BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002169
(957 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LET7|CI111_ARATH Calmodulin-interacting protein 111 OS=Arabidopsis thaliana GN=CIP111
PE=1 SV=1
Length = 1022
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/919 (60%), Positives = 672/919 (73%), Gaps = 42/919 (4%)
Query: 26 SQIYPFFQVLKNEVRLSSSLSYTMGCPLSGRTVFVYTIQSQFLTGLVNGSNKPYNGEANH 85
+ ++ +V K+ VR+S +L Y +GCP+SGRTVFVY + L+ NG+ + + NH
Sbjct: 141 TTVFSSSKVFKDAVRISLNLCYGLGCPVSGRTVFVYPVSGPSLSDQFNGNGRSRYDDVNH 200
Query: 86 FSVCTCQELHLELVPLRSRLKMNGAAFSKMKVSAERSRDQLGNGIDSSPKTPMYQPRLSS 145
S+ C+EL LEL P R+ L+ A E S +Q GNG +S+PKTP + SS
Sbjct: 201 LSLLACKELCLELTPFRNMLQAKNAF--------ESSYEQNGNG-NSTPKTPANLQKFSS 251
Query: 146 QSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLEDESAIKLLQTCAASWLYSRSLLCG 205
SP+ EDSV S + + D++EVL +ES+ KLLQ CA+SWLY SLL G
Sbjct: 252 PRPKSPVSPIIEDSVF-SCKQRFSSESSIDLREVLSNESSKKLLQICASSWLYPCSLLYG 310
Query: 206 NLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVINHETKVYLYPPL 265
N V+VP+LSEI IF V A+K P+D +N ++AF+IN ETKVYL+ L
Sbjct: 311 NFVSVPILSEICIFCVKRADKRPSDTSNR-------------NHAFMINQETKVYLHHTL 357
Query: 266 NAVSKSLREGTLPNAQI-EFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSL 324
+ S+ + Q E +NV +ISKLGGLSKEYAIL+DII SSS+K++LSSL
Sbjct: 358 DLASEIQGRTFVQGLQFDEGENVGC----EISKLGGLSKEYAILRDIIDSSSIKNSLSSL 413
Query: 325 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 384
GLRPTKGVL+HGPPGTGKTSLAR A SGVN F+VNGPE++SQ GESE+AL EVF SA
Sbjct: 414 GLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSA 473
Query: 385 SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 444
S + PAVVFID+LDAIAPARK+GGEELSQRMVATLLNLMDG+ RTDGV+VIAATNRPDSI
Sbjct: 474 SNATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSI 533
Query: 445 EPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 504
EPALRRPGRLDREIEI VPS QR +ILH +L GM HSL + +VE L+MATHGFVGADL+
Sbjct: 534 EPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLS 593
Query: 505 ALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDS 564
ALC EAA VCLRR+ +SS L E +++ SD S + ++S+ C+
Sbjct: 594 ALCCEAAFVCLRRHLDQSSSSSNLP-----LEEAPIAESSSNMSDISSDSSDSASSCI-- 646
Query: 565 ASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKA 624
T TS S L TVS +AD+ N + S M + L + DFE A
Sbjct: 647 ----TISATTSGAQRSFSLDETVSLVADDIQNNGNSCSEQMLRKQGEHTLSVGFEDFENA 702
Query: 625 RMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGIL 684
+ K+RPSAMREVILEVPKV WEDVGGQ EVK QLMEAVEWPQKHQ+AFKRIGTRPP+GIL
Sbjct: 703 KTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGIL 762
Query: 685 MFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIF 744
MFGPPGCSKTLMARAVASEA LNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIF
Sbjct: 763 MFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIF 822
Query: 745 FDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRP 804
FDEID LA+IRGKE+DGVSVSDRVMSQLLVELDGLHQRV VTVIAATNRPDKID ALLRP
Sbjct: 823 FDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRP 882
Query: 805 GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAI 864
GRFDRLLYVGPPNETDRE I +IHLRKIPCSSD+ ++ELA +++G TGADISLICREAAI
Sbjct: 883 GRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAI 942
Query: 865 SAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHSNAEADESGYQLRPSK 924
+A+EE+L+ I+M+HLK AI ++P+EI SYK LS KFQRLVH++ + +E Q P
Sbjct: 943 AALEESLEMEEISMRHLKAAISQIEPTEILSYKALSEKFQRLVHTDPQREEEVTQ--PGN 1000
Query: 925 SIGSNMWTLIKSISLFLCR 943
++WT ++S+++FL R
Sbjct: 1001 K-SRSLWTPLRSVAMFLRR 1018
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/587 (41%), Positives = 331/587 (56%), Gaps = 60/587 (10%)
Query: 324 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 383
LG+ P +GVLLHGPPG GKT LA A + + + V PE+VS GESEQ L E+FD
Sbjct: 292 LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQ 351
Query: 384 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 440
A +AP +VFIDE+DAI P R+ +++ +R+VA LL MD V T VLVI ATNR
Sbjct: 352 AVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 411
Query: 441 PDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGF 498
PDS++PALRR GR DRE+ + +P A R IL L + L + +A T GF
Sbjct: 412 PDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLR---LPETFNFCHLAHLTPGF 468
Query: 499 VGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS 558
VGADL ALC EAA+ + R Q + E EG Q+ T +
Sbjct: 469 VGADLMALCREAAMCAVNRVLMKQQAQQKKKP-----EIEGLPSEGDQEERLGAEPTSET 523
Query: 559 RDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLEL 618
+D L LL PL E+ L +EL
Sbjct: 524 QDELQRL--------LGLLRDQDPLS-----------------------EEQMQGLCIEL 552
Query: 619 VDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTR 678
DF A +V+PSA RE + VP V W D+G +++ +L+ A+ P ++ + F+ +G
Sbjct: 553 NDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLG 612
Query: 679 PPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARAN 738
P GIL+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE+AVR +F +A+ +
Sbjct: 613 TPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNS 672
Query: 739 APSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 798
AP +IFFDE+D L R G SV RV++QLL E+DGL R V ++AATNRPD ID
Sbjct: 673 APCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLETRQQVFILAATNRPDIID 730
Query: 799 PALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELAC-LSEGC-TGA 853
PA+LRPGR D+ L+VG P DR I + + K P DVN+ +A L C TGA
Sbjct: 731 PAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGA 790
Query: 854 DISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQPS 891
D++ + REA++ A+ + + A +++ +H + A + V+PS
Sbjct: 791 DLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKPS 837
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/259 (41%), Positives = 148/259 (57%), Gaps = 14/259 (5%)
Query: 616 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQ----REVKTQLMEAVEWPQKHQEA 671
L+ VD E + + + R L++ VK+EDVGG +EV L+ +H E
Sbjct: 234 LQEVDGEIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEVCKMLIH-----MRHPEV 288
Query: 672 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 731
++ +G PP G+L+ GPPGC KTL+A A+A E L L V PE+ S GESE+ +R L
Sbjct: 289 YQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLREL 348
Query: 732 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVI 788
F +A +NAP I+F DEID + R E + R+++QLL +D L+ V VI
Sbjct: 349 FDQAVSNAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVI 406
Query: 789 AATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSE 848
ATNRPD +DPAL R GRFDR + +G P+E RE I + RK+ N LA L+
Sbjct: 407 GATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTP 466
Query: 849 GCTGADISLICREAAISAI 867
G GAD+ +CREAA+ A+
Sbjct: 467 GFVGADLMALCREAAMCAV 485
Score = 169 bits (428), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 140/245 (57%), Gaps = 7/245 (2%)
Query: 278 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 336
P+A+ E F V DI L + E ++ I+ +LGL G+LL G
Sbjct: 564 PSAKREGFVTVPNVTWADIGALEDIRDE--LIMAILAPVRNPDQFRTLGLGTPAGILLAG 621
Query: 337 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 396
PPG GKT LA+ A++SG+N +V GPE+++ GESE+A+ +VF A SAP V+F DE
Sbjct: 622 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 681
Query: 397 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 456
+DA+ P R D S R+V LL MDG+ V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 682 VDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDK 741
Query: 457 EIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT----HGFVGADLAALCNEAAL 512
+ + +P PA R+ IL + LD +V ++A + + GADL AL EA+L
Sbjct: 742 TLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASL 801
Query: 513 VCLRR 517
LR+
Sbjct: 802 CALRQ 806
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/588 (40%), Positives = 329/588 (55%), Gaps = 62/588 (10%)
Query: 324 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 383
LG+ P +GVLLHGPPG GKT LA A + + + V PE+VS GESEQ L E+F+
Sbjct: 293 LGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 352
Query: 384 ASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMD---GVCRTDGVLVIAATNR 440
A +AP ++FIDE+DAI P R+ +++ +R+VA LL MD V T VLVI ATNR
Sbjct: 353 AVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNR 412
Query: 441 PDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGF 498
PDS++PALRR GR DREI + +P A R IL L + L ++ +A T GF
Sbjct: 413 PDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR---LPQAFDFCHLAHLTPGF 469
Query: 499 VGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESS 558
VGADL ALC EAA+ + R L + +
Sbjct: 470 VGADLMALCREAAMCAVNR---------------VLMKLQEQQ----------------- 497
Query: 559 RDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGC-ALKLE 617
+P DLP+ + SE D + +SE+ L +E
Sbjct: 498 -----KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIE 552
Query: 618 LVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGT 677
L DF A V+PSA RE + VP V W D+G +++ +L A+ P ++ + FK +G
Sbjct: 553 LNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGL 612
Query: 678 RPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 737
P G+L+ GPPGC KTL+A+AVA+E+GLNF++VKGPEL + +VGESE+AVR +F +A+
Sbjct: 613 VTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKN 672
Query: 738 NAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 797
+AP +IFFDE+D L R G SV RV++QLL E+DGL R V ++AATNRPD I
Sbjct: 673 SAPCVIFFDEVDALCPRRSDRETGASV--RVVNQLLTEMDGLEARQQVFIMAATNRPDII 730
Query: 798 DPALLRPGRFDRLLYVGPPNETDREEIFRIHLR---KIPCSSDVNIRELAC-LSEGC-TG 852
DPA+LRPGR D+ L+VG P DR I + + K P +DVN+ +A L C TG
Sbjct: 731 DPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTG 790
Query: 853 ADISLICREAAISAIEENLDAS---------RITMQHLKTAIRHVQPS 891
AD+S + REA+I A+ + + +++ +H + A + V+ S
Sbjct: 791 ADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSS 838
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 161/293 (54%), Gaps = 19/293 (6%)
Query: 587 VSEIADNFHNGV--SDSSGGMFMSEKGCALK---LELVDFEKARMKVRPSAMREVILEVP 641
++EI D+ + + SD + KG K L+ VD E + + + R + ++
Sbjct: 201 ITEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQIS 260
Query: 642 KVKWEDVGGQ----REVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMA 697
VK+EDVGG +EV L+ +H E + +G PP G+L+ GPPGC KTL+A
Sbjct: 261 NVKFEDVGGNDMTLKEVCKMLIH-----MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 315
Query: 698 RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 757
A+A E L L V PE+ S GESE+ +R LF +A +NAP IIF DEID + R
Sbjct: 316 HAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR-- 373
Query: 758 ESDGVSVSDRVMSQLLVELDGLHQ---RVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 814
E + R+++QLL +D L+ V VI ATNRPD +DPAL R GRFDR + +G
Sbjct: 374 EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLG 433
Query: 815 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 867
P+E RE I + RK+ + LA L+ G GAD+ +CREAA+ A+
Sbjct: 434 IPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV 486
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 144/254 (56%), Gaps = 7/254 (2%)
Query: 278 PNAQIE-FQNVQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHG 336
P+A+ E F V DI L + +E + I+ +LGL GVLL G
Sbjct: 565 PSAKREGFVTVPNVTWADIGALEDIREELTMA--ILAPVRNPDQFKALGLVTPAGVLLAG 622
Query: 337 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 396
PPG GKT LA+ A++SG+N +V GPE+++ GESE+A+ +VF A SAP V+F DE
Sbjct: 623 PPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDE 682
Query: 397 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 456
+DA+ P R D S R+V LL MDG+ V ++AATNRPD I+PA+ RPGRLD+
Sbjct: 683 VDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDK 742
Query: 457 EIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA----THGFVGADLAALCNEAAL 512
+ + +P PA RL IL + LD++V ++A + GADL+AL EA++
Sbjct: 743 TLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASI 802
Query: 513 VCLRRYSKIQTSSD 526
LR+ Q S +
Sbjct: 803 CALRQEMARQKSGN 816
>sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing protein C16E9.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16E9.10c PE=1 SV=1
Length = 779
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 237/607 (39%), Positives = 345/607 (56%), Gaps = 69/607 (11%)
Query: 325 GLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSA 384
G+ P +GVLLHGPPG GKT LA A++ GV +++ P +VS GESE+ + EVF+ A
Sbjct: 204 GIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEA 263
Query: 385 SQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVC--RTDG--VLVIAATNR 440
AP ++FIDE+DA+ P R+ E+ +R+VA L MD + +TDG VLVI ATNR
Sbjct: 264 KSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNR 323
Query: 441 PDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 500
PDS++ ALRR GR DREI + VPS R +IL + G++ S D + L+ T G+VG
Sbjct: 324 PDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSG-DFDFRQLAKQTPGYVG 382
Query: 501 ADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 560
ADL AL A ++ ++R + + L + + +SD + D S
Sbjct: 383 ADLKALTAAAGIIAIKR---------IFNEISPLNKLDLNSDPRFNELD--------SDM 425
Query: 561 CLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVD 620
LDS + SLPL S I + N D E+ L + D
Sbjct: 426 ALDS-------------NDSLPLDH--SSIIQRYLNAHPDP----LSPEELEPLAICPQD 466
Query: 621 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 680
F +A KV+PS+ RE VP V W ++G + ++ +L A+ P K E ++ +G P
Sbjct: 467 FIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAP 526
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
TG+L++GPPGC KTL+A+AVA+E+ NF++++GPEL +K+VGESE+AVR +F +ARA++P
Sbjct: 527 TGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSP 586
Query: 741 SIIFFDEIDGLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 799
+IFFDE+D + R D +S S RV++ LL ELDGL R V VIAATNRPD IDP
Sbjct: 587 CVIFFDELDAMVPRR---DDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDP 643
Query: 800 ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC---TGADIS 856
A+LRPGR D+ L V P+ +R EI + ++ P +VN+ L E C +GAD++
Sbjct: 644 AMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLG-RDERCSNFSGADLA 702
Query: 857 LICREAAISAIE-----------------ENLDASRITMQHLKTAIRHVQPSEIHSYKEL 899
+ REAA++A+ L+ R+T + A ++++PS ++
Sbjct: 703 ALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFELAFKNIKPSVSDRDRQ- 761
Query: 900 SAKFQRL 906
K+QRL
Sbjct: 762 --KYQRL 766
Score = 169 bits (428), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
S+G+ GVLL GPPG GKT LA+ A++S N ++ GPE++++ GESE+A+ +VF
Sbjct: 520 SVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFL 579
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 442
A S+P V+F DELDA+ P R D E S R+V TLL +DG+ GV VIAATNRPD
Sbjct: 580 RARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPD 639
Query: 443 SIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHGFVGA 501
I+PA+ RPGRLD+ + + +P +R+EIL L H ++ +V F GA
Sbjct: 640 IIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGA 699
Query: 502 DLAALCNEAALVCLR 516
DLAAL EAA+ LR
Sbjct: 700 DLAALVREAAVTALR 714
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 136/226 (60%), Gaps = 6/226 (2%)
Query: 647 DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGL 706
D+GG + +L+E V P KH E ++ G PP G+L+ GPPGC KT++A A+A+E G+
Sbjct: 175 DIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGV 234
Query: 707 NFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSD 766
F+++ P + S GESEK VR +F +A++ AP ++F DEID + R ES +
Sbjct: 235 PFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR--ESAQREMER 292
Query: 767 RVMSQLLVELDGL-HQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 822
R+++Q L +D L ++ + V VI ATNRPD +D AL R GRFDR + + P++ RE
Sbjct: 293 RIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDARE 352
Query: 823 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 868
+I R + + S D + R+LA + G GAD+ + A I AI+
Sbjct: 353 KILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398
>sp|Q07844|RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RIX7 PE=1 SV=1
Length = 837
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/663 (36%), Positives = 369/663 (55%), Gaps = 75/663 (11%)
Query: 270 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 328
K +EGT + + + ++ + LGG+ A L ++I + S G+ P
Sbjct: 179 KRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEP 238
Query: 329 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 388
+GVLLHGPPG GKTS+A A + V +++ P VVS GESE+ + ++FD A A
Sbjct: 239 PRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLA 298
Query: 389 PAVVFIDELDAIAPARKDGG--EELSQRMVATLLNLMDGVC--RTDG--VLVIAATNRPD 442
P +VF DE+DAI P R DGG E+ +R+VA LL MD + +T+G V++I ATNRPD
Sbjct: 299 PCLVFFDEIDAITPKR-DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPD 357
Query: 443 SIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMA--THGFVG 500
S++ ALRR GR DREI + VP+ RL IL + ++ +D +++ +A T GFVG
Sbjct: 358 SLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLK---IDGAIDFAKLAKLTPGFVG 414
Query: 501 ADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRD 560
ADL AL A ++R QT +++ + T + D M + D + N ESS
Sbjct: 415 ADLKALVTAAGTCAIKRI--FQTYANIKSTPTT--ATDSSEDNM--EIDETANGDESS-- 466
Query: 561 CLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVD 620
L + + LP S+ V + N+ +S E+ L ++ D
Sbjct: 467 -LKNTANMIDPLPLSV----------VQQFIRNYPEPLS--------GEQLSLLSIKYED 507
Query: 621 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 680
F KA ++P+A RE VP V W +VG + V+ +L A+ P K E ++++G P
Sbjct: 508 FLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAP 567
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
G+L++GPPGC KTL+A+AVA+E+ NF+++KGPEL +K+VGESE+++R +F +ARA+ P
Sbjct: 568 GGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP 627
Query: 741 SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 800
+IFFDE+D L R ++ S RV++ LL ELDGL+ R + VI ATNRPD IDPA
Sbjct: 628 CVIFFDELDALVPRR--DTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPA 685
Query: 801 LLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGC---TGADI 855
+LRPGR D+ L++ PN ++ +I + + P SSDV+ E+ +E C +GAD+
Sbjct: 686 MLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEI-IRNEKCNNFSGADL 744
Query: 856 SLICREAAI--------------SAIEENLDASR-------------ITMQHLKTAIRHV 888
+ + RE+++ S ++ +LD +TM ++A+R +
Sbjct: 745 AALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKI 804
Query: 889 QPS 891
+PS
Sbjct: 805 KPS 807
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 356 bits (914), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 229/632 (36%), Positives = 331/632 (52%), Gaps = 117/632 (18%)
Query: 322 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 381
S LG+ P +G+LLHGP G GKT LA+ A + V LF ++ E+ S GESE + +F
Sbjct: 243 SHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLF 302
Query: 382 DSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGV--------------- 426
+A AP ++FIDE+DAIAP R+ +++ +R+V+ LL MD +
Sbjct: 303 SNAIAQAPCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQ 362
Query: 427 -----------------------------------CRTDGVLVIAATNRPDSIEPALRRP 451
+ V+VI ATNRP+S++ ALR
Sbjct: 363 TEQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIG 422
Query: 452 GRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT--HGFVGADLAALCNE 509
GR D+EI + +P R +IL + S M L++ +Y +AT G+VGAD+ L E
Sbjct: 423 GRFDKEICLGIPDQTARCKILKVITSKMR---LENNFDYEEIATLTPGYVGADINLLVKE 479
Query: 510 AALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCT 569
AA + R I TS+ G S + S + NI
Sbjct: 480 AATNSVNR---IFTSN-----------LNGASSSSSSSSSSTTNINNIG----------- 514
Query: 570 SDLPTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVR 629
L T LL S PL EK +L +E++DF+KA KV
Sbjct: 515 --LSTELLISKEPLE-----------------------PEKLNSLYIEMIDFKKALKKVV 549
Query: 630 PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 689
P+A RE +P V W+DVG V+ +L ++ P ++ + +K +G P G+LM+GPP
Sbjct: 550 PAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPP 609
Query: 690 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 749
GC KTL+A+A+ASE NF++VKGPEL +K+VGESE+AVR +F +A A++P +IFFDE D
Sbjct: 610 GCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFD 669
Query: 750 GLAAIRGKESDGVS-VSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 808
LA RG G + ++RV++QLL E+DGL +R V +IAATNRPD ID A+ RPGR D
Sbjct: 670 ALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLD 729
Query: 809 RLLYVGPPNETDREEIFRIHLRKIPCSSDVNI----RELACLSEGCTGADISLICREAAI 864
+++YV P+ +R EI + KIP DV++ +L C S +GAD+SL+ +EAA
Sbjct: 730 KMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHS--FSGADLSLLVKEAAN 787
Query: 865 SAIEENLDAS-----RITMQHLKTAIRHVQPS 891
AI D + +TM+ A+ ++PS
Sbjct: 788 HAISRGFDNNSTEPDTVTMEDFIFALSKIKPS 819
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 20/262 (7%)
Query: 261 LYPPLNAVSKSLREGTLPNAQIE-FQNVQATVEQDISKLGGLSKEY--AILKDIIISSSV 317
LY + K+L++ +P A+ E F + D+ L G+ +E +IL+ I
Sbjct: 534 LYIEMIDFKKALKK-VVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKY 592
Query: 318 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 377
K+ +G+ GVL++GPPG GKT LA+ A + N +V GPE++++ GESE+A+
Sbjct: 593 KN----MGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAV 648
Query: 378 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ---RMVATLLNLMDGVCRTDGVLV 434
+VF A+ S+P V+F DE DA+AP R G +Q R+V LL MDG+ + V +
Sbjct: 649 RQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFI 708
Query: 435 IAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSL-LDSEVEYLSM 493
IAATNRPD I+ A+ RPGRLD+ + + +PSP +R EIL L H + + +V+ + +
Sbjct: 709 IAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLT----HKIPIHQDVDLIKV 764
Query: 494 AT----HGFVGADLAALCNEAA 511
T H F GADL+ L EAA
Sbjct: 765 GTDLRCHSFSGADLSLLVKEAA 786
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 141/278 (50%), Gaps = 52/278 (18%)
Query: 640 VPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARA 699
+P + + ++GG + E +E+P H E + +G PP GIL+ GP GC KTL+A+A
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 700 VASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKES 759
+A E + A+ E+ S GESE VR+LF+ A A AP IIF DEID +A R ES
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR--ES 327
Query: 760 DGVSVSDRVMSQLLVELDGLH--------------------------------------- 780
+ R++SQLL +D L+
Sbjct: 328 ASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTAS 387
Query: 781 -----------QRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHL 829
++ +V VI ATNRP+ +D AL GRFD+ + +G P++T R +I ++
Sbjct: 388 NNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVIT 447
Query: 830 RKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 867
K+ ++ + E+A L+ G GADI+L+ +EAA +++
Sbjct: 448 SKMRLENNFDYEEIATLTPGYVGADINLLVKEAATNSV 485
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 353 bits (905), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 217/609 (35%), Positives = 320/609 (52%), Gaps = 86/609 (14%)
Query: 274 EGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGV 332
EG N + E N+ DI GG K+ A +++++ + ++G++P +GV
Sbjct: 195 EGEPINREDEENNMNEVGYDDI---GGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGV 251
Query: 333 LLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVV 392
L++GPPGTGKT +AR A+++G F +NGPEV+S+ GESE L + F+ A ++APA++
Sbjct: 252 LMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAII 311
Query: 393 FIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPG 452
FIDE+D+IAP R E+ +R+V+ LL LMDG+ V+VIA A RP
Sbjct: 312 FIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIA----------ATNRPN 361
Query: 453 RLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 512
+D PA R D EV D+ L
Sbjct: 362 SID---------PALR-----------RFGRFDREV-------------DIGIPDATGRL 388
Query: 513 VCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDL 572
LR ++K +D + E G+ + S CS + R+ +D ++
Sbjct: 389 EVLRIHTKNMKLADDVDLEALAAETHGYVGADIA-SLCSEAAMQQIREKMDLIDLDEDEI 447
Query: 573 PTSLLSSSLPLRGTVSEIADNFHNGVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSA 632
+L S + DNF + +S+ PSA
Sbjct: 448 DAEVLDS-------LGVTMDNFRFALGNSN---------------------------PSA 473
Query: 633 MREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCS 692
+RE ++E V W+DVGG E+K +L E VE+P H + + + G P G+L +GPPG
Sbjct: 474 LRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTG 533
Query: 693 KTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLA 752
KTL+A+AVA+E NF++VKGPEL S W GESE +R +F KARA AP+++F DE+D +A
Sbjct: 534 KTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIA 593
Query: 753 AIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLL 811
RG D SDRV++QLL E+DG++ + NV VI ATNRPD+IDPA+LRPGR D+L+
Sbjct: 594 KARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLI 653
Query: 812 YVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 871
YV P+E R I LRK P + + +A ++G +GAD+ I + AA AI++++
Sbjct: 654 YVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSI 713
Query: 872 DASRITMQH 880
+A R QH
Sbjct: 714 EAHR---QH 719
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 167/268 (62%), Gaps = 17/268 (6%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H + FK IG +PP G+LM+GPPG KTLMARAVA
Sbjct: 210 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVA 269
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DEID +A R K ++G
Sbjct: 270 NETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDK-TNG 328
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V RV+SQLL +DG+ R NV VIAATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 329 -EVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 387
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN----------- 870
E+ RIH + + + DV++ LA + G GADI+ +C EAA+ I E
Sbjct: 388 LEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEI 447
Query: 871 ----LDASRITMQHLKTAIRHVQPSEIH 894
LD+ +TM + + A+ + PS +
Sbjct: 448 DAEVLDSLGVTMDNFRFALGNSNPSALR 475
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 163/304 (53%), Gaps = 31/304 (10%)
Query: 229 ADLTNERSQPQVTESMD------HESNAFVINH---ETKVYLYPPLNAVSKSLREGTLPN 279
A L +E + Q+ E MD E +A V++ + + N+ +LRE + +
Sbjct: 422 ASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVES 481
Query: 280 AQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRPTKGVLLHGPP 338
+ + +V GGL + LK+ + + + GL P+KGVL +GPP
Sbjct: 482 VNVTWDDV-----------GGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPP 530
Query: 339 GTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELD 398
GTGKT LA+ A + N +V GPE++S YGESE + ++FD A +AP VVF+DELD
Sbjct: 531 GTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELD 590
Query: 399 AIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRL 454
+IA AR D G S R+V LL MDG+ V VI ATNRPD I+PA+ RPGRL
Sbjct: 591 SIAKARGGSLGDAG-GASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRL 649
Query: 455 DREIEIAVPSPAQRLEILHALL--SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAAL 512
D+ I + +P RL IL+A L + +E L E+ ++ AT GF GADL + AA
Sbjct: 650 DQLIYVPLPDENARLSILNAQLRKTPLEPGL---ELTAIAKATQGFSGADLLYIVQRAAK 706
Query: 513 VCLR 516
++
Sbjct: 707 YAIK 710
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 352 bits (902), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 206/576 (35%), Positives = 311/576 (53%), Gaps = 79/576 (13%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG ++ A +++++ + S+G++P +G+L++GPPGTGKT +AR A+++G
Sbjct: 226 IGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAF 285
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A +++PA++FIDE+D+IAP R+ E+ +R+V
Sbjct: 286 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVV 345
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+V+A A RP +D PA R
Sbjct: 346 SQLLTLMDGMKARSNVVVMA----------ATNRPNSID---------PALR-------- 378
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFE 536
D EV D+ L LR ++K +D + E
Sbjct: 379 ---RFGRFDREV-------------DVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAE 422
Query: 537 FEGHSDTMLQDSDCSRNITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADNFHN 596
G+ + L S CS + R+ +D ++ +L S + DNF
Sbjct: 423 THGYVGSDLA-SLCSEAAMQQIREKMDMIDLDEDEIDAEVLDS-------LGVTMDNFRF 474
Query: 597 GVSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKT 656
+ S+ PSA+RE ++EVP V+WED+GG EVK
Sbjct: 475 ALGSSN---------------------------PSALRETVVEVPNVRWEDIGGLEEVKR 507
Query: 657 QLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPEL 716
+L E V+ P + E F R G P G+L FGPPG KTL+A+A+A+E NF++VKGPEL
Sbjct: 508 ELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPEL 567
Query: 717 FSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVEL 776
S W GESE VR +F KARA AP ++F DE+D +A RG + DRV++QLL E+
Sbjct: 568 LSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEM 627
Query: 777 DGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSS 836
DG++ + NV VI ATNRPD+IDPAL+RPGR D+L+YV P+E R I + LR P +
Sbjct: 628 DGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAE 687
Query: 837 DVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
DV++R +A + G +GAD+ + + A AI+++++
Sbjct: 688 DVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIE 723
Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 155/231 (67%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R Q+ E VE P +H + FK IG +PP GILM+GPPG KTLMARAVA
Sbjct: 220 EVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 279
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A N+P+IIF DEID +A R K ++G
Sbjct: 280 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK-TNG 338
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V RV+SQLL +DG+ R NV V+AATNRP+ IDPAL R GRFDR + VG P+ T R
Sbjct: 339 -EVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGR 397
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI RIH + + + DV++ ++A + G G+D++ +C EAA+ I E +D
Sbjct: 398 LEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMD 448
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 132/232 (56%), Gaps = 14/232 (6%)
Query: 324 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 383
G+ P+KGVL GPPGTGKT LA+ A++ N +V GPE++S +GESE + ++FD
Sbjct: 526 FGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDK 585
Query: 384 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 441
A +AP VVF+DELD+IA AR G R+V LL MDGV V VI ATNRP
Sbjct: 586 ARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRP 645
Query: 442 DSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLL--DSEVEYLSMATHGFV 499
D I+PAL RPGRLD+ I + +P R IL L H+ + D ++ ++ ATHGF
Sbjct: 646 DQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQL---RHTPVAEDVDLRAVAKATHGFS 702
Query: 500 GADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCS 551
GADL + A + ++ I+ + TG E +D ++ D D S
Sbjct: 703 GADLEFVVQRAVKLAIK--DSIEEDIKRENETG-----EAPADDVVMDEDAS 747
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 329 bits (844), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 157/276 (56%), Positives = 208/276 (75%), Gaps = 1/276 (0%)
Query: 614 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 673
LK+ + DF++A V PSAMREV++EVP VKWED+GG EVK +L EAVEWP K +E F+
Sbjct: 420 LKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFE 479
Query: 674 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 733
+IG RPP G+L+FGPPG KTL+A+AVA+E+G NF++VKGPE+FSKWVGESEKA+R +F
Sbjct: 480 KIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFR 539
Query: 734 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 793
KAR +AP IIFFDEID +A RG++ +V+D+V++QLL ELDG+ + +V VIAATNR
Sbjct: 540 KARQSAPCIIFFDEIDAIAPKRGRDLSS-AVTDKVVNQLLTELDGMEEPKDVVVIAATNR 598
Query: 794 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 853
PD IDPALLRPGR DR++ V P+E R +IF+IH R + + DVN+ ELA +EG TGA
Sbjct: 599 PDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGA 658
Query: 854 DISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 889
DI +CREAA+ A+ E++ L+ I ++Q
Sbjct: 659 DIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQ 694
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 188/292 (64%), Gaps = 20/292 (6%)
Query: 616 LELVDFEKARMKVRP-SAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR 674
+ + DF +K P S ++E +VP V +ED+GG +E ++ E +E P +H E F++
Sbjct: 150 VRVTDFTHVELKEEPVSEIKET--KVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEK 207
Query: 675 IGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAK 734
+G PP G+L+ GPPG KTL+A+AVA+EAG NF + GPE+ SK+VGE+E+ +R +F +
Sbjct: 208 LGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEE 267
Query: 735 ARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRP 794
A NAPSIIF DEID +A R E+ G V R+++QLL +DGL R V VI ATNRP
Sbjct: 268 AEENAPSIIFIDEIDAIAPKRD-EATG-EVERRLVAQLLTLMDGLKGRGQVVVIGATNRP 325
Query: 795 DKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGAD 854
+ +DPAL RPGRFDR + +G P+ R+EI +IH R +P + DV++ LA ++ G GAD
Sbjct: 326 NALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGAD 385
Query: 855 ISLICREAAISAI---------------EENLDASRITMQHLKTAIRHVQPS 891
++ +C+EAA+ A+ +E LD ++TM K A++ V+PS
Sbjct: 386 LAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPS 437
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 161/241 (66%), Gaps = 5/241 (2%)
Query: 278 PNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHG 336
P ++I+ V +DI GGL +E ++++I + LG+ P KGVLL G
Sbjct: 164 PVSEIKETKVPDVTYEDI---GGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVG 220
Query: 337 PPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDE 396
PPGTGKT LA+ A+++G N + +NGPE++S+ GE+E+ L ++F+ A ++AP+++FIDE
Sbjct: 221 PPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDE 280
Query: 397 LDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDR 456
+DAIAP R + E+ +R+VA LL LMDG+ V+VI ATNRP++++PALRRPGR DR
Sbjct: 281 IDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDR 340
Query: 457 EIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
EI I VP R EIL M + D +++YL+ THGFVGADLAALC EAA+ LR
Sbjct: 341 EIVIGVPDREGRKEILQIHTRNMPLA-EDVDLDYLADVTHGFVGADLAALCKEAAMRALR 399
Query: 517 R 517
R
Sbjct: 400 R 400
Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 131/200 (65%), Gaps = 2/200 (1%)
Query: 318 KSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQAL 377
K +G+RP KGVLL GPPGTGKT LA+ A++SG N +V GPE+ S+ GESE+A+
Sbjct: 475 KEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAI 534
Query: 378 HEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 436
E+F A QSAP ++F DE+DAIAP R +D ++ ++V LL +DG+ V+VIA
Sbjct: 535 REIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIA 594
Query: 437 ATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 496
ATNRPD I+PAL RPGRLDR I + VP RL+I M + D +E L+ T
Sbjct: 595 ATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLA-EDVNLEELAKKTE 653
Query: 497 GFVGADLAALCNEAALVCLR 516
G+ GAD+ ALC EAA++ +R
Sbjct: 654 GYTGADIEALCREAAMLAVR 673
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 326 bits (836), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 215/310 (69%), Gaps = 18/310 (5%)
Query: 614 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 673
LK+ DF +A + PSAMREV++EVP VKWED+GG K +LMEAVEWP K+ E F+
Sbjct: 423 LKVTREDFMEALKNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFR 482
Query: 674 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 733
+PP GIL+FGPPG KTL+A+AVA+E+ NF++VKGPEL SKWVGESEK VR +F
Sbjct: 483 AANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFR 542
Query: 734 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 793
KAR AP +IFFDEID LA RG D V++RV+SQLL ELDGL + +V VIAATNR
Sbjct: 543 KARQVAPCVIFFDEIDSLAPRRGGIGDS-HVTERVVSQLLTELDGLEELKDVVVIAATNR 601
Query: 794 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 853
PD IDPALLRPGR +R +Y+ PP++ R EIF+IHLR P + DVNI ELA +EG +GA
Sbjct: 602 PDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGA 661
Query: 854 DISLICREAAISAI----------EENLDAS---RITMQHLKTAIRHVQPS----EIHSY 896
DI +CREA + AI EE +A+ +IT +H + A++ V+PS ++ Y
Sbjct: 662 DIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDVEKY 721
Query: 897 KELSAKFQRL 906
++L F R+
Sbjct: 722 EKLIEDFHRM 731
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 183/281 (65%), Gaps = 19/281 (6%)
Query: 626 MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 685
+K +P+ EV VP V +ED+GG + + E +E P KH E F+R+G PP G+L+
Sbjct: 164 LKEKPA--EEVKRAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLL 221
Query: 686 FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 745
+GPPG KTL+A+AVA+E +F+ + GPE+ SK+ GESE+ +R +F +A+ NAPSIIF
Sbjct: 222 YGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFI 281
Query: 746 DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 805
DEID +A R +E G V RV++QLL +DGL R +V VIAATNRPD IDPAL RPG
Sbjct: 282 DEIDSIAPKR-EEVTG-EVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPG 339
Query: 806 RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 865
RFDR + +G P++ R+EI IH RK+P + DV++ ELA L+ G GAD+ +C+EAA+
Sbjct: 340 RFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMH 399
Query: 866 AIE---------------ENLDASRITMQHLKTAIRHVQPS 891
A+ E ++ ++T + A+++++PS
Sbjct: 400 ALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKNIEPS 440
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 154/221 (69%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GGL +E +++++I + LG+ P KGVLL+GPPGTGKT +A+ A++ +
Sbjct: 184 IGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAH 243
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
++GPE++S+ YGESEQ L E+F+ A ++AP+++FIDE+D+IAP R++ E+ +R+V
Sbjct: 244 FIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVV 303
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
A LL LMDG+ V+VIAATNRPD+I+PALRRPGR DREIEI VP R EIL
Sbjct: 304 AQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHT 363
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M + D ++E L+ T+GFVGADL ALC EAA+ LRR
Sbjct: 364 RKMPLA-EDVDLEELAELTNGFVGADLEALCKEAAMHALRR 403
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 127/196 (64%), Gaps = 2/196 (1%)
Query: 326 LRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSAS 385
++P +G+LL GPPGTGKT LA+ A++S N +V GPE++S+ GESE+ + E+F A
Sbjct: 486 IKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKAR 545
Query: 386 QSAPAVVFIDELDAIAPARKD-GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSI 444
Q AP V+F DE+D++AP R G +++R+V+ LL +DG+ V+VIAATNRPD I
Sbjct: 546 QVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMI 605
Query: 445 EPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLA 504
+PAL RPGRL+R I I P R+EI L G + D +E L+ T G+ GAD+
Sbjct: 606 DPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLA-DDVNIEELAEKTEGYSGADIE 664
Query: 505 ALCNEAALVCLRRYSK 520
A+C EA ++ +R K
Sbjct: 665 AVCREAGMLAIRELIK 680
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 148/291 (50%), Positives = 211/291 (72%)
Query: 614 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 673
+K+ L DF +A +RPSAMRE+ ++VP V W D+GG +K +L +AVEWP KH E+F
Sbjct: 595 VKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFI 654
Query: 674 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 733
R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR F
Sbjct: 655 RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714
Query: 734 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 793
KARA APSIIFFDE+D LA RG +V+DRV++QLL E+DG+ Q +VT++AATNR
Sbjct: 715 KARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774
Query: 794 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 853
PD+ID AL+RPGR DR++YV P+ R EIF++ +P S++V++ EL ++ +GA
Sbjct: 775 PDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGA 834
Query: 854 DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 904
+I +CREAA+ A+EE++ A+ I +H A+ V P S + +Q
Sbjct: 835 EIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQ 885
Score = 212 bits (540), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 160/242 (66%), Gaps = 6/242 (2%)
Query: 285 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 343
Q+ Q V D+ +GGLS + +++II + S G+ +GVLL+GPPGTGKT
Sbjct: 344 QDNQFKVTYDM--IGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKT 401
Query: 344 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 403
+AR A++ G + +NGPE++S+ YGE+E L ++F A+ P+++FIDELDA+ P
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 404 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 460
R+ E+ +R+VA+LL LMDG+ ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Query: 461 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 520
VP+ RL+IL LL + H L ++E+ L+ + HG+VGADL LCNEA L LRR K
Sbjct: 522 GVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILK 581
Query: 521 IQ 522
Q
Sbjct: 582 KQ 583
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 18/269 (6%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
KV ++ +GG + E +E P K E FK G P G+L++GPPG KT++ARAVA
Sbjct: 349 KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA 408
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G + GPE+ SK+ GE+E +R +FA+A PSIIF DE+D L R E
Sbjct: 409 NEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQ 466
Query: 762 VSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNE 818
V RV++ LL +DG+ V+ V V+ ATNRP +D AL RPGRFD+ + +G PN
Sbjct: 467 NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526
Query: 819 TDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDAS--- 874
DR +I + LR++P ++ + +LA + G GAD+ ++C EA + A+ L
Sbjct: 527 QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 586
Query: 875 ---------RITMQHLKTAIRHVQPSEIH 894
+IT++ A+ ++PS +
Sbjct: 587 PDVKVAGLVKITLKDFLQAMNDIRPSAMR 615
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 324 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 383
+G++P KGVLL+GPPG KT +A+ A++SG+N + GPE++++ GESE+A+ E F
Sbjct: 656 MGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRK 715
Query: 384 ASQSAPAVVFIDELDAIAPARKD--GGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRP 441
A AP+++F DELDA+A R G ++ R++A LL MDG+ + V ++AATNRP
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRP 775
Query: 442 DSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGA 501
D I+ AL RPGR+DR I + +P A R EI M S + +++ L + T + GA
Sbjct: 776 DRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVS-NEVDLDELILQTDAYSGA 834
Query: 502 DLAALCNEAALVCL 515
++ A+C EAAL+ L
Sbjct: 835 EIVAVCREAALLAL 848
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 324 bits (831), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 207/294 (70%), Gaps = 4/294 (1%)
Query: 616 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 675
+++ D E A VR SAMRE ++E P V W D+GGQ EVK +L E+VEWP H E F R+
Sbjct: 518 VQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRL 577
Query: 676 GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 735
G RPP G+L++GPPGCSKT+ A+A+A+E GLNF+AVKGPELF K+VGESE+AVR +F KA
Sbjct: 578 GVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKA 637
Query: 736 RANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPD 795
R +PS+IFFDEID L A RG+++ SDRV++ LL ELDG+ NV V+AATNRPD
Sbjct: 638 RQASPSVIFFDEIDALTANRGEDNS----SDRVVAALLNELDGIEALRNVLVLAATNRPD 693
Query: 796 KIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADI 855
IDPAL+RPGR DRLLYVGPPN R++I +I K+ + DV++ +A +EGC+GA++
Sbjct: 694 MIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEV 753
Query: 856 SLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVHS 909
+C+EA + A+ E+L+A I H KTA+ ++ + E A F V S
Sbjct: 754 VALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITRDMLEYYASFSESVTS 807
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/241 (43%), Positives = 156/241 (64%), Gaps = 1/241 (0%)
Query: 295 ISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDS 353
S +GGL + A ++DI+ + + P +GVLL+GPPGTGKT + R A ++
Sbjct: 278 FSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEA 337
Query: 354 GVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQ 413
+FT++GP VV + GE+E L ++F+ A P+++FIDE+DA+AP R + E
Sbjct: 338 NAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES 397
Query: 414 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILH 473
R VATLL L+DG+ V+VIAATNRP+SI+ ALRRPGRL++EIEI +P + RL+I+
Sbjct: 398 RAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIK 457
Query: 474 ALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGT 533
LLSG+ + + D+++E L+ TH +VGADLAA+ EAAL ++R +Q + L G
Sbjct: 458 LLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSGLDIFGA 517
Query: 534 L 534
+
Sbjct: 518 V 518
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 150/265 (56%), Gaps = 13/265 (4%)
Query: 643 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 702
V + +GG + Q+ + VE P ++ E FK PP G+L++GPPG KT++ RAVA+
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 703 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 762
EA + GP + K++GE+E +R +F ARA+ PSIIF DEID LA R + D
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTE--DVS 393
Query: 763 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 822
R ++ LL LDG+ V VIAATNRP+ ID AL RPGR ++ + +G P+++ R
Sbjct: 394 EAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARL 453
Query: 823 EIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASR------ 875
+I ++ L +P +D + +LA + GAD++ + REAA+ AI+ + +
Sbjct: 454 DIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSGLD 513
Query: 876 ----ITMQHLKTAIRHVQPSEIHSY 896
+ M L+ A+ V+ S + +
Sbjct: 514 IFGAVQMDDLEFALSSVRQSAMREF 538
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 127/196 (64%), Gaps = 3/196 (1%)
Query: 320 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 379
T S LG+RP KGVLL+GPPG KT A+ A ++G+N V GPE+ + GESE+A+ +
Sbjct: 573 TFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQ 632
Query: 380 VFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 439
VF A Q++P+V+F DE+DA+ R G + S R+VA LLN +DG+ VLV+AATN
Sbjct: 633 VFQKARQASPSVIFFDEIDALTANR--GEDNSSDRVVAALLNELDGIEALRNVLVLAATN 690
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PAL RPGRLDR + + P+ R +I+ M+ + D +++ ++ T G
Sbjct: 691 RPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFA-EDVDLDLIAEKTEGCS 749
Query: 500 GADLAALCNEAALVCL 515
GA++ ALC EA L+ +
Sbjct: 750 GAEVVALCQEAGLIAM 765
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 149/291 (51%), Positives = 209/291 (71%)
Query: 614 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 673
+K+ L DF + +RPSAMREV ++VP V W D+GG +K +L +AVEWP KH ++F
Sbjct: 595 VKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFN 654
Query: 674 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 733
R+G +PP G+L++GPPGCSKT++A+A+A+E+GLNFLA+KGPEL +K+VGESE+AVR +F
Sbjct: 655 RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFR 714
Query: 734 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 793
KARA APSIIFFDE+D LA RG S +V+DRV++QLL E+DG+ Q NVTV+AATNR
Sbjct: 715 KARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 774
Query: 794 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 853
PD+ID AL+RPGR DR++YV P+ R EI + +P S++V++ EL ++ +GA
Sbjct: 775 PDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGA 834
Query: 854 DISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQ 904
+I +C+EAA+ A+EEN+ A I +H A+ V P S + +Q
Sbjct: 835 EIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTPRIPESLRRFYEDYQ 885
Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 159/242 (65%), Gaps = 6/242 (2%)
Query: 285 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 343
Q+ Q V D+ +GGL+ + +++II + S G+ +G+LL+GPPGTGKT
Sbjct: 344 QDSQFKVTYDM--IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401
Query: 344 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 403
+AR A++ G + +NGPE++S+ YGE+E L ++F A+ P+++FIDELDA+ P
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 404 RKDGGEELSQRMVATLLNLMDGVCR--TDG-VLVIAATNRPDSIEPALRRPGRLDREIEI 460
R+ E+ +R+VA+LL LMDG+ ++G VLV+ ATNRP +++ ALRRPGR D+EIEI
Sbjct: 462 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
Query: 461 AVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSK 520
+P+ RL+IL LL + H L +E+ L+ HG+VGADL ALCNEA L LRR +
Sbjct: 522 GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLR 581
Query: 521 IQ 522
Q
Sbjct: 582 KQ 583
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 20/270 (7%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
KV ++ +GG + E +E P K E FK G P G+L++GPPG KT++ARAVA
Sbjct: 349 KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKESD 760
+E G + GPE+ SK+ GE+E +R +FA+A PSIIF DE+D L R G +S+
Sbjct: 409 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 468
Query: 761 GVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 817
V RV++ LL +DG+ + V V+ ATNRP +D AL RPGRFD+ + +G PN
Sbjct: 469 ---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525
Query: 818 ETDREEIFRIHLRKIP-CSSDVNIRELACLSEGCTGADISLICREAAISAI------EEN 870
DR +I + LR++P + + LA + G GAD+ +C EA + A+ + N
Sbjct: 526 AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 585
Query: 871 LDAS------RITMQHLKTAIRHVQPSEIH 894
L S +IT+ + ++PS +
Sbjct: 586 LPDSKVAGMVKITLNDFLQGMNDIRPSAMR 615
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 130/198 (65%), Gaps = 3/198 (1%)
Query: 320 TLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHE 379
+ + +G++P KGVLL+GPPG KT +A+ A++SG+N + GPE++++ GESE+A+ E
Sbjct: 652 SFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRE 711
Query: 380 VFDSASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 437
+F A AP+++F DELDA+A R G ++ R++A LL MDG+ + V V+AA
Sbjct: 712 IFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAA 771
Query: 438 TNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHG 497
TNRPD I+ AL RPGR+DR I + +P A R EIL+ M S + +++ L + T
Sbjct: 772 TNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPIS-NEVDLDELVLQTDT 830
Query: 498 FVGADLAALCNEAALVCL 515
+ GA++ A+C EAAL+ L
Sbjct: 831 YSGAEIIAVCKEAALLAL 848
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 313 bits (801), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 147/272 (54%), Positives = 200/272 (73%), Gaps = 1/272 (0%)
Query: 620 DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 679
DF+ A +V PSAMREV++E+PK+ W+DVGG E K + E+VEWP E F R+G P
Sbjct: 436 DFKGALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEP 495
Query: 680 PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 739
P G+L++GPPG KTLMA+AVA+E NF++V+GP+L SKWVGESEKA+R F KAR A
Sbjct: 496 PAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA 555
Query: 740 PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 799
P++IFFDE+D LA RG+ + G +VS+RV++QLL ELDGL + V VIAATNRPD IDP
Sbjct: 556 PTVIFFDELDSLAPGRGQ-TGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDP 614
Query: 800 ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 859
AL+R GRFDRL+ VG P RE+I +IH + P ++DV++RELA ++G G+D++ I
Sbjct: 615 ALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIA 674
Query: 860 REAAISAIEENLDASRITMQHLKTAIRHVQPS 891
REAAI A+ ++ DA + M H + A+ +V+P+
Sbjct: 675 REAAIEALRDDEDADDVGMAHFRAAMENVRPT 706
Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/264 (44%), Positives = 164/264 (62%), Gaps = 17/264 (6%)
Query: 643 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 702
+ +ED+GG ++ E VE P KH + F+++G PP G+L+ GPPG KTL+A+AVA+
Sbjct: 186 ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245
Query: 703 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 762
E +F ++ GPE+ SK+ GESE+ +R +F A+ ++PSIIF DE+D +A R E
Sbjct: 246 ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR--EDVTG 303
Query: 763 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 822
V RV++QLL +DGL R V VIAATNR D +DPAL RPGRFDR + +G P+E RE
Sbjct: 304 EVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGRE 363
Query: 823 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI----------EENLD 872
EI +IH R +P S DVN+ LA + G GADI + +EAA+ A+ EE++
Sbjct: 364 EILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIP 423
Query: 873 ASRI-----TMQHLKTAIRHVQPS 891
S I + K A+ V+PS
Sbjct: 424 PSLIDRMIVKREDFKGALSEVEPS 447
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 150/222 (67%), Gaps = 2/222 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GGL E +++++ + LG+ P +GVLLHGPPGTGKT LA+ A+++ +
Sbjct: 191 IGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSAS 250
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F++ GPE++S+ YGESEQ L E+F+ A +P+++FIDELD+IAP R+D E+ +R+V
Sbjct: 251 FFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVERRVV 310
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
A LL +MDG+ V+VIAATNR D+++PALRRPGR DREIEI VP R EIL
Sbjct: 311 AQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHT 370
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRY 518
GM S D + L+ THGFVGAD+ +L EAA+ LRRY
Sbjct: 371 RGMPLS-DDVNLSTLADDTHGFVGADIESLSKEAAMRALRRY 411
Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 125/197 (63%), Gaps = 2/197 (1%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
+ +G+ P GVLL+GPPGTGKT +A+ A+++ N +V GP+++S+ GESE+A+ +
Sbjct: 488 FTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQT 547
Query: 381 FDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 439
F A Q AP V+F DELD++AP R + GG +S+R+V LL +DG+ + V+VIAATN
Sbjct: 548 FRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATN 607
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PAL R GR DR +++ P R +IL + D + L+ G+V
Sbjct: 608 RPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLA-ADVSLRELAERADGYV 666
Query: 500 GADLAALCNEAALVCLR 516
G+DLA + EAA+ LR
Sbjct: 667 GSDLANIAREAAIEALR 683
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 304 bits (779), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 140/254 (55%), Positives = 190/254 (74%), Gaps = 1/254 (0%)
Query: 614 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 673
LK+ + DF A ++PS +REV +EVPKV W D+GG VK QL EAVEWP + E F
Sbjct: 455 LKVSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFT 514
Query: 674 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 733
+ G PP GIL+FGPPG KT++A+AVA+E+G NF+AV+GPE+ SKWVGESEKA+R +F
Sbjct: 515 KSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFR 574
Query: 734 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 793
KAR AP++IFFDEID +A IRG +D V++R+++QLL E+DG+ V +IAATNR
Sbjct: 575 KARQAAPTVIFFDEIDSIAPIRGLSTDS-GVTERIVNQLLAEMDGIVPLNKVVIIAATNR 633
Query: 794 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGA 853
PD +DPALLRPGRFDRL+YV PP++T R EI ++H + +P + DV++ ++A +EG TGA
Sbjct: 634 PDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGA 693
Query: 854 DISLICREAAISAI 867
D+ + REA I+A+
Sbjct: 694 DLEALVREATINAM 707
Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 180/283 (63%), Gaps = 19/283 (6%)
Query: 626 MKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILM 685
+++R ++E L PKV WED+G E K ++ E VEWP +H E F+R+G PP GIL+
Sbjct: 192 IEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILL 251
Query: 686 FGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFF 745
+GPPG KTL+ARA+A+E G F+ V GPE+ SK+ GESE+ +R +F +A NAPSIIF
Sbjct: 252 YGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFI 311
Query: 746 DEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPG 805
DEID +A R E V RV++QLL +DG+ R V VI ATNRPD IDPAL RPG
Sbjct: 312 DEIDAIAPKR--EDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPG 369
Query: 806 RFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAIS 865
RFDR + + PP+ R++I ++H R +P + DV++ +LA ++ G TGAD++ + +EAAI
Sbjct: 370 RFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIY 429
Query: 866 AIEE-------NLDAS----------RITMQHLKTAIRHVQPS 891
A+ NLD +++M A++ +QPS
Sbjct: 430 ALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPS 472
Score = 216 bits (549), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
LG+ P KG+LL+GPPGTGKT LAR A++ G TVNGPE++S+ YGESEQ + E+
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREI 297
Query: 381 FDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNR 440
F A ++AP+++FIDE+DAIAP R+D E+ +R+VA LL LMDG+ V+VI ATNR
Sbjct: 298 FKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNR 357
Query: 441 PDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVG 500
PD+I+PALRRPGR DREIEI P R +IL M + D +++ L+ T+G+ G
Sbjct: 358 PDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPIT-DDVDLDKLAEMTYGYTG 416
Query: 501 ADLAALCNEAALVCLRRY 518
ADLAAL EAA+ LRR+
Sbjct: 417 ADLAALAKEAAIYALRRF 434
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 155/278 (55%), Gaps = 14/278 (5%)
Query: 243 SMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLS 302
++D + I E KV + LNA+ KS++ L +E V + + +GGL
Sbjct: 441 NLDQPTIPAEIIKELKVSMNDFLNAL-KSIQPSLLREVYVEVPKV------NWNDIGGLD 493
Query: 303 KEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVN 361
L++ + + G+ P KG+LL GPPGTGKT LA+ A +SG N V
Sbjct: 494 NVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVR 553
Query: 362 GPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR---KDGGEELSQRMVAT 418
GPE++S+ GESE+A+ E+F A Q+AP V+F DE+D+IAP R D G +++R+V
Sbjct: 554 GPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG--VTERIVNQ 611
Query: 419 LLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSG 478
LL MDG+ + V++IAATNRPD ++PAL RPGR DR I + P R EIL
Sbjct: 612 LLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKN 671
Query: 479 MEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
+ + D +E ++ G+ GADL AL EA + +R
Sbjct: 672 VPLA-EDVSLEDIAEKAEGYTGADLEALVREATINAMR 708
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 303 bits (775), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 144/295 (48%), Positives = 210/295 (71%), Gaps = 7/295 (2%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+LK+ L D E A + +RPSAMRE+ LE+PKV W D+GGQ E+KT++ E ++ P + E F
Sbjct: 483 SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
R+G P G+L++GPPGCSKTL A+A+A+E+G+NFLAVKGPE+F+K+VGESE+A+R +F
Sbjct: 543 ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602
Query: 733 AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 792
KAR+ APSIIFFDEID L+ R S S ++ V++ LL E+DG+ + V ++AATN
Sbjct: 603 RKARSAAPSIIFFDEIDALSPDRDGSS--TSAANHVLTSLLNEIDGVEELKGVVIVAATN 660
Query: 793 RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPC-SSDVNIRELACLSEGCT 851
RPD+ID ALLRPGR DR +YVGPP+ R EI + +K S V++ ELA +EG +
Sbjct: 661 RPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYS 720
Query: 852 GADISLICREAAISAIEENLDASRITMQHLKTAI----RHVQPSEIHSYKELSAK 902
GA++ L+C+EA ++AI E+LD +++ ++H + A R + P + Y+E + +
Sbjct: 721 GAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALR 775
Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/270 (44%), Positives = 171/270 (63%), Gaps = 20/270 (7%)
Query: 260 YLYPPLNAVSKSLREGTLPNAQIEF-QNVQATVEQDI------SKLGGLSKEYAILKDII 312
YL PP R+G+ I F + QA + ++ + +GGL KE LK I
Sbjct: 210 YLSPPF-----IFRKGS---THITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAI 261
Query: 313 -ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYG 371
I + SS G+ P +G+LLHGPPGTGKT L R+ A+ S ++ T+NGP +VS+ G
Sbjct: 262 EIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLG 321
Query: 372 ESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDGGEELSQRMVATLLNLMDGVCRTD 430
E+E AL ++F+ A + P+++FIDE+D+IAP R D E+ R+VATLL LMDG+
Sbjct: 322 ETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAG 381
Query: 431 GVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGM--EHSLLDSE- 487
V+VIAATNRP+S++PALRRPGR D+E+EI +P R +IL S M + +LDSE
Sbjct: 382 KVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEA 441
Query: 488 VEYLSMATHGFVGADLAALCNEAALVCLRR 517
++Y++ THG+VGADL ALC E+ + ++R
Sbjct: 442 IKYIASKTHGYVGADLTALCRESVMKTIQR 471
Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 28/314 (8%)
Query: 645 WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEA 704
+ VGG + L A+E P F G PP GIL+ GPPG KT++ R VA+ +
Sbjct: 244 YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTS 303
Query: 705 GLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSV 764
+ L + GP + SK++GE+E A+R +F +AR PSIIF DEID +A R + G V
Sbjct: 304 NAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG-EV 362
Query: 765 SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 824
RV++ LL +DG+ V VIAATNRP+ +DPAL RPGRFD+ + +G P+ R +I
Sbjct: 363 ESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDI 422
Query: 825 FRIHLRKIPCSSDV----NIRELACLSEGCTGADISLICREAAISAIEENL--DAS---- 874
++ V I+ +A + G GAD++ +CRE+ + I+ L DA+
Sbjct: 423 LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 482
Query: 875 --RITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNAEADESG 917
++T++ +++A+ ++P S+I +EL K + ++ EA E+
Sbjct: 483 SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542
Query: 918 YQLRPSKSIGSNMW 931
+L S G ++
Sbjct: 543 ARLGISAPKGVLLY 556
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 129/221 (58%), Gaps = 1/221 (0%)
Query: 296 SKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 354
S +GG + +K++I + T + LG+ KGVLL+GPPG KT A+ A +SG
Sbjct: 516 SDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESG 575
Query: 355 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQR 414
+N V GPE+ ++ GESE+A+ E+F A +AP+++F DE+DA++P R +
Sbjct: 576 INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANH 635
Query: 415 MVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHA 474
++ +LLN +DGV GV+++AATNRPD I+ AL RPGRLDR I + P RLEIL
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKK 695
Query: 475 LLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCL 515
++ L+ T G+ GA++ LC EA L +
Sbjct: 696 CTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI 736
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 290 bits (741), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 201/292 (68%), Gaps = 5/292 (1%)
Query: 620 DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 679
DF+ A + PS++REV++EVP V W+D+GG +VK ++ E VE P + FKR+G RP
Sbjct: 441 DFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRP 500
Query: 680 PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 739
G L++GPPG KTL+A+AVA+E+ NF+++KGPE+ SKWVGESEKA+R +F KA+ A
Sbjct: 501 SKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA 560
Query: 740 PSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 799
P+I+F DEID +A RG SD V++R+++QLL LDG+ V VI ATNRPD +DP
Sbjct: 561 PAIVFLDEIDSIAPRRGTTSDS-GVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDP 619
Query: 800 ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 859
ALLR GRFD+L+Y+ PP++ R I ++H + +P + DV++ ++A +EG GAD+ +C
Sbjct: 620 ALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLC 679
Query: 860 REAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLV 907
REA ++A EN DA+ ++ ++ A++ ++PS I Y+ LS + V
Sbjct: 680 REAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKSV 731
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 193/316 (61%), Gaps = 21/316 (6%)
Query: 598 VSDSSGGMFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQ 657
++ +G +F K K+ + E+ ++++R EV+ EV ++ +ED+GG E +
Sbjct: 142 LAGQTGLLFKVVKTLPSKVPVEIGEETKIEIREEPASEVLEEVSRISYEDIGGLSEQLGK 201
Query: 658 LMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELF 717
+ E +E P KH E F+R+G PP G++++GPPG KTL+ARAVA+E+G NFL++ GPE+
Sbjct: 202 IREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIM 261
Query: 718 SKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELD 777
SK+ G+SE+ +R +F+KA APSIIF DEID +A R +E G V RV++QLL +D
Sbjct: 262 SKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKR-EEVQG-EVERRVVAQLLTLMD 319
Query: 778 GLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-- 835
G+ +R +V VI ATNR D IDPAL RPGRFDR + +G P+ R+EI IH R +P
Sbjct: 320 GMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMS 379
Query: 836 ---SDVNIRELACLSEGCTGADISLICREAAISAIE--------------ENLDASRITM 878
+ + E+A + G GAD++ + RE+A++A+ E L+ +T
Sbjct: 380 EEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTE 439
Query: 879 QHLKTAIRHVQPSEIH 894
K A++ ++PS +
Sbjct: 440 DDFKNALKSIEPSSLR 455
Score = 220 bits (560), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 5/226 (2%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GGLS++ ++++I + LG+ P KGV+L+GPPGTGKT +AR A++SG N
Sbjct: 192 IGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGAN 251
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
++NGPE++S+ YG+SEQ L E+F A ++AP+++FIDE+D+IAP R++ E+ +R+V
Sbjct: 252 FLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVV 311
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
A LL LMDG+ V+VI ATNR D+I+PALRRPGR DREIEI VP R EIL
Sbjct: 312 AQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHT 371
Query: 477 SGMEHSLLDSE----VEYLSMATHGFVGADLAALCNEAALVCLRRY 518
M + + E +E ++ T+GFVGADLAAL E+A+ LRRY
Sbjct: 372 RNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRY 417
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 145/251 (57%), Gaps = 13/251 (5%)
Query: 270 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDIIISSSVK-STLSSLGLRP 328
KS+ +L +E NV +GGL +K+ + +K LG+RP
Sbjct: 447 KSIEPSSLREVMVEVPNVHW------DDIGGLEDVKREIKETVELPLLKPDVFKRLGIRP 500
Query: 329 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 388
+KG LL+GPPG GKT LA+ A +S N ++ GPEV+S+ GESE+A+ E+F A Q A
Sbjct: 501 SKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA 560
Query: 389 PAVVFIDELDAIAPAR---KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIE 445
PA+VF+DE+D+IAP R D G +++R+V LL +DG+ +GV+VI ATNRPD ++
Sbjct: 561 PAIVFLDEIDSIAPRRGTTSDSG--VTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMD 618
Query: 446 PALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAA 505
PAL R GR D+ I I P RL IL M + D ++ ++ T G+VGADL
Sbjct: 619 PALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLA-PDVDLNDIAQRTEGYVGADLEN 677
Query: 506 LCNEAALVCLR 516
LC EA + R
Sbjct: 678 LCREAGMNAYR 688
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 276 bits (705), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 212/349 (60%), Gaps = 28/349 (8%)
Query: 621 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 680
F+ A PSA+RE ++EVP V WED+GG VK +L E V++P +H E F++ G P
Sbjct: 456 FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
G+L +GPPGC KTL+A+A+A+E NF++VKGPEL + W GESE VR +F KAR +AP
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575
Query: 741 SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 799
++FFDE+D +A RG D +DRV++QLL E+DG+ + V +I ATNRPD IDP
Sbjct: 576 CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDP 635
Query: 800 ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 859
ALLRPGR D+L+Y+ P+E R +IF+ LRK P + +V++R LA ++G +GADI+ IC
Sbjct: 636 ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEIC 695
Query: 860 REAAISAIEENLD-------ASRITMQHLKTAIRHVQPSEIH-SYKELSAKFQRLVHSNA 911
+ A AI EN++ SR + + + +EI ++ E S KF R S +
Sbjct: 696 QRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFAR--RSVS 753
Query: 912 EADESGYQ-----LRPSKSIGSNMWTLIKSISLFLCRFPAGLSQSESGS 955
+AD YQ L+ S+ GS RFP ++ +GS
Sbjct: 754 DADIRKYQAFAQTLQQSRGFGSEF------------RFPESGDRTTTGS 790
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 163/268 (60%), Gaps = 17/268 (6%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++DVGG R+ Q+ E VE P +H + FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAPSIIF DEID +A R K
Sbjct: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL R +V VI ATNRP+ IDPAL R GRFDR + +G P+E R
Sbjct: 323 -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 872
E+ RIH + + S DV++ +A + G GAD++ +C EAA+ I E +D
Sbjct: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441
Query: 873 ------ASRITMQHLKTAIRHVQPSEIH 894
+ +T +H +TA+ PS +
Sbjct: 442 DAEVLNSMAVTNEHFQTALGTSNPSALR 469
Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 155/220 (70%), Gaps = 2/220 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG+ K+ A +++++ + S+G++P KG+LL+GPPG+GKT +AR A+++G
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++AP+++FIDE+D+IAP R+ E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+VI ATNRP+SI+PALRR GR DREI+I VP RLE+L
Sbjct: 330 SQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHT 389
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
M+ S D ++E ++ THG+VGADLAALC EAAL C+R
Sbjct: 390 KNMKLS-DDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 118/202 (58%), Gaps = 10/202 (4%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
G+ P+KGVL +GPPG GKT LA+ A++ N +V GPE+++ +GESE + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
Query: 381 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 436
FD A QSAP V+F DELD+IA R D G + R++ LL MDG+ V +I
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAG-GAADRVLNQLLTEMDGMSAKKTVFIIG 625
Query: 437 ATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 496
ATNRPD I+PAL RPGRLD+ I I +P R +I A L S + V+ ++A H
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACL---RKSPIAKNVDLRALARH 682
Query: 497 --GFVGADLAALCNEAALVCLR 516
GF GAD+ +C A +R
Sbjct: 683 TQGFSGADITEICQRACKYAIR 704
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 125/253 (49%), Positives = 177/253 (69%), Gaps = 1/253 (0%)
Query: 621 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 680
F+ A PSA+RE ++EVP V WED+GG VK +L E V++P +H E F++ G P
Sbjct: 456 FQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F KAR +AP
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 575
Query: 741 SIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 799
++FFDE+D +A RG D +DRV++QLL E+DG++ + V +I ATNRPD IDP
Sbjct: 576 CVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 635
Query: 800 ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 859
ALLRPGR D+L+Y+ P+E R +IF+ LRK P + DV++R LA ++G +GADI+ IC
Sbjct: 636 ALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEIC 695
Query: 860 REAAISAIEENLD 872
+ + AI EN++
Sbjct: 696 QRSCKYAIRENIE 708
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 163/268 (60%), Gaps = 17/268 (6%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++DVGG R+ Q+ E VE P +H + FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAPSIIF DEID +A R K
Sbjct: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E R
Sbjct: 323 -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 872
E+ RIH + + + DV++ ++ + G GAD++ +C EAA+ I E +D
Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEI 441
Query: 873 ------ASRITMQHLKTAIRHVQPSEIH 894
+ ++ H +TA+ + PS +
Sbjct: 442 DAEILNSMAVSNDHFQTALGNSNPSALR 469
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 155/220 (70%), Gaps = 2/220 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG+ K+ A +++++ + S+G++P KG+LL+GPPG+GKT +AR A+++G
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++AP+++FIDE+D+IAP R+ E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+V+ ATNRP+SI+PALRR GR DREI+I VP RLE+L
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 389
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
M+ + D ++E +S THG+VGADLAALC EAAL C+R
Sbjct: 390 KNMKLA-EDVDLERVSKDTHGYVGADLAALCTEAALQCIR 428
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 118/201 (58%), Gaps = 8/201 (3%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
G+ P+KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 566
Query: 381 FDSASQSAPAVVFIDELDAIAPARKD-----GGEELSQRMVATLLNLMDGVCRTDGVLVI 435
FD A QSAP V+F DELD+IA R + GG + R++ LL MDG+ V +I
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGNSVGDAGG--AADRVLNQLLTEMDGMNAKKTVFII 624
Query: 436 AATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT 495
ATNRPD I+PAL RPGRLD+ I I +P R +I + L + D ++ L+ T
Sbjct: 625 GATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVA-KDVDLRALAKYT 683
Query: 496 HGFVGADLAALCNEAALVCLR 516
GF GAD+ +C + +R
Sbjct: 684 QGFSGADITEICQRSCKYAIR 704
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 272 bits (696), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 177/253 (69%), Gaps = 1/253 (0%)
Query: 621 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 680
F+ A PSA+RE ++EVP V WED+GG VK +L E V++P + E F++ G P
Sbjct: 456 FQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPS 515
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
G+L +GPPGC KTL+A+A+A+E NF++VKGPEL + W GESE VR +F KAR +AP
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575
Query: 741 SIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 799
++FFDE+D +A RG S D +DRV++QLL E+DG++ + V +I ATNRPD IDP
Sbjct: 576 CVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP 635
Query: 800 ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 859
ALLRPGR D+L+Y+ P+E R +IF+ LRK P S D+++R LA ++G +GAD++ IC
Sbjct: 636 ALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEIC 695
Query: 860 REAAISAIEENLD 872
+ A AI EN++
Sbjct: 696 QRACKYAIRENIE 708
Score = 222 bits (566), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 162/268 (60%), Gaps = 17/268 (6%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++DVGG R+ Q+ E VE P +H + FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAPSIIF DEID +A R K
Sbjct: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG- 322
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E R
Sbjct: 323 -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 872
E+ IH + + + +V++ ++ + G GAD++ +C EAA+ I E +D
Sbjct: 382 LEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTI 441
Query: 873 ------ASRITMQHLKTAIRHVQPSEIH 894
+ +T +H +TA+ PS +
Sbjct: 442 DAEVLNSMAVTNEHFQTALGTSNPSALR 469
Score = 210 bits (534), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 155/220 (70%), Gaps = 2/220 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG+ K+ A +++++ + S+G++P KG+LL+GPPG+GKT +AR A+++G
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++AP+++FIDE+D+IAP R+ E+ +R+V
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIV 329
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+V+ ATNRP+SI+PALRR GR DREI+I VP RLE+L
Sbjct: 330 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHT 389
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
M+ + + ++E +S THG+VGADLAALC EAAL C+R
Sbjct: 390 KNMKLA-EEVDLERISKDTHGYVGADLAALCTEAALQCIR 428
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 119/202 (58%), Gaps = 10/202 (4%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
G+ P+KGVL +GPPG GKT LA+ A++ N +V GPE+++ +GESE + E+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
Query: 381 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 436
FD A QSAP V+F DELD+IA R D G + R++ LL MDG+ V +I
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSSGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 437 ATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 496
ATNRPD I+PAL RPGRLD+ I I +P R +I A L S L +++ ++A H
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACL---RKSPLSKDIDLRALAKH 682
Query: 497 --GFVGADLAALCNEAALVCLR 516
GF GAD+ +C A +R
Sbjct: 683 TQGFSGADVTEICQRACKYAIR 704
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 269 bits (688), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 204/324 (62%), Gaps = 16/324 (4%)
Query: 621 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 680
F A PSA+RE ++EVP V WED+GG VK +L E V++P +H E F++ G P
Sbjct: 455 FHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 514
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
G+L +GPPGC KTL+A+A+A+E NF++VKGPEL + W GESE VR +F KAR +AP
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 574
Query: 741 SIIFFDEIDGLAAIRGKES-DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDP 799
++FFDE+D +A RG + D +DRV++QLL E+DG++ + V +I ATNRPD ID
Sbjct: 575 CVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDS 634
Query: 800 ALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLIC 859
ALLRPGR D+L+Y+ P+E R IF+ LRK P + DV++ LA ++G +GADI+ IC
Sbjct: 635 ALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEIC 694
Query: 860 REAAISAIEENLDAS----RITMQH---LKTAIRHVQPSEIH-SYKELSAKFQRLVHSNA 911
+ A AI EN++ R Q+ ++ + + SEI ++ E S K+ R S +
Sbjct: 695 QRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYAR--RSVS 752
Query: 912 EADESGYQ-----LRPSKSIGSNM 930
+AD YQ L+ S+ GS
Sbjct: 753 DADIRKYQAFAQTLQQSRGFGSEF 776
Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 166/268 (61%), Gaps = 17/268 (6%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++DVGG R+ Q+ E VE P +H + FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 203 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAPSIIF DEID +A R K ++G
Sbjct: 263 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG 321
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E R
Sbjct: 322 -EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD--------- 872
E+ RIH + + + DV++ ++ + G GAD++ +C EAA+ I E +D
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 440
Query: 873 ------ASRITMQHLKTAIRHVQPSEIH 894
+ ++ +H TA+ + PS +
Sbjct: 441 DAEILNSMAVSNEHFHTALGNSNPSALR 468
Score = 213 bits (543), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 155/220 (70%), Gaps = 2/220 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG+ K+ A +++++ + S+G++P KG+LL+GPPG+GKT +AR A+++G
Sbjct: 209 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 268
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++AP+++FIDE+D+IAP R+ E+ +R+V
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 328
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+V+ ATNRP+SI+PALRR GR DREI+I VP RLE+L
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 388
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
M+ + D ++E +S THG+VGADLAALC EAAL C+R
Sbjct: 389 KNMKLA-EDVDLERISKDTHGYVGADLAALCTEAALQCIR 427
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 116/199 (58%), Gaps = 4/199 (2%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
G+ P+KGVL +GPPG GKT LA+ A++ N +V GPE+++ +GESE + E+
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 565
Query: 381 FDSASQSAPAVVFIDELDAIAPARKDGGEE---LSQRMVATLLNLMDGVCRTDGVLVIAA 437
FD A QSAP V+F DELD+IA R + + + R++ LL MDG+ V +I A
Sbjct: 566 FDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 625
Query: 438 TNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHG 497
TNRPD I+ AL RPGRLD+ I I +P RL I A L + D +V L+ T G
Sbjct: 626 TNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVA-KDVDVTALAKYTQG 684
Query: 498 FVGADLAALCNEAALVCLR 516
F GAD+ +C A +R
Sbjct: 685 FSGADITEICQRACKYAIR 703
>sp|P46463|PEX1_PICPA Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris GN=PEX1
PE=3 SV=1
Length = 1157
Score = 263 bits (671), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 292/567 (51%), Gaps = 68/567 (11%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAH---DSGVNLFTVNGPEVVSQNYGESEQAL 377
+ SL + G LL G G+GK+ + A + G + +N +++S++Y
Sbjct: 508 IESLSKIASGGSLLFGTSGSGKSLVISQVAQIVTNKGHFVKLLNCDKIMSESYNNLRGIF 567
Query: 378 HEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMVAT-LLNLMDGVCRTDGVLVIA 436
++F S AP+++ +++LD++ PA ++ + R ++ ++ + + ++A
Sbjct: 568 EDIFSEVSWKAPSLLILEDLDSLIPAEQEHSDSSQSRQLSEYFISKLSAQTINRDITILA 627
Query: 437 ATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYL---SM 493
++ +S+ + ++ + ++ P R +IL + L + ++ SE E L ++
Sbjct: 628 SSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTL--NVFCSEGELLNNIAV 685
Query: 494 ATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGTLFEFEGHSDTMLQDSDCSRN 553
T G++ DL LC+ A + R +L DSD +
Sbjct: 686 ETEGYLPKDLKVLCDRAYHDLISR-------------------------DILADSDSELD 720
Query: 554 ITESSRDCLDSASPCTSDLPTSLLSSSLPLRGTVSEIADN---FHNGVS------DSSGG 604
I ESS L+ G+V +IA+ NG+S +SS
Sbjct: 721 IEESSTPILN---------------------GSVGDIANKQSEIENGISGLELTNNSSST 759
Query: 605 MFMSEKGCALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEW 664
+ + + G ++ + +F+ A P ++R V L+ V+W+D+GG R+ K+ L+E +EW
Sbjct: 760 IAVDKHGATIQKD--NFDSALSGYIPQSLRGVKLQKSDVRWDDIGGLRDAKSILLETLEW 817
Query: 665 PQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 724
P K+ F R +GIL++G PGC KTL+A AVA++ GLNF+++KGPE+ +K++G S
Sbjct: 818 PTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPS 877
Query: 725 EKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN 784
E++VR LF +A+A P I+FFDE D +A RG +S G V+DRV++Q+L ++DG
Sbjct: 878 EQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTG--VTDRVVNQMLTQMDGAEGLDG 935
Query: 785 VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELA 844
V V+AAT+RPD ID ALLRPGR D+ + P+ DR +I + R + S VN+ +A
Sbjct: 936 VYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVA 995
Query: 845 CLSEGCTGADISLICREAAISAIEENL 871
G +GAD+ + A + A+ E L
Sbjct: 996 GECSGFSGADLQALAYNAYLKAVHEKL 1022
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 180/263 (68%), Gaps = 1/263 (0%)
Query: 612 CALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEA 671
+L + + +F A K PSA+RE ++EVP W D+GG VK +L E V++P +H +
Sbjct: 440 ASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDK 499
Query: 672 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 731
F + G +P G+L +GPPGC KTL+A+A+A+E NF++VKGPEL + W GESE VR +
Sbjct: 500 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDI 559
Query: 732 FAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 790
F KAR+ AP ++FFDE+D +A RG D +DRV++Q+L E+DG+ + NV +I A
Sbjct: 560 FDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGA 619
Query: 791 TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 850
TNRPD IDPA+LRPGR D+L+Y+ P++ RE I + +LRK P + +V++ +A +++G
Sbjct: 620 TNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGF 679
Query: 851 TGADISLICREAAISAIEENLDA 873
+GAD++ IC+ A AI + ++A
Sbjct: 680 SGADLTEICQRACKLAIRQAIEA 702
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 162/267 (60%), Gaps = 17/267 (6%)
Query: 643 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 702
V ++D+GG R+ Q+ E VE P +H FK IG +PP GILM+GPPG KTL+ARAVA+
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 703 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 762
E G F + GPE+ SK GESE +R F +A N+P+IIF DEID +A R K
Sbjct: 258 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHG-- 315
Query: 763 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 822
V R++SQLL +DG+ + ++ V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 316 EVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRL 375
Query: 823 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD---------- 872
E+ RIH + + DV++ ++A S G GAD++ +C EAA+ I E +D
Sbjct: 376 EVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKID 435
Query: 873 -----ASRITMQHLKTAIRHVQPSEIH 894
+ +TM++ + A+ PS +
Sbjct: 436 AEVLASLAVTMENFRYAMTKSSPSALR 462
Score = 206 bits (524), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 156/221 (70%), Gaps = 4/221 (1%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +K+++ + S ++G++P +G+L++GPPGTGKT +AR A+++G
Sbjct: 203 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAF 262
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A +++PA++FIDE+DAIAP R E+ +R+V
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIV 322
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ ++ ++V+AATNRP+SI+PALRR GR DREI+I +P RLE+L
Sbjct: 323 SQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHT 382
Query: 477 SGME-HSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
M+ H D ++E ++ +HG VGADLA+LC+EAAL +R
Sbjct: 383 KNMKLHD--DVDLEQIAAESHGHVGADLASLCSEAALQQIR 421
Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 133/237 (56%), Gaps = 12/237 (5%)
Query: 287 VQATVEQDISKLGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLA 346
V T DI L + KE L + K G++P++GVL +GPPG GKT LA
Sbjct: 468 VPNTTWTDIGGLESVKKELQELVQYPVEHPDK--FLKFGMQPSRGVLFYGPPGCGKTLLA 525
Query: 347 RLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-- 404
+ A++ N +V GPE+++ +GESE + ++FD A +AP V+F DELD+IA AR
Sbjct: 526 KAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGG 585
Query: 405 --KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAV 462
D G + R++ +L MDG+ V +I ATNRPD I+PA+ RPGRLD+ I I +
Sbjct: 586 NVGDAG-GAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 644
Query: 463 PSPAQRLEILHALLSGMEHSLLDSEVE--YLSMATHGFVGADLAALCNEAALVCLRR 517
P R IL A + S L EV+ Y++ T GF GADL +C A + +R+
Sbjct: 645 PDDKSREAILKA---NLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQ 698
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/261 (46%), Positives = 180/261 (68%), Gaps = 1/261 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + +F A K PSA+RE ++E P W D+GG + VK +L E V++P +H E +
Sbjct: 449 SLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKY 508
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G +P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 509 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF 568
Query: 733 AKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KARA AP ++FFDE+D +A RG D +DRV++Q+L E+DG++ + NV +I AT
Sbjct: 569 DKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGAT 628
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R +IF+ LRK P S+D+++ LA + G +
Sbjct: 629 NRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFS 688
Query: 852 GADISLICREAAISAIEENLD 872
GAD++ IC+ A AI E+++
Sbjct: 689 GADLTEICQRACKLAIRESIE 709
Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 177/317 (55%), Gaps = 34/317 (10%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H + FK IG +PP GIL+FGPPG KTL+ARAVA
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVA 264
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R FA+ N+P+I+F DEID +A R K
Sbjct: 265 NETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHG- 323
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL R +V VIAATNRP+ ID AL R GRFDR + +G P+ R
Sbjct: 324 -EVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 382
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN----------- 870
EI RIH + + DV++ ++A G GAD++ +C EAAI I E
Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTI 442
Query: 871 ----LDASRITMQHLKTAIRHVQP---------------SEIHSYKELSAKFQRLVHSNA 911
L++ +TM++ + A+ P S+I + + + Q LV
Sbjct: 443 DAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 502
Query: 912 EADES--GYQLRPSKSI 926
E E + ++PS+ +
Sbjct: 503 EHPEKYLKFGMQPSRGV 519
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 150/220 (68%), Gaps = 2/220 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
LGG+ K+ A +K+++ + ++G++P +G+LL GPPGTGKT +AR A+++G
Sbjct: 211 LGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAF 270
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F +++PA++FIDE+DAIAP R+ E+ +R+V
Sbjct: 271 FFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIV 330
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+VIAATNRP+SI+ ALRR GR DREI+I +P RLEIL
Sbjct: 331 SQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHT 390
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
M+ D ++E ++ HGFVGADLA+LC+EAA+ +R
Sbjct: 391 KNMKLG-EDVDLEQVANECHGFVGADLASLCSEAAIQQIR 429
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 122/198 (61%), Gaps = 6/198 (3%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G++P++GVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + +VFD
Sbjct: 510 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFD 569
Query: 383 SASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 438
A +AP V+F DELD+IA AR D G + R++ +L MDG+ V +I AT
Sbjct: 570 KARAAAPCVLFFDELDSIAKARGGSVGDAGGA-ADRVINQVLTEMDGMNAKKNVFIIGAT 628
Query: 439 NRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGF 498
NRPD I+PA+ RPGRLD+ I I +P A RL+I A L S D ++ +L+ T GF
Sbjct: 629 NRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLS-ADLDLNFLAKNTVGF 687
Query: 499 VGADLAALCNEAALVCLR 516
GADL +C A + +R
Sbjct: 688 SGADLTEICQRACKLAIR 705
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 192/311 (61%), Gaps = 22/311 (7%)
Query: 612 CALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEA 671
+LK+ +F A PS++RE +++ P VKW D+GG +VK +L E V++P ++ E
Sbjct: 447 ASLKVNSENFRYAIEHTDPSSLRETVIQSPNVKWSDIGGLEQVKQELRETVQYPVEYPEK 506
Query: 672 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 731
F + G P G+L +GPPGC KTL+A+AVA+E NF+++KGPEL S WVGESE +R L
Sbjct: 507 FIKFGMTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDL 566
Query: 732 FAKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
FA+AR AP ++FFDEID +A R +DR+++QLL E+DG++Q+ NV VI AT
Sbjct: 567 FARARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGAT 626
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD++D AL+RPGR D+L+Y+ P+ R I + L+K P S ++++R+LA ++ +
Sbjct: 627 NRPDQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLSPEIDLRQLAEATDKFS 686
Query: 852 GADISLICREAAISAIEENLD--------ASRIT--------------MQHLKTAIRHVQ 889
GAD+S IC+ A AI E ++ S + +Q LKTA R V
Sbjct: 687 GADLSEICQRACKLAIRETIEYELEQKKKGSEMMDLEDPVPYLRPDHLVQSLKTARRSVS 746
Query: 890 PSEIHSYKELS 900
E+ Y+ +
Sbjct: 747 EKEVERYEAFA 757
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/275 (43%), Positives = 165/275 (60%), Gaps = 17/275 (6%)
Query: 635 EVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 694
EV E V ++DVGG R ++ E VE P +H + + +IG +PP GIL++GPPG KT
Sbjct: 197 EVEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKT 256
Query: 695 LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 754
L+ARA+A+E G + GPE+ SK GESE +R F +A N+P+IIF DEID LA
Sbjct: 257 LIARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPK 316
Query: 755 RGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVG 814
R K S G V R++SQLL +DG+ R NV V+ ATNRP+ IDPAL R GRFDR + +G
Sbjct: 317 REK-SQG-EVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIG 374
Query: 815 PPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL--- 871
P+ET R EI RIH + + S DV++ + G TG+D++ +C EAA+ I E L
Sbjct: 375 VPDETGRLEILRIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQI 434
Query: 872 -------DAS-----RITMQHLKTAIRHVQPSEIH 894
DA ++ ++ + AI H PS +
Sbjct: 435 DLDSEKIDAKVLASLKVNSENFRYAIEHTDPSSLR 469
Score = 206 bits (525), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 152/220 (69%), Gaps = 2/220 (0%)
Query: 298 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG + A +++++ S L S +G++P KG+LL+GPPGTGKT +AR A+++G
Sbjct: 210 VGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAF 269
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
LF +NGPE++S+ GESE L + F+ A +++PA++FIDE+DA+AP R+ E+ +R+V
Sbjct: 270 LFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVERRIV 329
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+V+ ATNRP+SI+PALRR GR DREIEI VP RLEIL
Sbjct: 330 SQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEILRIHT 389
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
M+ S D ++ ++ HGF G+DLA+LC+EAAL +R
Sbjct: 390 KNMKMS-EDVDLVAINKELHGFTGSDLASLCSEAALQQIR 428
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 156/297 (52%), Gaps = 29/297 (9%)
Query: 226 KLPA-DLTNERSQPQVTESMDHESNAFVINHETKVYLYPPLNAVSKSLREGTLPNAQIEF 284
KLP DL +E+ +V S+ +N E + Y + SLRE + + +++
Sbjct: 430 KLPQIDLDSEKIDAKVLASLK-------VNSEN--FRYAIEHTDPSSLRETVIQSPNVKW 480
Query: 285 QNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKT 343
S +GGL + L++ + G+ P KGVL +GPPG GKT
Sbjct: 481 -----------SDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKT 529
Query: 344 SLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPA 403
LA+ A + N ++ GPE++S GESE + ++F A +AP V+F DE+D+IA A
Sbjct: 530 LLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKA 589
Query: 404 R--KDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIA 461
R DG + RM+ LL+ MDG+ + V VI ATNRPD ++ AL RPGRLD+ + I
Sbjct: 590 RSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIP 649
Query: 462 VPSPAQRLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLR 516
+P R+ IL A L + + L E++ L+ AT F GADL+ +C A + +R
Sbjct: 650 LPDLDSRVSILQATL---KKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKLAIR 703
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 179/263 (68%), Gaps = 2/263 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREV-ILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEA 671
+L + + +F A PSA+REV ++EVP V+WED+GG EVK +L+E+V++P H E
Sbjct: 465 SLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEK 524
Query: 672 FKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSL 731
F++ G P G+L +GPPG KT++A+AVA+E NF++VKGPEL S W GESE +R +
Sbjct: 525 FQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDI 584
Query: 732 FAKARANAPSIIFFDEIDGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 790
F KARA AP ++F DE+D +A RG D SDRV++QLL E+DG+ + NV VI A
Sbjct: 585 FDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGA 644
Query: 791 TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 850
TNRP+++D AL+RPGR D L+YV P++ RE I + LRK P +SDV+I +A + G
Sbjct: 645 TNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGF 704
Query: 851 TGADISLICREAAISAIEENLDA 873
+GAD+ + + A AI+E++ A
Sbjct: 705 SGADLGFVTQRAVKLAIKESISA 727
Score = 226 bits (575), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 153/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H + FK IG +PP GILM+GPPG KTLMARAVA
Sbjct: 221 EVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 280
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A N+P+IIF DEID +A R K ++G
Sbjct: 281 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK-TNG 339
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V RV+SQLL +DG+ R NV V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 340 -EVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGR 398
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI IH + + DV++ +A + G G+D++ +C EAA+ I E +D
Sbjct: 399 LEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMD 449
Score = 209 bits (532), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 163/246 (66%), Gaps = 8/246 (3%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +++++ + S+G++P +G+L++GPPGTGKT +AR A+++G
Sbjct: 227 IGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAF 286
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A +++PA++FIDE+D+IAP R+ E+ +R+V
Sbjct: 287 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVV 346
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+V+AATNRP+SI+PALRR GR DRE++I +P P RLEIL
Sbjct: 347 SQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHT 406
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI------QTSSDVLHS 530
M+ D ++E ++ THG+VG+DLA+LC+EAA+ +R + ++VL S
Sbjct: 407 KNMKLG-EDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDS 465
Query: 531 TGTLFE 536
G E
Sbjct: 466 LGVTME 471
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 121/200 (60%), Gaps = 6/200 (3%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
GL P++GVL +GPPGTGKT LA+ A++ N +V GPE++S +GESE + ++
Sbjct: 525 FQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDI 584
Query: 381 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 436
FD A +AP VVF+DELD+IA +R D G S R+V LL MDG+ V VI
Sbjct: 585 FDKARAAAPCVVFLDELDSIAKSRGGSVGDAG-GASDRVVNQLLTEMDGMTSKKNVFVIG 643
Query: 437 ATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 496
ATNRP+ ++ AL RPGRLD + + +P A R IL A L + D ++E+++ TH
Sbjct: 644 ATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVA-SDVDIEFIASKTH 702
Query: 497 GFVGADLAALCNEAALVCLR 516
GF GADL + A + ++
Sbjct: 703 GFSGADLGFVTQRAVKLAIK 722
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 181/261 (69%), Gaps = 1/261 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + DF A + PSA+RE ++EVP+V WED+GG +VK +L E V++P +H + F
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Query: 733 AKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KAR AP ++FFDE+D +A R G DG +DRV++Q+L E+DG+ + NV +I AT
Sbjct: 564 DKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGAT 623
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R I + +LRK P + DV++ LA ++ G +
Sbjct: 624 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFS 683
Query: 852 GADISLICREAAISAIEENLD 872
GAD++ IC+ A AI E+++
Sbjct: 684 GADLTEICQRACKLAIRESIE 704
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DE+D +A R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG- 318
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL QR +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 319 -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI +IH + + S DV++ ++A + G GAD++ +C EAA+ AI + +D
Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428
Score = 213 bits (542), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 157/221 (71%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +K+++ + + ++G++P +G+LL+GPPGTGKT +AR A+++G
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++APA++FIDELDAIAP R+ E+ +R+V
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIV 325
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ + V+V+AATNRP+SI+PALRR GR DRE++I +P RLEIL
Sbjct: 326 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHT 385
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M+ S D ++E ++ THG VGADLAALC+EAAL +R+
Sbjct: 386 KNMKLS-DDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 122/197 (61%), Gaps = 4/197 (2%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G+ P+KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+FD
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIAATN 439
A Q+AP V+F DELD+IA AR + + R++ +L MDG+ V +I ATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATN 624
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PA+ RPGRLD+ I I +P R+ IL A L + D +V++L+ T+GF
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVA-KDVDVDFLAKMTNGFS 683
Query: 500 GADLAALCNEAALVCLR 516
GADL +C A + +R
Sbjct: 684 GADLTEICQRACKLAIR 700
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 179/259 (69%), Gaps = 1/259 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + DF A + PSA+RE ++EVP+V WED+GG +VK +L E V++P +H + F
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Query: 733 AKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KAR AP ++FFDE+D +A R G DG +DRV++Q+L E+DG+ + NV +I AT
Sbjct: 564 DKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R I + +LRK P + DV++ LA ++ G +
Sbjct: 624 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFS 683
Query: 852 GADISLICREAAISAIEEN 870
GAD++ IC+ A AI E+
Sbjct: 684 GADLTEICQRACKLAIRES 702
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DE+D +A R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG- 318
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL QR +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 319 -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI +IH + + S DV++ ++A + G GAD++ +C EAA+ AI + +D
Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428
Score = 213 bits (542), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 157/221 (71%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +K+++ + + ++G++P +G+LL+GPPGTGKT +AR A+++G
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++APA++FIDELDAIAP R+ E+ +R+V
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIV 325
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ + V+V+AATNRP+SI+PALRR GR DRE++I +P RLEIL
Sbjct: 326 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHT 385
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M+ S D ++E ++ THG VGADLAALC+EAAL +R+
Sbjct: 386 KNMKLS-DDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 122/197 (61%), Gaps = 4/197 (2%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G+ P+KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+FD
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIAATN 439
A Q+AP V+F DELD+IA AR + + R++ +L MDG+ V +I ATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PA+ RPGRLD+ I I +P R+ IL A L + D ++++L+ T+GF
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVA-KDVDLDFLAKMTNGFS 683
Query: 500 GADLAALCNEAALVCLR 516
GADL +C A + +R
Sbjct: 684 GADLTEICQRACKLAIR 700
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 257 bits (657), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 177/258 (68%), Gaps = 1/258 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + DF A + PSA+RE ++EVP + WED+GG +VK +L E V++P +H + F
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKF 503
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Query: 733 AKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KAR AP ++FFDE+D +A R G DG +DRV++Q+L E+DG+ + NV +I AT
Sbjct: 564 DKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGAT 623
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R I + +LRK P S DV++ LA ++ G +
Sbjct: 624 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFS 683
Query: 852 GADISLICREAAISAIEE 869
GAD++ IC+ A AI E
Sbjct: 684 GADLTEICQRACKLAIRE 701
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 200 EVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DE+D +A R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG- 318
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL QR +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 319 -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI +IH + + + DV++ ++A + G GAD++ +C EAA+ AI + +D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 158/221 (71%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG+ K+ A +K+++ + + ++G++P +G+LL+GPPGTGKT +AR A+++G
Sbjct: 206 IGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++APA++FIDELDAIAP R+ E+ +R+V
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIV 325
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ + V+V+AATNRP+SI+PALRR GR DRE++I +P RLEIL
Sbjct: 326 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 385
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M+ + D ++E ++ THG VGADLAALC+EAAL +R+
Sbjct: 386 KNMKLA-DDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 122/197 (61%), Gaps = 4/197 (2%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G+ P+KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+FD
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIAATN 439
A Q+AP V+F DELD+IA AR + + R++ +L MDG+ V +I ATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATN 624
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PA+ RPGRLD+ I I +P R+ IL A L S D ++++L+ T+GF
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPIS-KDVDLDFLAKMTNGFS 683
Query: 500 GADLAALCNEAALVCLR 516
GADL +C A + +R
Sbjct: 684 GADLTEICQRACKLAIR 700
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 256 bits (655), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/254 (49%), Positives = 173/254 (68%), Gaps = 2/254 (0%)
Query: 621 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 680
F A PSA+RE ++EVP V W D+GG VK +L E V++P +H E F++ G P
Sbjct: 455 FHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 514
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
G+L +GPPGC KTL+A+A+A+E NF++VKGPEL + W GESE VR +F KAR +AP
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 574
Query: 741 SIIFFDEIDGLAAIR--GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKID 798
++FFDE+D +A R G DG +DRV++QLL E+DG++ + V +I ATNRPD ID
Sbjct: 575 CVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 634
Query: 799 PALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLI 858
ALLRPGR D+L+Y+ P+E R IF+ LRK P + DV+I LA ++G +GADI+ I
Sbjct: 635 SALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEI 694
Query: 859 CREAAISAIEENLD 872
C+ A AI EN++
Sbjct: 695 CQRACKYAIRENIE 708
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 165/267 (61%), Gaps = 17/267 (6%)
Query: 643 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 702
V ++DVGG R+ Q+ E VE P +H + FK IG +PP GIL++GPPG KTL+ARAVA+
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 703 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 762
E G F + GPE+ SK GESE +R F +A NAPSIIF DEID +A R K ++G
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-TNG- 321
Query: 763 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 822
V R++SQLL +DGL R +V V+ ATNRP+ IDPAL R GRFDR + +G P+E R
Sbjct: 322 EVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRL 381
Query: 823 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD---------- 872
E+ RIH + + + DV++ ++ + G GAD++ +C EAA+ I E +D
Sbjct: 382 EVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSID 441
Query: 873 -----ASRITMQHLKTAIRHVQPSEIH 894
+ +T +H TA+ + PS +
Sbjct: 442 AEILNSMAVTNEHFHTALGNSNPSALR 468
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 155/220 (70%), Gaps = 2/220 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG+ K+ A +++++ + S+G++P KG+LL+GPPG+GKT +AR A+++G
Sbjct: 209 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 268
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++AP+++FIDE+D+IAP R+ E+ +R+V
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIV 328
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ V+V+ ATNRP+SI+PALRR GR DREI+I VP RLE+L
Sbjct: 329 SQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHT 388
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
M+ + D ++E +S THG+VGADLAALC EAAL C+R
Sbjct: 389 KNMKLA-EDVDLERISKDTHGYVGADLAALCTEAALQCIR 427
Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 115/200 (57%), Gaps = 5/200 (2%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
G+ P+KGVL +GPPG GKT LA+ A++ N +V GPE+++ +GESE + E+
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 565
Query: 381 FDSASQSAPAVVFIDELDAIAPAR----KDGGEELSQRMVATLLNLMDGVCRTDGVLVIA 436
FD A QSAP V+F DELD+IA R G + R++ LL MDG+ V +I
Sbjct: 566 FDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 437 ATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH 496
ATNRPD I+ AL RPGRLD+ I I +P RL I A L + D ++ L+ T
Sbjct: 626 ATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIA-KDVDIGALAKYTQ 684
Query: 497 GFVGADLAALCNEAALVCLR 516
GF GAD+ +C A +R
Sbjct: 685 GFSGADITEICQRACKYAIR 704
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 1/251 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + DF A + PSA+RE ++EVP+V WED+GG +VK +L E V++P +H + F
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Query: 733 AKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KAR AP ++FFDE+D +A R G DG +DRV++Q+L E+DG+ + NV +I AT
Sbjct: 564 DKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R I + +LRK P + DV++ LA ++ G +
Sbjct: 624 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFS 683
Query: 852 GADISLICREA 862
GAD++ IC+ A
Sbjct: 684 GADLTEICQRA 694
Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DE+D +A R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG- 318
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL QR +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 319 -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI +IH + + + DV++ ++A + G GAD++ +C EAA+ AI + +D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 157/221 (71%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +K+++ + + ++G++P +G+LL+GPPGTGKT +AR A+++G
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++APA++FIDELDAIAP R+ E+ +R+V
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIV 325
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ + V+V+AATNRP+SI+PALRR GR DRE++I +P RLEIL
Sbjct: 326 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 385
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M+ + D ++E ++ THG VGADLAALC+EAAL +R+
Sbjct: 386 KNMKLA-DDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G+ P+KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+FD
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIAATN 439
A Q+AP V+F DELD+IA AR + + R++ +L MDG+ V +I ATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PA+ RPGRLD+ I I +P R+ IL A L + D ++E+L+ T+GF
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFS 683
Query: 500 GADLAALCNEA 510
GADL +C A
Sbjct: 684 GADLTEICQRA 694
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 1/251 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + DF A + PSA+RE ++EVP+V WED+GG +VK +L E V++P +H + F
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Query: 733 AKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KAR AP ++FFDE+D +A R G DG +DRV++Q+L E+DG+ + NV +I AT
Sbjct: 564 DKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R I + +LRK P + DV++ LA ++ G +
Sbjct: 624 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFS 683
Query: 852 GADISLICREA 862
GAD++ IC+ A
Sbjct: 684 GADLTEICQRA 694
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DE+D +A R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG- 318
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL QR +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 319 -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI +IH + + + DV++ ++A + G GAD++ +C EAA+ AI + +D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 157/221 (71%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +K+++ + + ++G++P +G+LL+GPPGTGKT +AR A+++G
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++APA++FIDELDAIAP R+ E+ +R+V
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIV 325
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ + V+V+AATNRP+SI+PALRR GR DRE++I +P RLEIL
Sbjct: 326 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 385
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M+ + D ++E ++ THG VGADLAALC+EAAL +R+
Sbjct: 386 KNMKLA-DDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G+ P+KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+FD
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIAATN 439
A Q+AP V+F DELD+IA AR + + R++ +L MDG+ V +I ATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PA+ RPGRLD+ I I +P R+ IL A L + D ++E+L+ T+GF
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFS 683
Query: 500 GADLAALCNEA 510
GADL +C A
Sbjct: 684 GADLTEICQRA 694
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate
3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/251 (45%), Positives = 170/251 (67%), Gaps = 1/251 (0%)
Query: 621 FEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPP 680
F+ A PS++RE +++P V W D+GG EVK QL E + +P +++ + + +
Sbjct: 909 FQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYN 968
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
GIL++GPPGC KTL+A+A+A+E NF++VKGPEL + W GESE VR LF KARA +P
Sbjct: 969 KGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASP 1028
Query: 741 SIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 800
IIFFDEID LA R ++ SDRV++Q+L E+DG++++ + +IAATNRPD +D A
Sbjct: 1029 CIIFFDEIDSLAKERNSNTNN-DASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKA 1087
Query: 801 LLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICR 860
L RPGR D+L+Y+ P+ R IF+ L+ P + DV+I ++A +EG +GADI+ +C+
Sbjct: 1088 LTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQ 1147
Query: 861 EAAISAIEENL 871
A AI+E +
Sbjct: 1148 SAVNEAIKETI 1158
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/251 (44%), Positives = 158/251 (62%), Gaps = 10/251 (3%)
Query: 271 SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPT 329
+L E L E N T E LGG+ K+ ++++I + S+G+
Sbjct: 506 TLAEEYLKREDYEENNDDITYED----LGGMKKQLNKIRELIELPLKYPEIFMSIGISAP 561
Query: 330 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 389
KGVL+HG PGTGKTS+A+ A++S + +NGPE++S++ GESEQ L ++F AS+ P
Sbjct: 562 KGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTP 621
Query: 390 AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALR 449
++FIDE+D+IA R EL +R+V+ LL LMDG+ + + VLV+AATNRP+SI+PALR
Sbjct: 622 CIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALR 681
Query: 450 RPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMAT--HGFVGADLAALC 507
R GR DREIEI VP R EI LL+ + LD +V +A HG+VGADLA LC
Sbjct: 682 RFGRFDREIEIPVPDEQGRYEI---LLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLC 738
Query: 508 NEAALVCLRRY 518
EAA+ C++ +
Sbjct: 739 FEAAIQCIKEH 749
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 144/229 (62%), Gaps = 2/229 (0%)
Query: 643 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 702
+ +ED+GG ++ ++ E +E P K+ E F IG P G+LM G PG KT +A+A+A+
Sbjct: 524 ITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 703 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 762
E+ + GPE+ SK +GESE+ +R +F KA P IIF DEID +A R K ++
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNN-- 641
Query: 763 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 822
+ RV+SQLL +DGL + NV V+AATNRP+ IDPAL R GRFDR + + P+E R
Sbjct: 642 ELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRY 701
Query: 823 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 871
EI +K+ DVN+R++A G GAD++ +C EAAI I+E++
Sbjct: 702 EILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHI 750
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 129/218 (59%), Gaps = 7/218 (3%)
Query: 298 LGGLSKEYAILKDIIISS-SVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG+++ LK+ I+ K + KG+LL+GPPG GKT LA+ A++ N
Sbjct: 936 IGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKAN 995
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARK-DGGEELSQRM 415
+V GPE+++ +GESE + ++FD A ++P ++F DE+D++A R + + S R+
Sbjct: 996 FISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRV 1055
Query: 416 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHAL 475
+ +L +DG+ + +IAATNRPD ++ AL RPGRLD+ I I++P R I A+
Sbjct: 1056 INQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAI 1115
Query: 476 LSGMEHSLLDSEVEYLSMA--THGFVGADLAALCNEAA 511
L +++ L+ +V+ MA T GF GAD+ LC A
Sbjct: 1116 L---KNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAV 1150
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 1/251 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + DF A + PSA+RE ++EVP+V WED+GG +VK +L E V++P +H + F
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Query: 733 AKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KAR AP ++FFDE+D +A R G DG +DRV++Q+L E+DG+ + NV +I AT
Sbjct: 564 DKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R I + +LRK P + DV++ LA ++ G +
Sbjct: 624 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFS 683
Query: 852 GADISLICREA 862
GAD++ IC+ A
Sbjct: 684 GADLTEICQRA 694
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DE+D +A R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG- 318
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL QR +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 319 -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI +IH + + + DV++ ++A + G GAD++ +C EAA+ AI + +D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 157/221 (71%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +K+++ + + ++G++P +G+LL+GPPGTGKT +AR A+++G
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++APA++FIDELDAIAP R+ E+ +R+V
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIV 325
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ + V+V+AATNRP+SI+PALRR GR DRE++I +P RLEIL
Sbjct: 326 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 385
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M+ + D ++E ++ THG VGADLAALC+EAAL +R+
Sbjct: 386 KNMKLA-DDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G+ P+KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+FD
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIAATN 439
A Q+AP V+F DELD+IA AR + + R++ +L MDG+ V +I ATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PA+ RPGRLD+ I I +P R+ IL A L + D ++E+L+ T+GF
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFS 683
Query: 500 GADLAALCNEA 510
GADL +C A
Sbjct: 684 GADLTEICQRA 694
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 1/251 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + DF A + PSA+RE ++EVP+V WED+GG +VK +L E V++P +H + F
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKF 503
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Query: 733 AKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KAR AP ++FFDE+D +A R G DG +DRV++Q+L E+DG+ + NV +I AT
Sbjct: 564 DKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R I + +LRK P + DV++ LA ++ G +
Sbjct: 624 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFS 683
Query: 852 GADISLICREA 862
GAD++ IC+ A
Sbjct: 684 GADLTEICQRA 694
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DE+D +A R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG- 318
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL QR +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 319 -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI +IH + + + DV++ ++A + G GAD++ +C EAA+ AI + +D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 157/221 (71%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +K+++ + + ++G++P +G+LL+GPPGTGKT +AR A+++G
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++APA++FIDELDAIAP R+ E+ +R+V
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIV 325
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ + V+V+AATNRP+SI+PALRR GR DRE++I +P RLEIL
Sbjct: 326 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 385
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M+ + D ++E ++ THG VGADLAALC+EAAL +R+
Sbjct: 386 KNMKLA-DDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G+ P+KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+FD
Sbjct: 505 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD 564
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIAATN 439
A Q+AP V+F DELD+IA AR + + R++ +L MDG+ V +I ATN
Sbjct: 565 KARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN 624
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RPD I+PA+ RPGRLD+ I I +P R+ IL A L + D ++E+L+ T+GF
Sbjct: 625 RPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFS 683
Query: 500 GADLAALCNEA 510
GADL +C A
Sbjct: 684 GADLTEICQRA 694
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/251 (47%), Positives = 175/251 (69%), Gaps = 1/251 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + DF A + PSA+RE ++EVP+V WED+GG +VK +L + V++P +H + F
Sbjct: 444 SLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKF 503
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 504 LKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 563
Query: 733 AKARANAPSIIFFDEIDGLAAIR-GKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAAT 791
KAR AP ++FFDE+D +A R G DG +DRV++Q+L E+DG+ + NV +I AT
Sbjct: 564 DKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGAT 623
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD IDPA+LRPGR D+L+Y+ P+E R I + +LRK P + DV++ LA ++ G +
Sbjct: 624 NRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFS 683
Query: 852 GADISLICREA 862
GAD++ IC+ A
Sbjct: 684 GADLTEICQRA 694
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 154/231 (66%), Gaps = 2/231 (0%)
Query: 642 KVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVA 701
+V ++D+GG R+ Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 702 SEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDG 761
+E G F + GPE+ SK GESE +R F +A NAP+IIF DE+D +A R K
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHG- 318
Query: 762 VSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDR 821
V R++SQLL +DGL QR +V V+AATNRP+ IDPAL R GRFDR + +G P+ T R
Sbjct: 319 -EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 822 EEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI +IH + + + DV++ ++A + G GAD++ +C EAA+ AI + +D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 157/221 (71%), Gaps = 2/221 (0%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GG K+ A +K+++ + + ++G++P +G+LL+GPPGTGKT +AR A+++G
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPE++S+ GESE L + F+ A ++APA++FIDELDAIAP R+ E+ +R+V
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIV 325
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDG+ + V+V+AATNRP+SI+PALRR GR DRE++I +P RLEIL
Sbjct: 326 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 385
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRR 517
M+ + D ++E ++ THG VGADLAALC+EAAL +R+
Sbjct: 386 KNMKLA-DDVDLEQVANETHGHVGADLAALCSEAALQAIRK 425
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 138/244 (56%), Gaps = 16/244 (6%)
Query: 271 SLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRPT 329
+LRE + Q+ ++++ GGL L+D++ G+ P+
Sbjct: 463 ALRETVVEVPQVTWEDI-----------GGLEDVKRELQDLVQYPVEHPDKFLKFGMTPS 511
Query: 330 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 389
KGVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + E+FD A Q+AP
Sbjct: 512 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 571
Query: 390 AVVFIDELDAIAPARKDGGEEL---SQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEP 446
V+F DELD+IA AR + + R++ +L MDG+ V +I ATNRPD I+P
Sbjct: 572 CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDP 631
Query: 447 ALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAAL 506
A+ RPGRLD+ I I +P R+ IL A L + D ++E+L+ T+GF GADL +
Sbjct: 632 AILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFSGADLTEI 690
Query: 507 CNEA 510
C A
Sbjct: 691 CQRA 694
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 179/262 (68%), Gaps = 2/262 (0%)
Query: 613 ALKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
+L + + +F A+ K PSA+RE ++E P W D+GG + VK +L E V++P +H E +
Sbjct: 450 SLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKY 509
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ G +P G+L +GPPGC KTL+A+A+A+E NF+++KGPEL + W GESE VR +F
Sbjct: 510 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF 569
Query: 733 AKARANAPSIIFFDEIDGL--AAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAA 790
KARA AP ++FFDE+D + A G DG SDRV++Q+L E+DG++ + NV +I A
Sbjct: 570 DKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGA 629
Query: 791 TNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGC 850
TNRPD IDPA+LRPGR D+L+Y+ P+E R +I + LRK P S D+++ LA + G
Sbjct: 630 TNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGF 689
Query: 851 TGADISLICREAAISAIEENLD 872
+GAD++ IC+ A AI E+++
Sbjct: 690 SGADLTEICQRACKLAIRESIE 711
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 150/230 (65%), Gaps = 2/230 (0%)
Query: 643 VKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVAS 702
+ ++D+GG R+ Q+ E VE P +H + FK IG +PP GIL+FGPPG KTL+ARAVA+
Sbjct: 207 IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVAN 266
Query: 703 EAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKESDGV 762
E G F + GPE+ SK GESE +R F + N P+I+F DEID +A R K ++G
Sbjct: 267 ETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREK-TNG- 324
Query: 763 SVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDRE 822
V R++SQLL +DG+ R N+ VIAATNRP+ ID AL R GRFDR + +G P+ R
Sbjct: 325 EVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRL 384
Query: 823 EIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLD 872
EI RIH + + + DV++ ++A G GAD++ +C EAA+ I E ++
Sbjct: 385 EILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKME 434
Score = 206 bits (523), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 161/246 (65%), Gaps = 8/246 (3%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
LGG+ K+ A +K+++ + ++G++P +G+LL GPPGTGKT +AR A+++G
Sbjct: 212 LGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSF 271
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEELSQRMV 416
F +NGPEV+S+ GESE L + F+ ++ PA++FIDE+DAIAP R+ E+ +R+V
Sbjct: 272 FFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVERRIV 331
Query: 417 ATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALL 476
+ LL LMDGV ++VIAATNRP+SI+ ALRR GR DREI+I +P RLEIL
Sbjct: 332 SQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHT 391
Query: 477 SGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKI------QTSSDVLHS 530
M+ + D ++E ++ HGFVGADLA+LC+EAAL +R ++ Q ++VL+S
Sbjct: 392 KNMKLA-DDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNS 450
Query: 531 TGTLFE 536
E
Sbjct: 451 LAVTME 456
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 118/198 (59%), Gaps = 5/198 (2%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
G++P++GVL +GPPG GKT LA+ A++ N ++ GPE+++ +GESE + +VFD
Sbjct: 511 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFD 570
Query: 383 SASQSAPAVVFIDELDAI----APARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAAT 438
A +AP V+F DELD+I G S R++ +L MDG+ V +I AT
Sbjct: 571 KARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGAT 630
Query: 439 NRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGF 498
NRPD I+PA+ RPGRLD+ I I +P A R +IL A L S D ++ +L+ T GF
Sbjct: 631 NRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLS-KDLDLTFLAKNTVGF 689
Query: 499 VGADLAALCNEAALVCLR 516
GADL +C A + +R
Sbjct: 690 SGADLTEICQRACKLAIR 707
>sp|Q9ZPR1|CD48B_ARATH Cell division control protein 48 homolog B OS=Arabidopsis thaliana
GN=CDC48B PE=2 SV=1
Length = 603
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 191/292 (65%), Gaps = 6/292 (2%)
Query: 620 DFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRP 679
DF+ A+ V PS R + +E+PKV W+DVGG +++K +L +AVEWP KH AF ++G P
Sbjct: 260 DFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISP 319
Query: 680 PTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 739
GIL+ GPPGCSKT +A+A A+ A +F ++ ELFS +VGE E +R+ F +AR +
Sbjct: 320 MRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLAS 379
Query: 740 PSIIFFDEIDGLAAIRGKE--SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKI 797
PSIIFFDE D +A RG E S+ +V +R++S LL E+DGL + + V+AATNRP I
Sbjct: 380 PSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAI 439
Query: 798 DPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISL 857
D AL+RPGRFD +LYV PP+ R EI ++H R + DV++R++A ++ TGA++
Sbjct: 440 DAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEG 499
Query: 858 ICREAAISAIEENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQR 905
+CRE+ ++ EN+ A+ + +H +TA ++P+ E+ +Y +R
Sbjct: 500 LCRESGTVSLRENIAATAVFNRHFQTAKSSLKPALTIEEVETYSSFRKAAKR 551
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 140/260 (53%), Gaps = 17/260 (6%)
Query: 644 KWE---DVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 700
KW ++GG L E + +P ++ + +G + P G+L++GPPG KT + RAV
Sbjct: 17 KWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAV 76
Query: 701 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA----PSIIFFDEIDGLAAIRG 756
E + + + + GESEK +R FA+A ++A PS+IF DEID L R
Sbjct: 77 VQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRD 136
Query: 757 --KESDGVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLL 811
+E D R+ SQL +D + V V+A+TNR D IDPAL R GRFD L+
Sbjct: 137 ARREQDV-----RIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALV 191
Query: 812 YVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENL 871
V PNE DR +I +++ +K+ V+++ +A G GAD+ +CREA ISA + +
Sbjct: 192 EVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSS 251
Query: 872 DASRITMQHLKTAIRHVQPS 891
D+ +T Q K A V PS
Sbjct: 252 DSLILTSQDFKIAKSVVGPS 271
Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 137/243 (56%), Gaps = 16/243 (6%)
Query: 296 SKLGGLSKEYAILKDIIISS-SVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSG 354
+++GG + L+++II +LGL+ +G+LL+GPPGTGKTSL R +
Sbjct: 22 AEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECD 81
Query: 355 VNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA----PAVVFIDELDAIAPARKDGGEE 410
+L ++ V + GESE+ L E F AS A P+V+FIDE+D + P R+D E
Sbjct: 82 AHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCP-RRDARRE 140
Query: 411 LSQRMVATLLNLMDG---VCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQ 467
R+ + L LMD V+V+A+TNR D+I+PALRR GR D +E++ P+
Sbjct: 141 QDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEED 200
Query: 468 RLEILHALLSGMEHSLLDSEVEY--LSMATHGFVGADLAALCNEAALVCLRRYSK--IQT 523
RL+IL + LD V+ ++++ +G+VGADL ALC EA + +R S I T
Sbjct: 201 RLKILQLYTKKVN---LDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILT 257
Query: 524 SSD 526
S D
Sbjct: 258 SQD 260
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 121/230 (52%), Gaps = 13/230 (5%)
Query: 324 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 383
+G+ P +G+LLHGPPG KT+LA+ A+ + + F+++ E+ S GE E L F
Sbjct: 315 MGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQR 374
Query: 384 ASQSAPAVVFIDELDAIAPARKD----GGEELSQRMVATLLNLMDGVCRTDGVLVIAATN 439
A ++P+++F DE D +A R D + +R+++TLL MDG+ G+LV+AATN
Sbjct: 375 ARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATN 434
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFV 499
RP +I+ AL RPGR D + + P R EIL M D ++ ++ T F
Sbjct: 435 RPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLG-DDVDLRKIAEETDLFT 493
Query: 500 GADLAALCNEAALVCLRR--------YSKIQTSSDVLHSTGTLFEFEGHS 541
GA+L LC E+ V LR QT+ L T+ E E +S
Sbjct: 494 GAELEGLCRESGTVSLRENIAATAVFNRHFQTAKSSLKPALTIEEVETYS 543
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/277 (44%), Positives = 173/277 (62%), Gaps = 11/277 (3%)
Query: 616 LELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRI 675
L +VD R AM + E P V++ED+GG + ++ E VE P KH E F+++
Sbjct: 142 LTVVDVLPENKDYRAKAME--VDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKV 199
Query: 676 GTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKA 735
G PP GIL++GPPG KTL+A+AVA+E F+ V G EL K++GE V+ +F A
Sbjct: 200 GIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLA 259
Query: 736 RANAPSIIFFDEIDGLAAIRGKESDGVSVSD----RVMSQLLVELDGLHQRVNVTVIAAT 791
+ APSIIF DEID +AA K +D ++ D R + QLL E+DG R +V +I AT
Sbjct: 260 KEKAPSIIFIDEIDAIAA---KRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGAT 316
Query: 792 NRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCT 851
NRPD +DPA+LRPGRFDR++ V P+E R EI +IH RK+ + DVN+ E+A ++EGC
Sbjct: 317 NRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCV 376
Query: 852 GADISLICREAAISAIEENLDASRITMQHLKTAIRHV 888
GA++ IC EA ++AI E D +TM + A+ +
Sbjct: 377 GAELKAICTEAGMNAIRELRDY--VTMDDFRKAVEKI 411
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 130/233 (55%), Gaps = 5/233 (2%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GGL K+ +++++ + +G+ P KG+LL+GPPGTGKT LA+ A ++
Sbjct: 172 IGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNAT 231
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD---GGEELSQ 413
V G E+V + GE + ++F A + AP+++FIDE+DAIA R D GG+ Q
Sbjct: 232 FIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQ 291
Query: 414 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILH 473
R + LL MDG V +I ATNRPD ++PA+ RPGR DR IE+ P RLEIL
Sbjct: 292 RTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILK 351
Query: 474 ALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSD 526
M + D +E ++ T G VGA+L A+C EA + +R T D
Sbjct: 352 IHTRKMNLA-EDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDD 403
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 196/341 (57%), Gaps = 25/341 (7%)
Query: 585 GTVSEIADNFHNGVSDSSGGMFMS-----------EKGCALKLE-----LVDFEKARMKV 628
GTV EI D+ V S+G F+S E G + L +VD +
Sbjct: 104 GTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDS 163
Query: 629 RPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGP 688
R AM + E P V ++D+GG E ++ E VE P K E F+++G PP G+L++GP
Sbjct: 164 RVLAME--VDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGP 221
Query: 689 PGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEI 748
PG KTL+A+AVA+ A F+ + PEL K++GE + VR LF AR APSIIF DEI
Sbjct: 222 PGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEI 281
Query: 749 DGLAAIRGKE-SDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRF 807
D + A R ++ + G R ++QLL E+DG ++ VIAATNR D +DPALLRPGRF
Sbjct: 282 DAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRF 341
Query: 808 DRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI 867
DR + + P+E R EIF+IH R + + DV++++LA ++EG +GADI IC EA + AI
Sbjct: 342 DRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAI 401
Query: 868 EENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLVH 908
E+ D +TM A+ V + +E S +F+R H
Sbjct: 402 REDRDI--VTMDDFLKAVDRV----MGKKEEESGEFKRAYH 436
Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 136/238 (57%), Gaps = 5/238 (2%)
Query: 298 LGGLSKEYAILKDIIISSSVKSTL-SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GGL ++ +++++ + L +G+ P KGVLL+GPPGTGKT LA+ A+ +
Sbjct: 181 IGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADAT 240
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPAR-KDG--GEELSQ 413
+ PE+V + GE + + E+F+ A + AP+++FIDE+DAI R +D G+ Q
Sbjct: 241 FIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQ 300
Query: 414 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILH 473
R + LL MDG D + VIAATNR D ++PAL RPGR DR I+I +P R EI
Sbjct: 301 RTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFK 360
Query: 474 ALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHST 531
M + D +++ L+ T G GAD+ A+C EA ++ +R I T D L +
Sbjct: 361 IHTRDMNLA-EDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAV 417
>sp|D4GUJ7|PAN1_HALVD Proteasome-activating nucleotidase 1 OS=Haloferax volcanii (strain
ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB
2012 / VKM B-1768 / DS2) GN=pan1 PE=2 SV=2
Length = 406
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 165/264 (62%), Gaps = 4/264 (1%)
Query: 641 PKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAV 700
P V +ED+GG E ++ E VE P E F +G PP+G+L++GPPG KT++A+AV
Sbjct: 145 PDVTYEDIGGLEEQMQEVRETVEMPLDRPEMFAEVGIDPPSGVLLYGPPGTGKTMLAKAV 204
Query: 701 ASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIR-GKES 759
A++ +F+ + G EL K++GE K VR LF AR N P++IF DEID +A+ R ++
Sbjct: 205 ANQTNASFIKMAGSELVHKFIGEGAKLVRDLFEVARENEPAVIFIDEIDAIASKRTDSKT 264
Query: 760 DGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNET 819
G + R M QLL E+DG +R N+ +IAATNR D +DPA+LRPGRFDRL+ V PNE
Sbjct: 265 SGDAEVQRTMMQLLAEMDGFDERGNIRIIAATNRFDMLDPAILRPGRFDRLIEVPKPNED 324
Query: 820 DREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQ 879
RE IF+IH RK+ S DV+ ELA +++ +GADI +C EA + AI + D + I MQ
Sbjct: 325 GREIIFQIHTRKMNVSDDVDFVELAEMADNASGADIKAVCTEAGMFAIRD--DRTEIFMQ 382
Query: 880 HLKTAIRHVQPSEIHSYKELSAKF 903
A +Q E E+S F
Sbjct: 383 DFVDAWEKIQ-QEASDETEVSRAF 405
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 191/387 (49%), Gaps = 27/387 (6%)
Query: 143 LSSQSVNQLASPVSEDSVSKSLNWNSLNVDAFDIKEVLEDESAIKLLQTCAASWLYSRSL 202
+ + +V+ + P +DS S+ +L + ++ E +E KLL T A + Y + L
Sbjct: 1 MMTDTVDDVDLPYDKDSASQQEKITALQ-ERLEVLETQNEEMRDKLLDTNAENNKYQQKL 59
Query: 203 ---------LCGNLVAVPMLSEISIFLVIGANKLPADLTNERSQPQVTESMDHESNAFVI 253
L + + V + EI+ VI + N+ + +VT+ M E +
Sbjct: 60 ERLTHENKKLKQSPLFVATVQEITDEGVI----IKQHGNNQEALTEVTDEMREE-----L 110
Query: 254 NHETKVYLYPPLNAVSKSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII- 312
+ +V + L+ V + +E + ++ ++ +DI GGL ++ +++ +
Sbjct: 111 EPDARVAVNNSLSIVKRLDKETDVRARVMQVEHSPDVTYEDI---GGLEEQMQEVRETVE 167
Query: 313 ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGE 372
+ + +G+ P GVLL+GPPGTGKT LA+ A+ + + + G E+V + GE
Sbjct: 168 MPLDRPEMFAEVGIDPPSGVLLYGPPGTGKTMLAKAVANQTNASFIKMAGSELVHKFIGE 227
Query: 373 SEQALHEVFDSASQSAPAVVFIDELDAIAPARKD---GGEELSQRMVATLLNLMDGVCRT 429
+ + ++F+ A ++ PAV+FIDE+DAIA R D G+ QR + LL MDG
Sbjct: 228 GAKLVRDLFEVARENEPAVIFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLAEMDGFDER 287
Query: 430 DGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVE 489
+ +IAATNR D ++PA+ RPGR DR IE+ P+ R I M S VE
Sbjct: 288 GNIRIIAATNRFDMLDPAILRPGRFDRLIEVPKPNEDGREIIFQIHTRKMNVSDDVDFVE 347
Query: 490 YLSMATHGFVGADLAALCNEAALVCLR 516
MA + GAD+ A+C EA + +R
Sbjct: 348 LAEMADNA-SGADIKAVCTEAGMFAIR 373
>sp|Q9BVQ7|SPA5L_HUMAN Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens
GN=SPATA5L1 PE=1 SV=2
Length = 753
Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 194/321 (60%), Gaps = 29/321 (9%)
Query: 619 VDFEKARMKVRPSAMREVI--LEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIG 676
+DF +A ++PS+ R VI +++ V WE++GG +VK +L +++EWP K F R+G
Sbjct: 435 IDFLEAFKNIQPSSFRSVIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMG 494
Query: 677 TRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKAR 736
P G+L++GPPGC+KT + RA+A+ +F++V G +LFS +VG+SEK + +F +AR
Sbjct: 495 LTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQAR 554
Query: 737 ANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRV------------- 783
A+ P+I+F DEID + R G V +RV+S LL ELDG+ +
Sbjct: 555 ASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEF 614
Query: 784 ------NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSD 837
+V +IAATNRPD +D ALLRPGR D+++Y+ PP+ R I ++ + +P D
Sbjct: 615 QEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPD 674
Query: 838 VNIRELACLSEGCTGADISLICREAAISAIEEN-LDASRITMQHLKTAIRHVQPS----E 892
V++ LA + +GAD+ +C EAA+ A++EN LDA+ + +H +++ V+PS +
Sbjct: 675 VSLENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPSLSCKD 734
Query: 893 IHSYKELSAKFQRLVHSNAEA 913
+ Y+ L F++ SN E
Sbjct: 735 LALYENL---FKKEGFSNVEG 752
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 144/254 (56%), Gaps = 10/254 (3%)
Query: 648 VGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLN 707
+GG E L E + P ++ A +G P G+L+ GPPG KT + RAVA EAG
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 708 FLAVKGPELFSKWVGESEKAVRSLFAKAR---ANAPSIIFFDEIDGLAAIRGKESDGVSV 764
LAV P L GE+E+ VR +F +AR + PS++F DE+D L RG +
Sbjct: 262 LLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRAP---- 317
Query: 765 SDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEI 824
RV++Q+L LDG V V+ ATNRPD +DPAL RPGRFDR + +G P R+EI
Sbjct: 318 ESRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEI 377
Query: 825 FRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI---EENLDASRITMQHL 881
++ K+P SS V++ LA ++ G GAD++ +CREAA+ A+ E+N D I
Sbjct: 378 LQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLHSEKNQDNPVIDEIDF 437
Query: 882 KTAIRHVQPSEIHS 895
A +++QPS S
Sbjct: 438 LEAFKNIQPSSFRS 451
Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Query: 321 LSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEV 380
L++LGL +GVLL GPPG GKT L R A ++G L V+ P + GE+E+ + V
Sbjct: 226 LTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRV 285
Query: 381 FDSASQSA---PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAA 437
F A + A P+++F+DE+DA+ P R G R+VA +L L+DG V+V+ A
Sbjct: 286 FQRARELASRGPSLLFLDEMDALCPQR--GSRAPESRVVAQVLTLLDGASGDREVVVVGA 343
Query: 438 TNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHG 497
TNRPD+++PALRRPGR DRE+ I P+ QR EIL + S M S ++ L+ T G
Sbjct: 344 TNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPIS-SHVDLGLLAEMTVG 402
Query: 498 FVGADLAALCNEAALVCLRRYSKIQ 522
+VGADL ALC EAA+ L K Q
Sbjct: 403 YVGADLTALCREAAMHALLHSEKNQ 427
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 117/214 (54%), Gaps = 22/214 (10%)
Query: 324 LGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDS 383
+GL KGVLL+GPPG KT+L R A + +V+G ++ S G+SE+ L ++F
Sbjct: 493 MGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQ 552
Query: 384 ASQSAPAVVFIDELDAIAPAR--KDGGEELSQRMVATLLNLMDGV--------------- 426
A S PA++F+DE+D+I AR G ++ +R+++ LLN +DGV
Sbjct: 553 ARASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQ 612
Query: 427 ----CRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHS 482
V++IAATNRPD ++ AL RPGRLD+ I I P RL IL M
Sbjct: 613 EFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIG 672
Query: 483 LLDSEVEYLSMATHGFVGADLAALCNEAALVCLR 516
D +E L+ T F GADL LC EAAL+ L+
Sbjct: 673 -PDVSLENLAAETCFFSGADLRNLCTEAALLALQ 705
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 172/259 (66%), Gaps = 3/259 (1%)
Query: 614 LKLELVDFEKARMKVRPSAMREVILEVPK-VKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
L L DF+KA P+++R V L P+ + W+ +GG EV+ LM+ ++ P K+ E F
Sbjct: 808 LTLTTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELF 867
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ R TGIL++GPPG KTL+A VA E+G+NF+++KGPEL SK++G SE+AVR +F
Sbjct: 868 ANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVF 927
Query: 733 AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 792
+A+A P I+FFDE + +A RG ++ G V+DRV++QLL +LDG+ V V+AAT+
Sbjct: 928 IRAQAAKPCILFFDEFESIAPRRGHDNTG--VTDRVVNQLLTQLDGVEGLQGVYVLAATS 985
Query: 793 RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 852
RPD IDPALLRPGR D+ +Y PP++ R EI + + + + DV+++ +A +++ TG
Sbjct: 986 RPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTG 1045
Query: 853 ADISLICREAAISAIEENL 871
AD+ + A + A++ L
Sbjct: 1046 ADLKALLYNAQLEALQGRL 1064
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 146/248 (58%), Gaps = 4/248 (1%)
Query: 270 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 328
K+LR G LP A + N+ + K+GGL + IL D I + + ++L +R
Sbjct: 817 KALR-GFLP-ASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQ 874
Query: 329 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 388
G+LL+GPPGTGKT LA + A +SG+N ++ GPE++S+ G SEQA+ +VF A +
Sbjct: 875 RTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAK 934
Query: 389 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPAL 448
P ++F DE ++IAP R ++ R+V LL +DGV GV V+AAT+RPD I+PAL
Sbjct: 935 PCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 994
Query: 449 RRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 508
RPGRLD+ + P RLEIL L + + D ++++++ T F GADL AL
Sbjct: 995 LRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALA-DDVDLQHVASVTDSFTGADLKALLY 1053
Query: 509 EAALVCLR 516
A L L+
Sbjct: 1054 NAQLEALQ 1061
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 325 GLRPTKGVLLHGPPGTGKTSLAR-LC--AHDS-GVNLFTVNGPEVVSQNYGESEQALHEV 380
GLR +L+ G G+GK++ A+ +C A D+ + TV+ + + ++AL
Sbjct: 590 GLR-NGALLITGGKGSGKSTFAKAICKEAQDTLDARVETVDCKALRGKRLESIQKALEVA 648
Query: 381 FDSASQSAPAVVFIDELDAIA-----PARKDGGEELSQRMVATLLNLMDGVCRTDGVLV- 434
F A+ P+V+ +D+LD IA P ++ E + + +A LN M + G LV
Sbjct: 649 FSEAAWRQPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEFVSTGSLVA 708
Query: 435 -IAATNRPDSIEPALRRPGRLDR---EIEIAVPSPAQRLEILHALLS---GMEHS-LLDS 486
IA + S+ P+L + + P+P QR EILH+++ G + S D
Sbjct: 709 LIATSQLQQSLHPSLVSAQGIHTFQCVQHLQPPNPEQRCEILHSVVKNKLGCDISNFPDL 768
Query: 487 EVEYLSMATHGFVGADLAALCNEA 510
+++ ++ T FV D L + A
Sbjct: 769 DLQCIAKDTEAFVARDFTVLVDRA 792
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Query: 682 GILMFGPPGCSKTLMARAVASEAGLNFLA----VKGPELFSKWVGESEKAVRSLFAKARA 737
+L+ G G K+ A+A+ EA A V L K + +KA+ F++A
Sbjct: 595 ALLITGGKGSGKSTFAKAICKEAQDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAW 654
Query: 738 NAPSIIFFDEID---GLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVN----VTVIAA 790
PS+I D++D GL ++ +E +V + ++ L D + + V+ V +IA
Sbjct: 655 RQPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALN--DMIKEFVSTGSLVALIAT 712
Query: 791 TNRPDKIDPALLRPG---RFDRLLYVGPPNETDREEIFRIHLR-KIPCS----SDVNIRE 842
+ + P+L+ F + ++ PPN R EI ++ K+ C D++++
Sbjct: 713 SQLQQSLHPSLVSAQGIHTFQCVQHLQPPNPEQRCEILHSVVKNKLGCDISNFPDLDLQC 772
Query: 843 LACLSEGCTGADISLICREA 862
+A +E D +++ A
Sbjct: 773 IAKDTEAFVARDFTVLVDRA 792
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 229 bits (584), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 170/255 (66%), Gaps = 3/255 (1%)
Query: 614 LKLELVDFEKARMKVRPSAMREVILEVPK-VKWEDVGGQREVKTQLMEAVEWPQKHQEAF 672
L L +DF+KA P+++R V L P+ + W+ +GG EV+ LM+ ++ P K+ E F
Sbjct: 807 LVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELF 866
Query: 673 KRIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLF 732
+ R TGIL++GPPG KTL+A +A E+ +NF++VKGPEL SK++G SE+AVR +F
Sbjct: 867 ANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIF 926
Query: 733 AKARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATN 792
+A+A P I+FFDE + +A RG ++ G V+DRV++QLL +LDG+ V V+AAT+
Sbjct: 927 IRAQAAKPCILFFDEFESIAPRRGHDNTG--VTDRVVNQLLTQLDGVEGLQGVYVLAATS 984
Query: 793 RPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTG 852
RPD IDPALLRPGR D+ +Y PP++ R EI + +P + DV+++ +A +++ TG
Sbjct: 985 RPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTG 1044
Query: 853 ADISLICREAAISAI 867
AD+ + A + A+
Sbjct: 1045 ADLKALLYNAQLEAL 1059
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 145/247 (58%), Gaps = 4/247 (1%)
Query: 270 KSLREGTLPNAQIEFQNVQATVEQDISKLGGLSKEYAILKDII-ISSSVKSTLSSLGLRP 328
K+LR G LP A + N+ + K+GGL + IL D I + + ++L +R
Sbjct: 816 KALR-GFLP-ASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQ 873
Query: 329 TKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSA 388
G+LL+GPPGTGKT LA + A +S +N +V GPE++S+ G SEQA+ ++F A +
Sbjct: 874 RTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAK 933
Query: 389 PAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPAL 448
P ++F DE ++IAP R ++ R+V LL +DGV GV V+AAT+RPD I+PAL
Sbjct: 934 PCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 993
Query: 449 RRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCN 508
RPGRLD+ + P RLEIL+ L + + D ++++++ T F GADL AL
Sbjct: 994 LRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLA-DDVDLQHVASVTDSFTGADLKALLY 1052
Query: 509 EAALVCL 515
A L L
Sbjct: 1053 NAQLEAL 1059
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 325 GLRPTKGVLLHGPPGTGKTSLAR---------LCAHDSGVNLFTVNGPEVVSQNYGESEQ 375
GLR +LL G G+GK++LA+ L AH V+ + G + +N ++
Sbjct: 589 GLR-NGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRL--ENI---QK 642
Query: 376 ALHEVFDSASQSAPAVVFIDELDAIA-----PARKDGGEELSQRMVATLLNLMDGVCRTD 430
L F A P+VV +D+LD IA P + + + + +A LN M +
Sbjct: 643 TLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISM 702
Query: 431 GVLV--IAATNRPDSIEPAL--RRPGRLDREIE-IAVPSPAQRLEILHALLSGME----H 481
G LV IA + S+ P L + + + ++ I P+ QR EIL ++ +
Sbjct: 703 GSLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDIN 762
Query: 482 SLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYS 519
D ++++++ T GFV D L + A L R S
Sbjct: 763 KFTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQS 800
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6
PE=1 SV=1
Length = 941
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 177/289 (61%), Gaps = 25/289 (8%)
Query: 639 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKTLMAR 698
+VP VKW+DVGG +VKT +++ V+ P H++ F G R +G+L++GPPG KTL+A+
Sbjct: 651 KVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 709
Query: 699 AVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGKE 758
AVA+E LNFL+VKGPEL + ++GESEK VR +F KAR+ P +IFFDE+D LA RG
Sbjct: 710 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGAS 769
Query: 759 SDGVSVSDRVMSQLLVELDGLHQRV-NVTVIAATNRPDKIDPALLRPGRFDRLLYVG-PP 816
D V DRV+SQ+L E+DGL ++ +I A+NRPD IDPALLRPGRFD+LLYVG
Sbjct: 770 GDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNA 829
Query: 817 NETDREEIFRIHLRKIPCSSDVNIRELA--CLSEGCTGADISLICREAAISAI------- 867
+ + RE + + RK S DV++ +A C S TGAD+ +C +A A
Sbjct: 830 DASYRERVLKALTRKFKLSEDVSLYSVAKKCPST-FTGADMYALCADAWFQAAKRKVSKS 888
Query: 868 --------EENLDASRITMQHLKTAIRHVQPS----EIHSYKELSAKFQ 904
E++ D+ + A+ + PS E+ Y+ L +FQ
Sbjct: 889 DSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQ 937
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 10/237 (4%)
Query: 298 LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 357
+GGL + D + + L S GLR GVLL+GPPGTGKT LA+ A + +N
Sbjct: 660 VGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF 719
Query: 358 FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRM 415
+V GPE+++ GESE+ + ++F+ A + P V+F DELD++APAR G+ + R+
Sbjct: 720 LSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRV 779
Query: 416 VATLLNLMDGVC-RTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQ-RLEILH 473
V+ +L +DG+ + + +I A+NRPD I+PAL RPGR D+ + + V + A R +L
Sbjct: 780 VSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLK 839
Query: 474 ALLSGMEHSLLDSEVEYLSMATH---GFVGADLAALCNEAALVCLRRYSKIQTSSDV 527
AL + L +V S+A F GAD+ ALC +A +R S D+
Sbjct: 840 ALTRKFK---LSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDM 893
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 322 SSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVF 381
S+L + VLLHG PG GK ++ + A G+++ + +++ + ++ AL + F
Sbjct: 370 SALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTF 429
Query: 382 DSASQSAPAVVFIDELDAIAP-ARKDG--GEE--LSQRMVATLLNLMDGVCRTDG----- 431
+ A + +P ++ + D +DG G+ +S + + + L + V D
Sbjct: 430 NMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDSSMEEK 489
Query: 432 -----------------VLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHA 474
VL+IA+ + I P +RR EI + + QR E+L
Sbjct: 490 SNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRRC--FSHEIRMGSLNDEQRSEMLSQ 547
Query: 475 LLSGMEHSLLDSEVEY---LSMATHGFVGADLAALCNEA-ALVCLRRYS---KIQTSSDV 527
L G+ L S E+ L T GF+ DL AL +A A + + + S KI + SD
Sbjct: 548 SLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDD 607
Query: 528 LH 529
LH
Sbjct: 608 LH 609
Score = 38.9 bits (89), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 681 TGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 740
+L+ G PGC K + + VA GL+ + L + ++ A+ F AR +P
Sbjct: 378 VAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSP 437
Query: 741 SIIF---FDEIDGLAAIRGKESDGVSVSDRVMS 770
+I+ FD L + G D V VS + S
Sbjct: 438 TILLLRHFDVFKNLGSQDGSLGDRVGVSFEIAS 470
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 175/289 (60%), Gaps = 29/289 (10%)
Query: 639 EVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKR-IGTRPPTGILMFGPPGCSKTLMA 697
++P V W+DVGG VK+++M+ ++ P +H F IG R +GIL+FGPPG KTL+A
Sbjct: 912 KIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASGIGKR--SGILLFGPPGTGKTLLA 969
Query: 698 RAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAIRGK 757
+A+A+E LNFL+VKGPEL + ++GESEK +R +F KAR P +IFFDE+D LA RG
Sbjct: 970 KAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGN 1029
Query: 758 ESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPN 817
+D V DRV+SQLL ELDG+ + +V +I ATNRPD +D +L+RPGR DRLLY+G +
Sbjct: 1030 GADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISS 1089
Query: 818 ETDRE-EIFRIHLRKIPCSSDVNIRELACLSEGC----TGADISLICREAAISAIEENLD 872
E + + +I + RK + DV++R++ E C TGAD + +A +A E +
Sbjct: 1090 EKENQFKILQALTRKFNLADDVDLRKVV---ENCPMNLTGADFYALASDAMSNAFHERIT 1146
Query: 873 AS--------------RITMQHLKTAIRHVQPS----EIHSYKELSAKF 903
AS + H A+ + PS E+ Y ++ +F
Sbjct: 1147 ASINGEINEEEQNQKLIVYQNHFIKAVNSLVPSVSLDELEYYHKVQKQF 1195
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 128/219 (58%), Gaps = 9/219 (4%)
Query: 298 LGGLSKEYAILKDIIISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNL 357
+GGL+ + + D I L + G+ G+LL GPPGTGKT LA+ A + +N
Sbjct: 921 VGGLANVKSEIMDTIQLPLEHPHLFASGIGKRSGILLFGPPGTGKTLLAKAIATECSLNF 980
Query: 358 FTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKDGGEE--LSQRM 415
+V GPE+++ GESE+ + E+F+ A Q+ P V+F DELD++AP+R +G + + R+
Sbjct: 981 LSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRV 1040
Query: 416 VATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQ-RLEILHA 474
V+ LL +DG+ ++ V +I ATNRPD ++ +L RPGRLDR + + + S + + +IL A
Sbjct: 1041 VSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQA 1100
Query: 475 LLSGMEHSLLDSEVEYLSMATH---GFVGADLAALCNEA 510
L L +V+ + + GAD AL ++A
Sbjct: 1101 LTRKFN---LADDVDLRKVVENCPMNLTGADFYALASDA 1136
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 332 VLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAV 391
+LL+GP G GK +L A G++++ V+ ++ + + + V + AS S P +
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 392 VFIDELDAIAPARKDGGEE-----LSQRMVATLLNLMD----GVCRTDGVLVIAAT-NRP 441
+ + + + + +E LSQ ++ L ++ D + L+I T N
Sbjct: 730 LILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDINDSNTSNINSNKYPLIITVTVNSM 789
Query: 442 DSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDS-EVEYLSMATHGFVG 500
D + +R EI + P QR +IL L + + ++ ++ LS+ T F+
Sbjct: 790 DELSNKVR--NWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNLSIRTASFLN 847
Query: 501 ADLAALCNEAALVCLRRYSKIQ 522
++L AL +++ L+R IQ
Sbjct: 848 SNLRALIQRSSINALKRVLSIQ 869
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 226 bits (577), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/317 (43%), Positives = 188/317 (59%), Gaps = 21/317 (6%)
Query: 614 LKLELVDFEKARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFK 673
L +++ DFE+A V+ S RE VP VKW+DVGG ++ Q + P K + +K
Sbjct: 496 LFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYK 555
Query: 674 RIGTRPPTGILMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFA 733
G TG L++GPPGC KTL+A+A A+EAG NF+ +KG EL +K+VGESE A+R+LF
Sbjct: 556 AFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQ 615
Query: 734 KARANAPSIIFFDEIDGLAAIRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNR 793
+AR AP +IFFDE+D L RGKE G V +R+++Q LVELDG +R NV VI ATNR
Sbjct: 616 RARTCAPCVIFFDEVDALTTSRGKE--GAWVVERLLNQFLVELDG-GERRNVYVIGATNR 672
Query: 794 PDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS-EGCTG 852
PD +DPA LRPGRF LLYV PN +R I + RK P V++ +A + EG +G
Sbjct: 673 PDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSG 732
Query: 853 ADISLICREAAISAIEENLDASR-------------ITMQHLKTAIRHVQPS----EIHS 895
AD++ + ++A A+EE + +S I +H + A+ V PS +
Sbjct: 733 ADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRH 792
Query: 896 YKELSAKFQRLVHSNAE 912
Y LS K Q V N E
Sbjct: 793 YDALSTKLQESVGRNTE 809
Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 143/251 (56%), Gaps = 15/251 (5%)
Query: 638 LEVPKVK---WEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPPGCSKT 694
LEV K ++D GG +++ +L V +P + E FK+IG +PP+GIL GPPGC KT
Sbjct: 222 LEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKT 281
Query: 695 LMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAAI 754
+A A+A+EAG+ F + E+ S G SE+ +R LF+KA APSI+F DEID + +
Sbjct: 282 KLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSK 341
Query: 755 RGKESDGVSVSDRVMSQLLVELDGLHQRVN----------VTVIAATNRPDKIDPALLRP 804
R E+ + R+++QLL +DG + + V VI ATNRPD +DPAL R
Sbjct: 342 R--ENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRS 399
Query: 805 GRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAI 864
GRF+ + + P+E R EI + +K+ + + +A L+ G GAD+ + A
Sbjct: 400 GRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGR 459
Query: 865 SAIEENLDASR 875
AI+ LD+ +
Sbjct: 460 KAIKRILDSRK 470
Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 136/259 (52%), Gaps = 25/259 (9%)
Query: 275 GTLPNAQIEFQNVQATVEQDISKLGGLSK-----EYAILKDIIISSSVKSTLSSLGLRPT 329
G N +E + + +D GG+ K E +L I+ K +G++P
Sbjct: 215 GATGNGDLEVEGTKGPTFKD---FGGIKKILDELEMNVLFPILNPEPFKK----IGVKPP 267
Query: 330 KGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFDSASQSAP 389
G+L HGPPG GKT LA A+++GV + ++ EV+S G SE+ + E+F A ++AP
Sbjct: 268 SGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAP 327
Query: 390 AVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDG----------VLVIAATN 439
++VFIDE+DAI R++ E+ +R+V LL MDG VLVI ATN
Sbjct: 328 SIVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATN 387
Query: 440 RPDSIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGME-HSLLDSEVEYLSMATHGF 498
RPD+++PALRR GR + EI + P R EIL + + D + ++ T GF
Sbjct: 388 RPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDK--KRIARLTPGF 445
Query: 499 VGADLAALCNEAALVCLRR 517
VGADL ++ A ++R
Sbjct: 446 VGADLESVAYLAGRKAIKR 464
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 7/193 (3%)
Query: 323 SLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVNLFTVNGPEVVSQNYGESEQALHEVFD 382
+ G+ G LL+GPPG GKT +A+ A+++G N + G E++++ GESE A+ +F
Sbjct: 556 AFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQ 615
Query: 383 SASQSAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVCRTDGVLVIAATNRPD 442
A AP V+F DE+DA+ +R G + +R++ L +DG R + V VI ATNRPD
Sbjct: 616 RARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGERRN-VYVIGATNRPD 674
Query: 443 SIEPALRRPGRLDREIEIAVPSPAQRLEILHALLSGMEHSLLDSEVEYLSMATH---GFV 499
++PA RPGR + + +P+ +R IL A+ +D V+ +A + GF
Sbjct: 675 VVDPAFLRPGRFGNLLYVPLPNADERASILKAI---ARKKPIDPSVDLDGIAKNNCEGFS 731
Query: 500 GADLAALCNEAAL 512
GADLA L +A
Sbjct: 732 GADLAHLVQKATF 744
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 156/242 (64%), Gaps = 2/242 (0%)
Query: 630 PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 689
PS + ++E PKV + D+GG + +L EA+E P KH E F+++G PP G+L++GPP
Sbjct: 122 PSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPP 181
Query: 690 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 749
GC KTLMA+AVA+ F+ V G EL K++GE + V LF A+ AP+IIF DEID
Sbjct: 182 GCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEID 241
Query: 750 GLAAIRGKESDGVSVS-DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 808
+ A R E+ G +R + QLL E+DG R NV VIAATNRPD +DPALLRPGRFD
Sbjct: 242 AIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFD 301
Query: 809 RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 868
RL+ V P+ R EI ++H RK+ V++R +A ++EG +GAD+ I EA + AI
Sbjct: 302 RLIEVPLPDYQGRLEILKVHTRKMNLKG-VDLRVIAEITEGASGADLKAIATEAGMFAIR 360
Query: 869 EN 870
+
Sbjct: 361 DR 362
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 128/238 (53%), Gaps = 6/238 (2%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GGL K+ L++ I + +G+ P KGVLL+GPPG GKT +A+ A+
Sbjct: 140 IGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNAT 199
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD---GGEELSQ 413
V G E+V + GE + +HE+F+ A + AP ++FIDE+DAI R D GGE
Sbjct: 200 FIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVN 259
Query: 414 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILH 473
R + LL MDG V VIAATNRPD ++PAL RPGR DR IE+ +P RLEIL
Sbjct: 260 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILK 319
Query: 474 ALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHST 531
M +D V ++ T G GADL A+ EA + +R T D L +
Sbjct: 320 VHTRKMNLKGVDLRV--IAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAV 375
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 155/242 (64%), Gaps = 2/242 (0%)
Query: 630 PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 689
P+ + ++E P V + D+GG ++ +L EA+E P KH E F+ +G PP G+L++GPP
Sbjct: 124 PTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPP 183
Query: 690 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 749
GC KTLMA+A+A E F+ V G EL K++GE + V LF A+ AP+IIF DEID
Sbjct: 184 GCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEID 243
Query: 750 GLAAIRGKESDGVSVS-DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 808
+ A R E+ G +R + QLL E+DG R NV VIAATNRPD +DPALLRPGRFD
Sbjct: 244 AIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFD 303
Query: 809 RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 868
RL+ V P+ R EI ++H R++ V++R +A ++EG +GAD+ I EA + AI
Sbjct: 304 RLIEVPLPDFEGRLEILKVHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAGMFAIR 362
Query: 869 EN 870
E
Sbjct: 363 ER 364
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 136/253 (53%), Gaps = 9/253 (3%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GGL K+ L++ I + +G+ P KGVLL+GPPG GKT +A+ AH+
Sbjct: 142 IGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNAT 201
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD---GGEELSQ 413
V G E+V + GE + +HE+F+ A + AP ++FIDE+DAI R D GGE
Sbjct: 202 FIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVN 261
Query: 414 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILH 473
R + LL MDG V VIAATNRPD ++PAL RPGR DR IE+ +P RLEIL
Sbjct: 262 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILK 321
Query: 474 ALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGT 533
M+ +D + ++ T G GADL A+ EA + +R T D L +
Sbjct: 322 VHTRRMKLKGVD--LRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDK 379
Query: 534 LFEFEGHSDTMLQ 546
+ G+ +LQ
Sbjct: 380 VL---GNERKLLQ 389
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/264 (44%), Positives = 164/264 (62%), Gaps = 4/264 (1%)
Query: 630 PSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKHQEAFKRIGTRPPTGILMFGPP 689
P+ + ++E P V + D+GG ++ +L EA+E P KH E F+ +G PP G+L++GPP
Sbjct: 121 PAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPP 180
Query: 690 GCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEID 749
GC KTLMA+A+A E F+ V G EL K++GE + V LF A+ AP+IIF DEID
Sbjct: 181 GCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEID 240
Query: 750 GLAAIRGKESDGVSVS-DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFD 808
+ A R E+ G +R + QLL E+DG R NV VIAATNRPD +DPALLRPGRFD
Sbjct: 241 AIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFD 300
Query: 809 RLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIE 868
RL+ V P+ R EI ++H R++ V++R +A L+EG +GAD+ I EA + AI
Sbjct: 301 RLIEVPLPDFEGRLEILKVHTRRMKLRG-VDLRLIAELTEGASGADLKAIATEAGMFAIR 359
Query: 869 ENLDASRITMQHLKTAIRHVQPSE 892
E + +T + AI V +E
Sbjct: 360 ER--RTYVTQEDFLKAIDKVLGNE 381
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 136/253 (53%), Gaps = 9/253 (3%)
Query: 298 LGGLSKEYAILKDII-ISSSVKSTLSSLGLRPTKGVLLHGPPGTGKTSLARLCAHDSGVN 356
+GGL K+ L++ I + +G+ P KGVLL+GPPG GKT +A+ AH+
Sbjct: 139 IGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNAT 198
Query: 357 LFTVNGPEVVSQNYGESEQALHEVFDSASQSAPAVVFIDELDAIAPARKD---GGEELSQ 413
V G E+V + GE + +HE+F+ A + AP ++FIDE+DAI R D GGE
Sbjct: 199 FIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVN 258
Query: 414 RMVATLLNLMDGVCRTDGVLVIAATNRPDSIEPALRRPGRLDREIEIAVPSPAQRLEILH 473
R + LL MDG V VIAATNRPD ++PAL RPGR DR IE+ +P RLEIL
Sbjct: 259 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILK 318
Query: 474 ALLSGMEHSLLDSEVEYLSMATHGFVGADLAALCNEAALVCLRRYSKIQTSSDVLHSTGT 533
M+ +D + ++ T G GADL A+ EA + +R T D L +
Sbjct: 319 VHTRRMKLRGVD--LRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDK 376
Query: 534 LFEFEGHSDTMLQ 546
+ G+ ++Q
Sbjct: 377 VL---GNEKKIIQ 386
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 335,330,585
Number of Sequences: 539616
Number of extensions: 13726887
Number of successful extensions: 53180
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 1271
Number of HSP's that attempted gapping in prelim test: 45623
Number of HSP's gapped (non-prelim): 6418
length of query: 957
length of database: 191,569,459
effective HSP length: 127
effective length of query: 830
effective length of database: 123,038,227
effective search space: 102121728410
effective search space used: 102121728410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)