Citrus Sinensis ID: 002172
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 956 | 2.2.26 [Sep-21-2011] | |||||||
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.998 | 0.997 | 0.895 | 0.0 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 1.0 | 1.0 | 0.897 | 0.0 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 1.0 | 1.0 | 0.897 | 0.0 | |
| Q9SU58 | 960 | ATPase 4, plasma membrane | yes | no | 1.0 | 0.995 | 0.889 | 0.0 | |
| Q9LV11 | 956 | ATPase 11, plasma membran | no | no | 1.0 | 1.0 | 0.888 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.988 | 0.993 | 0.808 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.993 | 0.997 | 0.801 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.988 | 0.993 | 0.795 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.984 | 0.992 | 0.792 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.988 | 0.995 | 0.782 | 0.0 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1743 bits (4515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 855/955 (89%), Positives = 913/955 (95%)
Query: 2 DSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESK 61
+ K E ++AVLKEAVDLEN+P+EEVFE LRC KEGL+ AA+ERL IFGYNKLEEK++SK
Sbjct: 3 EEKPEVLDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSK 62
Query: 62 ILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNA 121
+LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENNA
Sbjct: 63 LLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNA 122
Query: 122 GNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKID 181
GNAAAALMA LAPK+KVLRDG+W EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKID
Sbjct: 123 GNAAAALMARLAPKAKVLRDGRWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKID 182
Query: 182 QSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQ 241
QSALTGESLPVTKGPGD VYSGSTCKQGEIEA+VIATGVHTFFGKAAHLVDSTNQ GHFQ
Sbjct: 183 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIAVGMI+EIIVMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAVGMIIEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADA 361
AIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+FAKGVDAD
Sbjct: 303 AIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADM 362
Query: 362 VVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGK 421
VVLMAARASR ENQDAIDAAIVGMLADPKEARA I+E+HFLPFNPTDKRTALTY+D EGK
Sbjct: 363 VVLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGK 422
Query: 422 MHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPW 481
MHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSL VAYQEVP+GRKES+GGPW
Sbjct: 423 MHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPW 482
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 541
QFIGL+PLFDPPRHDSAETIRRALNLGVNVKM+TGDQLAI KETGRRLGMGTNMYPSSAL
Sbjct: 483 QFIGLLPLFDPPRHDSAETIRRALNLGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSAL 542
Query: 542 LGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
LGQ KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK
Sbjct: 543 LGQTKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 602
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
KADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 KADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
Query: 662 LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILG 721
LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG++LG
Sbjct: 663 LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLG 722
Query: 722 GYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTR 781
GYLAMMTVIFFWAAY+T+FFP FGVS+L + DD++KLASAIYLQVS ISQALIFVTR
Sbjct: 723 GYLAMMTVIFFWAAYKTNFFPHVFGVSTLEKTATDDFRKLASAIYLQVSIISQALIFVTR 782
Query: 782 ARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIP 841
+RSWSFV+RPG LLV+AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+W+YNL+FYIP
Sbjct: 783 SRSWSFVERPGFLLVIAFVIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWIYNLVFYIP 842
Query: 842 LDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMF 901
LD IKFFIRYALSG+AWDLV E+RIAFTRKKDFGKE+REL+WAHAQRTLHGL PDTK+F
Sbjct: 843 LDIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKLF 902
Query: 902 SEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
SE F ELNQ+AEEAKRRAEIARLREL+TLKGHVESVV+LKGLDI+TIQQ+YTV
Sbjct: 903 SEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1739 bits (4505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/956 (89%), Positives = 909/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC +EGL+ AA+ERL+IFGYNKLEEK+ES
Sbjct: 1 MAEKPEVLDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDA++LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWDEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE+FAKG+DAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALIEVFAKGIDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR+ENQDAID AIVGMLADPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVH +IDKFAERGLRSL VAYQEVP+GRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFI L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+T+FFPR FGVS+L + DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYKTNFFPRIFGVSTLEKTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV AF VAQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN++ YI
Sbjct: 781 RSRSWSFVERPGLLLVFAFFVAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVTYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD IKF IRYALSGKAWDLV+EQRIAFTRKKDFGKE REL+WAHAQRTLHGL PD K+
Sbjct: 841 PLDLIKFLIRYALSGKAWDLVLEQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPKI 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
FSE F ELNQ+AEEAKRRAEIARLREL+TLKGHVESVV+LKGLDI+TIQQSYTV
Sbjct: 901 FSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1739 bits (4504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 858/956 (89%), Positives = 911/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC KEGL+ AA+ERL+IFGYNKLEEK+ES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K KFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFSKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE+FA+GVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKYLIEVFARGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAIDAAIVGMLADPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQIL+L NKS+IERRVHA+IDKFAERGLRSLAVAYQEVP+GRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILHLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFI L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+T+FFPR FGVS+L + DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYKTNFFPRVFGVSTLEKTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSF++RPGLLLV+AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN++FYI
Sbjct: 781 RSRSWSFMERPGLLLVVAFFIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD F IRYALSGKAWDLVIEQRIAFTRKKDFGKE+REL+WAHAQRTLHGL PD K+
Sbjct: 841 PLDLXXFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPKI 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
FSE F ELNQ+AEEAKRRAEIARLREL+TLKGHVESVV+LKGLDI+TIQQ+YTV
Sbjct: 901 FSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1736 bits (4497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/956 (88%), Positives = 917/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
++ E +EAVLKEAVDLENVP+EEVFE LRC+KEGL+T+AA+ERL +FG+NKLEEK+ES
Sbjct: 5 VEDNREVLEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKES 64
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 65 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 124
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E+DAAILVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 125 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 184
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTK GD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 185 DQSALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHF 244
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGM++EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 245 QQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 304
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 305 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDAD 364
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR+ENQDAIDAAIVGMLADPK+ARA IQEVHFLPFNPTDKRTALTYID+EG
Sbjct: 365 TVVLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEG 424
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
HRVSKGAPEQILNL NKSEIERRVHA+IDKFAERGLRSLAVAYQ+VP+GRK+S+GGP
Sbjct: 425 NTHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGP 484
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGV+VKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 485 WQFVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSA 544
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 545 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 604
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 605 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 664
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 665 VLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 724
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFW +Y+TDFFPRTFGV++L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 725 GSYMAMMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVT 784
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPG+ L++AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN+IFYI
Sbjct: 785 RSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYI 844
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLDFIKFFIRYALSG+AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APDTKM
Sbjct: 845 PLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKM 904
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F++ +ELNQMAEEAKRRAEIARLREL+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct: 905 FTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1732 bits (4486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/956 (88%), Positives = 916/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKE VDLENVP+EEVFE+LRC++EGL+TEAA+ERL +FG+NKLEEK+ES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E+DAAILVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQS+LTGESLPVTKGPGD VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN GHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAA+ASR+ENQDAIDAAIVGMLADPKEARA ++EVHFLPFNPTDKRTALTYIDS+G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL N++EIERRVHA+IDKFAERGLRSLAVAYQEVP+G KES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFWAAY+TDFFPRTFGVS+L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWS+V+RPG+LLV+AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN++FYI
Sbjct: 781 RSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD IKF IRYALSG+AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APD KM
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKM 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F E F EL+QMAEEAKRRAEIARLREL+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct: 901 FPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1570 bits (4066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/952 (80%), Positives = 865/952 (90%), Gaps = 7/952 (0%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
+E + EAVDLEN+P+EEVFE L+C +EGLS+E R+ +FG NKLEEK+ESKILKFLG
Sbjct: 4 LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANGGGKPPDW+DFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA+LAPK+KVLRDG+W E++AAILVPGDIIS+KLGDI+PADARLLEGDPLKIDQSALTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQ VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIAVG+++EIIVM+PIQHR YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
LS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+E+F KGVD D V+L+AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
RASR ENQDAIDAA+VGMLADPKEARA I+EVHFLPFNP DKRTALTYID++G HR SK
Sbjct: 364 RASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQIL L K +++R+VHA+IDK+AERGLRSLAVA QEVP+ KES+GGPWQF+GL+
Sbjct: 424 GAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQNKD
Sbjct: 484 PLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ ALPVDELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
AVADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGF+L+
Sbjct: 604 AVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIWK+DF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIF TG++LG YLA+M
Sbjct: 664 ALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALM 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
TVIFFWA ++TDFF FGV S+ + ++ SA+YLQVS +SQALIFVTR+RSWSF
Sbjct: 724 TVIFFWAMHKTDFFTDKFGVRSIRNSE----HEMMSALYLQVSIVSQALIFVTRSRSWSF 779
Query: 788 VDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKF 847
++RPGLLLV AF +AQL+AT +AVYANW FA I+G+GWGWAGV+WLY+++FY PLD KF
Sbjct: 780 IERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKF 839
Query: 848 FIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPD---TKMFSEH 904
FIR+ LSG+AWD ++E +IAFT KKD+G+EERE +WA AQRTLHGL P+ +F++
Sbjct: 840 FIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDK 899
Query: 905 NKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
+ + EL+++AE+AKRRAEIARLRELNTLKGHVESVV+LKGLDIDTIQQ+YTV
Sbjct: 900 SSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1553 bits (4022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 765/955 (80%), Positives = 861/955 (90%), Gaps = 5/955 (0%)
Query: 3 SKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKI 62
+KA ++E + E VDLE +P+EEVFE L+C +EGLS + RL IFG NKLEEK ESKI
Sbjct: 2 AKAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKI 61
Query: 63 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAG 122
LKFLGFMWNPLSWVMEAAA+MAIALANG GKPPDWQDF+GI+ LL+INSTISFIEENNAG
Sbjct: 62 LKFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAG 121
Query: 123 NAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182
NAAAALMA LAPK+KVLRDG+W E++AAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ
Sbjct: 122 NAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 181
Query: 183 SALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQK 242
SALTGESLPVTK PGD V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN GHFQK
Sbjct: 182 SALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQK 241
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIA+GM+VEIIVMYPIQHRKYR GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 242 VLTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 301
Query: 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAV 362
IGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD+NL+E+FAKGVD + V
Sbjct: 302 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYV 361
Query: 363 VLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM 422
+L+AARASRVENQDAIDA +VGMLADPKEARA I+EVHFLPFNP DKRTALTYID+
Sbjct: 362 LLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNW 421
Query: 423 HRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQ 482
HR SKGAPEQIL+L K ++ R+VH+++DK+AERGLRSLAVA + VP+ KES GG W+
Sbjct: 422 HRASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWE 481
Query: 483 FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL 542
F+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS++LL
Sbjct: 482 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLL 541
Query: 543 GQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ+KD +I +LP++ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKK
Sbjct: 542 GQDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKK 601
Query: 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662
ADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 602 ADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVF 661
Query: 663 GFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGG 722
GFM +ALIWK+DF FMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGV+LGG
Sbjct: 662 GFMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGG 721
Query: 723 YLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRA 782
Y A+MTV+FFWA + TDFF FGV SL D +++ SA+YLQVS ISQALIFVTR+
Sbjct: 722 YQALMTVVFFWAMHDTDFFSDKFGVKSLRNSD----EEMMSALYLQVSIISQALIFVTRS 777
Query: 783 RSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPL 842
RSWSF++RPG+LLV+AF +AQL+ATLIAVYANW+FA ++G GWGWAGV+WLY++IFY+PL
Sbjct: 778 RSWSFLERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPL 837
Query: 843 DFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPD-TKMF 901
D +KF IRY LSGKAW+ +++ + AFT KKD+GKEERE +WA AQRTLHGL P+ T +F
Sbjct: 838 DIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLF 897
Query: 902 SEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
+E N + EL+++AE+AKRRAE+ARLREL+TLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct: 898 NEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1540 bits (3988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 757/952 (79%), Positives = 860/952 (90%), Gaps = 7/952 (0%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
+E + EAVDLEN+P+EEVFE L+C ++GL+++ +R+ IFG NKLEEK+ESK+LKFLG
Sbjct: 4 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANGGGKPPDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA+LAPK+KVLRDG+W E++A+ILVPGDI+S+KLGDI+PADARLLEGDPLKIDQS LTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQ+VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCI SIAVG+++EIIVM+PIQ RKYR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
LS QGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKLSVDKNL+E+FAKGVD + V+L+AA
Sbjct: 304 LSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
RASRVENQDAIDA +VGMLADPKEARA I+EVHFLPFNPTDKRTALTYID+EG HR SK
Sbjct: 364 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQI+ L K +++R+VH++I+K+AERGLRSLAVA QEVP+ K+S GGPWQFIGL+
Sbjct: 424 GAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ+KD
Sbjct: 484 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ +LPVDELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
AV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIRIVLGFML+
Sbjct: 604 AVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFMLI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL EIF TGV+LG YLA++
Sbjct: 664 ALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALV 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
TV+FFW ++TDFF FGV S+ + K SA+YLQVS +SQALIFVTR+RSWSF
Sbjct: 724 TVVFFWLIHKTDFFTNKFGVESIRNTEF----KEMSALYLQVSIVSQALIFVTRSRSWSF 779
Query: 788 VDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKF 847
V+RPG LLV AF +AQL+ATLIAVYANW FA I+G+GWGWAGV+WL++++FY PLD KF
Sbjct: 780 VERPGFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKF 839
Query: 848 FIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDT---KMFSEH 904
FIR+ LSG+AWD +++ + AFT K+++GK ERE +WA AQRTLHGL AP+ +F++
Sbjct: 840 FIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDK 899
Query: 905 NKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
+ + EL+++AE+AKRRAEIARLRELNTLKGHVESVV+LKGLDIDTI Q+YTV
Sbjct: 900 SSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1536 bits (3978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 751/948 (79%), Positives = 846/948 (89%), Gaps = 7/948 (0%)
Query: 9 EAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGF 68
+ + KE VDLE +P+EEVFE L+C+KEGLS++ +RL IFG NKLEEK E+K LKFLGF
Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67
Query: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAAL 128
MWNPLSWVME+AAIMAI LANGGGK PDWQDF+GI+ LL+INSTISFIEENNAGNAAAAL
Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAAL 127
Query: 129 MASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 188
MA+LAPK+KVLRDGKW E++A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248
SLP TK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLT+IG
Sbjct: 188 SLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EI++MYPIQHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAAR 368
S QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIE+F K +D+D+VVLMAAR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAAR 367
Query: 369 ASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKG 428
ASR+ENQDAIDA+IVGML DPKEARA I EVHFLPFNP DKRTA+TYID G HR SKG
Sbjct: 368 ASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKG 427
Query: 429 APEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMP 488
APEQI+ L + E +R+ H +ID FAERGLRSL VA Q VP+ KES G PW+F+GL+P
Sbjct: 428 APEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE 548
LFDPPRHDSAETIRRAL LGVNVKMITGDQLAI ETGRRLGMGTNMYPS++LLG +KDE
Sbjct: 488 LFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDE 547
Query: 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
S+V +P+DELIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKKADIGIA
Sbjct: 548 SLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 607
Query: 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668
VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 608 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 667
Query: 669 LIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMT 728
LIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGV+LG Y+A+ T
Sbjct: 668 LIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMALTT 727
Query: 729 VIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFV 788
V+FFW A+ TDFF +TFGV S+ + ++L +A+YLQVS ISQALIFVTR+RSWSFV
Sbjct: 728 VLFFWLAHDTDFFSKTFGVRSIQGNE----EELMAALYLQVSIISQALIFVTRSRSWSFV 783
Query: 789 DRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848
+RPG LL++AF +AQL+ATLIAVYANW FA I G GWGWAG +W+Y++I YIPLD +KF
Sbjct: 784 ERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFI 843
Query: 849 IRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFT 908
IRYAL+GKAWD +I Q+ AFT KKD+GK ERE +WA AQRTLHGL P+ MF+++
Sbjct: 844 IRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA-MFNDNK--N 900
Query: 909 ELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
EL+++AE+AKRRAE+ARLREL+TLKGHVESVV+LKGLDIDTIQQ YTV
Sbjct: 901 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1527 bits (3954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/950 (78%), Positives = 838/950 (88%), Gaps = 5/950 (0%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
++ + E+VDL +PMEEVFE L+C K+GL+ A RL +FG NKLEEK+ESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AA+MAIALANGGG+PPDWQDFVGIV LLLINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 LMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK+KVLRD +W E++A+ILVPGD+IS+KLGDIIPADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ES+PVTK P D V+SGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+IVE++VMYPIQ R+YR GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
L QGAITKRMTAIEEMAGMDVLC DKTGTLTLNKL+VDKNL+E+FAKGV + V L+AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
RASR+ENQDAIDAAIVGMLADPKEARA ++EVHF PFNP DKRTALTY+DS+G HR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQILNL K ++ R+VH +IDKFAERGLRSLAVA QEV + +K++ GGPWQ +GL+
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
AV DATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM +
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIW+FDF PFMVLIIAILNDGTIMTISKDR+KPSP PDSWKL +IF+TGV+LGGY A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
TV+FFW +DFF FGV L ++ +++ +A+YLQVS ISQALIFVTR+RSWS+
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRP----EQMMAALYLQVSIISQALIFVTRSRSWSY 779
Query: 788 VDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKF 847
+ PGLLL+ AF +AQL+AT IAVYANWSFA IEG GWGWAGV+WLY+ + YIPLD +KF
Sbjct: 780 AECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKF 839
Query: 848 FIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLH-APDTKMFSEHNK 906
IRY LSGKAW ++E + AFT KKD+GKEERE +WA AQRTLHGL A +F+E N
Sbjct: 840 GIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNS 899
Query: 907 FTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
++EL+Q+AE+AKRRAE+ RLRE+NTLKGHVESVV+LKGLDIDTIQQ YTV
Sbjct: 900 YSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 956 | ||||||
| 449461911 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 1.0 | 1.0 | 0.918 | 0.0 | |
| 356572262 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 1.0 | 1.0 | 0.911 | 0.0 | |
| 225456641 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 1.0 | 1.0 | 0.910 | 0.0 | |
| 224121558 | 966 | autoinhibited H+ ATPase [Populus trichoc | 1.0 | 0.989 | 0.897 | 0.0 | |
| 350535937 | 956 | plasma membrane H+-ATPase [Solanum lycop | 1.0 | 1.0 | 0.900 | 0.0 | |
| 379059756 | 956 | plasma membrane H+-ATPase [Melastoma mal | 1.0 | 1.0 | 0.901 | 0.0 | |
| 297793855 | 956 | AHA11-ATPASE 11 [Arabidopsis lyrata subs | 1.0 | 1.0 | 0.885 | 0.0 | |
| 6759599 | 956 | plasma membrane H+ ATPase [Prunus persic | 1.0 | 1.0 | 0.901 | 0.0 | |
| 435003 | 956 | H(+)-transporting ATPase [Solanum tubero | 1.0 | 1.0 | 0.898 | 0.0 | |
| 33943131 | 956 | plasma membrane H+-ATPase [Juglans regia | 1.0 | 1.0 | 0.904 | 0.0 |
| >gi|449461911|ref|XP_004148685.1| PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis sativus] gi|449505851|ref|XP_004162585.1| PREDICTED: ATPase 11, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1765 bits (4571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 878/956 (91%), Positives = 917/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAV+KEAVDLENVP+EEVF+TLRCNK GL+TEAA ERL IFG+NKLEEK+ES
Sbjct: 1 MGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNKNGLTTEAAHERLAIFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K+LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLLLINSTISFIEENN
Sbjct: 61 KLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW+EE+A++LVPGDIISVKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMAHLAPKAKVLRDGKWVEEEASVLVPGDIISVKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSI VGM+VEIIVMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIVVGMVVEIIVMYPIQHRPYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK LIE+FAKGVD D
Sbjct: 301 MAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFAKGVDVD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASRVENQDAIDAAIVGML+DPKEARA IQEVHFLPFNPTDKRTALTY D++
Sbjct: 361 TVVLMAARASRVENQDAIDAAIVGMLSDPKEARAGIQEVHFLPFNPTDKRTALTYTDTDS 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKSEIERRVHA+IDKFAERGLRSLAVAYQEV DGRKES GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVSDGRKESHGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI LPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESISGLPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALI++FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIF TG+IL
Sbjct: 661 VLGFMLLALIYQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFGTGIIL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFPRTFGVSSL +KD DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYKTDFFPRTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV AF +AQLIATLIAVYANWSFAAIEG+GWGWAGVVWLYNLIFY
Sbjct: 781 RSRSWSFVERPGLLLVAAFIIAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD IKF IRYA+SG+AWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGL P+ KM
Sbjct: 841 PLDIIKFAIRYAISGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPEAKM 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
FS+ +TELNQMAEEAKRRAEIARLREL+TLKGHVESVVRLKGLDI+TIQQSYTV
Sbjct: 901 FSDRTTYTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDINTIQQSYTV 956
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572262|ref|XP_003554288.1| PREDICTED: ATPase 11, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1764 bits (4569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/956 (91%), Positives = 917/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E M VLKEAVDLENVP+EEVF+TLRC+ GL+TE+AEERL IFG+NKLEEK+ES
Sbjct: 1 MAEKEEAMRVVLKEAVDLENVPLEEVFQTLRCDSNGLTTESAEERLAIFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K+LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+K LRDGKW+EEDA+ILVPGDIISVKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKFLRDGKWVEEDASILVPGDIISVKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKG GDSVYSGSTCKQGEI AVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGHGDSVYSGSTCKQGEINAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHR+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEIFAKGVD D
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEIFAKGVDVD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARA+R+ENQDAIDA+IVGML DPKEARA IQEVHFLPFNPTDKRTA+TYIDSE
Sbjct: 361 TVVLMAARAARLENQDAIDASIVGMLGDPKEARAGIQEVHFLPFNPTDKRTAITYIDSES 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL RNKSEIERRVH++IDKFA+RGLRSLAVAYQEVPDG+KES GGP
Sbjct: 421 KMHRVSKGAPEQILNLARNKSEIERRVHSVIDKFADRGLRSLAVAYQEVPDGKKESQGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGL+PLFDPPRHDSA+TIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAQTIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI LPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIATLPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLAEIFTTG+IL
Sbjct: 661 VLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPYPDSWKLAEIFTTGIIL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFP+TFGVSSL +KD DD++KLASAIYLQVST+SQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYKTDFFPQTFGVSSLQKKDRDDFRKLASAIYLQVSTVSQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
RARSWSFV+RPGLLLV AF +AQLIATLIAVYANWSFAAIEG+GWGWAGVVWLYNL+FYI
Sbjct: 781 RARSWSFVERPGLLLVAAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLDFIKF IRYALSG+AWDLVIEQRIAFTRKKDFGKEERELKWAHA RTLHGLH P+TKM
Sbjct: 841 PLDFIKFIIRYALSGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAHRTLHGLHPPETKM 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F+E +TELNQMAEEA+RRA IARLREL+TL GHVESV RLKGLDIDTIQQ+YT+
Sbjct: 901 FNERTSYTELNQMAEEARRRANIARLRELHTLTGHVESVFRLKGLDIDTIQQAYTI 956
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456641|ref|XP_002270344.1| PREDICTED: ATPase 11, plasma membrane-type [Vitis vinifera] gi|297734039|emb|CBI15286.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1760 bits (4559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 870/956 (91%), Positives = 917/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKE VDLEN+P+EEVFE LRC++EGL++EAA+ERL IFGYN+LEEK+ES
Sbjct: 1 MADKPEVLEAVLKETVDLENIPIEEVFENLRCSREGLTSEAAQERLAIFGYNRLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLLLINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD +YSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+FAKGVD D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR+ENQDAID AIVGMLADPKEARA IQEVHFLPFNPTDKRTALTYIDSEG
Sbjct: 361 TVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL RNKSEIERRVHA+IDKFAERGLRSLAVAYQEVPDGRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLARNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG++L
Sbjct: 661 VLGFMLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G YLAMMTVIFFWAAY+TDFFPR F VS+L + DD++KLASAIYLQVST+SQALIFVT
Sbjct: 721 GSYLAMMTVIFFWAAYKTDFFPRVFHVSTLEKTAHDDFRKLASAIYLQVSTVSQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWS+V+RPGLLLV AF VAQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN+IFYI
Sbjct: 781 RSRSWSYVERPGLLLVGAFLVAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLDFIKF IRYALSG+AWDLVIEQRIAFTR+KDFGKE RELKWAHAQRTLHGL PDTKM
Sbjct: 841 PLDFIKFIIRYALSGRAWDLVIEQRIAFTRQKDFGKEARELKWAHAQRTLHGLQPPDTKM 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F++ FTELNQMAEEAKRRAEIARLREL+TLKGHVESVVRLKGLDI+TI Q+YTV
Sbjct: 901 FTDRTNFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDINTIPQAYTV 956
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121558|ref|XP_002318614.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222859287|gb|EEE96834.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1751 bits (4535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 867/966 (89%), Positives = 919/966 (95%), Gaps = 10/966 (1%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKE VDLEN+P+EEV E LRC++EGL+T+AAEERL IFG+NKLEEK+E
Sbjct: 1 MGDKGEVLEAVLKETVDLENIPIEEVLENLRCSREGLTTQAAEERLAIFGHNKLEEKKER 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E+DAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QK----------VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIP 290
QK VLTAIGNFCICSIA+GM++E+IVMYPIQ RKYRPGIDNLLVLLIGGIP
Sbjct: 241 QKARRYNCYMIFVLTAIGNFCICSIAIGMVIELIVMYPIQDRKYRPGIDNLLVLLIGGIP 300
Query: 291 IAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI 350
IAMPTVLSVTMAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLI
Sbjct: 301 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 360
Query: 351 EIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKR 410
E+FAKGVDADAVVLMAARASR+ENQDAID AIVGMLADPKEARA IQEVHFLPFNPTDKR
Sbjct: 361 EVFAKGVDADAVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKR 420
Query: 411 TALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVP 470
TALTYIDS GKMHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSLAVAYQEVP
Sbjct: 421 TALTYIDSGGKMHRVSKGAPEQILNLSHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP 480
Query: 471 DGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530
+GRKES+GGPWQFIGL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLG
Sbjct: 481 EGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 540
Query: 531 MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT 590
MGTNMYPSSALLGQNKDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT
Sbjct: 541 MGTNMYPSSALLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT 600
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650
GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 601 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 660
Query: 651 IYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL 710
IYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL
Sbjct: 661 IYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL 720
Query: 711 AEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVS 770
AEIFTTG++LG YLAMMTVIFFW AY+TDFFPR FGVS+L + DD++KLASAIYLQVS
Sbjct: 721 AEIFTTGIVLGSYLAMMTVIFFWVAYKTDFFPRVFGVSTLEKTAHDDFRKLASAIYLQVS 780
Query: 771 TISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGV 830
TISQALIFVTR+RSWSFV+RPGLLLV+AF +AQLIATLIAVYANWSFAAI+G+GWGWAGV
Sbjct: 781 TISQALIFVTRSRSWSFVERPGLLLVVAFIIAQLIATLIAVYANWSFAAIKGIGWGWAGV 840
Query: 831 VWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTL 890
+WLYN+IFY PLDFIKFFIRYALSG+AWDLVIEQRIAFTR+KDFGKE+REL+WAHAQRTL
Sbjct: 841 IWLYNIIFYFPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTL 900
Query: 891 HGLHAPDTKMFSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTI 950
HGL PDTKMF+E FTELNQMAEEAKRRAEIARLREL+TLKGHVESVVRLKGLDIDTI
Sbjct: 901 HGLPLPDTKMFTERTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTI 960
Query: 951 QQSYTV 956
QQ+YTV
Sbjct: 961 QQAYTV 966
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350535937|ref|NP_001234477.1| plasma membrane H+-ATPase [Solanum lycopersicum] gi|5901757|gb|AAD55399.1|AF179442_1 plasma membrane H+-ATPase isoform LHA2 [Solanum lycopersicum] gi|9789539|gb|AAF98344.1|AF275745_1 plasma membrane H+-ATPase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 1750 bits (4532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 861/956 (90%), Positives = 911/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC KEGL+ AA+ERL IFGYNKLEEK+ES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTGTAAQERLAIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWNEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+E+FAKGVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAID AIVGML+DPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRTENQDAIDTAIVGMLSDPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSL VAYQEVP+GRKESSGGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESSGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI +LP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIASLPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFPR FGVS+L DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYETDFFPRVFGVSTLQRTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV+AF +AQL+ATLIAVYA+WSFAAIEG+GWGWAGV+WLYNL+FY
Sbjct: 781 RSRSWSFVERPGLLLVVAFLIAQLVATLIAVYASWSFAAIEGIGWGWAGVIWLYNLVFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD IKF IRYALSG+AWDLV+EQRIAFTRKKDFGKE+REL+WAHAQRTLHGL PDTK+
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKL 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
FSE F ELNQ+AEEAKRRAEIAR REL+TLKGHVESVV+LKGLDI+TIQQSYTV
Sbjct: 901 FSEATNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|379059756|gb|AFC88896.1| plasma membrane H+-ATPase [Melastoma malabathricum] | Back alignment and taxonomy information |
|---|
Score = 1750 bits (4532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 862/956 (90%), Positives = 913/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKEAVDLEN+P+EEVFE LRC+KEGL+T++AEERL IFG NKLEEK+ES
Sbjct: 1 MGEKPEVLEAVLKEAVDLENIPIEEVFENLRCSKEGLTTQSAEERLAIFGQNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W EEDAA+LVPGDIIS+KLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ RKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQRRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+FAKGVD D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAID+AIVGMLADPKEAR+ IQEVHFLPFNPTDKRTALTYIDSEG
Sbjct: 361 TVVLMAARASRTENQDAIDSAIVGMLADPKEARSGIQEVHFLPFNPTDKRTALTYIDSEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
+MHRVSKGAPEQILN NKSEIERRVHA+IDKFAERGLRSLAVAYQEVP+GRKES GGP
Sbjct: 421 RMHRVSKGAPEQILNPAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESPGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ AI KETGRRLGMG NMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQFAIGKETGRRLGMGINMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLI+AILNDGT+MTISKDRVKPSPLPDSWKLAEIFTTG++L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIVAILNDGTVMTISKDRVKPSPLPDSWKLAEIFTTGIVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G YLAMMTVIFFWAAY+T+FFPR FGV++L + DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GSYLAMMTVIFFWAAYETNFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+R WS+V+RPGLLL+ AF +AQLIATLIAVYA+W FAAIEG+GWGWAGV+WLYN+IFYI
Sbjct: 781 RSRGWSYVERPGLLLIAAFVIAQLIATLIAVYASWGFAAIEGIGWGWAGVIWLYNIIFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLDFIKFFIRYALSGKAWDLVIEQRIAFTR+KDFGKE+REL+WAHAQRTLHGL PDTK+
Sbjct: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKI 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F+E +F ELN +AEEAKRRAEIARLRELNTLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct: 901 FTERTRFAELNHIAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIETIQQAYTV 956
|
Source: Melastoma malabathricum Species: Melastoma malabathricum Genus: Melastoma Family: Melastomataceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297793855|ref|XP_002864812.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] gi|297310647|gb|EFH41071.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1749 bits (4531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/956 (88%), Positives = 915/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EA+LKE VDLENVP+EEVFE+LRC++EGL+TEAA+ERL +FG+NKLEEK+ES
Sbjct: 1 MGDKEEVLEAILKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAI LANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E+DAAILVPGDI+S+KLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIVSIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQS+LTGESLPVTKGPGD VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAA+ASR+ENQDAIDAAIVGMLADPKEARA ++EVHFLPFNPTDKRTALTYIDS+G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NK+EIERRVHA+IDKFAERGLRSLAVAYQEVP+G KES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFWAAY+TDFFPRTFGVS+L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWS+V+RPG+ LV+AF +AQL+ATLIAVYANWSFAAIEG+GWGWAGV+WLYN++FYI
Sbjct: 781 RSRSWSYVERPGMWLVIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD IKF IRYALSG+AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APD KM
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKM 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F E F EL+QMAEEAKRRAEIARLREL+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct: 901 FPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6759599|emb|CAB69824.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1749 bits (4530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 862/956 (90%), Positives = 916/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC+KEGLS+EAAEERLTIFG+NKLEEKQES
Sbjct: 1 MAEKPEVLDAVLKETVDLENIPIEEVFENLRCSKEGLSSEAAEERLTIFGHNKLEEKQES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDG+W E++A +LVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQEAGVLVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTK PGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKSPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+FAKG+D D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGMDPD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASRVENQDAID AIVGMLADPKEARA +QE+HFLPFNPTDKRTALTY+D +G
Sbjct: 361 TVVLMAARASRVENQDAIDTAIVGMLADPKEARAGVQELHFLPFNPTDKRTALTYLDRDG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSLAVAYQEVP+GRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFVGLMPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESIVALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESIVALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G YLA+MTVIFFWAAY+TDFFPR FGVS+L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 721 GSYLAIMTVIFFWAAYKTDFFPRVFGVSTLEKTANDDFRKLASAIYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV+AF +AQLIATLIAVYANWSFAAIEG+GWGWAGV+WLYNL+FY
Sbjct: 781 RSRSWSFVERPGLLLVVAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNLVFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD IKF IRYALSGKAWDL+IEQRIAFTR+KDFGKE+REL+WAHAQRTLHGL PDTKM
Sbjct: 841 PLDIIKFMIRYALSGKAWDLLIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKM 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F+E FTELNQMAEEAKRRAEIARLREL+TLKGHVESVVRLKGLDIDTIQQ+YTV
Sbjct: 901 FTERTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 956
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|435003|emb|CAA54046.1| H(+)-transporting ATPase [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 1749 bits (4529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 859/956 (89%), Positives = 910/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC KEGL+ AA+ERL IFGYNKLEEK+ES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTGTAAQERLAIFGYNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+TLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW EEDAA+LVPGDIIS+KLGDI+PAD RLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWNEEDAAVLVPGDIISIKLGDIVPADRRLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+E+FAKGVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR ENQDAID AIVGML+DPKEARA I+E+HFLPFNPTDKRTALTY+D EG
Sbjct: 361 TVVLMAARASRTENQDAIDTAIVGMLSDPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSL VAYQEVP+GRKESSGGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESSGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI +LP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIASLPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGV+L
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
GGYLAMMTVIFFWAAY+TDFFPR FGVS+L DD++KLASAIYLQVSTISQALIFVT
Sbjct: 721 GGYLAMMTVIFFWAAYETDFFPRVFGVSTLQRTATDDFRKLASAIYLQVSTISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSFV+RPGLLLV+AF +AQL+ATLIAVYA+WSFAAIEG+GWGWAGV+WLYNL+FY
Sbjct: 781 RSRSWSFVERPGLLLVVAFLIAQLVATLIAVYASWSFAAIEGIGWGWAGVIWLYNLVFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD IKF IRYALSG+AWDLV+EQRIAFTRKKDFGKE+REL+WAHAQRTLHGL PDTK+
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKL 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
FSE F ELNQ+AEEAKRRAEIAR REL+TLKGHVESVV+LKGLDI+TIQQSYTV
Sbjct: 901 FSESTNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|33943131|gb|AAQ55291.1| plasma membrane H+-ATPase [Juglans regia] | Back alignment and taxonomy information |
|---|
Score = 1748 bits (4528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 865/956 (90%), Positives = 913/956 (95%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E ++AVLKE VDLEN+P+EEVFE LRC+KEGL+T AAEERL IFG+NKLEEK++S
Sbjct: 1 MAEKPEVLDAVLKEVVDLENIPIEEVFENLRCSKEGLTTVAAEERLAIFGHNKLEEKKDS 60
Query: 61 KILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120
K LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI+ LL INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIVLLFINSTISFIEENN 120
Query: 121 AGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
AGNAAAALMA LAPK+KVLRDGKW E DAA+LVPGDI+S+KLGDIIPADARLL+GDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWSEYDAAVLVPGDIVSIKLGDIIPADARLLDGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTKGPGD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ RKYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK LIE+F KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKALIEVFTKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
AVVLMAARASRVENQDAID+AIVGMLADPKEARA IQEVHFLPFNPTDKRTALTYID +G
Sbjct: 361 AVVLMAARASRVENQDAIDSAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDRDG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL NKS+IERRVHA+IDKFAERGLRSLAVAYQEVP+GRKES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIFTTG+IL
Sbjct: 661 VLGFMLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFTTGIIL 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G YLAMMTVIFFWAAY+TDFFPR FGV +L + DD +KLASAIYLQVS ISQALIFVT
Sbjct: 721 GSYLAMMTVIFFWAAYKTDFFPRIFGVPTLEKTAHDDIRKLASAIYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYI 840
R+RSWSF++RPG LLV+AF +AQLIATLIAVYA+WSFAAIEG+GWGWAGV+WLYN+IFY
Sbjct: 781 RSRSWSFIERPGFLLVVAFIIAQLIATLIAVYASWSFAAIEGIGWGWAGVIWLYNIIFYF 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLDFIKFFIRYALSG+AWDLVIEQRIAFTR+KDFGKE+REL+WAHAQRTLHGL PD+KM
Sbjct: 841 PLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDSKM 900
Query: 901 FSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F+E FTELNQ+AEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV
Sbjct: 901 FTERTHFTELNQIAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
|
Source: Juglans regia Species: Juglans regia Genus: Juglans Family: Juglandaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 956 | ||||||
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 1.0 | 0.995 | 0.810 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 1.0 | 1.0 | 0.807 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.990 | 0.997 | 0.712 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.984 | 0.992 | 0.719 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.988 | 0.995 | 0.711 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.993 | 0.995 | 0.703 | 0.0 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.988 | 0.995 | 0.708 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.985 | 0.992 | 0.706 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.990 | 0.985 | 0.684 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.973 | 0.983 | 0.646 | 0.0 |
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4001 (1413.5 bits), Expect = 0., P = 0.
Identities = 775/956 (81%), Positives = 835/956 (87%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
++ E +EAVLKEAVDLENVP+EEVFE LRC+KEGL+T+AA+ERL +FG+NKLEEK+ES
Sbjct: 5 VEDNREVLEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKES 64
Query: 61 KILKFLGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXX 120
K LKFLGFMWNPLSWVME NGGGKPPDWQDFVGI+TLL+INSTISFIEE
Sbjct: 65 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 124
Query: 121 XXXXXXXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
PK+KVLRDG+W E+DAAILVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 125 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 184
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQSALTGESLPVTK GD VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHF
Sbjct: 185 DQSALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHF 244
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGM++EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 245 QQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 304
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 305 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDAD 364
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAARASR+ENQDAIDAAIVGMLADPK+ARA IQEVHFLPFNPTDKRTALTYID+EG
Sbjct: 365 TVVLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEG 424
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
HRVSKGAPEQILNL NKSEIERRVHA+IDKFAERGLRSLAVAYQ+VP+GRK+S+GGP
Sbjct: 425 NTHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGP 484
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGV+VKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 485 WQFVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSA 544
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 545 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 604
Query: 601 KKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KK VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 605 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 664
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIW+FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 665 VLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 724
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFW +Y+TDFFPRTFGV++L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 725 GSYMAMMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVT 784
Query: 781 RARSWSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYI 840
R+RSWSFV+RPG TLIAVYANWSFAAIE LYN+IFYI
Sbjct: 785 RSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYI 844
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLDFIKFFIRYALSG+AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APDTKM
Sbjct: 845 PLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKM 904
Query: 901 FSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F++ +ELNQM L+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct: 905 FTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3993 (1410.7 bits), Expect = 0., P = 0.
Identities = 772/956 (80%), Positives = 833/956 (87%)
Query: 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQES 60
M K E +EAVLKE VDLENVP+EEVFE+LRC++EGL+TEAA+ERL +FG+NKLEEK+ES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KILKFLGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXX 120
K LKFLGFMWNPLSWVME NGGGKPPDWQDFVGI+TLL+INSTISFIEE
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 XXXXXXXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
PK+KVLRDG+W E+DAAILVPGDIIS+KLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240
DQS+LTGESLPVTKGPGD VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN GHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQHR YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDAD 360
MAIGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 AVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEG 420
VVLMAA+ASR+ENQDAIDAAIVGMLADPKEARA ++EVHFLPFNPTDKRTALTYIDS+G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480
KMHRVSKGAPEQILNL N++EIERRVHA+IDKFAERGLRSLAVAYQEVP+G KES+GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
KK VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI 660
Query: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720
VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKL+EIF TGV+
Sbjct: 661 VLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVF 720
Query: 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVT 780
G Y+AMMTVIFFWAAY+TDFFPRTFGVS+L + DD++KLASAIYLQVS ISQALIFVT
Sbjct: 721 GSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVT 780
Query: 781 RARSWSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYI 840
R+RSWS+V+RPG TLIAVYANWSFAAIE LYN++FYI
Sbjct: 781 RSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYI 840
Query: 841 PLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKM 900
PLD IKF IRYALSG+AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APD KM
Sbjct: 841 PLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKM 900
Query: 901 FSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F E F EL+QM L+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct: 901 FPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3501 (1237.5 bits), Expect = 0., P = 0.
Identities = 679/953 (71%), Positives = 772/953 (81%)
Query: 5 AETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILK 64
A +E ++ E VDLE +P+EEVF+ L+C++EGLS E RL IFG NKLEEK+ESK+LK
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 65 FLGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXX 124
FLGFMWNPLSWVME NGGGKPPDWQDFVGIV LL+INSTISF+EE
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 125 XXXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSA 184
PK+KVLRDGKW E++A+ILVPGDI+S+KLGDIIPADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 185 LTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVL 244
LTGESLP TKGPG+ V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 245 TAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304
TAIGNFCICSIAVG+ +EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 305 SHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVL 364
SH+LS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE++ KGV+ D V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 365 MAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHR 424
AARASRVENQDAIDAA+VGMLADPKEARA I+E+HFLPFNP DKRTALT+IDS G HR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 425 VSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFI 484
VSKGAPEQIL+L ++++ +RVH+ IDK+AERGLRSLAV+ Q VP+ KESSG PW+F+
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ 544
G++PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMG+NMYPSS+LLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 545 NKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXX 604
+KDE++ +PV++LIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 605 XXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 664
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 665 MLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYL 724
ML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TGV+LGGY+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 725 AMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARS 784
A+MTV+FFWAAY+TDFFPRTF V L + ++ SA+YLQVS +SQALIFVTR+RS
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSE----HEMMSALYLQVSIVSQALIFVTRSRS 777
Query: 785 WSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDF 844
WSF +RPG T IAVY NW FA I+ LY+++FY PLD
Sbjct: 778 WSFTERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDI 837
Query: 845 IKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDT-KMFSE 903
+KF IRY L+G AW +I+ R AFT K+++G EERE +WAHAQRTLHGL +T + E
Sbjct: 838 MKFAIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPE 897
Query: 904 HNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
+ EL+++ L+TLKGHVESVV+LKGLDI+T YTV
Sbjct: 898 RGGYRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAGH-YTV 949
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3497 (1236.1 bits), Expect = 0., P = 0.
Identities = 682/948 (71%), Positives = 767/948 (80%)
Query: 9 EAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGF 68
+ + KE VDLE +P+EEVFE L+C+KEGLS++ +RL IFG NKLEEK E+K LKFLGF
Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67
Query: 69 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXXX 128
MWNPLSWVME NGGGK PDWQDF+GI+ LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAAL 127
Query: 129 XXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 188
PK+KVLRDGKW E++A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248
SLP TK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLT+IG
Sbjct: 188 SLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EI++MYPIQHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAAR 368
S QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK+LIE+F K +D+D+VVLMAAR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAAR 367
Query: 369 ASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKG 428
ASR+ENQDAIDA+IVGML DPKEARA I EVHFLPFNP DKRTA+TYID G HR SKG
Sbjct: 368 ASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKG 427
Query: 429 APEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMP 488
APEQI+ L + E +R+ H +ID FAERGLRSL VA Q VP+ KES G PW+F+GL+P
Sbjct: 428 APEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE 548
LFDPPRHDSAETIRRAL LGVNVKMITGDQLAI ETGRRLGMGTNMYPS++LLG +KDE
Sbjct: 488 LFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDE 547
Query: 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXX 608
S+V +P+DELIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 548 SLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 607
Query: 609 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 608 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 667
Query: 669 LIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMT 728
LIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGV+LG Y+A+ T
Sbjct: 668 LIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMALTT 727
Query: 729 VIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFV 788
V+FFW A+ TDFF +TFGV S+ + ++L +A+YLQVS ISQALIFVTR+RSWSFV
Sbjct: 728 VLFFWLAHDTDFFSKTFGVRSIQGNE----EELMAALYLQVSIISQALIFVTRSRSWSFV 783
Query: 789 DRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFF 848
+RPG TLIAVYANW FA I +Y++I YIPLD +KF
Sbjct: 784 ERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFI 843
Query: 849 IRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFT 908
IRYAL+GKAWD +I Q+ AFT KKD+GK ERE +WA AQRTLHGL P+ MF++ NK
Sbjct: 844 IRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA-MFND-NK-N 900
Query: 909 ELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
EL+++ L+TLKGHVESVV+LKGLDIDTIQQ YTV
Sbjct: 901 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3470 (1226.6 bits), Expect = 0., P = 0.
Identities = 676/950 (71%), Positives = 764/950 (80%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
+E + E VDLE +P+EEVF+ L+C +EGL+T+ E+R+ IFG NKLEEK+ESKILKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXX 127
FMWNPLSWVME NG +PPDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
PK+KVLRDGKW E++AAILVPGDI+S+KLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+ +EI+VMYPIQHRKYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
LS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+E+F KGV+ D V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
ASRVENQDAIDAA+VGMLADPKEARA I+EVHFLPFNP DKRTALTYIDS+G HRVSK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQIL+L + ++ ++V + IDK+AERGLRSLAVA Q VP+ KES GGPW+F+GL+
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+ALLG +KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
+I ++PV+ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFML+
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIW+FDF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TG++LGGY A+M
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
+VIFFWAA++TDFF FGV S+ +D +D +L A+YLQVS ISQALIFVTR+RSWSF
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSI--RDNND--ELMGAVYLQVSIISQALIFVTRSRSWSF 779
Query: 788 VDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKF 847
V+RPG TLIAVYA+W+FA ++ +Y+++ Y P D +KF
Sbjct: 780 VERPGALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKF 839
Query: 848 FIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAP-DTKMFSEHNK 906
IRY LSGKAW + + R AFT KKD+G ERE +WA AQRTLHGL D +F E
Sbjct: 840 AIRYILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGS 899
Query: 907 FTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
+ EL+++ L+TLKGHVESV +LKGLDIDT YTV
Sbjct: 900 YRELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3467 (1225.5 bits), Expect = 0., P = 0.
Identities = 672/955 (70%), Positives = 760/955 (79%)
Query: 3 SKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKI 62
+K + + + E +DLE +P+EEV LRC +EGL+++ + RL IFG NKLEEK+E+K+
Sbjct: 4 NKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKV 63
Query: 63 LKFLGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXX 122
LKFLGFMWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 64 LKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAG 123
Query: 123 XXXXXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182
PK+KVLRDGKW E++AAILVPGDIIS+KLGDI+PAD RLL+GDPLKIDQ
Sbjct: 124 NAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQ 183
Query: 183 SALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQK 242
SALTGESLPVTK PG VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ+GHFQK
Sbjct: 184 SALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQK 243
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIA+GM++EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 244 VLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303
Query: 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAV 362
IGSHRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+++E+F K +D D +
Sbjct: 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQL 363
Query: 363 VLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM 422
++ AARASRVENQDAIDA IVGML DP+EAR I EVHF PFNP DKRTA+TYID+ G
Sbjct: 364 LVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNW 423
Query: 423 HRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQ 482
HRVSKGAPEQI+ L + + +R H IIDKFA+RGLRSLAV Q V + K S G PWQ
Sbjct: 424 HRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQ 483
Query: 483 FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL 542
F+GL+PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALL
Sbjct: 484 FLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 543
Query: 543 GQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ+KDESI +LPVDELIEKADGFAGVFPEHKYEIVKRLQ KHICGMTGDGVNDAPALK+
Sbjct: 544 GQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKR 603
Query: 603 XXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 604 ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVM 663
Query: 663 GFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGG 722
GFMLLALIWKFDF PFMVLI+AILNDGTIMTISKDRVKPSPLPDSWKL EIF TGV+LG
Sbjct: 664 GFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGT 723
Query: 723 YLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRA 782
YLA+MTV+FFWAA TDFF FGV S+ +L +A+YLQVS +SQALIFVTR+
Sbjct: 724 YLAVMTVVFFWAAESTDFFSAKFGVRSISGNP----HELTAAVYLQVSIVSQALIFVTRS 779
Query: 783 RSWSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPL 842
RSWS+V+RPG TLIAVYANW+FA I LY+++FYIPL
Sbjct: 780 RSWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPL 839
Query: 843 DFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTK-MF 901
D +KF IRY+LSG+AWD VIE + AFT KKD+GK ERE +WA AQRTLHGL T MF
Sbjct: 840 DILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMF 899
Query: 902 SEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
++ + + EL+++ +TLKGHVESVV+ KGLDI+ IQQ YT+
Sbjct: 900 NDKSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3464 (1224.4 bits), Expect = 0., P = 0.
Identities = 673/950 (70%), Positives = 761/950 (80%)
Query: 8 MEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLG 67
++ + E+VDL +PMEEVFE L+C K+GL+ A RL +FG NKLEEK+ESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXX 127
FMWNPLSWVME NGGG+PPDWQDFVGIV LLLINSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
PK+KVLRD +W E++A+ILVPGD+IS+KLGDIIPADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAI 247
ES+PVTK P D V+SGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+IVE++VMYPIQ R+YR GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
L QGAITKRMTAIEEMAGMDVLC DKTGTLTLNKL+VDKNL+E+FAKGV + V L+AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 RASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSK 427
RASR+ENQDAIDAAIVGMLADPKEARA ++EVHF PFNP DKRTALTY+DS+G HR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLM 487
GAPEQILNL K ++ R+VH +IDKFAERGLRSLAVA QEV + +K++ GGPWQ +GL+
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM +
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMM 727
ALIW+FDF PFMVLIIAILNDGTIMTISKDR+KPSP PDSWKL +IF+TGV+LGGY A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 728 TVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSF 787
TV+FFW +DFF FGV L ++ +++ +A+YLQVS ISQALIFVTR+RSWS+
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRP----EQMMAALYLQVSIISQALIFVTRSRSWSY 779
Query: 788 VDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKF 847
+ PG T IAVYANWSFA IE LY+ + YIPLD +KF
Sbjct: 780 AECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKF 839
Query: 848 FIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLH-APDTKMFSEHNK 906
IRY LSGKAW ++E + AFT KKD+GKEERE +WA AQRTLHGL A +F+E N
Sbjct: 840 GIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNS 899
Query: 907 FTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
++EL+Q+ +NTLKGHVESVV+LKGLDIDTIQQ YTV
Sbjct: 900 YSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3438 (1215.3 bits), Expect = 0., P = 0.
Identities = 670/948 (70%), Positives = 760/948 (80%)
Query: 9 EAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGF 68
+ + KE VDLE +P++EVF+ L+C++EGLS+E RL IFG NKLEEK E+K LKFLGF
Sbjct: 8 DEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGF 67
Query: 69 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXXX 128
MWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAAAAL 127
Query: 129 XXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 188
PK+KVLRDG+W E++AAILVPGD+IS+KLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248
SLP TK GD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLTAIG
Sbjct: 188 SLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EII+MYPIQHRKYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAAR 368
S QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIE+F+K VD D V+L++AR
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSAR 367
Query: 369 ASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKG 428
ASRVENQDAID +IV ML DPKEARA I EVHFLPFNP +KRTA+TYID+ G+ HR SKG
Sbjct: 368 ASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKG 427
Query: 429 APEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMP 488
APEQI+ L K E +RR H IIDKFAERGLRSL VA Q VP+ KES+G PW+F+GL+P
Sbjct: 428 APEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE 548
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LL +NKD+
Sbjct: 488 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDD 546
Query: 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXX 608
+ +PVDELIEKADGFAGVFPEHKYEIV++LQ RKHI GMTGDGVNDAPALKK
Sbjct: 547 TTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIA 606
Query: 609 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+A
Sbjct: 607 VDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVA 666
Query: 669 LIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMT 728
LIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKL EIF TGV+LG Y+A++T
Sbjct: 667 LIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMALVT 726
Query: 729 VIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFV 788
V+FFW A+ T FF FGV SL KD ++L + +YLQVS ISQALIFVTR+RSWSFV
Sbjct: 727 VVFFWLAHDTTFFSDKFGVRSLQGKD----EELIAVLYLQVSIISQALIFVTRSRSWSFV 782
Query: 789 DRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFF 848
+RPG TLIA YA+W FA I+ +Y+++ YIPLD +KF
Sbjct: 783 ERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFI 842
Query: 849 IRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFT 908
RY LSGKAW+ +IE R AFT KKD+G+ ERE +WA AQRTLHGL P++ MF + +T
Sbjct: 843 TRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES-MFEDTATYT 901
Query: 909 ELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
EL+++ ++TLKGHVESVV+LKGLDID + Q YTV
Sbjct: 902 ELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3346 (1182.9 bits), Expect = 0., P = 0.
Identities = 658/961 (68%), Positives = 749/961 (77%)
Query: 6 ETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKF 65
E ++A+ E++DLENVP+EEVF+ L+C KEGL++ +ERLT+FGYNKLEEK+ESKILKF
Sbjct: 5 EALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKF 64
Query: 66 LGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXX 125
LGFMWNPLSWVME +GGGKP D+ DFVGIV LLLINSTISF+EE
Sbjct: 65 LGFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAA 124
Query: 126 XXXXXXXXPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSAL 185
PK+K +RDGKW E DAA LVPGDI+S+KLGDIIPADARLLEGDPLKIDQ+ L
Sbjct: 125 AALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATL 184
Query: 186 TGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLT 245
TGESLPVTK PG SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST GHFQKVLT
Sbjct: 185 TGESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLT 244
Query: 246 AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
AIGNFCICSIAVGM +EI+V+Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+
Sbjct: 245 AIGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGA 304
Query: 306 HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLM 365
HRL+ QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE+F +G+D D VLM
Sbjct: 305 HRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLM 364
Query: 366 AARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRV 425
AARA+R+ENQDAID AIV ML+DPKEARA I+E+HFLPF+P ++RTALTY+D EGKMHRV
Sbjct: 365 AARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRV 424
Query: 426 SKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIG 485
SKGAPE+IL++ NK EI+ +VHA IDKFAERGLRSL +AYQEVPDG + GGPW F+
Sbjct: 425 SKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVA 484
Query: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQN 545
L+PLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAIAKETGRRLGMGTNMYPSS+LL N
Sbjct: 485 LLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDN 544
Query: 546 KDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXX 605
E + VDELIE ADGFAGVFPEHKYEIVKRLQ+RKHICGMTGDGVNDAPALKK
Sbjct: 545 NTEGV---SVDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADI 601
Query: 606 XXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+GFM
Sbjct: 602 GIAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFM 661
Query: 666 LLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 725
LL + W+FDFPPFMVL+IAILNDGTIMTISKDRVKPSP PD WKL EIF TGV+LG YLA
Sbjct: 662 LLCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLA 721
Query: 726 MMTVIFFWAAYQTDFFPRTFGVSSL--HEKDIDDWK-------KLASAIYLQVSTISQAL 776
+MTV+FFWAAY+T+FF F V + H + D K ++ASA+YLQVSTISQAL
Sbjct: 722 IMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQAL 781
Query: 777 IFVTRARSWSFVDRPGXXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNL 836
IFVTR+RSWSFV+RPG ++I+ ANW FA I ++N+
Sbjct: 782 IFVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNI 841
Query: 837 IFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAP 896
+ Y+ LD IKF +RYALSGK+WD ++E R A T KK+FG+EER WA +RT HGL
Sbjct: 842 VTYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETG 901
Query: 897 DTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDI-DTIQQSYT 955
++ E N TELN M L TLKG VES +LKG D+ D +YT
Sbjct: 902 QKPVY-ERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYT 960
Query: 956 V 956
+
Sbjct: 961 I 961
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3078 (1088.6 bits), Expect = 0., P = 0.
Identities = 610/944 (64%), Positives = 723/944 (76%)
Query: 13 KEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNP 72
++ +DL +P+EEVFE LR + +GL + AEERL IFG N+LEEKQE++ +KFLGFMWNP
Sbjct: 17 RKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGFMWNP 76
Query: 73 LSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVTLLLINSTISFIEEXXXXXXXXXXXXXX 132
LSWVME N PDW+DF GIV LLLIN+TISF EE
Sbjct: 77 LSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAALMARL 136
Query: 133 XPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPV 192
K++VLRDG+W E+DA+ILVPGDIIS+KLGDIIPADARLLEGDPLKIDQS LTGESLPV
Sbjct: 137 ALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGESLPV 196
Query: 193 TKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFCI 252
TK G+ V+SGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IGNFCI
Sbjct: 197 TKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIGNFCI 256
Query: 253 CSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQG 312
CSIAVGM++EII+M+P+QHR YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRLS QG
Sbjct: 257 CSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQG 316
Query: 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV 372
AITKRMTAIEEMAGMDVLC DKTGTLTLN L+VDKNLIE+F +D D ++L+A RASR+
Sbjct: 317 AITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRL 376
Query: 373 ENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQ 432
ENQDAIDAAIV MLADP+EARANI+E+HFLPFNP DKRTA+TYIDS+GK +R +KGAPEQ
Sbjct: 377 ENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQ 436
Query: 433 ILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDP 492
+LNL + K+EI +RV+AIID+FAE+GLRSLAVAYQE+P+ S GGPW+F GL+PLFDP
Sbjct: 437 VLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDP 496
Query: 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVA 552
PRHDS ETI RAL+LGV VKMITGDQLAIAKETGRRLGMGTNMYPSS+LLG N DE A
Sbjct: 497 PRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EA 555
Query: 553 LPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXX 612
+PVDELIE ADGFAGVFPEHKYEIVK LQ KH+ GMTGDGVNDAPALKK
Sbjct: 556 IPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADA 615
Query: 613 XXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK 672
VLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIVLGF LLALIW+
Sbjct: 616 TDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWE 675
Query: 673 FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFF 732
+DFPPFMVLIIAILNDGTIMTISKDRV+PSP P+SWKL +IF TG+++G YLA++TV+F+
Sbjct: 676 YDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVTVLFY 735
Query: 733 WAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPG 792
W T FF + F V S+ ++++SA+YLQVS ISQALIFVTR+R WSF +RPG
Sbjct: 736 WIIVSTTFFEKHFHVKSIANNS----EQVSSAMYLQVSIISQALIFVTRSRGWSFFERPG 791
Query: 793 XXXXXXXXXXXXXXTLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYA 852
TLIAVYAN SFA I LY+LIFYIPLD IKF YA
Sbjct: 792 TLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYA 851
Query: 853 LSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQ 912
LSG+AW+LV++++ AFT KKD+GK++ +QR+ ++ + +
Sbjct: 852 LSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRSRSAEELRGSR--------SRASW 903
Query: 913 MXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 956
+ ++++ H+ESV++LK +D I+ ++TV
Sbjct: 904 IAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.7970 | 0.9884 | 0.9968 | no | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.8880 | 1.0 | 1.0 | no | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8010 | 0.9937 | 0.9978 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4248 | 0.8158 | 0.9689 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7182 | 0.9738 | 0.9831 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8952 | 0.9989 | 0.9979 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.8974 | 1.0 | 1.0 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.7951 | 0.9884 | 0.9936 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.7790 | 0.9937 | 0.9958 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.7837 | 0.9853 | 0.9926 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.7821 | 0.9884 | 0.9957 | no | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8974 | 1.0 | 1.0 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7575 | 0.9905 | 0.9854 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.7921 | 0.9843 | 0.9926 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8891 | 1.0 | 0.9958 | yes | no |
| P54679 | PMA1_DICDI | 3, ., 6, ., 3, ., 6 | 0.4785 | 0.8880 | 0.8024 | yes | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8088 | 0.9884 | 0.9936 | no | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.7901 | 0.9905 | 0.9978 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.7873 | 0.9884 | 0.9957 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.9005 | 0.7364 | 1.0 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.XII.988.1 | autoinhibited H+ ATPase (966 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| grail3.0023015401 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| fgenesh4_pm.C_LG_II000842 | inorganic pyrophosphatase (EC-3.6.1.1) (215 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_VII001101 | SubName- Full=Putative uncharacterized protein; (213 aa) | • | 0.899 | ||||||||
| eugene3.00090843 | inorganic pyrophosphatase (EC-3.6.1.1) (298 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pm.C_LG_XIV0223 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIII0040 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1520062 | SubName- Full=Putative uncharacterized protein; (768 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1330100 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_X3050 | vacuolar H+-translocating inorganic pyrophosphatase (636 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_I4261 | SubName- Full=Putative uncharacterized protein; (296 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 956 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-178 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-115 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-89 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 9e-83 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-79 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-73 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-70 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-68 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 8e-64 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 9e-64 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 1e-57 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-55 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-55 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 7e-40 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-39 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-33 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 6e-33 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 7e-31 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 7e-31 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 3e-30 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-30 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-26 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 7e-22 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 8e-19 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 2e-16 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 2e-12 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 5e-09 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 5e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 4e-07 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 7e-05 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 7e-04 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1183 bits (3063), Expect = 0.0
Identities = 459/779 (58%), Positives = 558/779 (71%), Gaps = 27/779 (3%)
Query: 36 GLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95
GL++ A++RL +G N+L EK+ S +LKFLGF WNPLSWVMEAAAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPG 155
W DFV I+ LLL+N+TI FIEEN AGNA AL SLAPK++VLRDGKW E A+ LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVV 215
D++ +K+GDI+PAD RL EGD +++DQ+ALTGESLPVTK GD YSGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 216 IATGVHTFFGKAAHLVDSTNQQ-GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKY 274
ATG++TFFGKAA LV ST GH QK+L+ IG F I I V +++E++V++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334
R G+ LVLL+GGIPIAMP VLSVTMA+G+ L+ + AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394
TGTLTLNKLS+D+ L F G D D V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 395 NIQEVHFLPFNPTDKRTALTYIDSE-GKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDK 453
+ + F+PF+P DKRT T D E GK +V+KGAP+ IL+L NK EIE +V +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKM 513
A RG R+L VA G W F+GL+PLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 514 ITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK 573
+TGD LAIAKET RRLG+GTN+Y + LL + + + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLGEMVEDADGFAEVFPEHK 522
Query: 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633
YEIV+ LQ R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 634 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMT 693
A+L SR IFQRMK+Y IY ++ TIRIV F LL LI F FPP MV+IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 694 ISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEK 753
I+ D VKPS LP W L E+FT +LG YL + T + A T FF FG+ LH
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLLHG- 701
Query: 754 DIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVY 812
L S IYLQVS A IFVTR + + +RPG LL AF +AQ+IAT IAVY
Sbjct: 702 ------NLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 540 bits (1394), Expect = e-178
Identities = 266/913 (29%), Positives = 419/913 (45%), Gaps = 92/913 (10%)
Query: 11 VLKEAVDLENVPMEEVFETLRCNK-EGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGF 68
V E +V E+ L + GLS E + RL +G N+L EEK+ S + KFL
Sbjct: 18 VTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQ 77
Query: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAAL 128
+P ++ AA+++ + G D + I+ +++IN+ + F++E A A AL
Sbjct: 78 FKDPFIILLLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL 134
Query: 129 MASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGE 188
+PK+KVLRDGK++E A+ LVPGDI+ ++ GD++PAD RLLE L++D+SALTGE
Sbjct: 135 KKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGE 194
Query: 189 SLPVTKGPGDS--------------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234
SLPV K ++SG+T G + +V+ATG T FGK A L+ +
Sbjct: 195 SLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254
Query: 235 NQ-QGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNL----LVLLIGGI 289
+ + Q+ L +G F + V +V +++ + + G+ L L + +
Sbjct: 255 KEVKTPLQRKLNKLGKF----LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAV 310
Query: 290 PIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 349
P +P V+++ +A+G+ R++ AI + + AIE + +DV+CSDKTGTLT NK++V K
Sbjct: 311 PEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIY 370
Query: 350 I-----EIFAKGVDADAVVLMAARASRVEN------------QDAIDAAIV------GML 386
I +I K + +L A+ + N D + A+V G
Sbjct: 371 INGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFS 430
Query: 387 ADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILN-------LVRN 439
D + +PF+ KR ++ EGK KGAPE IL L
Sbjct: 431 LDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPL 490
Query: 440 KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQ----FIGLMPLFDPPRH 495
E R + + + A GLR LAVAY+++ K+ + F+GL + DPPR
Sbjct: 491 TEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPRE 550
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ---NKDESIVA 552
D E I G+ V MITGD + A + G+ + + G + +A
Sbjct: 551 DVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELA 610
Query: 553 LPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD- 611
EL+E+ FA V PE K IV+ LQ H+ MTGDGVNDAPALK AD+GIA+
Sbjct: 611 ----ELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE 666
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIW 671
TDAA+ A+DIVL + + I+ AV+ R ++ +K + +Y +S + VL ++ +L
Sbjct: 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFN 726
Query: 672 KFDFP--PFMVLIIAILNDGTI---MTISK---DRVKPSPLPDSWKLAEIFTTGVILGGY 723
F P P +L I +L D + + D +K P +F +
Sbjct: 727 LFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRG---PEEGLFNRKIFWRFI 783
Query: 724 L--AMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTR 781
L +++ I F + + F ++L L + + + I L R
Sbjct: 784 LIIGLLSAILFILTFL--LYLLGFIANTLGLDLFQA--LLQTTAFTVLVLIQLLLTLAVR 839
Query: 782 ARS---WSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIF 838
+R S + L LA V ++ LI + + WL +
Sbjct: 840 SRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLF--EWLIAIAV 897
Query: 839 YIPLDFIKFFIRY 851
+ L +I Y
Sbjct: 898 ALLLLYIVVSELY 910
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 363 bits (933), Expect = e-115
Identities = 183/588 (31%), Positives = 282/588 (47%), Gaps = 78/588 (13%)
Query: 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPKSK--VLRDGKWMEEDAAILVPGDIISV 160
I+ L+L+ + ++ A + +L L VLR+G W E A LVPGD++ V
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDSVYSGSTCKQGE 210
K G+ +PAD LL G +D+S LTGES PV K GD V++G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 211 IEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI 269
+ VV TG+ T G+ A +V + + Q + NF I + + ++ + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 270 QH----RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMA 325
+ L++L+ +P A+P ++V +A+G RL+ +G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 326 GMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGM 385
+D LCSDKTGTLT NK+++ + I D + ++ D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALLKS 294
Query: 386 LADPKEARANIQE---VHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSE 442
+A +E + PF+ KR ++ +G KGAPE IL N E
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNNYEE 354
Query: 443 IERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIR 502
+ A +GLR LA A +E+ D +F+GL+ DP R D+ ETI
Sbjct: 355 -------KYLELARQGLRVLAFASKELEDD--------LEFLGLITFEDPLRPDAKETIE 399
Query: 503 RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562
G+ V MITGD + AK + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 563 DGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622
D FA V PE K +IV+ LQ + HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALI 670
VL + LS I+ AV R IF +K+ +A++ + ++ +LL +I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI 531
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 303 bits (777), Expect = 5e-89
Identities = 215/742 (28%), Positives = 353/742 (47%), Gaps = 99/742 (13%)
Query: 22 PMEEVFETLRCNKE-GL-STEAAEERLTIFGYNKLE-EKQESKILKFLG-FMWNPLSWVM 77
+EE L+ + + GL S++ A R G+N+ + E+ ES KFL F+ NPL ++
Sbjct: 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 78 EAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSK 137
A+A++++ + N D V I +LI T+ F++E + + AL + P+
Sbjct: 68 IASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECH 120
Query: 138 VLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG-- 195
++R+GK A+ LVPGD++ + +GD +PAD R++E L ID+S LTGE+ PV+K
Sbjct: 121 LIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTA 180
Query: 196 ------PGD------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-QGHFQK 242
GD + G+ + G + +V+ TG +T FG ++ + + + QK
Sbjct: 181 PIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQK 240
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
+ +G + ++ G+I I ++ Q + + + L + IP +P +++VT+A
Sbjct: 241 SMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLA 299
Query: 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK--------NLIEIFA 354
+G R+S + AI +++ ++E + ++V+CSDKTGTLT N ++V K ++ +
Sbjct: 300 LGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS 359
Query: 355 ----KGVDADAVVLMAARASRVENQ---------------------DAIDAAIVGMLA-- 387
V D VL V + D A++ +L
Sbjct: 360 LNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKF 419
Query: 388 ---DPKEARANIQEVHFLPFNPTDK--RTALTYIDSEGKMHRVSKGAPEQILNLVRNKSE 442
D +E + EV PF+ K + +M + KGA EQ+L +
Sbjct: 420 GLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFM-KGAYEQVLKYCTYYQK 475
Query: 443 IERRVHAIID-----------KFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFD 491
+ + + + A GLR +A A G F+GL+ + D
Sbjct: 476 KDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--------PEKGQLTFLGLVGIND 527
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE-SI 550
PPR E + + GV + MITGD A RRLGM S ++ G+ D
Sbjct: 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEKLDAMDD 585
Query: 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
L +++ K FA PEHK +IVK LQ R + MTGDGVNDAPALK ADIG+A+
Sbjct: 586 QQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMG 643
Query: 611 D-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL 669
TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L + LA
Sbjct: 644 QTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALSLIALAT 702
Query: 670 IWKFDFP--PFMVLIIAILNDG 689
+ F P +L I IL DG
Sbjct: 703 LMGFPNPLNAMQILWINILMDG 724
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 285 bits (731), Expect = 9e-83
Identities = 205/758 (27%), Positives = 341/758 (44%), Gaps = 108/758 (14%)
Query: 22 PMEEVFETLRCNKEGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWVMEAA 80
E + L ++ GL+ ERL FG N+ EEK+ + + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 81 AIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR 140
+M ++ D + V I ++L + + FI+E+ A AA AL + + VLR
Sbjct: 77 MLMGVSYLT-----DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLR 131
Query: 141 ------DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPV-- 192
+G E LVPGD+I + GDIIPADAR++ L I+QSALTGESLPV
Sbjct: 132 VINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEK 191
Query: 193 ---TKGPGDS--------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQ 241
K D + G+ G +AVV+ATG T+FG A Q F
Sbjct: 192 FVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFD 251
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGI------------ 289
K + S++ +I ++VM P+ VL+I G+
Sbjct: 252 K--------GVKSVSKLLIRFMLVMVPV-------------VLMINGLMKGDWLEAFLFA 290
Query: 290 --------PIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN 341
P +P ++S +A G+ +S + I K ++AI+ MD+LC+DKTGTLT +
Sbjct: 291 LAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQD 350
Query: 342 KLSVDKNLIEIFAKGVDADAVVLMAARASRVEN--QDAIDAAIVGMLAD--PKEARANIQ 397
K+ ++K+ I + G ++ V+ MA S + ++ +D A++ L + ++ + +
Sbjct: 351 KIELEKH---IDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWK 407
Query: 398 EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSE----------IERRV 447
+V +PF+ +R ++ + + KGA E++L + +K + +
Sbjct: 408 KVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSEL 467
Query: 448 HAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFI--------GLMPLFDPPRHDSAE 499
+ + +G+R +AVA + + + G + DPP+ + E
Sbjct: 468 QDMTAEMNRQGIRVIAVATKTLK-----VGEADFTKTDEEQLIIEGFLGFLDPPKESTKE 522
Query: 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELI 559
I G+NVK++TGD + + +G+ N + A + + DE + +
Sbjct: 523 AIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARE-----L 577
Query: 560 EKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 619
K FA + P K I+ L+ H G GDG+NDAPAL+KAD+GI+V A D A+ A
Sbjct: 578 RKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637
Query: 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFP--P 677
SDI+L E L V+ V+ R F + Y S V ++ + F P
Sbjct: 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPF-LPMLS 696
Query: 678 FMVLIIAILNDGTIMTISKDRVKPSPL--PDSWKLAEI 713
+LI +L D + +T+ D++ L P W+ +
Sbjct: 697 LHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQWEQKGM 734
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 277 bits (711), Expect = 1e-79
Identities = 204/701 (29%), Positives = 327/701 (46%), Gaps = 106/701 (15%)
Query: 13 KEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMW-- 70
+ +P EE+++T + EGL+ E G N+L ++ L W
Sbjct: 44 ARCLKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVC 100
Query: 71 --NPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAAL 128
NP + ++ ++ A D I ++ I++ ++FI+E + AA AL
Sbjct: 101 YRNPFNILLTILGAISYATE-------DLFAAGVIALMVAISTLLNFIQEARSTKAADAL 153
Query: 129 MASLAPKSKVLR------DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182
A ++ + VLR + W+E LVPGDII + GD+IPAD R+L+ L + Q
Sbjct: 154 KAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQ 213
Query: 183 SALTGESLPVTK--GPGDS-----------VYSGSTCKQGEIEAVVIATGVHTFFGKAAH 229
++LTGESLPV K + G+ G +AVVIATG +T+FG+ A
Sbjct: 214 ASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAG 273
Query: 230 LVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGG 288
V ++ FQ+ I ++ +I ++VM P+ VLLI G
Sbjct: 274 RVSEQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV-------------VLLING 312
Query: 289 --------------------IPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMD 328
P +P +++ T+A G+ +LS Q I KR+ AI+ MD
Sbjct: 313 YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMD 372
Query: 329 VLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVEN--QDAIDAAIVGML 386
+LC+DKTGTLT +K+ ++ + +I G ++ V+ A S + ++ +D A++ +
Sbjct: 373 ILCTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGV 429
Query: 387 ADPKEAR--ANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNL---VRNKS 441
+ + Q++ +PF+ +R ++ ++ + KGA E+ILN+ VR+
Sbjct: 430 DEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNG 489
Query: 442 EIE-------RRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQ---FIGLMPLFD 491
EI RR+ + D +GLR +AVA + +P + G + D
Sbjct: 490 EIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLD 549
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIV 551
PP+ +A ++ GV VK++TGD +A + +G+ L+G + I
Sbjct: 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIGSD----IE 601
Query: 552 ALPVDEL---IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
L DEL E+ FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIGI+
Sbjct: 602 TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGIS 661
Query: 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
V A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 662 VDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (666), Expect = 2e-73
Identities = 206/698 (29%), Positives = 324/698 (46%), Gaps = 108/698 (15%)
Query: 22 PMEEVFETLRCNKEGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWV-MEA 79
+EE L +++GL+ E A ERL +G N++ EK +++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 80 AAI---MAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKS 136
AAI L G+ D + I+T++L++ + F +E + AA AL A + +
Sbjct: 91 AAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 137 KVLR------DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESL 190
VLR + E LVPGDI+ + GD+IPAD RL+E L I Q+ LTGE+L
Sbjct: 151 TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEAL 210
Query: 191 PVTK--------------GPGDSV---------YSGSTCKQGEIEAVVIATGVHTFFGKA 227
PV K D + G+ G AVV+ATG T+FG
Sbjct: 211 PVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270
Query: 228 AHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIG 287
A + T Q F + + S++ +I ++VM P+ VLLI
Sbjct: 271 AKSIVGTRAQTAFDR--------GVNSVSWLLIRFMLVMVPV-------------VLLIN 309
Query: 288 GI--------------------PIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGM 327
G P +P ++S +A G+ ++ + + KR+ AI+ M
Sbjct: 310 GFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAM 369
Query: 328 DVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVEN--QDAIDAAIV-- 383
DVLC+DKTGTLT +++ ++ +L G + V+ +A S ++ ++ +D A+V
Sbjct: 370 DVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAF 426
Query: 384 GMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNL------- 436
A ++V LPF+ +R ++ D++G+ + KGA E++L +
Sbjct: 427 AEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDG 486
Query: 437 --VRNKSEIER-RVHAIIDKFAERGLRSLAVAYQEVPDG---RKESSGGPWQFI--GLMP 488
VR E R R+ A+ + + G R L VA +E+P G + S+ + G +
Sbjct: 487 DTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLT 546
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE 548
DPP+ +A I GV VK++TGD + + R +G+ P LLG
Sbjct: 547 FLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE--- 599
Query: 549 SIVALPVDEL---IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605
I A+ L +E+ FA + P K ++K LQA H G GDG+NDAPAL+ AD+
Sbjct: 600 -IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADV 658
Query: 606 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643
GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 659 GISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 2e-70
Identities = 229/921 (24%), Positives = 375/921 (40%), Gaps = 173/921 (18%)
Query: 79 AAAIMAIALA---NGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPK 135
AA ++ LA G + + I+ +L+ N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 136 SKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195
+KVLRDG+W A LVPGDI+ + +GD +PAD R+L L++DQS LTGES+ V K
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 196 ----PGDS---------VYSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQQGHFQ 241
P + ++SG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQH--------RKYRPGIDNLLV---LLIGGIP 290
K L G + S +G+I ++ + I H + I + L + IP
Sbjct: 195 KKLDEFGE--LLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIP 252
Query: 291 IAMPTVLSVTMAIGSHRLSLQ------------------------GAITKRMTAIEEMAG 326
+P V++ +A+G+ +++ + G +T ++ ++
Sbjct: 253 EGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVA 312
Query: 327 MD-VLCSDKTGTLTLNKLSVDKNLIE---IFAKGVDA-------------DAVVLMAARA 369
+D S +T + + +I+ A G DA D+ + R
Sbjct: 313 LDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERK 372
Query: 370 SRVENQ-DAIDAA-------------IVGMLADPKEA-------RANIQEVHFLPFNPTD 408
E +A +AA G+ + + A +++ L F +
Sbjct: 373 GVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEF--SR 430
Query: 409 KRTALTYIDSEGKMHRV-SKGAPEQIL---NLVRNKSE--------IERRVHAIIDKFAE 456
R +++ + +++ KGAPE +L + N ++ + ++I +
Sbjct: 431 DRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGT 490
Query: 457 R-GLRSLAVAYQEVPDGRKESSGGPWQ----------FIGLMPLFDPPRHDSAETIRRAL 505
LR LA+A++++PD R+E FIG++ + DPPR + A+ I +
Sbjct: 491 TKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550
Query: 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG- 564
G+ V MITGD A+ RR+G+ P +S DE+
Sbjct: 551 TAGIRVIMITGDNKETAEAICRRIGI---FSPDED----VTFKSFTGREFDEMGPAKQRA 603
Query: 565 -------FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
F+ V P HK E+V+ LQ + I MTGDGVNDAPALKKADIGIA+ T+ A+
Sbjct: 604 ACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAK 663
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLLALIWKFDFP 676
ASD+VL + + I++AV RAI+ MK + Y +S I +V F+ AL
Sbjct: 664 EASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLI 723
Query: 677 PFMVLIIAILNDG-------------TIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGY 723
P +L + ++ DG IM R PL W +F +++G Y
Sbjct: 724 PVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPD-EPLITGW----LFFRYLVVGVY 778
Query: 724 LAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTIS-QALIFVTRA 782
+ + TV F Y F S D +D TIS L+ +
Sbjct: 779 VGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMF 838
Query: 783 RSWSFVDRPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVGWGWAGVVWLYNLIFYIP 841
+ + + LL + + N W AI + L+ LI Y+P
Sbjct: 839 NALNALSEDQSLLR------------MPPWVNKWLIGAI-------CLSMALHFLILYVP 879
Query: 842 LDFIKFFIRYALSGKAWDLVI 862
+ F LS W +V+
Sbjct: 880 F-LSRIFGVTPLSLTDWLMVL 899
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 246 bits (629), Expect = 2e-68
Identities = 180/704 (25%), Positives = 306/704 (43%), Gaps = 82/704 (11%)
Query: 34 KEGLSTEAAEE--RLTIFGYNKLEEKQESKILKFLGFMWNPLSWVM----EAAAIMAIAL 87
EG+ ++ R ++G N+L EK FL +W LS AA++++ L
Sbjct: 57 NEGVRLSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLILLSVAAVVSLVL 113
Query: 88 A------NGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALM-ASLAPKSKVLR 140
W + V I+ +++ ++ + + L A K V+R
Sbjct: 114 GLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIR 173
Query: 141 DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSV 200
G+ + +V GDI+S+ GD++PAD + G L+ID+S++TGES P+ KGP
Sbjct: 174 GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDP 233
Query: 201 Y--SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQQGHFQKVLTAIGNFCIC 253
+ SG+ +G +V A GV++F GK + DST Q ++ IG F +
Sbjct: 234 FLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMG 293
Query: 254 SIAVGMIVEII--VMYPIQHRKYRPGID-----NLLVLLIGGIPIAMPTVL--SVTMAI- 303
S + +V + V I+ D + ++ + + +A+P L +VT+A+
Sbjct: 294 SAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALA 353
Query: 304 -GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLI-----------E 351
++ + + + A E M +CSDKTGTLT N +SV + I
Sbjct: 354 YSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLR 413
Query: 352 IFAKGVDADAVVLMAARASRVENQDA----------IDAAIVGM----LADPKEARANIQ 397
K V V ++ +S E D + A++ L D +E RA +
Sbjct: 414 NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEK 473
Query: 398 EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQIL-----------NLVRNKSEIERR 446
V PFN K ++ S GK KGA E +L + + R
Sbjct: 474 VVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDR 533
Query: 447 VHAIIDKFAERGLRSLAVAYQEVPDG---RKESSGGPWQFIGLMPLFDPPRHDSAETIRR 503
+I+ A LR++ +AY++ RK+ IG++ + DP R E ++
Sbjct: 534 CADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQE 593
Query: 504 ALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKAD 563
G+ V+M+TGD + AK R G+ T + + S+V +D ++ K
Sbjct: 594 CQRAGITVRMVTGDNIDTAKAIARNCGILT---FGGLAMEGKEFRSLVYEEMDPILPKLR 650
Query: 564 GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARSASDI 622
A P K +V L+ + +TGDG NDAPALK AD+G ++ + T+ A+ ASDI
Sbjct: 651 VLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDI 710
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIV 661
+L + + I+ AV R ++ ++ + T+ V++ + V
Sbjct: 711 ILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 754
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 8e-64
Identities = 145/580 (25%), Positives = 241/580 (41%), Gaps = 76/580 (13%)
Query: 103 IVTLLLINSTISFIEENNAGNAAAAL--MASLAPKS--KVLRDGKWMEEDAAILVPGDII 158
LL + +EE G A+ AL + +LAP + + DG E L GDI+
Sbjct: 21 GALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIV 80
Query: 159 SVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIAT 218
V+ G+ IP D ++ G+ +D+SALTGES+PV K GD V++G+ G + V
Sbjct: 81 IVRPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKL 139
Query: 219 GVHTFFGKAAHLV-DSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPG 277
G + + LV ++ + + Q++ I ++ + ++ ++ +V +
Sbjct: 140 GEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---GALGA 196
Query: 278 IDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335
+ L +L+ P A+ L+ +AI + +G + K A+E++A + + DKT
Sbjct: 197 LYRALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254
Query: 336 GTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARAN 395
GTLT K +V IE ++ +L A A + + AIV A
Sbjct: 255 GTLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV--------RYAK 304
Query: 396 IQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILN--LVRNKSEIERRVHAIIDK 453
+ + D + + +G V G +I N + E ++++
Sbjct: 305 KRGLE--LPKQED----VEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNE 358
Query: 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV-NVK 512
+G + VA + +G++ L D R ++ E I G +
Sbjct: 359 GESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLV 405
Query: 513 MITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572
M+TGD + A+ LG +DE+ A + PE
Sbjct: 406 MLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPED 435
Query: 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632
K IVK LQ + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS +
Sbjct: 436 KLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSL 495
Query: 633 ISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFMLLALIW 671
+A+ SR + +K N + I L L +W
Sbjct: 496 PTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 9e-64
Identities = 157/580 (27%), Positives = 238/580 (41%), Gaps = 87/580 (15%)
Query: 101 VGIVTLLLINSTISFIEENNAGNAAAALMASLAPKS--KVLRDGKWMEEDAAILVPGDII 158
++ L L+ + + A A AL+ LAPK+ V DG+ E + GDI+
Sbjct: 178 AMLIFLFLLGRYLEARAKGRARRAIRALLD-LAPKTATVVRGDGEEEEVPVEEVQVGDIV 236
Query: 159 SVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIAT 218
V+ G+ IP D ++ G +D+S LTGESLPV K PGD V++G+ G + V
Sbjct: 237 LVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRV 295
Query: 219 GVHTFFGKAAHLV-DSTNQQGHFQKVLTAI-GNFCICSIAVGMIVEIIVMYPIQHRKYRP 276
G T + LV ++ + + Q++ + F + + + + +
Sbjct: 296 GADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIA-ALTFALWPLFGGGDWET 354
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334
+ L +L+ P A+ L+ AI G R + +G + K A+E +A +D + DK
Sbjct: 355 ALYRALAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDK 412
Query: 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394
TGTLT K V ++ A D D ++ +AA + + AIV K A
Sbjct: 413 TGTLTEGKPEV----TDVVALDGDEDELLALAAALEQHSEH-PLAKAIV------KAAAE 461
Query: 395 -NIQEVHFLPFNPTDKRTALTYIDSEG-----KMHRVSKGAPEQILNLVRNKSEIERRVH 448
+ +V I G RV G L+ + +
Sbjct: 462 RGLPDV-----------EDFEEIPGRGVEAEVDGERVLVGNAR----LLGEEGIDLPLLS 506
Query: 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLG 508
I+ G + VA DG+ +G++ L D R D+ E I LG
Sbjct: 507 ERIEALESEGKTVVFVAV----DGK---------LVGVIALADELRPDAKEAIAALKALG 553
Query: 509 VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568
+ V M+TGD A+ + LG +DE+ A +
Sbjct: 554 IKVVMLTGDNRRTAEAIAKELG------------------------IDEV------RAEL 583
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
PE K EIV+ LQA M GDG+NDAPAL AD+GIA+ TD A A+D+VL
Sbjct: 584 LPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDD 643
Query: 629 LSVIISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFMLL 667
LS + A+ SRA + +K N I I L L
Sbjct: 644 LSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGL 683
|
Length = 713 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 1e-57
Identities = 78/223 (34%), Positives = 132/223 (59%), Gaps = 4/223 (1%)
Query: 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPK-SKVLRDGKWMEEDAAILVPGDIISVK 161
I+ L+LIN+ + +E A A AL L P + V+RDGK E A LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVH 221
GD +PAD R++EG L++D+SALTGESLPV K GD+V++G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 222 TFFGKAAHLV-DSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDN 280
T GK A LV ++ + + Q++L + + I + + + + +++ + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEE 323
L +L+ P A+P + + +A+G+ RL+ +G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 200 bits (512), Expect = 4e-55
Identities = 149/596 (25%), Positives = 245/596 (41%), Gaps = 107/596 (17%)
Query: 73 LSWVMEAAAIMAIALANGGGKPPDWQD-FVGIVTLLLINSTISFIEENNAGNAAAAL--M 129
+++ A++A G + D ++T +L+ ++E G A+ AL +
Sbjct: 30 VAYGYSLVALLA-NQVLTGLHVHTFFDASAMLITFILLGR---WLEMLAKGRASDALSKL 85
Query: 130 ASLAPKS--KVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 187
A L P + + DG+ E +L PGDI+ V G+ IP D ++EG+ ++D+S +TG
Sbjct: 86 AKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTG 144
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQ---------- 237
ESLPV K GD V +G+ G + ATG T + LV Q
Sbjct: 145 ESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADK 204
Query: 238 --GHFQKVLTAIGNFCICS-IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIG---GIPI 291
G+F V+ AI + +G + + VL+I + +
Sbjct: 205 VAGYFVPVVIAIALITFVIWLILGADFVFALEVAVT------------VLIIACPCALGL 252
Query: 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE 351
A PTV+ A+ + + G + K A+E A +D + DKTGTLT K +V +
Sbjct: 253 ATPTVI----AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV--TDVH 306
Query: 352 IFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRT 411
+F + + + L AA + E+ + AIV K + +V
Sbjct: 307 VFGESDRDELLALAAALEAGSEH--PLAKAIVSYA---KAKGITLSQV--------SDFK 353
Query: 412 ALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD 471
A+ I EG + I + N+ + + E + +
Sbjct: 354 AIPGIGVEGTVE------GHTIQ--LGNEKLLG---ENGLKTDGEVEEGGGTTSVLVAVN 402
Query: 472 GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531
G + G++ L D + ++ E I+ G+ M+TGD AK + LG
Sbjct: 403 G---------ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG- 452
Query: 532 GTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTG 591
IE + A V P+ K ++K+LQ + + M G
Sbjct: 453 ---------------------------IE--NVRAEVLPDDKAALIKKLQEKGKVVAMVG 483
Query: 592 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
DG+NDAPAL +AD+GIA+ TD A A+D+VL L+ + +A+ SR +R+K
Sbjct: 484 DGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 4e-55
Identities = 195/808 (24%), Positives = 342/808 (42%), Gaps = 138/808 (17%)
Query: 4 KAETMEAVLKE-AVDLENVPMEEVFETLRCNKE-GLSTEAAEERLTIFGYNKLEE-KQES 60
K ++ + KE +D + ++E+ + GLS A E L G N L
Sbjct: 2 KKRDLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTP 61
Query: 61 KILKFLGFMWNPLSWVMEAAAIMA-IAL---ANGGGKPPDWQDFVGIV--TLLLINSTIS 114
+ +KF ++ S ++ AI+ +A A+ +P + ++G+V +++I S
Sbjct: 62 EWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFS 121
Query: 115 FIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE 174
+ +E + + + ++ V+RDG+ M +A +V GD++ VK GD IPAD R++
Sbjct: 122 YYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIIS 181
Query: 175 GDPLKIDQSALTGESLPVTKGPG----------DSVYSGSTCKQGEIEAVVIATGVHTFF 224
K+D S+LTGES P T+ P + + + C +G +V+ TG T
Sbjct: 182 AQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVM 241
Query: 225 GKAAHLVDSTNQQG--------HFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRP 276
G+ A L HF ++T + F S I+ +I+ Y +
Sbjct: 242 GRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGY-----TWLE 293
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTG 336
+ L+ +++ +P + ++V + + + R++ + + K + A+E + +CSDKTG
Sbjct: 294 AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 353
Query: 337 TLTLNKLSV-----DKNLIE----------IFAKG----VDADAVVLMAARASRVENQDA 377
TLT N+++V D + E F K + + + RA Q+
Sbjct: 354 TLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQEN 413
Query: 378 I---------DAAIVGML-------ADPKEARANIQEVHFLPFNPTDKR--TALTYIDSE 419
+ DA+ +L E R +V +PFN T+K + D
Sbjct: 414 VPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPR 473
Query: 420 GKMH-RVSKGAPEQILN-----LVRNK-----SEIERRVHAIIDKFAERGLRSLAVAYQE 468
H V KGAPE+IL L+ K E++ + G R L +
Sbjct: 474 DPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLY 533
Query: 469 VPDGR--------KESSGGPWQ---FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD 517
+PD + + P F+GL+ + DPPR + + + + G+ V M+TGD
Sbjct: 534 LPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 593
Query: 518 QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVA---LPVDELIEKADG---------- 564
AK + +G+ + G E I A +PV ++ +
Sbjct: 594 HPITAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645
Query: 565 ------------------FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG
Sbjct: 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 705
Query: 607 IAVADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665
+A+ A +D ++ A+D++L + + I++ V R IF +K Y ++ I + F+
Sbjct: 706 VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 765
Query: 666 LLALIWKFDFP-PFMVLIIAILNDGTIM 692
+ + + P P + I ++ GT M
Sbjct: 766 IFII---ANIPLPLGTITILCIDLGTDM 790
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 7e-40
Identities = 156/581 (26%), Positives = 246/581 (42%), Gaps = 92/581 (15%)
Query: 71 NPLSWVMEAAAIMAIAL---ANGGGKPPDWQDFVGIVTLLLI------NSTISFIEENNA 121
NP+ +V+E +I+ L + G + F +T++L N + E
Sbjct: 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGK 91
Query: 122 GNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180
A + +++LR DG A L GDI+ V+ G+IIP+D ++EG +
Sbjct: 92 AQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SV 150
Query: 181 DQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQ 236
D+SA+TGES PV + G SV G+ ++ + A TF + LV + Q
Sbjct: 151 DESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQ 210
Query: 237 QGHFQKVLTAIGNFCICSIAVGMIVEIIV--MYPIQHRKYRPGID--NLLVLLIGGIPIA 292
+ + LT I + +I + V +YP L+ LL+ IP
Sbjct: 211 KTPNEIALT------ILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTT 264
Query: 293 MPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKNLIE 351
+ +LS G R++ I A+E +D L DKTGT+TL N+ + +
Sbjct: 265 IGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF---- 320
Query: 352 IFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPK--EARANIQEVH--FLPFNPT 407
I GV + + A AS + ++ +IV LA E R + + H F+PF
Sbjct: 321 IPVPGVSEEELADAAQLAS-LADETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT-- 376
Query: 408 DKRTALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIERRVHAIIDKFAERGLRSLAVAY 466
+T ++ +D G + KGA + I VR I + A +D+ + G L V
Sbjct: 377 -AQTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVV-- 432
Query: 467 QEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIA 522
V +GR +G++ L D + E +G+ MITGD AIA
Sbjct: 433 --VENGR---------ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481
Query: 523 KETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQA 582
E G VD+ I +A PE K ++++ QA
Sbjct: 482 AEAG----------------------------VDDFIAEAT------PEDKLALIRQEQA 507
Query: 583 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 508 EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 2e-39
Identities = 159/698 (22%), Positives = 261/698 (37%), Gaps = 172/698 (24%)
Query: 138 VLRDGKWMEEDAAILVPGDIISVKL--GDIIPADARLLEGDPLKIDQSALTGESLPVTK- 194
V+R+GKW+ + LVPGDI+S+ +P D+ LL G + +++S LTGES+PV K
Sbjct: 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKF 291
Query: 195 -----GPGDSV------------YSG-------STCKQGEIEAVVIATGVHTFFGKAAH- 229
G D + G A+V+ TG T G+
Sbjct: 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRS 351
Query: 230 -----LVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVL 284
+ F+ +L F +G I II + + + +L ++
Sbjct: 352 ILYPKPRVFKFYKDSFKFIL-----FLAVLALIGFIYTIIELIKDGRPLGKIILRSLDII 406
Query: 285 LIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 344
I +P A+P LS+ + RL +G I +DV C DKTGTLT + L
Sbjct: 407 TIV-VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLD 465
Query: 345 V--------DKNLIEIF---AKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPK--- 390
+ ++ ++I + + +A S + ++ +VG D K
Sbjct: 466 LRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTK----LEGKLVGDPLDKKMFE 521
Query: 391 ------EARANIQE-------------------VHFLPFNPTDKRTA-LTYIDSEGKMHR 424
E E + F+ +R + + + E
Sbjct: 522 ATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDA 581
Query: 425 VSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVP--------DGRKES 476
KGAPE I +L + + ++ + G R LA+AY+E+P D +++
Sbjct: 582 FVKGAPETIQSLC-SPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640
Query: 477 SGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETG-----R 527
F+G + +P + D+ E I+ + MITGD +A+E G
Sbjct: 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSN 700
Query: 528 RLGMGTNMYPSSA------------------------LLGQNKDESIVALP--------- 554
L + P S LGQ+ E ++A
Sbjct: 701 TLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKA 760
Query: 555 -----------VDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603
+ L+ FA + P+ K +V+ LQ + GM GDG ND ALK+A
Sbjct: 761 FAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQA 820
Query: 604 DIGIAV--ADATDAARSASDIVLTEPGLSVII---SAVLTSRAIFQRMKNYT-IYAVSIT 657
D+GI++ A+A+ AA S + +VI A++TS +F+ M Y+ I S++
Sbjct: 821 DVGISLSEAEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVS 880
Query: 658 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTIS 695
I + LI + L DG +TI
Sbjct: 881 I--------------------LYLIGSNLGDGQFLTID 898
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 1e-33
Identities = 159/612 (25%), Positives = 240/612 (39%), Gaps = 152/612 (24%)
Query: 69 MW-NPLSWVMEAAAIM--AIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAA 125
NP+ +V+E +I+ + +A + F +TL L T+ F N A
Sbjct: 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLW-FTVLF------ANFA 82
Query: 126 AAL--------MASL-----APKSKVLRDGKWMEE-DAAILVPGDIISVKLGDIIPADAR 171
AL SL ++ LR+ EE A L GDI+ V+ G+IIPAD
Sbjct: 83 EALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGE 142
Query: 172 LLEGDPLKIDQSALTGESLPVTKGPGD---SVYSGSTCKQGEIEAVVIATGVHTFFGKAA 228
++EG +D+SA+TGES PV + G SV G+ I + A +F +
Sbjct: 143 VIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMI 201
Query: 229 HLVDSTNQQ--------GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRP-GID 279
LV+ +Q LT I ++ + + P I
Sbjct: 202 ALVEGAKRQKTPNEIALTILLAGLTII-----------FLLVVATLPPFAAYSGGALSIT 250
Query: 280 NLLVLLIGGIPIAMPTVLSVTMAIG---SHRLSLQGAITKRMTAIEEMAGMDVLCSDKTG 336
L+ LL+ IP + +LS AIG R+ I A+E +D L DKTG
Sbjct: 251 VLVALLVCLIPTTIGGLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTG 307
Query: 337 TLTL-NKLSVDKNLIEIF--AKGVDADAVVLMAARASRVENQDAIDAAIVGMLADP---- 389
T+TL N+ + + F GV ++ DAA + LAD
Sbjct: 308 TITLGNRQASE------FLPVPGVTE---------------EELADAAQLSSLADETPEG 346
Query: 390 -------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNL 436
+E F+PF+ +T ++ +D +G + KGA + I
Sbjct: 347 RSIVVLAKQRFNLRERDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRRY 401
Query: 437 VR-NKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495
V N + A +D+ A +G L VA D R +G++ L D +
Sbjct: 402 VESNGGHFPAELDAAVDEVARKGGTPLVVA----EDNR---------VLGVIYLKDIVKP 448
Query: 496 DSAETIRRALNLGVNVKMITGD-QL---AIAKETGRRLGMGTNMYPSSALLGQNKDESIV 551
E +G+ MITGD L AIA E G
Sbjct: 449 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG------------------------- 483
Query: 552 ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611
VD+ + +A PE K ++++ QA + MTGDG NDAPAL +AD+G+A+
Sbjct: 484 ---VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS 534
Query: 612 ATDAARSASDIV 623
T AA+ A ++V
Sbjct: 535 GTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 6e-33
Identities = 148/577 (25%), Positives = 241/577 (41%), Gaps = 81/577 (14%)
Query: 69 MWNPLSWVMEAAAIM----AIALANGGGKPPDWQDFVGIVTLLLINSTI--SFIEENNAG 122
NP+ +++ +++ IA A+ G + F I+T +L + + +F E G
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 123 NAAAALMASLAPKSKVL-----RDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP 177
A + K DG + A L GDI+ V+ GD+IP D ++EG
Sbjct: 90 RGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA 149
Query: 178 LKIDQSALTGESLPVTKGPGD---SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234
+D+SA+TGES PV K G SV G+ + A TF + LV+
Sbjct: 150 -SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA 208
Query: 235 NQQGHFQKV-LTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRP-GIDNLLVLLIGGIPIA 292
++ ++ LT + + ++ + ++ ++P + L+ LL+ IP
Sbjct: 209 QRRKTPNEIALTIL----LIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTT 264
Query: 293 MPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLSVDKNLIE 351
+ +LS G R+ I A+E +D L DKTGT+TL N+L+ +
Sbjct: 265 IGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF---- 320
Query: 352 IFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRT 411
I A+GVD + A AS + D + + +LA R + + F +T
Sbjct: 321 IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQT 378
Query: 412 ALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIERRVHAIIDKFAERGLRSLAVAYQEVP 470
++ I+ + + KGA + I V N I + +D+ A +G L V
Sbjct: 379 RMSGINLDNG-RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVV----CE 433
Query: 471 DGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETG 526
D R G++ L D + E + +G+ MITGD AIA E G
Sbjct: 434 DNR---------IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484
Query: 527 RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHI 586
VD+ I +A PE K ++++ QA +
Sbjct: 485 ----------------------------VDDFIAEAT------PEDKIALIRQEQAEGKL 510
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 511 VAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 7e-31
Identities = 142/528 (26%), Positives = 219/528 (41%), Gaps = 91/528 (17%)
Query: 127 ALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA + + LRDG+ E A L PGD+I V G +PAD +LL D+SALT
Sbjct: 236 ALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALT 294
Query: 187 GESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQ--------G 238
GES+PV + G+ V +G+T + V++ + + HL++ ++
Sbjct: 295 GESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFID 354
Query: 239 HFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLS 298
F ++ T + ++ V ++ ++ P Q YR L +LLI G P A+ V+S
Sbjct: 355 RFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VIS 405
Query: 299 VTMAIGS--HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF-AK 355
AI S + +GA+ K A+E++ + + DKTGTLT K V +I A
Sbjct: 406 TPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV----TDIHPAT 461
Query: 356 GVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTY 415
G+ ++ +AA A++ LA A ++ L + + AL
Sbjct: 462 GISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAG 509
Query: 416 IDSEGKM--HRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR 473
EG++ RV AP ++ + I++ G + V +
Sbjct: 510 SGIEGQVNGERVLICAPGKL-------PPLADAFAGQINELESAGKTVVLVLRND----- 557
Query: 474 KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533
+GL+ L D R D+ + I LG+ M+TGD A LG+
Sbjct: 558 --------DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI-- 607
Query: 534 NMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDG 593
D AG+ PE K + V L + M GDG
Sbjct: 608 -----------------------------DFRAGLLPEDKVKAVTELNQHAPL-AMVGDG 637
Query: 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641
+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 638 INDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 7e-31
Identities = 101/362 (27%), Positives = 158/362 (43%), Gaps = 64/362 (17%)
Query: 35 EGLSTEAAEERLTIFGYNKLEEKQESKILK-FLGFMWNPLSWVMEAAAIMAIALANGGGK 93
EGL+ + A+ RL G N+LE L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 94 PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILV 153
DW + I ++ +N I FI+E A +L +P + V+R+GK D+ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 154 PGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP------------GDSV- 200
PGDI +K GD IPAD RL+E D++ LTGESLPV K GD +
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 201 --YSGSTCKQGEIEAVVIATGVHTFFGKAA------------------------------ 228
+S S +G + + IAT +++ G A
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 229 ------HLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQ-HRKYRPGIDNL 281
N + L+ + C + +I IIVM + I
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAI-YA 313
Query: 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN 341
+ L I IP ++ VLS+TMA+G+ +S + I +++ A+E + ++ +CSDKTGT+T
Sbjct: 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQG 373
Query: 342 KL 343
K+
Sbjct: 374 KM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 3e-30
Identities = 131/564 (23%), Positives = 246/564 (43%), Gaps = 67/564 (11%)
Query: 100 FVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDII 158
+ ++TL+ N + + E A A K++ ++ DG + DA+ L G I+
Sbjct: 70 IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIV 129
Query: 159 SVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEAVV 215
V G+ IP D ++++G +D+SA+TGES PV K G D+V G++ +E +
Sbjct: 130 RVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEI 188
Query: 216 IATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFCIC-SIAVGMIVEIIVMYPI-QHRK 273
+ H+F K LV+ + +K I F + ++ + +V I+ MYP+ +
Sbjct: 189 TSEPGHSFLDKMIGLVEGATR----KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLN 244
Query: 274 YRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSD 333
+ I L+ L + IP + +LS G R++ + K ++E ++VL D
Sbjct: 245 FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILD 304
Query: 334 KTGTLTL-NKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEA 392
KTGT+T N+++ I + + + ++ AA S + + +IV LA +
Sbjct: 305 KTGTITYGNRMADA--FIPVKSSSFER---LVKAAYESSIADDTPEGRSIV-KLAYKQHI 358
Query: 393 RANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVHAII 451
+ ++PF + + + + E V KGAP ++ V+ I + A++
Sbjct: 359 DLPQEVGEYIPFTAETRMSGVKFTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALV 413
Query: 452 DKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNV 511
+++G L V +G++ L D + E R +G+
Sbjct: 414 KGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFRELREMGIET 460
Query: 512 KMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571
M TGD A + G VD + + PE
Sbjct: 461 VMCTGDNELTAATIAKEAG------------------------VDRFVAECK------PE 490
Query: 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631
K +++ QA+ HI MTGDG NDAPAL +A++G+A+ T +A+ A++++ + +
Sbjct: 491 DKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTK 550
Query: 632 IISAVLTSRAIFQRMKNYTIYAVS 655
++ VL + + + T ++++
Sbjct: 551 LMEVVLIGKQLLMTRGSLTTFSIA 574
|
Length = 673 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 4e-30
Identities = 116/443 (26%), Positives = 191/443 (43%), Gaps = 71/443 (16%)
Query: 350 IEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDK 409
I +FAK D L N++ + + K A + + PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSL---SQHNEKPGSAQFEFIAEFPFDSEIK 538
Query: 410 RTALTYIDSEGKMHRV-SKGAPEQIL---------NLVRNKSEIERRVHAII---DKFAE 456
R A Y D+ G+ + + +KGA E+I+ + V+ + II + A
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598
Query: 457 RGLRSLAVAYQEV---------------PDGRKESSGGPWQFIGLMPLFDPPRHDSAETI 501
GLR LA A + ES +F+GL+ ++DPPR++SA +
Sbjct: 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNESAGAV 655
Query: 502 RRALNLGVNVKMITGDQLAIAKETGRRLG-MGTNMYPSS-------ALLGQN----KDES 549
+ G+NV M+TGD AK + +G + N + G DE
Sbjct: 656 EKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE 715
Query: 550 IVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609
+ L L+ A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 716 VDDLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 610 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA----VSITIRIVLGF 664
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ V+ I +++G
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGL 830
Query: 665 MLLALIWKFDFP--PFMVL-IIAILNDGTIMTISKDRVKPS----PLPDS------WKL- 710
K FP P +L I I + M + ++ P D+ +L
Sbjct: 831 AFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELI 890
Query: 711 AEIFTTGVILGGY-LAMMTVIFF 732
++F G LGG LA T I +
Sbjct: 891 IDMFAYGFFLGGSCLASFTGILY 913
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 4e-26
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 11/249 (4%)
Query: 104 VTLLLINSTISFIEENNAGNAAAALMA--SLAPKSKVLRDGKWMEE-DAAILVPGDIISV 160
LLL+ S +EE +G A AL A LAP + + G +EE L GD++ V
Sbjct: 22 ALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVV 81
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGV 220
K G+ +P D +L G +D+SALTGES+PV K PGD V++G+ G + VV
Sbjct: 82 KPGERVPVDGVVLSGTST-VDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPA 140
Query: 221 HTFFGKAAHLV-DSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGID 279
+ K +LV ++ +++ Q+ + + + + +V ++ ++ +
Sbjct: 141 DSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVY 198
Query: 280 NLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGT 337
LVLL+ P A+ V+S A + G + K A+E +A + + DKTGT
Sbjct: 199 RALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGT 256
Query: 338 LTLNKLSVD 346
LT + V
Sbjct: 257 LTTGRPKVV 265
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 7e-22
Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 33/193 (17%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540
++G + L D PR D+AE I LG+ V M+TGD+ A+A+ R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
+DE+ A + PE K EIVK L+ + M GDG+NDAPAL
Sbjct: 402 --------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 601 KKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITI 658
AD+GIA+ A +D A +D+VL LS + A+ +R + +K N I I +
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILL 501
Query: 659 RIVLGFMLLALIW 671
I+L + +W
Sbjct: 502 LILLALFGVLPLW 514
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 8e-19
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 38/170 (22%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYP 537
+ L+ + DP R DS ++R G + M+TGD AIAKE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 538 SSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDA 597
+DE+I AGV P+ K E +KRLQ++ M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 598 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 2e-16
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 15 AVDLENVPMEEVFETLRCNKE-GLSTEAAEERLTIFGYNKLEE-KQESKILKFLGFMWNP 72
+D + +EEV E L+ + E GLS+E A RL +G N+L K+ S +L+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 73 LSWVMEAAAIMAIAL 87
L +++ AAA+++ L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 62.9 bits (154), Expect = 2e-12
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 20 NVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWVM 77
+ +EEV L + ++GL+ AEERL +G N+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 78 EAAAIMA 84
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 5e-09
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 154 PGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEA 213
PG ++ + GD +P D + +G+ +D++ LTGE +P KG GDSV++G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 214 VVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFC--ICSIAVGMIVEIIVM----- 266
A G HT + +V +Q K IG I ++ V ++V I ++
Sbjct: 402 RASAVGSHTTLSRIIRMV----RQAQSSK--PEIGQLADKISAVFVPVVVVIALVSAAIW 455
Query: 267 YPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSLQGAITKRMTAIE 322
Y P I LV+ + IA P L + M+I G R + G + + A++
Sbjct: 456 YFFGP---APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQ 512
Query: 323 EMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAA 367
+ +D L DKTGTLT K V ++ F +A A+ L AA
Sbjct: 513 RASTLDTLVFDKTGTLTEGKPQVVA--VKTFNGVDEAQALRLAAA 555
|
Length = 834 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 5e-08
Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 484 IGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 543
+GL+ L DP + E ++ G+ + ++TGD A R LG+ + +
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYG- 144
Query: 544 QNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603
V P ++ E A ++ L + M GDGVND PA K A
Sbjct: 145 ----LVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAA 186
Query: 604 D 604
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 4e-07
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASD 621
FAG PE K +I++ L+ R M G+G ND AL++AD+GI + +D
Sbjct: 74 FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTAD 133
Query: 622 IVLTEPGLSVIISA 635
+VL E + +
Sbjct: 134 VVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 7e-05
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 376 DAIDAAIVG----MLADPKEARANIQEVHFLPFNPTDKR-TALTYIDSEGKMHRVSKGAP 430
D ++A++ + D +E RA V +PFN KR + + ++ + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 431 EQILNL 436
E+IL
Sbjct: 82 ERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.004
Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 38/166 (22%)
Query: 400 HFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAI-IDKFAERG 458
+ L FN KR ++ + +G++ + KGA I + + ++ +A G
Sbjct: 513 NVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEG 572
Query: 459 LRSLAVAYQEVPDGRKESSGGPWQ-----------------------------FIGLMPL 489
LR+L +AY+E+ + E W +G +
Sbjct: 573 LRTLCIAYRELSEEEYEE----WNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAI 628
Query: 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM 535
D + ETI G+ + ++TGD++ ET +G +
Sbjct: 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKV----ETAINIGYSCRL 670
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.62 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.4 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.33 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.09 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.07 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.98 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.86 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.85 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.69 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.67 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.67 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.66 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.65 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.6 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.58 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.56 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.51 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.48 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.46 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.43 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.41 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.39 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.34 | |
| PLN02887 | 580 | hydrolase family protein | 98.34 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.32 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.3 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.29 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.27 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.24 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.24 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.15 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.14 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.07 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.07 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.04 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.04 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.99 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.91 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.88 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.68 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.65 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.64 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.39 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.33 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.32 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.31 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.22 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.09 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.05 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.02 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.95 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.94 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 96.89 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.89 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.82 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.77 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.75 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.67 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.59 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.57 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.46 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.42 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.34 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.34 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.32 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.25 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.11 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.09 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.08 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.05 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.99 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.92 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.88 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.82 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.74 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.67 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.63 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.62 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.58 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.31 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.29 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.28 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.25 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.18 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.03 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.92 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.69 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.41 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 94.29 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.24 | |
| PLN02940 | 382 | riboflavin kinase | 94.19 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.12 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.09 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.99 | |
| PLN02580 | 384 | trehalose-phosphatase | 93.94 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 93.77 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.77 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 93.63 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.09 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 92.82 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.78 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.68 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.68 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.37 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 91.95 | |
| PLN02811 | 220 | hydrolase | 91.76 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.46 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.11 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 90.65 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 90.63 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 90.15 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.75 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 89.53 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.33 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 88.96 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 88.09 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 87.9 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 87.6 | |
| PLN03017 | 366 | trehalose-phosphatase | 87.03 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 86.78 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 85.62 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 84.47 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 84.12 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 82.69 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 81.76 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 81.13 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-202 Score=1654.77 Aligned_cols=942 Identities=84% Similarity=1.276 Sum_probs=923.9
Q ss_pred CCcccccHHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHH
Q 002172 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAA 80 (956)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~a 80 (956)
|.++-.+++..++|.+|.+..|.+||+++|.|+++|||++|+++|+++||+|+++++|++.+++|+.+||||++|+|++|
T Consensus 1 m~e~l~s~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaA 80 (942)
T KOG0205|consen 1 MIEELDSLEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAA 80 (942)
T ss_pred CcccccchhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHH
Confidence 44444458999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEE
Q 002172 81 AIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISV 160 (956)
Q Consensus 81 ails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l 160 (956)
|++++.+.+++|+|+||.||++|++++++|+.++|+||++|+++.++||+.++++++|+|||+|.++++++||||||+.+
T Consensus 81 AimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsi 160 (942)
T KOG0205|consen 81 AIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSI 160 (942)
T ss_pred HHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcccccchH
Q 002172 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240 (956)
Q Consensus 161 ~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l 240 (956)
+.||+||||+||++|+.|+||+|+|||||.||.|++||.+||||+|++|++.++|++||.+|++||.+++++++.+.+||
T Consensus 161 k~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHF 240 (942)
T KOG0205|consen 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240 (942)
T ss_pred ccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccch
Q 002172 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTA 320 (956)
Q Consensus 241 ~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~ 320 (956)
|++++.|+++|++++++++++.+.++|+.+.+.++..+.++++++++.+|.+||+++++++++|++||+++|+++|++++
T Consensus 241 qkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtA 320 (942)
T KOG0205|consen 241 QKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (942)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeE
Q 002172 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVH 400 (956)
Q Consensus 321 lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~ 400 (956)
+|+|+.+|++|+|||||||.|+++|++..++.+.++.++|++++.|+.+++.+++|++|.|++++++||++.+.+|++++
T Consensus 321 IEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevh 400 (942)
T KOG0205|consen 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVH 400 (942)
T ss_pred HHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEe
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCC
Q 002172 401 FLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480 (956)
Q Consensus 401 ~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~ 480 (956)
+.||||.+||.+.+|.+++|++++++|||||.|+++|+.+.++++++++.+++|+++|+|.|++|++..+++.++..+.+
T Consensus 401 F~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~p 480 (942)
T KOG0205|consen 401 FLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGP 480 (942)
T ss_pred eccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhh
Q 002172 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560 (956)
Q Consensus 481 l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 560 (956)
|+|+|+..+.||||+|+.++|++....|++|+|+|||...++++++|++|+.+|+|++..+.|.+.++.+...+.+++++
T Consensus 481 w~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie 560 (942)
T KOG0205|consen 481 WEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIE 560 (942)
T ss_pred cccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHH
Q 002172 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (956)
Q Consensus 561 ~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR 640 (956)
+++.||.+.||||+++|+.||++||+|+|+|||+||+||||+||+|||+.++||+|+.+|||||+++++|.|+.++..+|
T Consensus 561 ~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSr 640 (942)
T KOG0205|consen 561 KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (942)
T ss_pred hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHhhcccccccccCCCCCCCCCCccchHHHHHHHHHH
Q 002172 641 AIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720 (956)
Q Consensus 641 ~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p~~~l~i~~~~d~~~~~l~~d~~~p~~~p~~~~~~~~~~~~~~~ 720 (956)
.+|+||++|.+|+++.++.+++++++..++|.|.|+|+++++++++||++.|++++|+++|+|.|++|+++++|..++++
T Consensus 641 aIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVl 720 (942)
T KOG0205|consen 641 AIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVL 720 (942)
T ss_pred HHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHH
Q 002172 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFA 800 (956)
Q Consensus 721 G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~ 800 (956)
|.|++++++.+||..+.+.||+..||++...++.. +..+.+|+++++.+|+++|++|+++|+|.++|+++++.+++
T Consensus 721 gtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~----~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~ 796 (942)
T KOG0205|consen 721 GTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEH----ELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFF 796 (942)
T ss_pred hhHHHHHHHHHhhhhccccccccccceeeccCCHH----HHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHH
Confidence 99999999999999999999999999998888877 78889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHhhhhhhcccccCChhHHH
Q 002172 801 VAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERE 880 (956)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (956)
.++++++++++|++|.|....+++|.|..++|+++++.++|.++.||..||.++|++|.+.+++|++++.|+++++++++
T Consensus 797 ~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~ 876 (942)
T KOG0205|consen 797 AAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEERE 876 (942)
T ss_pred HHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccCCCCccccccccchhhhhHHhHHHHhhhhHHhhhhhhcccchhhhhhhhcCCChhhhcccccC
Q 002172 881 LKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956 (956)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (956)
++||.+||++||+++++ .+|+++++||+|||+|++||||+||+|||+||++|+||+|+|++ |||||
T Consensus 877 a~~~~~qrt~~~lq~~~---------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 877 AQWALAQRTLHGLQPPE---------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred hHHHHhhhhhcccCCCc---------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 99999999999999994 27999999999999999999999999999999999999999999 99997
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-143 Score=1227.88 Aligned_cols=829 Identities=28% Similarity=0.410 Sum_probs=670.3
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC
Q 002172 16 VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGK 93 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~ 93 (956)
.+.|..+.+|+++.|.++ ++|||++|+.+|+++||+|+++... ++.|.++++||.||+..+|+++|++|+++.
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~----- 76 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA----- 76 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-----
Confidence 356789999999999999 5699999999999999999998554 888999999999999999999999999995
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEe
Q 002172 94 PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLL 173 (956)
Q Consensus 94 ~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll 173 (956)
.|.+.+.|.+++++|++++++||||+++++++|+++.|+.|+|+|+|+.+.+++++|||||||.++-||+||||.||+
T Consensus 77 --~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~ 154 (972)
T KOG0202|consen 77 --DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLI 154 (972)
T ss_pred --hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEE
Confidence 788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCceeeccccCCcCeeeecCC--------------CCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccc
Q 002172 174 EGDPLKIDQSALTGESLPVTKGP--------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQG 238 (956)
Q Consensus 174 ~g~~l~VDeS~LTGES~pv~K~~--------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~ 238 (956)
+..++.||||.|||||.||.|.. .|++|+||.|..|+++|+|+.||.+|++|++.+.++++ +.++
T Consensus 155 e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kT 234 (972)
T KOG0202|consen 155 EAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKT 234 (972)
T ss_pred eeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCC
Confidence 99999999999999999999953 25799999999999999999999999999999999887 5699
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHH-hHhhc---c-c---cCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHH
Q 002172 239 HFQKVLTAIGNFCICSIA-VGMIVEII-VMYPI---Q-H---RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (956)
Q Consensus 239 ~l~~~~~~i~~~~~~~i~-i~~~~~~~-~~~~~---~-~---~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~ 309 (956)
|+|+.++.++..+.-.+. +++.+..+ +.|+. . + ..+...+..++++.+++||++||+++++++++|.+||+
T Consensus 235 PLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMa 314 (972)
T KOG0202|consen 235 PLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMA 314 (972)
T ss_pred cHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHH
Confidence 999999999887542222 22222112 11111 1 2 33445566778999999999999999999999999999
Q ss_pred hCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeec-----------cCCC------------------CHH
Q 002172 310 LQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF-----------AKGV------------------DAD 360 (956)
Q Consensus 310 ~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-----------~~~~------------------~~~ 360 (956)
|++++||+++++|+||.+++||+|||||||+|+|++.+.++... ..++ +.+
T Consensus 315 kknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~ 394 (972)
T KOG0202|consen 315 KKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDND 394 (972)
T ss_pred hhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccH
Confidence 99999999999999999999999999999999999998764211 0011 111
Q ss_pred ---HHHHHHHHhccc------c-----ccChHHHHHHHhcC-----ChH---H-----------HhhccceeEeecCCCC
Q 002172 361 ---AVVLMAARASRV------E-----NQDAIDAAIVGMLA-----DPK---E-----------ARANIQEVHFLPFNPT 407 (956)
Q Consensus 361 ---~~l~~aa~~~~~------~-----~~~~i~~ai~~~~~-----~~~---~-----------~~~~~~~l~~~pF~s~ 407 (956)
+++..++.|+.. . .+.|.|.|+...+. +.. . ....++...++||+++
T Consensus 395 ~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd 474 (972)
T KOG0202|consen 395 LLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD 474 (972)
T ss_pred HHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence 234444554421 1 34677888765431 111 0 1122345589999999
Q ss_pred CcceEEEEEcCCCc--EEEEEeCcHHHHHHhhcC------------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCC-C
Q 002172 408 DKRTALTYIDSEGK--MHRVSKGAPEQILNLVRN------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPD-G 472 (956)
Q Consensus 408 ~kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~-~ 472 (956)
+|+|++.+.+..|+ ...|+|||+|.|+++|+. .+..++.+.+...+|+++|+||||+|+++.+. .
T Consensus 475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~ 554 (972)
T KOG0202|consen 475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV 554 (972)
T ss_pred cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence 99999999876664 678999999999999953 23567889999999999999999999997763 1
Q ss_pred ----------CccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCcc
Q 002172 473 ----------RKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSA 540 (956)
Q Consensus 473 ----------~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~ 540 (956)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||.+|||++|+..+.. ...+
T Consensus 555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~ 634 (972)
T KOG0202|consen 555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA 634 (972)
T ss_pred hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence 1345789999999999999999999999999999999999999999999999999999975433 4578
Q ss_pred ccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhc
Q 002172 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSA 619 (956)
Q Consensus 541 l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~a 619 (956)
++|++.|. ++++++++...+..+|||++|.||.+||++||++|++|||||||+||+||||.|||||||| +|||+||+|
T Consensus 635 ~TG~efD~-ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeA 713 (972)
T KOG0202|consen 635 LTGSEFDD-LSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEA 713 (972)
T ss_pred cchhhhhc-CCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhh
Confidence 99999985 8888999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCChHHHHHHHHhhccc-ccccccC
Q 002172 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-LALIWKFDFPPFMVLIIAILNDGT-IMTISKD 697 (956)
Q Consensus 620 ADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~-~~~~~~~~~~p~~~l~i~~~~d~~-~~~l~~d 697 (956)
||+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+..+++ ..+..++|+.|+|+||+|+++|++ +++++++
T Consensus 714 sDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~e 793 (972)
T KOG0202|consen 714 SDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFE 793 (972)
T ss_pred hhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCC
Confidence 99999999999999999999999999999999999999998776655 456678999999999999999998 5899988
Q ss_pred CC------CCCCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cCC----cccCcc--cCCCCchhhHH-HH
Q 002172 698 RV------KPSPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTD--FFP----RTFGVS--SLHEKDIDDWK-KL 761 (956)
Q Consensus 698 ~~------~p~~~p~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~--~~~----~~~~~~--~~~~~~~~~~~-~~ 761 (956)
++ +||+.++ ......++..++.+|.|+.+.++..|++.+... -.+ .+|+.. ...+++-..+. ..
T Consensus 794 p~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~ 873 (972)
T KOG0202|consen 794 PVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMC 873 (972)
T ss_pred CCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccc
Confidence 76 3343333 333456788889999999999887665544311 000 000000 00000000000 00
Q ss_pred HHHHHHHHHHHH-HHHHHHHhcCCCccccCh---hHHHHHHHHHHHHHHHHHHHhcc--ccccccCchhHHHHHHHHHHH
Q 002172 762 ASAIYLQVSTIS-QALIFVTRARSWSFVDRP---GLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGVGWGWAGVVWLYN 835 (956)
Q Consensus 762 ~~~~~~~~~i~~-~~~i~~~rs~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 835 (956)
..++.+++.++. .++.+++|+...+.+..| |.||++++.++++. .++.+|.+ -..++..+.+|.-|++++.++
T Consensus 874 ~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~-~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s 952 (972)
T KOG0202|consen 874 PLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVL-HFLVLYVPPLQRIFQTEPLSLAEWLLVLAIS 952 (972)
T ss_pred cceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHh-hheEEEechhhhhheecCCcHHHHHHHHHHh
Confidence 112223333333 335578888877766543 66888887766544 44556654 123456677776667788899
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 002172 836 LIFYIPLDFIKFFIRYAL 853 (956)
Q Consensus 836 ~~~~~~~~~~K~~~r~~~ 853 (956)
..+++++|++|++.|+++
T Consensus 953 ~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 953 SPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhHHHHHHHHHHhcc
Confidence 999999999999999875
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-134 Score=1235.63 Aligned_cols=751 Identities=61% Similarity=0.943 Sum_probs=660.8
Q ss_pred CCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHH
Q 002172 36 GLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISF 115 (956)
Q Consensus 36 GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~ 115 (956)
|||++||++|+++||+|++++++++.|..|+++|++|++|+|++++++++++ ++|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------~~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------ENWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------cchhhhhhhhhhhHHHHHHHH
Confidence 9999999999999999999988788899999999999999999999999998 389999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecC
Q 002172 116 IEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195 (956)
Q Consensus 116 ~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~ 195 (956)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||+|++|+++.||||+|||||.||.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999997899999999999999999
Q ss_pred CCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCc
Q 002172 196 PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKY 274 (956)
Q Consensus 196 ~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~ 274 (956)
+||.+|+||.|.+|+++++|++||.+|++||+++++++. .+++|+|+.+++++.+++..+++.+++.+++.+...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999999999999999999999999999887 4678999999999988655443333333333332245677
Q ss_pred cchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeecc
Q 002172 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA 354 (956)
Q Consensus 275 ~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~ 354 (956)
...+..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+ ...
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~--~~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL--PFF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE--ecC
Confidence 888899999999999999999999999999999999999999999999999999999999999999999998865 222
Q ss_pred CCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEEEcC-CCcEEEEEeCcHHHH
Q 002172 355 KGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQI 433 (956)
Q Consensus 355 ~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~i 433 (956)
.+.++++++.+++.+++..++||+|.|++.++.+....+..++.++++||++.+|+|++.+.+. +|+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 2366778888888777666779999999988765544456688899999999999999988765 377888999999999
Q ss_pred HHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEE
Q 002172 434 LNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKM 513 (956)
Q Consensus 434 l~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~m 513 (956)
+++|++..+.++++++.+++++++|+|++++||++ .|++|+|+|+++|+||||||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998777777888899999999999999999983 2678999999999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHhCCCCCCCCCccc-cCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcC
Q 002172 514 ITGDQLAIAKETGRRLGMGTNMYPSSAL-LGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (956)
Q Consensus 514 iTGD~~~tA~~ia~~lGi~~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GD 592 (956)
+||||+.||.++|+++||..+.+....+ .|.+. +.+++.++++.++++++|||++||||+++|+.||++||+|+||||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 9999999999999999997543322222 23222 246677899999999999999999999999999999999999999
Q ss_pred CccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 002172 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK 672 (956)
Q Consensus 593 GvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~ 672 (956)
|+||+||||+|||||||++|+|+||++||+||++|||++|+.++++||++|+||+||+.|.++.|+..++.+++..++++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887777766678
Q ss_pred cCCChHHHHHHHHhhcccccccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCC
Q 002172 673 FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHE 752 (956)
Q Consensus 673 ~~~~p~~~l~i~~~~d~~~~~l~~d~~~p~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 752 (956)
++++|+|++|+|+++|++.+++++|+++|+++|++|....++..++++|+++++.++++||+.+...++...++. ..
T Consensus 623 ~~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 699 (755)
T TIGR01647 623 FYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QL 699 (755)
T ss_pred cchhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---cc
Confidence 889999999999999998999999999999999999999999999999999999999888777642221111111 00
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHHHHHHHHHH
Q 002172 753 KDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAV 811 (956)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 811 (956)
. +.+.++.+|+...+..++.+|++|+++.+|.++|++++++++++.+++.++++.
T Consensus 700 ~----~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 700 L----HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred c----HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 1 114555555555555555789999999999999999999999988888777654
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-133 Score=1237.72 Aligned_cols=808 Identities=27% Similarity=0.427 Sum_probs=670.2
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC
Q 002172 16 VDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~~-~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~ 94 (956)
...+..+.+++++.|+++.+|||++||++|+++||+|+++.+++ +.|..|+++|++|++++|++++++++++
T Consensus 47 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~------- 119 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------- 119 (902)
T ss_pred HHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH-------
Confidence 45678899999999999999999999999999999999998775 5778899999999999999999999987
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEC------CeEEEEeccCcCCCcEEEEeCCCeeec
Q 002172 95 PDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD------GKWMEEDAAILVPGDIISVKLGDIIPA 168 (956)
Q Consensus 95 ~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd------G~~~~I~~~~LvpGDiV~l~~Gd~VPa 168 (956)
++|.++++|++++++|..++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+|||
T Consensus 120 ~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 120 EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 48999999999999999999999999999999999999999999999 789999999999999999999999999
Q ss_pred ceEEeecCCceeeccccCCcCeeeecCCCC-------------ccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-
Q 002172 169 DARLLEGDPLKIDQSALTGESLPVTKGPGD-------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (956)
Q Consensus 169 D~~ll~g~~l~VDeS~LTGES~pv~K~~g~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (956)
||+|++|+++.||||+|||||.||.|.+++ ++|+||.|.+|+++++|++||.+|++||+++++++.
T Consensus 200 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~ 279 (902)
T PRK10517 200 DLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279 (902)
T ss_pred eEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccC
Confidence 999999998899999999999999998874 799999999999999999999999999999999876
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCc
Q 002172 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (956)
Q Consensus 235 ~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~il 314 (956)
.+++|+|+.+++++++++...++.+.+.++ .+.....+|.+.+..++++++++|||+||++++++++.|+++|+|+|++
T Consensus 280 ~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~il 358 (902)
T PRK10517 280 SEPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVI 358 (902)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcE
Confidence 678999999999987754433322222222 2222345677888889999999999999999999999999999999999
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcccc--ccChHHHHHHHhcCCh--H
Q 002172 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVE--NQDAIDAAIVGMLADP--K 390 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~--~~~~i~~ai~~~~~~~--~ 390 (956)
+|+++++|+||++|+||||||||||+|+|+|.+.. . ..+.+.++++..++.++... ..||+|.|++.++... .
T Consensus 359 Vk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~ 435 (902)
T PRK10517 359 VKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESAR 435 (902)
T ss_pred EecchhhhhccCCCEEEecCCCccccceEEEEEEe-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999998742 1 12445567777777655432 4689999998876432 2
Q ss_pred HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC----------chHHHHHHHHHHHHHHHcCCe
Q 002172 391 EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKFAERGLR 460 (956)
Q Consensus 391 ~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~G~R 460 (956)
.....++.++++||||++|+|++++.+.++....++||+||.++++|+. +++.++++.+..++++++|+|
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~r 515 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLR 515 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCE
Confidence 2345678899999999999999988766777788999999999999964 124456778888999999999
Q ss_pred EEEEEEeecCCCCc---cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC
Q 002172 461 SLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537 (956)
Q Consensus 461 vlavA~~~l~~~~~---~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~ 537 (956)
|+++||++++..+. ...|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||..
T Consensus 516 vlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---- 591 (902)
T PRK10517 516 VVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA---- 591 (902)
T ss_pred EEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----
Confidence 99999998764322 12477999999999999999999999999999999999999999999999999999952
Q ss_pred CccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHh
Q 002172 538 SSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (956)
Q Consensus 538 ~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak 617 (956)
..+++|.+.+. ++++++++.+++++||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|||+||
T Consensus 592 ~~v~~G~el~~-l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAk 670 (902)
T PRK10517 592 GEVLIGSDIET-LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670 (902)
T ss_pred cCceeHHHHHh-CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHH
Confidence 35788888774 78889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCChHHHHHHHHhhccccccccc
Q 002172 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVLIIAILNDGTIMTISK 696 (956)
Q Consensus 618 ~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~-~~~~p~~~l~i~~~~d~~~~~l~~ 696 (956)
++||+||+||||++|+.+|++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+.+++++
T Consensus 671 eaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~ 750 (902)
T PRK10517 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPF 750 (902)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcC
Confidence 9999999999999999999999999999999999999999999888877666666 699999999999999987899999
Q ss_pred CCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHH
Q 002172 697 DRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQ 774 (956)
Q Consensus 697 d~~~p~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 774 (956)
|++.|.. +|.+|+...+....++.|++.++++++.|++++.. ++.. ..... ..+.+. +|...+++|
T Consensus 751 d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~---~~~~~--~~~~~~-~F~~~~~~q 818 (902)
T PRK10517 751 DNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHAN---TPETQ--TLFQSG-WFVVGLLSQ 818 (902)
T ss_pred CCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccc---chhhH--hHHHHH-HHHHHHHHH
Confidence 9987763 67778888888888899999888887777665421 1110 00000 012223 355666666
Q ss_pred H-HHHHHhcCCCccccC-hhHHHHHHHHHHHHHHHHHHHhccccccccCchh--HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 775 A-LIFVTRARSWSFVDR-PGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WGWAGVVWLYNLIFYIPLDFIKFFIR 850 (956)
Q Consensus 775 ~-~i~~~rs~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~r 850 (956)
. .+|++|+++.+++.+ |.+..++..++.+++.+++++..--+++.+.+++ +..|+++++++.. +..++.|....
T Consensus 819 ~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 819 TLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred HHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 5 679999987555444 4444444444444444444411111234455555 3344444444433 55778776644
Q ss_pred Hhc
Q 002172 851 YAL 853 (956)
Q Consensus 851 ~~~ 853 (956)
+.+
T Consensus 897 ~~~ 899 (902)
T PRK10517 897 RRY 899 (902)
T ss_pred Hhh
Confidence 444
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-132 Score=1234.17 Aligned_cols=815 Identities=26% Similarity=0.416 Sum_probs=670.5
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----
Q 002172 16 VDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANG---- 90 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~---- 90 (956)
...|+.+.+|+++.|+++.+|||++||++|+++||+|++++++ .+.|+.|+++|++|+.|+|+++++++++++..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4578899999999999999999999999999999999999776 56788999999999999999999999998532
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEC------CeEEEEeccCcCCCcEEEEeCCC
Q 002172 91 GGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD------GKWMEEDAAILVPGDIISVKLGD 164 (956)
Q Consensus 91 ~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd------G~~~~I~~~~LvpGDiV~l~~Gd 164 (956)
.+...+|.++++|++++++|+.++++||++++++.++|+++.+++++|+|| |++++|+++||||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 123358999999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred eeecceEEeecCCceeeccccCCcCeeeecCC-----------------------CCccccCCeeccCcEEEEEEEecch
Q 002172 165 IIPADARLLEGDPLKIDQSALTGESLPVTKGP-----------------------GDSVYSGSTCKQGEIEAVVIATGVH 221 (956)
Q Consensus 165 ~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~-----------------------g~~v~~Gs~v~~G~~~~~V~~tG~~ 221 (956)
+|||||+|++|+++.||||+|||||.||.|.+ +|++|+||.|.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999988999999999999999975 3689999999999999999999999
Q ss_pred hHHHhHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHH
Q 002172 222 TFFGKAAHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301 (956)
Q Consensus 222 T~~gki~~l~~~~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~ 301 (956)
|++||+++++.+...++++|+.++++++++..+..+++.+.++ .......+|.+.+..++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~-~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLL-INGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 9999999999876667899999998877643322222221111 112234567778888999999999999999999999
Q ss_pred HHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccc--cccChHH
Q 002172 302 AIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV--ENQDAID 379 (956)
Q Consensus 302 ~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~--~~~~~i~ 379 (956)
+.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+ . ..+.+.++++.+++.++.. ..+||+|
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~--~-~~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL--D-VSGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE--c-CCCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 999999999999999999999999999999999999999999998754 1 1234456677766654332 2468999
Q ss_pred HHHHHhcCCh--HHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC----------chHHHHHH
Q 002172 380 AAIVGMLADP--KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRV 447 (956)
Q Consensus 380 ~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~ 447 (956)
.|++.++... ......++.++++||++.+|+|++++.+.+|+.+.++|||||.++++|+. +++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 9999876432 12234678899999999999999998876788889999999999999963 22346677
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCC-----ccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHH
Q 002172 448 HAIIDKFAERGLRSLAVAYQEVPDGR-----KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (956)
Q Consensus 448 ~~~i~~~a~~G~RvlavA~~~l~~~~-----~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA 522 (956)
.+.+++++++|+|++++||++++.++ .+..|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 88889999999999999999876532 1235789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhcc
Q 002172 523 KETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602 (956)
Q Consensus 523 ~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~ 602 (956)
.+||+++||.. ..+++|.+++. +++.++.+.+++++||||++|+||+++|+.||++|++|+|||||+||+||||+
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999953 35788888874 78889999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCChHHHH
Q 002172 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVL 681 (956)
Q Consensus 603 AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~-~~~~p~~~l 681 (956)
||||||||+|||+||++||+||+||||++|+.++++||++|+||+||+.|.++.|+..++.+++..++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998877666555555 689999999
Q ss_pred HHHHhhcccccccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHH
Q 002172 682 IIAILNDGTIMTISKDRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWK 759 (956)
Q Consensus 682 ~i~~~~d~~~~~l~~d~~~p~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (956)
|+|+++|++.+++++|++.+.. +|.+|+.+.+-...+.+|.+.++++++.|++.+.. +. .+ ... ..
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~-----~~~---~~ 803 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--AN-----SVE---MQ 803 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cC-----cHh---hh
Confidence 9999999888999999886553 56666655444455567877777776666553321 00 01 000 00
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHhcCCCccccChh-HHHHHHHHHHHHHHHHHHH--hccccccccCchhHHHHHHHHHHH
Q 002172 760 KLASAIYLQVSTISQA-LIFVTRARSWSFVDRPG-LLLVLAFAVAQLIATLIAV--YANWSFAAIEGVGWGWAGVVWLYN 835 (956)
Q Consensus 760 ~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 835 (956)
....+.+|...+++|. .+|++|+++.+++.++. +..+++.++.+++.+++++ .. .++.+.++++..|++++.++
T Consensus 804 ~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~f~~~~l~~~~~~~~~~~~ 881 (903)
T PRK15122 804 ALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLG--AMVGLEPLPWSYFPWLAATL 881 (903)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHH--HHhCCCCCCHHHHHHHHHHH
Confidence 1122334555566665 68999998755555543 3333344444444444443 22 23456677777777777888
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 002172 836 LIFYIPLDFIKFFIRYAL 853 (956)
Q Consensus 836 ~~~~~~~~~~K~~~r~~~ 853 (956)
+++++..++.|.+.++.+
T Consensus 882 ~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 882 LGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HHHHHHHHHHHHHHhhhc
Confidence 888888888886544443
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-132 Score=1246.28 Aligned_cols=824 Identities=26% Similarity=0.369 Sum_probs=661.5
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Q 002172 14 EAVDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (956)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~ 91 (956)
|--|||..+.+|++++|+++ .+|||++||++|+++||+|++++++ .+.|..|++||++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 45689999999999999998 4799999999999999999999876 678889999999999999999999999983
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceE
Q 002172 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (956)
Q Consensus 92 ~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ 171 (956)
+|.++++|++++++|+.++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+||||||
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCceeeccccCCcCeeeecCCC---------------CccccCCeeccCcEEEEEEEecchhHHHhHHHhhhccc-
Q 002172 172 LLEGDPLKIDQSALTGESLPVTKGPG---------------DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 235 (956)
Q Consensus 172 ll~g~~l~VDeS~LTGES~pv~K~~g---------------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~- 235 (956)
|+++++|.||||+|||||.||.|.+. |++|+||.|.+|+++++|++||.+|++|||++++++..
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99999999999999999999999642 57899999999999999999999999999999886431
Q ss_pred -----------------------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHH
Q 002172 236 -----------------------------------QQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDN 280 (956)
Q Consensus 236 -----------------------------------~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 280 (956)
.++|+|+.+++++.++.++.++.+++.+++.+ . ..+...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHH
Confidence 13899999999988754333222222121111 1 112355667
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee---c---c
Q 002172 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI---F---A 354 (956)
Q Consensus 281 ~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~---~---~ 354 (956)
.++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+.++.. + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 789999999999999999999999999999999999999999999999999999999999999999875421 0 0
Q ss_pred --CCC---------------------------------------C---------HHHHHHHHHHhccc------------
Q 002172 355 --KGV---------------------------------------D---------ADAVVLMAARASRV------------ 372 (956)
Q Consensus 355 --~~~---------------------------------------~---------~~~~l~~aa~~~~~------------ 372 (956)
.++ + ...++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 01245556666421
Q ss_pred cccChHHHHHHHhcCCh----------HHH-------------------hhccceeEeecCCCCCcceEEEEEcCCC-cE
Q 002172 373 ENQDAIDAAIVGMLADP----------KEA-------------------RANIQEVHFLPFNPTDKRTALTYIDSEG-KM 422 (956)
Q Consensus 373 ~~~~~i~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~ 422 (956)
..+||.|.|++.++... .+. +..++.++.+||||++|||++++++.+| ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12589999998764211 111 1246789999999999999999986545 46
Q ss_pred EEEEeCcHHHHHHhhcC------------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC------------ccCCC
Q 002172 423 HRVSKGAPEQILNLVRN------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR------------KESSG 478 (956)
Q Consensus 423 ~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~------------~~~~e 478 (956)
+.++|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||.++.++ .+..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 78999999999999963 1245677888999999999999999999886432 23457
Q ss_pred CCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--------CCccccCCcccccc
Q 002172 479 GPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--------PSSALLGQNKDESI 550 (956)
Q Consensus 479 ~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--------~~~~l~g~~~~~~~ 550 (956)
++|+|+|+++++||||+|++++|++|+++||+|+|+||||+.||.++|+++||..+.. ...+++|.+.+. +
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-L 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh-c
Confidence 8999999999999999999999999999999999999999999999999999964311 235778877764 6
Q ss_pred CcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCCh
Q 002172 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 629 (956)
Q Consensus 551 ~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~ 629 (956)
++.++++++++..||||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||+||++|||
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 777888999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hcCCChHHHHHHHHhhccc-ccccccCCCC--
Q 002172 630 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIW------KFDFPPFMVLIIAILNDGT-IMTISKDRVK-- 700 (956)
Q Consensus 630 ~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~------~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~-- 700 (956)
++|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++|++|+|++|+|+++|++ .+++++|++.
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999999888777665542 3688899999999999975 6889888753
Q ss_pred ----CCCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcc---cCCCCchhhHHHHHHHHHHHHHHH
Q 002172 701 ----PSPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVS---SLHEKDIDDWKKLASAIYLQVSTI 772 (956)
Q Consensus 701 ----p~~~p~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~ 772 (956)
||+.++ +...+.++..++++|+++++.+++.|++.++. +.....+.. ....... .+ ...++++|...++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAGCN-DV-FKARSAAFATMTF 948 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccccc-ch-hhhHHHHHHHHHH
Confidence 333332 33344566678889999999888777654321 100000000 0000000 01 2234455556666
Q ss_pred HHH-HHHHHhcCCCccccC------------------hhHHHHHHHHHHHHHHHHHHHhcc-c--cccccCchhHHHHHH
Q 002172 773 SQA-LIFVTRARSWSFVDR------------------PGLLLVLAFAVAQLIATLIAVYAN-W--SFAAIEGVGWGWAGV 830 (956)
Q Consensus 773 ~~~-~i~~~rs~~~~~~~~------------------~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 830 (956)
+|. ++|++|+.+.+++.. .|.+++++++++.++. ++.+|.+ . .++.+.+++|.|+ .
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~~~~~p~~~~~~f~~~~l~~~w~-~ 1026 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSA-FPTIYIPVINDDVFKHKPIGAEWG-L 1026 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHH-HHHHhhhhhhhhhhccCCcchHHH-H
Confidence 665 678999865543321 3455655555444333 2333433 2 2556677778654 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 002172 831 VWLYNLIFYIPLDFIKFFIRYAL 853 (956)
Q Consensus 831 ~~~~~~~~~~~~~~~K~~~r~~~ 853 (956)
+++++++.++..|++|++.|++.
T Consensus 1027 ~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1027 AAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 77788888899999999877654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-133 Score=1240.72 Aligned_cols=777 Identities=32% Similarity=0.503 Sum_probs=652.7
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 002172 14 EAVDLENVPME--EVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALAN 89 (956)
Q Consensus 14 ~~~~~~~~~~~--~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~ 89 (956)
+...||..+.+ ++...+.++ .+|||++|+.+|+++||+|++++.+ .+.|.+|+.+|++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34578888888 999999887 5699999999999999999999655 688999999999999999999999999984
Q ss_pred CCCCCCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCe
Q 002172 90 GGGKPPDW----QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDI 165 (956)
Q Consensus 90 ~~~~~~~~----~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~ 165 (956)
+| .++..|..++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 56 56678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEeecCCceeeccccCCcCeeeecCC--------------CCccccCCeeccCcEEEEEEEecchhHHHhHHHhh
Q 002172 166 IPADARLLEGDPLKIDQSALTGESLPVTKGP--------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (956)
Q Consensus 166 VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~--------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~ 231 (956)
||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+++|++.++|++||.+|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999999999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHh
Q 002172 232 DST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSL 310 (956)
Q Consensus 232 ~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~ 310 (956)
... ...+|+|+.+++++.+++.+.++..++.+++.+...+..|.+.+..+++++++++|++||+.++++++.|+++|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 7899999999999887655444333333333322223337888999999999999999999999999999999999
Q ss_pred CCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCC---------HHHHHHHHHHhccc--c------
Q 002172 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD---------ADAVVLMAARASRV--E------ 373 (956)
Q Consensus 311 ~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~---------~~~~l~~aa~~~~~--~------ 373 (956)
+++++|+++++|+||++|+||||||||||+|+|+|.+++......+.+ ...++..++.|+.. .
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999987542011222 11245666677633 2
Q ss_pred ccChHHHHHHHhcC------ChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC-------c
Q 002172 374 NQDAIDAAIVGMLA------DPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN-------K 440 (956)
Q Consensus 374 ~~~~i~~ai~~~~~------~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 440 (956)
.+||.|.|++..+. +....+..+++++++||||++|||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 46999999998864 3344455667899999999999999999977788899999999999999984 3
Q ss_pred hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc----cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcC
Q 002172 441 SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK----ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITG 516 (956)
Q Consensus 441 ~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~----~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTG 516 (956)
++.++.+.+..++|+++||||+++|||.++..+. ++.|++|+|+|+++|+||||+|++++|+.|+++||+||||||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 4667889999999999999999999998765543 578999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccC
Q 002172 517 DQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVND 596 (956)
Q Consensus 517 D~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvND 596 (956)
||+.||++||++||+..+.....+++|.+++. +.+.++.+.+++++||||++|+||.+||++||++||+|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~-l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDA-LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhh-cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 99999999999999976643345888988875 66778999999999999999999999999999999999999999999
Q ss_pred hhhhccCCeeEEec-cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh-c
Q 002172 597 APALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALI-WK-F 673 (956)
Q Consensus 597 apALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~-~~-~ 673 (956)
|||||+|||||||+ +|+|+||+||||++++|+|++|+.+|+|||++|+|++|++.|.+++|+..+++++++.++ ++ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 799999999999999999999999999999999999999999999999977777766544 33 5
Q ss_pred CCChHHHHHHHHhhccc-ccccccCC-----C-CCCCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcc
Q 002172 674 DFPPFMVLIIAILNDGT-IMTISKDR-----V-KPSPLPDS--WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRT 744 (956)
Q Consensus 674 ~~~p~~~l~i~~~~d~~-~~~l~~d~-----~-~p~~~p~~--~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~ 744 (956)
|+.|+|++|+|+++|++ +++++.++ + +||++|.+ |..+.++.+.+..|...++++++.|++.+..... ..
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~-~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIA-NT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc
Confidence 89999999999999986 56776553 2 33445665 5555555556677888888877777666542110 00
Q ss_pred cCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC---hhHHHHHHHHHHHHHH
Q 002172 745 FGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDR---PGLLLVLAFAVAQLIA 806 (956)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~ 806 (956)
.+. .. .+....++.|+.++++.++..+.+|+.+.+|++. ++..++.++++..++.
T Consensus 810 ~~~-----~~--~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~ 867 (917)
T COG0474 810 LGL-----DL--FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQ 867 (917)
T ss_pred cch-----hh--HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHH
Confidence 010 00 0124556666666666667889999987776554 4555555544444333
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-131 Score=1223.35 Aligned_cols=807 Identities=26% Similarity=0.400 Sum_probs=663.6
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC
Q 002172 16 VDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~ 94 (956)
...|+++.+++++.|+++.+|||++||++|+++||+|++++++ .+.|+.|+++|++|++|+|+++++++++.
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~------- 85 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT------- 85 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH-------
Confidence 4567899999999999999999999999999999999999877 46788999999999999999999999987
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE------CCeEEEEeccCcCCCcEEEEeCCCeeec
Q 002172 95 PDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR------DGKWMEEDAAILVPGDIISVKLGDIIPA 168 (956)
Q Consensus 95 ~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~R------dG~~~~I~~~~LvpGDiV~l~~Gd~VPa 168 (956)
++|.++++|++++++|..++++||++++++.++|+++.+++++|+| ||++++|+++||||||+|.+++||+|||
T Consensus 86 ~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 86 DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 4899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ceEEeecCCceeeccccCCcCeeeecCCCC-------------ccccCCeeccCcEEEEEEEecchhHHHhHHHhhhccc
Q 002172 169 DARLLEGDPLKIDQSALTGESLPVTKGPGD-------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 235 (956)
Q Consensus 169 D~~ll~g~~l~VDeS~LTGES~pv~K~~g~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~ 235 (956)
||+|++|+++.||||+|||||.||.|.+|+ ++|+||.|.+|+++++|++||.+|++||+++++++..
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999998899999999999999998864 6999999999999999999999999999999998866
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcc
Q 002172 236 QQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAIT 315 (956)
Q Consensus 236 ~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilv 315 (956)
+++|+|+.++++++++....++.+++.++ .+.....+|.+.+..++++++++|||+||++++++++.|+++|+|+|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 67899999999988765433332222222 22223456777888899999999999999999999999999999999999
Q ss_pred cccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcccc--ccChHHHHHHHhcCCh--HH
Q 002172 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVE--NQDAIDAAIVGMLADP--KE 391 (956)
Q Consensus 316 k~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~--~~~~i~~ai~~~~~~~--~~ 391 (956)
|+++++|+||++|+||||||||||+|+|+|.+.. . ..+.+.++++.+++.++..+ ..||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 9999999999999999999999999999998753 1 12445666777776654432 3599999998876532 22
Q ss_pred HhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCc----------hHHHHHHHHHHHHHHHcCCeE
Q 002172 392 ARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK----------SEIERRVHAIIDKFAERGLRS 461 (956)
Q Consensus 392 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~----------~~~~~~~~~~i~~~a~~G~Rv 461 (956)
.+..++.++.+||||++|+|++++.+.++..+.++||+||.++++|+.. ++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 3456788899999999999999887666667889999999999999641 344567888899999999999
Q ss_pred EEEEEeecCCCCc---cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC
Q 002172 462 LAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 538 (956)
Q Consensus 462 lavA~~~l~~~~~---~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~ 538 (956)
+++||++++.++. +..|++|+|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998865432 12478899999999999999999999999999999999999999999999999999963 3
Q ss_pred ccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhh
Q 002172 539 SALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (956)
Q Consensus 539 ~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~ 618 (956)
.+++|.+.+. +++.++.+.+++++||||++||||+++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 4677877764 677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCChHHHHHHHHhhcccccccccC
Q 002172 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVLIIAILNDGTIMTISKD 697 (956)
Q Consensus 619 aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~-~~~~p~~~l~i~~~~d~~~~~l~~d 697 (956)
+||+||+||||++|+.+|++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|++.+++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999998887776655555 7999999999999999778999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 002172 698 RVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA 775 (956)
Q Consensus 698 ~~~p~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 775 (956)
++.+.. +|.+|+.+.+...+++.|++.++++++.|++.+... +.. +... ...+.+ .+|...+++|.
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~---~~~~--~~~~~t-~~f~~~~~~~~ 784 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVF------SAN---TVEE--QALFQS-GWFVVGLLSQT 784 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccc---chhh--hhHHHH-HHHHHHHHHHH
Confidence 986652 455577666777778889988877776666543211 000 0000 002233 34555566665
Q ss_pred -HHHHHhcCCCccccChhHHH-HHHHHHHHHHHHHHHHh-ccccccccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 776 -LIFVTRARSWSFVDRPGLLL-VLAFAVAQLIATLIAVY-ANWSFAAIEGV--GWGWAGVVWLYNLIFYIPLDFIKFFIR 850 (956)
Q Consensus 776 -~i~~~rs~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~K~~~r 850 (956)
.+|++|+++.+++.++..+. +++.++.+++.+++++. .+ .++.+.++ .|..|++++.++++ +..++.|.+..
T Consensus 785 ~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~-~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~ 861 (867)
T TIGR01524 785 LVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLG-HSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYI 861 (867)
T ss_pred HHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhh-hhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 68999998755555544333 33333344444444431 01 12334443 33223333434433 56788886654
Q ss_pred Hhc
Q 002172 851 YAL 853 (956)
Q Consensus 851 ~~~ 853 (956)
+.+
T Consensus 862 ~~~ 864 (867)
T TIGR01524 862 RRF 864 (867)
T ss_pred Hhc
Confidence 443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-126 Score=1195.58 Aligned_cols=836 Identities=22% Similarity=0.357 Sum_probs=669.6
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Q 002172 14 EAVDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (956)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~ 91 (956)
...+||..+.+++++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++|+++++++++.....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 34789999999999999998 5699999999999999999998755 568889999999999999999999988764211
Q ss_pred ------CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCe
Q 002172 92 ------GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDI 165 (956)
Q Consensus 92 ------~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~ 165 (956)
....+|.+++++++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 12247899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEeecCCceeeccccCCcCeeeecCCCC----------ccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-
Q 002172 166 IPADARLLEGDPLKIDQSALTGESLPVTKGPGD----------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (956)
Q Consensus 166 VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~----------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (956)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|++||+++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988899999999999999998864 699999999999999999999999999999998776
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCc
Q 002172 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (956)
Q Consensus 235 ~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~il 314 (956)
.+++|+++.++++...+...+++..++.+ +.+...+.+|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFF-ILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 56799999999988775443322222222 22223345677788888999999999999999999999999999999999
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeee--cc-CC--------CC-----HHHHHHHHHHhccc------
Q 002172 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI--FA-KG--------VD-----ADAVVLMAARASRV------ 372 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~-~~--------~~-----~~~~l~~aa~~~~~------ 372 (956)
+|+++++|+||++|+||||||||||+|+|+|.++++.. +. .+ .+ .+.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 99999999999999999999999999999999876421 00 00 11 12455566666431
Q ss_pred ---------cccChHHHHHHHhcC----ChHHHhhccceeEeecCCCCCcceEEEEEc--C-CCcEEEEEeCcHHHHHHh
Q 002172 373 ---------ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYID--S-EGKMHRVSKGAPEQILNL 436 (956)
Q Consensus 373 ---------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~--~-~g~~~~~~KGa~e~il~~ 436 (956)
..+||.|.|++.++. +..+.+..++.++.+||+|++|||++++.. . +++++.++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999988753 234456678899999999999999888753 2 246788999999999999
Q ss_pred hcC----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc--------c---CCCCCceEEEEeccCCCCCc
Q 002172 437 VRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK--------E---SSGGPWQFIGLMPLFDPPRH 495 (956)
Q Consensus 437 ~~~----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~--------~---~~e~~l~~lGli~~~D~lR~ 495 (956)
|+. +++.++.+.+.+++|+++|+||+++||+.++.++. + ..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 963 23456778889999999999999999998864321 1 12789999999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccCCccccccCcc
Q 002172 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLGQNKDESIVAL 553 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~g~~~~~~~~~~ 553 (956)
|++++|++|+++||+|+|+|||++.+|.++|+++|+..+... ..+++|.+++. +.+.
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHH
Confidence 999999999999999999999999999999999999643210 24677777764 5667
Q ss_pred cHHHHhhhcc--eEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCChh
Q 002172 554 PVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 554 ~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~ 630 (956)
++++.+++++ ||||++|+||++||+.||++|++|+|||||+||+||||+|||||||| +|+|+||++||+||+||||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8888888775 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcCCChHHHHHHHHhhccc-ccccccCCCC------CC
Q 002172 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALI-WKFDFPPFMVLIIAILNDGT-IMTISKDRVK------PS 702 (956)
Q Consensus 631 ~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~-~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~------p~ 702 (956)
+|+.+|++||++|+|++|++.|.++.|+..++.++++.++ .+.|++|+|++|+|+++|++ ++++++|++. ||
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999988877766554 45688999999999999985 6889887763 33
Q ss_pred CCCC--ccchHHHH-HHHHHHHHHHHHHHHHHHHHHHh-cCcCCc-ccCc---------ccCCCCchhhH--------HH
Q 002172 703 PLPD--SWKLAEIF-TTGVILGGYLAMMTVIFFWAAYQ-TDFFPR-TFGV---------SSLHEKDIDDW--------KK 760 (956)
Q Consensus 703 ~~p~--~~~~~~~~-~~~~~~G~~~~~~~~~~f~~~~~-~~~~~~-~~~~---------~~~~~~~~~~~--------~~ 760 (956)
+.|+ ....+..+ ...+..|+++++..++.|++.+. .+|... .++. .+..+.....| ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 2222 22222333 33456698998888877665442 122111 1111 00000100000 01
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhcCCCccc--cChhHHHHHHHHHHHHHHHHHHHhcc--ccccccCchhHHHHHHHHHHH
Q 002172 761 LASAIYLQVSTISQA-LIFVTRARSWSFV--DRPGLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGVGWGWAGVVWLYN 835 (956)
Q Consensus 761 ~~~~~~~~~~i~~~~-~i~~~rs~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 835 (956)
..++++|...+++|. ++|++|+++.+++ ..+|.+++.++++..++..++ .|.+ -.++.+.+.+|.+|+.+++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 345667777777786 6799999766543 234556665555444443333 3322 234556777888888888899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 002172 836 LIFYIPLDFIKFFIRYA 852 (956)
Q Consensus 836 ~~~~~~~~~~K~~~r~~ 852 (956)
++.++..++.|++.|++
T Consensus 970 ~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 98888899999887754
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-125 Score=1179.07 Aligned_cols=799 Identities=27% Similarity=0.404 Sum_probs=661.1
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCccCccc-ccHHHHHHHHH-HhhHHHHHHHHHHHHHHHhcCC
Q 002172 16 VDLENVPMEEVFETLRCN-KEGLS-TEAAEERLTIFGYNKLEEKQ-ESKILKFLGFM-WNPLSWVMEAAAIMAIALANGG 91 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt-~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~-~~p~~~~l~~aails~~~~~~~ 91 (956)
.+||.++.+++++.|+++ .+||| ++|+++|+++||+|++++++ ++.|..|+++| ++|++++|++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---- 77 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---- 77 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH----
Confidence 479999999999999998 46999 99999999999999999776 67788899999 999999999999999988
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceE
Q 002172 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (956)
Q Consensus 92 ~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ 171 (956)
++|.+++.|++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||+
T Consensus 78 ---g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 78 ---GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ---cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCceeeccccCCcCeeeecCCCC--------------ccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cc
Q 002172 172 LLEGDPLKIDQSALTGESLPVTKGPGD--------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 236 (956)
Q Consensus 172 ll~g~~l~VDeS~LTGES~pv~K~~g~--------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~ 236 (956)
|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+++++++. .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999987899999999999999999863 799999999999999999999999999999999876 56
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCccc
Q 002172 237 QGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITK 316 (956)
Q Consensus 237 ~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk 316 (956)
++|+|+.+++++.++....++.+++.+++.| ..+.++.+.+...+++++++|||+||++++++++.|++||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7999999999988754433222222222222 334567788888999999999999999999999999999999999999
Q ss_pred ccchhhhhcCceEEeeccccceeeCceeEEeeeeee-cc---C--CC-------------------CHHHHHHHHHHhcc
Q 002172 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI-FA---K--GV-------------------DADAVVLMAARASR 371 (956)
Q Consensus 317 ~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~-~~---~--~~-------------------~~~~~l~~aa~~~~ 371 (956)
+++++|+||++|+||||||||||+|+|+|.+++... .. . +. ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 999999999999999999999999999998865311 00 0 00 01234555555543
Q ss_pred cc--------ccChHHHHHHHhcCCh--HHHhhccceeEeecCCCCCcceEEEEEc-CCCcEEEEEeCcHHHHHHhhcC-
Q 002172 372 VE--------NQDAIDAAIVGMLADP--KEARANIQEVHFLPFNPTDKRTALTYID-SEGKMHRVSKGAPEQILNLVRN- 439 (956)
Q Consensus 372 ~~--------~~~~i~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~-~~g~~~~~~KGa~e~il~~~~~- 439 (956)
.. .+||+|.|++.++... ...+..++.++++||+|.+|||++.++. .+++.+.++|||||.|+..|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 21 2479999998876422 2334567889999999999999998875 3567889999999999999963
Q ss_pred ----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC
Q 002172 440 ----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV 509 (956)
Q Consensus 440 ----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI 509 (956)
+++.++++.+.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++|+++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 134466788889999999999999999974 45799999999999999999999999999999
Q ss_pred eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEE
Q 002172 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (956)
Q Consensus 510 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m 589 (956)
+++|+|||++.||.++|+++||..+ ...+++|.+.+. +++.++++++++.+||||++|+||.++|+.||++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999754 234677777764 6777899999999999999999999999999999999999
Q ss_pred EcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668 (956)
Q Consensus 590 ~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~ 668 (956)
||||+||+||||+|||||||| +|+|+|+++||++|++|||++|+.++++||++|+||+|++.|.++.|+..++.+++..
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999 7999999999999999999999999999999999999999999999998777655443
Q ss_pred -HhhhcCCChHHHHHHHHhhccc-ccccccCCCC------CCCCCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 002172 669 -LIWKFDFPPFMVLIIAILNDGT-IMTISKDRVK------PSPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTD 739 (956)
Q Consensus 669 -~~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~------p~~~p~~-~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~ 739 (956)
+..+.|++|+|++|+|+++|++ .+++++|++. ||++++. ...+.++..+++.|+++++++++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 3456799999999999999987 4888887753 3333333 2234566777888999888877666654311
Q ss_pred cCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---ChhHHHHHHHHHHHHHHHHHHHhcc-
Q 002172 740 FFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAVYAN- 814 (956)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~- 814 (956)
+ ... ...++++|...+++|. +.|++|+++.++++ ..|.++++++++..++. ++.+|.+
T Consensus 782 ------~------~~~----~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~p~ 844 (884)
T TIGR01522 782 ------G------VIT----ARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQ-LLVIYFPP 844 (884)
T ss_pred ------C------cch----hhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0 011 2233445555566665 67999997766553 23455555544433332 2233322
Q ss_pred -ccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 815 -WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRY 851 (956)
Q Consensus 815 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~ 851 (956)
-.++.+.+.+|..|+.+++++++.++..+++|++.|.
T Consensus 845 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 845 LQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1345567788888888899999999999999988764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-124 Score=1176.04 Aligned_cols=816 Identities=22% Similarity=0.339 Sum_probs=647.5
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccCcccc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------C
Q 002172 22 PMEEVFETLRCN-KEGLS--TEAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANG------G 91 (956)
Q Consensus 22 ~~~~~~~~l~~~-~~GLt--~~e~~~r~~~~G~N~l~~~~~-~~~~~~l~~~~~p~~~~l~~aails~~~~~~------~ 91 (956)
+.++++++|+++ ++||| ++||++|+++||+|++++++. +.|..|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999 56999 999999999999999998875 6678899999999999999999999997632 2
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecce
Q 002172 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMAS-LAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADA 170 (956)
Q Consensus 92 ~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~-~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~ 170 (956)
+...+|.++++|+++++++.++++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2234799999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEeecCCceeeccccCCcCeeeecCCCCc--cccCCeeccCcEEEEEEEecchhHHHhHHHhhhcccccchHHHHHHHHH
Q 002172 171 RLLEGDPLKIDQSALTGESLPVTKGPGDS--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248 (956)
Q Consensus 171 ~ll~g~~l~VDeS~LTGES~pv~K~~g~~--v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~ 248 (956)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|+++++|++||.+|++||+++++++..+++|+++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999778999999999999999998765 9999999999999999999999999999999987766789999999887
Q ss_pred HHHHHHHHHHHHHHHH---hHhhcc---c---------cCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCC
Q 002172 249 NFCICSIAVGMIVEII---VMYPIQ---H---------RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGA 313 (956)
Q Consensus 249 ~~~~~~i~i~~~~~~~---~~~~~~---~---------~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~i 313 (956)
.++...+++.+++.++ +.+... . .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 7653322211111111 111111 1 134556778889999999999999999999999999999999
Q ss_pred cccccchhhhhcCceEEeeccccceeeCceeEEeeeeeec--c-CC----CC--HHHHHHHHHHh-ccc-----------
Q 002172 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF--A-KG----VD--ADAVVLMAARA-SRV----------- 372 (956)
Q Consensus 314 lvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~--~-~~----~~--~~~~l~~aa~~-~~~----------- 372 (956)
++|+++++|+||++|+||||||||||+|+|+|.+++.... . .+ .+ ..+++..++.+ +..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999988754211 0 00 11 11223333332 221
Q ss_pred cccChHHHHHHHhcC----ChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCc--------
Q 002172 373 ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-------- 440 (956)
Q Consensus 373 ~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 440 (956)
..+||.|.|++.++. +..+.+..++.++.+||+|++|||+++++..+++++.++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125799999988753 23334456777889999999999999988766778899999999999999641
Q ss_pred --hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc---cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEc
Q 002172 441 --SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (956)
Q Consensus 441 --~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~---~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miT 515 (956)
.+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++|+++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 1235678888999999999999999999864332 23478999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCcc
Q 002172 516 GDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (956)
Q Consensus 516 GD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvN 595 (956)
|||+.||.++|++|||..+ ...+++|.+.+. +.++++++++++.+||||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999754 235788877764 6677899999999999999999999999999999999999999999
Q ss_pred ChhhhccCCeeEEec-cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhhc
Q 002172 596 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKF 673 (956)
Q Consensus 596 DapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~-~~~~~ 673 (956)
|+||||+|||||||| +|+|+|+++||+||++|+|++|+.++++||++|+|++|++.|.+++|+..++..++.. +..++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 9999999999999999999999999999999999999999999999998776655543 34567
Q ss_pred CCChHHHHHHHHhhccc-ccccccCCCCC------CCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCccc
Q 002172 674 DFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTF 745 (956)
Q Consensus 674 ~~~p~~~l~i~~~~d~~-~~~l~~d~~~p------~~~p~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~ 745 (956)
|++|+|++|+|+++|.+ .+++++|++.+ |++++ ....+.++..++.+|++++++.++.|++... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999975 68888887632 22222 2223456677788899988888776665431 1110 0
Q ss_pred Cccc-CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ccccC--hhHHHHHHHHHHHHHHHHHHHhccccccccC
Q 002172 746 GVSS-LHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSW-SFVDR--PGLLLVLAFAVAQLIATLIAVYANWSFAAIE 821 (956)
Q Consensus 746 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~-~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (956)
+... ...... ...++.|.++.+...++.|++|+.+. +++.. .|.+++.++++..++..++..+.+ .++.+.
T Consensus 837 ~~~~~~~~~~~----~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~-~~f~~~ 911 (941)
T TIGR01517 837 GPDEITSHQQG----ELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGG-SFFSTV 911 (941)
T ss_pred Ccccccccccc----hhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHHH-HHhccc
Confidence 0000 000111 23344444443333346799998653 32211 233444444433333322222222 244567
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 822 GVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (956)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~K~~ 848 (956)
+++|..|+.+++++++.++..++.|++
T Consensus 912 ~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 912 SLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 778888888888998888888888876
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-123 Score=1057.12 Aligned_cols=813 Identities=22% Similarity=0.324 Sum_probs=627.2
Q ss_pred CHHHHHHHcCCCC-CCCCH--HHHHHHHHhcCCCccCcccccHH-HHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCCCC
Q 002172 22 PMEEVFETLRCNK-EGLST--EAAEERLTIFGYNKLEEKQESKI-LKFLGFMWNPLSWVMEAAAIMAIALANGG-GKPPD 96 (956)
Q Consensus 22 ~~~~~~~~l~~~~-~GLt~--~e~~~r~~~~G~N~l~~~~~~~~-~~~l~~~~~p~~~~l~~aails~~~~~~~-~~~~~ 96 (956)
..++++++|++++ +||+. +|.++|++.||.|.+|+++++.| ...++.+.+.-..+|.++|++|+.+++.. +.+..
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 4789999999995 69987 88899999999999999886555 45568888888899999999999998743 44678
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeec
Q 002172 97 WQDFVGIVTLLLINSTISFIEENNAGNAAAALMA-SLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (956)
Q Consensus 97 ~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~-~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g 175 (956)
|++++.|++.+++..++..+.+|+.++..+.|.+ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998776544334444444444444444432 334678999999999999999999999999999999999999999
Q ss_pred CCceeeccccCCcCeeeecCC--CCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHH
Q 002172 176 DPLKIDQSALTGESLPVTKGP--GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCI 252 (956)
Q Consensus 176 ~~l~VDeS~LTGES~pv~K~~--g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~ 252 (956)
++|.+|||+|||||.++.|.+ +.+++|||++.+|.++++|+++|.+|+.|+++.++... ++++|+|-.+++++...-
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 56899999999999999999999999999999999877 588999999888765421
Q ss_pred ---HHHHHHHHHHHHhHhhccc-----c---Cccc----hHHH----HHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCC
Q 002172 253 ---CSIAVGMIVEIIVMYPIQH-----R---KYRP----GIDN----LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGA 313 (956)
Q Consensus 253 ---~~i~i~~~~~~~~~~~~~~-----~---~~~~----~~~~----~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~i 313 (956)
+.++...++.++..|.... . .+.. .+.. .+.++++++|+|||+++++++|+++++|.+.+.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 1112222222222222211 1 1111 1222 234577899999999999999999999999999
Q ss_pred cccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccC--------CCCHHH--HHHHH-HHhcc-----------
Q 002172 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK--------GVDADA--VVLMA-ARASR----------- 371 (956)
Q Consensus 314 lvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~--------~~~~~~--~l~~a-a~~~~----------- 371 (956)
+||+++|+|+||+.++||+|||||||+|+|+|.+.++..... ..++.. ++..+ +..+.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 999999999999999999999999999999999877632211 122211 11111 11110
Q ss_pred --ccccChHHHHHHHhc----CChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC------
Q 002172 372 --VENQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN------ 439 (956)
Q Consensus 372 --~~~~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 439 (956)
...++|.+.|+++.. .+.+..|...+.++.+||||.+|+|+++++.++|..+.++|||+|.++..|..
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 012478999998764 35566777888999999999999999999977776359999999999999974
Q ss_pred -----chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCC-------C-ccCCCCCceEEEEeccCCCCCccHHHHHHHHHh
Q 002172 440 -----KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG-------R-KESSGGPWQFIGLMPLFDPPRHDSAETIRRALN 506 (956)
Q Consensus 440 -----~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~-------~-~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~ 506 (956)
+++-++.+.+.++.||.+|+|++++||++.... + .+..+.+++++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 234566889999999999999999999985332 1 245678999999999999999999999999999
Q ss_pred CCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCE
Q 002172 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHI 586 (956)
Q Consensus 507 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~ 586 (956)
|||+|.|+||||..||++||++|||.++...-.++.|.++.+ +++++.++++.+.+|+||.+|.||+.+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~-~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE-LSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh-cCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 999999999999999999999999988765567888988874 8889999999999999999999999999999999999
Q ss_pred EEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 587 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665 (956)
Q Consensus 587 V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~ 665 (956)
||+||||.||+||||+||||.||| .|||+|||+|||||+||||++|++++.|||+.|.||+||++|+++.|+..++..+
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999986444433
Q ss_pred H-HHHhhhcCCChHHHHHHHHhhccc-ccccccCCCCC-------CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 666 L-LALIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKP-------SPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAY 736 (956)
Q Consensus 666 ~-~~~~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~p-------~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~ 736 (956)
. ....-..|++.+|+||+|+++|.+ +++++.|++.+ -.|..+...+-++...+.+.+|+.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 3 434445899999999999999987 69999887632 22444555556777778888898877776554433
Q ss_pred hcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHH-HHHHHhcCC-Ccc----ccChhHHHHHHHHHHHHHHHHHH
Q 002172 737 QTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARS-WSF----VDRPGLLLVLAFAVAQLIATLIA 810 (956)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~-~~~----~~~~~~~l~~~~~~~~~~~~~~~ 810 (956)
. . |++.....+++ ....++.|-..+++|. .-|+.|.-. ... ++|+ ++++++...+++..+.
T Consensus 901 ~--i----f~~~~~~~~~~----~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviI 967 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPP----SVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVII 967 (1034)
T ss_pred h--h----hccCCCCCCch----hhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhh
Confidence 1 1 22222222222 2332333344455554 568888732 122 2222 2222222222222222
Q ss_pred HhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 811 VYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (956)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 848 (956)
+...-.++...+++|..|+++..+.++.++.-.+.|.+
T Consensus 968 veF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 968 VEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 22112245678888888888887777776665555543
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-116 Score=1097.40 Aligned_cols=782 Identities=28% Similarity=0.389 Sum_probs=616.1
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEC
Q 002172 65 FLGFMWNPLSWVMEAAAIMAIALANGG---GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD 141 (956)
Q Consensus 65 ~l~~~~~p~~~~l~~aails~~~~~~~---~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd 141 (956)
+++||++|++++|+++++++++++... ....+|.++++|++++++|+.++++||+++++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 478999999999999999999986422 12258999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCC-------------CccccCCeecc
Q 002172 142 GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG-------------DSVYSGSTCKQ 208 (956)
Q Consensus 142 G~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g-------------~~v~~Gs~v~~ 208 (956)
|++++|+++||||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.++ +++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998789999999999999999875 78999999999
Q ss_pred CcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-c----ccCcc----chH
Q 002172 209 GEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI-Q----HRKYR----PGI 278 (956)
Q Consensus 209 G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~-~----~~~~~----~~~ 278 (956)
|+++++|++||.+|++||++++++.. .+++|+|+.+++++.++...+++.+++.+++.... . ..+|. ..+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 66899999999998765443322222222211111 0 11221 233
Q ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee------
Q 002172 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI------ 352 (956)
Q Consensus 279 ~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~------ 352 (956)
..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 34567899999999999999999999999999999999999999999999999999999999999998875311
Q ss_pred -----ccCCCC-------------------HHHHHHHHHHhcccc------------ccChHHHHHHHhcCChH------
Q 002172 353 -----FAKGVD-------------------ADAVVLMAARASRVE------------NQDAIDAAIVGMLADPK------ 390 (956)
Q Consensus 353 -----~~~~~~-------------------~~~~l~~aa~~~~~~------------~~~~i~~ai~~~~~~~~------ 390 (956)
...+++ .+.++..++.|+... .+||.|.|++.++.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 000000 123455566665321 25899999987642210
Q ss_pred --------------HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC-----------chHHHH
Q 002172 391 --------------EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN-----------KSEIER 445 (956)
Q Consensus 391 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 445 (956)
..+..++.++.+||||++|||++++++ +++++.++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124457789999999999999999875 467889999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEEeecCCCC----------ccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEE
Q 002172 446 RVHAIIDKFAE-RGLRSLAVAYQEVPDGR----------KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514 (956)
Q Consensus 446 ~~~~~i~~~a~-~G~RvlavA~~~l~~~~----------~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~mi 514 (956)
++.+.+++|++ +|+||+++|||.++.++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHhCCCCCCCC--CccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcC
Q 002172 515 TGDQLAIAKETGRRLGMGTNMYP--SSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (956)
Q Consensus 515 TGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GD 592 (956)
|||++.||.++|+++|+..+... ...++|.+.+. +.+.+..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 23456666543 5566677778888999999999999999999999999999999
Q ss_pred CccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 002172 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IW 671 (956)
Q Consensus 593 GvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~-~~ 671 (956)
|+||+||||+||||||||+|+|+||++||+++.+|||++|++++++||++|+|++|++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887766544 35
Q ss_pred hcCCChHHHHHHHHhhccc-ccccccCCCC------CCCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcCC
Q 002172 672 KFDFPPFMVLIIAILNDGT-IMTISKDRVK------PSPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQT-DFFP 742 (956)
Q Consensus 672 ~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~------p~~~p~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~-~~~~ 742 (956)
+.|++|+|++|+|+++|++ +++++.+++. ||+.+. ....+..+..+++.|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 5799999999999999965 5788877652 333333 23344677788889999998877666544321 2111
Q ss_pred c--cc--CcccCCCCch---hhHHHHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---ChhHHHHHHHHHHHHHHHHHHH
Q 002172 743 R--TF--GVSSLHEKDI---DDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAV 811 (956)
Q Consensus 743 ~--~~--~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~ 811 (956)
. .. +..+..+... ... ...++++|...+++|. +.|++|+++.+++. ..|.|+++++++..++. ++..
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~ 876 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGK-QPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH-FLIL 876 (917)
T ss_pred ccccccccccccccccccccccc-cchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH-HHHH
Confidence 0 00 0000000000 000 2234556666666775 67999997666443 13455555544433332 2223
Q ss_pred hcc--ccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 812 YAN--WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIR 850 (956)
Q Consensus 812 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r 850 (956)
|.+ -.++.+.+.+|..|+++++++++.++..+++|++.|
T Consensus 877 ~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 877 YVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 322 134567788899999999999999999999998753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-118 Score=1018.29 Aligned_cols=849 Identities=24% Similarity=0.393 Sum_probs=691.2
Q ss_pred ccHHHhhccc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHH
Q 002172 6 ETMEAVLKEA-VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAI 82 (956)
Q Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aai 82 (956)
-++++.++|. +|.|++|.+|+.++++++ .+|||.++|.+++++-|||.+++|+ .+.|.+|++|+++.+..+++++++
T Consensus 26 ~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~ 105 (1019)
T KOG0203|consen 26 KELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAI 105 (1019)
T ss_pred hhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHH
Confidence 4688888988 999999999999999999 6799999999999999999998777 678889999999999999999999
Q ss_pred HHHHHhcCC-----CCCCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCc
Q 002172 83 MAIALANGG-----GKPPD-WQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGD 156 (956)
Q Consensus 83 ls~~~~~~~-----~~~~~-~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGD 156 (956)
++++.+... ..+.+ .+-+.++..++++..+..|+||.+..+-++++.++.|+.+.|+|||+...+.+++|||||
T Consensus 106 l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD 185 (1019)
T KOG0203|consen 106 LCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGD 185 (1019)
T ss_pred HHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhccccc
Confidence 998875321 11122 222233334455677889999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCC----------CCccccCCeeccCcEEEEEEEecchhHHHh
Q 002172 157 IISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDSVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (956)
Q Consensus 157 iV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~----------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gk 226 (956)
+|.++-||+||||.|++++..+++|+|+|||||+|....+ .|+.|.+|.+.+|.++++|++||.+|.+|+
T Consensus 186 ~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ 265 (1019)
T KOG0203|consen 186 LVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGR 265 (1019)
T ss_pred ceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEee
Confidence 9999999999999999999999999999999999999876 367999999999999999999999999999
Q ss_pred HHHhhhc-ccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 002172 227 AAHLVDS-TNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (956)
Q Consensus 227 i~~l~~~-~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~ 305 (956)
|+.+... ...++|+++.++.+..+... +++.+.+.++..-...++.|..++..++.++++.+|++||+.+++.++.-+
T Consensus 266 ia~l~~~~~~~~t~~~~ei~~fi~~it~-vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlta 344 (1019)
T KOG0203|consen 266 IASLASGLEDGKTPIAKEIEHFIHIITG-VAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTA 344 (1019)
T ss_pred hhhhhccCCCCCCcchhhhhchHHHHHH-HHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHH
Confidence 9998765 36788899988887665322 222222222222223367778888888889999999999999999999999
Q ss_pred HHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccC----------------CCCHHHHHHHHHHh
Q 002172 306 HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK----------------GVDADAVVLMAARA 369 (956)
Q Consensus 306 ~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~----------------~~~~~~~l~~aa~~ 369 (956)
+||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.+++.... +..-..+.+++..|
T Consensus 345 krMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lC 424 (1019)
T KOG0203|consen 345 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLC 424 (1019)
T ss_pred HHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999877532110 01112456666666
Q ss_pred ccc---------------cccChHHHHHHHhc----CChHHHhhccceeEeecCCCCCcceEEEEEcC---CCcEEEEEe
Q 002172 370 SRV---------------ENQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDS---EGKMHRVSK 427 (956)
Q Consensus 370 ~~~---------------~~~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~K 427 (956)
++. ..+|+.+.|++++. ++..+.|...+.+.++||||.+|+.-.++... +.+..+..|
T Consensus 425 n~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mK 504 (1019)
T KOG0203|consen 425 NRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMK 504 (1019)
T ss_pred CcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeec
Confidence 542 24578888988764 34467788889999999999999987776643 357788899
Q ss_pred CcHHHHHHhhcC----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc-----------cCCCCCceEEEE
Q 002172 428 GAPEQILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-----------ESSGGPWQFIGL 486 (956)
Q Consensus 428 Ga~e~il~~~~~----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~-----------~~~e~~l~~lGl 486 (956)
||||.++++|+. ++...+.+++...++...|-||++++++.+++++. ...-.+|.|+|+
T Consensus 505 Gape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl 584 (1019)
T KOG0203|consen 505 GAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGL 584 (1019)
T ss_pred CChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccch
Confidence 999999999984 34567788889999999999999999998875531 234567999999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----------------------CCccccCC
Q 002172 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------------------PSSALLGQ 544 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~l~g~ 544 (956)
+++.||||..+|+++.+||.|||+|+|+||||+.||+++|+++||..+.. ...++.|.
T Consensus 585 ~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~ 664 (1019)
T KOG0203|consen 585 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGS 664 (1019)
T ss_pred hhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecc
Confidence 99999999999999999999999999999999999999999999754211 11235555
Q ss_pred ccccccCcccHHHHhhhcc--eEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccc
Q 002172 545 NKDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASD 621 (956)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aAD 621 (956)
++. .+...++++++++.. ||||.||+||+.||+.+|++|.+|++||||+||+||||+|||||||| .|+|++|+|||
T Consensus 665 eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAAD 743 (1019)
T KOG0203|consen 665 ELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAAD 743 (1019)
T ss_pred ccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcc
Confidence 554 367778999998876 99999999999999999999999999999999999999999999999 99999999999
Q ss_pred eeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCChHHHHHHHHhhccc-ccccccCCC
Q 002172 622 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDGT-IMTISKDRV 699 (956)
Q Consensus 622 ivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~-~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~ 699 (956)
+||+||||++|+..|++||-+|+|+||.+.|.+++|+..+..++++++ ..|+|+.++.+|.|.+.+|.. +++++++..
T Consensus 744 mILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~a 823 (1019)
T KOG0203|consen 744 MILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKA 823 (1019)
T ss_pred eEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCc
Confidence 999999999999999999999999999999999999999888776544 467788999999999999986 588998764
Q ss_pred ------CCCCCCC--ccchHH-HHHHHHHHHHHHHHHHHHH-HHHHHhcCcCCcc----------cCcccCCCCchhhHH
Q 002172 700 ------KPSPLPD--SWKLAE-IFTTGVILGGYLAMMTVIF-FWAAYQTDFFPRT----------FGVSSLHEKDIDDWK 759 (956)
Q Consensus 700 ------~p~~~p~--~~~~~~-~~~~~~~~G~~~~~~~~~~-f~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 759 (956)
++|+.|. ..-..+ +...++.+|+++++..|+. |+.+...+|+|.. -+++++.|++.++|.
T Consensus 824 EsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWt 903 (1019)
T KOG0203|consen 824 ESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWT 903 (1019)
T ss_pred hhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhcccccc
Confidence 3444443 233334 5666788999999998865 4556667777643 234456666655542
Q ss_pred --------HHHHHHHHHHHHHHHH-HHHHHhcCCCcccc--ChhHHHHHHHHHHHHHHHHHHHhcc-ccccccCchhHHH
Q 002172 760 --------KLASAIYLQVSTISQA-LIFVTRARSWSFVD--RPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVGWGW 827 (956)
Q Consensus 760 --------~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 827 (956)
-.+.+.||...+..|+ -++.+.+++-+++. ..|+.+++++++-.++++++.+... ...+.+.|..|.|
T Consensus 904 yeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~ 983 (1019)
T KOG0203|consen 904 YEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQW 983 (1019)
T ss_pred HHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEE
Confidence 1234455555566776 45666666666554 4688888888876666666543322 1234577888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 002172 828 AGVVWLYNLIFYIPLDFIKFFIRYALSGKAW 858 (956)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~ 858 (956)
|+..+.++++.++.+|++|++.|.+. ..|
T Consensus 984 wl~a~P~~ilIfvydE~Rk~~IR~~P--~gw 1012 (1019)
T KOG0203|consen 984 WLVAFPFGILIFVYDEVRKLFIRRYP--GGW 1012 (1019)
T ss_pred EEecccceeeeeeHHHHHhHhhhhCC--Cch
Confidence 99999999999999999999999876 445
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-113 Score=1085.77 Aligned_cols=737 Identities=22% Similarity=0.267 Sum_probs=578.9
Q ss_pred CCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 002172 34 KEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTI 113 (956)
Q Consensus 34 ~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i 113 (956)
.+|||++|+++|+++||+|+++.++++.|..|++++++|+.+++++++++.++- .+|++++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998888888999999999988877765554432 4789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEe--CCCeeecceEEeecCCceeeccccCCcCee
Q 002172 114 SFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (956)
Q Consensus 114 ~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~--~Gd~VPaD~~ll~g~~l~VDeS~LTGES~p 191 (956)
++++++++.++++++. ..+++++|+|||+|++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~-~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMV-HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhh-cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc
Confidence 9999999999888864 3567899999999999999999999999999 999999999999997 58999999999999
Q ss_pred eecCCC------------------CccccCCeecc-------CcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHH
Q 002172 192 VTKGPG------------------DSVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLT 245 (956)
Q Consensus 192 v~K~~g------------------~~v~~Gs~v~~-------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~ 245 (956)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+++... ...+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999985 78999999999999999999988765 55678888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhc
Q 002172 246 AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMA 325 (956)
Q Consensus 246 ~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg 325 (956)
++..++++..+++.++ .++.....+.++...+..++.+++++||++||++++++++.|++||+|+|++||++.++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7765543322222221 122222234567788889999999999999999999999999999999999999999999999
Q ss_pred CceEEeeccccceeeCceeEEeeeeeeccCC----------CCHHHHHHHHHHhccc------cccChHHHHHHHhcCCh
Q 002172 326 GMDVLCSDKTGTLTLNKLSVDKNLIEIFAKG----------VDADAVVLMAARASRV------ENQDAIDAAIVGMLADP 389 (956)
Q Consensus 326 ~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~----------~~~~~~l~~aa~~~~~------~~~~~i~~ai~~~~~~~ 389 (956)
++|++|||||||||+|+|+|.+......... ..........+.|+.. ..+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999988653111000 1112233444445432 23699999999875311
Q ss_pred ----HH--H-------------hhccceeEeecCCCCCcceEEEEEcC-CCcEEEEEeCcHHHHHHhhcCchHHHHHHHH
Q 002172 390 ----KE--A-------------RANIQEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHA 449 (956)
Q Consensus 390 ----~~--~-------------~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 449 (956)
.+ . ...+++++.+||+|++|||+++++.. +++.+.++|||||.|+++|+.. ..++++++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 00 0 13577889999999999999998864 3567899999999999999853 35678889
Q ss_pred HHHHHHHcCCeEEEEEEeecCCC--------CccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHH
Q 002172 450 IIDKFAERGLRSLAVAYQEVPDG--------RKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (956)
Q Consensus 450 ~i~~~a~~G~RvlavA~~~l~~~--------~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~t 521 (956)
.+++|+++|+||+|+|||++++. ++++.|++|+|+|+++|+||+|||++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------CccccCCcccc--
Q 002172 522 AKETGRRLGMGTNMYP---------------------------------------------------SSALLGQNKDE-- 548 (956)
Q Consensus 522 A~~ia~~lGi~~~~~~---------------------------------------------------~~~l~g~~~~~-- 548 (956)
|.+||++|||..+... ..+++|++.+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 01222222211
Q ss_pred ccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC
Q 002172 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (956)
Q Consensus 549 ~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~ 628 (956)
.+.+.++.+++.+++||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ ||+ .|||+++.+|+
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 0123457778889999999999999999999999999999999999999999999999999864 555 79999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHhhccc-ccccccCCCCCC---CC
Q 002172 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKPS---PL 704 (956)
Q Consensus 629 ~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~p~---~~ 704 (956)
|++|+.+|++||+++.|+++.+.|.+.+++...+..++. ...+.+++++|++|++++++.+ .++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSIL-YLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 999999999999999999999999999888766554433 3456889999999999999987 577777765321 22
Q ss_pred C-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 002172 705 P-DSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRAR 783 (956)
Q Consensus 705 p-~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~ 783 (956)
| .+......+...+.+|++..+..+..|++.....|+....... ..+..... ...+++| .++.+.+...++.++.
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~T~~f-~~~~~~~~~~~~~~~~ 998 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVD-LEKENFPN--LLNTVLF-FVSSFQYLITAIVNSK 998 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCC-cccccCcc--HHHHHHH-HHHHHHHHHheEEEcC
Confidence 3 3333345566666777777777776666655444431111100 10011101 1233444 4555566667777776
Q ss_pred CCccc
Q 002172 784 SWSFV 788 (956)
Q Consensus 784 ~~~~~ 788 (956)
+.+|.
T Consensus 999 g~pf~ 1003 (1054)
T TIGR01657 999 GPPFR 1003 (1054)
T ss_pred Ccchh
Confidence 65553
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-100 Score=972.96 Aligned_cols=785 Identities=18% Similarity=0.249 Sum_probs=581.1
Q ss_pred cCCCccCcccccHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 49 FGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNA 124 (956)
Q Consensus 49 ~G~N~l~~~~~~~~----~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~ 124 (956)
|.+|.+...|++.| +.|++||.+|.+++|++.+++++++...... .+....+++++++++.+.+++|+++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~--~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY--RGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC--ccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998876 6889999999999999999999986433221 23334555666668899999999999998
Q ss_pred HHHHhhcCCCcEEEEEC-CeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCC----ceeeccccCCcCeeeecCCC--
Q 002172 125 AAALMASLAPKSKVLRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG-- 197 (956)
Q Consensus 125 ~~~l~~~~~~~~~V~Rd-G~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~----l~VDeS~LTGES~pv~K~~g-- 197 (956)
.++. ..++++|+|| |++++++|+||+|||+|.|++||+||||++|++++. ++||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 3578999997 899999999999999999999999999999998544 78999999999999998631
Q ss_pred ----------------------------------------------CccccCCeecc-CcEEEEEEEecchhHHHhHHHh
Q 002172 198 ----------------------------------------------DSVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (956)
Q Consensus 198 ----------------------------------------------~~v~~Gs~v~~-G~~~~~V~~tG~~T~~gki~~l 230 (956)
|.+|+||.+++ |.++|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46899999999 899999999999998866321
Q ss_pred hhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccc----cCcc---------------chHHHHHHHHHhhcCC
Q 002172 231 VDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH----RKYR---------------PGIDNLLVLLIGGIPI 291 (956)
Q Consensus 231 ~~~~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~----~~~~---------------~~~~~~l~llv~~iP~ 291 (956)
....+.+++++.++++..+++++.++.+++..++...... ..|. ..+..++.++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 1235678999999999876554333333332222111111 0111 1456678889999999
Q ss_pred chhHHHHHHHHHHH------HHHHhC----CCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee--ccCCC--
Q 002172 292 AMPTVLSVTMAIGS------HRLSLQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI--FAKGV-- 357 (956)
Q Consensus 292 aLp~~~~v~~~~~~------~~l~~~----~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~~~-- 357 (956)
+||+.+++++++++ .+|.++ ++++|+++++|+||++++||+|||||||+|+|+++++.+.. +..+.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788874 59999999999999999999999999999999999986521 10000
Q ss_pred -----------------------------C----------------HHHHHHHHHHhccc--------------cccChH
Q 002172 358 -----------------------------D----------------ADAVVLMAARASRV--------------ENQDAI 378 (956)
Q Consensus 358 -----------------------------~----------------~~~~l~~aa~~~~~--------------~~~~~i 378 (956)
+ ..+++..++.|+.. ..++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 02334455555432 125899
Q ss_pred HHHHHHhcCChH------------------HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC-
Q 002172 379 DAAIVGMLADPK------------------EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN- 439 (956)
Q Consensus 379 ~~ai~~~~~~~~------------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 439 (956)
|.|++..+...+ .....++.++.+||+|+||||++++++++|+.++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999998653211 0123578889999999999999999988888899999999999999985
Q ss_pred chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC-------------------------ccCCCCCceEEEEeccCCCCC
Q 002172 440 KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR-------------------------KESSGGPWQFIGLMPLFDPPR 494 (956)
Q Consensus 440 ~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~-------------------------~~~~e~~l~~lGli~~~D~lR 494 (956)
.++.++++.+++++|+++|+||+++|||.+++++ .++.|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 3456778899999999999999999999987542 134689999999999999999
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC------------------------------------
Q 002172 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS------------------------------------ 538 (956)
Q Consensus 495 ~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~------------------------------------ 538 (956)
+|++++|+.|++|||+|||+|||+++||.+||++||+.++....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997543211
Q ss_pred ---ccccCCccccccCc---ccHHHHhhhcc--eEEeeChhhHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCeeEEe
Q 002172 539 ---SALLGQNKDESIVA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 539 ---~~l~g~~~~~~~~~---~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
.+++|..++..+++ ..+.+++.+++ ||||++|+||.+||+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 13334333321111 12444556665 99999999999999999998 99999999999999999999999998
Q ss_pred c--cccHHHhhccceeecCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----CCChHHHHH
Q 002172 610 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKF----DFPPFMVLI 682 (956)
Q Consensus 610 g--~gtd~Ak~aADivL~~~~~~~iv~ai-~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~----~~~p~~~l~ 682 (956)
. +|. .|+.+||+++.+ |+.+..++ .|||++|+|+++++.|.+++|+.+++..+++.++.++ ++.+++++|
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4 333 466799999975 99999988 7899999999999999999999988888777665433 567788999
Q ss_pred HHHhhccc-ccccc-cCCCC-------CCC-----CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcc
Q 002172 683 IAILNDGT-IMTIS-KDRVK-------PSP-----LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVS 748 (956)
Q Consensus 683 i~~~~d~~-~~~l~-~d~~~-------p~~-----~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~ 748 (956)
+|++++.+ +++++ +|+.. +|. +.+.....+.|..+++.|++.+++.+++.++.+...... ..|
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g-- 947 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG-- 947 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC--
Confidence 99998876 56775 33331 121 112223345677788899999988776555444321110 011
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHHHHHHHHHHhc-c---ccccccCchh
Q 002172 749 SLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYA-N---WSFAAIEGVG 824 (956)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~ 824 (956)
...++..+.+.+|..+.+..++. +...++.|+|+.....|+.+.+.+.... +...+. . ++........
T Consensus 948 -----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wt~~~~~~~~~S~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s 1019 (1057)
T TIGR01652 948 -----SLDDFSSVGVIVFTALVVIVNLK-IALEINRWNWISLITIWGSILVWLIFVI--VYSSIFPSPAFYKAAPRVMGT 1019 (1057)
T ss_pred -----cccchhhHHHHHHHHHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHHHHHHH--HHHhhcccccHHHHHHHHHcc
Confidence 11112245566666655555543 3345566765544333333322211111 011010 0 1111112223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002172 825 WGWAGVVWLYNLIFYIPLDFIKFFIRYALS 854 (956)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~ 854 (956)
+.+|+.+++..++.++|+.++|++.|.+.|
T Consensus 1020 ~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 1020 FGFWLVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 556677788888889999999999888886
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-98 Score=886.73 Aligned_cols=545 Identities=24% Similarity=0.378 Sum_probs=451.2
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-cEE
Q 002172 67 GFMWNPLSWVMEAAAIMAIALANGGG--KPPDW--QDFVGIVTLLLINSTISFIE----ENNAGNAAAALMASLAP-KSK 137 (956)
Q Consensus 67 ~~~~~p~~~~l~~aails~~~~~~~~--~~~~~--~~~~~ii~~~li~~~i~~~~----e~~a~~~~~~l~~~~~~-~~~ 137 (956)
.+++||+.|+++++++++++++.... ...+| .+.+.|.++++++.+++.++ |+|+++++++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 56899999999999999998864210 01122 44666777777777777776 78999999999998886 776
Q ss_pred -EEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCC---CccccCCeeccCcEEE
Q 002172 138 -VLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEA 213 (956)
Q Consensus 138 -V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g---~~v~~Gs~v~~G~~~~ 213 (956)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. +||||+|||||.||.|++| +.+|+||.+.+|++++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7899999999999999999999999999999999999986 8999999999999999999 8899999999999999
Q ss_pred EEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-cccCccchHHHHHHHHHhhcCC
Q 002172 214 VVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI-QHRKYRPGIDNLLVLLIGGIPI 291 (956)
Q Consensus 214 ~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~-~~~~~~~~~~~~l~llv~~iP~ 291 (956)
+|++||.+|++||+.++++++ .+++|+|.....+...+.+ +++..+ +..+.. ...++...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l~~~---~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFLVVI---LTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHHHHH---HHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999887 5788998766554332211 111111 111111 0113334556677888899999
Q ss_pred chhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcc
Q 002172 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASR 371 (956)
Q Consensus 292 aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~ 371 (956)
+||..++++.+.|+.||+|+|+++|+++++|+||++|++|||||||||+|++.+.+.. .. .+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999877665532 22 24455667777766654
Q ss_pred ccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCch-HHHHHHHHH
Q 002172 372 VENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRVHAI 450 (956)
Q Consensus 372 ~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~ 450 (956)
. +.||++.|++.++...... ......+++||++++|+|++.+ +|+ .+.||+|+.++++|.... ..+.++++.
T Consensus 340 ~-s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 A-DDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred C-CCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 3 4589999998875421100 0011235689999999998864 343 456999999999997421 223346667
Q ss_pred HHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002172 451 IDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (956)
Q Consensus 451 i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (956)
+++++++|+|+++++. +++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 7889999999999874 348999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002172 531 MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 531 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
|. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||
T Consensus 480 I~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 94 379999999999999999999999999999999999999999999999
Q ss_pred cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 611 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL 669 (956)
Q Consensus 611 ~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~ 669 (956)
+|||+||++||+||+||||++|++++++||++|.|+++++.|.++.|++.++..+...+
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998776655433
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-95 Score=915.20 Aligned_cols=781 Identities=16% Similarity=0.180 Sum_probs=566.8
Q ss_pred hcCCCccCcccccHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 48 IFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGN 123 (956)
Q Consensus 48 ~~G~N~l~~~~~~~~----~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~ 123 (956)
+|..|.+...|++.| +.+++||..+.++++++.+++++++..... ..+...+++++++++.++.+.++++++++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~k 163 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRHR 163 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999876 577899999999999999999988654322 23456677888888899999999999999
Q ss_pred HHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCC----ceeeccccCCcCeeeecCCC--
Q 002172 124 AAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG-- 197 (956)
Q Consensus 124 ~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~----l~VDeS~LTGES~pv~K~~g-- 197 (956)
+.++.+ +.+++|+|+|++++++|++|+|||+|.+++||.||||++|++++. ++||||+|||||.|+.|.++
T Consensus 164 ~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~ 240 (1178)
T PLN03190 164 SDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQE 240 (1178)
T ss_pred hHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccch
Confidence 887654 578999999999999999999999999999999999999998332 58999999999999999642
Q ss_pred -------------------------------------------CccccCCeeccCc-EEEEEEEecchhHHHhHHHhhhc
Q 002172 198 -------------------------------------------DSVYSGSTCKQGE-IEAVVIATGVHTFFGKAAHLVDS 233 (956)
Q Consensus 198 -------------------------------------------~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki~~l~~~ 233 (956)
+.+++||.+++.+ ++|+|++||.+|+.. .+....
T Consensus 241 ~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~--~N~~~~ 318 (1178)
T PLN03190 241 TLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM--LNNSGA 318 (1178)
T ss_pred hhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh--hcCCCC
Confidence 3467788888774 999999999999741 122222
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHh--Hhhccc-c-----Cc--------------------cch---HHHHH
Q 002172 234 TNQQGHFQKVLTAIGNFCICSIAVGMIVEIIV--MYPIQH-R-----KY--------------------RPG---IDNLL 282 (956)
Q Consensus 234 ~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~--~~~~~~-~-----~~--------------------~~~---~~~~l 282 (956)
..+.+++++.+|++..+++++.++.+++..+. .|.... . .| ... +...+
T Consensus 319 ~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l 398 (1178)
T PLN03190 319 PSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSV 398 (1178)
T ss_pred CCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHH
Confidence 25789999999998776544333332222222 111100 0 00 011 22234
Q ss_pred HHHHhhcCCchhHHHHHHHHHHHHHHHhCC----------CcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee
Q 002172 283 VLLIGGIPIAMPTVLSVTMAIGSHRLSLQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI 352 (956)
Q Consensus 283 ~llv~~iP~aLp~~~~v~~~~~~~~l~~~~----------ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~ 352 (956)
+++..+||++|++.++++...++.++.++. +.+|+.+.+|+||+|++||+|||||||+|+|+++++.+..
T Consensus 399 il~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g 478 (1178)
T PLN03190 399 IVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWG 478 (1178)
T ss_pred HHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECC
Confidence 566789999999999999988888887754 8899999999999999999999999999999999987621
Q ss_pred --ccC-----------------C----------------------CC-H-----HHHHHHHHHhccc-------------
Q 002172 353 --FAK-----------------G----------------------VD-A-----DAVVLMAARASRV------------- 372 (956)
Q Consensus 353 --~~~-----------------~----------------------~~-~-----~~~l~~aa~~~~~------------- 372 (956)
+.. + .+ + .+++.+.+.|+..
T Consensus 479 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~ 558 (1178)
T PLN03190 479 VDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTV 558 (1178)
T ss_pred EEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccc
Confidence 100 0 00 0 1245555666532
Q ss_pred -----cccChHHHHHHHhcCCh----------------HHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHH
Q 002172 373 -----ENQDAIDAAIVGMLADP----------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPE 431 (956)
Q Consensus 373 -----~~~~~i~~ai~~~~~~~----------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e 431 (956)
...+|.|.|++..+.+. ...+..++.++.+||+|+||||++++++++|+.++++|||||
T Consensus 559 ~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e 638 (1178)
T PLN03190 559 KLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADT 638 (1178)
T ss_pred cceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcH
Confidence 11368999998875332 123557889999999999999999999888889999999999
Q ss_pred HHHHhhcCc--hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc-------------------------cCCCCCceEE
Q 002172 432 QILNLVRNK--SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-------------------------ESSGGPWQFI 484 (956)
Q Consensus 432 ~il~~~~~~--~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~-------------------------~~~e~~l~~l 484 (956)
.|+++|... ++.++++.+++++|+++|+|||++|||.+++++. +..|++|+++
T Consensus 639 ~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~l 718 (1178)
T PLN03190 639 SMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTIL 718 (1178)
T ss_pred HHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEE
Confidence 999999753 3567788899999999999999999999975321 3468999999
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc-------------------------
Q 002172 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS------------------------- 539 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~------------------------- 539 (956)
|+++++||||++++++|++|+++||+|||+|||+.+||++||++|||.++.....
T Consensus 719 G~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~ 798 (1178)
T PLN03190 719 GASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLT 798 (1178)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhcc
Confidence 9999999999999999999999999999999999999999999999975432111
Q ss_pred ----------------------cccCCccccccC---cccHHHHhhhcc--eEEeeChhhHHHHHHHHhhC-CCEEEEEc
Q 002172 540 ----------------------ALLGQNKDESIV---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTG 591 (956)
Q Consensus 540 ----------------------~l~g~~~~~~~~---~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~-g~~V~m~G 591 (956)
+++|..++..++ ...+.++..+++ ||||++|+||++||+.+|++ +++|+|||
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIG 878 (1178)
T PLN03190 799 TVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIG 878 (1178)
T ss_pred ccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 111211111111 123455666666 79999999999999999997 58999999
Q ss_pred CCccChhhhccCCeeEEec--cccHHHhhccceeecCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 592 DGVNDAPALKKADIGIAVA--DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668 (956)
Q Consensus 592 DGvNDapALk~AdVGIamg--~gtd~Ak~aADivL~~~~~~~iv~ai~-~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~ 668 (956)
||+||+||||+|||||++. +|.+|++ |||+++.+ |..+..++. |||+.|+|+.+.+.|.+++|+.++++.+++.
T Consensus 879 DGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~ 955 (1178)
T PLN03190 879 DGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYV 955 (1178)
T ss_pred CCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999974 6666666 99999966 455555554 9999999999999999999999999999988
Q ss_pred HhhhcCC----ChHHHHHHHH-hhcccccccc-cCCCCCCC------------CCCccchHHHHHHHHHHHHHHHHHHHH
Q 002172 669 LIWKFDF----PPFMVLIIAI-LNDGTIMTIS-KDRVKPSP------------LPDSWKLAEIFTTGVILGGYLAMMTVI 730 (956)
Q Consensus 669 ~~~~~~~----~p~~~l~i~~-~~d~~~~~l~-~d~~~p~~------------~p~~~~~~~~~~~~~~~G~~~~~~~~~ 730 (956)
++.+|.- .++.+.+.|+ ++..+++.++ +|+.-|.. +.+.....+.|+.|++.|++.+++.|+
T Consensus 956 ~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff 1035 (1178)
T PLN03190 956 LFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFF 1035 (1178)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 8777643 3444444444 4455566664 66653321 112223345788889999999998876
Q ss_pred HHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHH-HHHHHH
Q 002172 731 FFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQ-LIATLI 809 (956)
Q Consensus 731 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 809 (956)
+.++.+..... + +. ....++++.+.++.++ -+...+++|+|.....+|+.+.+.+.. ++...+
T Consensus 1036 ~~~~~~~~~~~----~-----~~------~~~~~~~~~~v~~vnl-~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~ 1099 (1178)
T PLN03190 1036 VPLFAYWASTI----D-----GS------SIGDLWTLAVVILVNL-HLAMDIIRWNWITHAAIWGSIVATFICVIVIDAI 1099 (1178)
T ss_pred HHHHHhcCCCc----C-----ce------eEhHhhhhHHHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65554432111 1 00 1122333333333343 233455667655444443333222211 111111
Q ss_pred HHhcc-ccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 002172 810 AVYAN-WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSG 855 (956)
Q Consensus 810 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~ 855 (956)
+.... +.+. .....+.+|+.+++..++.++|+.++|++.|.+.|.
T Consensus 1100 ~~~~~~~~~~-~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~ 1145 (1178)
T PLN03190 1100 PTLPGYWAIF-HIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPC 1145 (1178)
T ss_pred ccchhHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 10001 1111 111235567777888888899999999999988874
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-94 Score=853.19 Aligned_cols=537 Identities=25% Similarity=0.330 Sum_probs=447.2
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhcCC----CC---CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-cEE
Q 002172 66 LGFMWNPLSWVMEAAAIMAIALANGG----GK---PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAP-KSK 137 (956)
Q Consensus 66 l~~~~~p~~~~l~~aails~~~~~~~----~~---~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~-~~~ 137 (956)
-.||+||+.++++++++++++++... +. ...|...+.+++.+++...++.++|+|+++++++|++..++ +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35789999999999999999886321 11 11233334444445566677789999999999999998775 799
Q ss_pred EEECCe-EEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCc---cccCCeeccCcEEE
Q 002172 138 VLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDS---VYSGSTCKQGEIEA 213 (956)
Q Consensus 138 V~RdG~-~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~---v~~Gs~v~~G~~~~ 213 (956)
|+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.||.|++|+. +|+||.|.+|++++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 9999999999999999999999999999999985 899999999999999999988 99999999999999
Q ss_pred EEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCc
Q 002172 214 VVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIA 292 (956)
Q Consensus 214 ~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~a 292 (956)
+|+++|.+|++||+.++++++ .+++|+|..++.+..++...+++.++...++.++ .+.. ..+..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999987 6678999877776554332222222111111111 1222 36777889999999999
Q ss_pred hhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccc
Q 002172 293 MPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV 372 (956)
Q Consensus 293 Lp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~ 372 (956)
++..++.+...|+.||+|+|+++|++.++|+||++|++|||||||||+|+|++.+.. .. .+.+.++++..++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999998753 22 356677777777777665
Q ss_pred cccChHHHHHHHhcCCh---HHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCc-hHHHHHHH
Q 002172 373 ENQDAIDAAIVGMLADP---KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVH 448 (956)
Q Consensus 373 ~~~~~i~~ai~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 448 (956)
.+ ||.+.+++.++... ......++..+++||++.++++++.+ +| ..+.||+||.+++.|... ...+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 44 68999998875431 11111244677899999988777643 34 468999999999999642 23456778
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 002172 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (956)
Q Consensus 449 ~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (956)
+.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999974 489999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002172 529 LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 529 lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
+|++ ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9994 3699999999999999999999999999999999999999999999
Q ss_pred eccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (956)
Q Consensus 609 mg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni 658 (956)
||+|||+||++||+||+||||++|++++++||++.-.--....|+++.-+
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999999998433344666665444
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-91 Score=808.90 Aligned_cols=651 Identities=23% Similarity=0.336 Sum_probs=498.5
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHH
Q 002172 25 EVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIV 104 (956)
Q Consensus 25 ~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii 104 (956)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..||+ +++.+..+.-|... .+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHH
Confidence 3444455557899999999999999999999999999999999999999 56665555444331 2444455566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeC-CCeeecceEEeecCCceeecc
Q 002172 105 TLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKL-GDIIPADARLLEGDPLKIDQS 183 (956)
Q Consensus 105 ~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~-Gd~VPaD~~ll~g~~l~VDeS 183 (956)
++.+.+...+.+|+++..+.++.+- .....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++|+++ ||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv-~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~ci-vNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMV-KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDCI-VNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcEE-eecc
Confidence 6667778889999999988887754 34568999999999999999999999999998 9999999999999975 9999
Q ss_pred ccCCcCeeeecCCC-------------------CccccCCeecc------CcEEEEEEEecchhHHHhHHHhhhcccccc
Q 002172 184 ALTGESLPVTKGPG-------------------DSVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQQG 238 (956)
Q Consensus 184 ~LTGES~pv~K~~g-------------------~~v~~Gs~v~~------G~~~~~V~~tG~~T~~gki~~l~~~~~~~~ 238 (956)
+|||||+||.|.+- +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.+ ++.
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-kP~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-KPV 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC-CCc
Confidence 99999999999873 46999999875 56999999999999999988776544 233
Q ss_pred hHHHHHHHH--HHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCccc
Q 002172 239 HFQKVLTAI--GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITK 316 (956)
Q Consensus 239 ~l~~~~~~i--~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk 316 (956)
+++-.-+.+ ..++.+ ++++.++..++.+...+.+....+..++.++...+|+|||+++++....+..||.|+||+|.
T Consensus 379 ~fkfyrds~~fi~~l~~-ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVI-IALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred ccHHHHHHHHHHHHHHH-HHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 344333333 222222 22222222233334456778888999999999999999999999999999999999999999
Q ss_pred ccchhhhhcCceEEeeccccceeeCceeEEeeeeeecc---C--------------------C-CCH-HHHHHHHHHhcc
Q 002172 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA---K--------------------G-VDA-DAVVLMAARASR 371 (956)
Q Consensus 317 ~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~---~--------------------~-~~~-~~~l~~aa~~~~ 371 (956)
+++.+...|++|++|||||||||++.+.+-.+.....+ . + ..+ ..+....+.|+.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999998654321000 0 0 001 122333334432
Q ss_pred c------cccChHHHHHHHhcC------------------------ChHH--------H-hhccceeEeecCCCCCcceE
Q 002172 372 V------ENQDAIDAAIVGMLA------------------------DPKE--------A-RANIQEVHFLPFNPTDKRTA 412 (956)
Q Consensus 372 ~------~~~~~i~~ai~~~~~------------------------~~~~--------~-~~~~~~l~~~pF~s~~kr~s 412 (956)
. -.+||+|..+.+..+ +|.+ . ...+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 2 135777655543211 0100 0 11467889999999999999
Q ss_pred EEEEcC-CCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCC--------CccCCCCCceE
Q 002172 413 LTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG--------RKESSGGPWQF 483 (956)
Q Consensus 413 v~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~--------~~~~~e~~l~~ 483 (956)
|++.++ +.+.+.|+|||||.|.+.|+. +.+++++++.++.|+.+|+|++|+|+|+++.. .++..|++|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999864 567899999999999999986 46788999999999999999999999999766 36788999999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc-----------------------
Q 002172 484 IGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA----------------------- 540 (956)
Q Consensus 484 lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~----------------------- 540 (956)
+|++.|++++|++++.+|++|++|+||++|+||||..||..+||+|||.........
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 999999999999999999999999999999999999999999999999653210000
Q ss_pred -ccC-Ccccc-------------------cc-----------CcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEE
Q 002172 541 -LLG-QNKDE-------------------SI-----------VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICG 588 (956)
Q Consensus 541 -l~g-~~~~~-------------------~~-----------~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~ 588 (956)
..+ .+.+. .+ ..+.+++++.+.+|||||+|+||.++|+.||+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 000 00000 00 11225667888999999999999999999999999999
Q ss_pred EEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 589 MTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668 (956)
Q Consensus 589 m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~ 668 (956)
|||||+|||.|||+|||||+++++. |.-||.+.---++.+++++.|++||+.+----....|...+.+...++.+++
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L- 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL- 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee-
Confidence 9999999999999999999998654 3447888887789999999999999986554444455444433322222211
Q ss_pred HhhhcCCChHHHHHHHHhhccc
Q 002172 669 LIWKFDFPPFMVLIIAILNDGT 690 (956)
Q Consensus 669 ~~~~~~~~p~~~l~i~~~~d~~ 690 (956)
..-+..+..+|.+++.++-..+
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~p 955 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITP 955 (1140)
T ss_pred eeecccccchhhhhhHHHHHHH
Confidence 1124567788888888776544
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-89 Score=812.14 Aligned_cols=542 Identities=24% Similarity=0.318 Sum_probs=450.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcC---CC---CCCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-E
Q 002172 67 GFMWNPLSWVMEAAAIMAIALANG---GG---KPPDWQDF---VGIVTLLLINSTISFIEENNAGNAAAALMASLAPK-S 136 (956)
Q Consensus 67 ~~~~~p~~~~l~~aails~~~~~~---~~---~~~~~~~~---~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~-~ 136 (956)
.||.||+.++++++++++++++.. .+ ....|++. +.+++.+++...++.++|+|+++++++|++..+++ +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999998541 11 11246654 33334456777888899999999999999888774 8
Q ss_pred EEEE-CCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCc---cccCCeeccCcEE
Q 002172 137 KVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDS---VYSGSTCKQGEIE 212 (956)
Q Consensus 137 ~V~R-dG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~---v~~Gs~v~~G~~~ 212 (956)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ ..||||+|||||.||.|++|+. +|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 999999999999999999999999999999999997 5899999999999999999974 9999999999999
Q ss_pred EEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCC
Q 002172 213 AVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPI 291 (956)
Q Consensus 213 ~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 291 (956)
++|+++|.+|++||+.++++++ .+++|+|..++.+..++.+.+.+.++. +..+..+. .....+..++++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 567999988777665533222211111 11111111 1123466678899999999
Q ss_pred chhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcc
Q 002172 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASR 371 (956)
Q Consensus 292 aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~ 371 (956)
+++...+.+...|+.||+|+|+++|++.++|+||++|++|||||||||+|+|++.+.. +. .+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHhcC
Confidence 9888777777789999999999999999999999999999999999999999998754 22 35667778888777765
Q ss_pred ccccChHHHHHHHhcCChHH--HhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCc-hHHHHHHH
Q 002172 372 VENQDAIDAAIVGMLADPKE--ARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVH 448 (956)
Q Consensus 372 ~~~~~~i~~ai~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 448 (956)
. .+||.+.+++.++.+... ....++..++.||++.++++++.+. +| ..+.||+||.+++.|... ...+.+++
T Consensus 341 ~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 A-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred C-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 5 457999999877542111 0112334678999999877765433 45 468899999999888532 22345677
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 002172 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (956)
Q Consensus 449 ~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (956)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+||||..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999753 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002172 529 LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 529 lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
+|+. ++|||++||||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9994 3699999999999999999999999999999999999999999999
Q ss_pred eccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663 (956)
Q Consensus 609 mg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~ 663 (956)
|++|+|+|+++||++++||||++|++++++||+++-+....+.|+++..++-.+.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 9999999999999999999999999999999999999999999998877765443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-86 Score=782.74 Aligned_cols=504 Identities=28% Similarity=0.410 Sum_probs=431.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE-CCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecC
Q 002172 98 QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD 176 (956)
Q Consensus 98 ~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~R-dG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~ 176 (956)
.+.+.+++++++.-.++.+-..|+.+++++|+++.|+++++++ ||++++||.++|+|||+|.++|||+||+||++++|+
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~ 254 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS 254 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc
Confidence 5666777777788788888888889999999999999997777 566999999999999999999999999999999999
Q ss_pred CceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHH
Q 002172 177 PLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSI 255 (956)
Q Consensus 177 ~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i 255 (956)
+ .||||+|||||.||.|.+||.||+||.+.+|..+..|+++|.+|.+++|.++++++ .+++|.|+..++++.++...+
T Consensus 255 s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~v 333 (713)
T COG2217 255 S-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333 (713)
T ss_pred E-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHH
Confidence 8 79999999999999999999999999999999999999999999999999999998 788999999999998877644
Q ss_pred HHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccc
Q 002172 256 AVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335 (956)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKT 335 (956)
++..++.+++++.....+|..++..++++|+.+|||+|.+++|+++..|..+.+++|+++|+..++|.++++|+++||||
T Consensus 334 l~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 334 LVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 44444444433333335788899999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEE
Q 002172 336 GTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTY 415 (956)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 415 (956)
||||+|+++|.++. ... + ++++++.+++..+... +||+..||+.++.+.. ....+..+.+| ...-.+
T Consensus 414 GTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~S-~HPiA~AIv~~a~~~~--~~~~~~~~~i~---G~Gv~~--- 480 (713)
T COG2217 414 GTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQHS-EHPLAKAIVKAAAERG--LPDVEDFEEIP---GRGVEA--- 480 (713)
T ss_pred CCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhcC-CChHHHHHHHHHHhcC--CCCccceeeec---cCcEEE---
Confidence 99999999998854 332 3 7788888888776554 5799999998654321 11112222333 111111
Q ss_pred EcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCc
Q 002172 416 IDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495 (956)
Q Consensus 416 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~ 495 (956)
..+|+ .+..|+++.+.+.-.. ... ..+..+.+.++|..++.++... +++|+++++|++||
T Consensus 481 -~v~g~--~v~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~ 540 (713)
T COG2217 481 -EVDGE--RVLVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRP 540 (713)
T ss_pred -EECCE--EEEEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCCh
Confidence 12564 4456999887653211 111 4556778889999999999865 89999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHH
Q 002172 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYE 575 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~ 575 (956)
|++++|++||+.|+++.|+||||..+|.++|+++||. +++|.+.||||.+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~~ 590 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKAE 590 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHHH
Confidence 9999999999999999999999999999999999994 4699999999999
Q ss_pred HHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (956)
Q Consensus 576 iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~ 655 (956)
+|+.||++|++|+|+|||+||+|||++||||||||+|||+|+++||++|++++++.++.+++.+|+++++||+|+.|++.
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002172 656 ITIRIVLGFM 665 (956)
Q Consensus 656 ~ni~~vl~~~ 665 (956)
+|...+....
T Consensus 671 yn~~~iplA~ 680 (713)
T COG2217 671 YNAIAIPLAA 680 (713)
T ss_pred HHHHHHHHHH
Confidence 9987655433
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-80 Score=758.76 Aligned_cols=499 Identities=26% Similarity=0.361 Sum_probs=433.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeec
Q 002172 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (956)
Q Consensus 96 ~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g 175 (956)
.|.+++.++++++++..++.++++|+++.+++|+++.+++++|+|||++++|++++|+|||+|.+++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHH
Q 002172 176 DPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (956)
Q Consensus 176 ~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 254 (956)
+. .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ .+++|+|+.+++++.++...
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 66899999999999887655
Q ss_pred HHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeecc
Q 002172 255 IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334 (956)
Q Consensus 255 i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DK 334 (956)
+++..++.+++++...+.+|..++...+++++++|||+|.++.|+++..+..+++|+|+++|+..++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 44444433333333445567778899999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEE
Q 002172 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALT 414 (956)
Q Consensus 335 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 414 (956)
|||||+|+|+|.+.. .+ .+.++++++.+++..+. ...||++.|+++++.+. +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e~-~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIH--PA-TGISESELLALAAAVEQ-GSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 999999999998754 22 24667777777765543 45689999998875321 11 24666665554321
Q ss_pred -EE-cCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCC
Q 002172 415 -YI-DSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDP 492 (956)
Q Consensus 415 -~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~ 492 (956)
+. ..+|+.+. .|+|+.+.+. .+.+.+.++++..+|+|++++|++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~~~--ig~~~~~~~~-------~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGERVL--ICAPGKLPPL-------ADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEEEE--Eecchhhhhc-------cHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 21 23565443 5899887541 1234455678899999999999854 89999999999
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhh
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 572 (956)
+|||++++|++|++.|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 257789999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002172 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (956)
Q Consensus 573 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~ 652 (956)
|.++|+.||+. +.|+|+|||+||+|||++|||||+||+|+|+++++||++++++++..++.++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 68999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002172 653 AVSITIRIVL 662 (956)
Q Consensus 653 ~~~~ni~~vl 662 (956)
++.+|+..+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-83 Score=781.35 Aligned_cols=798 Identities=17% Similarity=0.208 Sum_probs=583.6
Q ss_pred HHHhcCCCccCcccccHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 002172 45 RLTIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120 (956)
Q Consensus 45 r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~ 120 (956)
+...|-.|.+...|++.+ +.+++||.++.+.++++.+++++++ .. +...|...+++++++.++++.+.+|+++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 455999999999998865 5789999999999999999999987 32 3346777788888899999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEECCe-EEEEeccCcCCCcEEEEeCCCeeecceEEeecCC----ceeeccccCCcCeeeecC
Q 002172 121 AGNAAAALMASLAPKSKVLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKG 195 (956)
Q Consensus 121 a~~~~~~l~~~~~~~~~V~RdG~-~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~----l~VDeS~LTGES~pv~K~ 195 (956)
+++.....+ ..++.|.|++. +++..|++|++||+|.+..++.+|||.+|++++. |+|++++|+||++.+.|.
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999887654 46889999644 8999999999999999999999999999997652 689999999999988774
Q ss_pred C-----------------------------------------------CCccccCCeeccCc-EEEEEEEecchhHHHhH
Q 002172 196 P-----------------------------------------------GDSVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (956)
Q Consensus 196 ~-----------------------------------------------g~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki 227 (956)
. .+++++|+++++++ ++++|+.||.+|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 13578899999987 89999999999987553
Q ss_pred HHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccc---c----------C-----ccchHHHHHHHHHhhc
Q 002172 228 AHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH---R----------K-----YRPGIDNLLVLLIGGI 289 (956)
Q Consensus 228 ~~l~~~~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~---~----------~-----~~~~~~~~l~llv~~i 289 (956)
... ...+++.+++.++.....+++.++..+++..+....... . + ....+..+++++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 322 336778889998887655444333332222222111100 0 0 0112345567788899
Q ss_pred CCchhHHHHHHHHHHHHHHH----------hCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCC-
Q 002172 290 PIAMPTVLSVTMAIGSHRLS----------LQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD- 358 (956)
Q Consensus 290 P~aLp~~~~v~~~~~~~~l~----------~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~- 358 (956)
|++|++.+.+...+++..+. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.|.....+..
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999998885443 2578999999999999999999999999999999999987642221110
Q ss_pred -------------------------------------------HHHHHHHHHHhccc-------------cccChHHHHH
Q 002172 359 -------------------------------------------ADAVVLMAARASRV-------------ENQDAIDAAI 382 (956)
Q Consensus 359 -------------------------------------------~~~~l~~aa~~~~~-------------~~~~~i~~ai 382 (956)
.....+..+.|+.. +.+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 01223344444321 1236778888
Q ss_pred HHhcCChH----------------HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhc-CchHHHH
Q 002172 383 VGMLADPK----------------EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIER 445 (956)
Q Consensus 383 ~~~~~~~~----------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 445 (956)
+..+++.+ .....|+.++.+||+|.||||||++++++|+..++||||+.+|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 87653211 013578999999999999999999999999999999999999999998 5556788
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeecCCCC-------------------------ccCCCCCceEEEEeccCCCCCccHHHH
Q 002172 446 RVHAIIDKFAERGLRSLAVAYQEVPDGR-------------------------KESSGGPWQFIGLMPLFDPPRHDSAET 500 (956)
Q Consensus 446 ~~~~~i~~~a~~G~RvlavA~~~l~~~~-------------------------~~~~e~~l~~lGli~~~D~lR~~~~~a 500 (956)
+..+++++||.+|+|+|++|||++++++ .+.+|++|+++|.+++||+++++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 8889999999999999999999998664 235799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc---------------------------------------
Q 002172 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL--------------------------------------- 541 (956)
Q Consensus 501 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l--------------------------------------- 541 (956)
|+.|++||||+||+|||+.+||.+||..|++..+......+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997653321111
Q ss_pred ------cCCccccccCcc---cHHHHhh--hcceEEeeChhhHHHHHHHHhh-CCCEEEEEcCCccChhhhccCCeeEEe
Q 002172 542 ------LGQNKDESIVAL---PVDELIE--KADGFAGVFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 542 ------~g~~~~~~~~~~---~~~~~~~--~~~vfar~~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
+|+.+...++.. .+-++.. +..+|||++|.||+.+|+..++ .+.+++++|||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111101111 1112222 2348999999999999999974 488999999999999999999999999
Q ss_pred c--cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCh----HHHHHH
Q 002172 610 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPP----FMVLII 683 (956)
Q Consensus 610 g--~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p----~~~l~i 683 (956)
+ +|.+|+. +||+.+.+..|.....+| |||+.|.|+.+++.|.+++|+.++++.+++.++.+|...+ +.+.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 6 6777776 999999998888777666 9999999999999999999999999999998888775544 344444
Q ss_pred HHh-hcccccccc-cCCCCCC------C------CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCccc
Q 002172 684 AIL-NDGTIMTIS-KDRVKPS------P------LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSS 749 (956)
Q Consensus 684 ~~~-~d~~~~~l~-~d~~~p~------~------~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 749 (956)
|++ +..+++.++ +|+..+. | ..+.....+.|+.+++.|++.+++.|++++..+... .....|.
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G~-- 974 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNGL-- 974 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheee-eeccCCC--
Confidence 443 444566665 4443221 1 112233456788899999999999988777766432 1111111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHHHHHHH--HHHhc----cccccccCch
Q 002172 750 LHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATL--IAVYA----NWSFAAIEGV 823 (956)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~ 823 (956)
.. ++..+.++++..+++..+.. ...-+++|.|+++-.+|+.+++.+......- .+... ..++......
T Consensus 975 ----~~-d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~ 1048 (1151)
T KOG0206|consen 975 ----TA-DYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLS 1048 (1151)
T ss_pred ----cC-ChhhccceEEEEEEEEEEee-eeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhc
Confidence 11 12233344333322222221 2223456766655555554444432211110 00000 0222233344
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHH
Q 002172 824 GWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLV 861 (956)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~ 861 (956)
...+|+++++..+++++|+.++|.+.+.++|...+...
T Consensus 1049 ~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~ 1086 (1151)
T KOG0206|consen 1049 SPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQ 1086 (1151)
T ss_pred CchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHH
Confidence 55688899999999999999999999999987665543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-81 Score=722.74 Aligned_cols=541 Identities=24% Similarity=0.344 Sum_probs=446.4
Q ss_pred CChhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCe-EEEEeccCcCCCcEEEEeCCCeeecceEE
Q 002172 95 PDWQDFVG-IVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARL 172 (956)
Q Consensus 95 ~~~~~~~~-ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~-~~~I~~~~LvpGDiV~l~~Gd~VPaD~~l 172 (956)
..+.|... ++.++.+...++.....++..++..|+++.|.++.++.+|+ +++||.+.|++||+|.++||++||+||++
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 44444433 33455566666666667777888999999999999999996 89999999999999999999999999999
Q ss_pred eecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHH
Q 002172 173 LEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFC 251 (956)
Q Consensus 173 l~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~ 251 (956)
++|++ +||||.+|||++||.|++|+.|.+||.+.+|.....++++|.||.+++|.++++++ ..++|+|+.+|+++.++
T Consensus 418 v~Gss-~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDGSS-EVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeCce-eechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 99998 89999999999999999999999999999999999999999999999999999998 67899999999999886
Q ss_pred HHHHHHHHHHHHHhHhhccc----------cCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchh
Q 002172 252 ICSIAVGMIVEIIVMYPIQH----------RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAI 321 (956)
Q Consensus 252 ~~~i~i~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~l 321 (956)
...+++..++.++++..+.. ..+..++..++++++.+|||+|.++.|++...|....+++|+++|..+++
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~L 576 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEAL 576 (951)
T ss_pred CchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHH
Confidence 54443333332222222211 23445677788899999999999999999999999999999999999999
Q ss_pred hhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEe
Q 002172 322 EEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHF 401 (956)
Q Consensus 322 E~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~ 401 (956)
|.+.++++++||||||||+|+++|.+.. ......+..+++.+++.. +....||+..|++.++.+..........+++
T Consensus 577 E~~hkv~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~-Es~SeHPig~AIv~yak~~~~~~~~~~~~~~ 653 (951)
T KOG0207|consen 577 EKAHKVKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAM-ESGSEHPIGKAIVDYAKEKLVEPNPEGVLSF 653 (951)
T ss_pred HHHhcCCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHH-hcCCcCchHHHHHHHHHhcccccCcccccee
Confidence 9999999999999999999999998854 444335566666555443 3445689999999997653311111112222
Q ss_pred ecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCc
Q 002172 402 LPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPW 481 (956)
Q Consensus 402 ~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l 481 (956)
..|..+.+...+. .+|+. ++-|.-+.+...-. ...++++..+++....|..+.+++...
T Consensus 654 ~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~------------- 712 (951)
T KOG0207|consen 654 EYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG------------- 712 (951)
T ss_pred ecccCCCcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-------------
Confidence 2333333221111 23443 56798888765322 223456777788889999999999976
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhh
Q 002172 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (956)
Q Consensus 482 ~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 561 (956)
+++|++.++|++|||+..+|+.||+.||++.|+||||..+|.++|+++|+.
T Consensus 713 ~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------------------- 763 (951)
T KOG0207|consen 713 QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------------------- 763 (951)
T ss_pred EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------------------
Confidence 999999999999999999999999999999999999999999999999963
Q ss_pred cceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHH
Q 002172 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641 (956)
Q Consensus 562 ~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~ 641 (956)
+|||.+.|+||.++|+.+|++|+.|+|+|||+||+|||.+|||||+||.|+|+|.++|||||+.+++..++.+|..+|+
T Consensus 764 -~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrk 842 (951)
T KOG0207|consen 764 -NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRK 842 (951)
T ss_pred -eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHhhccc
Q 002172 642 IFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGT 690 (956)
Q Consensus 642 ~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p~~~l~i~~~~d~~ 690 (956)
+++|+|.|+.|++.+|+..+....+.++.|++.++|++--....++...
T Consensus 843 t~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvs 891 (951)
T KOG0207|consen 843 TVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVS 891 (951)
T ss_pred HHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHH
Confidence 9999999999999999988777777777777888898776666666554
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-78 Score=716.95 Aligned_cols=474 Identities=36% Similarity=0.544 Sum_probs=413.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceee
Q 002172 104 VTLLLINSTISFIEENNAGNAAAALMA--SLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKID 181 (956)
Q Consensus 104 i~~~li~~~i~~~~e~~a~~~~~~l~~--~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VD 181 (956)
+++++++..++.+++++++++.+.|++ ..+++++|+||| +++|++++|+|||+|.+++||+|||||+|++|++ .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 346677889999999999999999998 778899999999 9999999999999999999999999999999975 799
Q ss_pred ccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHH-HHHHHHHHHHH
Q 002172 182 QSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIG-NFCICSIAVGM 259 (956)
Q Consensus 182 eS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~-~~~~~~i~i~~ 259 (956)
||+|||||.|+.|.+||.+|+||.+.+|+.++.|+.+|.+|..+++..++.+. ..++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877 44788899999987 44433332222
Q ss_pred HHHHHhHhhcccc--CccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccc
Q 002172 260 IVEIIVMYPIQHR--KYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (956)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGT 337 (956)
++.+++++..... +|...+..++++++.+|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 2222221111112 36678899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEEEc
Q 002172 338 LTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYID 417 (956)
Q Consensus 338 LT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~ 417 (956)
||+|+|+|.++.. .. + .....||++.|++.++.. +.++..||++..+++++++..
T Consensus 241 LT~~~~~v~~~~~--~~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSV--LG-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEe--cC-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 9999999988652 11 0 123568999999887642 123568999999999888765
Q ss_pred CCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccH
Q 002172 418 SEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDS 497 (956)
Q Consensus 418 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~ 497 (956)
.++ .++||+|+.+.+.|.. +.+.+++++++|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 2334556888999999999876 8999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHH
Q 002172 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIV 577 (956)
Q Consensus 498 ~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV 577 (956)
+++|+.|+++|++++|+|||++.+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 5889999999999
Q ss_pred HHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (956)
Q Consensus 578 ~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~n 657 (956)
+.+|+.|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|.+++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 788999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002172 658 IRIVLGFM 665 (956)
Q Consensus 658 i~~vl~~~ 665 (956)
+..++..+
T Consensus 475 ~~~~~~a~ 482 (499)
T TIGR01494 475 LILIPLAA 482 (499)
T ss_pred HHHHHHHH
Confidence 88655444
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-77 Score=705.75 Aligned_cols=498 Identities=29% Similarity=0.415 Sum_probs=423.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCC
Q 002172 76 VMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPG 155 (956)
Q Consensus 76 ~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpG 155 (956)
.+.++++++++.+ +|.++..|+++++++..+++++++|+.+.+++|++..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 3456677777763 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-
Q 002172 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (956)
Q Consensus 156 DiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (956)
|+|.+++||+|||||++++|+. .||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+||+.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 9999999999999999999986 79999999999999999999999999999999999999999999999999999876
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCc
Q 002172 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (956)
Q Consensus 235 ~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~il 314 (956)
.+++++|+.+++++.++...+++..++.+++.+... .+..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 578899999999988765544443333333333222 223377788999999999999999999999999999999999
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhh
Q 002172 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~ 394 (956)
+|+++++|++|++|++|||||||||+|+|+|.+.. +.+++.+++.. +..+.||++.|+++++.+.+
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~-e~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAA-EQASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHH-hccCCCcHHHHHHHHHHhcC----
Confidence 99999999999999999999999999999998753 12566666543 34556899999998764321
Q ss_pred ccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc
Q 002172 395 NIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK 474 (956)
Q Consensus 395 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~ 474 (956)
.....+..|. +.... ..+|+.+ ..|+++.+.+.. .+.+..+|.+++.++..
T Consensus 300 ~~~~~~~~~g----~gi~~---~~~g~~~--~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~------- 350 (536)
T TIGR01512 300 NVESVEEVPG----EGVRA---VVDGGEV--RIGNPRSLEAAV-------------GARPESAGKTIVHVARD------- 350 (536)
T ss_pred CCcceEEecC----CeEEE---EECCeEE--EEcCHHHHhhcC-------------CcchhhCCCeEEEEEEC-------
Confidence 1222222221 11111 1245543 458887653311 11456788888887754
Q ss_pred cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcc
Q 002172 475 ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVAL 553 (956)
Q Consensus 475 ~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 553 (956)
..++|.+.++|++|||++++|++|+++|+ ++.|+|||+..+|..+++++|+.
T Consensus 351 ------~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 351 ------GTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred ------CEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 38999999999999999999999999999 99999999999999999999984
Q ss_pred cHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCChhHH
Q 002172 554 PVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 632 (956)
Q Consensus 554 ~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~i 632 (956)
++|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| +|++.++++||+++++++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 247889999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 633 ISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662 (956)
Q Consensus 633 v~ai~~gR~~~~~i~~~i~~~~~~ni~~vl 662 (956)
.+++.+||++++|+++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999976444
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-76 Score=703.70 Aligned_cols=516 Identities=27% Similarity=0.383 Sum_probs=431.2
Q ss_pred HHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECC-eEEEEeccCcCCC
Q 002172 77 MEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDG-KWMEEDAAILVPG 155 (956)
Q Consensus 77 l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG-~~~~I~~~~LvpG 155 (956)
+.++++++++.+ .|.++..|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+||
T Consensus 5 ~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~G 77 (556)
T TIGR01525 5 MALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVG 77 (556)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 445556666653 78899999999999999999999999999999999999999999996 9999999999999
Q ss_pred cEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-
Q 002172 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (956)
Q Consensus 156 DiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (956)
|+|.+++||+|||||+|++|+. .||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.+++++.
T Consensus 78 Div~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 156 (556)
T TIGR01525 78 DIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQ 156 (556)
T ss_pred CEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHh
Confidence 9999999999999999999986 79999999999999999999999999999999999999999999999999999876
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCc
Q 002172 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (956)
Q Consensus 235 ~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~il 314 (956)
.+++++++.+++++.++...++++.++.+++++ ..... ..+..++++++++|||+||++++++++.+.++|+++|++
T Consensus 157 ~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~-~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gil 233 (556)
T TIGR01525 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVVWL-ALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233 (556)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCce
Confidence 678899999999988765544333333333322 22222 678889999999999999999999999999999999999
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCC--HHHHHHHHHHhccccccChHHHHHHHhcCChHHH
Q 002172 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD--ADAVVLMAARASRVENQDAIDAAIVGMLADPKEA 392 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~--~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~ 392 (956)
+|+++++|+||++|++|||||||||+|+|+|.+.. ... +.+ +++++.+++.++. ...||++.|++.++......
T Consensus 234 vk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~--~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 234 IKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE--PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred ecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE--ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998754 222 223 5667776665544 35689999999886432110
Q ss_pred hhccc-eeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCC
Q 002172 393 RANIQ-EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD 471 (956)
Q Consensus 393 ~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~ 471 (956)
... + ...++| .+..... .+|. ..+..|+++.+ + .... + ..+.+..++.++++|+|+++++...
T Consensus 310 ~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~~~-~-~~~~~~~~~~~~~~g~~~~~v~~~~--- 373 (556)
T TIGR01525 310 LPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LAAE-P-ISASPDLLNEGESQGKTVVFVAVDG--- 373 (556)
T ss_pred ccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hcCC-C-chhhHHHHHHHhhCCcEEEEEEECC---
Confidence 000 1 111111 1111111 1341 24556888876 2 1111 1 1123455677889999999999753
Q ss_pred CCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCcccccc
Q 002172 472 GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESI 550 (956)
Q Consensus 472 ~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~ 550 (956)
+++|.+.++|++|||++++|++|++.| +++.|+|||+..++.++++++|+.
T Consensus 374 ----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------ 425 (556)
T TIGR01525 374 ----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------ 425 (556)
T ss_pred ----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------
Confidence 899999999999999999999999999 999999999999999999999983
Q ss_pred CcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChh
Q 002172 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 551 ~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~ 630 (956)
++|+++.|++|.++++.+|+.|+.|+|+|||.||+||+++|||||++|++++.++++||+++.+++++
T Consensus 426 ------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 426 ------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred ------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHH
Confidence 35889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663 (956)
Q Consensus 631 ~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~ 663 (956)
.++.++++||++++||++++.|++.+|+..+..
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999876543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-76 Score=699.51 Aligned_cols=506 Identities=27% Similarity=0.404 Sum_probs=420.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEC-CeEEEEeccCcCCCcEEEEeCCCeeecceEEee
Q 002172 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLE 174 (956)
Q Consensus 96 ~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd-G~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~ 174 (956)
+|.....++++++++..++.+.++|+++++++|++..|++++++|+ |++++|++++|+|||+|.+++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 3444455566667777888888889999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHH
Q 002172 175 GDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCIC 253 (956)
Q Consensus 175 g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~ 253 (956)
|++ .||||+|||||.|+.|++||.+|+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 997 79999999999999999999999999999999999999999999999999999887 6788999999999988655
Q ss_pred HHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeec
Q 002172 254 SIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSD 333 (956)
Q Consensus 254 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~D 333 (956)
.+++..++.+ +.|. .++..++++++++|||+|++++++++..+..+++++|+++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~~~-~~~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITF-VIWL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHH-HHHH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 4433333222 2221 4778899999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEE
Q 002172 334 KTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTAL 413 (956)
Q Consensus 334 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 413 (956)
||||||+|+|+|.+.. ... +.++++++.+++..+.. +.||++.|++.++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~--~~~-~~~~~~~l~~aa~~e~~-s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVH--VFG-DRDRTELLALAAALEAG-SEHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEe--cCC-CCCHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 9999999999998754 222 45667777777665543 458999999987643211001111222222 111111
Q ss_pred EEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCC
Q 002172 414 TYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPP 493 (956)
Q Consensus 414 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~l 493 (956)
. .+|+ .+..|+++.+.+... . ++++.++|.+++.++... +++|++.++|++
T Consensus 356 ~---~~g~--~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEGT--KIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECCE--EEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1 2453 456799988643211 1 112457899999888654 899999999999
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhH
Q 002172 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK 573 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K 573 (956)
|||++++|++|++.|+++.|+|||+..+|..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (956)
Q Consensus 574 ~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~ 653 (956)
.++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.++++..++.++++||+++++|++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCChH
Q 002172 654 VSITIRIVLGFMLLALIWKFDFPPF 678 (956)
Q Consensus 654 ~~~ni~~vl~~~~~~~~~~~~~~p~ 678 (956)
+.+|+..+...+...+.+++.++|.
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655554444445556653
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=720.28 Aligned_cols=528 Identities=24% Similarity=0.325 Sum_probs=434.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCC
Q 002172 98 QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP 177 (956)
Q Consensus 98 ~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~ 177 (956)
.....++++++++..++.+.+.|+.+++++|+++.|++++|+|||++++|+.++|+|||+|.+++||+|||||+|++|+.
T Consensus 287 ~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~ 366 (834)
T PRK10671 287 EASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA 366 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE
Confidence 33566777778888888888888999999999999999999999999999999999999999999999999999999985
Q ss_pred ceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHH
Q 002172 178 LKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIA 256 (956)
Q Consensus 178 l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~ 256 (956)
.||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+||+.+++++. .+++++|+..++++.+++..++
T Consensus 367 -~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~ 445 (834)
T PRK10671 367 -WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVV 445 (834)
T ss_pred -EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999887 6688999999999887654443
Q ss_pred HHHHHHHHhHhhcccc--CccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeecc
Q 002172 257 VGMIVEIIVMYPIQHR--KYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334 (956)
Q Consensus 257 i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DK 334 (956)
+..++.+++ |...+. .+...+..++++++++|||||++++|+++..+..+++++|+++|+.+++|+++++|++||||
T Consensus 446 ~~a~~~~~~-~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDK 524 (834)
T PRK10671 446 VIALVSAAI-WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDK 524 (834)
T ss_pred HHHHHHHHH-HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcC
Confidence 333322222 222222 23456677899999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEE
Q 002172 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALT 414 (956)
Q Consensus 335 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 414 (956)
|||||+|+|+|.+.. .. .+.++++++.+++..+. ...||++.|+++++.+. .... ..+|.....+ .+.
T Consensus 525 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~~--~~~~~~~~g~-Gv~ 592 (834)
T PRK10671 525 TGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLPQ--VNGFRTLRGL-GVS 592 (834)
T ss_pred CCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCCC--cccceEecce-EEE
Confidence 999999999998743 22 24567777777666544 34589999998765321 1111 1122222211 111
Q ss_pred EEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCC
Q 002172 415 YIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR 494 (956)
Q Consensus 415 ~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR 494 (956)
.. .+|+ .+.+|+++.+.+.... .+.+.+.+++++++|.+++.++++. +++|++.+.|++|
T Consensus 593 ~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r 652 (834)
T PRK10671 593 GE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLR 652 (834)
T ss_pred EE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcch
Confidence 11 2454 3467999977542211 2345566778889999999999865 7999999999999
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHH
Q 002172 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (956)
Q Consensus 495 ~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~ 574 (956)
||++++|++|++.|+++.|+|||+..+|..+++++|+. ++|+++.|++|.
T Consensus 653 ~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K~ 702 (834)
T PRK10671 653 SDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGKA 702 (834)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHHH
Confidence 99999999999999999999999999999999999984 368999999999
Q ss_pred HHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (956)
Q Consensus 575 ~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~ 654 (956)
++++.+|++|+.|+|+|||.||+|||++||+||+||+|+|.++++||+++++++++.|+.++++||++++||++++.|++
T Consensus 703 ~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~ 782 (834)
T PRK10671 703 EAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAF 782 (834)
T ss_pred HHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-hhcCCChHHHHHHHHhhcc
Q 002172 655 SITIRIVLGFMLLALI-WKFDFPPFMVLIIAILNDG 689 (956)
Q Consensus 655 ~~ni~~vl~~~~~~~~-~~~~~~p~~~l~i~~~~d~ 689 (956)
.+|+..+...++.+.. +++.++|+.-.+...+.+.
T Consensus 783 ~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~ 818 (834)
T PRK10671 783 IYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSI 818 (834)
T ss_pred HHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccce
Confidence 9998766544322211 2445777755444444443
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-74 Score=653.70 Aligned_cols=572 Identities=24% Similarity=0.293 Sum_probs=419.7
Q ss_pred CCHHHHHHHcCCCCCCCC-HHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhh
Q 002172 21 VPMEEVFETLRCNKEGLS-TEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQD 99 (956)
Q Consensus 21 ~~~~~~~~~l~~~~~GLt-~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~ 99 (956)
.|.++.+..++.+ +|++ .++++.-.++||.|+.+.+.++.-..|.+.-..|| +++.+..+.-|.+. ..|+.
T Consensus 148 fp~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 4566666665544 4665 34444444569999999988888888888888898 45555555556663 46777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeC---CCeeecceEEeecC
Q 002172 100 FVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKL---GDIIPADARLLEGD 176 (956)
Q Consensus 100 ~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~---Gd~VPaD~~ll~g~ 176 (956)
.+.-+++++..-.--..|..+.-+..+. |..-+....|.|+++|+.+.++||.|||+|.|.. ...||||.+|+.|+
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs 298 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS 298 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc
Confidence 7766666554433333444443332222 2333457899999999999999999999999987 56899999999999
Q ss_pred CceeeccccCCcCeeeecCC-----------------CCccccCCeecc-------------CcEEEEEEEecchhHHHh
Q 002172 177 PLKIDQSALTGESLPVTKGP-----------------GDSVYSGSTCKQ-------------GEIEAVVIATGVHTFFGK 226 (956)
Q Consensus 177 ~l~VDeS~LTGES~pv~K~~-----------------g~~v~~Gs~v~~-------------G~~~~~V~~tG~~T~~gk 226 (956)
+ -||||+|||||.|..|.+ ..++|.||.+++ |.+.+.|++||.+|..|+
T Consensus 299 c-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 299 C-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred e-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 8 599999999999999976 136999999874 669999999999999999
Q ss_pred HHHhhhc-ccccchHHHHHHHHHHHH-HHHHHHHHHHHHHhHhhccc----cCccchHHHHHHHHHhhcCCchhHHHHHH
Q 002172 227 AAHLVDS-TNQQGHFQKVLTAIGNFC-ICSIAVGMIVEIIVMYPIQH----RKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300 (956)
Q Consensus 227 i~~l~~~-~~~~~~l~~~~~~i~~~~-~~~i~i~~~~~~~~~~~~~~----~~~~~~~~~~l~llv~~iP~aLp~~~~v~ 300 (956)
+.+.+-- +++.+.-.+. .++ +..+.++.++.....|.-.. ++-...+..+..++...+|+.||+-++++
T Consensus 378 LvRtilf~aervTaNn~E-----tf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmA 452 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNRE-----TFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMA 452 (1160)
T ss_pred eeeeEEecceeeeeccHH-----HHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHH
Confidence 8775543 2333321111 111 11111111211111111111 11122344455667888999999999999
Q ss_pred HHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccC-------CCCHHHHHHHHHHhc--c
Q 002172 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK-------GVDADAVVLMAARAS--R 371 (956)
Q Consensus 301 ~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~-------~~~~~~~l~~aa~~~--~ 371 (956)
.-.+...|+|.+++|..+-.+.-.|++|+.|||||||||+..|.|..+--..... ....+.+..+|++.+ .
T Consensus 453 VNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~ 532 (1160)
T KOG0209|consen 453 VNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVL 532 (1160)
T ss_pred HHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998643100000 112223333443332 1
Q ss_pred c---cccChHHHHHHHhcCChHHH------h----hccceeEeecCCCCCcceEEEEEcC----CCcEEEEEeCcHHHHH
Q 002172 372 V---ENQDAIDAAIVGMLADPKEA------R----ANIQEVHFLPFNPTDKRTALTYIDS----EGKMHRVSKGAPEQIL 434 (956)
Q Consensus 372 ~---~~~~~i~~ai~~~~~~~~~~------~----~~~~~l~~~pF~s~~kr~sv~~~~~----~g~~~~~~KGa~e~il 434 (956)
. --+||+++|.+...+..-+. + ...++.+.+.|.|.-|||+++.... +-+++..+|||||.|.
T Consensus 533 le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~ 612 (1160)
T KOG0209|consen 533 LEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQ 612 (1160)
T ss_pred hcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHH
Confidence 2 24699999998876432111 1 1366788899999999999886532 2367788999999999
Q ss_pred HhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCC--------CCccCCCCCceEEEEeccCCCCCccHHHHHHHHHh
Q 002172 435 NLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD--------GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALN 506 (956)
Q Consensus 435 ~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~--------~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~ 506 (956)
++.. ++++++++...+|+++|.||||++||+++. -++|+.|++|+|.|++.|.-|+|+|++++|+.|++
T Consensus 613 ~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~ 689 (1160)
T KOG0209|consen 613 EMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNN 689 (1160)
T ss_pred HHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhc
Confidence 8876 457788888899999999999999999873 23678899999999999999999999999999999
Q ss_pred CCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc---------------------------------------cccCCccc
Q 002172 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS---------------------------------------ALLGQNKD 547 (956)
Q Consensus 507 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~---------------------------------------~l~g~~~~ 547 (956)
.+.+++||||||+.||.++|+++||..+..... +++|..++
T Consensus 690 SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~ 769 (1160)
T KOG0209|consen 690 SSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALD 769 (1160)
T ss_pred cCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHH
Confidence 999999999999999999999999965411100 11121111
Q ss_pred cccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002172 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 548 ~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
.......+.+++..+.||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+=
T Consensus 770 ~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 770 HLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred HHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 111122355667778899999999999999999999999999999999999999999999985
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-74 Score=636.62 Aligned_cols=768 Identities=21% Similarity=0.255 Sum_probs=515.1
Q ss_pred HHHHhcCCCccCcccccHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC-CChhhHHHHHHHHHHHHHHHHHHH
Q 002172 44 ERLTIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKP-PDWQDFVGIVTLLLINSTISFIEE 118 (956)
Q Consensus 44 ~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~~l~~aails~~~~~~~~~~-~~~~~~~~ii~~~li~~~i~~~~e 118 (956)
.++++|.||.+...|++.+ ..++.||+-+++.++++.++-+++.....|.. .+|...+.++.+.++-..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5667888999998887653 35667888888888888887777765444332 234444444444445455555555
Q ss_pred HHHHHHHHHHhhcCCCcEEE-EECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecC----CceeeccccCCcCeeee
Q 002172 119 NNAGNAAAALMASLAPKSKV-LRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD----PLKIDQSALTGESLPVT 193 (956)
Q Consensus 119 ~~a~~~~~~l~~~~~~~~~V-~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~----~l~VDeS~LTGES~pv~ 193 (956)
+++.+. ++ ..+.++ -|||-..+ +++++++||+|.++.+++||||.++++.+ .+.|-+-.|+||+.-+.
T Consensus 154 ~~rd~~---~N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRE---LN---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhh---hh---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 554443 22 233444 47776555 99999999999999999999999999533 25799999999996554
Q ss_pred cCC-----------------------------------------------CCccccCCeeccCcEEEEEEEecchhHHHh
Q 002172 194 KGP-----------------------------------------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (956)
Q Consensus 194 K~~-----------------------------------------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gk 226 (956)
|-| .|.++++|.+.+|.++|+|++||.+|..
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 422 3579999999999999999999999964
Q ss_pred HHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q 002172 227 AAHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (956)
Q Consensus 227 i~~l~~~~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~ 306 (956)
.++......+.+.++..+|.+.+.+.+.+.+..+ +++.....+.+|...+.+++.++...||++|-+-+.++...-++
T Consensus 305 vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~ 382 (1051)
T KOG0210|consen 305 VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSW 382 (1051)
T ss_pred HhccCCcccccceeeeecccHHHHHHHHHHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhh
Confidence 2222222255677888888888775544333222 22233344567888889999999999999999999999999888
Q ss_pred HHHh----CCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCH-----------------------
Q 002172 307 RLSL----QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDA----------------------- 359 (956)
Q Consensus 307 ~l~~----~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~----------------------- 359 (956)
.+.. .|..+|+.+.-|+||+++++.+|||||||+|+|.+++........+.+.
T Consensus 383 ~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~ 462 (1051)
T KOG0210|consen 383 QIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGAL 462 (1051)
T ss_pred hcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccc
Confidence 8876 3688999999999999999999999999999999998765432211110
Q ss_pred -----------HHHHHHHHHhcccc----c--------cChHHHHHHHhc-----------------CChHHHhhcccee
Q 002172 360 -----------DAVVLMAARASRVE----N--------QDAIDAAIVGML-----------------ADPKEARANIQEV 399 (956)
Q Consensus 360 -----------~~~l~~aa~~~~~~----~--------~~~i~~ai~~~~-----------------~~~~~~~~~~~~l 399 (956)
.+..+..+.|+... + .+|.+.|+++.- ..+......|+++
T Consensus 463 ~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL 542 (1051)
T KOG0210|consen 463 SRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQIL 542 (1051)
T ss_pred hhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEE
Confidence 01222233333221 1 134444443311 1111123478999
Q ss_pred EeecCCCCCcceEEEEEcC-CCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc----
Q 002172 400 HFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK---- 474 (956)
Q Consensus 400 ~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~---- 474 (956)
..+||+|+.|||.++++++ .|+...+.|||+-+|-.....+ +.+++....||++|+|+|.+|.|.+++++.
T Consensus 543 ~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe 618 (1051)
T KOG0210|consen 543 QVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFE 618 (1051)
T ss_pred EEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHH
Confidence 9999999999999999976 6889999999999988776654 345566778999999999999999986641
Q ss_pred ----------------------cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002172 475 ----------------------ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 475 ----------------------~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
...|.||+++|+.+.||++++|++.+++.||+|||+|||+|||+.+||+.||+..++.
T Consensus 619 ~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~ 698 (1051)
T KOG0210|consen 619 EAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLF 698 (1051)
T ss_pred HHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccce
Confidence 1368999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCC--------------------------ccccCCcccccc--CcccHHHHhhh--cceEEeeChhhHHHHHHHHhh
Q 002172 533 TNMYPS--------------------------SALLGQNKDESI--VALPVDELIEK--ADGFAGVFPEHKYEIVKRLQA 582 (956)
Q Consensus 533 ~~~~~~--------------------------~~l~g~~~~~~~--~~~~~~~~~~~--~~vfar~~Pe~K~~iV~~lq~ 582 (956)
.....- .++.|+.++-.+ -..|+-|+..+ +.|+|||+|+||+++++.+|+
T Consensus 699 sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~ 778 (1051)
T KOG0210|consen 699 SRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQK 778 (1051)
T ss_pred ecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHH
Confidence 532211 122222211100 11234444433 358999999999999999998
Q ss_pred C-CCEEEEEcCCccChhhhccCCeeEEe-c-cccHHHhhccceeecCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 002172 583 R-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITI 658 (956)
Q Consensus 583 ~-g~~V~m~GDGvNDapALk~AdVGIam-g-~gtd~Ak~aADivL~~~~~~~iv~ai~-~gR~~~~~i~~~i~~~~~~ni 658 (956)
+ |..|+.+|||-||+.|+++||+||++ | +|-+|+- |||+.+++ |+.+-+++. |||..|+|-.+...|.+-...
T Consensus 779 ~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL 855 (1051)
T KOG0210|consen 779 KTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGL 855 (1051)
T ss_pred hhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhH
Confidence 6 89999999999999999999999998 5 6666555 99999976 788877665 799999999988887765544
Q ss_pred HHHHHHHHHHHhhhcCCCh-------HHHHHHHHhhcccccccccCCCCCCC------------CCCccchHHHHHHHHH
Q 002172 659 RIVLGFMLLALIWKFDFPP-------FMVLIIAILNDGTIMTISKDRVKPSP------------LPDSWKLAEIFTTGVI 719 (956)
Q Consensus 659 ~~vl~~~~~~~~~~~~~~p-------~~~l~i~~~~d~~~~~l~~d~~~p~~------------~p~~~~~~~~~~~~~~ 719 (956)
.+..+..++... |.|.| +++.+..+.+-.+.+++-.|+.-.+. ...+....+-|..|++
T Consensus 856 ~Is~~Qavfs~v--~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvL 933 (1051)
T KOG0210|consen 856 IISTMQAVFSSV--FYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVL 933 (1051)
T ss_pred HHHHHHHHHHHH--hhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhh
Confidence 433333332221 22323 33445555555556677666642211 1111122344666677
Q ss_pred HHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHH
Q 002172 720 LGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAF 799 (956)
Q Consensus 720 ~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~ 799 (956)
+.+|++.+....+++.+.+.|+- . .++.|+..+....++...-.+.|. +.++++-
T Consensus 934 ISiYQG~vim~g~~~l~~~ef~~------------------i-vaisFtaLi~tELiMVaLtv~tw~------~~m~vae 988 (1051)
T KOG0210|consen 934 ISIYQGSVIMYGALLLFDTEFIH------------------I-VAISFTALILTELIMVALTVRTWH------WLMVVAE 988 (1051)
T ss_pred HHHHcccHHHHHHHHHhhhhheE------------------e-eeeeeHHHHHHHHHHHhhhhhhhh------HHHHHHH
Confidence 77777766655444444332210 0 011112222222222122223342 2233333
Q ss_pred HHHHHHH-HHHHHhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 002172 800 AVAQLIA-TLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKA 857 (956)
Q Consensus 800 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~ 857 (956)
.+++.+. ..+++...+ |..-...+|.++..+.++.++..+|..+.|++.|++-|+..
T Consensus 989 ~lsL~~Yivsl~~l~~y-fd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSY 1046 (1051)
T KOG0210|consen 989 LLSLALYIVSLAFLHEY-FDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSY 1046 (1051)
T ss_pred HHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcch
Confidence 3222111 111111110 11111234555555667778888899999999998887643
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-64 Score=545.64 Aligned_cols=520 Identities=27% Similarity=0.393 Sum_probs=402.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHh----cCCCCCCChhhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhc-CCCcEEE
Q 002172 68 FMWNPLSWVMEAAAIMAIALA----NGGGKPPDWQDFVGIVTLLLINST----ISFIEENNAGNAAAALMAS-LAPKSKV 138 (956)
Q Consensus 68 ~~~~p~~~~l~~aails~~~~----~~~~~~~~~~~~~~ii~~~li~~~----i~~~~e~~a~~~~~~l~~~-~~~~~~V 138 (956)
+.+||..++.++.++++.++. ..++....+.....|.+++.+..+ -+.+.|-|.+...+.|++. ....+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 456888777777777666332 222211233333333333333333 3445555544445555442 2235677
Q ss_pred EEC-CeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCC---CccccCCeeccCcEEEE
Q 002172 139 LRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEAV 214 (956)
Q Consensus 139 ~Rd-G~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g---~~v~~Gs~v~~G~~~~~ 214 (956)
+++ |.++.+++.+|+.||+|.++.||+||+||-++||.+ +||||++||||-||-|++| +.|-.||.+.+..++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 899999999999999999999999999999999998 8999999999999999998 67999999999999999
Q ss_pred EEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc--CccchHHHHHHHHHhhcCC
Q 002172 215 VIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHR--KYRPGIDNLLVLLIGGIPI 291 (956)
Q Consensus 215 V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~ 291 (956)
+++.-.+|++-|+..+++.+ .+++|-+--++-+..-+. .+++ +...-+|++..+ .-...+..+++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT-liFL---~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT-LIFL---LAVATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH-HHHH---HHHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 99999999999999999987 566775554443321110 1111 111111211111 1123466778999999999
Q ss_pred chhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcc
Q 002172 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASR 371 (956)
Q Consensus 292 aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~ 371 (956)
...--++..--.|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+=.-.+.. + .++.+.+++...|..+|-
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~--p-~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI--P-VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee--c-CCCCCHHHHHHHHHHhhh
Confidence 9888888777789999999999999999999999999999999999999875444322 2 247888888777777665
Q ss_pred ccccChHHHHHHHhcCChH-HHh-hccc-eeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCch-HHHHHH
Q 002172 372 VENQDAIDAAIVGMLADPK-EAR-ANIQ-EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRV 447 (956)
Q Consensus 372 ~~~~~~i~~ai~~~~~~~~-~~~-~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 447 (956)
... .|...+++..+.+.. +.+ .... ..+++||+.+.+++.+-. ++| ..+-|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 433 466666666543221 111 1111 357899998877666543 233 4567999999999876433 367788
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHH
Q 002172 448 HAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (956)
Q Consensus 448 ~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~ 527 (956)
++..++-++.|-..|+++... +++|.+.+.|-+||+.+|-+.+||++||+.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 899999999999999999765 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE
Q 002172 528 RLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 528 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+.|++ +..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVD------------------------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVD------------------------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCch------------------------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 99985 247999999999999999999999999999999999999999999
Q ss_pred EeccccHHHhhccceeecCCChhHHHHHHHHHHHHH
Q 002172 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643 (956)
Q Consensus 608 amg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~ 643 (956)
||.+||++||||+.+|=+|.|...+++.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=314.66 Aligned_cols=219 Identities=36% Similarity=0.537 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-EEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEee-cCCcee
Q 002172 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPK-SKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKI 180 (956)
Q Consensus 103 ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~-~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~-g~~l~V 180 (956)
|+++++++..+++++++++++..+++++..+++ ++|+|||++++++++||+|||+|.|++||++||||+|++ |+ +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 567778889999999999999999999888887 999999999999999999999999999999999999999 66 589
Q ss_pred eccccCCcCeeeecC-----CCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHH
Q 002172 181 DQSALTGESLPVTKG-----PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (956)
Q Consensus 181 DeS~LTGES~pv~K~-----~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 254 (956)
|||.||||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|+.|++.+.+... .+++++++.++++..+++..
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999998776 44689999999998876554
Q ss_pred HHHHHHHHHHhHhhc--cccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhh
Q 002172 255 IAVGMIVEIIVMYPI--QHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEE 323 (956)
Q Consensus 255 i~i~~~~~~~~~~~~--~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~ 323 (956)
++++.++.+ +.+.. ...++...+..++.+++.+||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVF-IIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHH-HHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhh-ccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 443333333 22333 456788889999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=242.64 Aligned_cols=211 Identities=33% Similarity=0.441 Sum_probs=150.0
Q ss_pred ceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCC
Q 002172 327 MDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNP 406 (956)
Q Consensus 327 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s 406 (956)
|++||||||||||+|+|.+. . .....++..+... .....+|++.++.......... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v~-----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA-----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE-----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEEE-----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hh-----hhhhee
Confidence 68999999999999999981 1 3445555555433 3344579999988775432211 11 111111
Q ss_pred CCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEE
Q 002172 407 TDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGL 486 (956)
Q Consensus 407 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGl 486 (956)
...+...... ++. +. |+++.+.+..... ... .........+|...+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--ISP--DLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HHH--HHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--ccc--chhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1122211111 122 22 8888887655431 111 1111223455555666654 3589999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002172 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
+.+.|+||||++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 13799
Q ss_pred ee--ChhhH--HHHHHHHhhCCCEEEEEcCCccChhhhccCC
Q 002172 567 GV--FPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (956)
Q Consensus 567 r~--~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad 604 (956)
++ +|++| .++++.||.+++.|+|+|||+||++|+|+||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999987789999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-15 Score=138.34 Aligned_cols=123 Identities=26% Similarity=0.395 Sum_probs=108.3
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhh
Q 002172 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (956)
Q Consensus 482 ~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 561 (956)
...+.++---++=++++++|++|++. ++|++.|||...+-...|+-+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56788888889999999999999999 99999999999999999999998632
Q ss_pred cceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe-c--cccHHHhhccceeecCCChhHHHHH
Q 002172 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 562 ~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-g--~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
++||...|+.|.++++.|++.+++|.|+|||+||.+||++||+||.. + +.++-+.++||+|+-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999986 4 4567778999999954 4444443
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.9e-13 Score=114.56 Aligned_cols=67 Identities=36% Similarity=0.496 Sum_probs=60.9
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCc-ccccHHHHHHHHHHhhHHHHHHHHHHHH
Q 002172 18 LENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEE-KQESKILKFLGFMWNPLSWVMEAAAIMA 84 (956)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~-~~~~~~~~~l~~~~~p~~~~l~~aails 84 (956)
||+++.+++++.|+++ .+|||++||++|+++||+|++++ ++++.|..|+++|.+|++++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999966 78999999999999999999965 4578889999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-08 Score=114.69 Aligned_cols=208 Identities=17% Similarity=0.195 Sum_probs=143.8
Q ss_pred ceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCc---------------
Q 002172 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQN--------------- 545 (956)
Q Consensus 481 l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~--------------- 545 (956)
-.|.|++....++|++....|+.|-++-|+.+-.+-.+....+-.|.++||.........+...+
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 47999999999999999999999999999999999999999999999999965322111111000
Q ss_pred ----------------------cccc-----------c--------CcccHHH-----------------HhhhcceEEe
Q 002172 546 ----------------------KDES-----------I--------VALPVDE-----------------LIEKADGFAG 567 (956)
Q Consensus 546 ----------------------~~~~-----------~--------~~~~~~~-----------------~~~~~~vfar 567 (956)
++.. + ++.+..+ +-.-+..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0000 0 0000111 0011126899
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccCh--hhhccCCeeEEecc-------------ccHHHh-hcc-----------
Q 002172 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDA--PALKKADIGIAVAD-------------ATDAAR-SAS----------- 620 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDa--pALk~AdVGIamg~-------------gtd~Ak-~aA----------- 620 (956)
++|+.-.++++.+|++|++|+.+|.-.|-. --.-+|||+||+.. ++.... +|.
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 999999999999999999999999998843 34577999999852 111111 122
Q ss_pred ------ceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhcCCChHHHHHHHHhhc
Q 002172 621 ------DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKFDFPPFMVLIIAILND 688 (956)
Q Consensus 621 ------DivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~-~~~~~~~~p~~~l~i~~~~d 688 (956)
|+-+-...+-.|..+|+-+|....-+|+...|.+......++..++.. ++.+..|+.-+++|...+--
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 333333345567888889999999999999999988877666555543 34456666667777776643
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.1e-10 Score=96.74 Aligned_cols=59 Identities=39% Similarity=0.612 Sum_probs=53.5
Q ss_pred HcCCCCC-CCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 002172 29 TLRCNKE-GLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIAL 87 (956)
Q Consensus 29 ~l~~~~~-GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~ 87 (956)
+|+++.+ |||++|+++|+++||+|++++++ .+.|..|+++|++|+.++|++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4677755 99999999999999999998876 78889999999999999999999999876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-09 Score=110.17 Aligned_cols=167 Identities=16% Similarity=0.202 Sum_probs=102.3
Q ss_pred hcCCChHHHHHHHHhhccc-ccccccCCCCC------CCCCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCc
Q 002172 672 KFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPR 743 (956)
Q Consensus 672 ~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~p------~~~p~~-~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~ 743 (956)
|.|++|+|++|+|+++|.+ .+++++|+.++ |++++. ...++.+...+..|+++++++++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999988 68998887632 332333 3345677777899999999999888776641
Q ss_pred ccCcccCCCCchhhHHHHHHHHHHHHHHHHHH-HHHHHhcCCCcccc--C--hhHHHHHHHHHHHHHHHHHHHhcc--cc
Q 002172 744 TFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD--R--PGLLLVLAFAVAQLIATLIAVYAN--WS 816 (956)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~--~~ 816 (956)
+|......+.. . ...++++|...+.+|. ..+++|+++.+.+. + .|.+++.+++++.++. ++..|.+ -.
T Consensus 76 -~~~~~~~~~~~--~-~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~i~~~P~~~~ 150 (182)
T PF00689_consen 76 -FGWDEETNNDN--L-AQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQ-ILIVYVPGLNR 150 (182)
T ss_dssp -TCSSSHHHTTC--H-HHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHH-HHHHHSTTHHH
T ss_pred -cccccccchhH--H-HHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHH-HHHhcchhhHh
Confidence 11110000000 1 2345556666667776 57899996654433 2 3556665555444333 3334433 12
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 817 FAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (956)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 848 (956)
++++.+.++..|+.+++++++.++..|++|++
T Consensus 151 ~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34566777777788899999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.8e-09 Score=111.37 Aligned_cols=131 Identities=15% Similarity=0.149 Sum_probs=97.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.........+.+. ..+.+ .--..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 68999999999999975 99999999999999999999995321110111000 00000 0114578
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~g 639 (956)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998766666655555444 4577777777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.8e-09 Score=114.88 Aligned_cols=130 Identities=20% Similarity=0.287 Sum_probs=98.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE-eeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA-GVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa-r~~P 570 (956)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+...+. +..+.. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~----dg~ltg----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIM----DGKLTG----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEE----CCEEEe----------EecCccCCc
Confidence 689999999999999999999999999888889999999853110000000 000000 0000 0234
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002172 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||| ++.+..++.||.++...++..++..+
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 6788888887654 3 5799999999999999999999999 88899999999999998998888765
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.85 E-value=9e-09 Score=109.05 Aligned_cols=129 Identities=22% Similarity=0.284 Sum_probs=93.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe-eCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar-~~P 570 (956)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- +....... +..... .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 6899999999999999999999999999999999999998531 11000000 000000 00011 123
Q ss_pred hhHHHHHHHHhhCC----CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHH
Q 002172 571 EHKYEIVKRLQARK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 571 e~K~~iV~~lq~~g----~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
..|.++++.+.++. ..|.|+||+.||.+|+++|+++++++ +.+..+++||++|.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665443 35889999999999999999999985 567888899999999999887653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.3e-08 Score=97.93 Aligned_cols=100 Identities=19% Similarity=0.269 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe--eChhhHHHH
Q 002172 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--VFPEHKYEI 576 (956)
Q Consensus 499 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar--~~Pe~K~~i 576 (956)
.+|+.|++.|+++.++|+.+...+....+.+|+..- |.. -.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 579999999999999999999999999999998521 111 124444555
Q ss_pred HHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC
Q 002172 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (956)
Q Consensus 577 V~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~ 628 (956)
++.++-....|+|+||+.||.+|++.|++++||+++.+..++.||+|...++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 5555444457999999999999999999999999999999999999886544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-07 Score=101.34 Aligned_cols=148 Identities=24% Similarity=0.283 Sum_probs=101.1
Q ss_pred CCC-CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccc-c---CCc-----cc----------
Q 002172 490 FDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-L---GQN-----KD---------- 547 (956)
Q Consensus 490 ~D~-lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~---g~~-----~~---------- 547 (956)
.|. +.+.+.++|+++++.|+++++.||.....+..+.+.+|+..... ....+ . +.. .+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 444 67899999999999999999999999999999999999853110 00000 0 000 00
Q ss_pred --------------cc--------cCc---ccHHHHhhhcc---------eEEeeChhh--HHHHHHHHhhC----CCEE
Q 002172 548 --------------ES--------IVA---LPVDELIEKAD---------GFAGVFPEH--KYEIVKRLQAR----KHIC 587 (956)
Q Consensus 548 --------------~~--------~~~---~~~~~~~~~~~---------vfar~~Pe~--K~~iV~~lq~~----g~~V 587 (956)
.. ... .++.+.+++.. .+..+.|.. |..-++.+.+. ...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~ 176 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEV 176 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 00 000 01112222111 112344433 77766666543 2358
Q ss_pred EEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 588 GMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 588 ~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.++||+.||.+|++.|++|+||+++.+..|++||+|..+++=..+..+++
T Consensus 177 i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 177 AAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred EEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999999999999999999998877778877764
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.7e-08 Score=89.15 Aligned_cols=65 Identities=29% Similarity=0.412 Sum_probs=52.9
Q ss_pred ccChHHHHHHHhcCC------hHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC
Q 002172 374 NQDAIDAAIVGMLAD------PKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN 439 (956)
Q Consensus 374 ~~~~i~~ai~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 439 (956)
.++|.|.|++.++.. ....+..+++++.+||||++|||+++++ .++...+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 457888888776532 3456778999999999999999999998 3345677999999999999974
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-07 Score=95.21 Aligned_cols=109 Identities=25% Similarity=0.340 Sum_probs=82.7
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHH
Q 002172 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 579 (956)
+|++|++.|+++.++||+....+..+.+++|+..- +.+ ..-.|+-..++.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------~~~----------------------~~~k~~~~~~~~~~ 87 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------YQG----------------------QSNKLIAFSDILEK 87 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------Eec----------------------ccchHHHHHHHHHH
Confidence 89999999999999999999999999999998521 100 01113333333333
Q ss_pred HhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHH
Q 002172 580 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAV 636 (956)
Q Consensus 580 lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai 636 (956)
+.-....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+. |..+.+.+
T Consensus 88 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 88 LALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 3333457999999999999999999999999988999999999997654 55554444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.65 E-value=8e-08 Score=101.58 Aligned_cols=144 Identities=20% Similarity=0.264 Sum_probs=97.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccccCC-c-------cccc------------
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSALLGQ-N-------KDES------------ 549 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~-~-------~~~~------------ 549 (956)
++-+++.++|++|++.|+++.+.||.....+..+++.+++..... ....+... . .+..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488899999999999999999999999999999999999853111 00000000 0 0000
Q ss_pred --c-------------Cc---ccHHHHhhhcc--e-----EEeeCh--hhHHHHHHHHhhC-C---CEEEEEcCCccChh
Q 002172 550 --I-------------VA---LPVDELIEKAD--G-----FAGVFP--EHKYEIVKRLQAR-K---HICGMTGDGVNDAP 598 (956)
Q Consensus 550 --~-------------~~---~~~~~~~~~~~--v-----far~~P--e~K~~iV~~lq~~-g---~~V~m~GDGvNDap 598 (956)
. .. ..+.+.+.+.. + +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 00 01111222211 1 122333 4788888777653 3 34899999999999
Q ss_pred hhccCCeeEEeccccHHHhhccceeecCCChhHHHHH
Q 002172 599 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 599 ALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
|++.|++|+||++|.+.+|+.||+|..+++-..+.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999976665555543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-07 Score=98.96 Aligned_cols=119 Identities=20% Similarity=0.191 Sum_probs=85.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe-eC
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VF 569 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar-~~ 569 (956)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+.....+ .+...+ ..+. -.+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~d--G~lt----------G~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDD--GKLT----------GRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeC--CEEe----------ceeeeeecC
Confidence 58999999999999999999999999999999999999999643211 110000 0000 023333 34
Q ss_pred hhhHHHHHHHHhh-CCC---EEEEEcCCccChhhhccCCeeEEeccccHHHhhccceee
Q 002172 570 PEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624 (956)
Q Consensus 570 Pe~K~~iV~~lq~-~g~---~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL 624 (956)
.+.|.+.++.+.+ .|. .+.++|||.||.|||+.|+.+|++.......+ .|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~-~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRA-LADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHH-HHHHhc
Confidence 4789988866655 354 48899999999999999999999985443333 444433
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.2e-07 Score=100.50 Aligned_cols=53 Identities=19% Similarity=0.219 Sum_probs=48.2
Q ss_pred CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 585 ~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++=..+..+++
T Consensus 213 ~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 213 EEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 34899999999999999999999999999999999999998887778877774
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.5e-07 Score=98.32 Aligned_cols=154 Identities=21% Similarity=0.226 Sum_probs=105.9
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC---------CCccccCCcccc------
Q 002172 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY---------PSSALLGQNKDE------ 548 (956)
Q Consensus 485 Gli~~~D~-lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---------~~~~l~g~~~~~------ 548 (956)
|.+.-.|. +.+.++++|+++++.|+++.+.||.....+..+.+++|+..... ....+.....+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 34444444 89999999999999999999999999999999999999864100 000000000000
Q ss_pred -----------------------------------------------ccC----------cccHHHHh---hh-----cc
Q 002172 549 -----------------------------------------------SIV----------ALPVDELI---EK-----AD 563 (956)
Q Consensus 549 -----------------------------------------------~~~----------~~~~~~~~---~~-----~~ 563 (956)
... ....+++. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00111111 11 11
Q ss_pred eE-------EeeCh--hhHHHHHHHHhh-CCCE---EEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChh
Q 002172 564 GF-------AGVFP--EHKYEIVKRLQA-RKHI---CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 564 vf-------ar~~P--e~K~~iV~~lq~-~g~~---V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~ 630 (956)
.+ -.+.| .+|..-++.+.+ .|-. |+++||+.||.+||+.|+.||||++|++.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 23333 368877777766 3543 99999999999999999999999999999999999888888888
Q ss_pred HHHHHHHH
Q 002172 631 VIISAVLT 638 (956)
Q Consensus 631 ~iv~ai~~ 638 (956)
.+..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 88888753
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=6e-07 Score=94.02 Aligned_cols=127 Identities=20% Similarity=0.230 Sum_probs=91.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++++.++.|++. +++.++|+-....+..+.+++|+..- +. ..+...+ +..... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~-~~~~~~~-~~~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FC-HSLEVDE-DGMITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hc-ceEEECC-CCeEEC------------ccccccc
Confidence 5689999999999999 99999999999999999999998521 11 1110000 000000 0012378
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccce-eecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi-vL~~~~~~~iv~ai 636 (956)
.|...++.++..+..+.|+|||.||.+|.++|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999887554444455665 44 4566665444
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.9e-07 Score=94.94 Aligned_cols=140 Identities=22% Similarity=0.277 Sum_probs=95.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCc-cccCC--------cccc------------
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALLGQ--------NKDE------------ 548 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~-~l~g~--------~~~~------------ 548 (956)
.+.+.+.++|+++++.|+++++.||.+...+..+.+.+|+..... ... +.... ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999642110 000 00000 0000
Q ss_pred -------cc-------------CcccHHHHhhhcc---------eEEeeCh--hhHHHHHHHHhhC-C---CEEEEEcCC
Q 002172 549 -------SI-------------VALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQAR-K---HICGMTGDG 593 (956)
Q Consensus 549 -------~~-------------~~~~~~~~~~~~~---------vfar~~P--e~K~~iV~~lq~~-g---~~V~m~GDG 593 (956)
.. ......++++... .+..+.| ..|..-++.+.++ | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0001111222111 1223334 3687777776553 3 468999999
Q ss_pred ccChhhhccCCeeEEeccccHHHhhccceeecCCChhH
Q 002172 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (956)
Q Consensus 594 vNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~ 631 (956)
.||.+|++.|++|+||+++.+..|+.||.|..+++-..
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCc
Confidence 99999999999999999999999999999987766666
|
catalyze the same reaction as SPP. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.8e-06 Score=94.75 Aligned_cols=65 Identities=18% Similarity=0.181 Sum_probs=52.8
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccce--eecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi--vL~~~~~~~iv~ai 636 (956)
.|..-++.|.+. | ..|+++|||-||.+||+.|+.||||++|.+.+|++||. |..+++-..+..++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 366666666443 2 35899999999999999999999999999999999996 66677777777766
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=8e-07 Score=91.53 Aligned_cols=110 Identities=25% Similarity=0.359 Sum_probs=82.8
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHH
Q 002172 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (956)
Q Consensus 499 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~ 578 (956)
.+|+.|++.|+++.++||.....+..+++++|+..- |.. .++|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecC--CCcHHHHHH
Confidence 689999999999999999999999999999998421 111 123444444
Q ss_pred HH-hhC---CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHHHHHH
Q 002172 579 RL-QAR---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSR 640 (956)
Q Consensus 579 ~l-q~~---g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai~~gR 640 (956)
.+ ++. ...|+|+||+.||.+|++.|+++++++++.+..+..||+++-.++ +..+.+.+...|
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 43 222 346999999999999999999999999888888989999995332 344555554333
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.6e-06 Score=94.82 Aligned_cols=65 Identities=20% Similarity=0.223 Sum_probs=51.4
Q ss_pred HHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccc--eeecCCChhHHHHHHH
Q 002172 573 KYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 637 (956)
Q Consensus 573 K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD--ivL~~~~~~~iv~ai~ 637 (956)
|..-++.+.+. | .-|+++|||-||.+||+.|+.|+||++|++.+|+.|| .|..+++=..+..+++
T Consensus 191 Kg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 191 KGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred hHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 55545544332 2 3489999999999999999999999999999999988 6776767677777663
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.39 E-value=8.6e-07 Score=92.30 Aligned_cols=117 Identities=27% Similarity=0.381 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... +...... .+... . +.+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~-~~~g~-~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVF-DEKGF-I----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEE-cCCCe-E----------ecceeeEEccc
Confidence 6899999999999999999999999999999999999997421 1111111 00000 0 00122334567
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccc
Q 002172 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (956)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD 621 (956)
.|.++++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788777776543 23589999999999999999999999865555666666
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.34 E-value=0.00014 Score=85.59 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=75.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. ++.+ +. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigs-d~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFAS-DG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeC-CC------------------ccccCCc
Confidence 5889999999999999999999999999999999999997321 1111 10 1245677
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHh
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak 617 (956)
.|.+.++.....+ -+.++||..||.|+++.|+-.++++.+...++
T Consensus 128 ~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 7866554332222 25789999999999999999999985554433
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.9e-06 Score=101.46 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=47.9
Q ss_pred EEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 586 ~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
-|+++|||.||.+||+.|+.||||++|.+..|++||+|..+++=..+..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888788887774
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.1e-06 Score=92.02 Aligned_cols=143 Identities=19% Similarity=0.203 Sum_probs=98.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCcc-------------cc---------
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNK-------------DE--------- 548 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~-------------~~--------- 548 (956)
..+-+++.++|++++++|+++.+.||.....+..+..++++.... ....|.-. +.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~---I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYF---ICSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEE---EEGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhh---cccccceeeecccccchhhheeccchhheeeh
Confidence 457799999999999999999999999999999999999985211 00011000 00
Q ss_pred --------------------c------------------------------------cCcccHHH-------Hhhhc-c-
Q 002172 549 --------------------S------------------------------------IVALPVDE-------LIEKA-D- 563 (956)
Q Consensus 549 --------------------~------------------------------------~~~~~~~~-------~~~~~-~- 563 (956)
. .+...+++ ..... .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 0 00000111 11110 1
Q ss_pred -----eEEeeCh--hhHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHH
Q 002172 564 -----GFAGVFP--EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632 (956)
Q Consensus 564 -----vfar~~P--e~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~i 632 (956)
-+-.++| ..|..-++.+.+. ...+.++||+-||.+||+.|+.|+||+++++..++.||.+....+=..+
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv 250 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGV 250 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHH
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChH
Confidence 1223444 5688777777642 3468899999999999999999999999999999999999987665777
Q ss_pred HHHH
Q 002172 633 ISAV 636 (956)
Q Consensus 633 v~ai 636 (956)
.++|
T Consensus 251 ~~~i 254 (254)
T PF08282_consen 251 AKAI 254 (254)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.30 E-value=8.5e-07 Score=91.57 Aligned_cols=92 Identities=25% Similarity=0.328 Sum_probs=70.7
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh-h-
Q 002172 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE-H- 572 (956)
Q Consensus 495 ~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe-~- 572 (956)
+++++.|+.++++|++++++||+....+..+++.+|++........+. +. .+....++.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~----~~-----------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELF----DN-----------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEE----CT-----------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeee----ec-----------ccceeeeeECCCCCC
Confidence 888899999999999999999999999999999999964211111110 00 012245666665 4
Q ss_pred -HHHHHHHH------hhCCCEEEEEcCCccChhhhc
Q 002172 573 -KYEIVKRL------QARKHICGMTGDGVNDAPALK 601 (956)
Q Consensus 573 -K~~iV~~l------q~~g~~V~m~GDGvNDapALk 601 (956)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.1e-06 Score=91.74 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=53.7
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.++ | .-|+++||+.||.+|++.|++|+||+++.+..|+.||+|..+++=..+..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 355555544332 3 35899999999999999999999999999999999999998888888887774
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.27 E-value=5e-06 Score=87.93 Aligned_cols=134 Identities=12% Similarity=0.062 Sum_probs=87.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccCCccccccCcccHHHHhhhcceE---E
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-SALLGQNKDESIVALPVDELIEKADGF---A 566 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~vf---a 566 (956)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+.. ..+.+......... ...+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 479999999999999999999999999999888888887543222111 11111111100000 0000 0
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHh--hccceeecCCChhHHHHHH
Q 002172 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak--~aADivL~~~~~~~iv~ai 636 (956)
++ ...|..+++.++.....|.|+|||.||.+|++.||+++|=+.-.+-.+ .-+.+.+ ++|..+...+
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 11 347999999998888889999999999999999999877542111111 1122223 5677776665
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.24 E-value=1e-05 Score=88.05 Aligned_cols=54 Identities=20% Similarity=0.226 Sum_probs=45.3
Q ss_pred CCEEEEEcCCccChhhhccCCeeEEecccc---HHHhhc--c-ceeecCCChhHHHHHHH
Q 002172 584 KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 637 (956)
Q Consensus 584 g~~V~m~GDGvNDapALk~AdVGIamg~gt---d~Ak~a--A-DivL~~~~~~~iv~ai~ 637 (956)
...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|..+++-..+..+++
T Consensus 194 ~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 456999999999999999999999999987 468876 4 58777778788877774
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.4e-06 Score=85.10 Aligned_cols=110 Identities=22% Similarity=0.253 Sum_probs=76.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
.+-|++++.++.|++.|.+|.++||--...+..+|.++||+..+.....+.=.. +.........+ .-+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-~Gk~~gfd~~~--------ptsdsg 158 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-DGKYLGFDTNE--------PTSDSG 158 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc-CCcccccccCC--------ccccCC
Confidence 356899999999999999999999999999999999999975322211111000 00000000000 001134
Q ss_pred hHHHHHHHHhhC--CCEEEEEcCCccChhhhccCCeeEEec
Q 002172 572 HKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 572 ~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
-|.++++.+++. -..++|+|||+||.+|+..||-=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 799999999885 347999999999999999977766665
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.5e-05 Score=84.71 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+........+ ........ .... ..+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--GEYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--CcEECccC------CCcc--cCC
Confidence 478999999999999999999999999999999999999963 111100000000 00000000 0000 112
Q ss_pred hhHHHHHHHHhhC-C-CEEEEEcCCccChhhhcc--CCeeEEeccc--cHHHhhccceeecCCChhHHHH
Q 002172 571 EHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 571 e~K~~iV~~lq~~-g-~~V~m~GDGvNDapALk~--AdVGIamg~g--td~Ak~aADivL~~~~~~~iv~ 634 (956)
..|.+.++.+.++ | ..|.|+||+.||..|.++ ++++++.+.+ .+.....+|+++ +++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 3477777776654 2 468899999999999877 5776766532 233345689988 44665554
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.14 E-value=8.4e-06 Score=88.59 Aligned_cols=64 Identities=23% Similarity=0.274 Sum_probs=53.1
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
.|..-++.+.+. | ..|+++||+.||.+|++.|+.|+||+++++..|+.||++..+++-..+..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 477777766553 2 459999999999999999999999999999999999999987766665543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.3e-05 Score=84.73 Aligned_cols=53 Identities=23% Similarity=0.167 Sum_probs=43.6
Q ss_pred CEEEEEcCCccChhhhccCCeeEEecccc-H---H--HhhccceeecCCChhHHHHHHH
Q 002172 585 HICGMTGDGVNDAPALKKADIGIAVADAT-D---A--ARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 585 ~~V~m~GDGvNDapALk~AdVGIamg~gt-d---~--Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..|.++|||-||.+||+.|++||||+++. + . -+..+|++....+-..+.++++
T Consensus 207 ~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 207 PTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred ceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 46899999999999999999999999544 2 1 3447899998888888888775
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=8.6e-06 Score=78.72 Aligned_cols=113 Identities=24% Similarity=0.413 Sum_probs=87.2
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHH
Q 002172 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 579 (956)
.|+.+.++||+|-+|||.+......=|+.+||.. ...| -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG--------------------------~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG--------------------------ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec--------------------------hHhHHHHHHH
Confidence 5899999999999999999999999999999952 1111 2567666665
Q ss_pred HhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHHHHHHHHHH
Q 002172 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQ 644 (956)
Q Consensus 580 lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai~~gR~~~~ 644 (956)
|.++ -.-|+++||-.||-|+|++...++|+.++..-.++.||+|+...+ +..+.+.|...+..++
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 5543 346999999999999999999999999999999999999986554 3444555544444433
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.5e-05 Score=81.97 Aligned_cols=113 Identities=15% Similarity=0.056 Sum_probs=75.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCccc-HHHHhhhcceEEe-e
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALP-VDELIEKADGFAG-V 568 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~-~~~~~~~~~vfar-~ 568 (956)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++.. +... ++.. +.-...++.++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~-~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSN-PASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEecc-CceE--CCCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999998885321 111211 1100 0000 0000000011111 1
Q ss_pred ChhhHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCeeEE
Q 002172 569 FPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
....|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8889999999999999999987554
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.04 E-value=4.3e-05 Score=83.92 Aligned_cols=66 Identities=24% Similarity=0.298 Sum_probs=49.9
Q ss_pred hHHHHHHHHhh----CC-CEEEEEcCCccChhhhccCCeeEEeccccHHHh----hcc-ceee--cCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQA----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~----~g-~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak----~aA-DivL--~~~~~~~iv~ai~ 637 (956)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++=..+..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 45555544443 24 789999999999999999999999999999999 666 5666 3445566666663
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.99 E-value=1e-05 Score=82.38 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=70.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..- +. ..+...+ +....... ..-....++
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~-~~~~~~~-~g~~~g~~--------~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FA-NRLEFDD-NGLLTGPI--------EGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-ee-eeEEECC-CCEEeCcc--------CCcccCCcc
Confidence 4689999999999999999999999999999999999998521 11 1110000 00000000 000124568
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChhhhccC
Q 002172 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA 603 (956)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~A 603 (956)
.|...++.++++ ...|.|+|||.||.||++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.9e-05 Score=82.33 Aligned_cols=132 Identities=12% Similarity=0.041 Sum_probs=85.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccCCccccccCcccHHHHhhhcce--E-E
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQNKDESIVALPVDELIEKADG--F-A 566 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~v--f-a 566 (956)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +..+... ...+.|.......... .. + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p---------~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP---------CDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC---------ccccccc
Confidence 68999999999999999999999999999999998887 6432110 0111111110000000 00 0 0
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHH--hhccceeecCCChhHHHHHH
Q 002172 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAA--RSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~A--k~aADivL~~~~~~~iv~ai 636 (956)
++ ...|..+++.++.....|.|+|||.||.+|.++||+.++-+.-.+.+ +..+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 01 13488899998887778999999999999999999977733111222 22244433 5577776655
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=7.1e-05 Score=79.42 Aligned_cols=125 Identities=17% Similarity=0.162 Sum_probs=90.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC-
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF- 569 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~- 569 (956)
.++.||+.+.++.|++.|+++.++||........+.+++|+... ....+.+.. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY--FSVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC--ccEEEcCCC-------------------CCCCCc
Confidence 46889999999999999999999999999999999999998532 111111111 11122
Q ss_pred -hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEecc----ccHHHhhccceeecCCChhHHHHHHHH
Q 002172 570 -PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 570 -Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~----gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
|+--..+.+.++.....+.|+||+.||..|.+.|++ +|.+.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 333345666666566779999999999999999999 566642 2344455788888 778888877754
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.88 E-value=3e-05 Score=80.94 Aligned_cols=108 Identities=17% Similarity=0.101 Sum_probs=77.2
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceE-Eee
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGV 568 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf-ar~ 568 (956)
..++++++.+.++.+++.|+++.++||-....+..+++.+|+..- .......+. +....+. +- -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~--~g~~~g~----------~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE--DGIYTGN----------IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC--CCEEeCC----------ccCCCC
Confidence 347899999999999999999999999999999999999998531 111111000 0000000 00 123
Q ss_pred ChhhHHHHHHHHhh-CCC---EEEEEcCCccChhhhccCCeeEEec
Q 002172 569 FPEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~-~g~---~V~m~GDGvNDapALk~AdVGIamg 610 (956)
.++.|.+.++.+.+ .|. .+.++||+.||.|+++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 46788888877654 342 6889999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00025 Score=75.35 Aligned_cols=126 Identities=17% Similarity=0.188 Sum_probs=94.1
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (956)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..- ...+..+.... ...=.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~--F~~i~g~~~~~-----------------~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY--FDVIVGGDDVP-----------------PPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc--cceEEcCCCCC-----------------CCCcC
Confidence 457889999999999999999999999999999999999999642 11111111110 11224
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCC---eeEEecc--ccHHHhhccceeecCCChhHHHHHH
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad---VGIamg~--gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
|+....+.+.+....+.+.||||..||..|=|+|+ ||+..|. ........+|.++ ++++.+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 67777777777766457999999999999999998 6666663 4567777799999 5677766554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00023 Score=74.57 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+++++|++.|+++.++||.....+...-+.+|+... ...++...+. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL--FDHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh--eeeEEecCcC-----------------CCCCCChH
Confidence 7889999999999999999999999998888888888888431 1111111100 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Ee--c--cccHHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV--A--DATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am--g--~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
-=.++++.++-....+.|+||+.+|..|-++|++.. ++ | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 334555556555567999999999999999999863 33 2 23345567799988 5566665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00013 Score=69.95 Aligned_cols=118 Identities=15% Similarity=0.071 Sum_probs=78.0
Q ss_pred ccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 488 ~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ...++....... ...............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAI-YYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhh-hcccccccccccccccCC
Confidence 44568999999999999999999999999999999999999987321 111111000000 000000000011123345
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhcc-CCeeEE
Q 002172 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK-ADIGIA 608 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~-AdVGIa 608 (956)
-.|+.+..+.+.+......+.++||+.||.+|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56777777888877666789999999999999998 554554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00078 Score=73.97 Aligned_cols=125 Identities=15% Similarity=0.159 Sum_probs=82.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+.... ..++.+.+.. ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478999999999999999999999999998888888888874311 1111111100 001112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecc----ccHHHhhccceeecCCChhHHHHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVAD----ATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~----gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+-=..+.+.+.-....|.|+||+.||..|.++|++- +++.. ..+..+..+|.++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 222334444433446799999999999999999973 44432 2333445789988 4577766543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00092 Score=70.51 Aligned_cols=124 Identities=18% Similarity=0.138 Sum_probs=84.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+..- ...++.+.+.. ...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF--FDVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc--eeEEEecCcCC-----------------CCCCCcH
Confidence 4779999999999999999999999999999988899998531 11122111100 0112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Ee--ccc--cHHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV--ADA--TDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am--g~g--td~Ak~aADivL~~~~~~~iv~ai 636 (956)
--.++.+.+.-....+.|+||..+|..|-++|++-. ++ +.. .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 334555555544567899999999999999999842 23 311 223445688887 5677776654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00066 Score=73.51 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=93.6
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----CCc-cccCC--cccc---------------
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----PSS-ALLGQ--NKDE--------------- 548 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----~~~-~l~g~--~~~~--------------- 548 (956)
.+..|...++++++++.|+.++..||......+.+.+++++....+ ... +..+. ..+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567899999999999999999999999999999999888754310 000 11000 0000
Q ss_pred --------c-----------------cCccc----H---HHHhhhc--ce---EE-----eeCh--hhHHHHHHHHhhC-
Q 002172 549 --------S-----------------IVALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQAR- 583 (956)
Q Consensus 549 --------~-----------------~~~~~----~---~~~~~~~--~v---fa-----r~~P--e~K~~iV~~lq~~- 583 (956)
. ..... + .+.+... ++ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 00000 1 1111111 11 11 3344 4688878877653
Q ss_pred ---CCEEEEEcCCccChhhhcc-CCeeEEeccccHHHhhccc-------eeecCCChhHHHHHHH
Q 002172 584 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 637 (956)
Q Consensus 584 ---g~~V~m~GDGvNDapALk~-AdVGIamg~gtd~Ak~aAD-------ivL~~~~~~~iv~ai~ 637 (956)
...|.++||+.||.+|++. ++.|++|+++.+..++.+| ++-....-+.+.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 7799999999888886543 4443444556666553
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00094 Score=71.17 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=38.5
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555667999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0011 Score=69.65 Aligned_cols=120 Identities=16% Similarity=0.139 Sum_probs=80.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC--
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF-- 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~-- 569 (956)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+... ...++.+.+ ..+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~-------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY--FSVLIGGDS-------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh--CcEEEecCC-------------------CCCCCCC
Confidence 6889999999999999999999999999999999999998532 111111111 01112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE-eccc----cHHHhhccceeecCCChhHHHH
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA----TDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~g----td~Ak~aADivL~~~~~~~iv~ 634 (956)
|+-=.+..+.+.-....+.|+||..||..|.++|++-.. +..| .+.....+|+++ +++..+..
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 222233444444444569999999999999999998754 4222 123334688887 45665543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00064 Score=72.92 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=53.8
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccc----eeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD----ivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=..+.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677777777553 3 2588999999999999999999999999999999999 6665666566777764
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0034 Score=66.55 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=35.9
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002172 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
-+.++++|++|++.||+++++||.....+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0015 Score=69.26 Aligned_cols=122 Identities=15% Similarity=0.192 Sum_probs=78.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
-+|.|++.++++.|++.|+++.++|+........+.+++|+..-. ..++.+.+.. ...-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC-----------------CCCCCH
Confidence 367899999999999999999999999999999999999985321 1122111100 111223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe-ccc---cHHHhhccceeecCCChhHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 633 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-g~g---td~Ak~aADivL~~~~~~~iv 633 (956)
+-=..+.+.+.-..+.|.|+||..||+.|-++|++.... ..+ .+.-...+|+++ .+|..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 322223333332335689999999999999999987543 322 222223577777 4455543
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0079 Score=65.47 Aligned_cols=128 Identities=13% Similarity=0.088 Sum_probs=84.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------CccccCCccccccCcccHHHHhh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------SSALLGQNKDESIVALPVDELIE 560 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------~~~l~g~~~~~~~~~~~~~~~~~ 560 (956)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+...... ..+++|.. + .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~---------P--- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-G---------P--- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-C---------C---
Confidence 47899999999999999999999999999999999999998532110 01111110 0 0
Q ss_pred hcceEEeeChhhHHHHHHH-----Hh--hCCCEEEEEcCCccChhhhccC---CeeEEec--c-----ccHHHhhcccee
Q 002172 561 KADGFAGVFPEHKYEIVKR-----LQ--ARKHICGMTGDGVNDAPALKKA---DIGIAVA--D-----ATDAARSASDIV 623 (956)
Q Consensus 561 ~~~vfar~~Pe~K~~iV~~-----lq--~~g~~V~m~GDGvNDapALk~A---dVGIamg--~-----gtd~Ak~aADiv 623 (956)
-+....|.+.+.. +. .....|.|+|||.||++|-.-. +-=|.+| + --+.=+++=|||
T Consensus 187 ------~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 187 ------LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred ------cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0001345554432 22 2235688999999999996544 2233444 2 134456788999
Q ss_pred ecCCChhHHHHHHH
Q 002172 624 LTEPGLSVIISAVL 637 (956)
Q Consensus 624 L~~~~~~~iv~ai~ 637 (956)
|.+|.=-.++.+|.
T Consensus 261 l~~D~t~~v~~~il 274 (277)
T TIGR01544 261 LVQDETLEVANSIL 274 (277)
T ss_pred EECCCCchHHHHHH
Confidence 99997777776663
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0038 Score=66.05 Aligned_cols=125 Identities=17% Similarity=0.158 Sum_probs=80.7
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+....+...++.+.+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 479999999999999999999999999999999998999985211112222221110 011122
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCeeE--Eecccc----HHHhhccceeecCCChhHHHH
Q 002172 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 571 e~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGI--amg~gt----d~Ak~aADivL~~~~~~~iv~ 634 (956)
+-=....+.+.-. ...+.|+||+.+|..|-++|++.. ++..|. ......+|.++ ++++.+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2222333433333 357999999999999999999986 333322 12234577777 45665544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0022 Score=70.16 Aligned_cols=138 Identities=10% Similarity=0.080 Sum_probs=82.9
Q ss_pred CCCccHHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc---cCC----cccc---------------
Q 002172 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL---LGQ----NKDE--------------- 548 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l---~g~----~~~~--------------- 548 (956)
.+-+++.++|++|++ .|+.++++||..........+.+++.--..+...+ .+. ..+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999888887766642000000000 000 0000
Q ss_pred -------------------ccCc--ccHHHH----hhhcc--------eEEeeCh--hhHHHHHHHHhhC----CCEEEE
Q 002172 549 -------------------SIVA--LPVDEL----IEKAD--------GFAGVFP--EHKYEIVKRLQAR----KHICGM 589 (956)
Q Consensus 549 -------------------~~~~--~~~~~~----~~~~~--------vfar~~P--e~K~~iV~~lq~~----g~~V~m 589 (956)
.... ..+.++ .+... .+-.+.| .+|..-|+.+.+. +..|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 001111 11111 1223344 3787777765543 356889
Q ss_pred EcCCccChhhhccC----CeeEEeccccHHHhhccceeecCCChhHHHHH
Q 002172 590 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 590 ~GDGvNDapALk~A----dVGIamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
+||+.||.+|++.+ +.||+||++. ..|++.|.+ ...+...
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~ 239 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSW 239 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHH
Confidence 99999999999999 9999999765 356787754 4444333
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.004 Score=66.49 Aligned_cols=123 Identities=15% Similarity=0.100 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+... -..++.+.+.. ...-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~-----------------~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR--CAVLIGGDTLA-----------------ERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc--ccEEEecCcCC-----------------CCCCCHH
Confidence 6789999999999999999999999998888888888887432 11111111100 1122243
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Eeccc----c-HHHhhccceeecCCChhHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA----T-DAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~g----t-d~Ak~aADivL~~~~~~~iv~a 635 (956)
-=..+.+.+.-....+.|+||+.||..|-++|++-. ++..| . ......+|+++ +++..+...
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 334566666655667999999999999999998873 34322 1 12234689988 556655543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0049 Score=64.99 Aligned_cols=106 Identities=13% Similarity=0.047 Sum_probs=75.1
Q ss_pred CCCccHHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceE-EeeC
Q 002172 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGVF 569 (956)
Q Consensus 492 ~lR~~~~~aI-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf-ar~~ 569 (956)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... ..+.+.+.+.... ..+. ..|.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~----~~~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR----VNLIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc----CceEEEEEEEEEc----------cEECCccCC
Confidence 5589999999 578889999999999999999999999996210 0111211111000 0011 2366
Q ss_pred hhhHHHHHHHH-hhCCCEEEEEcCCccChhhhccCCeeEEecc
Q 002172 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (956)
Q Consensus 570 Pe~K~~iV~~l-q~~g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (956)
.++|.+-++.. .......-+=||..||.|+|+.|+-.++++.
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 78999877754 3334455678999999999999999999974
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.008 Score=65.18 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=66.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+|.||+.+.++.|++.|+++.++||.....+..+-+++|+.... ...++.+.+.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC-----------------CCCCCHH
Confidence 56789999999999999999999999999999888888885321 11222221110 0111233
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCee
Q 002172 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVG 606 (956)
-=....+.+.-. .+.+.|+||..+|.-|=++|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 323344444322 34589999999999999999975
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.005 Score=64.89 Aligned_cols=106 Identities=11% Similarity=0.033 Sum_probs=74.1
Q ss_pred CCCccHHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++|++.++|+ .+++.|++++++|+=....+..+++..|+... ..++ +.+.+.. .+ .. . .=..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~g---g~----~-~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NG---GW----V-LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CC---ce----E-cCccCCC
Confidence 46899999996 78889999999999999999999998655221 0111 2211100 00 00 0 0124667
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002172 571 EHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 571 e~K~~iV~~l-q~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
++|.+-++.. .......-+=||..||.|||+.||-.+++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 8999877754 323345568899999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.014 Score=64.10 Aligned_cols=121 Identities=14% Similarity=0.103 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.+. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F--~~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF--SVVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe--EEEEecCCC------------------C--CCHH
Confidence 57899999999999999999999999999999999999985321 111211110 0 0122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE-eccc--c--HHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA--T--DAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~g--t--d~Ak~aADivL~~~~~~~iv~ai 636 (956)
-=..+++.++-....++|+||+.+|..|-++|++-.. +..| + +.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 2122333333334569999999999999999988633 3332 2 23344689988 6677776654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.011 Score=64.42 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=79.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+..- ...++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 5689999999999999999999999999999998888998531 22233222211 0111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Eec-cccHHHhhccceeecCCChhHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVA-DATDAARSASDIVLTEPGLSVI 632 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg-~gtd~Ak~aADivL~~~~~~~i 632 (956)
-=....+.+.-....+.|+||..+|..|-++|++-. ++. ..+......+|.++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 223445555544566999999999999999999853 443 22222233578877 445544
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.015 Score=63.69 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=63.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-. ...++.+.+.. ...-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcCC-----------------CCCCChH
Confidence 56789999999999999999999999998887777777764211 11122111100 0111222
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCee
Q 002172 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVG 606 (956)
-=....+.+.-. ...+.|+||..+|..|-++|++-
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 223333444322 24689999999999999999973
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0041 Score=64.69 Aligned_cols=94 Identities=18% Similarity=0.080 Sum_probs=68.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (956)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..- ...++.+.+ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL--FPVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh--CCEEEeecC------------------CCCCcC
Confidence 455777889999999999999999999999999999999998521 111221111 111334
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccC
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~A 603 (956)
|+--..+.+.+.-....|.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5555666676666666799999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0074 Score=64.53 Aligned_cols=92 Identities=20% Similarity=0.244 Sum_probs=64.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
.|.+++++.++.+++.|+++.++||. ...++..+.+..|++.+.+....+.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 57788999999999999999999995 36799999998999532222222222110
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEe
Q 002172 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAV 609 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iam 609 (956)
.-++|... +++.| .+.|+||..+|..|-++|++- |.+
T Consensus 173 -~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 173 -GQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred -CCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 01344443 34444 488999999999999999875 444
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.02 Score=62.04 Aligned_cols=116 Identities=13% Similarity=0.127 Sum_probs=79.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+-....+...-+++|+..- ...++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF--FQAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh--CcEEEecCcCC-----------------CCCCChH
Confidence 5788999999999999999999999999999998899998532 12233222211 0122234
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Eecccc---HHHhhccceeecC
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADAT---DAARSASDIVLTE 626 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~gt---d~Ak~aADivL~~ 626 (956)
-=....+.+.-....+.|+||..+|..|=++|++-. ++..|. +.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 444555666555567999999999999999998853 333221 2223468888844
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.019 Score=69.37 Aligned_cols=48 Identities=8% Similarity=0.071 Sum_probs=39.2
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002172 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 485 Gli~~~D~-lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
|.+.-.|. .-+.+.++|++|+++||.+++.||....-+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 3457899999999999999999999999999999999974
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.025 Score=61.67 Aligned_cols=43 Identities=7% Similarity=-0.014 Sum_probs=38.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (956)
+..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0055 Score=71.24 Aligned_cols=65 Identities=23% Similarity=0.214 Sum_probs=47.5
Q ss_pred hHHHHHHHHhhC----C---CEEEEEcCCccChhhhccCC-eeEEeccccHHHhhcc--------ceeecC-CChhHHHH
Q 002172 572 HKYEIVKRLQAR----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLTE-PGLSVIIS 634 (956)
Q Consensus 572 ~K~~iV~~lq~~----g---~~V~m~GDGvNDapALk~Ad-VGIamg~gtd~Ak~aA--------DivL~~-~~~~~iv~ 634 (956)
.|..-++.|.+. | ..|..+||+.||.+||+.|+ .||+|+++.+..|+.+ |++..+ .+-..|.+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~ 254 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQ 254 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence 477777766554 2 37899999999999999999 6999999998888643 555443 33445555
Q ss_pred HH
Q 002172 635 AV 636 (956)
Q Consensus 635 ai 636 (956)
++
T Consensus 255 al 256 (413)
T PLN02382 255 AI 256 (413)
T ss_pred HH
Confidence 54
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.017 Score=68.31 Aligned_cols=123 Identities=11% Similarity=0.073 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..- -..++.+.+.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~--f~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW--VTETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh--cceeEecCCCC------------------CCCCcH
Confidence 7889999999999999999999999999999999999998531 11222221110 011233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecc--ccHHHhhccceeecCCChhHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~--gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
-=....+.++ ...+.|+||..+|..|-++|++- |++.. +.+.....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 2222333332 34699999999999999999984 45532 2222234588888 567777766543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.02 Score=59.75 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=35.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (956)
++.+++.+++++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999998888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.024 Score=59.96 Aligned_cols=114 Identities=15% Similarity=0.153 Sum_probs=72.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. ...++.+.+.. ...-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc-----------------CCCCCcH
Confidence 578999999999999999999999988776666556666631 11122111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecccc-HHHhhccceeec
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 625 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gt-d~Ak~aADivL~ 625 (956)
-=....+.+.-....+.|+||..+|..|-++|++- |++..+. +.....+|+++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 22334444444456799999999999999999985 5665332 223345777763
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.019 Score=60.56 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=66.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+-+...+...-+++|+..- -..++.+.+ ..+..|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF--FDAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh--ccEEEEecc-------------------CCCCCCC
Confidence 5789999999999999999999999888777777788887421 111221111 1122232
Q ss_pred h--HHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCee-EEecc
Q 002172 572 H--KYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVAD 611 (956)
Q Consensus 572 ~--K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVG-Iamg~ 611 (956)
. =..+.+.+.-....+.|+||.. +|..+-++|++- |.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 2 2233344433345789999998 999999999874 55543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.018 Score=64.08 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=77.0
Q ss_pred ccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 488 ~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
...+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..... ..+.|.+. ....+.... --+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~~-~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQG-DKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccCC-CCC
Confidence 3678999999999999999999999999999999999999998853111 11112110 000000000 023
Q ss_pred eChhhHHHHHHHHhh-CCCEEEEEcCCccChhhhccCCeeE
Q 002172 568 VFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
-.|+-+....+.+-. .-..+.|+||..||+-|-++|++-.
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 447777887776644 3368999999999999999999873
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.016 Score=62.13 Aligned_cols=92 Identities=20% Similarity=0.212 Sum_probs=63.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
.|.+++++.++.+++.|+++.++|+- ...++..+.+.+|+... ...++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC-------------------C
Confidence 34555999999999999999999997 66799999999999531 11222221110 0
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEe
Q 002172 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAV 609 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iam 609 (956)
-.| +|. ..+++.| ++.|+||..||..|-++|++- |++
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 112 232 2345555 478999999999999998764 444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.068 Score=67.03 Aligned_cols=170 Identities=17% Similarity=0.181 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEec--cCCCCCccHHHHHHHHHh-CCCeEEEEcCCChHHHHH
Q 002172 448 HAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMP--LFDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKE 524 (956)
Q Consensus 448 ~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~--~~D~lR~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~ 524 (956)
+...+.|...-.|.+++-+.. +++.... -...+-+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344556666667888877654 4433211 112367899999999999 699999999999988877
Q ss_pred HHHHhCCCCCCCCCcccc--CCcc------cc---------------------------c------cCcccH--------
Q 002172 525 TGRRLGMGTNMYPSSALL--GQNK------DE---------------------------S------IVALPV-------- 555 (956)
Q Consensus 525 ia~~lGi~~~~~~~~~l~--g~~~------~~---------------------------~------~~~~~~-------- 555 (956)
....+++.--..+...+. +... +. . ..+.++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 655444310000000000 0000 00 0 000001
Q ss_pred HHHhhh----c--ce-----EEeeCh--hhHHHHHHHHhhC--CCEEEEEcCCccChhhhccC---CeeEEeccccHHHh
Q 002172 556 DELIEK----A--DG-----FAGVFP--EHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 617 (956)
Q Consensus 556 ~~~~~~----~--~v-----far~~P--e~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~A---dVGIamg~gtd~Ak 617 (956)
.+.+.. . .+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 11 123334 4788888888764 24799999999999999987 588888874 4
Q ss_pred hccceeecCCChhHHHHHH
Q 002172 618 SASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 618 ~aADivL~~~~~~~iv~ai 636 (956)
.+|++.|.++ ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6788888654 4444433
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.05 Score=55.81 Aligned_cols=127 Identities=21% Similarity=0.125 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChH---------------HHHHHHHHhCCCCCCCCCccccCCccccccCcccHH
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 556 (956)
++.||+.+++++|++.|+++.++|..... ....+-++.|+.-+ .++....... .+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~~----~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHPE----DG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCCC----CC--
Confidence 46799999999999999999999987621 11112233444200 1110000000 00
Q ss_pred HHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-EeccccH---HHhhcc--ceeecCCChh
Q 002172 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADATD---AARSAS--DIVLTEPGLS 630 (956)
Q Consensus 557 ~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~gtd---~Ak~aA--DivL~~~~~~ 630 (956)
.....-.|+--....+.+.-..+.+.|+||..+|..+-++|++-. .+..|.. .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001122244334555555555567999999999999999999752 3333321 112235 7777 5566
Q ss_pred HHHHHH
Q 002172 631 VIISAV 636 (956)
Q Consensus 631 ~iv~ai 636 (956)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666554
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.034 Score=56.71 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=59.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcce
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG 564 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~--------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v 564 (956)
+.||+++++++|++.|+++.++|+.... .....-+..|+..- +......+.+. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6899999999999999999999987631 12222334555210 00000000000 0
Q ss_pred EEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002172 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 565 far~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
...-.|+-=.++.+.+.-.-+.+.|+||..+|..|=++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222333345555555445679999999999999999988643
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.071 Score=54.97 Aligned_cols=145 Identities=21% Similarity=0.240 Sum_probs=94.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccc-------c------ccCcccHHHH
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD-------E------SIVALPVDEL 558 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~-------~------~~~~~~~~~~ 558 (956)
.+-||+.++++.|++. ...+++|---.+-+.++|..+|++........+.-++.. + ..+..+-+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4568999999998754 456667777788899999999995322111111000000 0 0112223334
Q ss_pred hhhcc-eEEeeChhhHHHHHHHHhhC------------------CCEEEEEcCCccChhhhccCC--eeEEec-cccHHH
Q 002172 559 IEKAD-GFAGVFPEHKYEIVKRLQAR------------------KHICGMTGDGVNDAPALKKAD--IGIAVA-DATDAA 616 (956)
Q Consensus 559 ~~~~~-vfar~~Pe~K~~iV~~lq~~------------------g~~V~m~GDGvNDapALk~Ad--VGIamg-~gtd~A 616 (956)
.++.+ +|.|..|.+--+|++..+.- ....+.+||.+.|..||+.+. =|+|++ +|.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 44433 68888887655555444332 234678999999999999875 247777 888888
Q ss_pred hhccceeecCCChhHHHHHHH
Q 002172 617 RSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 617 k~aADivL~~~~~~~iv~ai~ 637 (956)
..-||+.+..++.......|+
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 889999999999888777774
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.032 Score=57.98 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=65.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.+++++|++.|+++.++|+-+......+.+++|+... ...++...+. ....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~-------------------~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP--FDAVLSADAV-------------------RAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh--hheeEehhhc-------------------CCCCCC
Confidence 5789999999999999999999999888888888888887421 1112211110 111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
.. ..+.+.+.-....+.|+||+.+|..+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 21 334444444445689999999999998888775
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.036 Score=53.52 Aligned_cols=91 Identities=16% Similarity=0.165 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcc
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKAD 563 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 563 (956)
++.|++.++++.|++.|+++.++|+.. ......+.+++|+.... ....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~------------------ 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H------------------ 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C------------------
Confidence 678999999999999999999999988 67777888888874210 00100 0
Q ss_pred eEEeeChhhHHHHHHHHh-hCCCEEEEEcC-CccChhhhccCCe
Q 002172 564 GFAGVFPEHKYEIVKRLQ-ARKHICGMTGD-GVNDAPALKKADI 605 (956)
Q Consensus 564 vfar~~Pe~K~~iV~~lq-~~g~~V~m~GD-GvNDapALk~AdV 605 (956)
+..-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++
T Consensus 83 -~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 -CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred -CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 01111222234555552 44567999999 5899999988875
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.073 Score=60.78 Aligned_cols=120 Identities=17% Similarity=0.136 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||..- ...++.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC-----------------CCCCCHH
Confidence 4779999999999999999999999999999999899998531 12222221110 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-EeccccHHHh-hccceeecCCChhHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADATDAAR-SASDIVLTEPGLSVI 632 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~gtd~Ak-~aADivL~~~~~~~i 632 (956)
-=....+.+.-....+.|+||..+|+.|-+.|++-. ++..+.+... ..+|+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 334455556555677999999999999999999863 3344332222 3588887 456554
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.025 Score=57.82 Aligned_cols=94 Identities=12% Similarity=0.021 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+... +...-+++|+... -..++.+.+.. ..+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY--FDAIVDPAEIK-----------------KGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh--CcEEEehhhcC-----------------CCCCChH
Confidence 6789999999999999999999997532 3456677777422 11122111100 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
-=....+.+.-....+.|+||..+|+.|-++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22233333333334689999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.017 Score=57.88 Aligned_cols=97 Identities=18% Similarity=0.201 Sum_probs=69.0
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.|++.+.++.|++.|++++++|+-.........+++|+.. +...++...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchhh-----------------hhhhHH
Confidence 4688999999999999999999999999999999999999852 122222221111 011112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
+-=..+.+.+.-..+.+.|+||..+|.-+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 222455566655567799999999999999988764
|
... |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.056 Score=57.01 Aligned_cols=119 Identities=11% Similarity=0.084 Sum_probs=75.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++. +++.++|+-....+..+-+++|+..- -..++.+.+. ....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~--fd~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF--FDDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh--cCEEEEcCcc-------------------CCCCCC
Confidence 5789999999999999 99999999988888888888888532 1112211110 011232
Q ss_pred hH--HHHHHHH-hhCCCEEEEEcCCc-cChhhhccCCee-EEec--cccHHHhhccceeecCCChhHHHH
Q 002172 572 HK--YEIVKRL-QARKHICGMTGDGV-NDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 572 ~K--~~iV~~l-q~~g~~V~m~GDGv-NDapALk~AdVG-Iamg--~gtd~Ak~aADivL~~~~~~~iv~ 634 (956)
.. ....+.+ .-....+.|+||.. +|..+=+++++- |.+. ..+......+|.++ ++++.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 21 3334444 32345689999998 899999999973 4443 22222223566666 44555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.065 Score=59.34 Aligned_cols=120 Identities=18% Similarity=0.126 Sum_probs=72.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-SALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.|++.+.++.|++.|+++.++|+-+......+-+..+... .... ..+.+.+.. ...-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~-----------------~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDVP-----------------KKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEeccccC-----------------CCCCCH
Confidence 578999999999999999999999988776665555443211 0000 111111000 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE-ecccc--HHHhhccceeecCCChhH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADAT--DAARSASDIVLTEPGLSV 631 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~gt--d~Ak~aADivL~~~~~~~ 631 (956)
+-=..+.+.+.-....+.|+||+.+|..|-++|++... +..|. .-....+|+++ +++..
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~ 267 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGD 267 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhh
Confidence 33344555555445679999999999999999998744 32332 11123578887 44443
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.043 Score=54.92 Aligned_cols=111 Identities=14% Similarity=0.057 Sum_probs=67.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
.++|+-++.++.+++.+|+++++|+--.-.-..+=.+++=....+...+.. .+.. ....-.-.++... ....-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~s-n~~~--ih~dg~h~i~~~~---ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVS-NNDY--IHIDGQHSIKYTD---DSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEee-cCce--EcCCCceeeecCC---ccccCC
Confidence 578999999999999999999998876555554444443111000000000 0000 0000000000000 122236
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
+|...|+.|++..+.+-|+|||+.|..|-|.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999988777666544
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.06 Score=57.31 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=66.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh-
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P- 570 (956)
++.||+.+.++.|++.|+++.++|+-....+...-+..|+..- ...++.+.+ +.+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH--LDLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH--CCEEEEeee-------------------CCCCCCC
Confidence 6789999999999999999999999888887777677777421 111221111 111122
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee--EEecc
Q 002172 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVAD 611 (956)
Q Consensus 571 -e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iamg~ 611 (956)
+-=....+.+.-....+.|+||..+|+.|-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 222233344443445699999999999999999996 45543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.076 Score=53.95 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=62.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... ...++.+.+.. ...-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~-----------------~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG-----------------RGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC-----------------CCCCCHH
Confidence 678999999999999999999999988776 555555787421 11122111100 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV 605 (956)
-=..+.+.+.-....+.|+||...|..|-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 3344455555455679999999999998888876
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.047 Score=55.75 Aligned_cols=92 Identities=13% Similarity=0.104 Sum_probs=59.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++.|+++.++|+- ..+..+-+++|+..- ...++.+.+ ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~--f~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY--FDAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH--CCEeeehhh-------------------CCCCCCC
Confidence 78999999999999999999999986 556666777887421 111111110 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
.. ....+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 21 223333333345688999999999999998874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.15 Score=53.87 Aligned_cols=121 Identities=14% Similarity=0.114 Sum_probs=74.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|+ .|+++.++|......+...-+++|+..- -..++.+.+. ....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~v~~~~~~-------------------~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY--FDLLVISEQV-------------------GVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH--cCEEEEECcc-------------------CCCCCC
Confidence 47899999999999 6899999999888888777777887421 1112211110 011232
Q ss_pred --hHHHHHHHHhhC-CCEEEEEcCCc-cChhhhccCCee-EEec-cccH-HHhhccceeecCCChhHHHHHH
Q 002172 572 --HKYEIVKRLQAR-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 --~K~~iV~~lq~~-g~~V~m~GDGv-NDapALk~AdVG-Iamg-~gtd-~Ak~aADivL~~~~~~~iv~ai 636 (956)
-=..+++.+.-. ...+.|+||.. +|..+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 213334444322 24699999998 799999999985 4444 2221 1112467777 5566665543
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.14 Score=55.33 Aligned_cols=45 Identities=27% Similarity=0.320 Sum_probs=35.4
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHH
Q 002172 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 615 (956)
Q Consensus 571 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~ 615 (956)
..|..-|+.|+++ | +.|..+||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 5688888888775 2 3466789999999999999999999987766
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.11 Score=52.92 Aligned_cols=110 Identities=8% Similarity=-0.041 Sum_probs=68.7
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhc
Q 002172 484 IGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (956)
Q Consensus 484 lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 562 (956)
.....-+-++.||+.+.++.|++.|+++.++|+- ....+..+-..+|+..... ...+..... .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-e
Confidence 3334444578899999999999999999999965 8888888888888741000 000000000 0
Q ss_pred ceEEeeChhhH--HHHHHHHhhC------CCEEEEEcCCccChhhhccCCeeEEe
Q 002172 563 DGFAGVFPEHK--YEIVKRLQAR------KHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 563 ~vfar~~Pe~K--~~iV~~lq~~------g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
.+.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 2345555433 35699999999999999988886544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.13 Score=59.39 Aligned_cols=114 Identities=20% Similarity=0.172 Sum_probs=72.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR-RLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+... -..++.+.+.. ...-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--Fd~ii~~d~v~-----------------~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--FSVIVGGDEVE-----------------KGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--CCEEEehhhcC-----------------CCCCCH
Confidence 467999999999999999999999998877766554 5676321 11122111100 011122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccc--cHHHhhccceee
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVL 624 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g--td~Ak~aADivL 624 (956)
+-=.++.+.+.-..+.|.|+||..+|..|-++|++. |++..+ .+.....+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 222344455544456799999999999999999987 344432 232334466665
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.036 Score=59.90 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=46.8
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CccChhhhccC-CeeEEeccccHHHhhccceee
Q 002172 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 624 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GD----GvNDapALk~A-dVGIamg~gtd~Ak~aADivL 624 (956)
-+|..-++.|.+...-|+++|| |-||.+||+.| -.|+++++++|..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 5799888888877788999999 99999999987 788999999999998776554
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.093 Score=51.88 Aligned_cols=97 Identities=19% Similarity=0.161 Sum_probs=59.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccCCccccccCcccHH
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 556 (956)
++.|++.++++.|++.|+++.++|.... .....+.+.+|+....... ...+...+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF-CPHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE-CCCCCCCC---------
Confidence 4789999999999999999999998652 3455666777774110000 00000000
Q ss_pred HHhhhcceEEeeChhhH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 557 ~~~~~~~vfar~~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
...+ .|+-+ ..+.+.+.-..+.|.|+||...|..+-+.|++-
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0001 23222 233333333345699999999999998888764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.28 Score=49.84 Aligned_cols=108 Identities=12% Similarity=0.142 Sum_probs=71.2
Q ss_pred HHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCC
Q 002172 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMG 532 (956)
Q Consensus 454 ~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 532 (956)
+.+.|.+.+.+-... ++.- .=...+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~--~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVY--PDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------cccc--CCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 456788888776532 1110 0123578999999999999999999999987 57777777887763
Q ss_pred CCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhh--HHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCee
Q 002172 533 TNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH--KYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (956)
Q Consensus 533 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~--K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVG 606 (956)
.. .+ ...|.. =..+.+.+.-....+.|+||.. .|..+=++|++-
T Consensus 85 ~~-------~~-----------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL-------PH-----------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE-------cC-----------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 10 00 012211 1223333333345699999998 799999999874
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.48 Score=54.20 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=47.4
Q ss_pred EeeChh---hHHHHHHHHhhC-C-----C-EEEEEcCCccChhhhcc-----CCeeEEeccccHHHhhccceeecCCChh
Q 002172 566 AGVFPE---HKYEIVKRLQAR-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 566 ar~~Pe---~K~~iV~~lq~~-g-----~-~V~m~GDGvNDapALk~-----AdVGIamg~gtd~Ak~aADivL~~~~~~ 630 (956)
-.+.|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+|++|.+.. .|++.|-+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HH
Confidence 355664 898888877653 2 1 25899999999999996 68999999765433 57888844 45
Q ss_pred HHHHHH
Q 002172 631 VIISAV 636 (956)
Q Consensus 631 ~iv~ai 636 (956)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 554444
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.33 Score=48.66 Aligned_cols=102 Identities=15% Similarity=0.195 Sum_probs=65.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHh---C--CCCCCCCCccccCCccccccCcccHHHHhhh
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 561 (956)
+|.+.++++++++++++.|+++..+||.....+. ..-.++ | ++. ..++.... ..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g-------~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPD-------RLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCC-------cchhh-hhc
Confidence 4778999999999999999999999999987764 444442 2 321 11111000 00000 000
Q ss_pred cceEEeeCh-hhHHHHHHHHhh-----CCCEEEEEcCCccChhhhccCCe
Q 002172 562 ADGFAGVFP-EHKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADI 605 (956)
Q Consensus 562 ~~vfar~~P-e~K~~iV~~lq~-----~g~~V~m~GDGvNDapALk~AdV 605 (956)
.+. .-.| +.|.+.++.+++ ....++..||+.+|+.|-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 2234 348888887776 45678889999999999987665
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.26 Score=50.22 Aligned_cols=124 Identities=16% Similarity=0.129 Sum_probs=65.6
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCC-CCCc-cccCCccccccCcccH
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNM-YPSS-ALLGQNKDESIVALPV 555 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~-~~~~-~l~g~~~~~~~~~~~~ 555 (956)
+.|++.+++++|++.|+++.++|.-.. .....+-.+.|+.-+. +... ...|. + ++
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~--~------~~ 98 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGV--E------EF 98 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCccc--c------cc
Confidence 578999999999999999999997653 1111222233332100 0000 00000 0 00
Q ss_pred HHHhhhcceEEeeChh--hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee--EEecccc---HHHhhccceeecCCC
Q 002172 556 DELIEKADGFAGVFPE--HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVADAT---DAARSASDIVLTEPG 628 (956)
Q Consensus 556 ~~~~~~~~vfar~~Pe--~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iamg~gt---d~Ak~aADivL~~~~ 628 (956)
. +-.....|. -=....+.+.-....+.|+||..+|..|-++|++. |.+..|. ......+|+++ ++
T Consensus 99 ~------~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~ 170 (176)
T TIGR00213 99 R------QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NS 170 (176)
T ss_pred c------CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--cc
Confidence 0 000111232 22233333333345688999999999999999985 3444332 12223488888 44
Q ss_pred hhHH
Q 002172 629 LSVI 632 (956)
Q Consensus 629 ~~~i 632 (956)
+..+
T Consensus 171 ~~el 174 (176)
T TIGR00213 171 LADL 174 (176)
T ss_pred HHHh
Confidence 5443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.57 Score=46.65 Aligned_cols=110 Identities=12% Similarity=0.182 Sum_probs=77.3
Q ss_pred HHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002172 451 IDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (956)
Q Consensus 451 i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (956)
.+.+..+|++.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|--++.-+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 567889999999876543 333221 12355788889999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhC---CCEEEEEcCCc-cChhhhccCCee
Q 002172 531 MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR---KHICGMTGDGV-NDAPALKKADIG 606 (956)
Q Consensus 531 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~---g~~V~m~GDGv-NDapALk~AdVG 606 (956)
++.- +--..|-- ..+-+++++. -+-|+|+||-. .|+-+=+.|++=
T Consensus 85 v~fi------------------------------~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 85 VPFI------------------------------YRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred Ccee------------------------------ecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 8520 11112222 3456666665 45799999986 587776666543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.2 Score=52.09 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=57.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+... ...++...+.. ...-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~--fd~i~~s~~~~-----------------~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY--FDFVVTSYEVG-----------------AEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh--cceEEeecccC-----------------CCCCCHH
Confidence 57799999999999999999999975544 4566677777321 11111111100 0111121
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCe
Q 002172 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADI 605 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdV 605 (956)
-=..+.+.+.-....+.|+||.. +|+.+=++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11223344433446799999997 89988888765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.14 Score=50.74 Aligned_cols=91 Identities=21% Similarity=0.214 Sum_probs=57.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+..+++.+.++.|++.|+++.++|+-....+...-+.. +... ...++ +.+ ++...-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~-~~~-----------------~~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLIL-GSD-----------------EFGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEE-ecC-----------------CCCCCcCHH
Confidence 34479999999999999999999999988888777764 3211 11111 100 011111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCC
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad 604 (956)
-=..+.+.+.-.. .+.|+||..+|..|-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2233334443334 7899999999998877663
|
HAD subfamilies caused by an overly broad single model. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.37 Score=51.46 Aligned_cols=103 Identities=22% Similarity=0.228 Sum_probs=67.7
Q ss_pred CCCccHHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCC-cccc--ccCcccHHHHhhhcceEE
Q 002172 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ-NKDE--SIVALPVDELIEKADGFA 566 (956)
Q Consensus 492 ~lR~~~~~aI~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~-~~~~--~~~~~~~~~~~~~~~vfa 566 (956)
|+.|+.++.++.+ ++.|+.++++|--|.---..+=+.-|+... -+.+.+.. ..+. .+.-.+... +-|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~--f~~I~TNpa~~~~~G~l~v~pyh~-----h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC--FSEIFTNPACFDADGRLRVRPYHS-----HGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc--cceEEeCCceecCCceEEEeCccC-----CCCC
Confidence 7788999999999 568999999999998777777778787421 11112111 0000 000001110 2345
Q ss_pred eeCh-hhHHHHHHHHhhC----C---CEEEEEcCCccCh-hhhc
Q 002172 567 GVFP-EHKYEIVKRLQAR----K---HICGMTGDGVNDA-PALK 601 (956)
Q Consensus 567 r~~P-e~K~~iV~~lq~~----g---~~V~m~GDGvNDa-pALk 601 (956)
++.| --|..+++.+++. | ..|.++|||.||- |+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 6655 4799999988875 4 6899999999995 5554
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.17 Score=50.14 Aligned_cols=94 Identities=17% Similarity=0.025 Sum_probs=64.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
-++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+... +...++.+.+. .+..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~-------------------~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDEC-------------------VFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECccc-------------------cccCC
Confidence 367999999999998 5799999999999999999998887421 11222222111 11123
Q ss_pred hhHHHHHHHHh---hCCCEEEEEcCCccChhhhccCCeeEEe
Q 002172 571 EHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 571 e~K~~iV~~lq---~~g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
. +.+.++ .....|.|+||..+|..|-++|.|-|..
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 2 333333 3456799999999999998888665543
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.46 Score=51.83 Aligned_cols=86 Identities=14% Similarity=0.096 Sum_probs=57.1
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~---tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
..++-|++.+.++.+++.|+++.++|+-... .....-++.|+..... . .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~-d------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE-E------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc-c------------------------eEEe
Confidence 3567899999999999999999999997643 3334446678753211 1 1122
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhh
Q 002172 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapAL 600 (956)
|-....|..-.+.+.+.-.+++|+||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2111235555556655556899999999997654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.37 E-value=1.1 Score=48.23 Aligned_cols=94 Identities=17% Similarity=0.211 Sum_probs=59.1
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhc
Q 002172 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK--ETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 562 (956)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. +.-+++|+..+. ...++..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s------------------- 76 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISS------------------- 76 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEcc-------------------
Confidence 555556788999999999999999999999985544333 455777875211 1111110
Q ss_pred ceEEeeChhhHHHHHHHHhh---CCCEEEEEcCCccChhhhccCC
Q 002172 563 DGFAGVFPEHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKAD 604 (956)
Q Consensus 563 ~vfar~~Pe~K~~iV~~lq~---~g~~V~m~GDGvNDapALk~Ad 604 (956)
.. ....-+.+.+++ .+..+.|+||+.+|...+..++
T Consensus 77 ----~~--~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 77 ----GE--IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ----HH--HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 00 001122222232 2467999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.26 Score=49.64 Aligned_cols=99 Identities=14% Similarity=0.050 Sum_probs=58.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHH
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 556 (956)
++-|++.+++++|++.|+++.++|-- .......+-+.+|+.- . ..+.+.... ..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 46789999999999999999999974 2335566667777741 1 111110000 00
Q ss_pred HHhhhcceEEeeChhhH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002172 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 557 ~~~~~~~vfar~~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
+ +....|... ..+++.+.-....+.|+||+.+|..+-++|++-..
T Consensus 98 ------~-~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------N-CDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------C-CCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0 001123211 12223322223458999999999999999888643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.33 Score=51.35 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=58.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHH-HHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAK-ETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~-~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.||+.+.|+.|++.|+++.++||-...... ..-+..|+.. +...++.+.+.+ +.+..|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~--~f~~i~~~~~~~-----------------~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS--LMHHVVTGDDPE-----------------VKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh--hCCEEEECChhh-----------------ccCCCC
Confidence 57899999999999999999999998764332 2222223321 111112111000 111122
Q ss_pred h--hHHHHHHHHh---hCCCEEEEEcCCccChhhhccCCeeE
Q 002172 571 E--HKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 571 e--~K~~iV~~lq---~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+ -=...++.+. -..+-|.|+||...|+.|-++|++-.
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 2 2233344443 22356999999999999999999863
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.46 E-value=0.81 Score=48.65 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=55.6
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET---GRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~i---a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
-|+-|++.+.++.+++.|++|+++||........+ =++.|+.. +....+.+.+.. ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------Cc
Confidence 48889999999999999999999999986542222 23456642 111122111000 00
Q ss_pred eChhhHHHHHHHHhhCCC-EEEEEcCCccCh
Q 002172 568 VFPEHKYEIVKRLQARKH-ICGMTGDGVNDA 597 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDa 597 (956)
-.-+-|.+.=+.+.+.|+ +++.+||-.+|.
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 011227777777777766 788999999986
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.4 Score=54.46 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=58.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccH
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 555 (956)
-+|.|++.+++++|++.|+++.++|.= ....+..+.+..|+.. ...+.+..... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~s----d-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFPE----D-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcCc----c--
Confidence 368899999999999999999999982 1234555666666631 11111100000 0
Q ss_pred HHHhhhcceEEeeChhhH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE
Q 002172 556 DELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 556 ~~~~~~~~vfar~~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+..+| .|+.. ..+.+.+.-....+.|+||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00111 23222 1222222223367999999999999988888753
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=90.65 E-value=0.65 Score=44.79 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=34.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhC
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLG 530 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD-~~~tA~~ia~~lG 530 (956)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.36 Score=52.03 Aligned_cols=64 Identities=22% Similarity=0.229 Sum_probs=45.6
Q ss_pred ChhhHHHHHHHHhhC----CCEEEEEcCCccChhhhccC--------CeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002172 569 FPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~A--------dVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
.+.+|...++.+.++ ...+.|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+...+
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 355787777666543 34789999999999999999 4788886443 4567899884 455555444
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.15 E-value=1.4 Score=45.29 Aligned_cols=50 Identities=22% Similarity=0.355 Sum_probs=42.0
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHH---HhCC
Q 002172 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR---RLGM 531 (956)
Q Consensus 482 ~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~---~lGi 531 (956)
.+-|.+.++|..-|++.|++++|++++.+|+.+|.-..+.-..+.+ +||+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 5679999999999999999999999999999999877666555554 4565
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.75 E-value=0.81 Score=46.30 Aligned_cols=40 Identities=8% Similarity=0.029 Sum_probs=31.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCCh------------HHHHHHHHHhCCC
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 532 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 532 (956)
+-||+.++++.|++.|+++.++|.-.. .....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999996543 2345666777874
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=89.53 E-value=1.4 Score=57.52 Aligned_cols=115 Identities=16% Similarity=0.177 Sum_probs=77.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh-
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P- 570 (956)
.+.||+.+.++.|+++|+++.++|+-....+..+-+++|+.... ...++.+.+ +.+..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-Fd~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-FDAIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-CCEEEECcc-------------------cccCCCC
Confidence 36789999999999999999999999888888888888884211 112222111 112223
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccc---cHHHhhccceeecC
Q 002172 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA---TDAARSASDIVLTE 626 (956)
Q Consensus 571 -e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g---td~Ak~aADivL~~ 626 (956)
+-=.+..+.+.-....+.|+||..+|+.|-++|++= |++..+ .+.....+|+++-+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 222344555554556799999999999999999984 445432 23344567888844
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.33 E-value=0.7 Score=49.02 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=63.4
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC---CCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG---MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
.-++.||+.+++++|++.|+++.++|..+....+.+-+..+ +..- -...+ + ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--f~~~f-----d--------------~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--FSGYF-----D--------------TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--cceEE-----E--------------eCccc
Confidence 34799999999999999999999999988776665544442 2100 00000 0 00111
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002172 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
.-.|+-=..+.+.+.-....+.|+||...|+.|-++|++-..
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 112222244555555444679999999999999999998644
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.96 E-value=0.38 Score=50.81 Aligned_cols=96 Identities=11% Similarity=0.159 Sum_probs=61.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.| ++++.++|+.....+...=++.|+.... ...++.+.+... ..-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~~-----------------~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQR-----------------WKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcCC-----------------CCCChH
Confidence 5668999999988 4899999999888777776777774321 111222211100 011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
-=....+.+.-....|+|+||..+|..+=++|++-..
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2233344443334568999999999999999998764
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=88.09 E-value=0.49 Score=49.58 Aligned_cols=97 Identities=14% Similarity=0.036 Sum_probs=56.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--AKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
-++.|++.+.++.|++.|+++.++|...... ........|+... -..++...+. ....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL--FDAVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh--CCEEEEeeec-----------------CCCCC
Confidence 3678999999999999999999999865432 2222222333210 0011100000 00111
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
.|+-=..+.+.+.-....+.|+||...|+.+=++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 12222333444443445689999999999999998885
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=87.90 E-value=2.6 Score=53.69 Aligned_cols=67 Identities=9% Similarity=0.143 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHH-HhCCCeEEEEcCCChHHHHHHHH
Q 002172 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIAKETGR 527 (956)
Q Consensus 449 ~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~ia~ 527 (956)
..++.|.....|.+++-|.. +++-.....-.|-+++.+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455666666777766643 33322122235668999999997 78899999999999988776654
Q ss_pred H
Q 002172 528 R 528 (956)
Q Consensus 528 ~ 528 (956)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.60 E-value=2.8 Score=43.59 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=32.7
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002172 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
.+.+.+.+|+++|++|+.+|.-...--...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888888875
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.03 E-value=9.3 Score=43.55 Aligned_cols=44 Identities=9% Similarity=0.007 Sum_probs=34.1
Q ss_pred eEEEEeccCC--CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 002172 482 QFIGLMPLFD--PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (956)
Q Consensus 482 ~~lGli~~~D--~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia 526 (956)
+|+-++.-.| .+-++..++|++|. .|+.+.++||.......+..
T Consensus 121 TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 121 TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 5554443223 36789999999999 78999999999999888773
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=86.78 E-value=2.2 Score=43.20 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=72.2
Q ss_pred HHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC--eEEEEcCC-------ChHHHHH
Q 002172 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIAKE 524 (956)
Q Consensus 454 ~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI--~v~miTGD-------~~~tA~~ 524 (956)
+.+.|.|.+.+-... ++ ...=++.+-|+..+.+++|++.+. +|.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 678899988875443 11 013357888999999999999987 49999875 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhC-----CCEEEEEcCCc-cChh
Q 002172 525 TGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGV-NDAP 598 (956)
Q Consensus 525 ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~-----g~~V~m~GDGv-NDap 598 (956)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+-++|+||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 1 02233576666788888765 55699999974 3444
Q ss_pred h
Q 002172 599 A 599 (956)
Q Consensus 599 A 599 (956)
+
T Consensus 152 ~ 152 (168)
T PF09419_consen 152 M 152 (168)
T ss_pred H
Confidence 3
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.62 E-value=1.8 Score=44.93 Aligned_cols=95 Identities=11% Similarity=0.035 Sum_probs=56.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.|++.++++.|++.|+++.++|.-+.......- +..|+... -..++...+ +..-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEecc-------------------cCCCCC
Confidence 47899999999999999999999987655433221 11233210 001111110 011122
Q ss_pred h--hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE
Q 002172 571 E--HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 571 e--~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+ ==..+.+.+.-...-+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2 113344444444456899999999999999888853
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.47 E-value=4.2 Score=42.38 Aligned_cols=113 Identities=19% Similarity=0.213 Sum_probs=66.0
Q ss_pred CCCccHHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCC-cccc--ccCcccHHHHhhhcceEEe
Q 002172 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ-NKDE--SIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~-~~~~--~~~~~~~~~~~~~~~vfar 567 (956)
|.-|+..++|+.+++.|- .++++|--|.---..+-+..|+.+- -+.+.+.. ..|. .+.-.+.. ..+-|.+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--F~~IfTNPa~~da~G~L~v~pyH----~~hsC~~ 157 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--FSEIFTNPACVDASGRLLVRPYH----TQHSCNL 157 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--HHHHhcCCcccCCCCcEEeecCC----CCCccCc
Confidence 777999999999999996 9999998887666666666665310 00000000 0000 00000000 0122444
Q ss_pred eChh-hHHHHHHHHhhCC-------CEEEEEcCCccC-hhhhccCCeeEEec
Q 002172 568 VFPE-HKYEIVKRLQARK-------HICGMTGDGVND-APALKKADIGIAVA 610 (956)
Q Consensus 568 ~~Pe-~K~~iV~~lq~~g-------~~V~m~GDGvND-apALk~AdVGIamg 610 (956)
+-|. -|..++..++..+ ..+-++|||.|| ||.++...--+||-
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 4332 3666666665432 278899999999 58877666666664
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=84.12 E-value=2.4 Score=47.71 Aligned_cols=93 Identities=15% Similarity=0.083 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----hCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR----LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... + .+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-----------~---------------~~~~~ 84 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-----------D---------------ARSIN 84 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-----------e---------------EEEEe
Confidence 4678999999999999999999999999999988877 6653210 0 00111
Q ss_pred e--ChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002172 568 V--FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 568 ~--~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
- .|+.=.++.+.+.-.-.-+.|+||...|..+.+++..++.+-
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 1 122223334444333467999999999999999998886553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=82.69 E-value=2.5 Score=47.33 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=38.6
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 002172 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (956)
|.+--.+.+=|++.++|+.|++.|++++++|+....+...+. +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977766666 456663
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=81.76 E-value=2.7 Score=44.91 Aligned_cols=89 Identities=21% Similarity=0.184 Sum_probs=55.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~---tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
|+=|++.+.++.+++.|++|..|||.+.. ...+--++.|.... ....+.+..... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~-----------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS-----------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS-----------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc-----------------ccc
Confidence 45578999999999999999999997642 22222355675421 111121111000 000
Q ss_pred ChhhHHHHHHHHhhCCC-EEEEEcCCccChhh
Q 002172 569 FPEHKYEIVKRLQARKH-ICGMTGDGVNDAPA 599 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDapA 599 (956)
..+-|...-+.++++|+ +++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 13448888888888865 78899999999876
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.13 E-value=2.7 Score=42.92 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=60.2
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhh
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 572 (956)
+-|+ .++++.|++. +++.++||.....+...-++.|+... ...++...+.. ...-.|+-
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~--fd~i~~~~~~~-----------------~~KP~p~~ 147 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY--FDAVVAADDVQ-----------------HHKPAPDT 147 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH--ceEEEehhhcc-----------------CCCCChHH
Confidence 3344 6899999865 89999999999999988888988532 11222211110 11112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 573 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
=....+.++-....|.|+||..+|+.+=++|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 2344444544445588999999999999998875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 956 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-121 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 6e-39 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 5e-38 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-38 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 5e-37 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-24 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-24 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-24 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-24 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-21 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-21 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 1e-09 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-05 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 4e-08 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 3e-07 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-07 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 3e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 3e-06 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 7e-06 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-05 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-05 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 956 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-140 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-138 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-126 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-47 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-46 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 4e-31 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 7e-30 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-28 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-15 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 1e-23 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 1e-18 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-16 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-14 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 5e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-09 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 5e-06 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 1e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 2e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 4e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 4e-04 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 4e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 5e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 7e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1215 bits (3147), Expect = 0.0
Identities = 711/886 (80%), Positives = 788/886 (88%), Gaps = 4/886 (0%)
Query: 6 ETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKF 65
++E + E VDLE +P+EEVF+ L+C++EGL+T+ E+R+ IFG NKLEEK+ESK+LKF
Sbjct: 2 SSLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKF 61
Query: 66 LGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAA 125
LGFMWNPLSWVME AAIMAIALANG G+PPDWQDFVGI+ LL+INSTISFIEENNAGNAA
Sbjct: 62 LGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAA 121
Query: 126 AALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSAL 185
AALMA LAPK+KVLRDGKW E++AAILVPGDI+S+KLGDIIPADARLLEGDPLK+DQSAL
Sbjct: 122 AALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSAL 181
Query: 186 TGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLT 245
TGESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT
Sbjct: 182 TGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 241
Query: 246 AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
AIGNFCICSIA+GM++EIIVMYPIQ RKYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 242 AIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 301
Query: 306 HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLM 365
HRLS QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL+E+F KGV+ D V+L
Sbjct: 302 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLF 361
Query: 366 AARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRV 425
AA ASRVENQDAIDAA+VGMLADPKEARA I+EVHFLPFNP DKRTALTYID G HRV
Sbjct: 362 AAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRV 421
Query: 426 SKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIG 485
SKGAPEQIL L + +++ ++V +IIDK+AERGLRSLAVA Q VP+ KES G PW+F+G
Sbjct: 422 SKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVG 481
Query: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQN 545
L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLG +
Sbjct: 482 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTH 541
Query: 546 KDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605
KD ++ ++PV+ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKKADI
Sbjct: 542 KDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADI 601
Query: 606 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665
GIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM
Sbjct: 602 GIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 661
Query: 666 LLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLA 725
L+ALIW+FDF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF TGV+LGGY A
Sbjct: 662 LIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQA 721
Query: 726 MMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSW 785
+MTVIFFWAA++TDFF TFGV S+ D+ +L A+YLQVS ISQALIFVTR+RSW
Sbjct: 722 IMTVIFFWAAHKTDFFSDTFGVRSIR----DNNHELMGAVYLQVSIISQALIFVTRSRSW 777
Query: 786 SFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFI 845
SFV+RPG LL++AF +AQLIATLIAVYANW FA I G+GWGWAGV+WLY+++ Y PLD
Sbjct: 778 SFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVF 837
Query: 846 KFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLH 891
KF IRY LSGKAW + E + AFT KKD+GKEERE +W H
Sbjct: 838 KFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1078 bits (2789), Expect = 0.0
Identities = 303/892 (33%), Positives = 478/892 (53%), Gaps = 52/892 (5%)
Query: 9 EAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGF 68
E + V E++ +T + GL++E +R +G N+++E++E+ LKFLGF
Sbjct: 62 EEEEEATPGGGRVVPEDMLQT--DTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGF 119
Query: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAAL 128
P+ +VME AA++A L DW DF I LLL+N+ + F++E AG+ L
Sbjct: 120 FVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDEL 172
Query: 129 MASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP-LKIDQSALTG 187
+LA K+ VLRDG E +A +VPGDI+ V+ G IIPAD R++ D L++DQSALTG
Sbjct: 173 KKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTG 232
Query: 188 ESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTA 246
ESL V K GD V++ S K+GE V+ ATG +TF G+AA LV++ GHF +VL
Sbjct: 233 ESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292
Query: 247 IGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306
IG + + +++ + + + ++ L + I G+P+ +P V++ TMA+G+
Sbjct: 293 IGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA 351
Query: 307 RLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMA 366
L+ + AI ++++AIE +AG+++LCSDKTGTLT NKLS+ GVD + ++L A
Sbjct: 352 YLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTA 408
Query: 367 ARASRVENQ--DAIDAAIVGMLADPKEARANIQE---VHFLPFNPTDKRTALTYIDSEGK 421
A+ + + DAID A + L A++ + + + F PF+P K+ +G+
Sbjct: 409 CLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGE 468
Query: 422 MHRVSKGAPEQILNLVRNKS----EIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESS 477
KGAP +L V E+++ + +FA RG RSL VA +
Sbjct: 469 RITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520
Query: 478 GGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537
G W+ +G+MP DPPRHD+ +T+ A LG+++KM+TGD + IA+ET R+LG+GTN+Y
Sbjct: 521 EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYN 580
Query: 538 SSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDA 597
+ L + + V + +E ADGFA VFP+HKY +V+ LQ R ++ MTGDGVNDA
Sbjct: 581 AERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDA 639
Query: 598 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657
P+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y +Y ++++
Sbjct: 640 PSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS 699
Query: 658 IRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTG 717
I + + L I +V+ IAI D + I+ D S P W L +++
Sbjct: 700 IHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMS 759
Query: 718 VILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALI 777
V+LG LA+ T I Y ++ + ++LQ+S LI
Sbjct: 760 VLLGVVLAVGTWITVTTMYAQGENGGIV----------QNFGNMDEVLFLQISLTENWLI 809
Query: 778 FVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLI 837
F+TRA + P L A + ++AT ++ + + +W+++
Sbjct: 810 FITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDT---SIVAVVRIWIFSFG 866
Query: 838 FYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRT 889
+ + + + ++ ++ +D ++ + +K E+ QR
Sbjct: 867 IFCIMGGVYYILQDSV---GFDNLMHGKSPKGNQKQRSLEDFV---VSLQRV 912
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 443 bits (1141), Expect = e-140
Identities = 206/1029 (20%), Positives = 382/1029 (37%), Gaps = 177/1029 (17%)
Query: 2 DSKAETMEAVLKEA-VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEE-KQ 58
+ E +E + KE ++ + + E+ + + + +GLS A E L G N L +
Sbjct: 36 GKRKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRG 95
Query: 59 ESKILKFLGFMWNPLSWVMEAAAIMAIAL------ANGGGKPPDWQDFVGIVTLLLINST 112
+ +KF + L +M AA + + + + ++ ++++
Sbjct: 96 TPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155
Query: 113 ISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARL 172
+ +E + N A+ + ++ V+RDG + +A LV GD++ +K GD +PAD R+
Sbjct: 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRI 215
Query: 173 LEGDPLKIDQSALTGESLPVTK-------GPGDS---VYSGSTCKQGEIEAVVIATGVHT 222
L+ K+D S+LTGES P T+ P ++ + + C +G + +V+ TG T
Sbjct: 216 LQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRT 275
Query: 223 FFGKAAHLVDSTNQQ--------GHFQKVLTAIGNFCICSIAVGM-IVEIIVMYPIQHRK 273
G+ A L + HF ++ + IV + + Y
Sbjct: 276 IIGRIASLASGVENEKTPIAIEIEHFVDIIAGL----AILFGATFFIVAMCIGYTF---- 327
Query: 274 YRPGIDNLLV---LLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVL 330
+ ++ +++ +P + ++V +++ + RL+ + + K + A+E + V+
Sbjct: 328 ----LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVI 383
Query: 331 CSDKTGTLTLNKLSVDK---------------NLIEIFAKGVDADAVVLMAA----RASR 371
CSDKTGTLT N+++V + F + + + RA+
Sbjct: 384 CSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAF 443
Query: 372 VENQ------------DAIDAAIVGM----LADPKEARANIQEVHFLPFNPTDKR--TAL 413
Q DA + A++ L + R +V +PFN T+K +
Sbjct: 444 KSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIH 503
Query: 414 TYIDSEGKMHRV-SKGAPEQILN-----LVRNK-----SEIERRVHAIIDKFAERGLRSL 462
T D H + KGAPE++L L++ + + G R L
Sbjct: 504 TLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVL 563
Query: 463 AVAYQEVPDGRKESSGGPWQ-----------FIGLMPLFDPPRHDSAETIRRALNLGVNV 511
+ + F GL+ + DPPR + + + G+ V
Sbjct: 564 GFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRV 623
Query: 512 KMITGDQ----LAIAKETG-------RRLGMGTNMYPSSALLGQNKDESIV-------AL 553
M+TGD AIA G + + + + + V +
Sbjct: 624 IMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683
Query: 554 PVDELIEKADG-----FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
EL+E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A
Sbjct: 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVA 743
Query: 609 VADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--AVSIT-IRIVLGF 664
+ A +DAA++A+D++L + + I++ V R IF +K Y +I + L +
Sbjct: 744 MGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIY 803
Query: 665 MLLALIWKFDFP--PFMVLIIAILNDGT-------------IMTISKDRVKPSPLPDSWK 709
+ +++ P +L I + D IM + R +
Sbjct: 804 ITVSV----PLPLGCITILFIELCTDIFPSVSLAYEKAESDIMH-LRPRNPKRDRLVNEP 858
Query: 710 LAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQV 769
L + +G + ++ A + + V + + + L + Y Q
Sbjct: 859 L--AAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDS-YGQE 915
Query: 770 STISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WGW 827
T Q L + F+ + + Q+ LI S
Sbjct: 916 WTFGQRLYQQYTCYTVFFI---------SIEMCQIADVLIRKTRRLSAFQQGFFRNRILV 966
Query: 828 AGVVW---LYNLIFYIPLDFIKFFIRYALSGKAWDLVI----------EQRIAFTRKKDF 874
+V+ + + Y P F + + W + + E R R
Sbjct: 967 IAIVFQVCIGCFLCYCPG-MPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPG 1025
Query: 875 GKEERELKW 883
++EL +
Sbjct: 1026 SWWDQELYY 1034
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 438 bits (1128), Expect = e-138
Identities = 209/1017 (20%), Positives = 375/1017 (36%), Gaps = 173/1017 (17%)
Query: 12 LKEAVDLE--NVPMEEVFETLRCNKE-GLSTEAAEERLTIFGYNKLEE-KQESKILKFLG 67
LK+ V ++ + ++E+ + GL+ A+E L G N L + +KF
Sbjct: 40 LKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCR 99
Query: 68 FMWNPLSWVMEAAAIMAIAL------ANGGGKPPDWQDFVGIVTLLLINSTISFIEENNA 121
++ S ++ AI+ + V + T++++ S+ +E +
Sbjct: 100 QLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKS 159
Query: 122 GNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKID 181
+ + ++ V+RDG+ +A +V GD++ VK GD IPAD R++ K+D
Sbjct: 160 SRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVD 219
Query: 182 QSALTGESLPVTK-------GPGDS---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
S+LTGES P T+ P ++ + + C +G VV+ TG T G+ A L
Sbjct: 220 NSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLA 279
Query: 232 DSTNQQ--------GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLV 283
HF ++T + ++ +G+ I+ + Y ++ ++
Sbjct: 280 SGLEVGRTPIAIEIEHFIHIITGV------AVFLGVSFFILSLI----LGY-SWLEAVIF 328
Query: 284 ---LLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
+++ +P + ++V + + + R++ + + K + A+E + +CSDKTGTLT
Sbjct: 329 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 388
Query: 341 NKLSV-----DKNLIEI----------FAKGVDADAVVLMAA----RASRVENQ------ 375
N+++V D + E F K + + A RA Q
Sbjct: 389 NRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPIL 448
Query: 376 ------DAIDAAIVGM----LADPKEARANIQEVHFLPFNPTDKR--TALTYIDSEGKMH 423
DA ++A++ + R ++ +PFN T+K + S +
Sbjct: 449 KRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRY 508
Query: 424 RV-SKGAPEQILNL---------VRNKSEIER-RVHAIIDKFAERGLRSLAVAYQEVPDG 472
+ KGAPE+IL+ E + + G R L + +P+
Sbjct: 509 LLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPED 568
Query: 473 RKESSGGPWQ-----------FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ--- 518
+ F+GLM + DPPR + + + + G+ V M+TGD
Sbjct: 569 KYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 628
Query: 519 -LAIAKETG-------RRLGMGTNMYPSSALLGQNKDESIV-------ALPVDELIEKAD 563
AIAK G + + + ++ V L + L +
Sbjct: 629 AKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILH 688
Query: 564 G-----FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA-TDAAR 617
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ + +D ++
Sbjct: 689 YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSK 748
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--AVSIT-IRIVLGFMLLALIWKFD 674
A+D++L + + I++ V R IF +K Y +I I L F++
Sbjct: 749 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN--VPLP 806
Query: 675 FPPFMVLIIAILNDGT-------------IMTISKDRVKPSPLPDSWKLAEIFTTGVILG 721
+L I + D IM K L + ++ + ++
Sbjct: 807 LGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQ 866
Query: 722 GYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTR 781
+ +F + F P + + D W + Q T Q I
Sbjct: 867 ALGGFFS--YFVILAENGFLPM--DLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFT 922
Query: 782 ARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WGWAGVVW---LYNL 836
+ F+ + V Q +I S G+ G+ L
Sbjct: 923 CHTSFFI---------SIVVVQWADLIICKTRRNSIFQQ-GMKNKILIFGLFEETALAAF 972
Query: 837 IFYIPLDFIKFFIRYALSGKAWDLVI----------EQRIAFTRKKDFGKEERELKW 883
+ Y P Y L W E R R+ G E+E +
Sbjct: 973 LSYCPG-TDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRSPGGWVEQETYY 1028
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 405 bits (1042), Expect = e-126
Identities = 235/999 (23%), Positives = 383/999 (38%), Gaps = 193/999 (19%)
Query: 22 PMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWVMEA 79
EE + GL+ + + L +G+N+L E+ +S + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 80 AAIMAIALA---NGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKS 136
AA ++ LA G + + I+ +L+ N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 137 KVLRDGKWMEE--DAAILVPGDIISVKLGDIIPADARLL--EGDPLKIDQSALTGESLPV 192
KV R + + A +VPGDI+ V +GD +PAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 193 TKGP----------GDS---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQ-- 237
K D ++SG+ G+ +V TGV T GK + +T Q
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 238 ------GHFQKVLT-AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLV---LLIG 287
F + L+ I C+ + + ++ R I + L +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH--GGSWIRGAIYYFKIAVALAVA 306
Query: 288 GIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 347
IP +P V++ +A+G+ R++ + AI + + ++E + V+CSDKTGTLT N++SV K
Sbjct: 307 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366
Query: 348 --------------NLIEIFAKGVDADAVVLMAARASRVENQDAIDA-AIVGMLA----- 387
N I + VL + R D + A + L
Sbjct: 367 MFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL 426
Query: 388 -------------DPKEA-------RANIQEVHFLPFNPTDKRTALTYI----------- 416
+ E + N+ + ++ A +
Sbjct: 427 DFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 486
Query: 417 --DSEGKM----HRVS-------------KGAPEQILNL---VRNKSEIE-------RRV 447
+ K + KGAPE +++ VR + ++
Sbjct: 487 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKI 546
Query: 448 HAIIDKF--AERGLRSLAVAYQEVPDGRKESSGGPWQ----------FIGLMPLFDPPRH 495
++I ++ LR LA+A ++ P R+E F+G++ + DPPR
Sbjct: 547 LSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRK 606
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS--ALLGQNKDESIVAL 553
+ +I+ + G+ V MITGD A RR+G+ + A G+ D L
Sbjct: 607 EVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD----DL 662
Query: 554 PVDELIEKADG---FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
P+ E E FA V P HK +IV+ LQ+ I MTGDGVNDAPALKKA+IGIA+
Sbjct: 663 PLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722
Query: 611 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVL 662
T A++AS++VL + S I++AV RAI+ MK + Y V I + L
Sbjct: 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAAL 782
Query: 663 GFMLLALIWKFDFPPFMVLIIAILNDGT-------------IMTISKDRVKPSPLPDSWK 709
G + ALI P +L + ++ DG IM R PL W
Sbjct: 783 G-LPEALI------PVQLLWVNLVTDGLPATALGFNPPDLDIMD-RPPRSPKEPLISGWL 834
Query: 710 LAEIFTTGVILGGYLAMMTV-IFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQ 768
+ +GGY+ TV W + P H + + +
Sbjct: 835 FFRY----MAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCE 890
Query: 769 VSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WG 826
+ + + ++ L ++ N S + W
Sbjct: 891 IFEA-------PEPMTMALS---------VLVTIEMCNALNSLSENQSLMRMPPWVNIWL 934
Query: 827 WAGVVW---LYNLIFYIPLDFIKFFIRYALSGKAWDLVI 862
+ L+ LI Y+ F AL W +V+
Sbjct: 935 LGSICLSMSLHFLILYVDP-LPMIFKLKALDLTQWLMVL 972
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 2e-47
Identities = 135/535 (25%), Positives = 214/535 (40%), Gaps = 91/535 (17%)
Query: 120 NAGNAAAALMASLAPKS-KVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPL 178
G A L+ L K+ V+RDGK + + GDI+ V+ G+ IP D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 179 KIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQG 238
+D+S ++GE +PV K GD V+ + G ++ G T + LV+ + G
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVE--DAMG 312
Query: 239 H---FQKVLTAI-GNF--CICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIA 292
Q++ + F + +A I I Y I H L+ +L+ P A
Sbjct: 313 SKPPIQRLADKVVAYFIPTVLLVA---ISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCA 369
Query: 293 M----PTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKN 348
PT L+V G + + G + K A+E + + DKTGTLT K V
Sbjct: 370 FGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV--- 422
Query: 349 LIEIFAKGVDADAVVLMAARASRVENQDA--IDAAIVGMLADPKEARANIQEVHFLPFNP 406
++ D ++ +AA E + I AIV K+A H +
Sbjct: 423 -TDLVPLNGDERELLRLAAI---AERRSEHPIAEAIV------KKALE-----HGIELGE 467
Query: 407 TDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAY 466
+K + + G + + V ++K ++ VA
Sbjct: 468 PEKVEVIAGEGVVAD--GILVGNKRL---MEDFGVAVSNEVELALEKLEREAKTAVIVAR 522
Query: 467 QEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526
+GR G++ + D + + ++ +G+ V MITGD A+
Sbjct: 523 ----NGR---------VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
Query: 527 RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHI 586
R L +D +I A V P K E VK+LQA K +
Sbjct: 570 RELN------------------------LDLVI------AEVLPHQKSEEVKKLQA-KEV 598
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641
GDG+NDAPAL +AD+GIAV +D A + DIVL L +++A+ SR
Sbjct: 599 VAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 2e-46
Identities = 137/566 (24%), Positives = 224/566 (39%), Gaps = 107/566 (18%)
Query: 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPKS-KVLRDGKWMEEDAAILVPGDIISVK 161
++ LL+ T+ ++ G A L+ L K+ V+RDGK + + GDI+ V+
Sbjct: 102 LLAFLLLGRTLEARAKSRTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVR 160
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVH 221
G+ IP D ++EG+ +D+S ++GE +PV K GD V+ + G ++ G
Sbjct: 161 PGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGE 219
Query: 222 TFF------------GKA--AHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMY 267
T K L D +F + T + +A I I Y
Sbjct: 220 TLLAQIVKLVEDAMGSKPPIQRLADKVV--AYF--IPTVLL------VA---ISAFIYWY 266
Query: 268 PIQHRKYRPGIDNLLVLLIGGIPIAM----PTVLSVTMAIGSHRLSLQGAITKRMTAIEE 323
I H L+ +L+ P A PT ++T+ +G + + G + K A+E
Sbjct: 267 FIAHAPLLFAFTTLIAVLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEV 322
Query: 324 MAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDA--IDAA 381
+ + DKTGTLT K V ++ D ++ +AA E + I A
Sbjct: 323 AEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI---AERRSEHPIAEA 375
Query: 382 IVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS 441
IV K+A H + +K + + G +
Sbjct: 376 IV------KKALE-----HGIELGEPEKVEVIAGEGVVAD--GILVGNKRL---MEDFGV 419
Query: 442 EIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETI 501
+ V ++K ++ VA +G + G++ + D + + +
Sbjct: 420 AVSNEVELALEKLEREAKTAVIVAR----NG---------RVEGIIAVSDTLKESAKPAV 466
Query: 502 RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561
+ +G+ V MITGD A+ R L +D +I
Sbjct: 467 QELKRMGIKVGMITGDNWRSAEAISRELN------------------------LDLVI-- 500
Query: 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621
A V P K E VK+LQA K + GDG+NDAPAL +AD+GIAV +D A + D
Sbjct: 501 ----AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGD 555
Query: 622 IVLTEPGLSVIISAVLTSRAIFQRMK 647
IVL L +++A+ SR ++K
Sbjct: 556 IVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-32
Identities = 83/336 (24%), Positives = 128/336 (38%), Gaps = 73/336 (21%)
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQ 375
+ A E + + DKTGTLT + V +I D ++ +AA +E +
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAAS---LEAR 54
Query: 376 DA--IDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM--HRVSKGAPE 431
I AAIV +EA ++ A+ EG + R +P
Sbjct: 55 SEHPIAAAIV------EEAEK-----RGFGLTEVEEFRAIPGKGVEGIVNGRRYMVVSPG 103
Query: 432 QILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFD 491
I E+ + ++K ++G + + +G G++ L D
Sbjct: 104 YI-------RELGIKTDESVEKLKQQGKTVVFILK----NGE---------VSGVIALAD 143
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIV 551
R +S E I + +G+ M+TGD +AK LG
Sbjct: 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG--------------------- 182
Query: 552 ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611
+D+ A V P K E VK +Q + M GDGVNDAPAL +AD+GIA+
Sbjct: 183 ---LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIAIGA 232
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
TD A +DIVL + + V SR + +
Sbjct: 233 GTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 122 bits (310), Expect = 4e-31
Identities = 81/330 (24%), Positives = 127/330 (38%), Gaps = 69/330 (20%)
Query: 320 AIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDA-- 377
A+E + + DKTGTLT K V ++ D ++ +AA E +
Sbjct: 25 ALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI---AERRSEHP 77
Query: 378 IDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLV 437
I AIV K+A H + +K + + G +
Sbjct: 78 IAEAIV------KKALE-----HGIELGEPEKVEVIAGEGVVAD--GILVGNKRL---ME 121
Query: 438 RNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDS 497
+ V ++K ++ VA +GR G++ + D + +
Sbjct: 122 DFGVAVSNEVELALEKLEREAKTAVIVAR----NGR---------VEGIIAVSDTLKESA 168
Query: 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDE 557
++ +G+ V MITGD A+ R L +D
Sbjct: 169 KPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------------------LDL 204
Query: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
+I A V P K E VK+LQA K + GDG+NDAPAL +AD+GIAV +D A
Sbjct: 205 VI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAV 257
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+ DIVL L +++A+ SR ++K
Sbjct: 258 ESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 7e-30
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 30/166 (18%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 541
+ I + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 542 LGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
+ E + + PE K I+++L+ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-28
Identities = 83/333 (24%), Positives = 127/333 (38%), Gaps = 72/333 (21%)
Query: 320 AIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQD--A 377
A+E M ++ L DKTGTLT + I D + +AA +E+Q
Sbjct: 413 ALERMEKVNTLVVDKTGTLTEGHPKL----TRIVTDDFVEDNALALAAA---LEHQSEHP 465
Query: 378 IDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM--HRVSKGAPEQILN 435
+ AIV A+ L + A T G++ H V+ G +
Sbjct: 466 LANAIV------HAAKE-----KGLSLGSVEAFEAPTGKGVVGQVDGHHVAIGNARLMQE 514
Query: 436 LVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495
+ + + D+ +G + +A DG + + L+ + DP +
Sbjct: 515 HGGDNAPLF----EKADELRGKGASVMFMAV----DG---------KTVALLVVEDPIKS 557
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555
+ ETI G+ + M+TGD A+ LG +
Sbjct: 558 STPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG------------------------I 593
Query: 556 DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA 615
+++ A + PE K IV L+ + I M GDGVNDAPAL KADIGIA+ TD
Sbjct: 594 KKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV 647
Query: 616 ARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
A ++ + L L I A S + M N
Sbjct: 648 AIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 3e-15
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 122 GNAAAALMASLAPK--SKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLK 179
G+A AL+ L P+ ++ DG E + GD++ V+ G+ IP D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 180 IDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGV 220
+D+S +TGE +PV K V + + G V+ A V
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSF--VMKALHV 309
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 93.6 bits (232), Expect = 1e-23
Identities = 42/52 (80%), Positives = 47/52 (90%)
Query: 905 NKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
F ELNQ+AEEAKRRAEIAR REL+TLKGHVESVV+LKGLDI+TIQQSY +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 1e-18
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 124 AAAALMASLAPKS-KVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQ 182
A L+ L K+ V+RDGK + + GDI+ V+ G+ IP D ++EG+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 183 SALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGV 220
S ++GE +PV K GD V+ + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 75.2 bits (186), Expect = 2e-16
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 120 NAGNAAAALMASLAPKS-KVLRDGKWMEEDAAILVP------GDIISVKLGDIIPADARL 172
A A L+ SL ++ + V GDII V G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 173 LEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGV 220
+EG +D+S +TGE++PV K PG +V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 1e-14
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 17/159 (10%)
Query: 354 AKGVDADAVVLMAARASRVENQ--DAIDAAIV--GMLADPKEARANIQEVHFLPFNPTDK 409
G ++ V+ A S + + +D A++ + + Q++ +PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 410 RTALTYIDSEGKMHRVSKGAPEQILNL---VRNKSEIE-------RRVHAIIDKFAERGL 459
R ++ ++ V KGA ++ILN+ VR+ EI R++ + D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 460 RSLAVAYQEVPDGRKESSGGPWQ---FIGLMPLFDPPRH 495
R +AVA + +P + G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 5e-13
Identities = 24/30 (80%), Positives = 29/30 (96%)
Query: 927 RELNTLKGHVESVVRLKGLDIDTIQQSYTV 956
REL+TLKGHVE+VV+LKGLDI+TIQQSY +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 5e-10
Identities = 79/561 (14%), Positives = 162/561 (28%), Gaps = 165/561 (29%)
Query: 1 MDSKAETME-------AVLKEAV----DLENVP--MEEVFETLRCNKEGLSTEAAEERL- 46
MD + + +V ++A D ++V + + + ++ A
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-DHIIMSKDAVSGTL 65
Query: 47 TIFGYNKLEEKQESKILKFLGFMWNP-LSWVMEAAAIMAIALANGGGKPPDWQDFVGIVT 105
+F L KQE + KF+ + ++M + +P
Sbjct: 66 RLFW--TLLSKQEEMVQKFVEEVLRINYKFLMSP-------IKTEQRQPSM--------- 107
Query: 106 LLLINSTISFIEE-NNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGD 164
T +IE+ + N K V R +++ + L +
Sbjct: 108 -----MTRMYIEQRDRLYNDNQVF-----AKYNVSRLQPYLK-----------LRQALLE 146
Query: 165 IIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVH--T 222
+ PA L++G G G + + C +++ + +
Sbjct: 147 LRPAKNVLIDGV-----------------LGSGKTWVALDVCLSYKVQCK-MDFKIFWLN 188
Query: 223 FFGKAAHLVDSTNQQGHFQKVLTAI-GNFCI-CSIAVGMIVEIIVMYP-----IQHRKYR 275
QK+L I N+ + + + I + ++ + Y
Sbjct: 189 L-KNCNSPETVLEML---QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 276 PGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335
+ LLVLL + + + L +T R + D L + T
Sbjct: 245 ---NCLLVLL----NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATT 286
Query: 336 GTLTLNKLSV---DKNLIEIFAK--GVDAD------------AVVLMAAR----ASRVEN 374
++L+ S+ + + K + ++A + +N
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 375 -----QDAIDAAIVGMLA--DPKEARANIQEVHFLPFN---PTDKRTALTYIDSEGKMHR 424
D + I L +P E R + P + PT +L + D
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT-ILLSLIWFDVI----- 400
Query: 425 VSKGAPEQILNLVRNKSEIERR-------VHAIIDKFA-----ERGL-RSLAVAYQEVPD 471
K ++N + S +E++ + +I + E L RS+ Y +P
Sbjct: 401 --KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN-IPK 457
Query: 472 GRKESSGGP-------WQFIG 485
P + IG
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIG 478
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 4e-09
Identities = 94/623 (15%), Positives = 178/623 (28%), Gaps = 183/623 (29%)
Query: 441 SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKE--SS-------GGPWQFIGLMPLFD 491
E + + I+ F + + + ++V D K S G + LF
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDC--KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 492 PPRHDSAETIRRALN--LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDES 549
E +++ + L +N K + I E R+ M T MY N ++
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMS---PIKTEQ-RQPSMMTRMYIEQRDRLYNDNQV 125
Query: 550 IVALPVDELIEKADGFAGVFPEHKYEIVKRL-QARKH----ICGMTGDG--------VND 596
V + ++ + L + R I G+ G G
Sbjct: 126 FAKYNVSR------------LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 597 APALKKADIGI---AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653
K D I + + S ++ L I TSR+ N +
Sbjct: 174 YKVQCKMDFKIFWLNLKN----CNSPETVLEMLQKLLYQIDPNWTSRS--DHSSNIKLRI 227
Query: 654 VSITIRIVLGFM-------LLAL-------IWK-FDFP-PFMVL-----IIAILNDGTIM 692
SI + LL L W F+ ++ + L+ T
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 693 TISKD-------------------RVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIF-F 732
IS D +P LP +I + +
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII-AESIRDGLATWDN 346
Query: 733 WAAYQTDFFPRTFGVSSLHEKDIDDWKKL--ASAIYLQVSTISQALI------------- 777
W D SSL+ + +++K+ +++ + I L+
Sbjct: 347 WKHVNCDKLTTIIE-SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 778 -FVTRARSWSFVDR---------PGLLLVLAFAVAQLIA---TLIAVYA------NWSFA 818
V + +S V++ P + L L + A +++ Y +
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
Query: 819 AIEGVGWGWAGVVWLYNLIFY----------------IPLD--FIKFFIRYALSGKAW-- 858
+ Y+ I + + LD F++ IR+ AW
Sbjct: 466 PPYLDQ-------YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH--DSTAWNA 516
Query: 859 -----DLVIEQRI--AFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELN 911
+ + + + + D K ER + L L + + +K+T+L
Sbjct: 517 SGSILNTLQQLKFYKPYICDND-PKYERLVN-----AILDFLPKIEENLI--CSKYTDLL 568
Query: 912 QMA---------EEAKRRAEIAR 925
++A EEA + ++ R
Sbjct: 569 RIALMAEDEAIFEEAHK--QVQR 589
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 5e-06
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
K V + + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 627 PG 628
G
Sbjct: 142 SG 143
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
I A N G+ V ++TG++ I + +L + ++ Q + + A +EL
Sbjct: 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLKV-DYLF-------QGVVDKLSAA--EELCN 89
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
+ G+ E GD +NDA LK+ I A A R S
Sbjct: 90 E----LGINLEQ--------------VAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLS 131
Query: 621 DIVLTEPG 628
I L + G
Sbjct: 132 TIFLEKRG 139
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
IR AL + V +ITG + + ++ LG+ T++Y Q + ++A +L+E
Sbjct: 62 IRCALTSDIEVAIITGRKAKLVEDRCATLGI-THLY-------QGQSNKLIAF--SDLLE 111
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
K + PE+ GD + D P ++K + +AVADA +
Sbjct: 112 K----LAIAPEN--------------VAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRA 153
Query: 621 DIVLTEPG 628
D V G
Sbjct: 154 DYVTRIAG 161
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
I+ + GV +I+G + AI + + LG+ +++ Q +++ +V L D+L+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLF-------QGREDKLVVL--DKLLA 104
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
+ + E GD + D P +++ +G+AVA+A R +
Sbjct: 105 E----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146
Query: 621 DIVLTEPG 628
+ G
Sbjct: 147 HGITRAQG 154
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
I+ +G+ + +I+G A + LG+ +Y + + +++ E
Sbjct: 45 IKLLQKMGITLAVISGRDSAPLITRLKELGV-EEIY-------TGSYKKLEIY--EKIKE 94
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
K + E G GD V D +KK +AV +A + R +
Sbjct: 95 K----YSLKDEE--------------IGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVA 136
Query: 621 DIVLTEPG 628
+ G
Sbjct: 137 VYITQRNG 144
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
I+ ++ + V +++G I + LG+ + K E A +L++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFF-------LGKLEKETAC--FDLMK 93
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
+ AGV E GD D PA AVADA ++A
Sbjct: 94 Q----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135
Query: 621 DIVLTEPG 628
D VL+ G
Sbjct: 136 DHVLSTHG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ K +K+ + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 627 PG 628
PG
Sbjct: 145 PG 146
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
++ +N G+ + +ITG + I + + LG+ + +Y Q +D+ + A ++ +
Sbjct: 61 VKALMNAGIEIAIITGRRSQIVENRMKALGI-SLIY-------QGQDDKVQAY--YDICQ 110
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
K + PE G GD + D P ++K + + VAD +
Sbjct: 111 K----LAIAPEQ--------------TGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRA 152
Query: 621 DIVLTEPG 628
+ V G
Sbjct: 153 NYVTHIKG 160
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
IR + ++V +ITG + + ++ LG+ T++Y Q + + +VA EL+
Sbjct: 85 IRCLITSDIDVAIITGRRAKLLEDRANTLGI-THLY-------QGQSDKLVAY--HELLA 134
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
PE GD + D P + + + +AVADA +
Sbjct: 135 T----LQCQPEQ--------------VAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKA 176
Query: 621 DIVLTEPG 628
V G
Sbjct: 177 HYVTRIKG 184
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 28/128 (21%)
Query: 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560
++ + G+ V +IT Q A+ +LG+ T+ Y + + + A L +
Sbjct: 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGI-THYY-------KGQVDKRSAY--QHLKK 104
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620
G+ + GD + D P +++ +G+AV++A +
Sbjct: 105 T----LGLNDDE--------------FAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFA 146
Query: 621 DIVLTEPG 628
D G
Sbjct: 147 DWRTERTG 154
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 17/110 (15%), Positives = 29/110 (26%), Gaps = 6/110 (5%)
Query: 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDEL 558
E + + +I+G + +Y + A +
Sbjct: 84 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 143
Query: 559 IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
G K ++ L M GD V D A K +D+ A
Sbjct: 144 CSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 624 LTEPGLSVII 633
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Length = 156 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 4e-04
Identities = 28/138 (20%), Positives = 51/138 (36%), Gaps = 19/138 (13%)
Query: 335 TGTLTL-NKLSVDKNLIEIF--AKGVDADAVVLMAARASRVENQDAIDAAIV---GMLAD 388
+G N+ + + F A+GVD + A AS + +IV +
Sbjct: 14 SGHGGRHNRQASE------FIPAQGVDEKTLADAAQLASLADETP-EGRSIVILAKQRFN 66
Query: 389 PKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIERRV 447
+E F+PF ++ ++ I+ + + KG+ + I V N V
Sbjct: 67 LRERDVQSLHATFVPFTA---QSRMSGINIDN--RMIRKGSVDAIRRHVEANGGHFPTDV 121
Query: 448 HAIIDKFAERGLRSLAVA 465
+D+ A +G L V
Sbjct: 122 DQKVDQVARQGATPLVVV 139
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 5e-04
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ K EI++++ + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 624 LTEPGLSVII 633
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
V + K +I+ L + + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 624 LTEPGLSVII 633
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 7e-04
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ +K + + L AR +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 624 LTEPGLSVII 633
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.95 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.94 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.93 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.88 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.78 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.39 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.26 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 99.21 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.17 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.16 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 99.14 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.13 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.08 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.03 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.92 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.88 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.85 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.8 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.75 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.67 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.66 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.65 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.59 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.59 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.59 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.57 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.52 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.45 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.44 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.44 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.43 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.43 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.39 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.39 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.38 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.35 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.34 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.29 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.28 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.23 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.22 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.17 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.17 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.14 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.12 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.12 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.06 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.03 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.0 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.99 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.97 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.96 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.96 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.96 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.95 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.94 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.94 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.93 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.93 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.9 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.87 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.86 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.85 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.84 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.84 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.84 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.83 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.82 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.82 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.79 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.77 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.74 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.72 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.7 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.63 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.61 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.6 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.59 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.58 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.57 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.54 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.54 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.54 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.54 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.54 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.52 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.52 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.52 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.51 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.47 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.47 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.45 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.44 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.4 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.39 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.38 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.37 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.35 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.31 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.3 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.23 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.16 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.98 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.94 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.88 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.8 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.73 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.71 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.61 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.36 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.35 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.34 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.2 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.19 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.07 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.03 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.0 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.93 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.85 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.81 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.8 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.79 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 95.66 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.36 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.23 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.65 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.51 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.22 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.08 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.19 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 93.05 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 92.81 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 92.46 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.21 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 91.36 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.62 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.16 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 86.68 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 86.19 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 85.96 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 85.56 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 81.48 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 80.57 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-151 Score=1402.04 Aligned_cols=877 Identities=81% Similarity=1.265 Sum_probs=744.0
Q ss_pred cHHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 002172 7 TMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIA 86 (956)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~ 86 (956)
++|+..++..|+|++|.+|++++|+++.+|||++|+++|+++||+|++++++++.|+.|++||+||+.|+|+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~ 82 (885)
T 3b8c_A 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIA 82 (885)
T ss_dssp ---------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGG
T ss_pred chhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47788889999999999999999999989999999999999999999999888889999999999999999999999998
Q ss_pred HhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCee
Q 002172 87 LANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDII 166 (956)
Q Consensus 87 ~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~V 166 (956)
++..++.+.+|.++++|+++++++..++++||+|+++++++|+++.+++++|+|||++++|++++|||||+|.|++||+|
T Consensus 83 l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 83 LANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp SSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
Confidence 87655556689999999989999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceEEeecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcccccchHHHHHHH
Q 002172 167 PADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTA 246 (956)
Q Consensus 167 PaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~ 246 (956)
||||+|++|++++||||+|||||.||.|.+||.+|+||.|.+|+++++|++||.+|++||+++++++..+++|+|+.+++
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHH
T ss_pred eeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHH
Confidence 99999999998899999999999999999999999999999999999999999999999999999877778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcC
Q 002172 247 IGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAG 326 (956)
Q Consensus 247 i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~ 326 (956)
++.+++..+++++++.+++.|...+.+|.+.+..++++++++|||+||+++++++++|+.+|+|+|+++|+++++|+||+
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhC
Confidence 98875544444333333444444456788899999999999999999999999999999999999999999999999999
Q ss_pred ceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCC
Q 002172 327 MDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNP 406 (956)
Q Consensus 327 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s 406 (956)
+|+||||||||||+|+|+|.+..++.+..+.++++++.+++.|+...++||++.|++.++.++.+.+..++.++++||+|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNP 402 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCT
T ss_pred CCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCc
Confidence 99999999999999999998644344445677888888888888766789999999998876555556788899999999
Q ss_pred CCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEE
Q 002172 407 TDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGL 486 (956)
Q Consensus 407 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGl 486 (956)
.+|||++++++.+|+.+.++|||||.++++|+..++.++++.+.+++++++|+|++++|++++++.+.+..|++++|+|+
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGl 482 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEE
T ss_pred ccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEE
Confidence 99999998877778888899999999999998655556678888999999999999999999887766777899999999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002172 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
++++||||||++++|++|+++||+|+|+||||+.||.++|+++||..+..+...+.|.+.+..+++.++++++++++|||
T Consensus 483 i~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562 (885)
T ss_dssp EEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE
T ss_pred EEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEE
Confidence 99999999999999999999999999999999999999999999976655566788888776678889999999999999
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHH
Q 002172 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i 646 (956)
|++|+||.++|+.||++|++|+|||||+||+||||+|||||||++|+|+||++||+|+++|+|++|+.++++||++|+||
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni 642 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHhhcccccccccCCCCCCCCCCccchHHHHHHHHHHHHHHHH
Q 002172 647 KNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAM 726 (956)
Q Consensus 647 ~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p~~~l~i~~~~d~~~~~l~~d~~~p~~~p~~~~~~~~~~~~~~~G~~~~~ 726 (956)
+||+.|++++|+..++.+++..++|+++++|++++|+++++|++++++++|+++|+++|++|.+++++..+++.|+++++
T Consensus 643 ~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~ 722 (885)
T 3b8c_A 643 KNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722 (885)
T ss_dssp HHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999987776666666788999999999999999999999999999999999999998889899999999999
Q ss_pred HHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHHHHH
Q 002172 727 MTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIA 806 (956)
Q Consensus 727 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~ 806 (956)
.++++|++++..++++..+|.+...++.. +..+++|+++++++|+++|++|+++++++++|+.++++++++.+++.
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~ 798 (885)
T 3b8c_A 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNH----ELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIA 798 (885)
T ss_dssp HHTTSSSCTTTTTTTTCCCCSSCCGGGTH----HHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTT
T ss_pred HHHHHHHHHHHcCccccccCcccccchHH----HHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHH
Confidence 99888877665555444344322211122 45577788888888888899999999999999877777666665666
Q ss_pred HHHHHhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHhhhhhhcccccCChhHHHHHHHHh
Q 002172 807 TLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHA 886 (956)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 886 (956)
+++++|.++.|+.+.+++|.||+++|+++++++++.|+.|++.|+.+++++|.+.+++|.+++++++++++.|+.+|+.+
T Consensus 799 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (885)
T 3b8c_A 799 TLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRG 878 (885)
T ss_dssp TSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC----------------------------------
T ss_pred HHHHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHhhhhccccccccchhccccccccccccc
Confidence 66667766666668899999999999999999999999999999999999999999999999999999999999999866
Q ss_pred h
Q 002172 887 Q 887 (956)
Q Consensus 887 ~ 887 (956)
.
T Consensus 879 ~ 879 (885)
T 3b8c_A 879 S 879 (885)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-131 Score=1227.36 Aligned_cols=803 Identities=37% Similarity=0.609 Sum_probs=677.6
Q ss_pred HHHcCCC-CCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHH
Q 002172 27 FETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVT 105 (956)
Q Consensus 27 ~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~ 105 (956)
.+.|+++ .+|||++|+++|+++||+|++++++++.|..|+++|++|++++|++++++++++ ++|.++++|++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~-------g~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTC-------SCSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhHHHHHHHHH
Confidence 3457876 579999999999999999999988899999999999999999999999998876 48999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCC-ceeeccc
Q 002172 106 LLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP-LKIDQSA 184 (956)
Q Consensus 106 ~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~-l~VDeS~ 184 (956)
+++++++++++||+++++++++|+++.+++++|+|||++++|++++|||||+|.|++||+|||||+|++|++ +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996 8999999
Q ss_pred cCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 185 LTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEI 263 (956)
Q Consensus 185 LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~ 263 (956)
|||||.||.|.+||.+|+||.+.+|.++++|++||.+|++||+++++++. .+++|+|+.+++++.+++.++++.+++.+
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877 56899999999998876544333322222
Q ss_pred HhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCce
Q 002172 264 IVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 343 (956)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m 343 (956)
+.+...+.++...+..++++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 310 -~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 310 -VSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp -HTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred -HHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 2222334567778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeeeeeccCCCCHHHHHHHHHHhcccccc--ChHHHHHHHhcCC---hHHHhhccceeEeecCCCCCcceEEEEEcC
Q 002172 344 SVDKNLIEIFAKGVDADAVVLMAARASRVENQ--DAIDAAIVGMLAD---PKEARANIQEVHFLPFNPTDKRTALTYIDS 418 (956)
Q Consensus 344 ~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~--~~i~~ai~~~~~~---~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~ 418 (956)
+|.+++. ..+.++++++..++.|+...+. ||++.|++..+.+ .......++.++++||+|.+|+|++++++.
T Consensus 389 ~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~ 465 (920)
T 1mhs_A 389 SLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP 465 (920)
T ss_dssp CCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCS
T ss_pred eEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeC
Confidence 9987542 1245556666666666554444 9999999886421 112235678899999999999999988777
Q ss_pred CCcEEEEEeCcHHHHHHhhcC----chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCC
Q 002172 419 EGKMHRVSKGAPEQILNLVRN----KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR 494 (956)
Q Consensus 419 ~g~~~~~~KGa~e~il~~~~~----~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR 494 (956)
+|+.+.++|||||.++++|+. .++.++.+.+.+++|+++|+||+++|++. .|++|+|+|+++++||||
T Consensus 466 ~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R 537 (920)
T 1mhs_A 466 QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPR 537 (920)
T ss_dssp SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCC
T ss_pred CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEecccc
Confidence 788888999999999999975 34556778889999999999999999984 257899999999999999
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccccCCccccccCcccHHHHhhhcceEEeeChhh
Q 002172 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (956)
Q Consensus 495 ~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 572 (956)
||++++|++|+++||+|+|+||||+.||.+||+++||..+.+ ...++.|. ..+++.++.+.+++.+||||++|+|
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 999999999999999999999999999999999999964321 12234444 2466778888899999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002172 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (956)
Q Consensus 573 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~ 652 (956)
|.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||++||+|+++|+|++|+.++++||++|+||++++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHhhcccccccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q 002172 653 AVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFF 732 (956)
Q Consensus 653 ~~~~ni~~vl~~~~~~~~~~~~~~p~~~l~i~~~~d~~~~~l~~d~~~p~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~f 732 (956)
.++.|+...+.+.....+++++++|++++|+++++|++.+++++|+.++.++|++|+.++++..+++.|+++++.+++.|
T Consensus 695 ~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~ 774 (920)
T 1mhs_A 695 RIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITV 774 (920)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999986544444445567789999999999999998899999998777788888887777777889999998887776
Q ss_pred HHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHHHHHHHHHHh
Q 002172 733 WAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVY 812 (956)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 812 (956)
++.+..+ ...+ ...... +..+++|.++++...+++|++|+.+++|...+++++++++++.+++.++++++
T Consensus 775 ~~~~~~~---~~~~---~~~~~~----~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (920)
T 1mhs_A 775 TTMYAQG---ENGG---IVQNFG----NMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIW 844 (920)
T ss_dssp HHHTTTT---TTCC---SSSSSS----SHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHhc---cccc---ccchhh----HHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHh
Confidence 6544210 0001 001111 34455555554444457789999877665567788888877777776666543
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHhhhhh
Q 002172 813 ANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIA 867 (956)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~ 867 (956)
+ ++...+++|.+|+.+|+++++++++.|+.|++.++. +.|++..+.|..
T Consensus 845 ~---~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~---~~fd~~~~~~~~ 893 (920)
T 1mhs_A 845 G---WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS---VGFDNLMHGKSP 893 (920)
T ss_dssp S---STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC---CTTHHHHHHHST
T ss_pred h---hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHhccCcc
Confidence 3 556789999999999999999999999999876654 346655554444
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-125 Score=1197.16 Aligned_cols=845 Identities=22% Similarity=0.345 Sum_probs=676.0
Q ss_pred ccHHHhhccc-cccccCCHHHHHHHcCCCC-CCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHH
Q 002172 6 ETMEAVLKEA-VDLENVPMEEVFETLRCNK-EGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAI 82 (956)
Q Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aai 82 (956)
-+++..++|. .+||.++.+|++++|+++. +|||++||++|+++||+|++++++ .+.|.+|++||++|++++|+++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~ 119 (1034)
T 3ixz_A 40 EKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAA 119 (1034)
T ss_pred hhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHH
Confidence 3577788886 7899999999999999995 799999999999999999998766 578889999999999999999999
Q ss_pred HHHHHhc---CCCC---CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCc
Q 002172 83 MAIALAN---GGGK---PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGD 156 (956)
Q Consensus 83 ls~~~~~---~~~~---~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGD 156 (956)
++++.+. ..+. ...|+++++|++++++|++++++||+|+++++++|+++.+++++|+|||++++|++++|||||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GD 199 (1034)
T 3ixz_A 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGD 199 (1034)
T ss_pred HHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCc
Confidence 9887642 1111 134777888888899999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCC----------CccccCCeeccCcEEEEEEEecchhHHHh
Q 002172 157 IISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG----------DSVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (956)
Q Consensus 157 iV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g----------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gk 226 (956)
+|.|++||+|||||+|++|+++.||||+|||||.||.|.++ |++|+||.|.+|+++++|++||.+|++||
T Consensus 200 iV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~Gk 279 (1034)
T 3ixz_A 200 LVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGR 279 (1034)
T ss_pred EEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhH
Confidence 99999999999999999999889999999999999999874 56899999999999999999999999999
Q ss_pred HHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 002172 227 AAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (956)
Q Consensus 227 i~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~ 305 (956)
+++++++. .+++|+|+.+++++.++..++++..++ +++.+...+.+|.+.+..++++++++|||+||+++++++++|+
T Consensus 280 I~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~ 358 (1034)
T 3ixz_A 280 IASLASGVENEKTPIAIEIEHFVDIIAGLAILFGAT-FFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA 358 (1034)
T ss_pred HHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHH
Confidence 99999876 678999999999987754433322222 2222334456788888999999999999999999999999999
Q ss_pred HHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCC-----------C-----CHHHHHHHHHHh
Q 002172 306 HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKG-----------V-----DADAVVLMAARA 369 (956)
Q Consensus 306 ~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~-----------~-----~~~~~l~~aa~~ 369 (956)
+||+++|++||+++++|+||++|+||||||||||+|+|+|.++++...... . ....++..++.|
T Consensus 359 ~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc 438 (1034)
T 3ixz_A 359 KRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLC 438 (1034)
T ss_pred HHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998764211000 0 012455556666
Q ss_pred ccc---------------cccChHHHHHHHhcC----ChHHHhhccceeEeecCCCCCcceEEEEEcC---CCcEEEEEe
Q 002172 370 SRV---------------ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDS---EGKMHRVSK 427 (956)
Q Consensus 370 ~~~---------------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~K 427 (956)
+.. ..+||.|.|++.+.. +....+..++.++.+||+|++|+|++++... +|+.+.++|
T Consensus 439 ~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~K 518 (1034)
T 3ixz_A 439 NRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMK 518 (1034)
T ss_pred ccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEe
Confidence 432 124788999877642 3344567789999999999999998877643 367889999
Q ss_pred CcHHHHHHhhcC----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc-----------cCCCCCceEEEE
Q 002172 428 GAPEQILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-----------ESSGGPWQFIGL 486 (956)
Q Consensus 428 Ga~e~il~~~~~----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~-----------~~~e~~l~~lGl 486 (956)
||||.|+++|+. +++.++.+.+.+++|+.+|+|||++||+.+++++. +..|++|+|+|+
T Consensus 519 GApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGl 598 (1034)
T 3ixz_A 519 GAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGL 598 (1034)
T ss_pred CChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEE
Confidence 999999999973 34567788999999999999999999999865321 234789999999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccCC
Q 002172 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLGQ 544 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~g~ 544 (956)
++++||||++++++|++|+++||+|+|+|||++.+|.++|+++||..+... ..++.|.
T Consensus 599 v~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 599 VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM 678 (1034)
T ss_pred EeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence 999999999999999999999999999999999999999999999643210 1133343
Q ss_pred ccccccCcccHHHHhhhcc--eEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccc
Q 002172 545 NKDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASD 621 (956)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aAD 621 (956)
+.+ .+.+.++.+.+.+.. +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||
T Consensus 679 ~l~-~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD 757 (1034)
T 3ixz_A 679 QLK-DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAAD 757 (1034)
T ss_pred hhh-hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcC
Confidence 333 234455666666654 99999999999999999999999999999999999999999999999 99999999999
Q ss_pred eeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCChHHHHHHHHhhccc-ccccccCCC
Q 002172 622 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDGT-IMTISKDRV 699 (956)
Q Consensus 622 ivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~-~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~ 699 (956)
+|+.++++++|+.+|++||++|+|++|++.|.+++|+..++.++++.+ .+++|++|+|++|+|+++|++ .+++++|++
T Consensus 758 ~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~ 837 (1034)
T 3ixz_A 758 MILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKA 837 (1034)
T ss_pred EEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999999999998877666544 457799999999999999986 689998886
Q ss_pred C------CCCCCC-c-cchHHHHHH-HHHHHHHHHHHHHHHHHHHHh-cCcCCc-ccCccc---------CCCCchhhH-
Q 002172 700 K------PSPLPD-S-WKLAEIFTT-GVILGGYLAMMTVIFFWAAYQ-TDFFPR-TFGVSS---------LHEKDIDDW- 758 (956)
Q Consensus 700 ~------p~~~p~-~-~~~~~~~~~-~~~~G~~~~~~~~~~f~~~~~-~~~~~~-~~~~~~---------~~~~~~~~~- 758 (956)
. ||++|+ . ...+.++.. ++..|+++++.+++.|++.+. .++.+. .+|... ..+.....|
T Consensus 838 ~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1034)
T 3ixz_A 838 ESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWT 917 (1034)
T ss_pred ChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccc
Confidence 3 333342 2 223344444 445699888888877665543 222211 111110 000000000
Q ss_pred -------HHHHHHHHHHHHHHHHH-HHHHHhcCCCccccC---hhHHHHHHHHHHHHHHHHHHHhcc--ccccccCchhH
Q 002172 759 -------KKLASAIYLQVSTISQA-LIFVTRARSWSFVDR---PGLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGVGW 825 (956)
Q Consensus 759 -------~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 825 (956)
....++++|...+++|+ .+|++|+++.++++. .|.+++++++++.++.. +..|.+ -.++...+++|
T Consensus 918 ~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~-~~~~~p~~~~~f~~~~l~~ 996 (1034)
T 3ixz_A 918 FGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGC-FLCYCPGMPNIFNFMPIRF 996 (1034)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHH-HHHHhhhHHHHhcCCCCCH
Confidence 01244556666677776 679999977665542 35566555554433332 223332 13456778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002172 826 GWAGVVWLYNLIFYIPLDFIKFFIRYAL 853 (956)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 853 (956)
.+|+++++++++.++++|+.|++.|++.
T Consensus 997 ~~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1024 (1034)
T 3ixz_A 997 QWWLVPMPFGLLIFVYDEIRKLGVRCCP 1024 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999988764
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-125 Score=1193.96 Aligned_cols=840 Identities=22% Similarity=0.351 Sum_probs=671.5
Q ss_pred Hhhccc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 002172 10 AVLKEA-VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIA 86 (956)
Q Consensus 10 ~~~~~~-~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~ 86 (956)
..++|. ++||.++.+|++++|+++ .+|||++||++|+++||+|++++++ .+.|..|++||++|++++|+++++++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~ 118 (1028)
T 2zxe_A 39 ELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFL 118 (1028)
T ss_dssp TTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHH
T ss_pred HHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 333433 689999999999999998 5899999999999999999999875 7888999999999999999999999988
Q ss_pred HhcCC---CC---CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEE
Q 002172 87 LANGG---GK---PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISV 160 (956)
Q Consensus 87 ~~~~~---~~---~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l 160 (956)
++... +. ..+|+++++|+++++++++++++||+|+++++++|+++.+++++|+|||++++|++++|||||+|.|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l 198 (1028)
T 2zxe_A 119 AYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEV 198 (1028)
T ss_dssp HHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEE
T ss_pred HHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEE
Confidence 74211 11 1257778888889999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCeeecceEEeecCCceeeccccCCcCeeeecCCCC----------ccccCCeeccCcEEEEEEEecchhHHHhHHHh
Q 002172 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGD----------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHL 230 (956)
Q Consensus 161 ~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~----------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l 230 (956)
++||+|||||+|++|++++||||+|||||.||.|.+++ ++|+||.|.+|.++++|++||.+|.+||++++
T Consensus 199 ~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~ 278 (1028)
T 2zxe_A 199 KGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATL 278 (1028)
T ss_dssp ETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHH
T ss_pred CCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHh
Confidence 99999999999999987899999999999999999876 59999999999999999999999999999999
Q ss_pred hhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHH
Q 002172 231 VDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (956)
Q Consensus 231 ~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~ 309 (956)
+.+. .+++|+|+.+++++.++..+.++.+++.+++ +.+.+.+|...+..++++++++|||+||+++++++++|+++|+
T Consensus 279 ~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ma 357 (1028)
T 2zxe_A 279 ASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 357 (1028)
T ss_dssp HHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHh
Confidence 9876 6789999999999887554333322222222 2223456777888889999999999999999999999999999
Q ss_pred hCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee--cc-CC-----------CCH--HHHHHHHHHhccc-
Q 002172 310 LQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI--FA-KG-----------VDA--DAVVLMAARASRV- 372 (956)
Q Consensus 310 ~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~-~~-----------~~~--~~~l~~aa~~~~~- 372 (956)
++|++||+++++|+||++|+||||||||||+|+|+|.++++.. +. .+ .++ +.++.+++.|+..
T Consensus 358 k~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~ 437 (1028)
T 2zxe_A 358 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAV 437 (1028)
T ss_dssp TTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCE
T ss_pred hCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCe
Confidence 9999999999999999999999999999999999999876421 10 00 011 2456667776421
Q ss_pred --------------cccChHHHHHHHhcC----ChHHHhhccceeEeecCCCCCcceEEEEEcC---CCcEEEEEeCcHH
Q 002172 373 --------------ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDS---EGKMHRVSKGAPE 431 (956)
Q Consensus 373 --------------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KGa~e 431 (956)
..+||.|.|++.++. +....+..++.++.+||+|.+|||+++++.. +|+.+.++|||||
T Consensus 438 ~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e 517 (1028)
T 2zxe_A 438 FQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPE 517 (1028)
T ss_dssp ECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHH
T ss_pred eecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcH
Confidence 124888999987753 3334466789999999999999999998853 5778899999999
Q ss_pred HHHHhhcC----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc-----------cCCCCCceEEEEeccC
Q 002172 432 QILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-----------ESSGGPWQFIGLMPLF 490 (956)
Q Consensus 432 ~il~~~~~----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~-----------~~~e~~l~~lGli~~~ 490 (956)
.|+++|.. +++.++++.+.+++|+++|+|||++||+.+++.+. +..|.+++|+|+++++
T Consensus 518 ~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~ 597 (1028)
T 2zxe_A 518 RILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMI 597 (1028)
T ss_dssp HHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEE
T ss_pred HHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccC
Confidence 99999974 24567788899999999999999999999865321 2247899999999999
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccCCcccc
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLGQNKDE 548 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~g~~~~~ 548 (956)
||||||++++|++|+++||+|+|+|||++.||.++|++|||..+... ..+++|.+.+.
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 99999999999999999999999999999999999999999743211 12334433332
Q ss_pred ccCcccHHHHhhhcc--eEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeec
Q 002172 549 SIVALPVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLT 625 (956)
Q Consensus 549 ~~~~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~ 625 (956)
+.+.++++++.+++ +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++||+|++
T Consensus 678 -~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~ 756 (1028)
T 2zxe_A 678 -LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILL 756 (1028)
T ss_dssp -CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEET
T ss_pred -CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEec
Confidence 34556777777776 99999999999999999999999999999999999999999999999 799999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCChHHHHHHHHhhccc-ccccccCCCCC--
Q 002172 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDGT-IMTISKDRVKP-- 701 (956)
Q Consensus 626 ~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~-~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~p-- 701 (956)
+++|++|+.++++||++|+|+++++.|.+++|+..++.++++.+ ..+.+++|+|++|+|+++|++ .+++++|++.+
T Consensus 757 ~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~ 836 (1028)
T 2zxe_A 757 DDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDI 836 (1028)
T ss_dssp TCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhh
Confidence 99999999999999999999999999999999988777665544 456899999999999999975 68888887633
Q ss_pred ----CCCCC--ccchHHHHHH-HHHHHHHHHHHHHHHHHHHHh-cCcCCc-ccCc---------ccCCCCchh-------
Q 002172 702 ----SPLPD--SWKLAEIFTT-GVILGGYLAMMTVIFFWAAYQ-TDFFPR-TFGV---------SSLHEKDID------- 756 (956)
Q Consensus 702 ----~~~p~--~~~~~~~~~~-~~~~G~~~~~~~~~~f~~~~~-~~~~~~-~~~~---------~~~~~~~~~------- 756 (956)
|++|+ +...++.+.. ++..|+++++++++.|++.+. .++.+. .+|. ....++...
T Consensus 837 m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1028)
T 2zxe_A 837 MKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQR 916 (1028)
T ss_dssp GGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHH
T ss_pred hccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhh
Confidence 22222 2223344444 457799999888876665432 121100 0000 000000000
Q ss_pred -hHHHHHHHHHHHHHHHHHH-HHHHHhcCCCcccc--ChhHHHHHHHHHHHHHHHHHHHhcc--ccccccCchhHHHHHH
Q 002172 757 -DWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD--RPGLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGVGWGWAGV 830 (956)
Q Consensus 757 -~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 830 (956)
......++++|...+++|. .+|++|+++.+++. .+|.++++++++..++..++ .|.+ -.++.+.+++|.+|++
T Consensus 917 ~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~ 995 (1028)
T 2zxe_A 917 KIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFL-SYCPGTDVALRMYPLKPSWWFC 995 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHH-HHSTTHHHHTCCCCCCGGGGGT
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHH-HHhhhHHhhhcCCCCCHHHHHH
Confidence 0011344556666666675 67899998766443 35666666665554444333 3432 1244567778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 002172 831 VWLYNLIFYIPLDFIKFFIRYA 852 (956)
Q Consensus 831 ~~~~~~~~~~~~~~~K~~~r~~ 852 (956)
++++++++++..++.|++.|++
T Consensus 996 ~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 996 AFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp THHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHcc
Confidence 8899999999999999988764
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-121 Score=1164.29 Aligned_cols=837 Identities=25% Similarity=0.346 Sum_probs=658.8
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--
Q 002172 16 VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG-- 91 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~-- 91 (956)
-+||.++.+|++++|+++ .+|||++|+++|+++||+|++++++ ++.|..|++||++|++++++++++++++++...
T Consensus 3 ~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~ 82 (995)
T 3ar4_A 3 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 82 (995)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred chhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 479999999999999998 5699999999999999999999865 688889999999999999999999999986432
Q ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCe--EEEEeccCcCCCcEEEEeCCCeeec
Q 002172 92 -GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGK--WMEEDAAILVPGDIISVKLGDIIPA 168 (956)
Q Consensus 92 -~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~--~~~I~~~~LvpGDiV~l~~Gd~VPa 168 (956)
+...+|.+.++|++++++++.++++||+|+++++++|+++.+++++|+|||+ +++|+++||||||+|.|++||+|||
T Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 83 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 1123788888888889999999999999999999999999999999999987 6999999999999999999999999
Q ss_pred ceEEee--cCCceeeccccCCcCeeeecCCC-------------CccccCCeeccCcEEEEEEEecchhHHHhHHHhhhc
Q 002172 169 DARLLE--GDPLKIDQSALTGESLPVTKGPG-------------DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS 233 (956)
Q Consensus 169 D~~ll~--g~~l~VDeS~LTGES~pv~K~~g-------------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~ 233 (956)
||+|++ +..++||||+|||||.||.|.++ |++|+||.+.+|.++++|++||.+|++||+++++++
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 999964 45689999999999999999987 689999999999999999999999999999999987
Q ss_pred c-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-c----cccCcc----chHHHHHHHHHhhcCCchhHHHHHHHHH
Q 002172 234 T-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYP-I----QHRKYR----PGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (956)
Q Consensus 234 ~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~-~----~~~~~~----~~~~~~l~llv~~iP~aLp~~~~v~~~~ 303 (956)
+ .+++|+|+.+++++.++..++++.+++.+++.+. . .+.+|. ..+..++++++++|||+||++++++++.
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~ 322 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLAL 322 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 6 6789999999999887654433333322222111 1 011121 2344677889999999999999999999
Q ss_pred HHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee--------------ccCCCC-----------
Q 002172 304 GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI--------------FAKGVD----------- 358 (956)
Q Consensus 304 ~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--------------~~~~~~----------- 358 (956)
|+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++.... ...+++
T Consensus 323 ~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 402 (995)
T 3ar4_A 323 GTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKP 402 (995)
T ss_dssp HHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEE
T ss_pred HHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccccc
Confidence 9999999999999999999999999999999999999999999875421 000000
Q ss_pred --------HHHHHHHHHHhcccc------------ccChHHHHHHHhcCCh-------H-------------HHhhccce
Q 002172 359 --------ADAVVLMAARASRVE------------NQDAIDAAIVGMLADP-------K-------------EARANIQE 398 (956)
Q Consensus 359 --------~~~~l~~aa~~~~~~------------~~~~i~~ai~~~~~~~-------~-------------~~~~~~~~ 398 (956)
...+..+++.|+... .+||.|.|++..+.+. . ..+..++.
T Consensus 403 ~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 482 (995)
T 3ar4_A 403 IRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKK 482 (995)
T ss_dssp CCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEE
T ss_pred ccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCce
Confidence 112344455554321 2589999987554210 0 13456889
Q ss_pred eEeecCCCCCcceEEEEEcCCC-----cEEEEEeCcHHHHHHhhcC----------chHHHHHHHHHHHHH--HHcCCeE
Q 002172 399 VHFLPFNPTDKRTALTYIDSEG-----KMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKF--AERGLRS 461 (956)
Q Consensus 399 l~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~--a~~G~Rv 461 (956)
++.+||+|++|||+++++..+| +...++|||||.|+++|+. +++.++++.+.+++| +++|+||
T Consensus 483 ~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRv 562 (995)
T 3ar4_A 483 EFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRC 562 (995)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEE
T ss_pred EEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceE
Confidence 9999999999999999987666 5788999999999999964 235567788899999 9999999
Q ss_pred EEEEEeecCCCC----------ccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 002172 462 LAVAYQEVPDGR----------KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (956)
Q Consensus 462 lavA~~~l~~~~----------~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 531 (956)
|++||++++..+ .+..|++++|+|+++++||||||++++|+.|+++||+++|+|||+..||.++|+++||
T Consensus 563 La~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 563 LALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp EEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred EEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCc
Confidence 999999886432 1234789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe
Q 002172 532 GTNMY--PSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 532 ~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
..... ...++.|.+.+. +.+.++.+++++..+|||++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||
T Consensus 643 ~~~~~~i~~~~~~g~~~~~-l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam 721 (995)
T 3ar4_A 643 FGENEEVADRAYTGREFDD-LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721 (995)
T ss_dssp SCTTCCCTTTEEEHHHHHT-SCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred CCCCCcccceEEEchhhhh-CCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe
Confidence 65321 134556655543 455667888889999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCChHHHHHHHHhhc
Q 002172 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILND 688 (956)
Q Consensus 610 g~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~-~~~~~~~p~~~l~i~~~~d 688 (956)
|+|+|+|+++||+|+++++|+.|+.++++||++|+||+|++.|.+++|+..++.++++.+ .++.+++|+|++|+|+++|
T Consensus 722 g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d 801 (995)
T 3ar4_A 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 801 (995)
T ss_dssp TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTT
T ss_pred CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988776665443 4557899999999999999
Q ss_pred cc-ccccccCCCC------CCCCC-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCcCCc------ccCcc----
Q 002172 689 GT-IMTISKDRVK------PSPLP-DSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQ--TDFFPR------TFGVS---- 748 (956)
Q Consensus 689 ~~-~~~l~~d~~~------p~~~p-~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~--~~~~~~------~~~~~---- 748 (956)
++ ++++++++.. ||+.+ ++...+..+..+++.|+++++++++.|++.+. .+.... .++..
T Consensus 802 ~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (995)
T 3ar4_A 802 GLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDH 881 (995)
T ss_dssp HHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCC
T ss_pred HHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccc
Confidence 75 6888887653 23222 23333456777788899998888765543221 100000 00000
Q ss_pred -cCCCCchhhH-HHHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---ChhHHHHHHHHHHHHHHHHHHHhcc--cccccc
Q 002172 749 -SLHEKDIDDW-KKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAVYAN--WSFAAI 820 (956)
Q Consensus 749 -~~~~~~~~~~-~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~ 820 (956)
.+.+.....+ ....++++|...+++|. ..|++|+.+.+++. .+|.++++++++..++.. +..|.+ -.++.+
T Consensus 882 ~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~-~~~~~p~~~~~f~~ 960 (995)
T 3ar4_A 882 PHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHF-LILYVDPLPMIFKL 960 (995)
T ss_dssp SCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHH-HHHHSTHHHHHTTC
T ss_pred ccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHH-HHHHHHHHHHhhcc
Confidence 0000000000 01234555555566665 56888886544332 235566665554443332 233333 123456
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002172 821 EGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALS 854 (956)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~ 854 (956)
.+.+|..|+++++++++++++++++|++.|+++.
T Consensus 961 ~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~ 994 (995)
T 3ar4_A 961 KALDLTQWLMVLKISLPVIGLDEILKFIARNYLE 994 (995)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 7778888888889999999999999999887654
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-85 Score=801.91 Aligned_cols=527 Identities=23% Similarity=0.348 Sum_probs=450.6
Q ss_pred CChhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE-CCeEEEEeccCcCCCcEEEEeCCCeeecceEE
Q 002172 95 PDWQDFV-GIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARL 172 (956)
Q Consensus 95 ~~~~~~~-~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~R-dG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~l 172 (956)
..|++.+ .|+++++++..++.+.++++.+++++|+++.+++++|+| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 3466654 566788888888988888889999999999999999988 99999999999999999999999999999999
Q ss_pred eecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHH
Q 002172 173 LEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFC 251 (956)
Q Consensus 173 l~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~ 251 (956)
++|++ .||||+|||||.||.|++||.+|+||.+.+|.++++|++||.+|.+|||.++++++ .+++|+|+.+++++.++
T Consensus 265 l~G~~-~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEGRS-FVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSSCE-EEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EECce-EeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 99997 79999999999999999999999999999999999999999999999999999887 67899999999998876
Q ss_pred HHHHHHHHHHHHHhHhhccc-cCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEE
Q 002172 252 ICSIAVGMIVEIIVMYPIQH-RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVL 330 (956)
Q Consensus 252 ~~~i~i~~~~~~~~~~~~~~-~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i 330 (956)
+..+++..++.+++++.... ..|..++..++++++.+|||+|++++++++..+..+++++|+++|+++++|+||++|+|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEE
Confidence 65544444333333332222 23778899999999999999999999999999999999999999999999999999999
Q ss_pred eeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcc
Q 002172 331 CSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKR 410 (956)
Q Consensus 331 ~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr 410 (956)
|||||||||+|+|+|.++. ..+.+.++++.+++..+. .++||++.|++.++.+ .++......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~-~s~hPla~Aiv~~a~~-----~~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEH-QSEHPLANAIVHAAKE-----KGLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHH-SSCCHHHHHHHHHHHT-----TCCCCCCCSCCCCCTTT
T ss_pred EEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhh-cCCChHHHHHHHHHHh-----cCCCccCcccccccCCc
Confidence 9999999999999999865 236677888887766544 3458999999987643 22333345678887776
Q ss_pred eEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccC
Q 002172 411 TALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLF 490 (956)
Q Consensus 411 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~ 490 (956)
.... ..+|+. +.+|+++.+.+..... ..+.+..++++++|+|++++|++. +++|+++++
T Consensus 494 gv~~--~~~g~~--~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGHH--VAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSSC--EEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred eEEE--EECCEE--EEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEee
Confidence 5332 235553 4579999887654433 234566788999999999999854 899999999
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
|++|++++++|++|+++|++++|+|||+..+|..+|+++||. ++|++++|
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P 602 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMP 602 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCH
Confidence 999999999999999999999999999999999999999984 37999999
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i 650 (956)
+||.++|+.||++|+.|+|+|||+||+|||++||||||||+|+|+++++||+|++++++..|+.++++||++++||++++
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-hhhcCCChHHHHHH
Q 002172 651 IYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLII 683 (956)
Q Consensus 651 ~~~~~~ni~~vl~~~~~~~-~~~~~~~p~~~l~i 683 (956)
.|++.+|+..+....+.++ ++++.++|+.-.+.
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~ 716 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAA 716 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHH
Confidence 9999999876554332222 23555678754433
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-83 Score=786.25 Aligned_cols=528 Identities=25% Similarity=0.370 Sum_probs=440.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecC
Q 002172 97 WQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD 176 (956)
Q Consensus 97 ~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~ 176 (956)
|..++.++++++++..++.+.++|+++++++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|+
T Consensus 174 ~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~ 253 (723)
T 3j09_A 174 YETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE 253 (723)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECC
Confidence 33455566667777777777777777889999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHH
Q 002172 177 PLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSI 255 (956)
Q Consensus 177 ~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i 255 (956)
+ .||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++++|+.++++..+++..+
T Consensus 254 ~-~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~v 332 (723)
T 3j09_A 254 S-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTV 332 (723)
T ss_dssp E-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHH
T ss_pred e-EEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Confidence 7 79999999999999999999999999999999999999999999999999999887 678999999999988766554
Q ss_pred HHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccc
Q 002172 256 AVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335 (956)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKT 335 (956)
++..++.+++++...+.++...+..++++++.+|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||
T Consensus 333 l~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKT 412 (723)
T 3j09_A 333 LLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKT 412 (723)
T ss_dssp HHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHH
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCC
Confidence 44444333333333345677889999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEE
Q 002172 336 GTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTY 415 (956)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 415 (956)
||||+|+|+|.++. .. +.+.++++.+++.++.. ++||++.|++..+.+. ++......+|++...+. +.
T Consensus 413 GTLT~g~~~v~~~~--~~--~~~~~~~l~~aa~~e~~-s~hP~~~Ai~~~a~~~-----~~~~~~~~~~~~~~g~g-~~- 480 (723)
T 3j09_A 413 GTLTKGKPEVTDLV--PL--NGDERELLRLAAIAERR-SEHPIAEAIVKKALEH-----GIELGEPEKVEVIAGEG-VV- 480 (723)
T ss_dssp HHTSCSCCEEEEEE--ES--SSCHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTE-EE-
T ss_pred CccccCceEEEEEE--eC--CCCHHHHHHHHHHHhcc-CCCchhHHHHHHHHhc-----CCCcCCccceEEecCCc-eE-
Confidence 99999999999865 22 45777888887766543 4589999998875321 11111111122111111 10
Q ss_pred EcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCc
Q 002172 416 IDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495 (956)
Q Consensus 416 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~ 495 (956)
+ ..+.+|+++.+.+.... .++.+.+..++++.+|+|++++|++ ++++|+++++|++||
T Consensus 481 ----~--~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~va~~-------------~~~~G~i~i~D~~~~ 538 (723)
T 3j09_A 481 ----A--DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVIVARN-------------GRVEGIIAVSDTLKE 538 (723)
T ss_dssp ----E--TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHTTTCEEEEEEET-------------TEEEEEEEEECCSCT
T ss_pred ----E--EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhcCCeEEEEEEC-------------CEEEEEEeecCCcch
Confidence 0 23567998877654322 2345667788999999999999985 399999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHH
Q 002172 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYE 575 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~ 575 (956)
+++++|++|+++||+++|+|||+..+|.++|+++|+. .+|++++|+||.+
T Consensus 539 ~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~~ 588 (723)
T 3j09_A 539 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKSE 588 (723)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHHH
T ss_pred hHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHHH
Confidence 9999999999999999999999999999999999984 4799999999999
Q ss_pred HHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (956)
Q Consensus 576 iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~ 655 (956)
+|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+|++++++..++.++++||++|+|+++++.|+++
T Consensus 589 ~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~ 667 (723)
T 3j09_A 589 EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 667 (723)
T ss_dssp HHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhhhcCCChHHHHHHHHhhccc
Q 002172 656 ITIRIVLGFMLL-ALIWKFDFPPFMVLIIAILNDGT 690 (956)
Q Consensus 656 ~ni~~vl~~~~~-~~~~~~~~~p~~~l~i~~~~d~~ 690 (956)
+|+..+...+.. ..++++.++|+.-.+...+.+..
T Consensus 668 ~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~ 703 (723)
T 3j09_A 668 YNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVS 703 (723)
T ss_dssp HHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHhhhhccccccCHHHHHHHHhccHHH
Confidence 998754433222 22345578887655544444443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-83 Score=778.10 Aligned_cols=528 Identities=25% Similarity=0.371 Sum_probs=438.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecC
Q 002172 97 WQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD 176 (956)
Q Consensus 97 ~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~ 176 (956)
|...+.++++++++..++.+.++|+++++++|+++.+++++|+|||++++|+++||+|||+|.+++||+|||||+|++|+
T Consensus 96 ~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~ 175 (645)
T 3j08_A 96 YETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE 175 (645)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECc
Confidence 33455566667777777777777777888999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHH
Q 002172 177 PLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSI 255 (956)
Q Consensus 177 ~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i 255 (956)
+ .||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++++|+.++++..+++..+
T Consensus 176 ~-~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~v 254 (645)
T 3j08_A 176 S-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTV 254 (645)
T ss_dssp E-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHH
T ss_pred E-EEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Confidence 7 79999999999999999999999999999999999999999999999999999887 678999999999988766544
Q ss_pred HHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccc
Q 002172 256 AVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335 (956)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKT 335 (956)
++..++.+++++...+.++...+..++++++.+|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||
T Consensus 255 l~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKT 334 (645)
T 3j08_A 255 LLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKT 334 (645)
T ss_dssp HHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGG
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCc
Confidence 44433333333333345677788889999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEE
Q 002172 336 GTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTY 415 (956)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 415 (956)
||||+|+|+|.++.. . +.+.++++.+++.++. .+.||++.|++..+.+. +++.....+|++...+.. ..
T Consensus 335 GTLT~~~~~v~~~~~--~--~~~~~~~l~~aa~~e~-~s~hPla~Aiv~~a~~~-----g~~~~~~~~~~~~~g~g~-~~ 403 (645)
T 3j08_A 335 GTLTKGKPEVTDLVP--L--NGDERELLRLAAIAER-RSEHPIAEAIVKKALEH-----GIELGEPEKVEVIAGEGV-VA 403 (645)
T ss_dssp GTSSSSCCEEEEEEE--S--SSCHHHHHHHHHHHHT-TCCSHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTEE-EE
T ss_pred ccccCCCeEEEEEEe--C--CCCHHHHHHHHHHHhh-cCCChhHHHHHHHHHhc-----CCCcCCccceEEecCCce-EE
Confidence 999999999998652 2 4677888888777654 34589999998875321 111111112221111110 00
Q ss_pred EcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCc
Q 002172 416 IDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495 (956)
Q Consensus 416 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~ 495 (956)
..+.+|+++.+.+.... .++.+.+..++++++|+|+++++++. +++|+++++|++||
T Consensus 404 -------~~v~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~~ 460 (645)
T 3j08_A 404 -------DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKE 460 (645)
T ss_dssp -------TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCTT
T ss_pred -------EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCchh
Confidence 23567998877653322 23456677888999999999999853 99999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHH
Q 002172 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYE 575 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~ 575 (956)
+++++|++|+++|++++|+|||+..+|.++|+++|+. .+|++++|+||.+
T Consensus 461 ~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~~ 510 (645)
T 3j08_A 461 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKSE 510 (645)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHHH
Confidence 9999999999999999999999999999999999984 4699999999999
Q ss_pred HHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (956)
Q Consensus 576 iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~ 655 (956)
+|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+|++++++..++.++++||++|+|+++++.|+++
T Consensus 511 ~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~ 589 (645)
T 3j08_A 511 EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 589 (645)
T ss_dssp HHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhhhcCCChHHHHHHHHhhccc
Q 002172 656 ITIRIVLGFMLL-ALIWKFDFPPFMVLIIAILNDGT 690 (956)
Q Consensus 656 ~ni~~vl~~~~~-~~~~~~~~~p~~~l~i~~~~d~~ 690 (956)
+|+..+...+.. ..++++.++|+.-.+...+.+..
T Consensus 590 ~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~ 625 (645)
T 3j08_A 590 YNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVS 625 (645)
T ss_dssp HHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHhHhhhcccccCHHHHHHHHhcchHH
Confidence 998754433221 22345578887655444444433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-34 Score=308.38 Aligned_cols=259 Identities=23% Similarity=0.364 Sum_probs=198.8
Q ss_pred HHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHH
Q 002172 304 GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIV 383 (956)
Q Consensus 304 ~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~ 383 (956)
++.+++++|+++|+.+++|.|+++++||||||||||+|+|.|.+.. +.++++.+++.... .+.||+..++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~-~s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEA-LSSHPIAKAIV 75 (263)
Confidence 4578999999999999999999999999999999999999997642 34455555554433 34578998887
Q ss_pred HhcCChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEE
Q 002172 384 GMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLA 463 (956)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~Rvla 463 (956)
..+.+.. ++......|.. . .| +|....+-...-. +. -..+|.+ +.
T Consensus 76 ~~~~~~g-----~~~~~~~~~~~------~-----~G------~g~~~~~~~~~~~---~G---------~~~~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQG-----VKILEVKDFKE------I-----SG------IGVRGKISDKIIE---VK---------KAENNND-IA 120 (263)
Confidence 7653321 11000000100 0 01 1111111000000 00 0002344 44
Q ss_pred EEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccC
Q 002172 464 VAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 543 (956)
Q Consensus 464 vA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g 543 (956)
++++. .+.|.+.+.|+++|+++++++.|++.|+++.|+|||+..++..+++++|+.
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------- 176 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ----------- 176 (263)
Confidence 55543 789999999999999999999999999999999999999999999999984
Q ss_pred CccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhcccee
Q 002172 544 QNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (956)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADiv 623 (956)
++|+.+.|++|..+++.++..++.|+|+|||.||++|+++|++|++++.+++.+++.||++
T Consensus 177 -------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 177 -------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Confidence 2477778999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHH
Q 002172 624 LTEPGLSVIISAVLTSRAIFQRMKNY 649 (956)
Q Consensus 624 L~~~~~~~iv~ai~~gR~~~~~i~~~ 649 (956)
++++++..++.++..+|+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 99999999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=261.90 Aligned_cols=276 Identities=29% Similarity=0.423 Sum_probs=207.5
Q ss_pred HHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHH
Q 002172 304 GSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIV 383 (956)
Q Consensus 304 ~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~ 383 (956)
|+++++++|+++|+++++|++++++++|||||||||.+.+.+.++. ... + +.++++.+++..+. .+.||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~--~~~-~-~~~~~l~~~~~~e~-~s~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV--PLN-G-DERELLRLAAIAER-RSEHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEE--ESS-S-CHHHHHHHHHHHTT-TCCSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEE--eCC-C-CHHHHHHHHHHHhh-cCCCHHHHHHH
Confidence 6789999999999999999999999999999999999999987654 232 4 67778877766644 45689999987
Q ss_pred HhcCChHHHhhccceeEeecCCCCCcceEEEEEcCCCcE---EEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCe
Q 002172 384 GMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKM---HRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLR 460 (956)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~---~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~R 460 (956)
..+... ++... +....... .|.. ..+.+|.++.+.+..... ++.+.+..+.+..+|.+
T Consensus 84 ~~~~~~-----g~~~~------~~~~~~~~-----~G~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~ 144 (287)
T 3a1c_A 84 KKALEH-----GIELG------EPEKVEVI-----AGEGVVADGILVGNKRLMEDFGVAV---SNEVELALEKLEREAKT 144 (287)
T ss_dssp HHHHHT-----TCCCC------CCSCEEEE-----TTTEEEETTEEEECHHHHHHTTCCC---CHHHHHHHHHHHHTTCE
T ss_pred HHHHhc-----CCCcc------ccccceee-----cCCCeEEEEEEECCHHHHHhcCCCc---cHHHHHHHHHHHhCCCe
Confidence 765321 11100 00000000 0111 124467766544322211 12344556778889999
Q ss_pred EEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc
Q 002172 461 SLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540 (956)
Q Consensus 461 vlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~ 540 (956)
++++++.. .+.|.+...++++|++.++++.|++.|+++.++||++...+..+.+.+|+.
T Consensus 145 ~i~~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~-------- 203 (287)
T 3a1c_A 145 AVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------- 203 (287)
T ss_dssp EEEEEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--------
T ss_pred EEEEEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc--------
Confidence 99999864 889999999999999999999999999999999999999999999999984
Q ss_pred ccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhcc
Q 002172 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620 (956)
Q Consensus 541 l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aA 620 (956)
..|..+.|+.|...++.++.. ..|+|+||+.||.+|++.|++|++++++.+..++.|
T Consensus 204 ----------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~a 260 (287)
T 3a1c_A 204 ----------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESG 260 (287)
T ss_dssp ----------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCS
T ss_pred ----------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhC
Confidence 246667799999999999988 889999999999999999999999997777778889
Q ss_pred ceeecCCChhHHHHHHHHHHHHHHHHH
Q 002172 621 DIVLTEPGLSVIISAVLTSRAIFQRMK 647 (956)
Q Consensus 621 DivL~~~~~~~iv~ai~~gR~~~~~i~ 647 (956)
|+++.++++..+..++..+|+++++||
T Consensus 261 d~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 261 DIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp SEEESSSCTHHHHHHHHTTC-------
T ss_pred CEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=226.22 Aligned_cols=110 Identities=30% Similarity=0.515 Sum_probs=105.6
Q ss_pred HHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCccccC
Q 002172 124 AAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSG 203 (956)
Q Consensus 124 ~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~G 203 (956)
++++|+++.+++++|+|||++++|++++|+|||+|.+++||+|||||+|++|++ .||||+|||||.|+.|.+||.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCCCEEEeC
Confidence 567888899999999999999999999999999999999999999999999985 8999999999999999999999999
Q ss_pred CeeccCcEEEEEEEecchhHHHhHHHhhhcc
Q 002172 204 STCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (956)
Q Consensus 204 s~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 234 (956)
|.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999998754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-27 Score=227.20 Aligned_cols=116 Identities=29% Similarity=0.480 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEECCe------EEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCee
Q 002172 118 ENNAGNAAAALMASLAPKSKVLRDGK------WMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLP 191 (956)
Q Consensus 118 e~~a~~~~~~l~~~~~~~~~V~RdG~------~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~p 191 (956)
++|+.+++++|+++.+++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 56888899999999999999999764 7899999999999999999999999999999998 7999999999999
Q ss_pred eecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc
Q 002172 192 VTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 234 (956)
Q Consensus 192 v~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 234 (956)
+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998754
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=241.47 Aligned_cols=276 Identities=29% Similarity=0.400 Sum_probs=200.7
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhh
Q 002172 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~ 394 (956)
+|+++++|.+++++.||||||||||.|+++|.++. ... + +.+.++.+++..... ..+++..++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~--~~~-~-~~~~~~~~~~~~~~~-s~~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIV--GFN-H-SEDELLQIAASLEAR-SEHPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEE--ESS-S-CHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEE--ecC-C-CHHHHHHHHHHhhcc-CCCHHHHHHHHHHHhcCCCCC
Confidence 58899999999999999999999999999998754 333 3 677777776665443 345777776665422110001
Q ss_pred ccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc
Q 002172 395 NIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK 474 (956)
Q Consensus 395 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~ 474 (956)
....+...+-. ..... .++.. +..|.++.+.+...... ...+.+..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g~----~~~~~---~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPGK----GVEGI---VNGRR--YMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETTT----EEEEE---ETTEE--EEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCCC----EEEEE---ECCEE--EEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 11112222111 11111 13332 34577777665443221 23456778899998888754
Q ss_pred cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCccc
Q 002172 475 ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALP 554 (956)
Q Consensus 475 ~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~ 554 (956)
.++|.+.+.|+++|++.++++.|++.|+++.++||++...+..+.+.+|+.
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------- 184 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD---------------------- 184 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh----------------------
Confidence 789999999999999999999999999999999999999999999999984
Q ss_pred HHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHH
Q 002172 555 VDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 555 ~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ 634 (956)
+.|..+.|.+|...++.+.+.. .|+|+||+.||++|++.|++|++|+++++..+++||+++..+++..+..
T Consensus 185 --------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 185 --------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp --------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred --------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 2477788999999999999876 4689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002172 635 AVLTSRAIFQRMKNYTIYAVS 655 (956)
Q Consensus 635 ai~~gR~~~~~i~~~i~~~~~ 655 (956)
+++.+|++++++++++.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-23 Score=229.46 Aligned_cols=145 Identities=12% Similarity=0.010 Sum_probs=116.1
Q ss_pred cCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHH--hhhcceEE
Q 002172 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDEL--IEKADGFA 566 (956)
Q Consensus 489 ~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~--~~~~~vfa 566 (956)
..+++||+++++++.|+++|++++|+|||+..++.++++++|+..... .+. ..... .++..+... -+..++|+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~--~i~-~n~l~--~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV--KVV-SNFMD--FDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE--EEE-EECEE--ECTTSBEEEECSSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc--eEE-eeeEE--EcccceeEeccccccchhh
Confidence 358999999999999999999999999999999999999999864311 011 00000 000000000 01235688
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhh---ccCCeeEEec-------cccHHHhhccceeecCCChhHHHHHH
Q 002172 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL---KKADIGIAVA-------DATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapAL---k~AdVGIamg-------~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+..|.+|...+..+++.|+.|+|+|||+||+||+ ++|||||||| +++|++++++||||++|++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 8999999999999999999999999999999994 5999999999 79999999999999999999999998
Q ss_pred HH
Q 002172 637 LT 638 (956)
Q Consensus 637 ~~ 638 (956)
.+
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=174.68 Aligned_cols=139 Identities=20% Similarity=0.344 Sum_probs=117.4
Q ss_pred CCCCHHHHHHHHHHhcc--ccccChHHHHHHHhcCCh--HHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcH
Q 002172 355 KGVDADAVVLMAARASR--VENQDAIDAAIVGMLADP--KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAP 430 (956)
Q Consensus 355 ~~~~~~~~l~~aa~~~~--~~~~~~i~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 430 (956)
.|.+.+.++.+|++++. ....||+|.|++.++... ...+..++.++++||||.+|||++++++.+|+.+.++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 47788999999999984 456799999999886532 23467799999999999999999999877788889999999
Q ss_pred HHHHHhhcC----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC---ccCCCCCceEEEEeccCCCC
Q 002172 431 EQILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR---KESSGGPWQFIGLMPLFDPP 493 (956)
Q Consensus 431 e~il~~~~~----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~---~~~~e~~l~~lGli~~~D~l 493 (956)
|.|+++|+. +++.++.+.+.+++|+++|+|||++||+.++..+ ....|++|+|+|+++|-|.-
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC--
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcccccc
Confidence 999999984 4567788999999999999999999999987643 23569999999999998853
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3.1e-13 Score=138.44 Aligned_cols=126 Identities=21% Similarity=0.365 Sum_probs=106.0
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHH
Q 002172 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 579 (956)
+++.|++.|+++.++||++...+..+++++|+.. +|..+ .+|.+.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 8999999999999999999999999999999842 12222 566666666
Q ss_pred HhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHHHHHHHHHHHHHHHHH
Q 002172 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTI 651 (956)
Q Consensus 580 lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai~~gR~~~~~i~~~i~ 651 (956)
+.++ ...|+|+||+.||.+|++.|++|++++++++.+++.||+++.+++ +..+.+.+..+|..++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6544 467999999999999999999999999999999999999998764 67788889999999999999998
Q ss_pred HHHHHH
Q 002172 652 YAVSIT 657 (956)
Q Consensus 652 ~~~~~n 657 (956)
|.+.+|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 887665
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.7e-12 Score=141.46 Aligned_cols=156 Identities=14% Similarity=0.130 Sum_probs=111.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.++.|++.|+++.|+||+....+..+.+++|+..- . ...+.- .+...... +.....++.-.|+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~-~-~~~l~~--~d~~~tg~-----~~~~~~~~kpk~~ 248 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYA-Q-SNTLEI--VSGKLTGQ-----VLGEVVSAQTKAD 248 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEE-E-EEEEEE--ETTEEEEE-----EESCCCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeE-E-eeeeEe--eCCeeeee-----ecccccChhhhHH
Confidence 7899999999999999999999999999999999999998421 0 000000 00000000 0000011223455
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~ 651 (956)
...++.+.++-....|.|+|||.||.+|++.|++|++| ++.+..++.||.++..+++..++.++.......++++.|+.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 55566666665567899999999999999999999999 88999999999999999999999999888877788888888
Q ss_pred HHHHHH
Q 002172 652 YAVSIT 657 (956)
Q Consensus 652 ~~~~~n 657 (956)
+.+.+|
T Consensus 328 ~~~~~~ 333 (335)
T 3n28_A 328 EGHHHH 333 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 877655
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.4e-12 Score=99.80 Aligned_cols=51 Identities=82% Similarity=1.136 Sum_probs=49.2
Q ss_pred chhhhhHHhHHHHhhhhHHhhhhhhcccchhhhhhhhcCCChhhhcccccC
Q 002172 906 KFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956 (956)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (956)
+|.++++++|++++|++++||||+|+++||+||+++++|+|++++++||||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 578899999999999999999999999999999999999999999999997
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=8.1e-11 Score=119.25 Aligned_cols=131 Identities=21% Similarity=0.223 Sum_probs=103.4
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhH
Q 002172 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK 573 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K 573 (956)
.+++.++|+.|++.|+++.++||++...+..+.+++|+.. .|... ..|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~~--k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLGK--LEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEESC--SCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecCC--CCc
Confidence 4567899999999999999999999999999999999852 12211 345
Q ss_pred HHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHH----HHHHHHHHHHHH
Q 002172 574 YEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII----SAVLTSRAIFQR 645 (956)
Q Consensus 574 ~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv----~ai~~gR~~~~~ 645 (956)
...++.+.++ | +.|+|+||+.||.+|++.|+++++++++.+..++.||+++.+++...++ +.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 5555544332 3 5799999999999999999999999999999999999999887655544 444556777888
Q ss_pred HHHHHHHHHHH
Q 002172 646 MKNYTIYAVSI 656 (956)
Q Consensus 646 i~~~i~~~~~~ 656 (956)
++.++.|+.+.
T Consensus 165 ~~~~~~~~~~~ 175 (180)
T 1k1e_A 165 FDTAQGFLKSV 175 (180)
T ss_dssp HHCHHHHHHHG
T ss_pred hhhccchhhhh
Confidence 88777777654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=5.5e-11 Score=121.88 Aligned_cols=124 Identities=18% Similarity=0.252 Sum_probs=102.6
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee--ChhhHHHHH
Q 002172 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV--FPEHKYEIV 577 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~--~Pe~K~~iV 577 (956)
+|+.|++.|+++.++||+....+..+.+++|+.. +|..+ .|+-...+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 4999999999999999999999999999999852 12222 356666777
Q ss_pred HHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHHHHHHHHHHHHHHHHHHH
Q 002172 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTIYA 653 (956)
Q Consensus 578 ~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai~~gR~~~~~i~~~i~~~ 653 (956)
+.++-....|+|+||+.||.+|++.|+++++++++.+..++.||+++.+++ +..+.+.+...|..|+++.++..|.
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 777666677999999999999999999999999999999999999998877 5556667777888888877776653
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=99.14 E-value=8.4e-12 Score=83.76 Aligned_cols=30 Identities=80% Similarity=1.194 Sum_probs=29.3
Q ss_pred hhhhcccchhhhhhhhcCCChhhhcccccC
Q 002172 927 RELNTLKGHVESVVRLKGLDIDTIQQSYTV 956 (956)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (956)
||+||||||+||++|+||+|+|+|||||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 799999999999999999999999999998
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-11 Score=124.21 Aligned_cols=114 Identities=20% Similarity=0.332 Sum_probs=88.1
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHH
Q 002172 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (956)
Q Consensus 499 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~ 578 (956)
.+|+.|++.|+++.++||++...+..+++++|+.. +|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 35999999999999999999999999999999852 12222 34555554
Q ss_pred HHhh----CCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhH----HHHHHHHHHHHHH
Q 002172 579 RLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVLTSRAIFQ 644 (956)
Q Consensus 579 ~lq~----~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~----iv~ai~~gR~~~~ 644 (956)
.+.+ ....|+|+||+.||.+|++.|+++++|+++.+.+++.||+|+.+++-.. +.+.+...|..++
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~ 180 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELD 180 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSC
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHH
Confidence 4433 3456999999999999999999999999999999999999998776443 4444444444333
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-10 Score=119.59 Aligned_cols=97 Identities=24% Similarity=0.347 Sum_probs=83.5
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHH
Q 002172 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 579 (956)
+++.|++.|+++.++||++...+..+++++|+.. +|..+ ..|.+.++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 8999999999999999999999999999999842 23333 456777766
Q ss_pred HhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC
Q 002172 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (956)
Q Consensus 580 lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~ 628 (956)
+.++ ...|+|+||+.||.+|+++|+++++++++.+.+++.||+|+.+++
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCC
Confidence 6554 567999999999999999999999999999999999999998775
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-10 Score=115.24 Aligned_cols=135 Identities=19% Similarity=0.151 Sum_probs=96.2
Q ss_pred HcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHH--HhCCCC
Q 002172 456 ERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR--RLGMGT 533 (956)
Q Consensus 456 ~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~--~lGi~~ 533 (956)
.++.+.+++-....-.+..-....+-+.++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 6 ~~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~- 76 (168)
T 3ewi_A 6 LKEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK- 76 (168)
T ss_dssp -CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-
T ss_pred HhcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-
Confidence 3466777665544211111111222256777777776 3899999999999999999 56777888 45542
Q ss_pred CCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEe
Q 002172 534 NMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 534 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
. |. .+++|...++.+.++ ...|+|+||+.||.||++.|+++++|
T Consensus 77 ------~------------------------~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~ 124 (168)
T 3ewi_A 77 ------T------------------------EV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP 124 (168)
T ss_dssp ------E------------------------EC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC
T ss_pred ------E------------------------EE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe
Confidence 0 11 124677777766554 34689999999999999999999999
Q ss_pred ccccHHHhhccceeecCCChhH
Q 002172 610 ADATDAARSASDIVLTEPGLSV 631 (956)
Q Consensus 610 g~gtd~Ak~aADivL~~~~~~~ 631 (956)
+++.+.+++.||+|+.+++=..
T Consensus 125 ~na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 125 ADACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp TTCCHHHHTTCSEECSSCTTTT
T ss_pred CChhHHHHHhCCEEeCCCCCcc
Confidence 9999999999999998765444
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.04 E-value=4.9e-10 Score=113.10 Aligned_cols=104 Identities=24% Similarity=0.328 Sum_probs=86.6
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHH
Q 002172 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 579 (956)
+++.|++.|+++.++||+....+..+++++|+. . |+.. ..|.+.++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------~------------------------~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------V------------------------LHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------E------------------------EESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------e------------------------EeCC--CChHHHHHH
Confidence 899999999999999999999999999999984 1 2222 456666655
Q ss_pred HhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002172 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 580 lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+.++ ...|.|+||+.||.+|++.|++|++++++.+..++.||+++.+++...++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 5443 35689999999999999999999999999999999999999988866655544
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.03 E-value=8.2e-10 Score=116.27 Aligned_cols=148 Identities=20% Similarity=0.124 Sum_probs=105.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCc-cc--cCCcc-c-ccc------------
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSS-AL--LGQNK-D-ESI------------ 550 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~-~l--~g~~~-~-~~~------------ 550 (956)
...+.+++.++|++|++.|++++++||+....+..+++++|+..... +.. +. .|+.. . ..+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999853110 000 11 11111 0 000
Q ss_pred -----------------------CcccHHHHhhh--cce-----EEeeCh--hhHHHHHHHHhhC-C---CEEEEEcCCc
Q 002172 551 -----------------------VALPVDELIEK--ADG-----FAGVFP--EHKYEIVKRLQAR-K---HICGMTGDGV 594 (956)
Q Consensus 551 -----------------------~~~~~~~~~~~--~~v-----far~~P--e~K~~iV~~lq~~-g---~~V~m~GDGv 594 (956)
+...++++.+. ..+ +-.+.| .+|...++.+.+. | ..|.++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 00011111111 111 234446 6899888887654 2 4689999999
Q ss_pred cChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 595 NDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
||.+|++.|++|++|+++.+..++.||+++.+++-..+.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999998888888888774
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.6e-09 Score=107.57 Aligned_cols=102 Identities=28% Similarity=0.320 Sum_probs=81.8
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC--hhhHHHHH
Q 002172 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF--PEHKYEIV 577 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~--Pe~K~~iV 577 (956)
+++.|++.|+++.++||++...+..+.+++|+... |.... |+--..+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~kpk~~~~~~~~ 88 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGVVDKLSAAEELC 88 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSCSCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------ecccCChHHHHHHHH
Confidence 89999999999999999999999999999998521 11122 22223344
Q ss_pred HHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhH
Q 002172 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (956)
Q Consensus 578 ~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~ 631 (956)
+.+.-....|.|+||+.||.+|++.|+++++++++.+..++.||+++.+++...
T Consensus 89 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 89 NELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTT
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCc
Confidence 444333457999999999999999999999999999999999999999988444
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.3e-09 Score=104.36 Aligned_cols=140 Identities=19% Similarity=0.293 Sum_probs=92.8
Q ss_pred cccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCCh-HHHhhccc--eeEeecCCCCCcc
Q 002172 334 KTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADP-KEARANIQ--EVHFLPFNPTDKR 410 (956)
Q Consensus 334 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~-~~~~~~~~--~l~~~pF~s~~kr 410 (956)
..||+|.|++.+..+. +. .+.++++++.+|+.++. .+++|++.||+.++.+. ........ ..++.||++..++
T Consensus 13 ~~~tit~gnr~vt~v~--~~-~g~~e~elL~lAAs~E~-~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFI--PA-QGVDEKTLADAAQLASL-ADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEE--EC-TTSCHHHHHHHHHHTTS-SCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEE--ec-CCCCHHHHHHHHHHHhC-cCCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 4799999999998854 22 47788999998888774 45689999999876421 10000000 2345789988886
Q ss_pred eEEEEEcCCCcEEEEEeCcHHHHHHhhcCch-HHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEecc
Q 002172 411 TALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPL 489 (956)
Q Consensus 411 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~ 489 (956)
..+.+ +|+ .+.+|+++.|.+++.... ..+..+.+.+++++++|.++++||... +++|++++
T Consensus 89 ~Gv~v---~G~--~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TTE--EEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CCE--EEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 564 567899887766654210 122346777889999999999999753 89999999
Q ss_pred CCCCCc
Q 002172 490 FDPPRH 495 (956)
Q Consensus 490 ~D~lR~ 495 (956)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.85 E-value=3e-10 Score=126.66 Aligned_cols=166 Identities=13% Similarity=0.127 Sum_probs=110.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCcc--------------ccccCc---cc
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNK--------------DESIVA---LP 554 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~--------------~~~~~~---~~ 554 (956)
++++++.++++.|++ |+.+.++|||+...+..+.+.+|+.... ....+..... +..+.. .+
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL-HGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE-EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh-cccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 578999999999999 9999999999977777777777773211 0000000000 000000 01
Q ss_pred HHHHhhh----c--ceEE----eeChhhHHHHHHHHhhCC--CEEEEEcCCccChhhhccC----CeeEEeccccHHHhh
Q 002172 555 VDELIEK----A--DGFA----GVFPEHKYEIVKRLQARK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARS 618 (956)
Q Consensus 555 ~~~~~~~----~--~vfa----r~~Pe~K~~iV~~lq~~g--~~V~m~GDGvNDapALk~A----dVGIamg~gtd~Ak~ 618 (956)
+ +.+.+ . ..+. -..+.+|...++.++... +.|+++|||.||.+|++.| ++|||| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 00000 0 1111 113567988888776543 6699999999999999999 999999 99999999
Q ss_pred ccceeecCCChhHHHHHH----HHHHHHHHHHHH-------HHHHHHHHHHHHHH
Q 002172 619 ASDIVLTEPGLSVIISAV----LTSRAIFQRMKN-------YTIYAVSITIRIVL 662 (956)
Q Consensus 619 aADivL~~~~~~~iv~ai----~~gR~~~~~i~~-------~i~~~~~~ni~~vl 662 (956)
+||+|+.+++...+..++ ..||..+ ++-+ |+.+..+.|+..++
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEVL 312 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHHH
Confidence 999999998887776655 4677777 5555 55555555555443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.80 E-value=7.7e-09 Score=118.88 Aligned_cols=136 Identities=21% Similarity=0.229 Sum_probs=105.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe----
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG---- 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar---- 567 (956)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+.... ...+.- .+ ..+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~--~~~l~~--~d--------------g~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVA--ANELEI--VD--------------GTLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEE--EECEEE--ET--------------TEEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcccee--eeeEEE--eC--------------CEEEeeEccC
Confidence 78999999999999999999999999999999999999995210 000000 00 001111
Q ss_pred -eChhhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHH
Q 002172 568 -VFPEHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (956)
Q Consensus 568 -~~Pe~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~ 642 (956)
..+..|.++++.+.++ | +.|.|+|||.||.+|++.|++|+++ ++.+..++.||+++..+++..++.++..+|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1256777777665543 3 4689999999999999999999999 77888889999999999999999999888776
Q ss_pred HHHH
Q 002172 643 FQRM 646 (956)
Q Consensus 643 ~~~i 646 (956)
+++.
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.2e-08 Score=105.03 Aligned_cols=133 Identities=22% Similarity=0.243 Sum_probs=95.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe-eC
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VF 569 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar-~~ 569 (956)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+...+ .... ..+... ..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~~~~~~~--~~~~----------~~~~~~~~~ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF--SNTLIVEN--DALN----------GLVTGHMMF 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE--EEEEEEET--TEEE----------EEEEESCCS
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc--cceeEEeC--CEEE----------eeeccCCCC
Confidence 468999999999999999999999999999999999999985310 11110000 0000 000000 12
Q ss_pred hhhHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHH
Q 002172 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 570 Pe~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
+..|.++++.+.++ ...|.|+||+.||.+|++.|+++++| ++.+..++.||+++.+++|..+..++.+
T Consensus 140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 34566655554432 35689999999999999999999999 7788889999999999999998887743
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.67 E-value=6.7e-08 Score=104.28 Aligned_cols=71 Identities=23% Similarity=0.300 Sum_probs=58.8
Q ss_pred eeChh--hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 567 GVFPE--HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 567 r~~Pe--~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.+.|. .|...++.+.++ | .-|+++||+.||.+|++.|++|+||++|.+..|++||+|..+++-..+..+|+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 44454 677766665543 2 35899999999999999999999999999999999999998888888888875
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=5e-08 Score=99.33 Aligned_cols=105 Identities=25% Similarity=0.340 Sum_probs=82.3
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHH
Q 002172 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 579 (956)
+++.|++.|+++.++||++...+..+.+++|+... |... ..|...++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~------------------------------~~~~--kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL------------------------------YQGQ--SNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE------------------------------ECSC--SCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee------------------------------ecCC--CCCHHHHHH
Confidence 89999999999999999999999999999998521 1111 223444444
Q ss_pred HhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHH-HHH
Q 002172 580 LQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAV 636 (956)
Q Consensus 580 lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv-~ai 636 (956)
+.++ | +.|+|+||+.||.+|++.|+++++++++.+..++.||+++.+++-..++ +++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l 170 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 170 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHH
Confidence 3322 3 5699999999999999999999999988888888999999887655555 444
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.65 E-value=3.6e-08 Score=109.08 Aligned_cols=131 Identities=18% Similarity=0.176 Sum_probs=94.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE-eeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA-GVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa-r~~P 570 (956)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+.... ...+... +....+ .+.. -..+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f--~~~l~~~--dg~~tg----------~i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAF--SNTVEIR--DNVLTD----------NITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE--EECEEEE--TTEEEE----------EECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEE--EEEEEee--CCeeee----------eEecccCCC
Confidence 48899999999999999999999999999999999999985211 1111000 000000 0000 0134
Q ss_pred hhHHHHHHHHhh----CCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~----~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..|.++++.+.+ ....|.|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++..++.+++
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 556665554433 335699999999999999999999999 577778889999999999998877653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.59 E-value=1.7e-08 Score=102.26 Aligned_cols=116 Identities=23% Similarity=0.344 Sum_probs=89.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceE--EeeC
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF--AGVF 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf--ar~~ 569 (956)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+..- . ....... .++ ....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~-~~~~~~~------------------~~~~~~~~~ 137 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A-NRAIFED------------------GKFQGIRLR 137 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E-EEEEEET------------------TEEEEEECC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e-eeEEeeC------------------CceECCcCC
Confidence 7899999999999999999999999998887777 77776321 0 0000000 001 3456
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
|.+|...++.+ ....|.|+||+.||.+|++.|++|++|+++.+ .||+++ +++..+...+
T Consensus 138 ~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l 196 (201)
T 4ap9_A 138 FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFI 196 (201)
T ss_dssp SSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHH
T ss_pred ccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHH
Confidence 78899999998 45668899999999999999999999997766 789998 4577666655
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.3e-07 Score=93.26 Aligned_cols=111 Identities=20% Similarity=0.247 Sum_probs=87.8
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee--Ch
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV--FP 570 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~--~P 570 (956)
..+++.++++.|++.|+++.++||.....+..+.+++|+... |... .|
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------------------------------~~~~kp~~ 86 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI------------------------------YTGSYKKL 86 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE------------------------------EECC--CH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh------------------------------ccCCCCCH
Confidence 356789999999999999999999999999999999998421 1111 23
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv 633 (956)
+--..+.+.+.-..+.|.|+||+.||.+|.+.|++++++.++.+..++.||+++.+.+-..++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 333344455444445789999999999999999999999888888888999999887766666
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=6.7e-08 Score=98.62 Aligned_cols=128 Identities=23% Similarity=0.337 Sum_probs=88.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe-eCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar-~~P 570 (956)
++.|+++++++.|++.|+++.++||+....+..+.+.+|+... ......... .... ..+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~----------~~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKD---GKLT----------GDVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEET---TEEE----------EEEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEEC---CEEc----------CCcccCccCC
Confidence 5678999999999999999999999998888888888887421 000000000 0000 000000 224
Q ss_pred hhHHHHHHHHhh-CC---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHH
Q 002172 571 EHKYEIVKRLQA-RK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 571 e~K~~iV~~lq~-~g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ 634 (956)
..|.+.++.+.+ .| ..|.|+||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 567666555443 33 35999999999999999999999998 56667888999998767776643
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=2.2e-07 Score=100.71 Aligned_cols=67 Identities=15% Similarity=0.150 Sum_probs=57.1
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..|..-++.+.+. | .-|+++||+.||.+|++.|++|+||+++.+..|+.||+|..+++-..+.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 4577777666543 2 35899999999999999999999999999999999999998888888888875
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.52 E-value=1.4e-07 Score=101.86 Aligned_cols=66 Identities=23% Similarity=0.244 Sum_probs=46.1
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.+. | .-|.++||+.||.+|++.|++|+||++|.+..|++||+|..+++=..+..+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 377777766543 2 35899999999999999999999999999999999999998877777777764
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.45 E-value=2.6e-07 Score=94.48 Aligned_cols=131 Identities=13% Similarity=0.079 Sum_probs=90.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC-CCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM-YPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... +......+.+.. .. . .......|
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~-~~~~~~~~ 149 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS--FK---------E-LDNSNGAC 149 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB--EE---------E-EECTTSTT
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc--ee---------c-cCCCCCCc
Confidence 37899999999999999999999999999999999999985311 110011000000 00 0 00123356
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCccChhhhcc--CCeeEEe--ccccHHHhhccceeecCCChhHHHHHH
Q 002172 571 EHKYEIVKRL-QARKHICGMTGDGVNDAPALKK--ADIGIAV--ADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K~~iV~~l-q~~g~~V~m~GDGvNDapALk~--AdVGIam--g~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+.|.+.+..+ .-....|.|+||+.||.+|++. +.+|+++ +++.+..+..||+++ +++..+...+
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 6777777655 5456789999999999999975 3345544 566777888899998 5677766543
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=6.3e-07 Score=94.11 Aligned_cols=146 Identities=21% Similarity=0.206 Sum_probs=99.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CC-cccc-CCc-------------------c-c
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PS-SALL-GQN-------------------K-D 547 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~-~~l~-g~~-------------------~-~ 547 (956)
.+.+.+.++++++++.|+++.++||.....+..+.+.+|+..... .. .+.. ++. . .
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 467889999999999999999999999999999999999853110 00 0000 100 0 0
Q ss_pred ccc------------------CcccHHHHhhh----cceE-----EeeCh--hhHHHHHHHHhhC-C---CEEEEEcCCc
Q 002172 548 ESI------------------VALPVDELIEK----ADGF-----AGVFP--EHKYEIVKRLQAR-K---HICGMTGDGV 594 (956)
Q Consensus 548 ~~~------------------~~~~~~~~~~~----~~vf-----ar~~P--e~K~~iV~~lq~~-g---~~V~m~GDGv 594 (956)
-.. ....++++++. .++. ..+.| ..|...++.+.++ | ..|.|+||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 000 01112222222 1222 23334 3577777776543 2 4588999999
Q ss_pred cChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 595 NDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
||.+|++.|++|++|+++.+..++.||+++.+++-..+.++++
T Consensus 180 nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999888888999999998776667777664
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.44 E-value=1e-06 Score=90.04 Aligned_cols=128 Identities=15% Similarity=0.131 Sum_probs=94.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... .......+.+... ...-.-.|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~~~~--------------~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDSDRV--------------VGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE-EEEEEEECTTSCE--------------EEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce-ecceeEEcCCceE--------------EeeecCCCc
Confidence 6799999999999999 99999999999999999999998531 1011111111000 000124688
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
.|...++.+...+..|.|+||+.||.+|.+.|++++++....+....+.+++ .-+++..+...+
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l 196 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFP-AVHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSC-EECSHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhc-cccchHHHHHHH
Confidence 9999999998888899999999999999999999999865444444445554 236688877765
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.43 E-value=6.9e-07 Score=96.90 Aligned_cols=67 Identities=21% Similarity=0.199 Sum_probs=54.7
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccce--eecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi--vL~~~~~~~iv~ai~ 637 (956)
..|..-++.+.+. | .-|+++||+.||.+|++.|++||||++|.+..|++||. |..+++=..+..+|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4587777776553 3 35899999999999999999999999999999999984 556666677777764
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.43 E-value=1.3e-06 Score=93.06 Aligned_cols=65 Identities=23% Similarity=0.276 Sum_probs=54.1
Q ss_pred HHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 573 KYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 573 K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
|..-++.+.+. ..-|+++||+.||.+|++.|++|+||+++.+..|+.||+|..+++-..+..+++
T Consensus 184 K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 184 KAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 44445555432 345899999999999999999999999999999999999998888888888775
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.39 E-value=4.4e-07 Score=98.41 Aligned_cols=66 Identities=23% Similarity=0.231 Sum_probs=57.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.+. | .-|+++||+.||.+|++.|++||||++|.+..|++||+|..+++=..+..+++
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 488877776654 3 35899999999999999999999999999999999999998888888888774
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.39 E-value=4.2e-07 Score=94.81 Aligned_cols=128 Identities=20% Similarity=0.251 Sum_probs=93.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... ...-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR--LTVIAGDDSVE-----------------RGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT--CSEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh--eeeEEeCCCCC-----------------CCCCCHH
Confidence 5788999999999999999999999999999999999997432 11222221110 0111234
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe---eEEecccc-HHHhh-ccceeecCCChhHHHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADAT-DAARS-ASDIVLTEPGLSVIISAVLTSR 640 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV---GIamg~gt-d~Ak~-aADivL~~~~~~~iv~ai~~gR 640 (956)
--..+.+.+.-....|.|+||+.||..|+++|++ +|++|.+. +..++ .||+++ +++..+...++.++
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 4455666666555679999999999999999999 88888443 44443 799998 67899888886653
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.38 E-value=2.7e-07 Score=98.84 Aligned_cols=66 Identities=29% Similarity=0.334 Sum_probs=57.0
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.+. | .-|.++||+.||.+|++.|++|+||++|.+.+|++||+|..+++=..+..+++
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 576766665543 2 35899999999999999999999999999999999999999888888888875
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3.6e-07 Score=93.38 Aligned_cols=128 Identities=14% Similarity=0.142 Sum_probs=93.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+........++ +.+.. ...-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~-~~~~~-----------------~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL-GRDEA-----------------PPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE-CTTTS-----------------CCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE-eCCCC-----------------CCCCCHH
Confidence 45689999999999999999999999999999999999984211001111 11100 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEeccccHHHhhccceeecCCChhHHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~g 639 (956)
--..+.+.+.-....|.|+||+.||..|.+.|++ +|+|+++.+..++.||+++ +++..++..+...
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 3344555554444568999999999999999999 9999987777788899998 6788888877543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.34 E-value=6.5e-07 Score=95.94 Aligned_cols=66 Identities=24% Similarity=0.288 Sum_probs=56.2
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.+. ..-|.++||+.||.+|++.|++|+||+++.+..|++||+|..+++=..+..+++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~ 269 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELK 269 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHH
Confidence 476666655443 346899999999999999999999999999999999999998888888888875
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.29 E-value=1e-06 Score=96.52 Aligned_cols=67 Identities=25% Similarity=0.234 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..|..-++.+.++ | .-|+++||+.||.+|++.|++||||++|.+..|++||+|..+++=..+..+|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4587777766543 3 34899999999999999999999999999999999999998877778888875
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-06 Score=91.23 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=85.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe----
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG---- 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar---- 567 (956)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+..+.+-...+.- ..+ ..+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~-~~~--------------~~~~~~~~~~ 150 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF-YFN--------------GEYAGFDETQ 150 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEE-CTT--------------SCEEEECTTS
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEE-cCC--------------CcEecCCCCC
Confidence 6899999999999999999999999999999999999998531110000000 000 000111
Q ss_pred --eChhhHHHHHHHHhhC-C-CEEEEEcCCccChhhhccCCeeEEeccc--cHHHhhccceeecCCChhHHHHHH
Q 002172 568 --VFPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 568 --~~Pe~K~~iV~~lq~~-g-~~V~m~GDGvNDapALk~AdVGIamg~g--td~Ak~aADivL~~~~~~~iv~ai 636 (956)
+.+..|-++++.+.++ | ..+.|+||+.||.+|.++|+++|+++.+ .+.....+|+++ +++..+...+
T Consensus 151 ~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 151 PTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp GGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred cccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 1123566666655432 4 5689999999999999999998888732 234445689988 4566655443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.23 E-value=3e-06 Score=91.83 Aligned_cols=66 Identities=23% Similarity=0.195 Sum_probs=56.6
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.|...++.+.+. | ..|.++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 688877777653 2 35899999999999999999999999999999999999998887778887774
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.22 E-value=3.9e-06 Score=87.35 Aligned_cols=110 Identities=17% Similarity=0.148 Sum_probs=77.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceE-EeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf-ar~~P 570 (956)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- ........ +..... ... ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~~~---~~~~~g----------~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPEYR---DGRYTG----------RIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEEEE---TTEEEE----------EEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceEEE---CCEEee----------eecCCCCcc
Confidence 5799999999999999999999999999999999999998521 10000000 000000 000 11235
Q ss_pred hhHHHHHHHHh-hCC------CEEEEEcCCccChhhhccCCeeEEeccccHH
Q 002172 571 EHKYEIVKRLQ-ARK------HICGMTGDGVNDAPALKKADIGIAVADATDA 615 (956)
Q Consensus 571 e~K~~iV~~lq-~~g------~~V~m~GDGvNDapALk~AdVGIamg~gtd~ 615 (956)
..|.+.++.+. +.| ..|.|+||+.||.+|++.|++++++......
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l 209 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGL 209 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHH
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHH
Confidence 67877765543 334 5799999999999999999999999754443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.17 E-value=2.2e-06 Score=88.49 Aligned_cols=127 Identities=9% Similarity=0.080 Sum_probs=90.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... ...-.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFY--FDAIVGSSLDG-----------------KLSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECTTS-----------------SSCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhh--eeeeeccCCCC-----------------CCCCCH
Confidence 36789999999999999999999999999999999999998521 11111111100 000123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe---eEEeccccHH--HhhccceeecCCChhHHHHHHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV---GIamg~gtd~--Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
+--..+.+.+.-....|.|+||+.||..|.+.|++ +|++|.+... .+..||+++ +++..+...+..
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 33344555555444579999999999999999999 8888854433 357899998 568888877753
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.14 E-value=8e-07 Score=100.58 Aligned_cols=108 Identities=13% Similarity=0.149 Sum_probs=75.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe---
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--- 567 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar--- 567 (956)
..++|++++.|+.|+++|++|+|+||.....+..+|+++|+..+.-+. .+.|..+...- +-..-.+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~-~Vig~~l~~~~----------dG~~tg~~~~ 288 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEE-KVLGLRLMKDD----------EGKILPKFDK 288 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGG-GEEEECEEECT----------TCCEEEEECT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcc-eEEEeEEEEec----------CCceeeeecC
Confidence 457899999999999999999999999999999999999975432222 22232221000 0011111
Q ss_pred ----eChhhHHHHHHHHhhC--C-CEEEEEcCCccChhhhcc-CCeeEEe
Q 002172 568 ----VFPEHKYEIVKRLQAR--K-HICGMTGDGVNDAPALKK-ADIGIAV 609 (956)
Q Consensus 568 ----~~Pe~K~~iV~~lq~~--g-~~V~m~GDGvNDapALk~-AdVGIam 609 (956)
+..+.|...++.+-+. | ..|.++|||.||.|||++ +|.|+++
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 3467899999887433 2 247788999999999986 6666655
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.12 E-value=5e-06 Score=88.44 Aligned_cols=126 Identities=13% Similarity=0.168 Sum_probs=87.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+.... ...++.+.... ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~-----------------~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP-----------------AGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-hHheecCCccC-----------------CCCCCHH
Confidence 56799999999999999999999999988888888887764221 11122111100 0111244
Q ss_pred hHHHHHHHHhhCC-CEEEEEcCCccChhhhccCC---eeEEeccc------------------------cHHHhhc-cce
Q 002172 572 HKYEIVKRLQARK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-SDI 622 (956)
Q Consensus 572 ~K~~iV~~lq~~g-~~V~m~GDGvNDapALk~Ad---VGIamg~g------------------------td~Ak~a-ADi 622 (956)
--..+.+.+.-.. ..|.|+||+.||..|++.|+ ++++++.+ .+..+++ ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 4456666666555 67999999999999999999 67777754 2333334 999
Q ss_pred eecCCChhHHHHHHH
Q 002172 623 VLTEPGLSVIISAVL 637 (956)
Q Consensus 623 vL~~~~~~~iv~ai~ 637 (956)
++ +++..+...+.
T Consensus 245 v~--~~~~el~~~l~ 257 (267)
T 1swv_A 245 TI--ETMQELESVME 257 (267)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred ec--cCHHHHHHHHH
Confidence 98 56787777664
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=3.3e-06 Score=86.61 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=85.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.+++.|+++.++|+........+.+.+|+... ....+.+.... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~-----------------~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP-----------------YSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS-----------------CCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhh--CcEEEeccccC-----------------CCCCChH
Confidence 5678999999999999999999999998888888888887421 11112111100 0011134
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe----ccccHHHhhccceeecCCChhHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~gtd~Ak~aADivL~~~~~~~iv~ 634 (956)
--..+.+.+.-....|.++||+.||.+|++.|++++++ +++.+..+..||+++. ++..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHhH
Confidence 44555666654556789999999999999999999998 4444456778999884 4555443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.06 E-value=4.4e-06 Score=86.40 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=87.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDIN--KINIVTRDDVS-----------------YGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTT--SSCEECGGGSS-----------------CCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhh--hheeeccccCC-----------------CCCCChH
Confidence 5678999999999999999999999999989999999988532 11122111110 0111133
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe---eEEec-cccHHHhhc-cceeecCCChhHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARSA-SDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV---GIamg-~gtd~Ak~a-ADivL~~~~~~~iv~ai~~ 638 (956)
--..+.+.+.-....|.|+||+.||..|++.|++ +|++| ++.+..++. ||+++ +++..+...++.
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 221 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence 3334444444344568999999999999999999 66666 444444444 99998 668888877754
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.03 E-value=3.5e-06 Score=88.79 Aligned_cols=123 Identities=18% Similarity=0.162 Sum_probs=86.0
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.|++.+.++.|++.|+++.++|+.....+..+.+++|+... ...++.+.+... ..-.|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~~-----------------~Kp~~ 173 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSLPE-----------------IKPHP 173 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTSSS-----------------CTTSS
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe--EEEEEecccCCC-----------------CCcCH
Confidence 36779999999999999999999999999999999999998531 111222211100 01124
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Eecc----ccHHHhhccceeecCCChhHHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVAD----ATDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~----gtd~Ak~aADivL~~~~~~~iv~ 634 (956)
+--..+.+.+.-....|.|+||+.||.+|.+.|+++. .+.. +.+..+..+|+++ +++..+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~~ 240 (243)
T 2hsz_A 174 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILK 240 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGG
T ss_pred HHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHHH
Confidence 4445566666555567999999999999999999884 4443 3344567899998 44655543
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.00 E-value=4.4e-06 Score=85.59 Aligned_cols=114 Identities=4% Similarity=-0.065 Sum_probs=78.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.+++.|+++.++|++ ..+..+.+.+|+... ...++.+.+.. ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY--FDAIADPAEVA-----------------ASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG--CSEECCTTTSS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH--cceEeccccCC-----------------CCCCChH
Confidence 46799999999999999999999998 334566677777421 11122111110 0011133
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCC
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~ 627 (956)
--..+.+.+.-....|.++||+.||.+|++.|+++++|.++.+..+ .||+++.+.
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~ 204 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDT 204 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSG
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCH
Confidence 3344555555445568999999999999999999999987777777 899988543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.99 E-value=4.7e-06 Score=85.38 Aligned_cols=123 Identities=16% Similarity=0.089 Sum_probs=79.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhh
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 572 (956)
+.+++.+.++.+++.|+++.++|++.........+.+|+... ....+.+.... ...-.|+-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----------------~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDW--FDIIIGGEDVT-----------------HHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTC--CSEEECGGGCS-----------------SCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhh--eeeeeehhhcC-----------------CCCCChHH
Confidence 468999999999999999999999998888888888887422 11111111000 00011222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe----ccccHHHhhc-cceeecCCChhHHHHHH
Q 002172 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSA-SDIVLTEPGLSVIISAV 636 (956)
Q Consensus 573 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~gtd~Ak~a-ADivL~~~~~~~iv~ai 636 (956)
-..+.+.+.-....|.++||+.||.+|++.|++++++ +++.+..+.. ||+++. ++..+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 2344455444445688999999999999999998877 3333444444 899884 455555544
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.97 E-value=9.1e-06 Score=85.24 Aligned_cols=137 Identities=13% Similarity=0.041 Sum_probs=90.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHh--hhcceEEeeC
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELI--EKADGFAGVF 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~--~~~~vfar~~ 569 (956)
+++|++.++++.|++.|+++.++|+.....+..+.+ |+.. + ..++.+..... +..+.... .+...+-+-.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~---~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFD---NDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECS---SSBCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEc---CCceEEecCCCCcccccccc
Confidence 689999999999999999999999999888888777 6632 1 12222111000 00000000 0001011112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhc--cceeecCCChhHHHHHHHH
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~a--ADivL~~~~~~~iv~ai~~ 638 (956)
+.+|.++++.+......|.|+||+.||.+|.++|++.++.....+..+.. +|+++ +++..+...+..
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 56788999999877889999999999999999999988753222233333 77777 668888877643
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.6e-05 Score=84.80 Aligned_cols=64 Identities=25% Similarity=0.303 Sum_probs=52.4
Q ss_pred hhHHHHHHHHhhC-C-----CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQAR-K-----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~~-g-----~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.+|..-++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+ . +++++..+++-..+.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 4778777777654 3 569999999999999999999999998888 4 7888888777777776664
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.4e-05 Score=82.79 Aligned_cols=113 Identities=12% Similarity=0.075 Sum_probs=74.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+... ...++.+.+.. ...-.|+
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~Kp~~~ 150 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDD--FHAIVDPTTLA-----------------KGKPDPD 150 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTT--CSEECCC--------------------------CC
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhh--cCEEeeHhhCC-----------------CCCCChH
Confidence 4789999999999999999999999755 6677788887532 11122111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecC
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~ 626 (956)
-=..+.+.+.-....|.|+||+.||..|.+.|+++++|.++.+..+ .||+++.+
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s 204 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQ 204 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSS
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCC
Confidence 3345566665555678999999999999999999999986666555 89999854
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.96 E-value=6.1e-06 Score=85.49 Aligned_cols=126 Identities=9% Similarity=0.029 Sum_probs=91.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAVR-----------------LYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEecccC-----------------CCCcCHH
Confidence 56789999999999999999999999999888888888885321 1112111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe----ccccHHHhhccceeecCCChhHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
--..+.+.+.-....|.|+||+.||..|.+.|++++++ +++.+..+..+|+++ +++..+...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 34455566654456789999999999999999999999 455555566799998 678888887754
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.95 E-value=6.7e-06 Score=85.89 Aligned_cols=125 Identities=14% Similarity=0.047 Sum_probs=86.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... ...-.|
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~~ 169 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRY--FKYIAGSNLDG-----------------TRVNKN 169 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECTTS-----------------CCCCHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhh--EEEEEeccccC-----------------CCCCCH
Confidence 35789999999999999999999999999999999999998531 11111111100 001112
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCe---eEEeccccH--HHhhccceeecCCChhHHHHHH
Q 002172 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI---GIAVADATD--AARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdV---GIamg~gtd--~Ak~aADivL~~~~~~~iv~ai 636 (956)
+--..+.+.+.-. ...|.++||+.||..|.+.|++ ++++|.+.. ..+..+|+++ +++..++..+
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIV--ENVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEE--SSSTTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEE--CCHHHHHHHh
Confidence 2223455555545 5678999999999999999999 677664443 3357899998 4577666554
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.94 E-value=9.9e-06 Score=83.98 Aligned_cols=125 Identities=14% Similarity=0.068 Sum_probs=88.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
-++.|++.++++.|++.|+++.++|+.....+..+.+++|+... -..++.+.+.. ...-.|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~Kp~~ 142 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY--FDLIVGGDTFG-----------------EKKPSP 142 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTSSC-----------------TTCCTT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH--heEEEecCcCC-----------------CCCCCh
Confidence 35789999999999999999999999999888899999997421 11122211110 011234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccc--cHHHhhccceeecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g--td~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
+--..+.+.+.-....|.|+||+.||.+|.++|++. |++..| .... ..+|+++ +++..+...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 143 TPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 555566666665556789999999999999999988 666532 2212 5688888 56777776653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.94 E-value=7.8e-06 Score=84.38 Aligned_cols=125 Identities=11% Similarity=0.083 Sum_probs=88.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
-++.|++.+.++.|++.|+++.++|+........+.+.+|+.... ..++.+.+.. ...-.|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 155 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEVR-----------------LFKPHQ 155 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTCH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhcc-----------------cCCCCh
Confidence 367899999999999999999999999999888888999985311 1111111100 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe----ccccHHHhhccceeecCCChhHHHHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam----g~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+--..+.+.+.-....|.|+||+.||..|.++|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 333455566654456689999999999999999999998 344444556889988 5677776554
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.93 E-value=8.6e-06 Score=88.23 Aligned_cols=131 Identities=16% Similarity=0.175 Sum_probs=88.2
Q ss_pred CCCccHHHHHHHHHhC-CCeEEEEcCC---------------------ChHHHHHHHHHhCCCCCCCCCccccCCccccc
Q 002172 492 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDES 549 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~a-GI~v~miTGD---------------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~ 549 (956)
.+++++.+.++.+++. |+++.+.|.+ ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 5678999999999988 9998888876 3334445555555521100000000000
Q ss_pred cCcccHHHHhhhcceEEeeCh--hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhcccee
Q 002172 550 IVALPVDELIEKADGFAGVFP--EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (956)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~~P--e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADiv 623 (956)
....+....| ..|...++.+.++ | ..|+|+||+.||.+|++.|++|++|+++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0012333333 3566666555443 3 458999999999999999999999999999999999999
Q ss_pred ecCCChhHHHHHHH
Q 002172 624 LTEPGLSVIISAVL 637 (956)
Q Consensus 624 L~~~~~~~iv~ai~ 637 (956)
+.+++-..+.++++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 98887777877774
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.93 E-value=6.9e-06 Score=82.72 Aligned_cols=119 Identities=16% Similarity=0.090 Sum_probs=82.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|++...... ..+.+|+... ....+.+.+.. ...-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~--f~~~~~~~~~~-----------------~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY--FTEILTSQSGF-----------------VRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG--EEEEECGGGCC-----------------CCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh--eeeEEecCcCC-----------------CCCCCcH
Confidence 46799999999999999999999999988777 7788887421 01111111000 0011133
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccccHHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
--..+.+.++-....|.++||+.||.+|++.|+++ |+|++|. . .||+++ +++..+...+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 33455666655555689999999999999999998 8888766 2 689887 4566665543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.90 E-value=2.7e-05 Score=80.54 Aligned_cols=124 Identities=18% Similarity=0.148 Sum_probs=88.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.+.+. ....-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSEEA-----------------GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHHHH-----------------TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEecccc-----------------CCCCcCHH
Confidence 5779999999999999 999999999999888888888874211 111111000 00111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCC---eeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~Ad---VGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
--..+.+.+.-....|.|+||+. ||..|.+.|+ ++++++++.+..++.+|+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 33455566654456799999997 9999999999 67777777777777899998 56888777664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.87 E-value=1.8e-05 Score=81.87 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=78.2
Q ss_pred CCCccHHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+.... ...+.+.+.. .+..|
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~------------------~~~k~ 152 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF--PFGAFADDAL------------------DRNEL 152 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC--SCEECTTTCS------------------SGGGH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc--CcceecCCCc------------------Cccch
Confidence 4679999999999999 9999999999998888888888885321 1112221110 00001
Q ss_pred hhH--HHHHHHHh--hCCCEEEEEcCCccChhhhccCC---eeEEeccccHHHh-h-ccceeecCCChhHHHHHH
Q 002172 571 EHK--YEIVKRLQ--ARKHICGMTGDGVNDAPALKKAD---IGIAVADATDAAR-S-ASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K--~~iV~~lq--~~g~~V~m~GDGvNDapALk~Ad---VGIamg~gtd~Ak-~-aADivL~~~~~~~iv~ai 636 (956)
..+ ..+.+.+. -....|.|+||+.||.+|.+.|+ |+++.+.+..... . .+|+++. ++..+...+
T Consensus 153 ~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 153 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 111 22334443 23356899999999999999999 4555553333222 2 3898884 344454444
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.1e-05 Score=81.42 Aligned_cols=122 Identities=8% Similarity=0.030 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHY--FDSIIGSGDTG-----------------TIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEETSSS-----------------CCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhh--eeeEEcccccC-----------------CCCCChH
Confidence 5789999999999999999999999999999999999998531 11111111100 0111233
Q ss_pred hHHHHHHHHhhCCC-EEEEEcCCccChhhhccCCe-eEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQARKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~g~-~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
--..+.+.+.-... .|.|+||+.||..|.++|++ +|.++.+.+ ..+|.++ +++..+...+.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 33556666655555 68999999999999999997 677776554 3567777 56888777663
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.85 E-value=5e-05 Score=81.84 Aligned_cols=66 Identities=20% Similarity=0.128 Sum_probs=32.8
Q ss_pred hHHHHHHHHhhC-C----CE--EEEEcCCccChhhhccCCeeEEecccc---HHHhhc--cc-eeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K----HI--CGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--SD-IVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g----~~--V~m~GDGvNDapALk~AdVGIamg~gt---d~Ak~a--AD-ivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.+. | .. |.++||+.||.+|++.|++||+|+++. +..++. || ++..+++-..+..+++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 465555554432 2 34 899999999999999999999999887 555543 78 8887777777777664
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.84 E-value=2.1e-05 Score=82.30 Aligned_cols=126 Identities=13% Similarity=0.086 Sum_probs=83.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+...-+. |+........++.+.+.. ...-.|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-----------------~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-----------------YGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-----------------CCCCChH
Confidence 6789999999999999999999999887777666666 775321001222222111 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccccH----HHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATD----AARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd----~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
--..+.+.+.-....|.|+||+.||..|.+.|+++ |.+..|.. ..+..||+++ +++..+...+.
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 33445555544455689999999999999999985 55554332 2334699998 66888877663
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.5e-05 Score=81.56 Aligned_cols=127 Identities=10% Similarity=0.030 Sum_probs=81.6
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.....+..++.+.+.. ...-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~-----------------~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK-----------------YGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC-----------------CCCCCC
Confidence 36789999999999999999999999887766666666 775321001122221110 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecccc----HHHhhccceeecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT----DAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gt----d~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
+--..+.+.+.-....|.|+||+.||..|.++|+++ |.+..|. +..+..||+++ +++..+...+.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 334455666655556689999999999999999975 4444332 22334799998 56887776664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.84 E-value=8.7e-06 Score=82.56 Aligned_cols=121 Identities=15% Similarity=0.076 Sum_probs=84.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF--FDIVLSGEEFK-----------------ESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGCS-----------------SCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh--eeeEeeccccc-----------------CCCCChH
Confidence 5689999999999999999999999999999999999998531 11122111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-c-ccHHHhhccceeecCCChhHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARSASDIVLTEPGLSVII 633 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~-gtd~Ak~aADivL~~~~~~~iv 633 (956)
--..+.+.+.-....|.++||+.||..|.+.|++++.+. . +....+..+|+++ +++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHH
Confidence 344556666555567899999999999999999988875 2 2444446789988 4455543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.3e-05 Score=80.93 Aligned_cols=124 Identities=9% Similarity=0.065 Sum_probs=82.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
.+.+++.+.++.|++.|+++.++|+.. ........+.+|+.... ..++.+.+.. ...-
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp 159 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEVL-----------------SYKP 159 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHHT-----------------CCTT
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheeccccC-----------------CCCC
Confidence 357999999999999999999999999 88888888888874211 1111110000 0011
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCeeEEe---ccccHHHhhccceeecCCChhHHHHHH
Q 002172 569 FPEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVGIam---g~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
.|+--..+.+.+.-....|.++||+. ||..|++.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 229 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVI 229 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHH
Confidence 23322344444443345689999999 999999999999998 322222344578877 5677777665
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.82 E-value=3.6e-05 Score=81.77 Aligned_cols=126 Identities=12% Similarity=0.138 Sum_probs=86.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.|++.|+++.++|+.....+..+-+.+|+.... ...++.+.... ...-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~-----------------~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT-PASTVFATDVV-----------------RGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-CSEEECGGGSS-----------------SCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-CceEecHHhcC-----------------CCCCCHH
Confidence 57789999999999999999999999998888888888864321 11112111100 0011133
Q ss_pred hHHHHHHHHhhCC-CEEEEEcCCccChhhhccCC---eeEEeccc------------------------cHHHh-hccce
Q 002172 572 HKYEIVKRLQARK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAAR-SASDI 622 (956)
Q Consensus 572 ~K~~iV~~lq~~g-~~V~m~GDGvNDapALk~Ad---VGIamg~g------------------------td~Ak-~aADi 622 (956)
--..+.+.+.-.. ..|.|+||+.||..|.+.|+ |+|++|.+ .+..+ ..+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 3345566666555 77999999999999999999 55666632 23333 34999
Q ss_pred eecCCChhHHHHHHH
Q 002172 623 VLTEPGLSVIISAVL 637 (956)
Q Consensus 623 vL~~~~~~~iv~ai~ 637 (956)
++ +++..+...+.
T Consensus 253 v~--~~~~el~~~l~ 265 (277)
T 3iru_A 253 VI--DSVADLETVIT 265 (277)
T ss_dssp EE--SSGGGTHHHHH
T ss_pred Ee--cCHHHHHHHHH
Confidence 99 66888777764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.3e-05 Score=86.12 Aligned_cols=129 Identities=11% Similarity=0.009 Sum_probs=86.9
Q ss_pred CCCCccHHHHHHHHHhCCC--eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee
Q 002172 491 DPPRHDSAETIRRALNLGV--NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI--~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+... ...++.+...... ...+.-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~--fd~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADL--FDGLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTS--CSEEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccc--cceEEEeccCCCc-------------ccCCCc
Confidence 3678999999999999999 9999999999999999999998532 1122221111000 001111
Q ss_pred ChhhHHHHHHHHhhCC-CEEEEEcCCccChhhhccCCeeEEeccccHHH------hhccceeecCCChhHHHHHH
Q 002172 569 FPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g-~~V~m~GDGvNDapALk~AdVGIamg~gtd~A------k~aADivL~~~~~~~iv~ai 636 (956)
.|+-=..+.+.+.-.. ..|.|+||+.||..|.++|++|.+|+.+.+.. ...||+++ +++..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 2333344555555454 67999999999999999999999887333222 33788888 5566665443
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=2.8e-05 Score=81.23 Aligned_cols=124 Identities=13% Similarity=0.060 Sum_probs=83.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV--LDSCLSADDLK-----------------IYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH--cCEEEEccccC-----------------CCCCCHH
Confidence 5789999999999999999999999999988888899988421 11122111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE---eccccHHHhhcc-ceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA---VADATDAARSAS-DIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa---mg~gtd~Ak~aA-DivL~~~~~~~iv~ai 636 (956)
--..+.+.+.-....|.|+||+.||..|.+.|++... .+.+.+..+..+ |+++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 4445556665445568899999999999999996543 343322233456 8888 5577776655
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.77 E-value=3.6e-05 Score=76.81 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhC--CCCCCCCCccccCCccccccCccc
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLG--MGTNMYPSSALLGQNKDESIVALP 554 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lG--i~~~~~~~~~l~g~~~~~~~~~~~ 554 (956)
++.|++.++++.|++.|+++.++|+... ..+..+.+++| +..- +......+.+..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~~~~------- 98 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI-FMCPHGPDDGCA------- 98 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE-EEECCCTTSCCS-------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EEcCCCCCCCCC-------
Confidence 5789999999999999999999999875 45566667777 3210 000000000000
Q ss_pred HHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe---eEEeccccHHHh----hccceeecCC
Q 002172 555 VDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----SASDIVLTEP 627 (956)
Q Consensus 555 ~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV---GIamg~gtd~Ak----~aADivL~~~ 627 (956)
...-.|+-=..+.+.+.-....+.|+||+.||..|.++|++ +|+.|.+..... ..+|+++ +
T Consensus 99 ----------~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 99 ----------CRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp ----------SSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred ----------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 01111222244555555555679999999999999999995 666665544443 4579998 5
Q ss_pred ChhHHHHHHH
Q 002172 628 GLSVIISAVL 637 (956)
Q Consensus 628 ~~~~iv~ai~ 637 (956)
++..++..+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6888777663
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.74 E-value=1.8e-05 Score=81.96 Aligned_cols=124 Identities=8% Similarity=0.046 Sum_probs=85.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG--FDHLLSVDPVQ-----------------VYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEESGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhh--hheEEEecccC-----------------CCCCCHH
Confidence 5789999999999999999999999999888888889888421 11122111100 1112244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec----cccHHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg----~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
--..+.+.+.-....|.|+||+.||..|.+.|+++.++- +..+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 445556666544556889999999999999999998873 22233345689888 4577666544
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.72 E-value=4.6e-05 Score=80.57 Aligned_cols=128 Identities=16% Similarity=0.065 Sum_probs=86.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ....++.+.+.. ....-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~~~i~~~~~~~----------------~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL-AGEHIYDPSWVG----------------GRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH-HCSCEECGGGGT----------------TCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh-ccceEEeHhhcC----------------cCCCCChH
Confidence 4678999999999999999999999999999999999887421 000011111100 00111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccc-------c-HHHhhccceeecCCChhHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA-------T-DAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g-------t-d~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
--..+.+.+.-....|.|+||+.||..|.+.|+++ |.+..| . +..+..+|+++ +++..+...+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 23445555544446799999999999999999998 555433 2 23344589998 668888887753
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00015 Score=75.70 Aligned_cols=124 Identities=14% Similarity=0.159 Sum_probs=83.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDF--FEHVIISDFEG-----------------VKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT-----------------CCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhh--ccEEEEeCCCC-----------------CCCCCHH
Confidence 5679999999999999999999999998888888888887421 11112111100 0111123
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCeeEEe---ccccHHHh---hccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAAR---SASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVGIam---g~gtd~Ak---~aADivL~~~~~~~iv~ai 636 (956)
-=..+.+.+.-....|.|+||+. ||..|.+.|+++.+. |.+..... ..+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l 224 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVL 224 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHH
Confidence 22344555554455689999998 999999999998554 33333333 2689888 5577776655
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.63 E-value=8.9e-05 Score=77.37 Aligned_cols=120 Identities=9% Similarity=0.040 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC--
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF-- 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~-- 569 (956)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+ .++.+.. +....
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~----~~~~~~~-------------------~~~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD----VIIGSDI-------------------NRKYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS----CCCCHHH-------------------HTCCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee----EEEEcCc-------------------CCCCCCC
Confidence 5679999999999986 99999999999999999999998411 1111100 01111
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccH---------H-HhhccceeecCCChhHHHHHHH
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD---------A-ARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd---------~-Ak~aADivL~~~~~~~iv~ai~ 637 (956)
|+-=..+.+.+.-....|.|+||+.||..|.+.|+++++|.+..+ . .+..+|+++ +++..+...+.
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~ 247 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLR 247 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhc
Confidence 222223333333334568999999999999999999999864211 1 356789999 67888888774
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.61 E-value=6.5e-05 Score=78.74 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.|++. +++.++|+........+.+.+|+.- ..++.+.... ...-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f----~~~~~~~~~~-----------------~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW----DMLLCADLFG-----------------HYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC----SEECCHHHHT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc----ceEEeecccc-----------------cCCCCHH
Confidence 5678999999999985 9999999999988888889998841 1111110000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEecc-----cc---HH--HhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD-----AT---DA--ARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~-----gt---d~--Ak~aADivL~~~~~~~iv~ai~ 637 (956)
--..+.+.+.-...-|.|+||+.||..|.+.|+++++|.+ |. +. .+..+|+++ +++..+...+.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 3344555555445669999999999999999999999974 22 11 256789998 66888877663
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.60 E-value=7.8e-05 Score=76.54 Aligned_cols=117 Identities=12% Similarity=0.009 Sum_probs=79.6
Q ss_pred CCCccHHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC-
Q 002172 492 PPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF- 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~- 569 (956)
++.|++.+.++.|++.| +++.++|+........+-+.+|+.... .. +++.-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~------------------------~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF--DH------------------------IEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC--SE------------------------EEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh--he------------------------eeecCCC
Confidence 56889999999999999 999999999888888888888874210 00 122212
Q ss_pred -hhhHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCeeEEec-------cccHHHhhc-cceeecCCChhHHHHHH
Q 002172 570 -PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVA-------DATDAARSA-SDIVLTEPGLSVIISAV 636 (956)
Q Consensus 570 -Pe~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVGIamg-------~gtd~Ak~a-ADivL~~~~~~~iv~ai 636 (956)
|+-=..+.+.+.-...-|.|+||+. ||..|.+.|+++.++- .+....+.. +|+++ +++..++..+
T Consensus 159 k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 159 TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 2222334444443445689999997 9999999999998762 222222333 48888 5577776543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0001 Score=76.12 Aligned_cols=123 Identities=12% Similarity=0.071 Sum_probs=84.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|+ .|+++.++|+.........-+.+|+... ...++.+.+.. ...-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY--FKKIILSEDLG-----------------VLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGTT-----------------CCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh--ceeEEEeccCC-----------------CCCCCHH
Confidence 56789999999999 9999999999998888888888888532 11111111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCeeEEeccccH--HHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVGIamg~gtd--~Ak~aADivL~~~~~~~iv~ai 636 (956)
--..+.+.+.-....|.|+||+. ||..|.++|++++++.+... ..+..+|+++ +++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 23334444443445789999996 99999999999999973322 4556799999 5577766554
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00039 Score=70.16 Aligned_cols=134 Identities=13% Similarity=0.204 Sum_probs=79.8
Q ss_pred cceeeCceeEEeeeeeecc--CCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHH--hhccceeEeecCCCCCcce
Q 002172 336 GTLTLNKLSVDKNLIEIFA--KGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEA--RANIQEVHFLPFNPTDKRT 411 (956)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~--~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~--~~~~~~l~~~pF~s~~kr~ 411 (956)
||||+|+++|..+. .+. .+.+.++++.+++.++.. +.||+..||+.++...... ....+..+..| . +-.
T Consensus 1 GTLT~G~p~V~~v~--~~~~~~~~~~~~lL~laaa~E~~-SeHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G-~Gv 73 (185)
T 2kmv_A 1 SFTMHGTPVVNQVK--VLTESNRISHHKILAIVGTAESN-SEHPLGTAITKYCKQELDTETLGTCIDFQVVP---G-CGI 73 (185)
T ss_dssp CCCCSCCCEEEEEE--ECSCTTTSCHHHHHHHHHHGGGS-SSCHHHHHHHHHHHHHHTCSCCCCCBCCEEET---T-TEE
T ss_pred CCCcCCcEEEEEEE--ecCCcCCCCHHHHHHHHHHHHcc-CCCHHHHHHHHHHHhhcCCCCCCCccceEEec---c-ceE
Confidence 89999999998754 332 245777888887776544 4579999999876321000 00111112222 1 111
Q ss_pred EEEEEcCC-----------------------------------------------CcEEEEEeCcHHHHHHhhcCchHHH
Q 002172 412 ALTYIDSE-----------------------------------------------GKMHRVSKGAPEQILNLVRNKSEIE 444 (956)
Q Consensus 412 sv~~~~~~-----------------------------------------------g~~~~~~KGa~e~il~~~~~~~~~~ 444 (956)
...+...+ .+.+.+..|+++.+.+..-. +.
T Consensus 74 ~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---i~ 150 (185)
T 2kmv_A 74 SCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLV---IN 150 (185)
T ss_dssp EEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCC---CC
T ss_pred EEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCC---CC
Confidence 11111100 01146778999987653211 11
Q ss_pred HHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCC
Q 002172 445 RRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDP 492 (956)
Q Consensus 445 ~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~ 492 (956)
+.+.+.++++..+|..++.+|... +++|++++.|+
T Consensus 151 ~~~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 151 NDVNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 234455667888999999999765 89999999995
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.57 E-value=1.9e-05 Score=82.97 Aligned_cols=122 Identities=16% Similarity=0.119 Sum_probs=76.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHhCCCCCCCCCccccCC--ccccccCcccHHHHhhhcceEEee
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQ--NKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~g~--~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
++.|++.+.++.|++.|+++.++|+.........- +..|+... ...++.+. ... ...-
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~--f~~~~~~~~~~~~-----------------~~Kp 172 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL--FSHIVLGDDPEVQ-----------------HGKP 172 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT--SSCEECTTCTTCC-----------------SCTT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh--eeeEEecchhhcc-----------------CCCC
Confidence 57899999999999999999999999866544322 22333211 11111111 000 0011
Q ss_pred ChhhHHHHHHHHhhCC--CEEEEEcCCccChhhhccCC---eeEEeccccHHHhhccceeecCCChhHHHH
Q 002172 569 FPEHKYEIVKRLQARK--HICGMTGDGVNDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g--~~V~m~GDGvNDapALk~Ad---VGIamg~gtd~Ak~aADivL~~~~~~~iv~ 634 (956)
.|+-=..+.+.+.-.. ..|.|+||+.||..|.++|+ |+++++++.+..+..||+++ +++..+..
T Consensus 173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~--~sl~el~~ 241 (250)
T 3l5k_A 173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL--NSLQDFQP 241 (250)
T ss_dssp STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC--SCGGGCCG
T ss_pred ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee--cCHHHhhH
Confidence 1222233333333222 67899999999999999999 66666766666788999998 45555443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0001 Score=77.74 Aligned_cols=122 Identities=13% Similarity=0.127 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~-----------------~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAKR-----------------VFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhh--ccEEEEccccC-----------------CCCCCHH
Confidence 67899999999999 999999999999988888899987421 11112111100 1112244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccc---------------------------cHHHhhccceee
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARSASDIVL 624 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~g---------------------------td~Ak~aADivL 624 (956)
--..+.+.+.-....|.|+||+.||..|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 44455566654445688999999999999999999888643 122345689888
Q ss_pred cCCChhHHHHHH
Q 002172 625 TEPGLSVIISAV 636 (956)
Q Consensus 625 ~~~~~~~iv~ai 636 (956)
+++..+...+
T Consensus 232 --~~~~el~~~l 241 (253)
T 1qq5_A 232 --PALGDLPRLV 241 (253)
T ss_dssp --SSGGGHHHHH
T ss_pred --CCHHHHHHHH
Confidence 5678777665
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=1.4e-05 Score=81.42 Aligned_cols=119 Identities=8% Similarity=0.047 Sum_probs=79.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+... ...++.+.+.. ...-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDTP-----------------KRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGSS-----------------CCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh--ccEEEecCcCC-----------------CCCCCcH
Confidence 5689999999999999 99999999998888888888876321 01111111000 0011133
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEecc----ccHHHhhccceeecCCChhHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD----ATDAARSASDIVLTEPGLSVII 633 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~----gtd~Ak~aADivL~~~~~~~iv 633 (956)
--..+.+.+.-....|.|+||+.||.+|.+.|++++++.+ +.+..++ +|+++. ++..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 3345555555445678999999999999999999998742 2344444 899884 455443
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00015 Score=74.93 Aligned_cols=124 Identities=10% Similarity=0.059 Sum_probs=83.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++. +++.++|+.....+...-+.+|+... ...++.+.+.. ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPF--FKDIFVSEDTG-----------------FQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGG--CSEEEEGGGTT-----------------SCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhh--hheEEEecccC-----------------CCCCChH
Confidence 6788999999999999 99999999999888888888887521 11111111100 0111122
Q ss_pred hHHHHHHHHh-hCCCEEEEEcCCc-cChhhhccCCee-EEeccc--cHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQ-ARKHICGMTGDGV-NDAPALKKADIG-IAVADA--TDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq-~~g~~V~m~GDGv-NDapALk~AdVG-Iamg~g--td~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
--..+.+.+. -....|.|+||+. ||..|.+.|+++ |.++.| .+..+..+|+++ +++..+...+.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 2233333333 2335699999998 999999999995 444433 555667899998 56888777663
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00011 Score=75.64 Aligned_cols=122 Identities=8% Similarity=0.066 Sum_probs=79.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE--eeC
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA--GVF 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa--r~~ 569 (956)
++.+++.+.++.++. ++.++|+........+.+++|+... ....++.+.... .. .-.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~-----------------~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAKDLG-----------------ADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHHHHC-----------------TTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-ccceEEeccccc-----------------cCCCCcC
Confidence 457788888888774 8999999999888888888887421 101111110000 00 011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccccH-------HHhhc-cceeecCCChhHHHHHH
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARSA-SDIVLTEPGLSVIISAV 636 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd-------~Ak~a-ADivL~~~~~~~iv~ai 636 (956)
|+--..+.+.+.-....|.++||+.||.+|++.|+++ |+++.+.+ ..++. ||+++ +++..+...+
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 219 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 219 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHH
Confidence 2233445555554445689999999999999999998 77775543 25555 99998 4567766655
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00014 Score=74.98 Aligned_cols=135 Identities=17% Similarity=0.162 Sum_probs=82.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHH
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~---------------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 556 (956)
++.|++.+++++|++.|+++.++|+.. ...+..+.+++|+. ...........+... .
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~-~---- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSV-E---- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSS-G----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCcc-c----
Confidence 688999999999999999999999998 46677778888874 111111110000000 0
Q ss_pred HHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee--EEeccc---cHHHhhccceeecCCChhH
Q 002172 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVADA---TDAARSASDIVLTEPGLSV 631 (956)
Q Consensus 557 ~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iamg~g---td~Ak~aADivL~~~~~~~ 631 (956)
+.. ....+..-.|+--..+.+.+.-....+.|+||+.||..+.++|++. |.+..| .+.....+|+++ +++..
T Consensus 122 ~~~-~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 122 EFR-QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp GGB-SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred ccC-ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 000 0000111123333445555554445689999999999999999964 444322 233334589988 56888
Q ss_pred HHHHHH
Q 002172 632 IISAVL 637 (956)
Q Consensus 632 iv~ai~ 637 (956)
+...+.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777663
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00014 Score=76.11 Aligned_cols=123 Identities=14% Similarity=0.145 Sum_probs=80.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+-+++|+. . -..++.+.+... ..-.|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~--f~~~~~~~~~~~-----------------~Kp~p~ 169 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S--FDFALGEKSGIR-----------------RKPAPD 169 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T--CSEEEEECTTSC-----------------CTTSSH
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c--eeEEEecCCCCC-----------------CCCCHH
Confidence 36689999999999999999999999888888888888874 2 122222211100 001122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee---EEecccc--HHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG---IAVADAT--DAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG---Iamg~gt--d~Ak~aADivL~~~~~~~iv~ai 636 (956)
-=..+.+.+.-....|.|+||+.||..|.++|++. ++++.+. +..+..+|+++ +++..+...+
T Consensus 170 ~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 170 MTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 21334444444445699999999999999999994 4444322 33334689888 5577666544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.52 E-value=4.8e-05 Score=80.19 Aligned_cols=67 Identities=12% Similarity=0.242 Sum_probs=53.9
Q ss_pred EeeChh--hHHHHHHHHhhCCCEEEEEcCCccChhhhccC--CeeEEeccccHHHhhccceeecC-CChhHHHHHHH
Q 002172 566 AGVFPE--HKYEIVKRLQARKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARSASDIVLTE-PGLSVIISAVL 637 (956)
Q Consensus 566 ar~~Pe--~K~~iV~~lq~~g~~V~m~GDGvNDapALk~A--dVGIamg~gtd~Ak~aADivL~~-~~~~~iv~ai~ 637 (956)
-.+.|. +|..-++.|.+.-. |+++||+.||.+||+.| ++||||+++ ++.||+++.+ ++-..+..+++
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 344454 79999998887633 89999999999999999 999999987 6789998876 55666666663
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00011 Score=74.48 Aligned_cols=120 Identities=9% Similarity=0.096 Sum_probs=82.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+ ++.|++. +++.++|+.....+..+.+++|+.... ..++.+.+.. ...-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESVK-----------------EYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhcC-----------------CCCCCHH
Confidence 56789999 9999999 999999999988888888899884221 1122111100 0111244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe-c---cccHHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-g---~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
--..+.+.+. ...+.|+||+.||..|.++|+++..+ . ++.+..+..+|+++ +++..+...+
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 197 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 4455666666 45688999999999999999999776 2 22222344688887 4577776655
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00011 Score=78.76 Aligned_cols=115 Identities=14% Similarity=-0.008 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.+++.+.++.|++. |+++.++|+.....+....+.+|+.. . ..++.+.+... ..-.|
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~~-----------------~kp~~ 173 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVKQ-----------------GKPHP 173 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCSS-----------------CTTSS
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCCC-----------------CCCCh
Confidence 3578999999999999 99999999999988888888888852 1 12222221110 00123
Q ss_pred hhHHHHHHHHhh-------CCCEEEEEcCCccChhhhccCCeeEEe---ccc-cHHHhhccceeecC
Q 002172 571 EHKYEIVKRLQA-------RKHICGMTGDGVNDAPALKKADIGIAV---ADA-TDAARSASDIVLTE 626 (956)
Q Consensus 571 e~K~~iV~~lq~-------~g~~V~m~GDGvNDapALk~AdVGIam---g~g-td~Ak~aADivL~~ 626 (956)
+--..+.+.+.- ....|.++||+.||..|+++|++++++ +.+ .+..+..||+++.+
T Consensus 174 ~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 174 EPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 333455555554 445699999999999999999977665 433 33334458988743
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00013 Score=72.69 Aligned_cols=108 Identities=12% Similarity=0.008 Sum_probs=70.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|++.. .+....+++|+... -...+.+.+.. ...-.|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~--f~~~~~~~~~~-----------------~~kp~~~ 141 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY--FTEVVTSSSGF-----------------KRKPNPE 141 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG--EEEEECGGGCC-----------------CCTTSCH
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh--eeeeeeccccC-----------------CCCCCHH
Confidence 3679999999999999999999998865 45667777777421 01111111000 0011133
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccc
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD 621 (956)
--..+.+.+.-. .|.++||+.||.+|++.|++++++.+.....++..+
T Consensus 142 ~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 333444444433 688999999999999999999888655455554444
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.47 E-value=7.6e-05 Score=81.59 Aligned_cols=66 Identities=27% Similarity=0.301 Sum_probs=57.0
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeec-CCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT-EPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~-~~~~~~iv~ai~ 637 (956)
.|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++. +++-..+..+++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 788888777653 3 35899999999999999999999999999999999999998 888888888774
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.45 E-value=7.6e-05 Score=80.06 Aligned_cols=67 Identities=22% Similarity=0.251 Sum_probs=56.4
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+|+.+++-..+..+++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3677777776553 3 35899999999999999999999999999999999999998777777877774
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.44 E-value=7.3e-05 Score=80.94 Aligned_cols=66 Identities=24% Similarity=0.318 Sum_probs=56.1
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
+|..-++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 577777766553 2 35899999999999999999999999999999999999998877788888775
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.40 E-value=8.3e-05 Score=79.64 Aligned_cols=71 Identities=25% Similarity=0.298 Sum_probs=58.5
Q ss_pred eeChh--hHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 567 GVFPE--HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 567 r~~Pe--~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.+.|. .|...++.+.+. ...|.++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+..+++
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 44444 688777777653 245899999999999999999999999999888999999998888888887764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00018 Score=74.26 Aligned_cols=122 Identities=14% Similarity=0.096 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++ |+++.++|+.........-+.++- +...++.+.+. ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~----~fd~i~~~~~~-----------------~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV----EFDHIITAQDV-----------------GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS----CCSEEEEHHHH-----------------TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC----ccCEEEEcccc-----------------CCCCCCHH
Confidence 678999999999999 899999999888777666554331 11111111100 01222344
Q ss_pred hHHHHHHHHhh---CCCEEEEEcCCc-cChhhhccCCeeEEecccc-----------HHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQA---RKHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~---~g~~V~m~GDGv-NDapALk~AdVGIamg~gt-----------d~Ak~aADivL~~~~~~~iv~ai 636 (956)
-....++.+++ ....|.|+||+. ||..|.++|++++++.+.. +..+..+|+++ +++..+...+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 44455333333 345689999996 9999999999999985321 33447899998 5688877766
Q ss_pred H
Q 002172 637 L 637 (956)
Q Consensus 637 ~ 637 (956)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00026 Score=71.28 Aligned_cols=97 Identities=10% Similarity=0.035 Sum_probs=67.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+.... .... +++.-.|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f--~~~~----------------------~~~~~k~ 123 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF--VHRE----------------------IYPGSKI 123 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTE--EEEE----------------------ESSSCHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhc--ceeE----------------------EEeCchH
Confidence 678999999999999999999999998 68899999999985210 0000 0001112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Eeccc
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA 612 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~g 612 (956)
+.-..+.+.+.-....|.|+||+.||..+.++|++.. .+..|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g 166 (187)
T 2wm8_A 124 THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNG 166 (187)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSS
T ss_pred HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCC
Confidence 2223334444333456899999999999999998763 34433
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00013 Score=76.96 Aligned_cols=66 Identities=18% Similarity=0.156 Sum_probs=54.4
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhc-------cceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSA-------SDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~a-------ADivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.+. | ..|.++||+.||.+|++.|++||+|+++.+..++. ||++..+++-..+.++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 577777666543 2 35899999999999999999999999999988885 889988877777877774
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00017 Score=73.83 Aligned_cols=115 Identities=10% Similarity=0.057 Sum_probs=76.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++ |+++.++|+.....+..+-+++|+... ...++.+ .-.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~--f~~i~~~-----------------------~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHF--FDGIYGS-----------------------SPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEE-----------------------CSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhh--eeeeecC-----------------------CCCCC
Confidence 567999999999999 999999999988888888888888421 1111111 10011
Q ss_pred hHHHHH----HHHhhCCCEEEEEcCCccChhhhccCCe---eEEeccc-cHHHh-hccceeecCCChhHHHH
Q 002172 572 HKYEIV----KRLQARKHICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-SASDIVLTEPGLSVIIS 634 (956)
Q Consensus 572 ~K~~iV----~~lq~~g~~V~m~GDGvNDapALk~AdV---GIamg~g-td~Ak-~aADivL~~~~~~~iv~ 634 (956)
-|-++. +.+.-....|.|+||+.||..|.++|++ |++++.+ .+..+ ..+|+++. ++..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 222232 3333233468999999999999999998 6766644 33333 36899884 4665544
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00015 Score=77.02 Aligned_cols=124 Identities=15% Similarity=0.195 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+.... ...+-+.+|+.... ..++.+.+. ....-.|+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 165 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSEAA-----------------GWPKPDPR 165 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHHHH-----------------SSCTTSHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeeccc-----------------CCCCCCHH
Confidence 46799999999999999999999987664 57777888874211 111111000 01122344
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCeeEEeccccHH------HhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADATDA------ARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVGIamg~gtd~------Ak~aADivL~~~~~~~iv~ai~ 637 (956)
--..+.+.+.-....|.|+||+. ||..|.++|+++.++.+.... ....+|+++ +++..++..+.
T Consensus 166 ~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 166 IFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 45556666655556799999997 999999999999998632211 223689988 56888877764
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0003 Score=70.98 Aligned_cols=137 Identities=15% Similarity=0.113 Sum_probs=91.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCCh---HHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~---~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
-++.|++.++++.|++.|+++.++|+-.. ..+..+-+.+|+... ...++...+... ......
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDY--FDFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGG--EEEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhh--eEEEEEcccccc-------------ccCCCC
Confidence 36889999999999999999999998765 888888899998531 111111111000 000112
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCC-ccChhhhccCCeeEE-eccccHH------HhhccceeecCCChhHHHHHHHHH
Q 002172 568 VFPEHKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIA-VADATDA------ARSASDIVLTEPGLSVIISAVLTS 639 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDG-vNDapALk~AdVGIa-mg~gtd~------Ak~aADivL~~~~~~~iv~ai~~g 639 (956)
-.|+--..+.+.+.-....+.|+||. .+|..+-++|++... +..+... ....+|.++.+.++..+..+++..
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 23444455666665555679999999 799999999999744 4332211 112679999766899999888766
Q ss_pred HHH
Q 002172 640 RAI 642 (956)
Q Consensus 640 R~~ 642 (956)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0008 Score=70.55 Aligned_cols=117 Identities=14% Similarity=0.040 Sum_probs=80.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee--C
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV--F 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~--~ 569 (956)
++.|++.+.++.|+ .|+++.++|+.....+...-+.+|+.... .. +++.- .
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~------------------------i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF--PR------------------------IEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC--CC------------------------EEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC--ce------------------------eeeeCCCC
Confidence 56799999999999 99999999999988888888888874211 11 12211 2
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCeeEEec-cccH--------HHhhccce-eecCCChhHHHHHHH
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVA-DATD--------AARSASDI-VLTEPGLSVIISAVL 637 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVGIamg-~gtd--------~Ak~aADi-vL~~~~~~~iv~ai~ 637 (956)
|+--..+.+.+.-....|.|+||+. ||..|.+.|++++++- .|.. .....+|+ ++ +++..+...+.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 3333455555554456789999999 9999999999997763 3321 11345787 67 55777776653
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00026 Score=75.29 Aligned_cols=66 Identities=26% Similarity=0.284 Sum_probs=52.7
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.|...++.+.++ ...|.++||+.||.+|++.|++|++|+++.+..++.||+++.+.+-..+..+++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 566666555432 346889999999999999999999999988888999999987665555777764
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00066 Score=68.35 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=70.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSAL-----------------GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHHH-----------------SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 47799999999999999 99999999998888888888874211 111111000 01112234
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
--..+.+.+.-....|.|+||+.||..|.+.|++...+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 444555666544556899999999999999999987764
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00026 Score=74.96 Aligned_cols=56 Identities=23% Similarity=0.169 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhC-----CCEEEEEcCCccChhhhccCCeeEEecccc-HHHhhccceeecC
Q 002172 571 EHKYEIVKRLQAR-----KHICGMTGDGVNDAPALKKADIGIAVADAT-DAARSASDIVLTE 626 (956)
Q Consensus 571 e~K~~iV~~lq~~-----g~~V~m~GDGvNDapALk~AdVGIamg~gt-d~Ak~aADivL~~ 626 (956)
-.|..-++.+.+. ...|+++||+.||.+||+.|++||||+++. +..++.||+|+.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 3577766666543 357999999999999999999999999888 6677788887643
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00022 Score=72.44 Aligned_cols=101 Identities=6% Similarity=-0.008 Sum_probs=67.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH------hCCCCCCCCCccccCCccccccCcccHHHHhhhcceE
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR------LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~------lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf 565 (956)
++.|++.+.++.|++ |+++.++|+........+.+. .|+... -..++.+.+ . ..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~--f~~~~~~~~------------~-----~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF--FDKVYASCQ------------M-----GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG--SSEEEEHHH------------H-----TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH--cCeEEeecc------------c-----CC
Confidence 467999999999999 999999999888777666655 454211 011111000 0 01
Q ss_pred EeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccc
Q 002172 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA 612 (956)
Q Consensus 566 ar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~g 612 (956)
..-.|+--..+.+.+.-....|.|+||+.||..|.+.|+++..+.++
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 11123334455566554456789999999999999999999988743
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0025 Score=67.70 Aligned_cols=123 Identities=11% Similarity=0.115 Sum_probs=82.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++ |+++.++|+.....+..+-+.+|+..- ...++.+.+.. ...-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY--FDAIVIGGEQK-----------------EEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGSS-----------------SCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhh--hheEEecCCCC-----------------CCCCCHH
Confidence 678999999999997 699999999999888888899998531 11222211110 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcC-CccChhhhccCCe--eEEeccccH---HHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGD-GVNDAPALKKADI--GIAVADATD---AARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GD-GvNDapALk~AdV--GIamg~gtd---~Ak~aADivL~~~~~~~iv~ai 636 (956)
--..+.+.+.-....+.|+|| ..||..+-++|++ .|.+..+.. .....+|+++ +++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 334455555544557899999 5999999999999 577763321 1234588887 4577776655
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0036 Score=63.75 Aligned_cols=96 Identities=18% Similarity=0.127 Sum_probs=68.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+.....+...-+.+|+..- ...++.+.+.. ...-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~--fd~~~~~~~~~-----------------~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKY--FDVMVFGDQVK-----------------NGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECGGGSS-----------------SCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcc--ccccccccccC-----------------CCcccHH
Confidence 4578999999999999999999999999999999999998532 11122111110 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
-=....+.+.-....|.|+||..+|..+-++|++.
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~ 179 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIE 179 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCC
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCc
Confidence 33445555555556789999999999999999985
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00085 Score=69.25 Aligned_cols=134 Identities=19% Similarity=0.069 Sum_probs=75.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccCCccccccCcccH
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 555 (956)
.++.|++.+++++|++.|+++.++|+... ..+..+.+++|+.-+ .........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD---MVLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee---eEEEeecCCCCcee----
Confidence 47889999999999999999999999887 677778888887311 00000000000000
Q ss_pred HHHhhhcce-EEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE--Eecccc---HHHhhccceeecCCCh
Q 002172 556 DELIEKADG-FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI--AVADAT---DAARSASDIVLTEPGL 629 (956)
Q Consensus 556 ~~~~~~~~v-far~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI--amg~gt---d~Ak~aADivL~~~~~ 629 (956)
+.. ..+ +..-.|+-=..+.+.+.-....+.|+||+.||..+.++|++.. .+..|. +.....+|+++ +++
T Consensus 128 -~~~--~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i--~~l 202 (218)
T 2o2x_A 128 -LAI--PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDS--SEL 202 (218)
T ss_dssp -TCC--SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSH--HHH
T ss_pred -ecc--cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEec--ccH
Confidence 000 000 0000121112334444333456899999999999999999764 333321 11223456655 346
Q ss_pred hHHHHHH
Q 002172 630 SVIISAV 636 (956)
Q Consensus 630 ~~iv~ai 636 (956)
..+...+
T Consensus 203 ~el~~~l 209 (218)
T 2o2x_A 203 GDLLAAI 209 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0045 Score=62.89 Aligned_cols=119 Identities=10% Similarity=0.047 Sum_probs=74.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++||.....+..+.+ . +...++.+.+.. ...-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 578999999999999999999999998877744432 1 111122221110 0111233
Q ss_pred hHHHHHHHHhhCC-CEEEEEcCCccChhhhccCCe-eEEeccccH---------------------------HHhhccce
Q 002172 572 HKYEIVKRLQARK-HICGMTGDGVNDAPALKKADI-GIAVADATD---------------------------AARSASDI 622 (956)
Q Consensus 572 ~K~~iV~~lq~~g-~~V~m~GDGvNDapALk~AdV-GIamg~gtd---------------------------~Ak~aADi 622 (956)
-=....+.+.-.. ..+.|+||..+|..+-++|++ .|++..|.. .....+|+
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~ 171 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHS 171 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCE
Confidence 2233444444322 468899999999999999997 455643210 11235898
Q ss_pred eecCCChhHHHHHH
Q 002172 623 VLTEPGLSVIISAV 636 (956)
Q Consensus 623 vL~~~~~~~iv~ai 636 (956)
++ +++..+...+
T Consensus 172 vi--~~~~eL~~~l 183 (196)
T 2oda_A 172 VI--DHLGELESCL 183 (196)
T ss_dssp EE--SSGGGHHHHH
T ss_pred Ee--CCHHHHHHHH
Confidence 88 5688877665
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.00024 Score=71.80 Aligned_cols=101 Identities=9% Similarity=0.048 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.|++.+.++.|++.|+++.++|+........+.+. +|+... -..++.+. +. ....-.|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~--f~~~~~~~------------~~-----~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQ------------DL-----GMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEEHH------------HH-----TCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh--eeeEEEec------------cc-----CCCCCCH
Confidence 5679999999999999999999998654332221111 222100 00000000 00 0011123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEecc
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (956)
+--..+.+.+.-....+.|+||+.||..|.+.|++...+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 192 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 192 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEec
Confidence 34445566665555678999999999999999999877753
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0013 Score=61.68 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=64.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+. ....-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~-----------------~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGV--VDKVLLSGEL-----------------GVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTS--SSEEEEHHHH-----------------SCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhh--ccEEEEeccC-----------------CCCCCCHH
Confidence 4678999999999999999999999988877777788877421 1111111000 01111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
--..+.+.+.-....+.|+||+.+|..+.++|++-
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 33444555544445688999999999999999874
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0037 Score=64.02 Aligned_cols=118 Identities=20% Similarity=0.206 Sum_probs=74.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++. +++.++|+.... -+.+|+... ...++.+. +. ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~--f~~~~~~~------------~~-----~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY--FAFALCAE------------DL-----GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG--CSEEEEHH------------HH-----TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH--eeeeEEcc------------cc-----CCCCcCHH
Confidence 5778999999999998 999999987654 133444211 00111000 00 00111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCeeEEe-c---cccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVGIam-g---~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
--..+.+.+.-....|.|+||+. ||..|.++|+++.++ . ...+. +..+|+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 33455555554456789999998 999999999999876 2 22222 56789998 56888877663
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0019 Score=68.77 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=47.4
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcC----CccChhhhccCC-eeEEeccccHHHhhccceeecCCC
Q 002172 571 EHKYEIVKRL-QARKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEPG 628 (956)
Q Consensus 571 e~K~~iV~~l-q~~g~~V~m~GD----GvNDapALk~Ad-VGIamg~gtd~Ak~aADivL~~~~ 628 (956)
-.|..-++.| .-...-|+++|| |.||.+||+.|+ +|++|+++.+..|+.||+|..+++
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 3577777777 112357999999 999999999999 699999999999999999876543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0032 Score=70.85 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC-CccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP-SSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.||+.++++.|+++|+++.++|+.....+..+-+++|+... .. ..++.+.+... ..+......-...-.|
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~-Fd~~~Ivs~ddv~~------~~~~~~~~kp~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY-FEADFIATASDVLE------AENMYPQARPLGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG-SCGGGEECHHHHHH------HHHHSTTSCCCCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh-cCCCEEEecccccc------cccccccccCCCCCCH
Confidence 6789999999999999999999999999888888889998532 11 02222211100 0000000000001112
Q ss_pred hhHHHHHHHHh--------------hCCCEEEEEcCCccChhhhccCCee-EEecccc-------HHHhhccceeecCCC
Q 002172 571 EHKYEIVKRLQ--------------ARKHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAARSASDIVLTEPG 628 (956)
Q Consensus 571 e~K~~iV~~lq--------------~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gt-------d~Ak~aADivL~~~~ 628 (956)
+-=....+.+. -....|.|+||+.+|..|-++|++. |++..|. +.....+|+++ ++
T Consensus 288 ~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~s 365 (384)
T 1qyi_A 288 FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NH 365 (384)
T ss_dssp HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SS
T ss_pred HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CC
Confidence 11111222221 1235689999999999999999976 4454331 22234689998 55
Q ss_pred hhHHHHHH
Q 002172 629 LSVIISAV 636 (956)
Q Consensus 629 ~~~iv~ai 636 (956)
+..+...+
T Consensus 366 l~eL~~~l 373 (384)
T 1qyi_A 366 LGELRGVL 373 (384)
T ss_dssp GGGHHHHH
T ss_pred HHHHHHHH
Confidence 77777655
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.049 Score=53.65 Aligned_cols=131 Identities=12% Similarity=0.120 Sum_probs=76.2
Q ss_pred eeeCceeEEeeeeeeccC--CCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHH--hhccceeEeecCCCCCcceEE
Q 002172 338 LTLNKLSVDKNLIEIFAK--GVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEA--RANIQEVHFLPFNPTDKRTAL 413 (956)
Q Consensus 338 LT~n~m~v~~~~i~~~~~--~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~--~~~~~~l~~~pF~s~~kr~sv 413 (956)
||+|+++|.++. .+.. +.+.++++.+++..+.. +.||+..||+.++...... ....+..+.+| .+ -...
T Consensus 1 LT~G~p~V~~v~--~~~~~~~~~~~~lL~laaslE~~-SeHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G~-Gv~a 73 (165)
T 2arf_A 1 AGHMVPRVMRVL--LLGDVATLPLRKVLAVVGTAEAS-SEHPLGVAVTKYCKEELGTETLGYCTDFQAVP---GC-GIGC 73 (165)
T ss_dssp CCCCCCCEEEEE--ECCCTTTSCHHHHHHHHHHHHTT-SCSTTHHHHHHHHHHHHTCCCCCCEEEEEEET---TT-EEEE
T ss_pred CCCceeEEEEEE--eeCCcCCCCHHHHHHHHHHHHcc-CCChHHHHHHHHHHHhcCCCCCCCcCceEEec---Cc-cEEE
Confidence 799999998754 2221 24677888887776544 4579999999876321000 00112222222 11 1122
Q ss_pred EEEcC------------------------------CCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEE
Q 002172 414 TYIDS------------------------------EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLA 463 (956)
Q Consensus 414 ~~~~~------------------------------~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~Rvla 463 (956)
.+... ..+.+.+.-|+++.+.+..-. +...+.+.+..+..+|..++.
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLT---ISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCS---SCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCC---CCHHHHHHHHHHHhCCCeEEE
Confidence 22111 112345667999987553211 112234455677889999999
Q ss_pred EEEeecCCCCccCCCCCceEEEEeccCC
Q 002172 464 VAYQEVPDGRKESSGGPWQFIGLMPLFD 491 (956)
Q Consensus 464 vA~~~l~~~~~~~~e~~l~~lGli~~~D 491 (956)
+|... +++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99765 8999999987
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0022 Score=66.14 Aligned_cols=103 Identities=10% Similarity=-0.010 Sum_probs=68.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH------hCCCCCCCCCccccCCccccccCcccHHHHhhhcceE
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR------LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~------lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf 565 (956)
++.|++.++++.|++. +++.++|+.....+..+.+. .|+... ...++.+. +. ..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~--fd~i~~~~------------~~-----~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY--FEKTYLSY------------EM-----KM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH--CSEEEEHH------------HH-----TC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh--CCEEEeec------------cc-----CC
Confidence 4679999999999998 99999999998887766543 333110 00000000 00 01
Q ss_pred EeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccH
Q 002172 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 614 (956)
Q Consensus 566 ar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd 614 (956)
..-.|+-=..+.+.+.-....|.|+||+.||..|.++|+++..+.++.+
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 1222344455666665555679999999999999999999988874433
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.00 E-value=0.002 Score=67.81 Aligned_cols=52 Identities=19% Similarity=0.243 Sum_probs=41.6
Q ss_pred hHHHHHHHH-hhCCCEEEEEcC----CccChhhhccCCe-eEEeccccHHHhhcccee
Q 002172 572 HKYEIVKRL-QARKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARSASDIV 623 (956)
Q Consensus 572 ~K~~iV~~l-q~~g~~V~m~GD----GvNDapALk~AdV-GIamg~gtd~Ak~aADiv 623 (956)
+|..-++.| .-...-|+++|| |.||.+||+.|+. |++|+++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 566666666 112457999999 9999999999987 999999999999999987
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.01 Score=62.75 Aligned_cols=43 Identities=19% Similarity=0.308 Sum_probs=34.4
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCC
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (956)
.+.+-|+++++|+++++.|++++++|| ..........+.+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 444567899999999999999999999 5566555666777874
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.009 Score=63.29 Aligned_cols=84 Identities=15% Similarity=0.068 Sum_probs=63.0
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
.++.|++.+.++.|++.|+++.++||-.. +.+..--+++||..-. .. .++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~-~~------------------------~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN-DK------------------------TLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS-TT------------------------TEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc-cc------------------------eeEe
Confidence 57889999999999999999999998854 4666667788996310 00 1222
Q ss_pred eeChhhHHHHHHHHhhCC-CEEEEEcCCccChhh
Q 002172 567 GVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPA 599 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g-~~V~m~GDGvNDapA 599 (956)
|-...+|....+.+++.| .+|+++||-.+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 222356888888888754 479999999999987
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.012 Score=61.71 Aligned_cols=116 Identities=11% Similarity=0.093 Sum_probs=76.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.+.|+-.. +..+-+.+|+..- ...++.+.+.. ...-.|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~--Fd~i~~~~~~~-----------------~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDK--FDFIADAGKCK-----------------NNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGG--CSEECCGGGCC-----------------SCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccch--hhhHhhhcccccc--cceeecccccC-----------------CCCCcHH
Confidence 5789999999999999999988776543 4566778898532 12222221111 1111244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEeccccHHHhhccceeecCCChhHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVI 632 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~aADivL~~~~~~~i 632 (956)
-=..+.+.+.-....|.|+||..+|..|-++|++ .|++++..+. ..||+++ +++..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi--~~l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVV--DSTNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEE--SSGGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEE--CChHhC
Confidence 4445566665555678999999999999999998 5667654433 3589998 456554
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.014 Score=59.82 Aligned_cols=118 Identities=9% Similarity=-0.010 Sum_probs=69.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+.... +..+.+.+|+... -..++.+.+.. ...-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~~~--f~~~~~~~~~~-----------------~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLKKY--FDALALSYEIK-----------------AVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCGGG--CSEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcHhH--eeEEEeccccC-----------------CCCCCHH
Confidence 46799999999999999999999988664 6778888887421 11111111100 1111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcc-ChhhhccCCeeEE-eccccHHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVN-DAPALKKADIGIA-VADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvN-DapALk~AdVGIa-mg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
--..+.+.+.-. . .|+||+.+ |..+-++|++... +..+... .+. |.++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~-~~~i--~~l~el~~~l 214 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV-RDRV--KNLREALQKI 214 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC-CSCB--SSHHHHHHHH
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc-ceEE--CCHHHHHHHH
Confidence 223344444322 2 89999999 9999999998755 3332111 111 3343 4566666554
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.66 E-value=0.027 Score=59.43 Aligned_cols=41 Identities=12% Similarity=0.119 Sum_probs=33.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCC
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (956)
.+-++++++|++++++|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3446899999999999999999998 5566666667778874
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.36 E-value=0.015 Score=61.65 Aligned_cols=84 Identities=14% Similarity=0.059 Sum_probs=61.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
+++.|++.+.++.|++.|+++.++||-.. ..+..--+++|+..- ... .++-
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~--~~~-----------------------~Lil 154 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGV--EES-----------------------AFYL 154 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCC--SGG-----------------------GEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcc--ccc-----------------------ceec
Confidence 57889999999999999999999998754 466666778898631 000 1122
Q ss_pred eeChhhHHHHHHHHhhCC-CEEEEEcCCccChhh
Q 002172 567 GVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPA 599 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g-~~V~m~GDGvNDapA 599 (956)
|-.-..|....+.+.+.| .+|+++||-.+|.++
T Consensus 155 r~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 155 KKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 212245777777777774 479999999999886
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.023 Score=58.67 Aligned_cols=113 Identities=10% Similarity=0.095 Sum_probs=71.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.| ++.++|+-....+..+.+++|+.... .. .+... .
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f-~~------------------------~~~~~---~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV-EG------------------------RVLIY---I 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT-TT------------------------CEEEE---S
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc-Ce------------------------eEEec---C
Confidence 68899999999999999 99999999888888888888874210 00 00111 1
Q ss_pred hHHHHHHHHh--hCCCEEEEEcCCcc---ChhhhccCCee-EEeccc----c-HHHhh--ccceeecCCChhHHHHH
Q 002172 572 HKYEIVKRLQ--ARKHICGMTGDGVN---DAPALKKADIG-IAVADA----T-DAARS--ASDIVLTEPGLSVIISA 635 (956)
Q Consensus 572 ~K~~iV~~lq--~~g~~V~m~GDGvN---DapALk~AdVG-Iamg~g----t-d~Ak~--aADivL~~~~~~~iv~a 635 (956)
.|..+.+.+. -....|.|+||+.| |..+-++|++- |.+..| . +..++ .+|+++ +++..+...
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~ 221 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEM 221 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGC
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHH
Confidence 2222233222 23467999999999 65566677754 334333 2 22233 289888 446655443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.0042 Score=61.90 Aligned_cols=104 Identities=10% Similarity=0.058 Sum_probs=62.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccH
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 555 (956)
-++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+. .......+......
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~------ 111 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADE------ 111 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGC------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCccc------
Confidence 357899999999999999999999997 456777788888884 11111111000000
Q ss_pred HHHhhhcceEEeeChhh--HHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccc
Q 002172 556 DELIEKADGFAGVFPEH--KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA 612 (956)
Q Consensus 556 ~~~~~~~~vfar~~Pe~--K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g 612 (956)
.....|.- =..+.+.+.-....|.|+||..+|..+-++|++- |.+..+
T Consensus 112 ---------~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 112 ---------CDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp ---------CSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ---------ccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 00001110 0111222222234588999999999999999986 455544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.51 E-value=0.025 Score=61.11 Aligned_cols=103 Identities=14% Similarity=0.027 Sum_probs=70.3
Q ss_pred ccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHH---HHHHHH--------hCCCCCCCCCccccCCccccccCcccHH
Q 002172 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA---KETGRR--------LGMGTNMYPSSALLGQNKDESIVALPVD 556 (956)
Q Consensus 488 ~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA---~~ia~~--------lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 556 (956)
..+++|.|++.++++.|++.|+++.++||-....+ ...-+. .|+. + ..++.+.+.+
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~~--------- 250 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---L-VMQCQREQGD--------- 250 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---C-SEEEECCTTC---------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---c-hheeeccCCC---------
Confidence 34678999999999999999999999999875432 222233 6772 1 1122111100
Q ss_pred HHhhhcceEEeeChhhHHHHHHHHhhCC-CEEEEEcCCccChhhhccCCee-EEeccc
Q 002172 557 ELIEKADGFAGVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIG-IAVADA 612 (956)
Q Consensus 557 ~~~~~~~vfar~~Pe~K~~iV~~lq~~g-~~V~m~GDGvNDapALk~AdVG-Iamg~g 612 (956)
.+-.|+-|..+.+.+.... ..+.|+||..+|+.|-++|++- |++..|
T Consensus 251 ---------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 251 ---------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp ---------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred ---------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 1223788888888885544 3468999999999999999885 444433
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.1 Score=54.93 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=36.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (956)
+++-+++.++|++|++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5567899999999999999999999 88877777777888874
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.08 E-value=0.26 Score=51.21 Aligned_cols=40 Identities=23% Similarity=0.209 Sum_probs=34.6
Q ss_pred CCccHHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 002172 493 PRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (956)
+-+++.++++.+++.|+++..+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 56789999999999999999999 88888777777787774
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.19 E-value=0.081 Score=56.07 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=33.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHhCCC
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 532 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~ 532 (956)
.++-|++.++++.|++.|+++.++||-. .......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4677999999999999999999999987 33444445677885
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=93.05 E-value=0.02 Score=60.25 Aligned_cols=51 Identities=22% Similarity=0.205 Sum_probs=42.5
Q ss_pred hHHHHHHHHhhCCCEEEEEcC----CccChhhhccCC-eeEEeccccHHHhhccce
Q 002172 572 HKYEIVKRLQARKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDI 622 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GD----GvNDapALk~Ad-VGIamg~gtd~Ak~aADi 622 (956)
+|..-++.|.+...-|.++|| |.||.+||+.|. +|++|+++.|..+..+++
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKI 242 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHH
Confidence 677777777665568999999 799999999996 899999999988866554
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.81 E-value=0.015 Score=59.98 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=30.7
Q ss_pred CCEEEEEcCC-ccChhhhccCCeeEEe---cccc-HHHh---hccceeec
Q 002172 584 KHICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---SASDIVLT 625 (956)
Q Consensus 584 g~~V~m~GDG-vNDapALk~AdVGIam---g~gt-d~Ak---~aADivL~ 625 (956)
...|.|+||+ .||..|++.|++++++ |.+. +..+ ..+|+++.
T Consensus 193 ~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 193 SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 3568999999 6999999999998554 4332 3333 36888884
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=92.46 E-value=0.097 Score=57.47 Aligned_cols=120 Identities=13% Similarity=0.076 Sum_probs=71.6
Q ss_pred cCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccc----cCcccHHHHhh----
Q 002172 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDES----IVALPVDELIE---- 560 (956)
Q Consensus 489 ~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~----~~~~~~~~~~~---- 560 (956)
....+.|+..+.++.++++|++|+++||-.....+.+|..++...+. +...+.|...... ........-+.
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygI-p~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNA-KPENVIGVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCC-CGGGEEEECEEEECTTTCCEECHHHHHHTTCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCC-CHHHeEeeeeeeeccccccccccccccccccc
Confidence 33457899999999999999999999999999999999986332211 1112222111000 00000000000
Q ss_pred ------hcceEEe-----eChhhHHHHHHHHhhCC-CEEEEEcCCc-cChhhhcc--CCeeEEe
Q 002172 561 ------KADGFAG-----VFPEHKYEIVKRLQARK-HICGMTGDGV-NDAPALKK--ADIGIAV 609 (956)
Q Consensus 561 ------~~~vfar-----~~Pe~K~~iV~~lq~~g-~~V~m~GDGv-NDapALk~--AdVGIam 609 (956)
+...-.+ +.-+.|..-|+...+.| ..+++.||+. .|.+||.. ++.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0001111 22367888887765443 5789999995 79999954 5555554
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.21 E-value=0.089 Score=55.66 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=71.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh---CCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL---GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l---Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
-++.|++.++++.|++.|+++.++|.-....+..+-+.+ |+..- -..++.+ + +-..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~--fd~i~~~-~------------------~~~K 187 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--VDGHFDT-K------------------IGHK 187 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG--CSEEECG-G------------------GCCT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh--ccEEEec-C------------------CCCC
Confidence 368899999999999999999999999888777665543 34311 1111111 0 0011
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEec-ccc---HHHhhccceee
Q 002172 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA-DAT---DAARSASDIVL 624 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg-~gt---d~Ak~aADivL 624 (956)
-.|+-=..+.+.+.-....|.|+||..+|..+-++|++- |.+. .+. +.....+|.++
T Consensus 188 P~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i 249 (261)
T 1yns_A 188 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249 (261)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred CCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEE
Confidence 112322445566655556799999999999999999975 4443 221 11223467776
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=91.36 E-value=0.21 Score=52.52 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=34.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 002172 492 PPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (956)
++ |+++++|++++++|++++++| |..........+++|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 45 899999999999999999999 77777777777888874
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.62 E-value=0.083 Score=54.08 Aligned_cols=90 Identities=20% Similarity=0.204 Sum_probs=55.2
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHH----HHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKE----TGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~----ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
+.+++.+.++.|++.|+++.++|+-....+.. +.+..+... .+... ..+.+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 57899999999999999999999986432222 332222210 00000 001111
Q ss_pred --ChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEec
Q 002172 569 --FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA 610 (956)
Q Consensus 569 --~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg 610 (956)
.|+-..++ +++.|. +.|+||..+|..+-++|++- |.+.
T Consensus 145 KP~p~~~~~~---~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 145 KPGQNTKSQW---LQDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CTTCCCSHHH---HHHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHH---HHHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 23333333 344444 99999999999999999985 4454
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.16 E-value=0.24 Score=51.39 Aligned_cols=108 Identities=9% Similarity=0.016 Sum_probs=69.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|.... +..+-+.+|+... ...++.+.+.. ...-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~--fd~i~~~~~~~-----------------~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF--FTFCADASQLK-----------------NSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG--CSEECCGGGCS-----------------SCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc--ccccccccccc-----------------CCCCcHH
Confidence 5789999999999999999999997654 3445677887532 12222221111 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccccHHHhhccceee
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVL 624 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd~Ak~aADivL 624 (956)
-=....+.+.-....|.|+||..+|..|-++|++- |++..|. ..+|.++
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~ 203 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLL 203 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEE
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhc
Confidence 32344555555556799999999999999999874 5565442 2456655
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=86.68 E-value=0.54 Score=54.11 Aligned_cols=98 Identities=6% Similarity=-0.076 Sum_probs=60.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC------ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceE
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGD------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf 565 (956)
++.|++.++++.|++.|+++.++|+- ......... .|+.. +...++.+.+.. .
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~--~fd~i~~~~~~~-----------------~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKM--HFDFLIESCQVG-----------------M 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHT--TSSEEEEHHHHT-----------------C
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhh--heeEEEeccccC-----------------C
Confidence 67899999999999999999999985 222221111 13321 111122211110 1
Q ss_pred EeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002172 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 566 ar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
..-.|+-=..+.+.+.-....|.|+||..||..+-++|++....-
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 111233444555666555567899999999999999998876543
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=86.19 E-value=2.1 Score=44.02 Aligned_cols=50 Identities=12% Similarity=0.160 Sum_probs=35.1
Q ss_pred CEEEEEcCCc-cChhhhccCCeeE-Eeccc---c-HHH--hhccceeecCCChhHHHHHH
Q 002172 585 HICGMTGDGV-NDAPALKKADIGI-AVADA---T-DAA--RSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 585 ~~V~m~GDGv-NDapALk~AdVGI-amg~g---t-d~A--k~aADivL~~~~~~~iv~ai 636 (956)
..|.|+||+. ||..|.+.|++-. .+..| . +.. ...+|+++ +++..+...+
T Consensus 197 ~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l 254 (259)
T 2ho4_A 197 EEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTC--ESFPHAVDHI 254 (259)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEE--SCHHHHHHHH
T ss_pred HHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEE--CCHHHHHHHH
Confidence 4689999998 9999999999753 34433 1 111 24578887 6688777655
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=85.96 E-value=0.061 Score=53.88 Aligned_cols=41 Identities=17% Similarity=0.196 Sum_probs=33.9
Q ss_pred CCCCccHHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCC
Q 002172 491 DPPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGM 531 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~a-GI~v~miTGD~~~tA~~ia~~lGi 531 (956)
-++.|++.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999877666666666554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=85.56 E-value=1.2 Score=47.70 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=33.9
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 532 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miT---GD~~~tA~~ia~~lGi~ 532 (956)
.+++-+++.+++++|++.|++++++| |.........-+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34566789999999999999999999 46666555555677774
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=81.48 E-value=61 Score=40.73 Aligned_cols=58 Identities=12% Similarity=0.027 Sum_probs=33.1
Q ss_pred cccChhHHHHHHHHHHHHHHHHHH-HhccccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 002172 787 FVDRPGLLLVLAFAVAQLIATLIA-VYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDF 844 (956)
Q Consensus 787 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (956)
|..+.-++.++..++.+++..+++ ...-+++.++++..|.+.+.+.+..+++.-+.-.
T Consensus 929 ~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~ 987 (995)
T 3ar4_A 929 WVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKF 987 (995)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555444444444444332 3444677788888898877766666665544443
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=80.57 E-value=1 Score=51.03 Aligned_cols=40 Identities=10% Similarity=0.136 Sum_probs=33.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCC------------hHHHHHHHHHhCCC
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQ------------LAIAKETGRRLGMG 532 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~------------~~tA~~ia~~lGi~ 532 (956)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999954 22367777888874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 956 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 7e-30 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-25 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 0.004 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-14 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 7e-10 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 2e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 8e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-05 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 4e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 3e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 4e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 5e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.002 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 114 bits (285), Expect = 7e-30
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM-GTNMYPSSA 540
DPPR + +I+ + G+ V MITGD A RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
+ + + E +A FA V P HK +IV+ LQ+ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 114 bits (287), Expect = 5e-28
Identities = 28/346 (8%), Positives = 85/346 (24%), Gaps = 37/346 (10%)
Query: 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV-----DKNLIEIFAKGVDAD-------A 361
+ + + + + + + + DK L ++ + G++++
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 362 VVLMAARASRVENQD--AIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSE 419
+ + ++ + + A + + N+ + L + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 420 GKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVP--DGRKESS 477
+ + A ++ ++ + A+ + + + + + +
Sbjct: 146 NIYAALEEFATTELHVSDATLFSLKGA----LWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 478 GGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM------ 531
+I + P + + G + + TG LG+
Sbjct: 202 TFKTGYIYQEIIL-RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 532 --GTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589
+ P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 590 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 627
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 107 bits (268), Expect = 5e-25
Identities = 47/328 (14%), Positives = 100/328 (30%), Gaps = 93/328 (28%)
Query: 20 NVPMEEVFETLRCNKE-GLSTEAAEERLTIFGYNKL-EEKQESKILKFLGFMWNPLSWVM 77
+ EE ++ GL+ + + L +G+N+L E+ +S + + L ++
Sbjct: 6 SKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 78 EAAAIMAIAL---ANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAP 134
AA ++ L G + + I+ +L+ N+ + +E NA NA AL
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA 125
Query: 135 KSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTK 194
++ + P +L E GE L
Sbjct: 126 ATEQDKT-------------------------PLQQKLDE-----------FGEQL---- 145
Query: 195 GPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFCICS 254
++ +++ G V +
Sbjct: 146 --------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK--------- 182
Query: 255 IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314
IAV + V IP +P V++ +A+G+ R++ + AI
Sbjct: 183 IAVALAV-------------------------AAIPEGLPAVITTCLALGTRRMAKKNAI 217
Query: 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNK 342
+ + ++E + + ++
Sbjct: 218 VRSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 38.1 bits (88), Expect = 0.004
Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 30/255 (11%)
Query: 630 SVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLLALIWKFDFPPFMVLIIAILND 688
+ S RAI+ MK + Y +S + +V F+ AL P +L + ++ D
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 278
Query: 689 GTI-MTISKDRV-------KPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFF--WAAYQT 738
G + + P + +F + +GGY+ TV W Y
Sbjct: 279 GLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAE 338
Query: 739 DFFPRTFGVSSLHEKDIDDWKKL------------ASAIYLQVSTISQAL-IFVTRARSW 785
D T+ + + +D + L V + + + +
Sbjct: 339 DGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQ 398
Query: 786 SFVDRPGL---LLVLAFAVAQLIATLIAVYANW--SFAAIEGVGWGWAGVVWLYNLIFYI 840
S + P L+ + ++ + LI +Y + ++ + +V +L
Sbjct: 399 SLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLKALDLTQWLMVLKISLPVIG 457
Query: 841 PLDFIKFFIRYALSG 855
+ +KF R L G
Sbjct: 458 LDEILKFIARNYLEG 472
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.8 bits (209), Expect = 6e-20
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 31/155 (20%)
Query: 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 541
D + + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 542 LGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
P K E VK+LQA+ + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 99
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 79.4 bits (195), Expect = 2e-18
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 137 KVLRDGKWMEE--DAAILVPGDIISVKLGDIIPADARLLEGDP--LKIDQSALTGESLPV 192
KV R + + A +VPGDI+ V +GD +PAD R+L L++DQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 193 TKGPGDS-------------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
K ++SG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 70.6 bits (172), Expect = 3e-14
Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 27/148 (18%)
Query: 376 DAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKR--TALTYIDSEGKMHRVSKGA 429
DA ++A++ + ++ R +V + FN T+K + D+ V KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 430 PEQILNL----------VRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGG 479
PE+IL+ + E++ + G R L +P G+
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 480 P-----------WQFIGLMPLFDPPRHD 496
F+GLM + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.1 bits (142), Expect = 4e-10
Identities = 28/201 (13%), Positives = 63/201 (31%), Gaps = 37/201 (18%)
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQ 375
+ + E+A + LC+D + + + A+ + + + +
Sbjct: 45 GQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALTTLVEKMNVFNTE 98
Query: 376 DAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHR-----VSKGAP 430
+ + A R +++ L F+ K ++ ++ KGAP
Sbjct: 99 VRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAP 158
Query: 431 EQILNLVRN--------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKES 476
E +++ K +I + LR LA+A ++ P R+E
Sbjct: 159 EGVIDRCNYVRVGTTRVPMTGPVKEKILSVIK--EWGTGRDTLRCLALATRDTPPKREEM 216
Query: 477 SGGPWQ----------FIGLM 487
F+G++
Sbjct: 217 VLDDSSRFMEYETDLTFVGVV 237
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 58.1 bits (139), Expect = 7e-10
Identities = 21/157 (13%), Positives = 42/157 (26%), Gaps = 6/157 (3%)
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIV 551
R E + + +I+G + +Y + A +
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 552 ALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611
+ K ++ L M GD V D A K +D+ A
Sbjct: 135 PHSCKGT------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 49.7 bits (118), Expect = 2e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 5e-07
Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 13/151 (8%)
Query: 480 PWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 539
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 540 ALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHI--CGMTGDGVNDA 597
L E + K +++K L+ + H M GDG D
Sbjct: 130 RLKFYFNGE---------YAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 598 PALKKADIGIAVA--DATDAARSASDIVLTE 626
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.3 bits (111), Expect = 2e-06
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 629 LSVIISAV 636
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.6 bits (107), Expect = 8e-06
Identities = 11/58 (18%), Positives = 18/58 (31%)
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ K + V ++ + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 13/50 (26%), Positives = 18/50 (36%)
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
+ GD ND P + A+ATD ++ SD V I
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 44.4 bits (103), Expect = 2e-05
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 625 TEPGLSVIISAV 636
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 44.2 bits (103), Expect = 4e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.1 bits (95), Expect = 4e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIV 623
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 4e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 643
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 40.7 bits (94), Expect = 5e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 572 HKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
K + + + I GDG ND L+ A IG+A+ A + ++A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.002
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Query: 540 ALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPA 599
L + KD V +E ++ + ++ I GD ND
Sbjct: 163 ILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVF-GDNENDLFM 221
Query: 600 LKKADIGIAVADATDAARSASDIV 623
++A + +A+ +A + + ASDIV
Sbjct: 222 FEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.8 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.55 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.15 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.07 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.0 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.0 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.82 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.74 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.72 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.71 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.68 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.56 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.5 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.46 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.26 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.23 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.02 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.81 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.59 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.49 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.41 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.31 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.29 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.13 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.79 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.35 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.29 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.01 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.8 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.75 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.69 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.47 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.97 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.81 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.69 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 94.5 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.09 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 92.96 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.43 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.4 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 92.39 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 91.12 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 90.68 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 89.95 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 89.43 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 88.22 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 86.67 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 85.0 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 83.36 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 82.7 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.6e-39 Score=378.34 Aligned_cols=231 Identities=19% Similarity=0.227 Sum_probs=181.9
Q ss_pred ccccCCHHHHHHHcCCCC-CCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC---
Q 002172 17 DLENVPMEEVFETLRCNK-EGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG--- 91 (956)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~-~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~--- 91 (956)
|||+.+.||++++|+++. +|||++||++|+++||+|++++++ .+.|..|+++|++|+.++|+++++++++++...
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 689999999999999995 699999999999999999998866 778889999999999999999999999987532
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceE
Q 002172 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (956)
Q Consensus 92 ~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ 171 (956)
....+|.++++|++++++|+.++++||+|++++++++++..+++ ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 22347999999999999999999999999999999998876654 35788999887
Q ss_pred EeecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcccccchHHHHHHHHHHHH
Q 002172 172 LLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIGNFC 251 (956)
Q Consensus 172 ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~~~~ 251 (956)
+.+ +||+.+. +.++|..+|..|.+|++...+...
T Consensus 138 l~~-----------~g~~i~~------------------~~~~~~~~~~~~~~~~~~~~~~~~----------------- 171 (472)
T d1wpga4 138 LDE-----------FGEQLSK------------------VISLICVAVWLINIGHFNDPVHGG----------------- 171 (472)
T ss_dssp HHH-----------HHHHHHH------------------HHHHHHHHHHHHCCTTSSSCCSSS-----------------
T ss_pred HHH-----------HHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHhhh-----------------
Confidence 643 2222210 011111222222222222111111
Q ss_pred HHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEe
Q 002172 252 ICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLC 331 (956)
Q Consensus 252 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~ 331 (956)
.....+.+.+..+++++++++|++||+++++++++|++||+|+|++||+++++|++|+..+.|
T Consensus 172 -----------------~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 172 -----------------SWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp -----------------CSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 011234455667788899999999999999999999999999999999999999999999999
Q ss_pred eccc
Q 002172 332 SDKT 335 (956)
Q Consensus 332 ~DKT 335 (956)
+|||
T Consensus 235 ~~k~ 238 (472)
T d1wpga4 235 MKQF 238 (472)
T ss_dssp HHHH
T ss_pred hHHh
Confidence 9998
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.1e-35 Score=293.99 Aligned_cols=148 Identities=41% Similarity=0.566 Sum_probs=134.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccCCccccccCcccHHHHhhhcceEEee
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
||||+|++++|+.||++||+|+|+|||++.||.++|+++||..+... ...+.|.+.+ .....+..+..++..+|||+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD-DLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHH-HSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccc-hhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999754321 2234444444 25566778889999999999
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHH
Q 002172 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~g 639 (956)
+|+||..+|+.||++|++|+|+|||+||+|||++|||||+|++|+++|+++||++|++++|+.++++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=1e-30 Score=249.84 Aligned_cols=125 Identities=35% Similarity=0.505 Sum_probs=109.7
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhh
Q 002172 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (956)
Q Consensus 482 ~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 561 (956)
+..+.++++|++|+|++++|+.|+++||+++|+|||+..+|.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 345578999999999999999999999999999999999999999999983
Q ss_pred cceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 562 ~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.+|++++|++|.++|+.+|+. ++|+|+|||.||+|||++|||||+|++++++++++||++|++++|+.|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 479999999999999999975 68999999999999999999999999999999999999999999999999873
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=1.3e-30 Score=294.50 Aligned_cols=313 Identities=10% Similarity=-0.022 Sum_probs=210.4
Q ss_pred ccchhhhhcCceEEeeccccceeeCceeEEeeeee-----eccCCCCHH-HHHHHHHHhc---c-ccccChHHHHHHHhc
Q 002172 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE-----IFAKGVDAD-AVVLMAARAS---R-VENQDAIDAAIVGML 386 (956)
Q Consensus 317 ~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~-----~~~~~~~~~-~~l~~aa~~~---~-~~~~~~i~~ai~~~~ 386 (956)
-+.+.|.||..+++|+|||||+|.|+|++....-+ ....+.+.+ ++....+.+. . ....++...+++...
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQD 108 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCS
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 35667999999999999999999999987532100 001122222 2221111111 1 122334444544433
Q ss_pred CChH----HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEE
Q 002172 387 ADPK----EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSL 462 (956)
Q Consensus 387 ~~~~----~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~Rvl 462 (956)
.... ..+..+.....+||++.+|+|++.....++.+..+.||+++.+. ..+....++.+.+..++++|+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l 184 (380)
T d1qyia_ 109 EPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEW 184 (380)
T ss_dssp SCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHH
T ss_pred hhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHH
Confidence 2221 22455667778999999999987654333333444566666542 112223445667788999999999
Q ss_pred EEEEeecCCCCccCCCCCceEEEEeccCCCCC--ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc
Q 002172 463 AVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR--HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540 (956)
Q Consensus 463 avA~~~l~~~~~~~~e~~l~~lGli~~~D~lR--~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~ 540 (956)
++|++..+..+. ....++...|++..+||+| +|++++++.|+++||++.|+|||+..+|..+++++||........+
T Consensus 185 ~~~~~~~~~~~~-~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i 263 (380)
T d1qyia_ 185 YLGSKLYEDVEK-KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI 263 (380)
T ss_dssp HHHHHHHHHHHC-SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGE
T ss_pred HHhhhccccccc-ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceE
Confidence 999876532211 1222345579999999955 5999999999999999999999999999999999999642212222
Q ss_pred ccCCccc--------cccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCC---eeEEe
Q 002172 541 LLGQNKD--------ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAV 609 (956)
Q Consensus 541 l~g~~~~--------~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad---VGIam 609 (956)
+++.+.. ......+-.+.+..+.+++|++|+||..+|+.++..++.|+|||||+||+||+|+|| |||+|
T Consensus 264 ~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~ 343 (380)
T d1qyia_ 264 ATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLT 343 (380)
T ss_dssp ECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred EecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEec
Confidence 2222110 000111222345555678999999999999999999999999999999999999999 99999
Q ss_pred c-cccHHHhh----ccceeecCCChhHHHHHH
Q 002172 610 A-DATDAARS----ASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 610 g-~gtd~Ak~----aADivL~~~~~~~iv~ai 636 (956)
| .|++++++ .||+|+ +++..+...+
T Consensus 344 G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 344 GLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp BTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 9 77776655 799999 6677776554
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=1.2e-25 Score=207.53 Aligned_cols=97 Identities=39% Similarity=0.591 Sum_probs=88.8
Q ss_pred cEEEEECCeE--EEEeccCcCCCcEEEEeCCCeeecceEEee--cCCceeeccccCCcCeeeecCC-------------C
Q 002172 135 KSKVLRDGKW--MEEDAAILVPGDIISVKLGDIIPADARLLE--GDPLKIDQSALTGESLPVTKGP-------------G 197 (956)
Q Consensus 135 ~~~V~RdG~~--~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~--g~~l~VDeS~LTGES~pv~K~~-------------g 197 (956)
.++|+|+|++ ++|+++||||||+|.|++||+|||||+|++ +.++.||||+|||||.|+.|.+ .
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5899999985 789999999999999999999999999986 4457899999999999999975 3
Q ss_pred CccccCCeeccCcEEEEEEEecchhHHHhHHHhh
Q 002172 198 DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (956)
Q Consensus 198 ~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~ 231 (956)
+.+|+||.|.+|+++++|++||.+|++|||++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999998764
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.80 E-value=2.8e-19 Score=184.71 Aligned_cols=122 Identities=24% Similarity=0.337 Sum_probs=98.6
Q ss_pred cChHHHHHHHhc----CChHHHhhccceeEeecCCCCCcceEEEEEcC--CCcEEEEEeCcHHHHHHhhcC---------
Q 002172 375 QDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDS--EGKMHRVSKGAPEQILNLVRN--------- 439 (956)
Q Consensus 375 ~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~--~g~~~~~~KGa~e~il~~~~~--------- 439 (956)
+||.|.|++.++ .+....+..+++++.+||+|.+|||+++++.+ ++++++|+|||||.|+++|+.
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 589999998764 34566788899999999999999999999854 456788999999999999973
Q ss_pred -chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC-----------ccCCCCCceEEEEeccCCCCCcc
Q 002172 440 -KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR-----------KESSGGPWQFIGLMPLFDPPRHD 496 (956)
Q Consensus 440 -~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~-----------~~~~e~~l~~lGli~~~D~lR~~ 496 (956)
+++.++.+.+.+++|+.+|+||||+||+.++.++ .+..|++|+|+|+++|+||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 4677889999999999999999999999987543 23457899999999999999985
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.55 E-value=1.5e-15 Score=159.16 Aligned_cols=97 Identities=20% Similarity=0.369 Sum_probs=81.0
Q ss_pred hhccceeEeecCCCCCcceEEEEEcCCC-----cEEEEEeCcHHHHHHhhcC----------chHHHHHHHHHHHHH--H
Q 002172 393 RANIQEVHFLPFNPTDKRTALTYIDSEG-----KMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKF--A 455 (956)
Q Consensus 393 ~~~~~~l~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~--a 455 (956)
+..+++++.+||||++|||+++++.+++ .+.+|+|||||.|+++|+. .++.++.+.+.++++ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 5678899999999999999999986554 3578999999999999973 356777888888886 6
Q ss_pred HcCCeEEEEEEeecCCCCc----------cCCCCCceEEEEecc
Q 002172 456 ERGLRSLAVAYQEVPDGRK----------ESSGGPWQFIGLMPL 489 (956)
Q Consensus 456 ~~G~RvlavA~~~l~~~~~----------~~~e~~l~~lGli~~ 489 (956)
++|+||||+|||+++..+. +..|++|+|+|+++|
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999975432 235789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.15 E-value=5.3e-11 Score=121.66 Aligned_cols=148 Identities=23% Similarity=0.220 Sum_probs=104.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--Ccc-ccC------Ccccc--------------
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSA-LLG------QNKDE-------------- 548 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~-l~g------~~~~~-------------- 548 (956)
.+.+.+.++|++|+++|++++++||.....+...++.+++...... ... ... ...+.
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4778999999999999999999999999999999999988532110 000 000 00000
Q ss_pred -------------------ccCcccHHHHhhhcc---------eEEee--ChhhHHHHHHHHhhC----CCEEEEEcCCc
Q 002172 549 -------------------SIVALPVDELIEKAD---------GFAGV--FPEHKYEIVKRLQAR----KHICGMTGDGV 594 (956)
Q Consensus 549 -------------------~~~~~~~~~~~~~~~---------vfar~--~Pe~K~~iV~~lq~~----g~~V~m~GDGv 594 (956)
......+.+++++.. .+..+ ....|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000111233333221 11222 334677777665443 45699999999
Q ss_pred cChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHH
Q 002172 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (956)
Q Consensus 595 NDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~g 639 (956)
||.|||+.|++||||+++++.+|++||+|+..++...++++|++-
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999998888654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.07 E-value=3.6e-10 Score=115.86 Aligned_cols=148 Identities=20% Similarity=0.171 Sum_probs=103.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccCCc--ccc------------------
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQN--KDE------------------ 548 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~--~~~------------------ 548 (956)
.++.+++.+++++|++.|++++++||.+...+..++..+|+...... ...+...+ ...
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999998542110 00000000 000
Q ss_pred -----------------ccCcccHHHHhh---hc--ce-----EEeeCh--hhHHHHHHHHhhC----CCEEEEEcCCcc
Q 002172 549 -----------------SIVALPVDELIE---KA--DG-----FAGVFP--EHKYEIVKRLQAR----KHICGMTGDGVN 595 (956)
Q Consensus 549 -----------------~~~~~~~~~~~~---~~--~v-----far~~P--e~K~~iV~~lq~~----g~~V~m~GDGvN 595 (956)
.......+.+.. .. .+ +..+.| ..|...++.+.+. ...|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 000111111111 11 11 223334 4788888766543 234888999999
Q ss_pred ChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHH
Q 002172 596 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 596 DapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
|.||++.|++||||++|.+.+++.||+|...++...|.+++++
T Consensus 179 D~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred hHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999999999999999999999999888753
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.00 E-value=4.8e-10 Score=110.65 Aligned_cols=107 Identities=24% Similarity=0.302 Sum_probs=84.7
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHH
Q 002172 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (956)
Q Consensus 499 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~ 578 (956)
.+|+.|++.|+.+.++||++...+...++++++.. ++.. ..+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~--~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------cccc--cccHHHHHH
Confidence 47999999999999999999999999999998842 1222 234444444
Q ss_pred HHh----hCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHHH
Q 002172 579 RLQ----ARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVL 637 (956)
Q Consensus 579 ~lq----~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai~ 637 (956)
.+. -....|+++|||.||.|+|+.|++|+||++|.+.+|+.||+|+..++ +..+.+.|.
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il 153 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMIL 153 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHH
Confidence 433 23467999999999999999999999999999999999999998876 444444443
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=2.7e-10 Score=116.63 Aligned_cols=126 Identities=17% Similarity=0.147 Sum_probs=90.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.|+.||+.|++++++||.....+..+++.+|+......+..+... .+....... ....-..+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~-~~G~~~g~~--------~~~p~~~~~ 152 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY-FNGEYAGFD--------ETQPTAESG 152 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC-TTSCEEEEC--------TTSGGGSTT
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeee-ehhccccce--------eeeeeeccc
Confidence 47899999999999999999999999999999999999996321100000000 000000000 000113467
Q ss_pred hHHHHHHHHhhC--CCEEEEEcCCccChhhhccCCeeEEec--cccHHHhhccceeecC
Q 002172 572 HKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA--DATDAARSASDIVLTE 626 (956)
Q Consensus 572 ~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~AdVGIamg--~gtd~Ak~aADivL~~ 626 (956)
.|.++++.++++ -..|.|+|||.||.+|++.|++|||++ ......++.||.++.+
T Consensus 153 ~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 153 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred hHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 899999999864 236899999999999999999999997 3455666789999843
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.97 E-value=1.6e-10 Score=118.31 Aligned_cols=148 Identities=14% Similarity=0.063 Sum_probs=107.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+....+......+.+... ..........+++..|+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~------~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH------IDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE------EECTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcce------eccccccccccccCCHH
Confidence 578999999999999999999999999999999999998754321111111100000 00000011245678899
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHh-hccceeecCCChhHHHHHHHHHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR-SASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak-~aADivL~~~~~~~iv~ai~~gR~~~~~i 646 (956)
.|..+++.++..++.|.|+||+.||.+|+++||+++|++...+.++ +..+++- -++|+.|...+.+-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999986555544 4444433 468999988886655555444
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.82 E-value=5.3e-09 Score=109.74 Aligned_cols=71 Identities=21% Similarity=0.207 Sum_probs=59.2
Q ss_pred eeChh--hHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 567 GVFPE--HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 567 r~~Pe--~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..+|. .|...|+.+.+. ...++++|||.||.+||+.|+.|+||++|.+..|+.||+|...++=..+.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34554 598888888764 234889999999999999999999999999999999999988776677777764
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.74 E-value=1.8e-08 Score=100.26 Aligned_cols=130 Identities=16% Similarity=0.168 Sum_probs=94.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+..++....++.+ +.+.++..+|+.............++..... ..+..... ..........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~-------------~~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLC--HKLEIDDS-------------DRVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEE--EEEEECTT-------------SCEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhc--ceeeeecc-------------cccccccccchh
Confidence 4556677777665 5789999999999999999999988753210 00000000 001123445566
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
.+...++.++....-|.|+|||.||.|||+.|++||||+...++.++++|++.. .++..++.++..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 777888888888999999999999999999999999997667788888898774 567888877643
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.72 E-value=1.2e-08 Score=107.74 Aligned_cols=71 Identities=23% Similarity=0.291 Sum_probs=60.1
Q ss_pred eeChh--hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 567 GVFPE--HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 567 r~~Pe--~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.++|. .|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|++.+++.||+|...++-..+.++++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 35554 798888888654 2 35899999999999999999999999999999999999998777777877774
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.71 E-value=8.7e-09 Score=102.87 Aligned_cols=136 Identities=21% Similarity=0.188 Sum_probs=94.0
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.+++.+.++.++..|..+.++||.....+....++.+...... ..+............ .....+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA--NRLIVKDGKLTGDVE-------GEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEE-------CSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh--hhhcccccccccccc-------cccccccccc
Confidence 4788899999999999999999999999999999999887742110 000000000000000 0000111112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
.-...+.+.++-..+.|.++|||.||.||++.|++|||| ++.+..++.||+|+-.+++..|+.+|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 333444445554556689999999999999999999999 78899999999999888888887654
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=8.6e-09 Score=108.04 Aligned_cols=72 Identities=21% Similarity=0.243 Sum_probs=60.9
Q ss_pred EeeChh--hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 566 AGVFPE--HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 566 ar~~Pe--~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
-.++|. .|..-++.|+++ | ..|.++|||.||.|||+.|+.|+||++|++..|+.||+|+..++-.++..+|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 456664 499888888664 3 34889999999999999999999999999999999999998878777777774
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.56 E-value=2.4e-08 Score=104.20 Aligned_cols=73 Identities=26% Similarity=0.279 Sum_probs=60.4
Q ss_pred EeeChh--hHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHH
Q 002172 566 AGVFPE--HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 566 ar~~Pe--~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
..+.|. .|..-++.|.++ ...++++|||.||.+||+.|+.||||++|++.+|+.||+|...++-..+.+++++
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 344554 588888777653 3458889999999999999999999999999999999999887777888888753
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.50 E-value=7.5e-08 Score=100.97 Aligned_cols=65 Identities=28% Similarity=0.313 Sum_probs=50.9
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChh-HHHHHH
Q 002172 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS-VIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~-~iv~ai 636 (956)
.|..-++.+.+. ...|+++|||.||.+||+.|++|+||++|.+.+|+.||+|+..++-. .+..++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l 276 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLL 276 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHH
Confidence 465555555442 34699999999999999999999999999999999999999755433 344444
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.46 E-value=2.9e-07 Score=96.14 Aligned_cols=71 Identities=24% Similarity=0.287 Sum_probs=59.6
Q ss_pred eeChh--hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002172 567 GVFPE--HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 567 r~~Pe--~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.++|. .|..-|+.+.+. | ..|+++|||.||.|||+.|++||||++|++.+|+.||+|+.+++-..+..+|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45564 588888777553 2 24788999999999999999999999999999999999998888888887774
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.26 E-value=1.1e-06 Score=90.21 Aligned_cols=69 Identities=19% Similarity=0.157 Sum_probs=55.7
Q ss_pred hhhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccc-------eeecCCChhHHHHHHHH
Q 002172 570 PEHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVLT 638 (956)
Q Consensus 570 Pe~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD-------ivL~~~~~~~iv~ai~~ 638 (956)
...|...++.+.+. | ..|.++|||.||.|||+.|+.|++|+++.+..++.|| ++-..++...|.+++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 45799988888765 2 3488899999999999999999999999999999988 45555556677777643
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.23 E-value=1.3e-06 Score=88.99 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=39.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (956)
.+.-.+.++++|++|+++|+++++.||.+...+..+.+.+|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34455789999999999999999999999999999999999853
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.02 E-value=1.5e-05 Score=79.87 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=38.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
.+-+.++++|++|++.|+.++++||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46688999999999999999999999999999999999984
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.81 E-value=2.3e-05 Score=72.96 Aligned_cols=121 Identities=20% Similarity=0.317 Sum_probs=85.1
Q ss_pred CCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHH---hhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHH
Q 002172 355 KGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEA---RANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPE 431 (956)
Q Consensus 355 ~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~---~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e 431 (956)
.|.+.++++.+|+.++..+ .||+..||+.++.+.... ..........||....+...+. .+|+ .+.+|++.
T Consensus 11 ~G~~~~ell~~AA~aE~~S-eHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g~--~v~~G~~~ 84 (136)
T d2a29a1 11 QGVDEKTLADAAQLASLAD-ETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDNR--MIRKGSVD 84 (136)
T ss_dssp TTCCHHHHHHHHHHHHHTC-CSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETTE--EEEEECHH
T ss_pred CCCCHHHHHHHHHHHhCCC-CchHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECCE--EEEecHHH
Confidence 5899999999999887654 479999999986432110 1223344556676665443332 2564 55679998
Q ss_pred HHHHhhcCc-hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCC
Q 002172 432 QILNLVRNK-SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR 494 (956)
Q Consensus 432 ~il~~~~~~-~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR 494 (956)
.+.+.+... ..+...+.+.+++++.+|..++.+|... +++|++++.|++|
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 776654321 1234567788899999999999999765 8999999999987
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.59 E-value=4.8e-05 Score=76.51 Aligned_cols=125 Identities=13% Similarity=0.149 Sum_probs=83.1
Q ss_pred CCCccHHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 492 PPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++-||+.+++++|++.| +++.++|+.....+..+-+..|+..- -...+.+.+... ..-.|
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~-----------------~k~~p 151 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY--FPFGAFADDALD-----------------RNELP 151 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT--CSCEECTTTCSS-----------------GGGHH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccc--cccccccccccc-----------------ccchh
Confidence 44689999999999987 89999999999999999999999632 111222211100 00012
Q ss_pred hhHHHHHHHHhhC---CCEEEEEcCCccChhhhccCCee---EEecc--ccHHHhhccceeecCCChhHHHHHHH
Q 002172 571 EHKYEIVKRLQAR---KHICGMTGDGVNDAPALKKADIG---IAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 571 e~K~~iV~~lq~~---g~~V~m~GDGvNDapALk~AdVG---Iamg~--gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
+--...++.+... .+.+.|+||+.+|..|-+.|++- |+-|. ..+..+..+|+++ ++++.+...+.
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 2223344444332 35799999999999999999954 44442 2334555689998 67887777663
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.49 E-value=0.00027 Score=73.97 Aligned_cols=131 Identities=11% Similarity=0.076 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe----
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG---- 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar---- 567 (956)
++|+|+++.++.|++.|+.+.++||--......+.+++|+..+.. .++ ....+- ++. .+..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni--~I~-sN~l~f--~~~---------~~~~~~~~~ 200 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV--KVV-SNFMDF--DEN---------GVLKGFKGE 200 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE--EEE-EECEEE--CTT---------SBEEEECSS
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc--eEE-eeEEEE--eCC---------eeEeeccCC
Confidence 589999999999999999999999999999999999999864311 011 000000 000 00000
Q ss_pred -eChhhHHHHH----H--HHhhCCCEEEEEcCCccChhhhcc---CCeeEEec--c-----ccHHHhhccceeecCCChh
Q 002172 568 -VFPEHKYEIV----K--RLQARKHICGMTGDGVNDAPALKK---ADIGIAVA--D-----ATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 568 -~~Pe~K~~iV----~--~lq~~g~~V~m~GDGvNDapALk~---AdVGIamg--~-----gtd~Ak~aADivL~~~~~~ 630 (956)
.....|...+ . ..++....|.++|||+||.+|.+. ++.++++| . .-+.=.++-||||.+|.--
T Consensus 201 ~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~ 280 (291)
T d2bdua1 201 LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESL 280 (291)
T ss_dssp CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBC
T ss_pred ccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCCh
Confidence 0112232221 1 122234578899999999999874 45555554 2 1122346789999988766
Q ss_pred HHHHHH
Q 002172 631 VIISAV 636 (956)
Q Consensus 631 ~iv~ai 636 (956)
.++..+
T Consensus 281 ~v~~~i 286 (291)
T d2bdua1 281 EVVNSI 286 (291)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 666555
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.41 E-value=6e-05 Score=75.06 Aligned_cols=124 Identities=17% Similarity=0.127 Sum_probs=87.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++++.++.|++.|+++.++||.....+..+.+++|+... ....+...+.. ...-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~-----------------~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSLP-----------------EIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTSS-----------------SCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhh--ccccccccccc-----------------cccccch
Confidence 4679999999999999999999999999999999999998532 11222211111 1112245
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEecc----ccHHHhhccceeecCCChhHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~----gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
--..+.+.++-....+.|+||..+|..+-++|++ .|.+.. ..+.....+|+++ ++++.++.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 4556666676667789999999999999999987 444432 2234455689888 5677666543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.31 E-value=0.00026 Score=72.27 Aligned_cols=126 Identities=13% Similarity=0.139 Sum_probs=87.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++.|+++.++||.+...+..+-+++|+..-. ....+.+.+.. ...-.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~~-----------------~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP-----------------AGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-ccccccccccc-----------------ccccChH
Confidence 67899999999999999999999999999999999999885321 11222221110 1122344
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCee-EEeccccH---------------------------HHhhccce
Q 002172 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG-IAVADATD---------------------------AARSASDI 622 (956)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd---------------------------~Ak~aADi 622 (956)
.=....+.+.-. .+.|.|+||..+|..+=++|++- |++..|.. ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCE
Confidence 556666666643 46799999999999999999973 44543320 11123899
Q ss_pred eecCCChhHHHHHHH
Q 002172 623 VLTEPGLSVIISAVL 637 (956)
Q Consensus 623 vL~~~~~~~iv~ai~ 637 (956)
|+ +++..+..+|.
T Consensus 241 vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 241 TI--ETMQELESVME 253 (257)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred EE--CCHHHHHHHHH
Confidence 99 66888777764
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.29 E-value=0.00015 Score=71.93 Aligned_cols=119 Identities=17% Similarity=0.196 Sum_probs=83.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..- -..++.+.+.. .+.-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~--F~~i~~~~~~~-----------------~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP-----------------YSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS-----------------CCTTSTH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc--ccccccccccc-----------------cchhhHH
Confidence 4569999999999999999999999999999999999999531 22233322211 1222234
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecc--c-cHHHhhccceeecCCChhH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVAD--A-TDAARSASDIVLTEPGLSV 631 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~--g-td~Ak~aADivL~~~~~~~ 631 (956)
-=..+++.+.-....++|+||..+|..|-+.|++. |++.. . .+.-...||+++ ++|..
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~e 210 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTE 210 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGG
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhh
Confidence 44566777766667899999999999999999975 34432 1 222234678887 44554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.13 E-value=0.00021 Score=70.96 Aligned_cols=58 Identities=10% Similarity=0.219 Sum_probs=43.5
Q ss_pred EeeCh--hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecC
Q 002172 566 AGVFP--EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626 (956)
Q Consensus 566 ar~~P--e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~ 626 (956)
-.+.| -+|..-++.|.++.. +.++||+.||.+|++.|+-|+||+.|. ++.+|++++.+
T Consensus 151 idi~p~g~~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred EEEecCCCCHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC
Confidence 34444 369999999988755 567899999999999997776665332 25678888854
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.79 E-value=0.00046 Score=67.87 Aligned_cols=120 Identities=10% Similarity=0.027 Sum_probs=84.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+.++.++..+ ++.++|+.....+..+.+++|+... -..++.+.+ .....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~--fd~v~~~~~-------------------~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHF--FDGIYGSSP-------------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECS-------------------SCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccc--ccccccccc-------------------ccccccc
Confidence 56789999999998765 8999999999999999999998532 111221111 1233455
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEe--c--cccHHHhhccceeecCCChhHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV--A--DATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam--g--~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
.-..+.+.++-....+.|+||+.||..|-++|++ .|++ | ...+.....+|+++ +++..++..
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 5556666666556679999999999999999997 4555 3 22344445589998 557766653
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.00062 Score=67.73 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=45.3
Q ss_pred hHHHHHHHHhhC-CCEEEEEcC----CccChhhhccCC-eeEEeccccHHHhhccceee
Q 002172 572 HKYEIVKRLQAR-KHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVL 624 (956)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~m~GD----GvNDapALk~Ad-VGIamg~gtd~Ak~aADivL 624 (956)
.|..-++.|.+. ..-|.++|| |-||.+||+.|. .|+||+++.|..|..+|++|
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 577777777654 457899999 569999999996 79999999999999999886
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.29 E-value=0.0044 Score=61.61 Aligned_cols=124 Identities=17% Similarity=0.161 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+|.||+.++++.|+ .|+++.++|+........+.+.+|+... . ..++...+. ....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~-----------------~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-F-DSITTSEEA-----------------GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-C-SEEEEHHHH-----------------TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-c-ccccccccc-----------------cccchhhH
Confidence 57899999999997 5899999999888889999999998522 1 111111000 01111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCC-ccChhhhccCCeeEE-ec--cccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIA-VA--DATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDG-vNDapALk~AdVGIa-mg--~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
-=..+.+.+.-....+.|+||. .||..+-++|++-.. +. .......+.+|+++ ++++.++..++
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 2233445554444569999997 699999888887532 32 22333445789988 55888887775
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.01 E-value=0.011 Score=56.83 Aligned_cols=134 Identities=17% Similarity=0.157 Sum_probs=77.8
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChH---------------HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHH
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDE 557 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 557 (956)
+-|++.++++.|+++|+++.++|.-... -........|+.... ..+.....+. ....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~cp~~p~~-----~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG---IYYCPHHPQG-----SVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCBTTC-----SSGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc---eeeccccccc-----cccc
Confidence 4489999999999999999999986521 011111222221110 0000000000 0000
Q ss_pred HhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee--EEeccc---cHHHhhccceeecCCChhHH
Q 002172 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVADA---TDAARSASDIVLTEPGLSVI 632 (956)
Q Consensus 558 ~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iamg~g---td~Ak~aADivL~~~~~~~i 632 (956)
..+...+..=.|.-=..+.+.+.-.-..+.||||..+|..|=++|+++ +.+..| .+.....||+|+ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000001122234444566677765556789999999999999999985 444332 345556799998 778888
Q ss_pred HHHHH
Q 002172 633 ISAVL 637 (956)
Q Consensus 633 v~ai~ 637 (956)
++.|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88774
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.80 E-value=0.0012 Score=64.74 Aligned_cols=120 Identities=8% Similarity=0.056 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++ ++++.++|+-....+..+.+++|+... ...++.+.+.. ...-.|+
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~-----------------~~KP~p~ 141 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDTP-----------------KRKPDPL 141 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGSS-----------------CCTTSSH
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccc--ccccccccccc-----------------cchhhhh
Confidence 466899999999974 799999999999999999998887531 11111111100 1111244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe---ccccHHHhhccceeecCCChhHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVII 633 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam---g~gtd~Ak~aADivL~~~~~~~iv 633 (956)
--..+++.++-....|.|+||..+|..+-++|++.... |..+....+.+|.++ +++..|+
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 44556666654446789999999999999999887553 333444455778887 4565544
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.75 E-value=0.0025 Score=62.10 Aligned_cols=118 Identities=17% Similarity=0.086 Sum_probs=76.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+... .+..+-+++|+... -..++...+. ....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~--f~~i~~s~~~-----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY--FTEILTSQSG-----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG--EEEEECGGGC-----------------CCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc--cccccccccc-----------------cccchhHH
Confidence 4679999999999999999999998554 45667788998532 1111111100 01112344
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccccHHHhhccceeecCCChhHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
-=..+.+.+.-....|.||||+.+|..+-++|++- |++..++. .+|..+ +++..+...
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHH
Confidence 44566666665566899999999999999999985 44554432 344444 335554443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.69 E-value=0.0039 Score=58.90 Aligned_cols=94 Identities=13% Similarity=0.039 Sum_probs=65.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee--
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV-- 568 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~-- 568 (956)
++.|++.++++.|++.|+++.++|+-+ ...+...-+..++... ... +.+.-
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~--~~~------------------------~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKY--FIQ------------------------REIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGG--CSE------------------------EEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccc--cee------------------------eecccCC
Confidence 578999999999999999999999654 4666666677666321 000 11111
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecc
Q 002172 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVAD 611 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~ 611 (956)
.|+.-.++.+.+.-..+.+.|+||..+|..+-++|++- |.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 24444556666665667899999999999999999773 34433
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.47 E-value=0.006 Score=60.52 Aligned_cols=101 Identities=17% Similarity=0.054 Sum_probs=69.6
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
-.+.||+.+++++|++.|+++.++|+..........+.+|+..-. +...... +. .....-.|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~---d~--------------~~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHF---DT--------------KIGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEE---CG--------------GGCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceee---cc--------------ccccCCCc
Confidence 467899999999999999999999999999988888888874211 0000000 00 00111123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
+-=....+.+.-....|+|+||..+|+.+-++|++-...
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~ 226 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAV 226 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEE
Confidence 333445555555566799999999999999999985443
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.97 E-value=0.018 Score=55.00 Aligned_cols=109 Identities=13% Similarity=0.051 Sum_probs=70.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+++.++.|++.|+++.++|+-+..+. ++-+.+|+... ...++.+.+... ..-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~--fd~i~~~~~~~~-----------------~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY--FTEVVTSSSGFK-----------------RKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG--EEEEECGGGCCC-----------------CTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc--cccccccccccc-----------------cCCCHH
Confidence 5679999999999999999999999766554 46678887531 112222211110 011233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccce
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi 622 (956)
--..+.+.+.- ..+.|+||..+|..|-++|++=...-++.+-.++.-||
T Consensus 139 ~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 33444455543 34889999999999999998774433555556666553
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.81 E-value=0.029 Score=55.77 Aligned_cols=124 Identities=11% Similarity=0.103 Sum_probs=80.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++ |+++.++|+.........-+++|+..- -..++.+.+.. .+.-.|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~~-----------------~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY--FDAIVIGGEQK-----------------EEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGSS-----------------SCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc--ccccccccccc-----------------cchhhhh
Confidence 467999999999985 899999999999999998999998532 11222211110 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCee-EEec--c--ccHHHhhccceeecCCChhHHHHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVA--D--ATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVG-Iamg--~--gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
==..+.+.+.-....|.|+||.. +|..+-+.|++. +..- . ..+.....+|+++ +++..+...++
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 22344455544445689999996 899999999996 5432 1 1222333578888 55887777764
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.69 E-value=0.016 Score=56.61 Aligned_cols=91 Identities=19% Similarity=0.264 Sum_probs=65.0
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCC----hHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~----~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
+.|++.+.++.+++.|++|+.|||.. ..|+++.-+.+|++........+.+.+.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~---------------------- 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP---------------------- 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT----------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC----------------------
Confidence 56899999999999999999999965 3577888788999654322222322211
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEe
Q 002172 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV 609 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam 609 (956)
..+.|.+.|+. -.+++++||..+|..|-++|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11335555553 3589999999999999998885 4554
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.50 E-value=0.1 Score=45.67 Aligned_cols=104 Identities=15% Similarity=0.205 Sum_probs=65.6
Q ss_pred CCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHH
Q 002172 356 GVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILN 435 (956)
Q Consensus 356 ~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~ 435 (956)
+.++++++.+++..... +.||+..|++.++.+........+..+..| .+ .+ .|+. +.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~-S~HPlA~AIv~~a~~~~~~~~~~~~~~~~~-----G~-Gi-----~g~~--v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERR-SEHPIAEAIVKKALEHGIELGEPEKVEVIA-----GE-GV-----VADG--ILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTT-CCSHHHHHHHHHHHTTTCCCCCCSCEEEET-----TT-EE-----EETT--EEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCc-CCCchHHHHHHHHHHhcCCCCccccceeec-----cc-eE-----EeEE--EEECcHHHHHh
Confidence 34788888888777554 457999999988754221111111222221 00 11 1121 34599998776
Q ss_pred hhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEecc
Q 002172 436 LVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPL 489 (956)
Q Consensus 436 ~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~ 489 (956)
..-. +.+.+.+.++.+..+|..++.++... +++|++++
T Consensus 75 ~~~~---~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FGVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TTCC---CCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cCCC---CCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 4322 23456678889999999999999865 89999875
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.09 E-value=0.012 Score=54.07 Aligned_cols=95 Identities=13% Similarity=0.020 Sum_probs=60.9
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChH----HHHHHHH------H-hCCCCCCCCCccccCCccccccCcccHHHH
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGR------R-LGMGTNMYPSSALLGQNKDESIVALPVDEL 558 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~----tA~~ia~------~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 558 (956)
+|+|.|++.+.++.|++.|+++.++||-... |...+.. . .+... ..+....
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~~------------- 95 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQRE------------- 95 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECC-------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE-----EEeeccc-------------
Confidence 5789999999999999999999999997632 1111111 0 01100 0000000
Q ss_pred hhhcceEEeeChhhHHHHHHHHhhCC-CEEEEEcCCccChhhhccCCee
Q 002172 559 IEKADGFAGVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 559 ~~~~~vfar~~Pe~K~~iV~~lq~~g-~~V~m~GDGvNDapALk~AdVG 606 (956)
.--.|-.++-|..+.+.+...+ .+++|+||-..|+.|.+++++=
T Consensus 96 ----~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 96 ----QGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ----TTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ----ccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 0001223567788887776654 4678899999999999998774
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=92.96 E-value=0.04 Score=53.62 Aligned_cols=111 Identities=7% Similarity=-0.009 Sum_probs=70.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++-||+.+.++.|++.|+++.++|+... +...-+..|+... -..++.+.+.. ...-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~--f~~i~~~~~~~-----------------~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY--FDAIADPAEVA-----------------ASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG--CSEECCTTTSS-----------------SCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccc--ccccccccccc-----------------ccccCh
Confidence 45778999999999999999999999765 4566777887532 11122221110 111122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEeccccHHHhhccceee
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVL 624 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~aADivL 624 (956)
+-=....+.++-..+.|.|+||..+|..|-+.|++ .|+++.+.+ ...++.++
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~--~~~~~~~~ 201 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPED--LGDDIVIV 201 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHH--HCSSSEEE
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhh--cccccEEc
Confidence 22233444554445568999999999999999987 455654432 23455555
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.43 E-value=0.081 Score=51.36 Aligned_cols=122 Identities=8% Similarity=0.067 Sum_probs=77.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh-
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P- 570 (956)
.+.+++.+.+++|+ .+..++|+-....+..+-+++|+.... ......+.+.. ..+..|
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~-----------------~~~~KP~ 143 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG-----------------ADRVKPK 143 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC-----------------TTCCTTS
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccc-ceeeccccccc-----------------ccccccC
Confidence 46788888887765 456789999999999999999986321 11111111000 011223
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecccc--------HHHhhccceeecCCChhHHHHHH
Q 002172 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT--------DAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 -e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gt--------d~Ak~aADivL~~~~~~~iv~ai 636 (956)
+.=....+.+.-..+.+.|+||..+|..+=+.|++- |++..|. +....-+|+++ +++..+..++
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll 217 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 217 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 222445555555556799999999999999999974 4554332 12333489999 5577776655
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.40 E-value=0.058 Score=54.05 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=28.8
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002172 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (956)
=|++.++|++|+++|++++.+|+....+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378999999999999999999987755555555543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.39 E-value=0.12 Score=50.53 Aligned_cols=138 Identities=14% Similarity=0.192 Sum_probs=90.9
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCcccc-ccC--------------------
Q 002172 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDE-SIV-------------------- 551 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~-~~~-------------------- 551 (956)
+-||+.++++.+++. ....++|---.+-..++|+.+|++.+.+.. .-++|. ...
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T----~~~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGT----EVDFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEE----BCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecc----cccccccCCChHHHHHHHHHhhhccCccHH
Confidence 347999999999865 467778878888899999999997432111 111110 000
Q ss_pred -----------cccHHHHhhhcceEEeeChhhHHHHHHHHhhC-C-CEEEEEcCCccChhhhccCCe--eEEec-cccHH
Q 002172 552 -----------ALPVDELIEKADGFAGVFPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKKADI--GIAVA-DATDA 615 (956)
Q Consensus 552 -----------~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~-g-~~V~m~GDGvNDapALk~AdV--GIamg-~gtd~ 615 (956)
..+..++++++.... -..|..+++..-+. + ..-+.+||.+.|..+|+.|.= |+|++ +|.+=
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y 233 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY 233 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH
T ss_pred HHHHHHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccc
Confidence 011122222222222 25666666544321 2 123789999999999999854 89998 99999
Q ss_pred HhhccceeecCCChhHHHHHHHH
Q 002172 616 ARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 616 Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
|-..||+++..++...+...+..
T Consensus 234 al~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 234 ALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp HHTTCSEEEECSSTHHHHHHHHH
T ss_pred cccccceEEeccchhHHHHHHHH
Confidence 99999999999988777666643
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.12 E-value=0.1 Score=50.40 Aligned_cols=108 Identities=10% Similarity=0.028 Sum_probs=69.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
.++|++.+.+++|++.|+++.++|+- ............|+..- -..++.+.+. ....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~--fd~i~~s~~~-----------------~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH--FDFLIESCQV-----------------GMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG--CSEEEEHHHH-----------------SCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh--hceeeehhhc-----------------cCCC
Confidence 46799999999999999999999962 23344444555555311 0111111000 0112
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEeccccHHHhh
Q 002172 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARS 618 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd~Ak~ 618 (956)
-.|+--....+.++-...-+.|+||..+|..+-++|++ +|-+.++.+...+
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHH
Confidence 23555566777777666678999999999999999997 5666665554443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=90.68 E-value=0.12 Score=49.79 Aligned_cols=122 Identities=8% Similarity=0.066 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
.+.+++.++++.+++.|+++.++|+-........-+..|+... ...++...+.. ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~--fd~~~~s~~~~-----------------~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG--FDHLLSVDPVQ-----------------VYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEESGGGT-----------------CCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccc--ccceeeeeeee-----------------ccccHHH
Confidence 4568999999999999999999999999988888888777421 11111111100 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE-ec---cccHHHhhccceeecCCChhHHHH
Q 002172 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VA---DATDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg---~gtd~Ak~aADivL~~~~~~~iv~ 634 (956)
-=..+.+.+.-....|+|+||..+|.-+=++|++--. +. ...+-....+|+++ ++|..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 3345556665555679999999999999999987743 42 11222234579888 56776654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=89.95 E-value=0.63 Score=46.13 Aligned_cols=61 Identities=28% Similarity=0.339 Sum_probs=41.7
Q ss_pred HHHHHHHhhCCCEEEEEcCCc-cChhhhccCCe-eEEeccc----cHHH--hhccceeecCCChhHHHHHH
Q 002172 574 YEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVADA----TDAA--RSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 574 ~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdV-GIamg~g----td~A--k~aADivL~~~~~~~iv~ai 636 (956)
....+.+.-..+.++||||.. ||..+-++|++ +|.+..| .+.- ...+|+++ +++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 445555544556799999996 59999999997 5666432 2221 12349999 6788888776
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=89.43 E-value=0.079 Score=51.82 Aligned_cols=41 Identities=27% Similarity=0.200 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEec
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVA 610 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg 610 (956)
|+-=.+..+.+.-.-..+.||||..+|..|=+.|++ +|.+.
T Consensus 132 p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 132 PGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp CHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred chhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 333345555555444568999999999999999998 56664
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=88.22 E-value=0.56 Score=45.55 Aligned_cols=124 Identities=14% Similarity=0.106 Sum_probs=78.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002172 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.+++.+++++|+ |+.+.++|..+...+...-+..|+... ...++.+.+.. .+.=.|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~--fd~v~~s~~~~-----------------~~KP~p 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAKR-----------------VFKPHP 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT-----------------CCTTSH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc--ccccccccccc-----------------ccCccH
Confidence 366789999999886 788999999999888888888887532 11222221111 111112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEec-cccH-------------------------HHhhcccee
Q 002172 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA-DATD-------------------------AARSASDIV 623 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg-~gtd-------------------------~Ak~aADiv 623 (956)
+-=...++.+.-..+-|.||||..+|.-+=++|++- |.+. .+.+ ......|++
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~ 230 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEE
Confidence 222344555554445699999999999999998864 3332 1110 001247899
Q ss_pred ecCCChhHHHHHHH
Q 002172 624 LTEPGLSVIISAVL 637 (956)
Q Consensus 624 L~~~~~~~iv~ai~ 637 (956)
+ +++..++.+|+
T Consensus 231 i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 231 V--PALGDLPRLVR 242 (245)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
Confidence 8 67888888774
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.67 E-value=0.095 Score=51.05 Aligned_cols=45 Identities=22% Similarity=0.324 Sum_probs=31.0
Q ss_pred HHHHHHHHhh-CCCEEEEEcC----CccChhhhccCC-eeEEeccccHHHh
Q 002172 573 KYEIVKRLQA-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAAR 617 (956)
Q Consensus 573 K~~iV~~lq~-~g~~V~m~GD----GvNDapALk~Ad-VGIamg~gtd~Ak 617 (956)
|..-++.|.+ ...-|.++|| |-||.+||+.|+ .|+++++..|+-+
T Consensus 186 Kg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~ 236 (243)
T d2amya1 186 KRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR 236 (243)
T ss_dssp GGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH
T ss_pred HHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHH
Confidence 4444444433 3467899999 889999999997 7888887666544
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.00 E-value=0.21 Score=47.60 Aligned_cols=104 Identities=11% Similarity=-0.009 Sum_probs=61.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChH----HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002172 492 PPRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~----tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
++.+++.+.++.|++.|+++.++|..... .........++.. +...++.+.+. ....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~--~fd~i~~s~~~-----------------~~~K 159 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM--HFDFLIESCQV-----------------GMVK 159 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT--TSSEEEEHHHH-----------------TCCT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHh--hccEEEecccc-----------------ccch
Confidence 36789999999999999999999975432 2222222223311 00111111000 0011
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEeccccH
Q 002172 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATD 614 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~gtd 614 (956)
-.|+-=..+++.+.-...-+.|+||...|..+-++|++ +|.+.++.+
T Consensus 160 P~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 160 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred hHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 12233244555555444568899999999999999999 666765544
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=83.36 E-value=0.51 Score=46.64 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=30.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHhCCC
Q 002172 490 FDPPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 532 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~---~~tA~~ia~~lGi~ 532 (956)
.+.+=|++.++|+.|+++|++++.+|+.. +....+.=+++|+.
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 34444789999999999999999999544 33333333456764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=82.70 E-value=0.61 Score=46.17 Aligned_cols=41 Identities=29% Similarity=0.298 Sum_probs=31.8
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcc-ChhhhccCCe-eEEec
Q 002172 570 PEHKYEIVKRLQARKHICGMTGDGVN-DAPALKKADI-GIAVA 610 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvN-DapALk~AdV-GIamg 610 (956)
|+--..+.+.+.-....|+||||..+ |..+-++|++ +|.+.
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 44445666666656668999999976 9999999999 77774
|