +I G ++R+D+ ++R P P I G S +Y+R
Sbjct: 308 AKERVAGTEIDGHKIRIDY---SITKRPHTPT-------PGIYMGAVDSRRRGPPRSYRR 357
Query: 206 S-HPQSSVGRNRDGPPSK 222
S P S R RD PP++
Sbjct: 358 SPSPYRSYRRYRDSPPNR 375
>gi|195575469|ref|XP_002077600.1| GD23006 [Drosophila simulans]
gi|194189609|gb|EDX03185.1| GD23006 [Drosophila simulans]
Length = 1098
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 14 DKEAPPSS-NLWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAK 70
D+ P S+ L++GNL D T ++L+ F FG + ++ ++AF + +
Sbjct: 647 DEYHPKSTRTLFIGNLEKDITASELRGHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVV 706
Query: 71 AAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
A + G N IK+ F + + P+ +W+ G+ + V + L+ F +FG +
Sbjct: 707 KAMRKMDGEHLGSNRIKLGFGK-SMPTNCVWIDGVGEKVPESFLQSQFTRFGTVTKVSID 765
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ A V Y ++++A A+K++ G + G +L+VDF
Sbjct: 766 RSKQLALVLYDQVQNAQAAVKDMRGTILRGRKLQVDF 802
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 555 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 614
Query: 77 QGSDFRGNPIKIE----------FARPA---------KPSKHLWVGGISQTVSKEELEEG 117
F G I++E RP K ++ L++G + + ++ EL
Sbjct: 615 HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITASELRGH 674
Query: 118 FLKFGNIEDFKFLKDG--NTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F FG I + K G AF +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 675 FEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMPT 732
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + ++ L+ F +FG + KV+ S+ A V + +V++A+AA ++G
Sbjct: 731 PTNCVWIDGVGEKVPESFLQSQFTRFGTVTKVSIDRSKQLALVLYDQVQNAQAAVKDMRG 790
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 791 TILRGRKLQVDFA 803
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V N+S T+ DL +FG+FG + V S+ F FV F+ V+DA + +A
Sbjct: 209 NNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEA 268
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPS------KHLWVGGISQTVSKEEL 114
L G F R +K F + K + +L++ + ++ ++L
Sbjct: 269 LNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLDDSIGDDKL 328
Query: 115 EEGFLKFGNIEDFKFLKDGN-----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F +FG I K ++D N + FV +S E+A+ AL +N + + + L V +
Sbjct: 329 KELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMNSKMVVSKPLYVALAQ 388
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 389 RKEDRRARL 397
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 56/285 (19%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAK 73
+++L+VG+L + D+ L +LF + GA+ V +T S + +V + +DA A
Sbjct: 29 TTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARAL 88
Query: 74 DALQGSDFRGNPIKIEFAR-----PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFK 128
D L + G PI+I ++ + ++++ + + + + L + F FGNI K
Sbjct: 89 DVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILSCK 148
Query: 129 FLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVD-FLRSQPSRREQWPNSH 182
D + FV++ E A +A+ +NG + +Q+ V F+R Q RE N
Sbjct: 149 VATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQ--ERESTINKE 206
Query: 183 DARDGPI--IGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLH 240
+ + I G D + P +SV RDG
Sbjct: 207 KFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGK------------------- 247
Query: 241 NAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFND 285
S+ + FV F +VD+A + E L G+ F+D
Sbjct: 248 ----------------SKCFGFVNFENVDDAAMSVEALNGQKFDD 276
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 27/190 (14%)
Query: 7 KFNRAYD-DKEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFA 59
K N +Y +E + ++VG L + D L + F KFG L T S+ +
Sbjct: 114 KVNWSYTAQQENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYG 173
Query: 60 FVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKH-------------------- 99
FV F R EDA+ A + G G IK+ + SK
Sbjct: 174 FVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEINNETSSQNCT 233
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
+++G I + V ++L++ ++G+IE+ + KD AF+++S+ E A A+ NG+ I
Sbjct: 234 VYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIIN 293
Query: 160 GEQLRVDFLR 169
G LR + R
Sbjct: 294 GSTLRCSWGR 303
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 40/238 (16%)
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKH----LWVGGISQTVSKEE 113
+ FV F A+ AKD + G G +K+ ++ A+ ++VGG+ V+ +
Sbjct: 85 YGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWSYTAQQENQGNYKIFVGGLQPEVNDDL 144
Query: 114 LEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
L + F KFG + D + LK T FV + R EDA A++ +NG ++ G ++V++
Sbjct: 145 LYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNW 204
Query: 168 LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
+ S + + + P KRS+ + + N + +++G
Sbjct: 205 VTSNIASKTEQP------------------------KRSYDEIN---NETSSQNCTVYIG 237
Query: 228 -YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFN 284
P +V+ D+ L + +G IE ++ + Y+F++F + A A G++ N
Sbjct: 238 NIPKNVESDD--LKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIIN 293
>gi|301624826|ref|XP_002941699.1| PREDICTED: polyadenylate-binding protein 4-like [Xenopus (Silurana)
tropicalis]
Length = 632
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKE F K+G V + S+ F FV F+R EDA A D
Sbjct: 197 TNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDD 256
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G D G + + E + + S++ L++ + T+ E+L
Sbjct: 257 MNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 316
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 317 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 376
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 377 KEERKAHLTNQYMQR 391
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 116/300 (38%), Gaps = 66/300 (22%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F++ D +
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADGEYG 68
Query: 73 KDALQGSDFR-----GNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKF 121
D G + + PS ++++ + +++ + L + F F
Sbjct: 69 NLLFDRMDVCFHVAGGKAFTLLWFSERDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 128
Query: 122 GNIEDFKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQ 177
GNI K + D N AFV + + A A++ +NG + ++ V + RRE
Sbjct: 129 GNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFK---CRRE- 184
Query: 178 WPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQ 237
R+ + + F++ Y ++ + MD++
Sbjct: 185 -------REAELGAKAKEFTN---VYIKNFGED-----------------------MDDE 211
Query: 238 MLHNAMILFGEIERIK-----SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
L +G+ +K S S+ + FV F ++A +A + + G+ N IMF
Sbjct: 212 RLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDDMNGKDVNG---KIMF 268
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 59/301 (19%)
Query: 20 SSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAAK 73
++NL+VGNL A L ELF FG +D T S+ + FV + A A
Sbjct: 296 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 355
Query: 74 DALQGSDFRGNPIKIEFA-------RPAKPSKH-----LWVGGISQTVSKEELEEGFLKF 121
+ G G +++ A +PSK L+V +S +++ + L FL F
Sbjct: 356 KRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPF 415
Query: 122 GNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRR 175
G + + K KD T FV+YS AAEA+ ++NGR + G ++ V + PS
Sbjct: 416 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVR-VSGIPS-- 472
Query: 176 EQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMD 235
PNS A + P R D + Y + P S +D
Sbjct: 473 -TLPNS--AVESPSTTRTVKEIDMSNLYVCNMPSS-----------------------ID 506
Query: 236 EQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRIT 289
+ L + FG+I + ++ ++ Y F++F + A +A + G L I
Sbjct: 507 TKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMII 566
Query: 290 I 290
+
Sbjct: 567 V 567
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 113/301 (37%), Gaps = 68/301 (22%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKD 74
+ L+V NLS L LF FG + TT S+ + FV + A A
Sbjct: 392 AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVI 451
Query: 75 ALQGSDFRGNPIKIEFA-----------------RPAKP--SKHLWVGGISQTVSKEELE 115
L G G I++ + R K +L+V + ++ ++L
Sbjct: 452 HLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLV 511
Query: 116 EGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
E FL FG I + + D +T F++++ E A +A+ +NG +GGE
Sbjct: 512 ELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEM------- 564
Query: 170 SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYP 229
II R G S + S S+V +D S++ P
Sbjct: 565 -------------------IIVRVAGLSPSASI-------SAVQTTQDINKSRLYITNLP 598
Query: 230 PSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRIT 289
S+ D+ + N FG+I ++ + YS V + A +A + + G + R+
Sbjct: 599 RSMTADKMV--NLFAPFGQITKV--LMNLEYSLVWYADAPSAIKAVQHMDGYMVEGKRLV 654
Query: 290 I 290
+
Sbjct: 655 V 655
Score = 47.0 bits (110), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 27/179 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
+NL+VG + + T+ +LF FG + + + + + V F A AA D L G
Sbjct: 679 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQ 738
Query: 81 FRGNPIKIEFA-RPAKPS--------------------KHLWVGGISQTVSKEELEEGFL 119
G+ + + A PA+ + +L+V + V+ E L + FL
Sbjct: 739 IGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFL 798
Query: 120 KFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
G I K + + T FV+++ AA AL ++NG + G L V P
Sbjct: 799 PCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 857
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
S L++ NL T + LF FG + KV + ++ V++ A A + G
Sbjct: 590 SRLYITNLPRSMTADKMVNLFAPFGQITKVLM--NLEYSLVWYADAPSAIKAVQHMDGYM 647
Query: 81 FRGNPIKIEFARPA---------KPSK-----HLWVGGISQTVSKEELEEGFLKFGNIED 126
G + ++ + KP K +L+VG + ++++++ + F FG +
Sbjct: 648 VEGKRLVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQ 707
Query: 127 FKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
+ + V + AA A+ +++G QIGG L V
Sbjct: 708 ARMFRFQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAV 746
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 38/198 (19%)
Query: 13 DDKEAPPS-SNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKR 65
+++E PP + L+VGNL A L +LF +FG ++ V T SR FAFV
Sbjct: 85 NEEELPPRRTKLYVGNLPRSCDIAQLTQLFQEFGTVESVEVVRNEETGISRGFAFVTMST 144
Query: 66 VEDAKAAKDALQGSDFRGNPIKIEFARPAKP-SK-------------HLWVGGISQTVSK 111
V++AK+A + LQGSD G + + F PAK SK L+VG ++ +V K
Sbjct: 145 VKEAKSAIEKLQGSDLGGRDMIVNF--PAKVLSKKKETDDSYIETPYQLFVGNLAWSVKK 202
Query: 112 EELEEGFLKFGNIEDFKFLKDGN------TAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
E L+ F + GN+ K + G FV S + +A+ +++G++ G L+V
Sbjct: 203 EILKSLFSQHGNVSAAKVIYSGKGGVPRAFGFVCLSSQSEMEDAIVSLHGKEFHGRNLKV 262
Query: 166 DFLRSQPSRREQWPNSHD 183
R+ P S D
Sbjct: 263 ---------RQARPTSKD 271
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 76/198 (38%), Gaps = 45/198 (22%)
Query: 13 DDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSS------RSFAFVYFKRV 66
DD L+VGNL+ LK LF + G + S R+F FV
Sbjct: 181 DDSYIETPYQLFVGNLAWSVKKEILKSLFSQHGNVSAAKVIYSGKGGVPRAFGFVCLSSQ 240
Query: 67 EDAKAAKDALQGSDFRGNPIKIEFARP--------------AKPSKH------------- 99
+ + A +L G +F G +K+ ARP AKPS
Sbjct: 241 SEMEDAIVSLHGKEFHGRNLKVRQARPTSKDMVVSDVEENIAKPSTMVEDSMTETVKATF 300
Query: 100 ------LWVGGISQTVSKEELEEGFLKFGNIEDFKFL---KDGNT---AFVEYSRLEDAA 147
++V +S +V + L E F + GN+ D + L K G + FV +S +
Sbjct: 301 VGSAYGVYVSNLSLSVKNKALSELFSQHGNVLDARVLYARKAGRSRPYGFVNFSSQAEVE 360
Query: 148 EALKNINGRQIGGEQLRV 165
A+ ++ ++ +L V
Sbjct: 361 AAIAALDKKEFYERKLVV 378
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 27/190 (14%)
Query: 7 KFNRAYD-DKEAPPSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFA 59
K N +Y +E + ++VG L + D L + F KFG L T S+ +
Sbjct: 114 KVNWSYTAQQENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYG 173
Query: 60 FVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKH-------------------- 99
FV F R EDA+ A + G G IK+ + SK
Sbjct: 174 FVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEINNETSSQNCT 233
Query: 100 LWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIG 159
+++G I + V ++L++ ++G+IE+ + KD AF+++S+ E A A+ NG+ I
Sbjct: 234 VYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIIN 293
Query: 160 GEQLRVDFLR 169
G LR + R
Sbjct: 294 GSTLRCSWGR 303
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 40/238 (16%)
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKH----LWVGGISQTVSKEE 113
+ FV F A+ AKD + G G +K+ ++ A+ ++VGG+ V+ +
Sbjct: 85 YGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWSYTAQQENQGNYKIFVGGLQPEVNDDL 144
Query: 114 LEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
L + F KFG + D + LK T FV + R EDA A++ +NG ++ G ++V++
Sbjct: 145 LYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNW 204
Query: 168 LRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVG 227
+ S + + + P KRS+ + + N + +++G
Sbjct: 205 VTSNIASKTEQP------------------------KRSYDEIN---NETSSQNCTVYIG 237
Query: 228 -YPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFN 284
P +V+ D+ L + +G IE ++ + Y+F++F + A A G++ N
Sbjct: 238 NIPKNVESDD--LKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIIN 293
>gi|336364881|gb|EGN93234.1| hypothetical protein SERLA73DRAFT_163561 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1420
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 88/222 (39%), Gaps = 57/222 (25%)
Query: 5 PSKFNRAYDDK-EAP------PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS 57
P NRA K E P P+ +LW+GNL + T L +F +GA++ + +
Sbjct: 559 PGSQNRAVSPKNEGPNSQIQTPTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKE 618
Query: 58 FAFVYFKRVEDAKAAKDALQ---GSDF---RGNPIKIEFAR-------PAK--------- 95
FV F DA AKD + G + G ++I F + PAK
Sbjct: 619 CGFVNFVDQGDAIRAKDDVLNRLGGNIGMPNGQTVRIGFGKADSAPVAPAKGTTVTSPGT 678
Query: 96 -------------------------PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
P++ LW+G I T + + F +G IE + L
Sbjct: 679 TSPSGATGKSTSPGLGGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVL 738
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQ---LRVDFLR 169
N F+ + RL+DA A K +NGR + G +R+ F +
Sbjct: 739 THKNCGFINFERLDDAVRARKALNGRDVLGSDVGAIRIGFAK 780
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 13/192 (6%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + V+ E+L F +G IE + L + FV + DA A ++
Sbjct: 580 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQGDAIRAKDDVLN 639
Query: 156 RQIG------GEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
R G G+ +R+ F + + P + A+ + GT + S
Sbjct: 640 RLGGNIGMPNGQTVRIGF-----GKADSAPVA-PAKGTTVTSPGTTSPSGATGKSTSPGL 693
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
+ P++ LW+G PS +L + +G IE + +N F+ F +D
Sbjct: 694 GGMDAQLQSTPTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFINFERLD 752
Query: 270 EARRAKEGLQGR 281
+A RA++ L GR
Sbjct: 753 DAVRARKALNGR 764
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 701 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 760
Query: 76 LQGSDFRGN---PIKIEFARPAKPSKHLWVGGISQTVSKEELEEGF--LKFG-NIEDFKF 129
L G D G+ I+I FA+ P K+ GG Q S +G L G I +
Sbjct: 761 LNGRDVLGSDVGAIRIGFAK--VPVKNGQEGGAGQDESPSVAVQGVGDLSVGATIHALRS 818
Query: 130 LKDGNT 135
+K +T
Sbjct: 819 VKGAST 824
>gi|198476754|ref|XP_002132435.1| GA25187 [Drosophila pseudoobscura pseudoobscura]
gi|198137837|gb|EDY69837.1| GA25187 [Drosophila pseudoobscura pseudoobscura]
Length = 858
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 14 DKEAPPSS-NLWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAK 70
D+ P S+ L++GNL + T ++L+ F FG + ++ ++AF + +
Sbjct: 445 DEYHPKSTRTLFIGNLEKEITASELRVHFESFGEIIEIDIKKQGLNAYAFCQYSDIVSVV 504
Query: 71 AAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
A + G N IK+ F + + P+ +W+ G+ + VS+ L+ F +FG +
Sbjct: 505 KAMRKMDGEHLGSNRIKLGFGK-SMPTNCVWIDGVGEKVSESFLQSQFTRFGAVTKVSID 563
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ A V Y ++++A A+K++ G + G +L+VDF
Sbjct: 564 RQRQLALVLYDQVQNAQAAVKDMRGTIMRGRKLQVDF 600
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 29/179 (16%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT +S +A V FK+ +D + A +
Sbjct: 353 IRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS 412
Query: 77 QGSDFRGNPIKIE-----------FARPA---------KPSKHLWVGGISQTVSKEELEE 116
F G I++E F RP K ++ L++G + + ++ EL
Sbjct: 413 HDKHFFGCKIEVEPYQGYDVEDNEF-RPYEAELDEYHPKSTRTLFIGNLEKEITASELRV 471
Query: 117 GFLKFGNIEDFKFLKDG--NTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
F FG I + K G AF +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 472 HFESFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMPT 530
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 45/73 (61%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ + +++ L+ F +FGA+ KV+ R A V + +V++A+AA ++G
Sbjct: 529 PTNCVWIDGVGEKVSESFLQSQFTRFGAVTKVSIDRQRQLALVLYDQVQNAQAAVKDMRG 588
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 589 TIMRGRKLQVDFA 601
>gi|393909854|gb|EJD75619.1| transformer-2b6, variant [Loa loa]
Length = 442
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 17/111 (15%)
Query: 12 YDDK--------EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRS 57
YDD+ E PS L V LS TT+ DLKELF ++G LD V T SR
Sbjct: 252 YDDRRYTFSRRDEPEPSRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRG 311
Query: 58 FAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFA---RPAKPSKHLWVGGI 105
F FVYFK++EDA AK+ + G++ G+ I+I+++ RP P+ +++G +
Sbjct: 312 FGFVYFKKIEDAIEAKERVAGTEIDGHKIRIDYSITKRPHTPTPGIYMGAV 362
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 95 KPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTA------FVEYSRLEDAAE 148
+PS+ L V G+S ++ +L+E F ++G++++ + + D T FV + ++EDA E
Sbjct: 266 EPSRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIE 325
Query: 149 ALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNH---SAYKR 205
A + + G +I G ++R+D+ ++R P P I G S +Y+R
Sbjct: 326 AKERVAGTEIDGHKIRIDY---SITKRPHTPT-------PGIYMGAVDSRRRGPPRSYRR 375
Query: 206 S-HPQSSVGRNRDGPPSK 222
S P S R RD PP++
Sbjct: 376 SPSPYRSYRRYRDSPPNR 393
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK+LFGKFG V + S+ F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + +G + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ F+ SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV---FVGRFKSRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K L+ + P++ +
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDERLKDLFGKFGPALSV-------- 220
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITI 290
++ +S S+ + FV F ++A++A + + G+ N +I +
Sbjct: 221 -----KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ + FV+F+ E A+ A + +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + + E L++ F KFG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K + D + FV + R EDA +A+ +NG+++ G+Q+ V + + R+ +
Sbjct: 220 VKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + V DG +D++ L
Sbjct: 280 FEQMKQDRITRYQGVN------------LYVKNLDDG---------------IDDERLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|351710883|gb|EHB13802.1| RNA-binding protein 14 [Heterocephalus glaber]
Length = 669
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 22 NLWVGNL-SADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSD 80
++VGN+ ADTT +L LF +G + + FAFV+ + A A +AL G +
Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVM--KQFAFVHMRENAGALRAIEALHGHE 59
Query: 81 FR-GNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAF 137
R G + +E +RP +P + ++VG +S + +EL F + G + + +KD AF
Sbjct: 60 LRPGRALVVEMSRP-RPMNTWKIFVGDVSAACTSQELRSLFERRGRVIECDVVKD--YAF 116
Query: 138 VEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
V + DA A+ +NG+++ G+++ V+
Sbjct: 117 VHMEKEADAKAAIAQLNGKEVKGKRINVEL 146
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
++VG++SA T +L+ LF + G + + + +AFV+ ++ DAKAA L G +
Sbjct: 80 KIFVGDVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 82 RGNPIKIEFA 91
+G I +E +
Sbjct: 138 KGKRINVELS 147
>gi|336377458|gb|EGO18620.1| hypothetical protein SERLADRAFT_418814 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1383
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 88/222 (39%), Gaps = 57/222 (25%)
Query: 5 PSKFNRAYDDK-EAP------PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS 57
P NRA K E P P+ +LW+GNL + T L +F +GA++ + +
Sbjct: 559 PGSQNRAVSPKNEGPNSQIQTPTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKE 618
Query: 58 FAFVYFKRVEDAKAAKDALQ---GSDF---RGNPIKIEFAR-------PAK--------- 95
FV F DA AKD + G + G ++I F + PAK
Sbjct: 619 CGFVNFVDQGDAIRAKDDVLNRLGGNIGMPNGQTVRIGFGKADSAPVAPAKGTTVTSPGT 678
Query: 96 -------------------------PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFL 130
P++ LW+G I T + + F +G IE + L
Sbjct: 679 TSPSGATGKSTSPGLGGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVL 738
Query: 131 KDGNTAFVEYSRLEDAAEALKNINGRQIGGEQ---LRVDFLR 169
N F+ + RL+DA A K +NGR + G +R+ F +
Sbjct: 739 THKNCGFINFERLDDAVRARKALNGRDVLGSDVGAIRIGFAK 780
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 13/192 (6%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + V+ E+L F +G IE + L + FV + DA A ++
Sbjct: 580 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQGDAIRAKDDVLN 639
Query: 156 RQIG------GEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQ 209
R G G+ +R+ F + + P + A+ + GT + S
Sbjct: 640 RLGGNIGMPNGQTVRIGF-----GKADSAPVA-PAKGTTVTSPGTTSPSGATGKSTSPGL 693
Query: 210 SSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVD 269
+ P++ LW+G PS +L + +G IE + +N F+ F +D
Sbjct: 694 GGMDAQLQSTPTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFINFERLD 752
Query: 270 EARRAKEGLQGR 281
+A RA++ L GR
Sbjct: 753 DAVRARKALNGR 764
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 701 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 760
Query: 76 LQGSDFRGN---PIKIEFARPAKPSKHLWVGGISQTVSKEELEEGF--LKFG-NIEDFKF 129
L G D G+ I+I FA+ P K+ GG Q S +G L G I +
Sbjct: 761 LNGRDVLGSDVGAIRIGFAK--VPVKNGQEGGAGQDESPSVAVQGVGDLSVGATIHALRS 818
Query: 130 LKDGNT 135
+K +T
Sbjct: 819 VKGAST 824
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N + D +LKELF +FG V S+ F FV +++ EDA A +
Sbjct: 191 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G + G I K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
F FG+I K L+DG + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L +D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVMKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + E A +A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 110/285 (38%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ +AFV+F+ E A A + +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + V L+E F +FG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 219
Query: 127 FKFLKDGNT-----AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K ++D + FV Y + EDA +A++ +NG+++ G+ + V + + R+ +
Sbjct: 220 VKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + L++ +D++ L
Sbjct: 280 FEQLKQERISRYQGVN--------------------------LYIKNLDDT-IDDEKLRR 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LK++F K+G + + SR F FV F+R EDA+ A D
Sbjct: 191 TNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQRAVDE 250
Query: 76 LQGSDFRGNPIKI-----------EFARPAKPSK----------HLWVGGISQTVSKEEL 114
+ G + G I + E R + K +L+V + + E L
Sbjct: 251 MNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERL 310
Query: 115 EEGFLKFGNIEDFKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG I K + DG + FV +S E+A +A+ +NGR + + L V +
Sbjct: 311 RKEFSPFGTITSAKVMMDGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERQAHLTNQYMQR 385
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 49/327 (14%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F GA+ + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G P++I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGRPVRIMWSQ-RDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGNTA----FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSH 182
K + D N + FV + E A A++ +NG + ++ V + SR+E
Sbjct: 128 CKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK---SRKE------ 178
Query: 183 DARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNA 242
R+ + R F++ + + G + D K ++ Y NA
Sbjct: 179 --REAELGARAKEFTNVYI--------KNFGEDMDDDKLKDIFSKY-----------GNA 217
Query: 243 MILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKD 302
M + + ++ SR + FV F ++A+RA + + G+ N I + + ++ +
Sbjct: 218 MSI--RVMTDENGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKKVERQTE 275
Query: 303 YPGSYSGTKGPRSEMFFGDQIRPSQLD 329
+ K R + G + LD
Sbjct: 276 LKRKFEQMKQDRMTRYQGVNLYVKNLD 302
>gi|392896831|ref|NP_001255142.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
gi|3874499|emb|CAB07322.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
Length = 309
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTY------SSRSFAFVY 62
N+ YD + PS L V NLS+ TT+ DL+++FG+FG ++K +SR F F+Y
Sbjct: 64 NQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIY 123
Query: 63 FKRVEDAKAAKDALQGSDFRGNPIKIEFA 91
F +EDA AA+D L +D G+ I+++F+
Sbjct: 124 FNLIEDATAARDKLCNTDLDGHKIRVDFS 152
>gi|45595611|gb|AAH67187.1| Rbm4.2 protein [Danio rerio]
Length = 384
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
+++GNLS +T DL+ LF +FG + + +++ FV+ ++A+AA L +
Sbjct: 3 KIFIGNLSPTSTADDLRSLFSEFGIVKECDVL--KNYGFVHMDSKKEAEAAIRKLHHYEL 60
Query: 82 RGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+G I +E ++ KP S L V IS + +EL F ++G + + +KD AFV
Sbjct: 61 KGQAINVELSK-GKPRGSTKLHVSNISSGCTNQELRAKFEEYGPVVECDIVKD--YAFVH 117
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQP 172
R++DA EA+ + G+ ++V LR+ P
Sbjct: 118 MERMDDAMEAISGLENTTFQGKLIKVQLSTSRLRTAP 154
>gi|41054431|ref|NP_955971.1| RNA binding motif protein 4 like [Danio rerio]
gi|27881945|gb|AAH44503.1| RNA binding motif protein 4.2 [Danio rerio]
gi|157423277|gb|AAI53458.1| Rbm4.2 protein [Danio rerio]
gi|182890716|gb|AAI65179.1| Rbm4.2 protein [Danio rerio]
Length = 385
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQGSDF 81
+++GNLS +T DL+ LF +FG + + +++ FV+ ++A+AA L +
Sbjct: 3 KIFIGNLSPTSTADDLRSLFSEFGIVKECDVL--KNYGFVHMDSKKEAEAAIRKLHHYEL 60
Query: 82 RGNPIKIEFARPAKP--SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
+G I +E ++ KP S L V IS + +EL F ++G + + +KD AFV
Sbjct: 61 KGQAINVELSK-GKPRGSTKLHVSNISSGCTNQELRAKFEEYGPVVECDIVKD--YAFVH 117
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQP 172
R++DA EA+ + G+ ++V LR+ P
Sbjct: 118 MERMDDAMEAISGLENTTFQGKLIKVQLSTSRLRTAP 154
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTYS-----SRSFAFVYFKRVEDAKAAKDA 75
+N+++ N D D LKE+F K+G V + SR F FV +++ EDA A +
Sbjct: 191 TNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKSRGFGFVSYEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G++ G + K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L++G + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L D T+A L E F G + T S +A+V F + DA+ A
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVVKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSR 174
K + D N AFV + + A A++ +NG + ++ V +S+ R
Sbjct: 128 CKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER 179
>gi|403301169|ref|XP_003941271.1| PREDICTED: RNA-binding protein 4B [Saimiri boliviensis boliviensis]
Length = 359
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 23/195 (11%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA---LQGS 79
L++GNL + T+ +++ LF ++G + + +++ FV+ +ED AA+DA L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVH---IEDKTAAEDAIRNLHHY 58
Query: 80 DFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G I +E ++ +K S L VG IS T + +EL F ++G + + +KD AFV
Sbjct: 59 KLHGVNINVEASKNKSKASTKLHVGNISPTCTNQELRTKFEEYGPVIECDIVKD--YAFV 116
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ------WPNSHDARDGP 188
R EDA EA++ ++ + G+++ V LR+ P +Q H +++ P
Sbjct: 117 HMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCGKEGHWSKECP 176
Query: 189 I--IGRGTGFSDNHS 201
+ GR F++ ++
Sbjct: 177 VDRTGRVADFTEQYN 191
>gi|340367697|ref|XP_003382390.1| PREDICTED: hypothetical protein LOC100636101 [Amphimedon
queenslandica]
Length = 1557
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS---SRSFAFVYFKRVEDAKAAKDALQG 78
+L+VGN+ + + DL+++F ++G + V + ++ FV F + A AK A+ G
Sbjct: 281 SLFVGNIHKNVSIYDLRDVFQRYGHILDVEIKKMSGNATYGFVLFFNLLSAINAKKAMDG 340
Query: 79 SDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
+ N I++ F + PSK LW+ GI ++++ +++ F K+G + + TA V
Sbjct: 341 AQLGRNRIRVGFGK-GTPSKVLWIDGIDASLNETQVKSHFSKYGTVVRIGIDRSTYTAMV 399
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRV--DF 167
++ ++++A +AL ++ G I ++ DF
Sbjct: 400 QFDKVDEAKDALSSVKGSFICNTHSKIMADF 430
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 54/199 (27%)
Query: 97 SKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK-DGNTA--FVEYSRLEDAAEALKNI 153
++ L+VG I + VS +L + F ++G+I D + K GN FV + L A A K +
Sbjct: 279 TRSLFVGNIHKNVSIYDLRDVFQRYGHILDVEIKKMSGNATYGFVLFFNLLSAINAKKAM 338
Query: 154 NGRQIGGEQLRVDFLRSQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSHPQSSVG 213
+G Q+G ++RV F G+GT
Sbjct: 339 DGAQLGRNRIRVGF-----------------------GKGT------------------- 356
Query: 214 RNRDGPPSKILWV-GYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEAR 272
PSK+LW+ G S ++E + + +G + RI S + V+F VDEA+
Sbjct: 357 ------PSKVLWIDGIDAS--LNETQVKSHFSKYGTVVRIGIDRSTYTAMVQFDKVDEAK 408
Query: 273 RAKEGLQGRLFNDPRITIM 291
A ++G + IM
Sbjct: 409 DALSSVKGSFICNTHSKIM 427
Score = 40.8 bits (94), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
PS LW+ + A + +K F K+G + ++ S A V F +V++AK A +++G
Sbjct: 357 PSKVLWIDGIDASLNETQVKSHFSKYGTVVRIGIDRSTYTAMVQFDKVDEAKDALSSVKG 416
Query: 79 S 79
S
Sbjct: 417 S 417
>gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phyllitidis]
Length = 472
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N++V NL+ +TTD DL E+FG FG + +S+ F FV FK +DA A +
Sbjct: 30 NNVFVKNLAEETTDEDLMEVFGGFGPISSAVVMRDANGNSKCFGFVNFKNADDAAKAVEN 89
Query: 76 LQGSDF---------------RGNPIKIEFARPAKPSK------HLWVGGISQTVSKEEL 114
+ G F R +K++F + K +L++ + ++ E+L
Sbjct: 90 INGKVFNDKEWYVGRAQKKSEREAELKVKFEQLRKERTEKFQGVNLYLKNVDDSIDDEKL 149
Query: 115 EEGFLKFGNIEDFKFLKD-----GNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLR 169
+E F FG + K ++ + FV S ++A A+ +NG+ +G + L V +
Sbjct: 150 KELFSGFGTVNSCKIMRSPQGQIVGSGFVALSSKDEAMRAVNEMNGKMVGSKPLYVAVAQ 209
Query: 170 SQPSRREQW 178
+ RR +
Sbjct: 210 RKDERRAKL 218
Score = 40.4 bits (93), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 89 EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT-----AFVEYSRL 143
E A +++V +++ + E+L E F FG I ++D N FV +
Sbjct: 21 ELTNAATKFNNVFVKNLAEETTDEDLMEVFGGFGPISSAVVMRDANGNSKCFGFVNFKNA 80
Query: 144 EDAAEALKNINGR 156
+DAA+A++NING+
Sbjct: 81 DDAAKAVENINGK 93
>gi|260841489|ref|XP_002613946.1| hypothetical protein BRAFLDRAFT_67491 [Branchiostoma floridae]
gi|229299336|gb|EEN69955.1| hypothetical protein BRAFLDRAFT_67491 [Branchiostoma floridae]
Length = 4101
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 30/191 (15%)
Query: 12 YDDKEAPPSSNLWVGNLSADTTDADLKE-LFGKFGALDKVTTYS-----SRSFAFVYFKR 65
Y+ E P S L V NL ++D LK+ LF +F KVT+ + V+F+R
Sbjct: 303 YEKLEEPRSYGLCVRNLPVRSSDTSLKDGLFHEFKKHGKVTSVRVVGLGEDRYGLVFFRR 362
Query: 66 VEDAKAAKDALQGSDFRGNPIKIEF-----------ARPA---------KPSKHLWVGGI 105
ED A DA +G F G +++ RP K ++ L++G +
Sbjct: 363 TEDRDKAMDASKGKLFFGAQMELSIWDGPEEEREGDLRPKEELFDEYHPKATRTLFIGNL 422
Query: 106 SQTVSKEELEEGFLKFGNIEDFKFLK--DGNT--AFVEYSRLEDAAEALKNINGRQIGGE 161
++ S ++ F KFG+I D K GN+ AF++Y + +A++ ++G +G
Sbjct: 423 EKSTSYSDIRSAFEKFGDIVDIDIKKQPSGNSTYAFLQYMDITSVVKAMRKMDGEFLGKS 482
Query: 162 QLRVDFLRSQP 172
+L++ F +S P
Sbjct: 483 RLKLGFGKSMP 493
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 12 YDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRS----FAFVYFKRVE 67
+D+ + L++GNL T+ +D++ F KFG + + S +AF+ + +
Sbjct: 406 FDEYHPKATRTLFIGNLEKSTSYSDIRSAFEKFGDIVDIDIKKQPSGNSTYAFLQYMDIT 465
Query: 68 DAKAAKDALQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDF 127
A + G + +K+ F + + P +W+ G+ +++++++L + + G I +
Sbjct: 466 SVVKAMRKMDGEFLGKSRLKLGFGK-SMPCNVVWLCGMLESMTEQQLGRHYSRHGTINNI 524
Query: 128 KFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ + + + E A A+ R G +L+VDF
Sbjct: 525 VVDRQRSACLLFFEDTEAAQSAVGEAKARPFMGRRLKVDF 564
>gi|13899354|ref|NP_113680.1| RNA-binding protein 4B [Homo sapiens]
gi|109105261|ref|XP_001109453.1| PREDICTED: RNA-binding protein 4B-like [Macaca mulatta]
gi|114638751|ref|XP_508578.2| PREDICTED: RNA-binding protein 4B isoform 2 [Pan troglodytes]
gi|297688065|ref|XP_002821512.1| PREDICTED: RNA-binding protein 4B [Pongo abelii]
gi|397517079|ref|XP_003828747.1| PREDICTED: RNA-binding protein 4B [Pan paniscus]
gi|402892714|ref|XP_003909554.1| PREDICTED: RNA-binding protein 4B [Papio anubis]
gi|426369353|ref|XP_004051657.1| PREDICTED: RNA-binding protein 4B isoform 1 [Gorilla gorilla
gorilla]
gi|62511129|sp|Q9BQ04.1|RBM4B_HUMAN RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|13097558|gb|AAH03503.1| RNA binding motif protein 4B [Homo sapiens]
gi|13436323|gb|AAH04951.1| RNA binding motif protein 4B [Homo sapiens]
gi|119594964|gb|EAW74558.1| RNA binding motif protein 4B [Homo sapiens]
gi|193787792|dbj|BAG52995.1| unnamed protein product [Homo sapiens]
gi|208967358|dbj|BAG73693.1| RNA binding motif protein 4B [synthetic construct]
gi|325464201|gb|ADZ15871.1| RNA binding motif protein 4B [synthetic construct]
gi|355566265|gb|EHH22644.1| RNA-binding motif protein 4B [Macaca mulatta]
gi|355751922|gb|EHH56042.1| RNA-binding motif protein 4B [Macaca fascicularis]
Length = 359
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 23/195 (11%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA---LQGS 79
L++GNL + T+ +++ LF ++G + + +++ FV+ +ED AA+DA L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVH---IEDKTAAEDAIRNLHHY 58
Query: 80 DFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G I +E ++ +K S L VG IS T + +EL F ++G + + +KD AFV
Sbjct: 59 KLHGVNINVEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD--YAFV 116
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ------WPNSHDARDGP 188
R EDA EA++ ++ + G+++ V LR+ P +Q H +++ P
Sbjct: 117 HMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCGKEGHWSKECP 176
Query: 189 I--IGRGTGFSDNHS 201
+ GR F++ ++
Sbjct: 177 VDRTGRVADFTEQYN 191
>gi|332249630|ref|XP_003273961.1| PREDICTED: RNA-binding protein 4B isoform 1 [Nomascus leucogenys]
Length = 359
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 23/195 (11%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA---LQGS 79
L++GNL + T+ +++ LF ++G + + +++ FV+ +ED AA+DA L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--KNYGFVH---IEDKTAAEDAIRNLHHY 58
Query: 80 DFRGNPIKIEFAR-PAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFV 138
G I +E ++ +K S L VG IS T + +EL F ++G + + +KD AFV
Sbjct: 59 KLHGVNINVEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD--YAFV 116
Query: 139 EYSRLEDAAEALKNINGRQIGGEQLRVDF----LRSQPSRREQ------WPNSHDARDGP 188
R EDA EA++ ++ + G+++ V LR+ P +Q H +++ P
Sbjct: 117 HMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCGKEGHWSKECP 176
Query: 189 I--IGRGTGFSDNHS 201
+ GR F++ ++
Sbjct: 177 VDRTGRVADFTEQYN 191
>gi|157123183|ref|XP_001660048.1| hypothetical protein AaeL_AAEL009430 [Aedes aegypti]
gi|108874487|gb|EAT38712.1| AAEL009430-PA [Aedes aegypti]
Length = 5301
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTYSS--RSFAFVYFKRVEDAKAAKDALQGSD 80
L++GNL D T ++L++ F FG + ++ ++AF + + A + G
Sbjct: 817 LFIGNLEKDITASELRKHFDCFGEIIEIDIKKQGVSAYAFCQYSDIISVVKAMRKMDGEH 876
Query: 81 FRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEY 140
N IK+ F + + P+ +W+ GI+ V + L F +FG + ++ A V +
Sbjct: 877 LGSNRIKLGFGK-SMPTNCVWIDGIADAVGEGYLRSQFDRFGAVSQVTIDRERKLALVFF 935
Query: 141 SRLEDAAEALKNINGRQIGGEQLRVDF 167
+++ A A+K + G + G +L+VDF
Sbjct: 936 EQVQCAQTAVKEMRGATLRGRKLQVDF 962
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 31/180 (17%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT S+ +A V FK+ ED + A +
Sbjct: 715 ICVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQSTDRYALVCFKKPEDVEKALEVS 774
Query: 77 QGSDFRGNPIKIEFA------------RP---------AKPSKHLWVGGISQTVSKEELE 115
F G KIE A RP K ++ L++G + + ++ EL
Sbjct: 775 HDKLFFG--CKIEVAPYQGYDVDDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITASELR 832
Query: 116 EGFLKFGNIEDFKFLKDGNTA--FVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPS 173
+ F FG I + K G +A F +YS + +A++ ++G +G ++++ F +S P+
Sbjct: 833 KHFDCFGEIIEIDIKKQGVSAYAFCQYSDIISVVKAMRKMDGEHLGSNRIKLGFGKSMPT 892
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 44/73 (60%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P++ +W+ ++ + L+ F +FGA+ +VT R A V+F++V+ A+ A ++G
Sbjct: 891 PTNCVWIDGIADAVGEGYLRSQFDRFGAVSQVTIDRERKLALVFFEQVQCAQTAVKEMRG 950
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 951 ATLRGRKLQVDFA 963
>gi|356503232|ref|XP_003520415.1| PREDICTED: uncharacterized protein LOC100779340 [Glycine max]
Length = 816
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 122/280 (43%), Gaps = 61/280 (21%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVT------TYSSRSFAFVYFKRVEDAKAAKDA 75
++VG L D T++DL++ FG+ G + +V T ++ FAF+ F+ VE AK A
Sbjct: 233 EVFVGGLDKDATESDLRKAFGEVGVVTEVRLMMNPQTKKNKGFAFLRFETVEQAKRAVAE 292
Query: 76 LQGSDFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFG--NIEDFKFLKDG 133
L+ G + P++ S L++G I +T +KE L+E +G N+ED ++D
Sbjct: 293 LKNPVINGKQCGVT---PSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDLTLVEDT 349
Query: 134 NT-------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDARD 186
N AF+E+ +A +A K + R V F +P++ + D D
Sbjct: 350 NDEGKNRGFAFLEFPSRSEAMDAFKRLQRRD-------VVFGVDKPAKVSFADSFIDPGD 402
Query: 187 GPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILF 246
+ T F D PPS DE + + + +
Sbjct: 403 EIMAQVKTVFID----------------------------ALPPS--WDEDYVRDLLRKY 432
Query: 247 GEIERI---KSYPS---RNYSFVEFRSVDEARRAKEGLQG 280
GEIE+I ++ P+ ++Y FV F S D A + + + G
Sbjct: 433 GEIEKIELARNMPAARRKDYGFVTFGSHDAAVKCADSITG 472
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 21 SNLWVGNLSADTTDADLKELFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDA 75
+N+++ N + D +LKELF +FG V S+ F FV +++ EDA A +
Sbjct: 191 TNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 250
Query: 76 LQGSDFRGNPI-----------------KIEFARPAKPSKH----LWVGGISQTVSKEEL 114
+ G + G I K E + + S++ L++ + T+ E+L
Sbjct: 251 MNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 115 EEGFLKFGNIEDFK-FLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRS 170
+ F FG+I K L+DG + FV +S E+A +A+ +NGR +G + L V +
Sbjct: 311 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Query: 171 QPSRREQWPNSHDAR 185
+ R+ N + R
Sbjct: 371 KEERKAHLTNQYMQR 385
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFG------ALDKVTTYSSRSFAFVYFKRVEDAKAA 72
P ++L+VG+L +D T+A L E F G + T S +A+V F++ DA+ A
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERA 68
Query: 73 KDALQGSDFRGNPIKIEFARPAKPS------KHLWVGGISQTVSKEELEEGFLKFGNIED 126
D + +G PI+I +++ PS ++++ + +++ + L + F FGNI
Sbjct: 69 LDTMNFDVIKGKPIRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 127 FKFLKDGN----TAFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQW 178
K + D N AFV + E A +A++ +NG + ++ V +S+ R +
Sbjct: 128 CKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 51/285 (17%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKVTTYS----SRSFAFVYFKRVEDAKAAKDALQ 77
N+++ NL + L + F FG + S+ +AFV+F+ E A A + +
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 159
Query: 78 GSDFRGNPIKI-----------EFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIED 126
G + + E AK ++++ + V E L+E F +FG
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 127 FKFLKD--GNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNS 181
K ++D G + FV Y + EDA +A++ +NG++I G+ + V + + R+ +
Sbjct: 220 VKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRK 279
Query: 182 HDARDGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHN 241
+ I R G + L++ +D++ L
Sbjct: 280 FEQLKQERISRYQGVN--------------------------LYIKNLDDT-IDDEKLRK 312
Query: 242 AMILFGEIERIKSY----PSRNYSFVEFRSVDEARRAKEGLQGRL 282
FG I K S+ + FV F S +EA +A + GR+
Sbjct: 313 EFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 38/287 (13%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L+VGNL ++ L LF + GA+ + +AFV F + A A A+
Sbjct: 10 LYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATALAAMNKR 69
Query: 80 DFRGNPIKIEFAR-PAKPSK-------HLWVGGISQTVSKEELEEGFLKFGNIEDFKFLK 131
F +K+ +A P K H++VG +S + + L+E F FG I + + ++
Sbjct: 70 SFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVR 129
Query: 132 DGNT------AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQPSRREQWPNSHDAR 185
D T AFV + + +A A+ +NG+ +G +R ++ +P H
Sbjct: 130 DPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNN 189
Query: 186 DGPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMIL 245
P + Y +S P + + G+ + D ++
Sbjct: 190 SKP---------NYEEVYNQSSPTNCT----------VYCGGFTNGITDD--LITKTFSP 228
Query: 246 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMF 292
FG I+ I+ + + Y+F++F + + A A E N + +
Sbjct: 229 FGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFW 275
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 33/177 (18%)
Query: 22 NLWVGNLSADTTDADLKELFGKFGALDKV------TTYSSRSFAFVYFKRVEDAKAAKDA 75
+++VG+LS + LKE F FG + T S+ +AFV F + +A+AA A
Sbjct: 97 HIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAA 156
Query: 76 LQGSDFRGNPIKIEFARP---------------AKPSKH------------LWVGGISQT 108
+ G I+ ++ +KP+ ++ GG +
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNG 216
Query: 109 VSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNINGRQIGGEQLRV 165
++ + + + F FG I+D + KD AF++++ E A A+++ + +I G ++
Sbjct: 217 ITDDLITKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKC 273
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 38/201 (18%)
Query: 13 DDKEAPPS-----SNLWVGNLSADTTDADLKELFGKFGALDKVTTY------SSRSFAFV 61
DD AP + S ++VGNL A L E+ + G +D V SR FAFV
Sbjct: 10 DDVAAPVAEEQLGSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFV 69
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEF---------------------ARPAKPSKHL 100
+DA+A +AL GSD G +K+ F RP L
Sbjct: 70 TMASHDDAQALINALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADRRPRDDPNKL 129
Query: 101 WVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNIN 154
+VG I + + F +G++ D K + D ++ FV ++ DA A++N++
Sbjct: 130 FVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLD 189
Query: 155 GRQIGGEQLRVDFLRSQPSRR 175
G ++ G +LRV+F +P R
Sbjct: 190 GTELDGRELRVNFAGEKPPSR 210
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 2 APPPSKFNRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-DKVTTYS-----S 55
A PP+ R DD + L+VGN+ +A + LF +G++ D Y S
Sbjct: 113 ARPPTADRRPRDD-----PNKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRS 167
Query: 56 RSFAFVYFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPSKH 99
R F FV ++V DA+ A + L G++ G +++ FA PS++
Sbjct: 168 RGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNFAGEKPPSRY 211
>gi|149020435|gb|EDL78240.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 21/165 (12%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 31 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 85
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 86 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 145
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQ 157
++G I + L D T F+ + + +A EA+K +NG++
Sbjct: 146 SQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQK 190
>gi|170087476|ref|XP_001874961.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650161|gb|EDR14402.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1160
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 52/228 (22%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDA-KAAKDALQ 77
P+ +LW+GNL + T L +F +GA++ + + FV F DA +A +D L
Sbjct: 390 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 449
Query: 78 --GSDF---RGNPIKIEFAR-------PAK------------------------------ 95
G + G ++I F + PAK
Sbjct: 450 RLGGNIGMPNGQMVRIGFGKADSAPVAPAKGNSSSPGPTSPGAGVGKSSGTNVGLGAMDA 509
Query: 96 -----PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEAL 150
P++ LW+G I T + + F +G IE + L N F+ + RL+DA A
Sbjct: 510 QLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRAR 569
Query: 151 KNINGRQIGGEQ---LRVDFLRSQPSRREQWPNSHDARDGPIIGRGTG 195
K +NGR + G +R+ F + P + Q N + +I +G G
Sbjct: 570 KALNGRDVLGSDVGAIRIGFAKV-PVKNGQESNGGPEENPNVIVQGVG 616
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 96 PSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVEYSRLEDAAEALKNING 155
P++ LW+G + V+ E+L F +G IE + L + FV + DA A +++
Sbjct: 390 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 449
Query: 156 RQIG------GEQLRVDFLR--SQPSRREQWPNSHDARDGPIIGRGTGFSDNHSAYKRSH 207
R G G+ +R+ F + S P + +S P G G N
Sbjct: 450 RLGGNIGMPNGQMVRIGFGKADSAPVAPAKGNSSSPGPTSPGAGVGKSSGTNVGL----- 504
Query: 208 PQSSVGRNRDGPPSKILWVGYPPSVQMDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRS 267
++ P++ LW+G PS +L + +G IE + +N F+ F
Sbjct: 505 --GAMDAQLQSTPTRALWIGSIPSTTTPATIL-SVFSPYGPIESARVLTHKNCGFINFER 561
Query: 268 VDEARRAKEGLQGR 281
+D+A RA++ L GR
Sbjct: 562 LDDAVRARKALNGR 575
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 16 EAPPSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDA 75
++ P+ LW+G++ + TT A + +F +G ++ + ++ F+ F+R++DA A+ A
Sbjct: 512 QSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKA 571
Query: 76 LQGSDFRGN---PIKIEFAR 92
L G D G+ I+I FA+
Sbjct: 572 LNGRDVLGSDVGAIRIGFAK 591
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 188 PIIGRGTGFSDNHSAY-------KRSHPQSSVGRNRD-GPPSKILWVGYPPSVQMDEQML 239
P +G G S SAY RS S G+N P++ LW+G S EQ++
Sbjct: 350 PSLGINVGNSSGASAYLLAPSAQTRSVSPKSEGQNSQIQTPTRSLWIGNLDSAVTSEQLI 409
Query: 240 HNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLF------NDPRITIMFS 293
H +G IE ++ P + FV F +A RAKE + RL N + I F
Sbjct: 410 H-VFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLNRLGGNIGMPNGQMVRIGFG 468
Query: 294 SSELAPGKDYPGSYSGTKGPRS 315
++ AP G+ S + GP S
Sbjct: 469 KADSAPVAPAKGN-SSSPGPTS 489
>gi|328789146|ref|XP_395705.4| PREDICTED: hypothetical protein LOC412243 [Apis mellifera]
Length = 4297
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 23 LWVGNLSADTTDADLKELFGKFGALDKVTTY---SSRSFAFVYFKRVEDAKAAKDALQGS 79
L++GNL D T ++L++ F FG + ++ + S+AF + + A ++ G
Sbjct: 470 LFIGNLEKDVTASELRKHFEPFGEIIEIDIKKQGAVSSYAFCQYSDIGSVVKAMRSMDGE 529
Query: 80 DFRGNPIKIEFARPAKPSKHLWVGGISQTVSKEELEEGFLKFGNIEDFKFLKDGNTAFVE 139
N IK+ F + + P+ +WV GI +S++ L F +FG I ++ A V
Sbjct: 530 HLGANRIKLGFGK-SMPTSCVWVDGIGDCMSEKYLNMQFHQFGPINQVVVDRERGHALVF 588
Query: 140 YSRLEDAAEALKNINGRQIGGEQLRVDF 167
+ ++ A A+K + G + G +L+VDF
Sbjct: 589 FEQISCAQAAVKEMRGTALRGRRLQVDF 616
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 23 LWVGNLSADTTDADLKE-LFGKFGALDKVTTY-----SSRSFAFVYFKRVEDAKAAKDAL 76
+ V NL A ++D LK+ LF ++ KVT + +A V FK+ ED + A +
Sbjct: 368 ICVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGAAGDRYALVCFKKPEDVEKALEVS 427
Query: 77 QGSDFRGNPIKIEFA------------RP---------AKPSKHLWVGGISQTVSKEELE 115
F G KIE A RP K ++ L++G + + V+ EL
Sbjct: 428 HDKLFFG--CKIEVAPYQGYDVEDNEFRPYEAEVDEYHPKATRTLFIGNLEKDVTASELR 485
Query: 116 EGFLKFGNIEDFKFLKDGNT---AFVEYSRLEDAAEALKNINGRQIGGEQLRVDFLRSQP 172
+ F FG I + K G AF +YS + +A+++++G +G ++++ F +S P
Sbjct: 486 KHFEPFGEIIEIDIKKQGAVSSYAFCQYSDIGSVVKAMRSMDGEHLGANRIKLGFGKSMP 545
Query: 173 S 173
+
Sbjct: 546 T 546
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%)
Query: 19 PSSNLWVGNLSADTTDADLKELFGKFGALDKVTTYSSRSFAFVYFKRVEDAKAAKDALQG 78
P+S +WV + ++ L F +FG +++V R A V+F+++ A+AA ++G
Sbjct: 545 PTSCVWVDGIGDCMSEKYLNMQFHQFGPINQVVVDRERGHALVFFEQISCAQAAVKEMRG 604
Query: 79 SDFRGNPIKIEFA 91
+ RG ++++FA
Sbjct: 605 TALRGRRLQVDFA 617
>gi|301771944|ref|XP_002921434.1| PREDICTED: ELAV-like protein 3-like [Ailuropoda melanoleuca]
Length = 350
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 139/318 (43%), Gaps = 35/318 (11%)
Query: 9 NRAYDDKEAPPSSNLWVGNLSADTTDADLKELFGKFGAL-------DKVTTYSSRSFAFV 61
N A DD + +NL V L + T + K LFG G + DK+T S + FV
Sbjct: 34 NGATDDSK----TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG-QSLGYGFV 88
Query: 62 YFKRVEDAKAAKDALQGSDFRGNPIKIEFARPAKPS---KHLWVGGISQTVSKEELEEGF 118
+ DA A + L G + IK+ +ARP+ S +L+V G+ +T+S++E+E+ F
Sbjct: 89 NYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLF 148
Query: 119 LKFGNIEDFKFLKDGNT------AFVEYSRLEDAAEALKNINGRQIGG--EQLRVDFLRS 170
++G I + L D T F+ + + +A EA+K +NG++ G E + V F +
Sbjct: 149 SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 208
Query: 171 QPSRREQWPNSH----DARD--GPIIGRGTGFSDNHSAYKRSHPQSSVGRNRDGPPSKIL 224
+ Q +H AR GP+ + F + A + VG + +
Sbjct: 209 PSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRFSPIAIDGMSGLAGVGLSGGAAGAGWC 268
Query: 225 WVGYPPSVQMDEQMLHNAMILFGEIERIK------SYPSRNYSFVEFRSVDEARRAKEGL 278
Y S + DE +L FG + +K + + + FV + DEA A L
Sbjct: 269 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 328
Query: 279 QGRLFNDPRITIMFSSSE 296
G + + + F +S+
Sbjct: 329 NGYRLGERVLQVSFKTSK 346
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,242,852,768
Number of Sequences: 23463169
Number of extensions: 737642998
Number of successful extensions: 1488293
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2526
Number of HSP's successfully gapped in prelim test: 17361
Number of HSP's that attempted gapping in prelim test: 1419914
Number of HSP's gapped (non-prelim): 60429
length of query: 957
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 804
effective length of database: 8,769,330,510
effective search space: 7050541730040
effective search space used: 7050541730040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)